BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006396
         (647 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  935 bits (2417), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/655 (68%), Positives = 537/655 (81%), Gaps = 15/655 (2%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           MLA  YSR+ MVHDA+FV+ KMK+L+  VSIQTYNSLLYNLRH++IMWD+Y++IKVS TP
Sbjct: 184 MLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVSGTP 243

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           ++ YT+SIV+DGLC+QSR QDA+LF Q+T GKEF PSVVS N IMSRYCKLGF +VAK  
Sbjct: 244 QSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSF 303

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FC+MLK+GL PDA+SYNILIHGLCIAGSM EAL+  NDM  HG+EPD +TY+ILAKGF L
Sbjct: 304 FCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRL 363

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L  I+GAW +IQK+LIKG +P++VTYTVLICG+CQIGNVEE LKL + M+S GF+L++I+
Sbjct: 364 LGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIIS 423

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
            +VLL S+CKS ++D A  L  EMEA GL+PDL+TYS LI GLCKQ +V +AI LY +MC
Sbjct: 424 STVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMC 483

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           S RI PNS  HGAIL+GLCEK  I++ARMYFD LI SN   D++LYNIMIDGY+K GN  
Sbjct: 484 SNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTR 543

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EAV+LY+QL EK ISP+IVTFNSL+YGFC N K++ ARRLLDTIKLHGLEP+AVTYTT M
Sbjct: 544 EAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLM 603

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YCEEGN+Q LL LL EM+ KAIGPTH+TYTVVIKGLCKQWKLQE+ QLLEDM  +G+T
Sbjct: 604 NVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLT 663

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PDQ++YNTII++FCK +D+RKAFQL ++M LHNLEPTS TYNILI+G CV GDLK+AD L
Sbjct: 664 PDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNL 723

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
           LVSLQ   ++L K AYTTIIKAHCA+GDV KA+ +F QMVEKGFE+SIRDY+        
Sbjct: 724 LVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCK 783

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                  K FFCMMLS+G  PDQ++ EV+L AFHQ G L S FEL A MIKSG L
Sbjct: 784 RCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 239/480 (49%), Gaps = 25/480 (5%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W V  ++ + G+     T ++++ G C+    ++ +   +    + F+ +V++++ ++S 
Sbjct: 231 WDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSR 290

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP- 306
            CK G +D A      M   GL PD  +Y+ILI GLC    + +A+ L N+M +  + P 
Sbjct: 291 YCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPD 350

Query: 307 ----NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
               N  A G  LLGL     I  A      +++     ++V Y ++I G+ ++GN+ EA
Sbjct: 351 MVTYNILAKGFRLLGL-----INGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEA 405

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++LY+++I      SI++   L+   CK+ +V  A +L   ++ +GL P  +TY+T ++ 
Sbjct: 406 LKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHG 465

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C++G +Q+ + L ++M +  I P  + +  ++ GLC++ K+ +A    + +    ++ D
Sbjct: 466 LCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLD 525

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            I YN +I  + K  + R+A +L  Q+    + PT  T+N L+ G C+N  L  A  LL 
Sbjct: 526 IILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLD 585

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTKSF 595
           +++ H +    V YTT++  +C EG++   +    +M  K        + + I+   K +
Sbjct: 586 TIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQW 645

Query: 596 ----FCMMLSN----GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                C +L +    G  PDQ     ++ AF +  D+   F+L   M+   L P     N
Sbjct: 646 KLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYN 705



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 18/317 (5%)

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V+++++   Y +   + +A+ +  ++ +     SI T+NSL+Y    +  + D   + + 
Sbjct: 180 VVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWD---VYNE 236

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           IK+ G   S  T +  ++  C +   Q  +   Q+ E K   P+ V++  ++   CK   
Sbjct: 237 IKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGF 296

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           +  A      M   G+ PD  +YN +I   C    + +A  L N M  H LEP   TYNI
Sbjct: 297 VDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNI 356

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L  G  + G +  A  ++  +     +   V YT +I  HC  G+V +A+  + +M+  G
Sbjct: 357 LAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHG 416

Query: 584 FEISI---------------RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
           F++SI                D     FC M +NG  PD      ++    + G++    
Sbjct: 417 FQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAI 476

Query: 629 ELAAVMIKSGLLPDKFL 645
            L   M  + ++P+  +
Sbjct: 477 LLYEKMCSNRIIPNSLI 493



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 23/163 (14%)

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TYN+++ +    +     + + N++ +     +  T +I++DGLC     ++A       
Sbjct: 216 TYNSLLYNL---RHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDT 272

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
           +      + V++ TI+  +C  G V                    D  KSFFCMML +G 
Sbjct: 273 EGKEFQPSVVSFNTIMSRYCKLGFV--------------------DVAKSFFCMMLKHGL 312

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            PD     +++      G +G   +L   M   GL PD    N
Sbjct: 313 LPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYN 355


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  931 bits (2405), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/656 (66%), Positives = 541/656 (82%), Gaps = 15/656 (2%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           MLA  YSR  MVHDA+FV+AKMK L+L+VSI TYNSLLYNLRHTDIMWD+Y++IK S  P
Sbjct: 173 MLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVP 232

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           +N YTN I+IDGLC+QSRLQDA+ FL+ET G+EFGPSVVS NA+MS +CK+G  +VAK  
Sbjct: 233 QNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSF 292

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FC+M+KYGL PD +SYNIL+HGLC+AGSMEEALEFTNDM  HGVEPD +TY+ILA GF +
Sbjct: 293 FCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRI 352

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L  ISGAWKV+Q++L+ G +PD+VTYT+LICG+CQ+GN+EE  KL+E MLSQG KL+++ 
Sbjct: 353 LGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVT 412

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+VLLSS+CKSGRIDEA+ LL+EME +GLKPDL+TYS+LI GLCK+  V +AI+LY EMC
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMC 472

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           SKRI PNSF   AI+ GL EK  I+EA+MYFDS+  S+  ++++LYNIMIDGY KLGNIG
Sbjct: 473 SKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIG 532

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EAV+ Y+Q+IEK ISP+IVTFNSLIYGFCK GK+A+A +LLDTIK+HGL P++VTYTT M
Sbjct: 533 EAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLM 592

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YCEEG++  +  +L EME KAI PT +TYTVV+KGLCK+ +L E+VQLL+ MY  G+ 
Sbjct: 593 NGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLF 652

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PDQITYNT+I+SFCK  DL+KAFQL NQM  H+L+P+  TYN+LI+GLCV G+LK+AD L
Sbjct: 653 PDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRL 712

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
           LV+LQ+ +I LTKVAYTTIIKAHCA+GDV  A+ FF QMVE+GFE+SIRDY+        
Sbjct: 713 LVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCK 772

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                  K FFCMML++G PPDQ+IC VML AFH+ GD  SVFE+ A+MIK GLLP
Sbjct: 773 RNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 233/480 (48%), Gaps = 25/480 (5%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W V  ++   G   +  T  +LI G C+   +++ +        + F  +V++++ L+S 
Sbjct: 220 WDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSG 279

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP- 306
            CK G +D A      M   GL PD+ +Y+IL+ GLC    + +A++  N+M +  + P 
Sbjct: 280 FCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPD 339

Query: 307 ----NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
               N  A+G  +LGL     I+ A      ++++    D+V Y I+I G+ ++GNI E+
Sbjct: 340 IVTYNILANGFRILGL-----ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEES 394

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +L  +++ + +  SIVT+  L+   CK+G++ +A  LL  +++ GL+P  +TY+  ++ 
Sbjct: 395 FKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHG 454

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+ G ++  + L +EM +K I P     + +I GL ++  + EA    + +    V  +
Sbjct: 455 LCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEE 514

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            I YN +I  + K  ++ +A +   Q+    + PT  T+N LI G C  G L  A  LL 
Sbjct: 515 IILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLD 574

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--------- 593
           +++ H +  T V YTT++  +C EGD+H       +M  K  + +   YT          
Sbjct: 575 TIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEG 634

Query: 594 ------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                      M + G  PDQ     ++ +F +  DL   F+L   M++  L P     N
Sbjct: 635 RLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYN 694



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 94/254 (37%), Gaps = 41/254 (16%)

Query: 407 HGLEPSAVTYTTFMNAYCEEGN---IQRLLALLQEMETKAIGPT---------------H 448
           +G   S V++    +    +G    ++R+L  + E E     P+               +
Sbjct: 109 YGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNN 168

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           V + ++     +   + +A+ +L  M V+ +     TYN+++ +    +     + + N+
Sbjct: 169 VVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNE 225

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           +    +     T  ILIDGLC    L++A   L          + V++  ++   C  G 
Sbjct: 226 IKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGS 285

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
           V                    D  KSFFCMM+  G  PD     ++L      G +    
Sbjct: 286 V--------------------DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEAL 325

Query: 629 ELAAVMIKSGLLPD 642
           E    M   G+ PD
Sbjct: 326 EFTNDMENHGVEPD 339


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  922 bits (2384), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/650 (68%), Positives = 532/650 (81%), Gaps = 16/650 (2%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           + MVHDA+FV+ KMKE +L+ SIQTYNSLLYNLRHTDIMWD+Y+DIK S TP++  T+SI
Sbjct: 96  SRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSI 155

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++DGLC QSR +DA+LFL++  GKEF PSVVS N IMSRYCKLG A+VAK  FC+MLKYG
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + PD +SYNILIHGL +AGSMEEALE TNDM + G++PD +TY I+AKGFHLL  +SGA 
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275

Query: 189 KVIQKLLI-KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           ++IQK+L  +G  PD+VTYTVLICG+CQ+GN+EE L+LR  +LS GF+LNVI YSVLLSS
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK G++DEAL LLYEMEA  L+PDLVTYSILI GLCKQ KV +AIQLY EMC  RI PN
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPN 395

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           SFAH  IL GLCEK M+++ARMYFDSLIMSN   DV LYNIMIDGYVKLG++ EAV+LY+
Sbjct: 396 SFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK 455

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           +L +K I+PSIVTFNSLIYGFCKN KV +ARRLL++IKLHGLEPSAVTYTT MNAYCEEG
Sbjct: 456 RLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEG 515

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           NI +L  LL EM  K I PT VTYTVVIKGLCKQ KL+E+VQLLEDM   G+ PDQITYN
Sbjct: 516 NINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYN 575

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           TII+ FCK KD+RKAF+LL+ M +HNLEPT ATYN+LIDGLC  GD+++AD +LVSLQ+ 
Sbjct: 576 TIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDR 635

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT--------------- 592
           NI+LTKVAYTT+IKAHC +GD  +A+  F QMVEKGFE+SI+DY+               
Sbjct: 636 NINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEA 695

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           K +FC+MLS+G  PDQEI E+ML AFH+ G + SVFEL AVMIK GLL D
Sbjct: 696 KYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/516 (23%), Positives = 214/516 (41%), Gaps = 118/516 (22%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY--------------------------- 276
           +L     S  + +AL +L +M+   L+P + TY                           
Sbjct: 89  MLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQ 148

Query: 277 -----SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
                SI++ GLC Q +   A+    +   K  +P+  +   I+   C+  +   A+ +F
Sbjct: 149 SARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFF 208

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY------------------------- 366
             ++    + D   YNI+I G +  G++ EA++L                          
Sbjct: 209 CMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLL 268

Query: 367 ------RQLIEKRIS-----PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
                 R++I+K ++     P +VT+  LI G C+ G + +A RL   +   G + + + 
Sbjct: 269 GLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVIL 328

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM- 474
           Y+  +++ C+ G +   L LL EME   + P  VTY+++I GLCKQ K+Q+A+QL ++M 
Sbjct: 329 YSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMC 388

Query: 475 ----------------------------------YVIGVTPDQITYNTIIRSFCKCKDLR 500
                                              +  + PD   YN +I  + K  D+ 
Sbjct: 389 FNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVE 448

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +A +L  ++    + P+  T+N LI G C N  +  A  LL S++ H +  + V YTT++
Sbjct: 449 EAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLM 508

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF--FCM-------------MLSNGFP 605
            A+C EG+++K      +M  K  E ++  YT      C              M + G  
Sbjct: 509 NAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLA 568

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           PDQ     ++  F +  D+   FEL   M+   L P
Sbjct: 569 PDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEP 604



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 140/293 (47%), Gaps = 3/293 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G V +AV +  ++++  +  SI T+NSL+Y     R       L + IK+     +
Sbjct: 441 YVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPS 500

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +++  C++  +      L E   K+  P+VV+   ++   CK    E +  L  
Sbjct: 501 AVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLE 560

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   GL PD  +YN +I   C A  M +A E  +DM  H +EP   TY++L  G     
Sbjct: 561 DMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYG 620

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A +V+  L  +  +   V YT +I  +C  G+ +  +K+   M+ +GF++++  YS
Sbjct: 621 DVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYS 680

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +++ +CK   I+EA      M + G+ PD   + +++    +   VH   +L
Sbjct: 681 AVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFEL 733


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  911 bits (2355), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/656 (66%), Positives = 535/656 (81%), Gaps = 23/656 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           MLA  YSR  MVHDA+FV+AKMK L+L+VSI TYNSLLYNLRHTDIMWD+Y++IK S  P
Sbjct: 173 MLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVP 232

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           +N YTN I+IDGLC+QSRLQDA+ FL+ET G+EFGPSVVS NA+MS +CK+G  +VAK  
Sbjct: 233 QNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSF 292

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FC+M+KYGL PD +SYNIL+HGLC+AGSMEEALEFTNDM  HGVEPD +TY+ILA GF +
Sbjct: 293 FCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRI 352

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L  ISGAWKV+Q++L+ G +PD+VTYT+LICG+CQ+GN+EE  KL+E MLSQG KL+++ 
Sbjct: 353 LGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVT 412

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+VLLSS+CKSGRIDEA+ LL+EME +GLKPDL+TYS   RG      V +AI+LY EMC
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS---RG-----AVEEAIELYEEMC 464

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           SKRI PNSF   AI+ GL EK  I+EA+MYFDS+  S+  ++++LYNIMIDGY KLGNIG
Sbjct: 465 SKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIG 524

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EAV+ Y+Q+IEK ISP+IVTFNSLIYGFCK GK+A+A +LLDTIK+HGL P++VTYTT M
Sbjct: 525 EAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLM 584

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YCEEG++  +  +L EME KAI PT +TYTVV+KGLCK+ +L E+VQLL+ MY  G+ 
Sbjct: 585 NGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLF 644

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PDQITYNT+I+SFCK  DL+KAFQL NQM  H+L+P+  TYN+LI+GLCV G+LK+AD L
Sbjct: 645 PDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRL 704

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
           LV+LQ+ +I LTKVAYTTIIKAHCA+GDV  A+ FF QMVE+GFE+SIRDY+        
Sbjct: 705 LVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCK 764

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                  K FFCMML++G PPDQ+IC VML AFH+ GD  SVFE+ A+MIK GLLP
Sbjct: 765 RNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 229/480 (47%), Gaps = 33/480 (6%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W V  ++   G   +  T  +LI G C+   +++ +        + F  +V++++ L+S 
Sbjct: 220 WDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSG 279

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP- 306
            CK G +D A      M   GL PD+ +Y+IL+ GLC    + +A++  N+M +  + P 
Sbjct: 280 FCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPD 339

Query: 307 ----NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
               N  A+G  +LGL     I+ A      ++++    D+V Y I+I G+ ++GNI E+
Sbjct: 340 IVTYNILANGFRILGL-----ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEES 394

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +L  +++ + +  SIVT+  L+   CK+G++ +A  LL  +++ GL+P  +TY+     
Sbjct: 395 FKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS----- 449

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
               G ++  + L +EM +K I P     + +I GL ++  + EA    + +    V  +
Sbjct: 450 ---RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEE 506

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            I YN +I  + K  ++ +A +   Q+    + PT  T+N LI G C  G L  A  LL 
Sbjct: 507 IILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLD 566

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--------- 593
           +++ H +  T V YTT++  +C EGD+H       +M  K  + +   YT          
Sbjct: 567 TIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEG 626

Query: 594 ------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                      M + G  PDQ     ++ +F +  DL   F+L   M++  L P     N
Sbjct: 627 RLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYN 686



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 124/262 (47%), Gaps = 7/262 (2%)

Query: 335 IMSNCIQDVVLYNIMID----GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           ++ N  +D  L N++ D     Y +   + +A+ +  ++    +  SI T+NSL+Y    
Sbjct: 156 LLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRH 215

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
              + D   + + IK  G+  +  T    ++  C +  +Q  +  L+E   +  GP+ V+
Sbjct: 216 TDIMWD---VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVS 272

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           +  ++ G CK   +  A      M   G+ PD  +YN ++   C    + +A +  N M 
Sbjct: 273 FNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDME 332

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
            H +EP   TYNIL +G  + G +  A  ++  +  + ++   V YT +I  HC  G++ 
Sbjct: 333 NHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIE 392

Query: 571 KAMTFFCQMVEKGFEISIRDYT 592
           ++     +M+ +G ++SI  YT
Sbjct: 393 ESFKLKEKMLSQGLKLSIVTYT 414



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 94/254 (37%), Gaps = 41/254 (16%)

Query: 407 HGLEPSAVTYTTFMNAYCEEGN---IQRLLALLQEMETKAIGPT---------------H 448
           +G   S V++    +    +G    ++R+L  + E E     P+               +
Sbjct: 109 YGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNN 168

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           V + ++     +   + +A+ +L  M V+ +     TYN+++ +    +     + + N+
Sbjct: 169 VVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNE 225

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           +    +     T  ILIDGLC    L++A   L          + V++  ++   C  G 
Sbjct: 226 IKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGS 285

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
           V                    D  KSFFCMM+  G  PD     ++L      G +    
Sbjct: 286 V--------------------DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEAL 325

Query: 629 ELAAVMIKSGLLPD 642
           E    M   G+ PD
Sbjct: 326 EFTNDMENHGVEPD 339


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/655 (58%), Positives = 499/655 (76%), Gaps = 16/655 (2%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           MLAF YSR  M+HDA+FVIAKMK+L+ + S+ TYNSLL+N+RHTDIMWD+Y++IKVS  P
Sbjct: 175 MLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAP 234

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           ++  T SI+I GLC+QS+L+DAI FL ++  K  GPS+VS+N IMS++CK+G  +VA+  
Sbjct: 235 QSECTTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVGLIDVARSF 293

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FCLM+K GL  D+FSYNIL+HGLC+AGSM+EAL FT+DM +HGVEPD +TY+ LAKGF L
Sbjct: 294 FCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLL 353

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L  +SGA KV+QK+L++G +PD+VTYT LICG+CQ+GN+EE LKLR+  LS+GFKLNVI 
Sbjct: 354 LGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIF 413

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y++LLS +CK GRI+EAL L  EME + L+PD + YSILI GLCK+  V +A QLY +M 
Sbjct: 414 YNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMR 473

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            KR  P+ FA  A+LLGL +   I+EAR YFD+    + ++DVVLYNIMIDGYV+L  I 
Sbjct: 474 LKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIA 533

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+QLY ++IE+ I+PS+VTFN+LI GFC+ G + +AR++L+ I+L GL PS VTYTT M
Sbjct: 534 EAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLM 593

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           NAYCE GN+Q +   L EME  A+ PTHVTYTV+IKGLC+Q K+ E++QLLE MY  G+ 
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLL 653

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +TYNTII+ FCK K++ KA QL N M LHN +PT  TY +LI+ LC+ GDLK+ D +
Sbjct: 654 PDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRM 713

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
           +VS+++ NI+L KV Y TIIKAHCA+G V KA+ +F QM+ KGF ISIRDY+        
Sbjct: 714 VVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCK 773

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                  K FF MMLS G  PD EIC+ +L AFHQ G+  SVFE  A+++KSG +
Sbjct: 774 RGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 140/594 (23%), Positives = 256/594 (43%), Gaps = 98/594 (16%)

Query: 58  ETPRNVYTNSIVIDGLC----QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           E  RN  +N +V D L     +   + DA+  + +     F  SV + N+++     +  
Sbjct: 161 EKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLH---NMRH 217

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            ++   ++  +   G      + +ILIHGLC    +E+A+ F +D               
Sbjct: 218 TDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHD--------------- 262

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
                        + KV+         P IV+   ++  +C++G ++       +M+  G
Sbjct: 263 -------------SNKVV--------GPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNG 301

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              +  +Y++LL  +C +G +DEALG   +ME  G++PD+VTY                 
Sbjct: 302 LLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTY----------------- 344

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
                        N+ A G +LLGL     ++ AR     +++     D+V Y  +I G+
Sbjct: 345 -------------NTLAKGFLLLGL-----MSGARKVVQKMLLQGLNPDLVTYTTLICGH 386

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            ++GNI EA++L ++ + +    +++ +N L+   CK G++ +A  L D ++   LEP  
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           + Y+  ++  C+EG +QR   L ++M  K   P H     V+ GL K   + EA    + 
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDT 506

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
              + +  D + YN +I  + +   + +A QL  +M    + P+  T+N LI+G C  GD
Sbjct: 507 WTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGD 566

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           L  A  +L  ++   +  + V YTT++ A+C  G++ +   F  +M              
Sbjct: 567 LMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEME------------- 613

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                  +N   P      V++    +   +    +L   M   GLLPD    N
Sbjct: 614 -------ANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYN 660



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 246/531 (46%), Gaps = 48/531 (9%)

Query: 115 EVAKGLFCLML-KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
           +VA   F  ++ +YG     FS  ++ H L   G  +E               D++  ++
Sbjct: 98  DVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKEL--------------DSVIKNL 143

Query: 174 LAKGFHLLSQISGAWKVIQKLLI---KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           +      + Q  G+  +I  LL+   +  D + + + +L   Y +   + + L +   M 
Sbjct: 144 I------VDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMK 197

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
              F+ +V  Y+ LL +M  +   D    +  E++  G      T SILI GLC+Q K+ 
Sbjct: 198 DLNFQASVPTYNSLLHNMRHT---DIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLE 254

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            AI   ++  +K + P+  +   I+   C+  +I  AR +F  ++ +  + D   YNI++
Sbjct: 255 DAISFLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILL 313

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            G    G++ EA+     + +  + P +VT+N+L  GF   G ++ AR+++  + L GL 
Sbjct: 314 HGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLN 373

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P  VTYTT +  +C+ GNI+  L L QE  ++      + Y +++  LCK  +++EA+ L
Sbjct: 374 PDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTL 433

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
            ++M  + + PD I Y+ +I   CK   +++A+QL  QM L    P       ++ GL  
Sbjct: 434 FDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFK 493

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
           NG++  A     +    ++    V Y  +I  +     + +AM  + +M+E+G   S+  
Sbjct: 494 NGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVT 553

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           +        L NGF      C        + GDL    ++  V+   GL+P
Sbjct: 554 FNT------LINGF------C--------RRGDLMEARKMLEVIRLKGLVP 584


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  793 bits (2049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/655 (58%), Positives = 498/655 (76%), Gaps = 16/655 (2%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           MLAF YSR  M+HDA+FVIAKMK+L+ + S+ TYNSLL+N+RHTDIMWD+Y++IKVS  P
Sbjct: 175 MLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAP 234

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           ++  T SI+I GLC+QS+L+DAI FL ++  K  GPS+VS+N IMS++CK+G  +VA+  
Sbjct: 235 QSECTTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVGLIDVARSX 293

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FCLM+K GL  D+FSYNIL+HGLC+AGSM+EAL FT+DM +HGVEPD +TY+ LAKGF L
Sbjct: 294 FCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLL 353

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L  +SGA KV+QK+L++G +PD+VTYT LICG+CQ+GN+EE LKLR+  LS+GFKLNVI 
Sbjct: 354 LGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIF 413

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y++LLS +CK GRI+EAL L  EME + L+PD + YSILI GLCK+  V +A QLY +M 
Sbjct: 414 YNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMR 473

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            KR  P+ FA  A+LLGL +   I+EAR YFD+    + ++DVVLYNIMIDGYV+L  I 
Sbjct: 474 LKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIA 533

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+QLY ++IE+ I+PS+VTFN+LI GFC+ G + +AR++L+ I+L GL PS VTYTT M
Sbjct: 534 EAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLM 593

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           NAYCE GN+Q +   L EME  A+ PTHVTYTV+IKGLC+Q K+ E++QLLE MY  G+ 
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLL 653

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +TYNTII+ FCK K++ KA QL N M LHN +PT  TY +LI+ LC+ GDLK+ D +
Sbjct: 654 PDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRM 713

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
           +VS+++ NI+L K  Y TIIKAHCA+G V KA+ +F QM+ KGF ISIRDY+        
Sbjct: 714 VVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCK 773

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                  K FF MMLS G  PD EIC+ +L AFHQ G+  SVFE  A+++KSG +
Sbjct: 774 RGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 140/594 (23%), Positives = 256/594 (43%), Gaps = 98/594 (16%)

Query: 58  ETPRNVYTNSIVIDGLC----QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           E  RN  +N +V D L     +   + DA+  + +     F  SV + N+++     +  
Sbjct: 161 EKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLH---NMRH 217

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            ++   ++  +   G      + +ILIHGLC    +E+A+ F +D               
Sbjct: 218 TDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHD--------------- 262

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
                        + KV+         P IV+   ++  +C++G ++       +M+  G
Sbjct: 263 -------------SNKVV--------GPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNG 301

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              +  +Y++LL  +C +G +DEALG   +ME  G++PD+VTY                 
Sbjct: 302 LLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTY----------------- 344

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
                        N+ A G +LLGL     ++ AR     +++     D+V Y  +I G+
Sbjct: 345 -------------NTLAKGFLLLGL-----MSGARKVVQKMLLQGLNPDLVTYTTLICGH 386

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            ++GNI EA++L ++ + +    +++ +N L+   CK G++ +A  L D ++   LEP  
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           + Y+  ++  C+EG +QR   L ++M  K   P H     V+ GL K   + EA    + 
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDT 506

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
              + +  D + YN +I  + +   + +A QL  +M    + P+  T+N LI+G C  GD
Sbjct: 507 WTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGD 566

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           L  A  +L  ++   +  + V YTT++ A+C  G++ +   F  +M              
Sbjct: 567 LMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEME------------- 613

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                  +N   P      V++    +   +    +L   M   GLLPD    N
Sbjct: 614 -------ANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYN 660



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 245/531 (46%), Gaps = 48/531 (9%)

Query: 115 EVAKGLFCLML-KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
           +VA   F  ++ +YG     FS  ++ H L   G  +E               D++  ++
Sbjct: 98  DVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKEL--------------DSVIKNL 143

Query: 174 LAKGFHLLSQISGAWKVIQKLLI---KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           +      + Q  G+  +I  LL+   +  D + + + +L   Y +   + + L +   M 
Sbjct: 144 I------VDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMK 197

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
              F+ +V  Y+ LL +M  +   D    +  E++  G      T SILI GLC+Q K+ 
Sbjct: 198 DLNFQASVPTYNSLLHNMRHT---DIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLE 254

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            AI   ++  +K + P+  +   I+   C+  +I  AR  F  ++ +  + D   YNI++
Sbjct: 255 DAISFLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILL 313

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            G    G++ EA+     + +  + P +VT+N+L  GF   G ++ AR+++  + L GL 
Sbjct: 314 HGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLN 373

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P  VTYTT +  +C+ GNI+  L L QE  ++      + Y +++  LCK  +++EA+ L
Sbjct: 374 PDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTL 433

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
            ++M  + + PD I Y+ +I   CK   +++A+QL  QM L    P       ++ GL  
Sbjct: 434 FDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFK 493

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
           NG++  A     +    ++    V Y  +I  +     + +AM  + +M+E+G   S+  
Sbjct: 494 NGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVT 553

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           +        L NGF      C        + GDL    ++  V+   GL+P
Sbjct: 554 FNT------LINGF------C--------RRGDLMEARKMLEVIRLKGLVP 584


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  716 bits (1847), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/671 (52%), Positives = 478/671 (71%), Gaps = 42/671 (6%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           ML F+ SR  MV ++++++ KMK+ +L VS Q+YNS+LYN R TD MWD+Y +IK     
Sbjct: 148 MLLFLSSRLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEIK----D 203

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           +N +T S V+DGLC+Q +L+DA+LFL+ +  K+ GPSVVS N+IMS YCKLGF ++AK  
Sbjct: 204 KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSF 263

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FC +LK GL P  +S+NILI+GLC+ GS+ EALE  +DM +HGVEPD++TY+IL KGFHL
Sbjct: 264 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHL 323

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL-NVI 239
           L  ISGA +VIQ +L KG  PD++TYT+L+CG CQ+GN++ GL L + MLS+GF+L ++I
Sbjct: 324 LGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSII 383

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            YSV+LS +CK+GR+DEAL L Y++EA GL PDLV YSI+I GLCK  K   A+++Y+EM
Sbjct: 384 PYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEM 443

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
           C KRI PNS   GAI+LGLC+K M+ EAR   DSLI S    D++LYNI+IDGY K G I
Sbjct: 444 CYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCI 503

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA++L++  IE  I+P++ TFNSLIYG+CK   +A+AR++LD IKL+GL PS V+YTT 
Sbjct: 504 EEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTL 563

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ---------- 469
           M+AY   G+I+ +  L +EM+ + I PT+VTY+V+ KGLC+ WKL+   Q          
Sbjct: 564 MDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKF 623

Query: 470 --LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
             +L DM   G+TPDQITYNTII+  C+ K L +AF+L  +M   NL+PTSATYNILID 
Sbjct: 624 NHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDS 683

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC+ G ++ AD  L SLQ+ N+SL+K AYTT+IKAHC +GD   A+  F Q++++GF +S
Sbjct: 684 LCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVS 743

Query: 588 IRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
           IRDY               +K FFC+MLS G  PD +ICEVM+ +           EL +
Sbjct: 744 IRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDLDICEVMIKS----------DELLS 793

Query: 633 VMIKSGLLPDK 643
             IK GLLPD+
Sbjct: 794 WTIKWGLLPDQ 804



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 213/473 (45%), Gaps = 57/473 (12%)

Query: 220 EEGLKLREVMLSQGFKL---NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK------ 270
           EEG KL E +LS  F+      + + +LL    +   +DE+L +L +M+   L       
Sbjct: 124 EEG-KLCE-LLSNSFRKWESTGLVWDMLLFLSSRLRMVDESLYILKKMKDRNLNVSTQSY 181

Query: 271 ----------------------PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
                                  +  TYS ++ GLC+Q K+  A+        K I P+ 
Sbjct: 182 NSVLYNFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV 241

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
            +  +I+   C+   +  A+ +F +++    +  V  +NI+I+G   +G+I EA++L   
Sbjct: 242 VSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASD 301

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + +  + P  VT+N L+ GF   G ++ A  ++  +   GL P  +TYT  +   C+ GN
Sbjct: 302 MNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGN 361

Query: 429 IQRLLALLQEM-----ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           I   L LL++M     E K+I P    Y+V++ GLCK  ++ EA+ L  D+   G+TPD 
Sbjct: 362 IDMGLILLKDMLSRGFELKSIIP----YSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDL 417

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           + Y+ +I   CK      A ++ ++M    + P S T   ++ GLC  G L  A  LL S
Sbjct: 418 VAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDS 477

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           L     +L  + Y  +I  +   G + +A+  F   +E G   ++  +    +    +  
Sbjct: 478 LISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQN 537

Query: 604 FPPDQEICEV---------------MLIAFHQGGDLGSVFELAAVMIKSGLLP 641
               ++I +V               ++ A+   G + S+ EL   M   G+ P
Sbjct: 538 IAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPP 590



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 27/184 (14%)

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           + E++ +L+ M    +     +YN+++ +F +   +   ++ +     H       TY+ 
Sbjct: 159 VDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEIKDKNEH-------TYST 211

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           ++DGLC    L++A   L + +  +I  + V++ +I+ ++C  G V              
Sbjct: 212 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFV-------------- 257

Query: 584 FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                 D  KSFFC +L  G  P      +++      G +    ELA+ M K G+ PD 
Sbjct: 258 ------DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDS 311

Query: 644 FLIN 647
              N
Sbjct: 312 VTYN 315


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/670 (53%), Positives = 472/670 (70%), Gaps = 42/670 (6%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           ML F+ SR  MV D+++++ KMK+ +L VS Q+YNS+LY+ R TD MWD+Y +IK     
Sbjct: 171 MLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK----D 226

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           +N +T S V+DGLC+Q +L+DA+LFL+ +  K+ GPSVVS N+IMS YCKLGF ++AK  
Sbjct: 227 KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 286

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FC +LK GL P  +S+NILI+GLC+ GS+ EALE  +DM +HGVEPD++TY+ILAKGFHL
Sbjct: 287 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 346

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN-VI 239
           L  ISGAW+VI+ +L KG  PD++TYT+L+CG CQ+GN++ GL L + MLS+GF+LN +I
Sbjct: 347 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 406

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
             SV+LS +CK+GRIDEAL L  +M+A GL PDLV YSI+I GLCK  K   A+ LY+EM
Sbjct: 407 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 466

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
           C KRI PNS  HGA+LLGLC+K M+ EAR   DSLI S    D+VLYNI+IDGY K G I
Sbjct: 467 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 526

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA++L++ +IE  I+PS+ TFNSLIYG+CK   +A+AR++LD IKL+GL PS V+YTT 
Sbjct: 527 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 586

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK-------LQEAV---- 468
           M+AY   GN + +  L +EM+ + I PT+VTY+V+ KGLC+ WK       L+E +    
Sbjct: 587 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 646

Query: 469 -QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            Q L DM   G+ PDQITYNTII+  C+ K L  AF  L  M   NL+ +SATYNILID 
Sbjct: 647 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 706

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LCV G ++ AD  + SLQE N+SL+K AYTT+IKAHC +GD   A+  F Q++ +GF +S
Sbjct: 707 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 766

Query: 588 IRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
           IRDY               +K FFC+MLS G  PD +ICEVM+ +           EL +
Sbjct: 767 IRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIKS----------DELLS 816

Query: 633 VMIKSGLLPD 642
             IK GLLPD
Sbjct: 817 WTIKWGLLPD 826



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 34/191 (17%)

Query: 464 LQEAVQLLED-MYVIGVTPDQ------ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           L   +++++D +Y++    DQ       +YN+++  F +   +   ++ +        + 
Sbjct: 175 LSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK-------DK 227

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              TY+ ++DGLC    L++A   L + +  +I  + V++ +I+  +C  G V       
Sbjct: 228 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV------- 280

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
                        D  KSFFC +L  G  P      +++      G +    ELA+ M K
Sbjct: 281 -------------DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 327

Query: 637 SGLLPDKFLIN 647
            G+ PD    N
Sbjct: 328 HGVEPDSVTYN 338


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/670 (53%), Positives = 472/670 (70%), Gaps = 42/670 (6%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           ML F+ SR  MV D+++++ KMK+ +L VS Q+YNS+LY+ R TD MWD+Y +IK     
Sbjct: 142 MLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK----D 197

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           +N +T S V+DGLC+Q +L+DA+LFL+ +  K+ GPSVVS N+IMS YCKLGF ++AK  
Sbjct: 198 KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 257

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FC +LK GL P  +S+NILI+GLC+ GS+ EALE  +DM +HGVEPD++TY+ILAKGFHL
Sbjct: 258 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 317

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN-VI 239
           L  ISGAW+VI+ +L KG  PD++TYT+L+CG CQ+GN++ GL L + MLS+GF+LN +I
Sbjct: 318 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 377

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
             SV+LS +CK+GRIDEAL L  +M+A GL PDLV YSI+I GLCK  K   A+ LY+EM
Sbjct: 378 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 437

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
           C KRI PNS  HGA+LLGLC+K M+ EAR   DSLI S    D+VLYNI+IDGY K G I
Sbjct: 438 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 497

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA++L++ +IE  I+PS+ TFNSLIYG+CK   +A+AR++LD IKL+GL PS V+YTT 
Sbjct: 498 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 557

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK-------LQEAV---- 468
           M+AY   GN + +  L +EM+ + I PT+VTY+V+ KGLC+ WK       L+E +    
Sbjct: 558 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 617

Query: 469 -QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            Q L DM   G+ PDQITYNTII+  C+ K L  AF  L  M   NL+ +SATYNILID 
Sbjct: 618 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 677

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LCV G ++ AD  + SLQE N+SL+K AYTT+IKAHC +GD   A+  F Q++ +GF +S
Sbjct: 678 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 737

Query: 588 IRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
           IRDY               +K FFC+MLS G  PD +ICEVM+ +           EL +
Sbjct: 738 IRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIKS----------DELLS 787

Query: 633 VMIKSGLLPD 642
             IK GLLPD
Sbjct: 788 WTIKWGLLPD 797



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 34/191 (17%)

Query: 464 LQEAVQLLED-MYVIGVTPDQ------ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           L   +++++D +Y++    DQ       +YN+++  F +   +   ++ +        + 
Sbjct: 146 LSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK-------DK 198

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              TY+ ++DGLC    L++A   L + +  +I  + V++ +I+  +C  G V       
Sbjct: 199 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV------- 251

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
                        D  KSFFC +L  G  P      +++      G +    ELA+ M K
Sbjct: 252 -------------DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 298

Query: 637 SGLLPDKFLIN 647
            G+ PD    N
Sbjct: 299 HGVEPDSVTYN 309


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/605 (55%), Positives = 443/605 (73%), Gaps = 17/605 (2%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           ML F+ SR  MV D+++++ KMK+ +L VS Q+YNS+LY+ R TD MWD+Y +IK     
Sbjct: 129 MLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK----D 184

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           +N +T S V+DGLC+Q +L+DA+LFL+ +  K+ GPSVVS N+IMS YCKLGF ++AK  
Sbjct: 185 KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 244

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FC +LK GL P  +S+NILI+GLC+ GS+ EALE  +DM +HGVEPD++TY+ILAKGFHL
Sbjct: 245 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN-VI 239
           L  ISGAW+VI+ +L KG  PD++TYT+L+CG CQ+GN++ GL L + MLS+GF+LN +I
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
             SV+LS +CK+GRIDEAL L  +M+A GL PDLV YSI+I GLCK  K   A+ LY+EM
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
           C KRI PNS  HGA+LLGLC+K M+ EAR   DSLI S    D+VLYNI+IDGY K G I
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA++L++ +IE  I+PS+ TFNSLIYG+CK   +A+AR++LD IKL+GL PS V+YTT 
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK-------LQEAV---- 468
           M+AY   GN + +  L +EM+ + I PT+VTY+V+ KGLC+ WK       L+E +    
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604

Query: 469 -QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            Q L DM   G+ PDQITYNTII+  C+ K L  AF  L  M   NL+ +SATYNILID 
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LCV G ++ AD  + SLQE N+SL+K AYTT+IKAHC +GD   A+  F Q++ +GF +S
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 724

Query: 588 IRDYT 592
           IRDY+
Sbjct: 725 IRDYS 729



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 181/383 (47%), Gaps = 16/383 (4%)

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TYS ++ GLC+Q K+  A+        K I P+  +  +I+ G C+   +  A+ +F ++
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           +    +  V  +NI+I+G   +G+I EA++L   + +  + P  VT+N L  GF   G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV-TYTV 453
           + A  ++  +   GL P  +TYT  +   C+ GNI   L LL++M ++      +   +V
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           ++ GLCK  ++ EA+ L   M   G++PD + Y+ +I   CK      A  L ++M    
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           + P S T+  L+ GLC  G L  A  LL SL     +L  V Y  +I  +   G + +A+
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV---------------MLIAF 618
             F  ++E G   S+  +    +    +      ++I +V               ++ A+
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548

Query: 619 HQGGDLGSVFELAAVMIKSGLLP 641
              G+  S+ EL   M   G+ P
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPP 571



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 163/353 (46%), Gaps = 12/353 (3%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L++ +K      ++   SIVI GLC+  +   A+    E   K   P+  +  A++   C
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC 444

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           + G    A+ L   ++  G   D   YNI+I G   +G +EEALE    +   G+ P   
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           T++ L  G+     I+ A K++  + + G  P +V+YT L+  Y   GN +   +LR  M
Sbjct: 505 TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE------------MEAVGLKPDLVTYS 277
            ++G     + YSV+   +C+  + +    +L E            ME+ G+ PD +TY+
Sbjct: 565 KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYN 624

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            +I+ LC+   +  A      M S+ +  +S  +  ++  LC    I +A  +  SL   
Sbjct: 625 TIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQ 684

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           N       Y  +I  +   G+   AV+L+ QL+ +  + SI  ++++I   C+
Sbjct: 685 NVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 129/288 (44%), Gaps = 26/288 (9%)

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           +L  + +++ + +++ ++ ++ S  ++NS++Y F +  K+ D  + +     H       
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH------- 188

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TY+T ++  C +  ++  +  L+  E K IGP+ V++  ++ G CK   +  A      +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+ P   ++N +I   C    + +A +L + M  H +EP S TYNIL  G  + G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
             A  ++  + +  +S   + YT ++   C  G++   +     M+ +GFE+        
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL-------- 360

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                  N   P    C VML    + G +     L   M   GL PD
Sbjct: 361 -------NSIIP----CSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/344 (20%), Positives = 137/344 (39%), Gaps = 44/344 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y+++G + +A+ +   + E  +  S+ T+NSL+Y                          
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIY-------------------------- 511

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
                 G C+   + +A   L         PSVVS   +M  Y   G  +    L   M 
Sbjct: 512 ------GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565

Query: 126 KYGLHPDAFSYNILIHGLCIAGS------------MEEALEFTNDMGRHGVEPDAITYSI 173
             G+ P   +Y+++  GLC                 E+  +   DM   G+ PD ITY+ 
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           + +    +  +SGA+  ++ +  +  D    TY +LI   C  G + +       +  Q 
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
             L+  AY+ L+ + C  G  + A+ L +++   G    +  YS +I  LC++  ++   
Sbjct: 686 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMNCFP 745

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
              N +C    +  SF +  IL   C +  ++  ++  +  ++S
Sbjct: 746 GQSNGVCCLISNERSFVYCPILSANCRRHTLSVEKLSHEVTVIS 789



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 90/201 (44%), Gaps = 29/201 (14%)

Query: 464 LQEAVQLLED-MYVIGVTPDQ------ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           L   +++++D +Y++    DQ       +YN+++  F +   +   ++ +        + 
Sbjct: 133 LSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK-------DK 185

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              TY+ ++DGLC    L++A   L + +  +I  + V++ +I+  +C  G V  A +FF
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245

Query: 577 CQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEVMLIAFHQG 621
           C +++ G   S+  +    +  C+             M  +G  PD     ++   FH  
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305

Query: 622 GDLGSVFELAAVMIKSGLLPD 642
           G +   +E+   M+  GL PD
Sbjct: 306 GMISGAWEVIRDMLDKGLSPD 326


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/605 (55%), Positives = 443/605 (73%), Gaps = 17/605 (2%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           ML F+ SR  MV D+++++ KMK+ +L VS Q+YNS+LY+ R TD MWD+Y +IK     
Sbjct: 129 MLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK----D 184

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           +N +T S V+DGLC+Q +L+DA+LFL+ +  K+ GPSVVS N+IMS YCKLGF ++AK  
Sbjct: 185 KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 244

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FC +LK GL P  +S+NILI+GLC+ GS+ EALE  +DM +HGVEPD++TY+ILAKGFHL
Sbjct: 245 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN-VI 239
           L  ISGAW+VI+ +L KG  PD++TYT+L+CG CQ+GN++ GL L + MLS+GF+LN +I
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
             SV+LS +CK+GRIDEAL L  +M+A GL PDLV YSI+I GLCK  K   A+ LY+EM
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
           C KRI PNS  HGA+LLGLC+K M+ EAR   DSLI S    D+VLYNI+IDGY K G I
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA++L++ +IE  I+PS+ TFNSLIYG+CK   +A+AR++LD IKL+GL PS V+YTT 
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK-------LQEAV---- 468
           M+AY   GN + +  L +EM+ + I PT+VTY+V+ KGLC+ WK       L+E +    
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604

Query: 469 -QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            Q L DM   G+ PDQITYNTII+  C+ K L  AF  L  M   NL+ +SATYNILID 
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LCV G ++ AD  + SLQE N+SL+K AYTT+IKAHC +GD   A+  F Q++ +GF +S
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 724

Query: 588 IRDYT 592
           IRDY+
Sbjct: 725 IRDYS 729



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 181/383 (47%), Gaps = 16/383 (4%)

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TYS ++ GLC+Q K+  A+        K I P+  +  +I+ G C+   +  A+ +F ++
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           +    +  V  +NI+I+G   +G+I EA++L   + +  + P  VT+N L  GF   G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV-TYTV 453
           + A  ++  +   GL P  +TYT  +   C+ GNI   L LL++M ++      +   +V
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           ++ GLCK  ++ EA+ L   M   G++PD + Y+ +I   CK      A  L ++M    
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           + P S T+  L+ GLC  G L  A  LL SL     +L  V Y  +I  +   G + +A+
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV---------------MLIAF 618
             F  ++E G   S+  +    +    +      ++I +V               ++ A+
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548

Query: 619 HQGGDLGSVFELAAVMIKSGLLP 641
              G+  S+ EL   M   G+ P
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPP 571



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 163/353 (46%), Gaps = 12/353 (3%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L++ +K      ++   SIVI GLC+  +   A+    E   K   P+  +  A++   C
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC 444

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           + G    A+ L   ++  G   D   YNI+I G   +G +EEALE    +   G+ P   
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           T++ L  G+     I+ A K++  + + G  P +V+YT L+  Y   GN +   +LR  M
Sbjct: 505 TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE------------MEAVGLKPDLVTYS 277
            ++G     + YSV+   +C+  + +    +L E            ME+ G+ PD +TY+
Sbjct: 565 KAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYN 624

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            +I+ LC+   +  A      M S+ +  +S  +  ++  LC    I +A  +  SL   
Sbjct: 625 TIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQ 684

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           N       Y  +I  +   G+   AV+L+ QL+ +  + SI  ++++I   C+
Sbjct: 685 NVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 129/288 (44%), Gaps = 26/288 (9%)

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           +L  + +++ + +++ ++ ++ S  ++NS++Y F +  K+ D  + +     H       
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH------- 188

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TY+T ++  C +  ++  +  L+  E K IGP+ V++  ++ G CK   +  A      +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+ P   ++N +I   C    + +A +L + M  H +EP S TYNIL  G  + G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
             A  ++  + +  +S   + YT ++   C  G++   +     M+ +GFE+        
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL-------- 360

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                  N   P    C VML    + G +     L   M   GL PD
Sbjct: 361 -------NSIIP----CSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/342 (21%), Positives = 136/342 (39%), Gaps = 44/342 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y+++G + +A+ +   + E  +  S+ T+NSL+Y                          
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIY-------------------------- 511

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
                 G C+   + +A   L         PSVVS   +M  Y   G  +    L   M 
Sbjct: 512 ------GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565

Query: 126 KYGLHPDAFSYNILIHGLCIAGS------------MEEALEFTNDMGRHGVEPDAITYSI 173
             G+ P   +Y+++  GLC                 E+  +   DM   G+ PD ITY+ 
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           + +    +  +SGA+  ++ +  +  D    TY +LI   C  G + +       +  Q 
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
             L+  AY+ L+ + C  G  + A+ L +++   G    +  YS +I  LC++  ++   
Sbjct: 686 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMNCFP 745

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
              N +C    +  SF +  IL   C +  ++  ++  + L+
Sbjct: 746 GQSNGVCCLISNERSFVYCPILSANCRRHTLSVEKLSHEVLL 787



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 90/201 (44%), Gaps = 29/201 (14%)

Query: 464 LQEAVQLLED-MYVIGVTPDQ------ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           L   +++++D +Y++    DQ       +YN+++  F +   +   ++ +        + 
Sbjct: 133 LSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK-------DK 185

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              TY+ ++DGLC    L++A   L + +  +I  + V++ +I+  +C  G V  A +FF
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245

Query: 577 CQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEVMLIAFHQG 621
           C +++ G   S+  +    +  C+             M  +G  PD     ++   FH  
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305

Query: 622 GDLGSVFELAAVMIKSGLLPD 642
           G +   +E+   M+  GL PD
Sbjct: 306 GMISGAWEVIRDMLDKGLSPD 326


>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Brachypodium distachyon]
          Length = 795

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 269/655 (41%), Positives = 431/655 (65%), Gaps = 17/655 (2%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
           LA  Y+R  M+HDA++V++KM  L++++S+ TY+SLLY LR TD+  +L+++++     +
Sbjct: 141 LANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLLYGLRMTDMALELFEEMEAYGISK 200

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQET-AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           + Y++SI+IDGLC+Q ++ +A+ FLQE   G+ F P  +S N +MS  C  GF + AK  
Sbjct: 201 SEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSALCNWGFIQPAKSF 260

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
            CLMLKYGL+PD ++Y+ LIHGLC  G ++EA++    +   G++ + +TY+ L  G+ L
Sbjct: 261 LCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRL 320

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L       K+IQ +  +G +PDIVTYT+LI G+C+ G+VEEG+K+R  +L QG +LN++ 
Sbjct: 321 LGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVT 380

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YSVLL+++ K G + EA  LL E+ ++GL  D++ YSILI G CK  ++ +A+++ + MC
Sbjct: 381 YSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMC 440

Query: 301 -SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            S+++ P S  H +IL+GLC+K ++ EAR Y +++ +     DVVLYN++IDGY K+G+I
Sbjct: 441 CSQKVVPTSLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDI 500

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             AV LY Q++   + P+IVT NS++YG+CK G +  A      I++  L P+ VTYTT 
Sbjct: 501 SNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTL 560

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           M+A  E G +  +L++L EM  K I P  +TY+VVIKGLCK+ +  +A+  L++M+  GV
Sbjct: 561 MDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGV 620

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             D +TYNT+I+ FC+ +D++ AF + ++M    + PT  TYN LI+ LC+ G +  A+ 
Sbjct: 621 NADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEY 680

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS----- 594
           LL SL+E  I L K AYTT+IKA CA+G  ++A++ F ++++ GFE +++D++ +     
Sbjct: 681 LLESLRERGIELRKFAYTTLIKAECAKGMPYEAISLFGKLLDDGFETTVKDFSAAINRLC 740

Query: 595 ----------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                     F   MLS G  PD ++  V++ A  +  +L  +  L A+ +K+G+
Sbjct: 741 KRKFAKEAVMFIPFMLSAGVFPDTQVYYVLVRALQKRKELFYLPLLHALAVKTGI 795



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 68/251 (27%)

Query: 410 EPSAVTYTTFMNAYCEEGNIQ----------------------------RL----LALLQ 437
           +PS++ +    N+Y     I                             R+    L L +
Sbjct: 132 DPSSIMWDALANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLLYGLRMTDMALELFE 191

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED------------------------ 473
           EME   I  +  +++++I GLCKQ K+ EA+  L++                        
Sbjct: 192 EMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSALCNW 251

Query: 474 ------------MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
                       M   G+ PD+ TY+T+I   CK   L +A  L  ++    ++  + TY
Sbjct: 252 GFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTY 311

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N LI+G  + G  +    ++  ++   I    V YT +I  HC  GDV + M     +++
Sbjct: 312 NSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILD 371

Query: 582 KGFEISIRDYT 592
           +G +++I  Y+
Sbjct: 372 QGLQLNIVTYS 382


>gi|10140738|gb|AAG13570.1|AC037425_1 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 811

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 283/656 (43%), Positives = 424/656 (64%), Gaps = 19/656 (2%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
           LA  Y+R  MVHDA++V++KM  L++++S+ TY+SLL+ LR TD+  +L+++++      
Sbjct: 157 LANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGLRMTDVALELFEEMESCGVSP 216

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKE--FGPSVVSLNAIMSRYCKLGFAEVAKG 119
           + Y++SI+I+GLC+Q ++ +A+ FLQE A KE  F P  ++ N +MS  C  GF + AK 
Sbjct: 217 SEYSHSIIINGLCKQDKVGEALSFLQE-ARKEGKFKPLGMTFNILMSALCNWGFVQSAKS 275

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
             CLMLKYGL PD ++++ LIHGLC  GSMEEAL+    + + G+E + +TY+ L  G+ 
Sbjct: 276 FLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYR 335

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           LL       K+IQ +  +G +PD+VTYT+LI G+C+ G+VEEG+K+R+ +L QG +LN++
Sbjct: 336 LLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIV 395

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            YSVLL+++ K G   E   LL E+  +GL  D++ YSILI G CK  ++ KA+Q+ N M
Sbjct: 396 TYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAM 455

Query: 300 CS-KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           CS +R+ P S  H +ILLGLC+K ++ EAR Y +++       DVV YN++IDGY KLG+
Sbjct: 456 CSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGD 515

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I  AV+LY Q+    + P+IVT NSL+YG+CK G +  A      I+L GL P+AVTYTT
Sbjct: 516 IVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTT 575

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            M+A  E G +  +L+L  EM  K I    VTY+V++KGLCKQ +  EA+ +L+DM   G
Sbjct: 576 LMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKG 635

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           +  D ITYNT+I+ FC+ ++++ AF + + M    L PT  TYN+LI+ LC+ G +  A+
Sbjct: 636 INADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAE 695

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS---- 594
            LL SL+E+ I L K AYTT+IKA CA+G    A+    ++++ GFE SI D++ +    
Sbjct: 696 ILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRL 755

Query: 595 -----------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                      F  +MLS G  PD +I  V+  A  +  +L  +  L A+ +K+G+
Sbjct: 756 CKRQFAKEAFMFVPIMLSVGIYPDTQIYCVLGRALQKNSELVYLPILNALAVKTGI 811


>gi|110289270|gb|ABG66143.1| expressed protein [Oryza sativa Japonica Group]
 gi|125575153|gb|EAZ16437.1| hypothetical protein OsJ_31906 [Oryza sativa Japonica Group]
          Length = 829

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 283/656 (43%), Positives = 424/656 (64%), Gaps = 19/656 (2%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
           LA  Y+R  MVHDA++V++KM  L++++S+ TY+SLL+ LR TD+  +L+++++      
Sbjct: 175 LANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGLRMTDVALELFEEMESCGVSP 234

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKE--FGPSVVSLNAIMSRYCKLGFAEVAKG 119
           + Y++SI+I+GLC+Q ++ +A+ FLQE A KE  F P  ++ N +MS  C  GF + AK 
Sbjct: 235 SEYSHSIIINGLCKQDKVGEALSFLQE-ARKEGKFKPLGMTFNILMSALCNWGFVQSAKS 293

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
             CLMLKYGL PD ++++ LIHGLC  GSMEEAL+    + + G+E + +TY+ L  G+ 
Sbjct: 294 FLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYR 353

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           LL       K+IQ +  +G +PD+VTYT+LI G+C+ G+VEEG+K+R+ +L QG +LN++
Sbjct: 354 LLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIV 413

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            YSVLL+++ K G   E   LL E+  +GL  D++ YSILI G CK  ++ KA+Q+ N M
Sbjct: 414 TYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAM 473

Query: 300 CS-KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           CS +R+ P S  H +ILLGLC+K ++ EAR Y +++       DVV YN++IDGY KLG+
Sbjct: 474 CSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGD 533

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I  AV+LY Q+    + P+IVT NSL+YG+CK G +  A      I+L GL P+AVTYTT
Sbjct: 534 IVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTT 593

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            M+A  E G +  +L+L  EM  K I    VTY+V++KGLCKQ +  EA+ +L+DM   G
Sbjct: 594 LMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKG 653

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           +  D ITYNT+I+ FC+ ++++ AF + + M    L PT  TYN+LI+ LC+ G +  A+
Sbjct: 654 INADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAE 713

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS---- 594
            LL SL+E+ I L K AYTT+IKA CA+G    A+    ++++ GFE SI D++ +    
Sbjct: 714 ILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRL 773

Query: 595 -----------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                      F  +MLS G  PD +I  V+  A  +  +L  +  L A+ +K+G+
Sbjct: 774 CKRQFAKEAFMFVPIMLSVGIYPDTQIYCVLGRALQKNSELVYLPILNALAVKTGI 829


>gi|242039357|ref|XP_002467073.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
 gi|241920927|gb|EER94071.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
          Length = 808

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 274/655 (41%), Positives = 415/655 (63%), Gaps = 17/655 (2%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
           LA  Y+R  M HDA++V++KM  L++++SI TY+SLLY+LR  D+  +++ +++    P 
Sbjct: 154 LANSYARAQMNHDALYVLSKMSSLNMQISITTYDSLLYSLRKADVALEIFKEMESCGIPP 213

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGK-EFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           + Y++SI+IDGLC+Q ++ +A+ FLQE   + +F P  ++ N +MS  C  GF + AK +
Sbjct: 214 SDYSHSILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNTLMSALCNWGFIQDAKSV 273

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FCLMLKYGL+P   +Y+ +IHGLC  GS+ EA      +   G+E D +T + L  GF L
Sbjct: 274 FCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNSLINGFRL 333

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
                   K+I+ +   G +PDIVTYT+LI G+C+ G+VEEG+K+R+ +L QG +LN++ 
Sbjct: 334 HGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQGMELNIVT 393

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YSVL++++ K G   E   LL E+ +VGL+ D++ YSILI G  K  ++ +A+Q++N MC
Sbjct: 394 YSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQVWNLMC 453

Query: 301 S-KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
           S +R++P S  H +ILLGLC+K  + EAR Y +++       DVVLYN++IDGY K+G+I
Sbjct: 454 SSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDGYAKVGDI 513

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           G AVQLY  +I   + P+IVT NSL+YG+CK G +  A      I+L  L P+ VTYTT 
Sbjct: 514 GNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLLPTTVTYTTL 573

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           M+A  E G +  +L+L +EM  K I P  VTY+VVIKGLCKQ+   +A  +L+DM + G 
Sbjct: 574 MDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNVLDDMCIEGF 633

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             D I YNT+I+ FC+ +D + AF +   M    + PT  TYN+L++ LC  G + +A+ 
Sbjct: 634 DADPIPYNTLIQGFCETQDAKNAFGVYELMVFRGVMPTPVTYNLLVNVLCSKGLVIHAEM 693

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF--FC 597
            L S ++    L K AY T+IKA CA+G  +KA+ +F ++++ GFE SI D++ +    C
Sbjct: 694 QLESFRKQGAKLRKFAYITLIKAQCAKGMPYKAIMWFGKLLDAGFEASIEDFSAAINRLC 753

Query: 598 -------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                        +MLS G  PD E+  V+  A  +  +L  +  L A+ IK+G+
Sbjct: 754 KRQFTKEALMLVPIMLSVGVYPDVELYRVLGTAVQKKNELFYLPILQALAIKTGI 808



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 102/437 (23%), Positives = 193/437 (44%), Gaps = 66/437 (15%)

Query: 229 MLSQGFK---LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
           +L  GFK    N I +  L +S  ++    +AL +L +M ++ ++  + TY  L+  L K
Sbjct: 136 ILWSGFKEWDSNSIVWDALANSYARAQMNHDALYVLSKMSSLNMQISITTYDSLLYSLRK 195

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
            D    A++++ EM S  I P+ ++H                                  
Sbjct: 196 ADV---ALEIFKEMESCGIPPSDYSH---------------------------------- 218

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLI-EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            +I+IDG  K   IGEA+   +++  E +  P  +TFN+L+   C  G + DA+ +   +
Sbjct: 219 -SILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNTLMSALCNWGFIQDAKSVFCLM 277

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
             +GL PS  TY+T ++  C+ G++     + Q +  + +    VT   +I G       
Sbjct: 278 LKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNSLINGFRLHGHT 337

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           +E  +++E M  +GV PD +TY  +I   C+  D+ +  ++   +    +E    TY++L
Sbjct: 338 REIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQGMELNIVTYSVL 397

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV---- 580
           I+ L   G     + LL  +    + L  +AY+ +I  +   G++ +A+  +  M     
Sbjct: 398 INALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQVWNLMCSSQR 457

Query: 581 ----------------EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
                           +KGF     D  +S+   + S   P D  +  V++  + + GD+
Sbjct: 458 VTPTSVNHVSILLGLCKKGF----LDEARSYLETIASKYQPSDVVLYNVVIDGYAKVGDI 513

Query: 625 GSVFELAAVMIKSGLLP 641
           G+  +L   +I +G+ P
Sbjct: 514 GNAVQLYDAIIMAGMCP 530


>gi|297610666|ref|NP_001064867.2| Os10g0479200 [Oryza sativa Japonica Group]
 gi|255679497|dbj|BAF26781.2| Os10g0479200 [Oryza sativa Japonica Group]
          Length = 818

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 276/627 (44%), Positives = 409/627 (65%), Gaps = 19/627 (3%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
           LA  Y+R  MVHDA++V++KM  L++++S+ TY+SLL+ LR TD+  +L+++++      
Sbjct: 157 LANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGLRMTDVALELFEEMESCGVSP 216

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKE--FGPSVVSLNAIMSRYCKLGFAEVAKG 119
           + Y++SI+I+GLC+Q ++ +A+ FLQE A KE  F P  ++ N +MS  C  GF + AK 
Sbjct: 217 SEYSHSIIINGLCKQDKVGEALSFLQE-ARKEGKFKPLGMTFNILMSALCNWGFVQSAKS 275

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
             CLMLKYGL PD ++++ LIHGLC  GSMEEAL+    + + G+E + +TY+ L  G+ 
Sbjct: 276 FLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYR 335

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           LL       K+IQ +  +G +PD+VTYT+LI G+C+ G+VEEG+K+R+ +L QG +LN++
Sbjct: 336 LLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIV 395

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            YSVLL+++ K G   E   LL E+  +GL  D++ YSILI G CK  ++ KA+Q+ N M
Sbjct: 396 TYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAM 455

Query: 300 CS-KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           CS +R+ P S  H +ILLGLC+K ++ EAR Y +++       DVV YN++IDGY KLG+
Sbjct: 456 CSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGD 515

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I  AV+LY Q+    + P+IVT NSL+YG+CK G +  A      I+L GL P+AVTYTT
Sbjct: 516 IVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTT 575

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            M+A  E G +  +L+L  EM  K I    VTY+V++KGLCKQ +  EA+ +L+DM   G
Sbjct: 576 LMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKG 635

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           +  D ITYNT+I+ FC+ ++++ AF + + M    L PT  TYN+LI+ LC+ G +  A+
Sbjct: 636 INADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAE 695

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS---- 594
            LL SL+E+ I L K AYTT+IKA CA+G    A+    ++++ GFE SI D++ +    
Sbjct: 696 ILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRL 755

Query: 595 -----------FFCMMLSNGFPPDQEI 610
                      F  +MLS G  PD +I
Sbjct: 756 CKRQFAKEAFMFVPIMLSVGIYPDTQI 782



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 125/529 (23%), Positives = 239/529 (45%), Gaps = 78/529 (14%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSE---TPRNVY 64
           + G + +A+ +  ++ +  +++ I TYNSL+   R   +  ++   I++        ++ 
Sbjct: 301 KVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLV 360

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEVAKGLFCL 123
           T +I+I G C+   +++ +   ++   +    ++V+ + +++   K G F E+   L   
Sbjct: 361 TYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEI-DNLLGE 419

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM------------------------ 159
           +   GL  D  +Y+ILIHG C  G +E+AL+  N M                        
Sbjct: 420 IYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKG 479

Query: 160 ------------GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
                        R     D + Y+++  G+  L  I  A ++  ++ + G  P IVT  
Sbjct: 480 LLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCN 539

Query: 208 VLICGYCQIGNVEEGLK-LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            L+ GYC+IG+++      R + LS G     + Y+ L+ ++ ++G ++  L L  EM A
Sbjct: 540 SLLYGYCKIGDLQLAESYFRAIQLS-GLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVA 598

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
             +K + VTYS++++GLCKQ +  +AI +  +M SK I+ +   +  ++ G CE E +  
Sbjct: 599 KRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQ- 657

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
                    M+  I D++L   ++                         P+ VT+N LI 
Sbjct: 658 ---------MAFHIHDIMLCRGLV-------------------------PTPVTYNLLIN 683

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             C  GKV  A  LL++++ +G++     YTT + A C +G     + L+ ++       
Sbjct: 684 VLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEA 743

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           +   ++  I  LCK+   +EA   +  M  +G+ PD   Y  + R+  K
Sbjct: 744 SIEDFSAAINRLCKRQFAKEAFMFVPIMLSVGIYPDTQIYCVLGRALQK 792



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/170 (20%), Positives = 76/170 (44%), Gaps = 19/170 (11%)

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           ++ +  S+ + + +  A  +L++M   N++ +  TY+ L+ GL +      A  L   ++
Sbjct: 154 WDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGLRMT---DVALELFEEME 210

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG--------FEISIR-------- 589
              +S ++ +++ II   C +  V +A++F  +  ++G        F I +         
Sbjct: 211 SCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGFV 270

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
              KSF C+ML  G  PD+     ++    + G +    +L   + K G+
Sbjct: 271 QSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGM 320


>gi|414871052|tpg|DAA49609.1| TPA: hypothetical protein ZEAMMB73_878928 [Zea mays]
          Length = 807

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 266/655 (40%), Positives = 412/655 (62%), Gaps = 17/655 (2%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
           LA  Y+R  M HDA++V++KM  L++++SI TY+SLLY+LR  D+   ++ +++    P 
Sbjct: 153 LANSYARAQMNHDALYVLSKMNSLNMQISITTYDSLLYSLRKADVALAIFKEMESCGIPP 212

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGK-EFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           + Y++ I+IDGLC+Q ++ +A+ FLQET  + +F P  ++ N +MS  C  GF + AK +
Sbjct: 213 SDYSHGILIDGLCKQGKIGEALSFLQETRKEGKFKPLGMTFNTLMSALCNWGFIQDAKSV 272

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FCLMLKYGL+P   +Y+ +IHGLC  GS+ EA +    +   G+E D +T + L  GF L
Sbjct: 273 FCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNSLINGFRL 332

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
                   K+I+ +   G +PD+VTYT+LI G+C+ G+VEEG+++R+ +L QG +LN++ 
Sbjct: 333 HGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQGIELNIVT 392

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YSVL++++ K G   E   L  E+ ++GL+ D++ YSILI G CK  ++ +A+Q++N MC
Sbjct: 393 YSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRALQVWNLMC 452

Query: 301 -SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            S+R+ P S  H +ILLGLC+K  + EAR Y +++       DVVLYN++IDGY K+G+I
Sbjct: 453 CSQRVIPTSVNHVSILLGLCKKGFLDEARSYLETVASKYQPSDVVLYNVVIDGYAKVGDI 512

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           G AVQLY  +I   + P+IVT NSL+YG+CK G +  A      I+L  L P+ VTYTT 
Sbjct: 513 GNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFMAIQLSDLLPTTVTYTTL 572

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           M+A  E G +  +L++ +EM  K I P  +TY+VVIKGLCKQ    +A  +L+DMY  G 
Sbjct: 573 MDALSEAGKVHSMLSIFKEMTGKGIRPNAITYSVVIKGLCKQLMFHDAKNVLDDMYREGF 632

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             D I YNT+I+ FC+ +D + AF +   M    + P+  TYN+L++ LC+ G + +A+ 
Sbjct: 633 DADPIPYNTLIQGFCETQDAKNAFYVYELMVCRGVMPSPVTYNLLVNVLCLKGLVIHAEM 692

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS----- 594
            L S ++    L K AYTT+IKA CA+G  +KA+ +  ++++ GFE SI D++ +     
Sbjct: 693 KLESFRKQGAELRKFAYTTLIKAQCAKGMPYKAIMWVGKLLDAGFEASIEDFSAAINRLC 752

Query: 595 ----------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                        +MLS G  PD ++  V+  A  +  +   +  L A+ IK+G+
Sbjct: 753 KRQFTREALMLISIMLSVGVYPDIQLYRVLGTAVQKKNESFYLPILQALAIKTGI 807



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/466 (22%), Positives = 198/466 (42%), Gaps = 81/466 (17%)

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           +GSD       +L CG+            RE      +  + I +  L +S  ++    +
Sbjct: 124 QGSDSAPTLCDILWCGF------------RE------WDSSSIVWDALANSYARAQMNHD 165

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           AL +L +M ++ ++  + TY  L+  L K D    A+ ++ EM S  I P+ ++HG    
Sbjct: 166 ALYVLSKMNSLNMQISITTYDSLLYSLRKADV---ALAIFKEMESCGIPPSDYSHG---- 218

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI-EKRIS 375
                                          I+IDG  K G IGEA+   ++   E +  
Sbjct: 219 -------------------------------ILIDGLCKQGKIGEALSFLQETRKEGKFK 247

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P  +TFN+L+   C  G + DA+ +   +  +GL PS  TY+T ++  C+ G++     +
Sbjct: 248 PLGMTFNTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDI 307

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
            Q +  + +    VT   +I G       +E  +++E M  +GV PD +TY  +I   C+
Sbjct: 308 FQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCE 367

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
             D+ +  ++   +    +E    TY++LI+ L   G     + L   +    + L  +A
Sbjct: 368 GGDVEEGMRIRKDILGQGIELNIVTYSVLINALFKKGLFYEVENLFGEICSIGLELDVIA 427

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMV--------------------EKGFEISIRDYTKSF 595
           Y+ +I   C  G++ +A+  +  M                     +KGF     D  +S+
Sbjct: 428 YSILIHGFCKLGEIGRALQVWNLMCCSQRVIPTSVNHVSILLGLCKKGF----LDEARSY 483

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
              + S   P D  +  V++  + + GD+G+  +L   +I +G+ P
Sbjct: 484 LETVASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCP 529


>gi|218184750|gb|EEC67177.1| hypothetical protein OsI_34045 [Oryza sativa Indica Group]
          Length = 755

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 246/615 (40%), Positives = 368/615 (59%), Gaps = 35/615 (5%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQ-SRLQ---DAILFLQETAGKEFGPSVVS 100
           DI+W+ +         R   +N  V D L    +R Q   DA+  L + +      SV +
Sbjct: 156 DILWNRF---------RECDSNGCVWDALANSYARAQMVHDALYVLSKMSSLNMQISVFT 206

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
            ++++     L    VA  LF  M   G+ P  +S++I+I+GLC   SMEEAL+    + 
Sbjct: 207 YDSLLH---GLRMTNVALELFEEMESCGVSPSEYSHSIIINGLC---SMEEALDLFERVT 260

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
           + G+E + +TY+ L  G+ LL       K+IQ +  +G +PD+VTYT+LI G+C+ G+VE
Sbjct: 261 KEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVE 320

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
           EG+K+R+ +L QG +LN++ YSVLL+++ K G   E   LL E+  +GL  D++ YSILI
Sbjct: 321 EGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILI 380

Query: 281 RGLCKQDKVHKAIQLYNEMCS-KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
            G CK  ++ KA+Q+ N MCS +R+ P S  H +ILLGLC+K ++ EAR Y +++     
Sbjct: 381 HGYCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQ 440

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             DVV YN++IDGY KLG+I  AV+LY Q+    + P+IVT NSL+YG+CK G +  A  
Sbjct: 441 PTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAES 500

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
               I+L GL P+AVTYTT M+A  E G +  +L+L  EM  K I    VTY+VV+KGLC
Sbjct: 501 YFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVVVKGLC 560

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           KQ +  EA+ +L+DM   G+  D ITYNT+I+ FC+ ++++ AF + + M    L PT  
Sbjct: 561 KQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPV 620

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYN+LI+ LC+ G +  A+ LL SL+E+ I L K AYTT+IKA CA+G    A+    ++
Sbjct: 621 TYNLLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKL 680

Query: 580 VEKGFEISIRDYTKS---------------FFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
           ++ GFE SI D++ +               F  +MLS G  PD +I  V+  A  +  +L
Sbjct: 681 LDAGFEASIEDFSAAINRLCKRQFAKEAFMFVPIMLSVGIYPDTQIYCVLGRALQKNSEL 740

Query: 625 GSVFELAAVMIKSGL 639
             +  L A+ +K+G+
Sbjct: 741 VYLPILNALAVKTGI 755



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 279/531 (52%), Gaps = 8/531 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
           LA  Y+R  MVHDA++V++KM  L++++S+ TY+SLL+ LR T++  +L+++++      
Sbjct: 175 LANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGLRMTNVALELFEEMESCGVSP 234

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + Y++SI+I+GLC    +++A+   +    +     +V+ N++++ Y  LG  +    + 
Sbjct: 235 SEYSHSIIINGLCS---MEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKII 291

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M   G+ PD  +Y ILI G C +G +EE ++   D+   G++ + +TYS+L       
Sbjct: 292 QMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSVLLNALFKK 351

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS--QGFKLNVI 239
                   ++ ++   G D D++ Y++LI GYC++G +E+ L++   M S  +    ++ 
Sbjct: 352 GMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLN 411

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP-DLVTYSILIRGLCKQDKVHKAIQLYNE 298
            +S+LL    K   ++    L  E  A   +P D+V Y+++I G  K   +  A++LY++
Sbjct: 412 HFSILLGLCKKGLLVEARWYL--ENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQ 469

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           +    + P      ++L G C+   +  A  YF ++ +S  +   V Y  ++D   + G 
Sbjct: 470 ITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGE 529

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +   + L+ +++ KRI  + VT++ ++ G CK  +  +A  +L  +   G+    +TY T
Sbjct: 530 VNTMLSLFDEMVAKRIKANAVTYSVVVKGLCKQLRFDEAINVLKDMDSKGINADPITYNT 589

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +  +CE  N+Q    +   M  + + PT VTY ++I  LC + K+ +A  LLE +   G
Sbjct: 590 LIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLRENG 649

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +   +  Y T+I++ C       A  L+ ++     E +   ++  I+ LC
Sbjct: 650 IKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLC 700


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 192/658 (29%), Positives = 348/658 (52%), Gaps = 21/658 (3%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR--- 61
            + + G V DA  V+ +M E     ++ TYN ++  L    ++ D   ++K S   +   
Sbjct: 224 AHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLL-DEAIELKRSMVDKGLV 282

Query: 62  -NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            ++YT  I+I+G C + R ++A L L E       P  ++ NA++  + + G  E A  +
Sbjct: 283 PDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRI 342

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M+  G+  +   +N L++G+C AG ME+ALE   +M   GVEPD+ TYS+L +G   
Sbjct: 343 KDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCR 402

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              ++ A++++ ++  +   P ++TY+V+I G C+ GN++    +   M+  G K N + 
Sbjct: 403 GQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVV 462

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+++  K GR++E+  +L  M   G+ PD+  Y+ LI G CK  ++ +A     EM 
Sbjct: 463 YTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEML 522

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            +R+ PN+  +GA + G  +   +  A  YF+ ++    + +V +Y  +I+G+ K GN+ 
Sbjct: 523 ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 582

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  ++R ++ +R+   + T++ LI+G  +NGK+ +A  +   ++  GL P+A TY + +
Sbjct: 583 EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLI 642

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C++GN+ +   LL+EM  K I P  VTY ++I GLCK  +++ A  L +D+   G+T
Sbjct: 643 SGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLT 702

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ +TY  ++  +CK K+   AFQLL +M L  + P +  YN++++  C     + A  L
Sbjct: 703 PNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDL 762

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
              + E   + T V++ T+I+ +C  G + +A     +M+EK F  +   YT        
Sbjct: 763 FQEMLEKGFAST-VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCK 821

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                  K  +  M      P  +    +L  +H  G++  V  L   M+  G+ PDK
Sbjct: 822 AGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDK 879



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 184/638 (28%), Positives = 304/638 (47%), Gaps = 24/638 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVY 64
           + G +  A+ ++ +M E  ++   QTY+ L+        M   ++L D++K  +    V 
Sbjct: 367 KAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL 426

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S++I+GLC+   LQ     L+E       P+ V    +M+ + K G  E ++ +   M
Sbjct: 427 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 486

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G+ PD F YN LI G C A  MEEA  +  +M    + P+A TY     G+    ++
Sbjct: 487 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 546

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +   ++L  G  P++  YT LI G+C+ GNV E   +   +LS+    +V  YSVL
Sbjct: 547 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL 606

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  + ++G++ EA G+  E++  GL P+  TY+ LI G CKQ  V KA QL  EMC K I
Sbjct: 607 IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 666

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +P+   +  ++ GLC+   I  A+  FD +       + V Y  M+DGY K  N   A Q
Sbjct: 667 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 726

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L  +++ + + P    +N ++   CK  K   A  L   +   G   S V++ T +  YC
Sbjct: 727 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYC 785

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G +Q    LL+EM  K   P HVTYT +I   CK   + EA +L  +M    V P   
Sbjct: 786 KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAK 845

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TY +++  +    ++ +   L  +M    +EP   TY ++ID  C  G++  A  L   +
Sbjct: 846 TYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 905

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
               + ++  AY  +I+A C + +  + +    ++ E GF +                G 
Sbjct: 906 LVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRL----------------GL 949

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           P     C V+   F   G++    E+   M+K G + +
Sbjct: 950 P----TCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN 983



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 170/618 (27%), Positives = 313/618 (50%), Gaps = 23/618 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           ML   Y + G + +AV V    K  + + S+ + NSLL +L      ++ W ++D +   
Sbjct: 150 MLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAH 209

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           +   +VYT + +I   C+   ++DA   L E   K   P++V+ N I+   C+    + A
Sbjct: 210 KVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEA 269

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M+  GL PD ++Y+ILI+G C+     EA     +M   G++P+ ITY+ L  G
Sbjct: 270 IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDG 329

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F     I  A+++  +++  G + +++ +  L+ G C+ G +E+ L++ + M+ +G + +
Sbjct: 330 FMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPD 389

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              YS+L+   C+   +  A  LL EM+   L P ++TYS++I GLC+   +     +  
Sbjct: 390 SQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILR 449

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM    + PN+  +  ++    ++  + E+RM  + +     + DV  YN +I G+ K  
Sbjct: 450 EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAK 509

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EA     +++E+R+ P+  T+ + I G+ K G++  A R  + +   G+ P+   YT
Sbjct: 510 RMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYT 569

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +  +C+EGN+    ++ + + ++ +     TY+V+I GL +  K+ EA  +  ++   
Sbjct: 570 ALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK 629

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ P+  TYN++I   CK  ++ KA QLL +M +  + P   TYNILIDGLC  G+++ A
Sbjct: 630 GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERA 689

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             L   ++   ++   V Y  ++  +C   +   A     Q++E+               
Sbjct: 690 KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAF----QLLEE--------------- 730

Query: 598 MMLSNGFPPDQEICEVML 615
            ML  G PPD  I  V+L
Sbjct: 731 -MLLRGVPPDAFIYNVIL 747



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 153/602 (25%), Positives = 279/602 (46%), Gaps = 50/602 (8%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+ V  + +M  Y K+GF   A  +F     +   P   S N L+  L     +E   + 
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + M  H V PD  TY+ +      +  +  A +V+ ++  KG  P++VTY V+I G C+
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              ++E ++L+  M+ +G   ++  Y +L++  C   R  EA  +L EM  VGLKP+ +T
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G  +Q  + +A ++ +EM +  I  N      +L G+C+   + +A      ++
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D   Y+++I+G+ +  N+  A +L  ++ +++++P+++T++ +I G C+ G + 
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 442

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
               +L  + ++GL+P+AV YTT M A+ +EG ++    +L+ M  + I P    Y  +I
Sbjct: 443 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLI 502

Query: 456 KGLCKQWKLQEA----VQLLE-------------------------------DMYVIGVT 480
            G CK  +++EA    +++LE                               +M   GV 
Sbjct: 503 IGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVL 562

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+   Y  +I   CK  ++ +AF +   +    +     TY++LI GL  NG +  A  +
Sbjct: 563 PNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGI 622

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
              LQE  +      Y ++I   C +G+V KA     +M  KG    I  Y         
Sbjct: 623 FSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCK 682

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                  K+ F  +   G  P+      M+  + +  +  + F+L   M+  G+ PD F+
Sbjct: 683 AGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFI 742

Query: 646 IN 647
            N
Sbjct: 743 YN 744



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 149/548 (27%), Positives = 272/548 (49%), Gaps = 14/548 (2%)

Query: 2    LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVS 57
            L   +++ G V ++  ++ +M+E  +   +  YNSL+       R  +    L + ++  
Sbjct: 466  LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 525

Query: 58   ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
              P N +T    IDG  +   ++ A  +  E       P+V    A++  +CK G    A
Sbjct: 526  LRP-NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEA 584

Query: 118  KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              +F  +L   +  D  +Y++LIHGL   G M EA    +++   G+ P+A TY+ L  G
Sbjct: 585  FSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISG 644

Query: 178  FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                  +  A ++++++ IKG +PDIVTY +LI G C+ G +E    L + +  +G   N
Sbjct: 645  SCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPN 704

Query: 238  VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
             + Y+ ++   CKS     A  LL EM   G+ PD   Y++++   CK++K  KA+ L+ 
Sbjct: 705  CVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQ 764

Query: 298  EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            EM  K  + ++ +   ++ G C+   + EA    + +I    I + V Y  +ID   K G
Sbjct: 765  EMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAG 823

Query: 358  NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
             +GEA +L+ ++ E+ + P+  T+ SL++G+   G +++   L + +   G+EP  +TY 
Sbjct: 824  MMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYY 883

Query: 418  TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
              ++AYC EGN+     L  E+  K +  +   Y  +I+ LCK+ +  E ++LL ++   
Sbjct: 884  VMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGES 943

Query: 478  GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM----WLHNLEPTSATYNILIDGLCVNGD 533
            G      T + I R F    ++ +A ++L  M    W+ N    + +   L+DG     +
Sbjct: 944  GFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN----TTSLGDLVDGNQNGAN 999

Query: 534  LKNADCLL 541
             +++D LL
Sbjct: 1000 SEDSDNLL 1007



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 135/319 (42%), Gaps = 50/319 (15%)

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
           N   + V++++++D Y K+G + EAV ++         PS+++ NSL+    K  KV   
Sbjct: 140 NGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELF 199

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
            ++ D +  H + P   TYT                                    +I  
Sbjct: 200 WKVFDGMCAHKVLPDVYTYTN-----------------------------------MISA 224

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
            CK   +++A ++L +M   G +P+ +TYN II   C+ + L +A +L   M    L P 
Sbjct: 225 HCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPD 284

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             TY+ILI+G C+    + A  +L+ + +  +    + Y  +I     +GD+ +A     
Sbjct: 285 LYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKD 344

Query: 578 QMVEKGFEISIRDYT-------------KSFFCM--MLSNGFPPDQEICEVMLIAFHQGG 622
           +MV  G E ++  +              K+   M  M+  G  PD +   +++    +G 
Sbjct: 345 EMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQ 404

Query: 623 DLGSVFELAAVMIKSGLLP 641
           ++   FEL   M K  L P
Sbjct: 405 NMARAFELLDEMKKRKLAP 423



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/227 (20%), Positives = 96/227 (42%), Gaps = 3/227 (1%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
            Y ++G + +A  ++ +M E     +  TY SL+ +     +M +   L+ +++       
Sbjct: 784  YCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPT 843

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
              T + ++ G      + +     +E   K   P  ++   ++  YC+ G    A  L  
Sbjct: 844  AKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKD 903

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             +L  G+     +Y+ LI  LC      E L+  N++G  G      T S++A+GF +  
Sbjct: 904  EILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAG 963

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
             +  A +V++ ++  G   +  +   L+ G     N E+   L + M
Sbjct: 964  NMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 189/591 (31%), Positives = 299/591 (50%), Gaps = 18/591 (3%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++ GLC   +  DA+L  +E + K   P  V+ N +++   K    + A  L   M+  G
Sbjct: 16  ILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P+ FSYN ++HG C A  +E AL     M   G  PD ++Y+ +  G   L Q+  A 
Sbjct: 75  FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +V+ K++ +G  P+++TY  L+ G+C++G+++  ++L   M  +G++ N I Y+ ++  +
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGL 194

Query: 249 CKSGRIDEALGLLYEMEAVG-LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           C   ++D AL L  EME  G   PD+ TYS ++  L K  KV  A +L   M SK  SPN
Sbjct: 195 CSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPN 254

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              + ++L GLC+   + EA      +  S C  ++V YN +IDG+ KLG I EA  L  
Sbjct: 255 VVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLE 314

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++++    P++VT+  L+  FCK GK  DA  L++ +   G  P+  TY + ++ +C++ 
Sbjct: 315 EMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD 374

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            ++R   LL  M  K   P  V+Y  VI GLCK  K+ E V LLE M      PD +T+N
Sbjct: 375 EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 434

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL-QE 546
           TII + CK   +  A++L N +      P   TYN L+ GLC +     A+ LL  + ++
Sbjct: 435 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 494

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTKSFFC-- 597
              S   + Y T+I   C    V +A   F QM+  G       + I I    K  F   
Sbjct: 495 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDE 554

Query: 598 ------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                 +ML NGF P       ++  F + G+L    E+  +++  G  PD
Sbjct: 555 ANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPD 605



 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 178/627 (28%), Positives = 314/627 (50%), Gaps = 42/627 (6%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRN 62
           S++  + DA+ ++ +M +     ++ +YN++L+      R  + +W L + + +   P +
Sbjct: 55  SKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALW-LLEQMVMRGCPPD 113

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V + + VI+GLC+  ++ +A   + +   +   P+V++   ++  +C++G  + A  L  
Sbjct: 114 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 173

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR--------------------- 161
            M + G  P+A +YN ++HGLC    ++ AL+   +M                       
Sbjct: 174 KMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKS 233

Query: 162 ---------------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
                           G  P+ +TYS L  G     ++  A  ++Q++   G  P+IVTY
Sbjct: 234 GKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTY 293

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             +I G+C++G ++E   L E M+  G + NV+ Y+VLL + CK G+ ++A+GL+  M  
Sbjct: 294 NTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVE 353

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G  P+L TY+ L+   CK+D+V +A QL + M  K   PN  ++  ++ GLC+   + E
Sbjct: 354 KGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHE 413

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
             +  + ++ +NC+ D+V +N +ID   K   +  A +L+  + E   +P++VT+NSL++
Sbjct: 414 GVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVH 473

Query: 387 GFCKNGKVADARRLL-DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
           G CK+ +   A  LL +  +  G  P  +TY T ++  C+   + R   L  +M +  + 
Sbjct: 474 GLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLA 533

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  VTY++VI  LCK   + EA  +LE M   G  P  ITY T+I  FCK  +L KA ++
Sbjct: 534 PDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEI 593

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           L  +      P   T++I ID L   G L+ A  LL ++    +    V Y T++K  C 
Sbjct: 594 LQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCD 653

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYT 592
                 A+  F  M + G E     YT
Sbjct: 654 ASRTEDAVDLFEVMRQCGCEPDNATYT 680



 Score =  298 bits (764), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 180/605 (29%), Positives = 302/605 (49%), Gaps = 17/605 (2%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P +  T + +I+GL +  RL DAI  L+E     F P+V S N ++  +CK    E A  
Sbjct: 41  PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALW 100

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M+  G  PD  SY  +I+GLC    ++EA    + M + G +P+ ITY  L  GF 
Sbjct: 101 LLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFC 160

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQGFKLNV 238
            +  + GA ++++K+  +G  P+ +TY  ++ G C    ++  L+L +E+  S     +V
Sbjct: 161 RVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDV 220

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             YS ++ S+ KSG++D+A  L+  M + G  P++VTYS L+ GLCK  K+ +A  L   
Sbjct: 221 FTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQR 280

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M     SPN   +  I+ G C+   I EA    + ++   C  +VV Y +++D + K G 
Sbjct: 281 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 340

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             +A+ L   ++EK   P++ T+NSL+  FCK  +V  A +LL ++   G  P+ V+Y T
Sbjct: 341 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 400

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +   C+   +   + LL++M +    P  VT+  +I  +CK +++  A +L   +   G
Sbjct: 401 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 460

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL-HNLEPTSATYNILIDGLCVNGDLKNA 537
            TP+ +TYN+++   CK +   +A  LL +M       P   TYN +IDGLC +  +  A
Sbjct: 461 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 520

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SF 595
             L + +    ++   V Y+ +I + C    + +A      M++ GF+     Y      
Sbjct: 521 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 580

Query: 596 FC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           FC             ++LS G  PD     + +    + G L    EL   M+++GL+PD
Sbjct: 581 FCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPD 640

Query: 643 KFLIN 647
               N
Sbjct: 641 TVTYN 645



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 283/525 (53%), Gaps = 5/525 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSET-PR 61
           + R G +  AV ++ KM E   + +  TYN++++ L   R  D    L+ +++ S + P 
Sbjct: 159 FCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPP 218

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+T S ++D L +  ++ DA   ++    K   P+VV+ ++++   CK G  + A  L 
Sbjct: 219 DVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 278

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G  P+  +YN +I G C  G ++EA     +M   G +P+ +TY++L   F   
Sbjct: 279 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 338

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A  +++ ++ KG  P++ TY  L+  +C+   VE   +L   M+ +G   NV++Y
Sbjct: 339 GKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSY 398

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +++ +CK+ ++ E + LL +M +    PD+VT++ +I  +CK  +V  A +L+N +  
Sbjct: 399 NTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE 458

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN-CIQDVVLYNIMIDGYVKLGNIG 360
              +PN   + +++ GLC+     +A      +     C  D++ YN +IDG  K   + 
Sbjct: 459 SGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVD 518

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A +L+ Q++   ++P  VT++ +I   CK   + +A  +L+ +  +G +P A+TY T +
Sbjct: 519 RAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLI 578

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + +C+ GN+ + L +LQ + +K   P  VT+++ I  L K+ +L++A +LLE M   G+ 
Sbjct: 579 DGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLV 638

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           PD +TYNT+++ FC       A  L   M     EP +ATY  L+
Sbjct: 639 PDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 187/372 (50%), Gaps = 4/372 (1%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M  +G K +   +  +L  +C +G+  +A+    EM      PD VTY+ +I GL K D+
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           +  AI+L  EM     +PN F++  +L G C+   +  A    + ++M  C  DVV Y  
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I+G  KL  + EA ++  ++I++   P+++T+ +L+ GFC+ G +  A  L+  +   G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV-TYTVVIKGLCKQWKLQEA 467
             P+A+TY   M+  C    +   L L +EME     P  V TY+ ++  L K  K+ +A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            +L+E M   G +P+ +TY++++   CK   L +A  LL +M      P   TYN +IDG
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
            C  G +  A  LL  + +       V YT ++ A C  G    A+     MVEKG+  +
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 359

Query: 588 IRDYTK--SFFC 597
           +  Y      FC
Sbjct: 360 LFTYNSLLDMFC 371



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 226/466 (48%), Gaps = 39/466 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVY 64
           ++G V DA  ++  M       ++ TY+SLL+ L      D    L   +  S    N+ 
Sbjct: 232 KSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIV 291

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +IDG C+  R+ +A   L+E       P+VV+   ++  +CK G AE A GL  +M
Sbjct: 292 TYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM 351

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G  P+ F+YN L+   C    +E A +  + M + G  P+ ++Y+ +  G    +++
Sbjct: 352 VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 411

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
                +++++L     PDIVT+  +I   C+   V+   +L  ++   G   N++ Y+ L
Sbjct: 412 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 471

Query: 245 LSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +  +CKS R D+A  LL EM    G  PD++TY+ +I GLCK  +V +A +L+ +M S  
Sbjct: 472 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 531

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++P+   +  ++  LC+   + EA    + ++ +      + Y  +IDG+ K GN+ +A+
Sbjct: 532 LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKAL 591

Query: 364 QLYRQLIEKRISPSIVTF-----------------------------------NSLIYGF 388
           ++ + L+ K   P +VTF                                   N+L+ GF
Sbjct: 592 EILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGF 651

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
           C   +  DA  L + ++  G EP   TYTT +    ++ + + LLA
Sbjct: 652 CDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLA 697



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 176/351 (50%), Gaps = 6/351 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETP 60
            + + G   DA+ ++  M E     ++ TYNSLL      D +      L   I+    P
Sbjct: 334 AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP 393

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            NV + + VI GLC+ +++ + +L L++       P +V+ N I+   CK    ++A  L
Sbjct: 394 -NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL 452

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR-HGVEPDAITYSILAKGFH 179
           F L+ + G  P+  +YN L+HGLC +   ++A     +M R  G  PD ITY+ +  G  
Sbjct: 453 FNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLC 512

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A+K+  ++L  G  PD VTY+++I   C+   ++E   + E+ML  GF    I
Sbjct: 513 KSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAI 572

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y  L+   CK+G +D+AL +L  + + G  PD+VT+SI I  L K+ ++ +A +L   M
Sbjct: 573 TYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 632

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
               + P++  +  +L G C+     +A   F+ +    C  D   Y  ++
Sbjct: 633 LRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  323 bits (829), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 178/597 (29%), Positives = 321/597 (53%), Gaps = 16/597 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++YT  I+I+G C + R ++A L L E       P  ++ NA++  + + G  E A  + 
Sbjct: 275 DLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIK 334

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G+  +   +N L++G+C AG ME+ALE   +M   GVEPD+ TYS+L +G    
Sbjct: 335 DEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRG 394

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             ++ A++++ ++  +   P ++TY+V+I G C+ GN++    +   M+  G K N + Y
Sbjct: 395 QNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVY 454

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+++  K GR++E+  +L  M   G+ PD+  Y+ LI G CK  ++ +A     EM  
Sbjct: 455 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE 514

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +R+ PN+  +GA + G  +   +  A  YF+ ++    + +V +Y  +I+G+ K GN+ E
Sbjct: 515 RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 574

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  ++R ++ +R+   + T++ LI+G  +NGK+ +A  +   ++  GL P+A TY + ++
Sbjct: 575 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 634

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C++GN+ +   LL+EM  K I P  VTY ++I GLCK  +++ A  L +D+   G+TP
Sbjct: 635 GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 694

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           + +TY  ++  +CK K+   AFQLL +M L  + P +  YN++++  C     + A  L 
Sbjct: 695 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLF 754

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT--------- 592
             + E   + T V++ T+I+ +C  G + +A     +M+EK F  +   YT         
Sbjct: 755 QEMLEKGFAST-VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKA 813

Query: 593 ------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                 K  +  M      P  +    +L  +H  G++  V  L   M+  G+ PDK
Sbjct: 814 GMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDK 870



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 176/644 (27%), Positives = 312/644 (48%), Gaps = 26/644 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSE 58
           + R G +  A  +  +M    ++ ++  +N+LL  +       +  +IM ++ +  K  E
Sbjct: 321 FMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME--KGVE 378

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
                Y  S++I+G C+   +  A   L E   ++  P+V++ + I++  C+ G  +   
Sbjct: 379 PDSQTY--SLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 436

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +   M+  GL P+A  Y  L+      G +EE+      M   G+ PD   Y+ L  GF
Sbjct: 437 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 496

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               ++  A   + ++L +   P+  TY   I GY + G +E   +    MLS G   NV
Sbjct: 497 CKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNV 556

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+ L+   CK G + EA  +   + +  +  D+ TYS+LI GL +  K+H+A  +++E
Sbjct: 557 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 616

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           +  K + PN+F + +++ G C++  + +A    + + +     D+V YNI+IDG  K G 
Sbjct: 617 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 676

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I  A  L+  +  + ++P+ VT+ +++ G+CK+     A +LL+ + L G+ P A  Y  
Sbjct: 677 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 736

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +N  C+E   ++ L L QEM  K    T V++  +I+G CK  KLQEA  LLE+M    
Sbjct: 737 ILNFCCKEEKFEKALDLFQEMLEKGFAST-VSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 795

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
             P+ +TY ++I   CK   + +A +L  +M   N+ PT+ TY  L+ G    G++    
Sbjct: 796 FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVS 855

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            L   +    I   K+ Y  +I A+C EG+V +A     +++ KG              M
Sbjct: 856 ALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKG--------------M 901

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            + +GF      C V+   F   G++    E+   M+K G + +
Sbjct: 902 PMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN 945



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 169/616 (27%), Positives = 288/616 (46%), Gaps = 86/616 (13%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVY 64
           + G +  A+ ++ +M E  ++   QTY+ L+        M   ++L D++K  +    V 
Sbjct: 358 KAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL 417

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S++I+GLC+   LQ     L+E       P+ V    +M+ + K G  E ++ +   M
Sbjct: 418 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 477

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G+ PD F YN LI G C A  MEEA  +  +M    + P+A TY     G+    ++
Sbjct: 478 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 537

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ------------ 232
             A +   ++L  G  P++  YT LI G+C+ GNV E   +   +LS+            
Sbjct: 538 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL 597

Query: 233 -----------------------GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
                                  G   N   Y+ L+S  CK G +D+A  LL EM   G+
Sbjct: 598 IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 657

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            PD+VTY+ILI GLCK  ++ +A  L++++  + ++PN   + A++ G C+ +  T A  
Sbjct: 658 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 717

Query: 330 YFDSLIMSNCIQDVVLYNI----------------------------------MIDGYVK 355
             + +++     D  +YN+                                  +I+GY K
Sbjct: 718 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCK 777

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G + EA  L  ++IEK+  P+ VT+ SLI   CK G + +A+RL   ++   + P+A T
Sbjct: 778 SGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKT 837

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           YT+ ++ Y   GN+  + AL +EM  K I P  +TY V+I   C++  + EA +L +++ 
Sbjct: 838 YTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEIL 897

Query: 476 VIGVTPDQ------ITYNTIIRSFCKCKDLRKAFQLLNQM----WLHNLEPTSATYNILI 525
           V G+           T + I R F    ++ +A ++L  M    W+ N    + +   L+
Sbjct: 898 VKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN----TTSLGDLV 953

Query: 526 DGLCVNGDLKNADCLL 541
           DG     + +++D LL
Sbjct: 954 DGNQNGANSEDSDNLL 969



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 158/628 (25%), Positives = 291/628 (46%), Gaps = 112/628 (17%)

Query: 62  NVYTNSIVIDGLCQQSR----LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           N   NS++ D L    R    L +A+         EF PS++S N+++    K    E+ 
Sbjct: 149 NGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELF 208

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             +F  M  + + PD ++Y  +I   C  G++++A     +MG                 
Sbjct: 209 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKA-------------- 254

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC----------------------- 214
             LL +   A ++ + ++ KG  PD+ TY +LI G+C                       
Sbjct: 255 -RLLDE---AIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPE 310

Query: 215 ------------QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
                       + G++E+  ++++ M++ G + N+I ++ LL+ +CK+G++++AL ++ 
Sbjct: 311 PITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 370

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE-- 320
           EM   G++PD  TYS+LI G C+   + +A +L +EM  ++++P    +  I+ GLC   
Sbjct: 371 EMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCG 430

Query: 321 ---------KEM------------------------ITEARMYFDSLIMSNCIQDVVLYN 347
                    +EM                        + E+RM  + +     + DV  YN
Sbjct: 431 NLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYN 490

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I G+ K   + EA     +++E+R+ P+  T+ + I G+ K G++  A R  + +   
Sbjct: 491 SLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC 550

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G+ P+   YT  +  +C+EGN+    ++ + + ++ +     TY+V+I GL +  K+ EA
Sbjct: 551 GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA 610

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
             +  ++   G+ P+  TYN++I   CK  ++ KA QLL +M +  + P   TYNILIDG
Sbjct: 611 FGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDG 670

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC  G+++ A  L   ++   ++   V Y  ++  +C   +   A     Q++E+     
Sbjct: 671 LCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAF----QLLEE----- 721

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVML 615
                      ML  G PPD  I  V+L
Sbjct: 722 -----------MLLRGVPPDAFIYNVIL 738



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 125/321 (38%), Gaps = 72/321 (22%)

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
           N   + V++++++D Y K+G + EAV ++         PS+++ NSL+    K  KV   
Sbjct: 149 NGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELF 208

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
            ++ D +  H + P   TYT                                    +I  
Sbjct: 209 WKVFDGMCAHKVLPDVYTYTN-----------------------------------MISA 233

Query: 458 LCKQWK-----------------LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            CK                    L EA++L   M   G+ PD  TY+ +I  FC  K  R
Sbjct: 234 HCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSR 293

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +A  +L +M    L+P   TYN LIDG    GD++ A  +   +    I    + + T++
Sbjct: 294 EAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLL 353

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
              C  G + KA+    +M+EKG E                    PD +   +++    +
Sbjct: 354 NGVCKAGKMEKALEIMQEMMEKGVE--------------------PDSQTYSLLIEGHCR 393

Query: 621 GGDLGSVFELAAVMIKSGLLP 641
           G ++   FEL   M K  L P
Sbjct: 394 GQNMARAFELLDEMKKRKLAP 414


>gi|9802759|gb|AAF99828.1|AC027134_10 Hypothetical protein [Arabidopsis thaliana]
          Length = 337

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 171/347 (49%), Positives = 223/347 (64%), Gaps = 37/347 (10%)

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
           M+ EAR   DSLI S    D+VLYNI+IDGY K G I EA++L++ +IE  I+PS+ TFN
Sbjct: 1   MLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFN 60

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           SLIYG+CK   +A+AR++LD IKL+GL PS V+YTT M+AY   GN + +  L +EM+ +
Sbjct: 61  SLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE 120

Query: 443 AIGPTHVTYTVVIKGLCKQWK-------LQEAV-----QLLEDMYVIGVTPDQITYNTII 490
            I PT+VTY+V+ KGLC+ WK       L+E +     Q L DM   G+ PDQITYNTII
Sbjct: 121 GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTII 180

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
           +  C+ K L  AF  L  M   NL+ +SATYNILID LCV G ++ AD  + SLQE N+S
Sbjct: 181 QYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVS 240

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------------TKSF 595
           L+K AYTT+IKAHC +GD   A+  F Q++ +GF +SIRDY               +K F
Sbjct: 241 LSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFF 300

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           FC+MLS G  PD +ICEVM+ +           EL +  IK GLLPD
Sbjct: 301 FCLMLSQGISPDLDICEVMIKS----------DELLSWTIKWGLLPD 337



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 142/307 (46%), Gaps = 12/307 (3%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A+ L   ++  G   D   YNI+I G   +G +EEALE    +   G+ P   T++ L  
Sbjct: 5   ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 64

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+     I+ A K++  + + G  P +V+YT L+  Y   GN +   +LR  M ++G   
Sbjct: 65  GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 124

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYE------------MEAVGLKPDLVTYSILIRGLC 284
             + YSV+   +C+  + +    +L E            ME+ G+ PD +TY+ +I+ LC
Sbjct: 125 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 184

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           +   +  A      M S+ +  +S  +  ++  LC    I +A  +  SL   N      
Sbjct: 185 RVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF 244

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            Y  +I  +   G+   AV+L+ QL+ +  + SI  ++++I   C+   V +++     +
Sbjct: 245 AYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLM 304

Query: 405 KLHGLEP 411
              G+ P
Sbjct: 305 LSQGISP 311



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/313 (21%), Positives = 145/313 (46%), Gaps = 12/313 (3%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L D +  S    ++   +IVIDG  +   +++A+   +        PSV + N+++  YC
Sbjct: 8   LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 67

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           K      A+ +  ++  YGL P   SY  L+      G+ +   E   +M   G+ P  +
Sbjct: 68  KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 127

Query: 170 TYSILAKGF----------HLLSQ--ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           TYS++ KG           H+L +       + ++ +  +G  PD +TY  +I   C++ 
Sbjct: 128 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 187

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
           ++       E+M S+    +   Y++L+ S+C  G I +A   +Y ++   +      Y+
Sbjct: 188 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 247

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            LI+  C +     A++L++++  +  + +   + A++  LC + ++ E++ +F  ++  
Sbjct: 248 TLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQ 307

Query: 338 NCIQDVVLYNIMI 350
               D+ +  +MI
Sbjct: 308 GISPDLDICEVMI 320



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 136/319 (42%), Gaps = 12/319 (3%)

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           EA    + +   G   D + Y+I+  G+     I  A ++ + ++  G  P + T+  LI
Sbjct: 4   EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 63

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            GYC+  N+ E  K+ +V+   G   +V++Y+ L+ +    G       L  EM+A G+ 
Sbjct: 64  YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 123

Query: 271 PDLVTYSILIRGLCKQDK------------VHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
           P  VTYS++ +GLC+  K              K  Q   +M S+ I P+   +  I+  L
Sbjct: 124 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 183

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C  + ++ A ++ + +   N       YNI+ID     G I +A      L E+ +S S 
Sbjct: 184 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 243

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
             + +LI   C  G    A +L   +   G   S   Y+  +N  C    +         
Sbjct: 244 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCL 303

Query: 439 METKAIGPTHVTYTVVIKG 457
           M ++ I P      V+IK 
Sbjct: 304 MLSQGISPDLDICEVMIKS 322



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 123/284 (43%), Gaps = 26/284 (9%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSE 58
           L + Y +T  + +A  ++  +K   L  S+ +Y +L+    N  +T  + +L  ++K   
Sbjct: 62  LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 121

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
            P    T S++  GLC+  + ++    L+E   ++               CK G  +   
Sbjct: 122 IPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK---------------CKQGLRD--- 163

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
                M   G+ PD  +YN +I  LC    +  A  F   M    ++  + TY+IL    
Sbjct: 164 -----MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 218

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
            +   I  A   I  L  +        YT LI  +C  G+ E  +KL   +L +GF +++
Sbjct: 219 CVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSI 278

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
             YS +++ +C+   ++E+      M + G+ PDL    ++I+ 
Sbjct: 279 RDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIKS 322



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 3/153 (1%)

Query: 33  TYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN++   L  ++H    +   + +K      +  T +I+ID LC    ++ A  F+   
Sbjct: 175 TYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 234

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             +    S  +   ++  +C  G  E+A  LF  +L  G +     Y+ +I+ LC    +
Sbjct: 235 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLV 294

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            E+  F   M   G+ PD     ++ K   LLS
Sbjct: 295 NESKFFFCLMLSQGISPDLDICEVMIKSDELLS 327


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 175/588 (29%), Positives = 295/588 (50%), Gaps = 21/588 (3%)

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           +  +K   T  N +T +++I+G C+  ++  A L L+E       P+VV+ + ++  +C+
Sbjct: 30  FAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCR 89

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
               + A  LF  M++ G  P+  +YN L+ GLC  G M+EA E  ++M   G++PD  +
Sbjct: 90  QTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFS 149

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y  L  G     +I  A KV +        PD+V Y+ LI G C+ G ++E  KL E M 
Sbjct: 150 YDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMR 209

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
               + +V+ ++ L+  +CK  R+ EA  +L  ME     P+++TYS LI GLCK  +V 
Sbjct: 210 ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVR 269

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A +++  M  + I PN   + +++ G C    +  A +  + +  + C+ D++ YN +I
Sbjct: 270 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 329

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           DG  K G   EA +L+  +  K  +P ++T++ LI GFCK  ++  AR L D +    + 
Sbjct: 330 DGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVL 389

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P  VT++T +  YC  G +     LL+EM      P   TYT ++ G CK  ++ EA ++
Sbjct: 390 PDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRV 449

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L+ M   G  P+ +TY  +I +FC+      A++LL +M  + ++P   TY  LI G C 
Sbjct: 450 LKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCG 509

Query: 531 NGDLKNADCLLVSLQ-EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            GDL+ A  +L  L+ + N      AY  ++   C  G +  A+    +++E        
Sbjct: 510 TGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAAL----ELLEA------- 558

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
                    +  +G PP  +I   ++    QG +LG   E+   M  S
Sbjct: 559 ---------IKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 597



 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 174/577 (30%), Positives = 292/577 (50%), Gaps = 4/577 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           +   + +A    AKMK+     +  TYN L+     +      + L  ++K S    NV 
Sbjct: 19  KANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVV 78

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S VI G C+Q+++  A    ++       P++V+ N ++S  C+ G  + A  L   M
Sbjct: 79  TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM 138

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + GL PD FSY+ L+ GLC  G ++ AL+   D       PD + YS L  G     ++
Sbjct: 139 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRL 198

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A K+ +K+     +PD+VT+T L+ G C+   ++E  ++ E M  +    NVI YS L
Sbjct: 199 DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSL 258

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +CK+G++ +A  +   M   G++P++VTY+ LI G C  + V  A+ L  EM +   
Sbjct: 259 IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC 318

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+   +  ++ GLC+     EA   F  +    C  DV+ Y+ +I G+ KL  I  A  
Sbjct: 319 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART 378

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+  ++++ + P +VTF++L+ G+C  G V DA RLL+ +      P   TYT+ ++ +C
Sbjct: 379 LFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFC 438

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G +     +L+ M  +   P  VTYT +I   C+  K   A +LLE+M   GV P+ I
Sbjct: 439 KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVI 498

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWL-HNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           TY ++I  FC   DL +A ++L ++    N +     Y +++DGLC  G +  A  LL +
Sbjct: 499 TYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEA 558

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           +++         Y  +I+  C   ++ KAM    +M 
Sbjct: 559 IKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMT 595



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 166/569 (29%), Positives = 291/569 (51%), Gaps = 11/569 (1%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHT--DIMWDLYDDIKVSETPRNVYTNSI 68
           VH A  ++ +MKE  L  ++ TY+++++   R T  D  + L+  +  +    N+ T + 
Sbjct: 58  VHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNT 117

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++ GLC+   + +A   L E   +   P   S + +M+  CK G  ++A  +F       
Sbjct: 118 LLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD 177

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  +Y+ LI GLC  G ++EA +    M  +  EPD +T++ L  G     ++  A 
Sbjct: 178 CPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 237

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +V++ +  +   P+++TY+ LI G C+ G V +  ++ + M+ +G + NV+ Y+ L+   
Sbjct: 238 QVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 297

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C +  +D AL L+ EM A G  PD++TY+ LI GLCK  +  +A +L+ +M +K  +P+ 
Sbjct: 298 CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDV 357

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  ++ G C+ E I  AR  FD ++    + DVV ++ +++GY   G + +A +L  +
Sbjct: 358 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 417

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           ++    SP + T+ SL+ GFCK G++ +ARR+L  +   G +P+ VTYT  ++A+C  G 
Sbjct: 418 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 477

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI-GVTPDQITYN 487
                 LL+EM    + P  +TY  +I G C    L+EA ++LE +        D   Y 
Sbjct: 478 PTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYR 537

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++   C+   +  A +LL  +      P    Y  LI GLC   +L  A   +  L+E 
Sbjct: 538 VMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKA---MEVLEEM 594

Query: 548 NISLTKV----AYTTIIKAHCAEGDVHKA 572
            +S        AY  +I+    EG   +A
Sbjct: 595 TLSRKSRPNAEAYEAVIQELAREGRHEEA 623



 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 271/534 (50%), Gaps = 35/534 (6%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E  +NV T +I+IDGLC+ +RL +A  +                                
Sbjct: 2   ECEKNVITWTIMIDGLCKANRLPEATTY-------------------------------- 29

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              F  M K G  P+ ++YN+LI+G C    +  A     +M   G+ P+ +TYS +  G
Sbjct: 30  ---FAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHG 86

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F   +++  A+K+ ++++  G  P++VTY  L+ G C+ G ++E  +L + M  +G + +
Sbjct: 87  FCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPD 146

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
             +Y  L++ +CK+G+ID AL +  +       PD+V YS LI GLCK  ++ +A +L+ 
Sbjct: 147 KFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFE 206

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M      P+     A++ GLC+ + + EA+   +++   NC  +V+ Y+ +IDG  K G
Sbjct: 207 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTG 266

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + +A ++++++I + I P++VT+NSLI+GFC    V  A  L++ +   G  P  +TY 
Sbjct: 267 QVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYN 326

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T ++  C+ G       L  +M+ K   P  +TY+ +I G CK  ++  A  L +DM   
Sbjct: 327 TLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 386

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
            V PD +T++T++  +C    +  A +LL +M   +  P   TY  L+DG C  G +  A
Sbjct: 387 AVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEA 446

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
             +L  + +       V YT +I A C  G    A     +MV  G + ++  Y
Sbjct: 447 RRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITY 500



 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 151/508 (29%), Positives = 267/508 (52%), Gaps = 15/508 (2%)

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           +  ++ I+I GLC A  + EA  +   M + G  P+  TY++L  GF  + ++  A+ ++
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           +++   G  P++VTY+ +I G+C+   V+   KL   M+  G   N++ Y+ LLS +C++
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G +DEA  LL EM   GL+PD  +Y  L+ GLCK  K+  A++++ +  +    P+  A+
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++ GLC+   + EA   F+ +  ++C  DVV +  ++DG  K   + EA Q+   + +
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           +  +P+++T++SLI G CK G+V DA+ +   + + G+EP+ VTY + ++ +C    +  
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            L L++EM      P  +TY  +I GLCK  +  EA +L  DM      PD ITY+ +I 
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            FCK + +  A  L + M    + P   T++ L++G C  G + +A+ LL  +   + S 
Sbjct: 366 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 425

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM----------- 598
               YT+++   C  G + +A     +M ++G + ++  YT     FC            
Sbjct: 426 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLL 485

Query: 599 --MLSNGFPPDQEICEVMLIAFHQGGDL 624
             M+ NG  P+      ++  F   GDL
Sbjct: 486 EEMVGNGVQPNVITYRSLIGGFCGTGDL 513



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 240/493 (48%), Gaps = 15/493 (3%)

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
           E + IT++I+  G    +++  A     K+  KG+ P+  TY VLI G+C++  V     
Sbjct: 4   EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L + M   G   NV+ YS ++   C+  ++D A  L  +M   G  P+LVTY+ L+ GLC
Sbjct: 64  LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           +   + +A +L +EM  + + P+ F++  ++ GLC+   I  A   F+     +C  DVV
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            Y+ +I G  K G + EA +L+ ++ E    P +VTF +L+ G CK  ++ +A+++L+T+
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           +     P+ +TY++ ++  C+ G ++    + + M  + I P  VTY  +I G C    +
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
             A+ L+E+M   G  PD ITYNT+I   CK     +A +L   M      P   TY+ L
Sbjct: 304 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 363

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           I G C    +  A  L   + +  +    V ++T+++ +C  G V  A     +MV    
Sbjct: 364 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 423

Query: 585 EISIRDYTK--SFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
              +  YT     FC              M   G  P+      ++ AF + G     ++
Sbjct: 424 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYK 483

Query: 630 LAAVMIKSGLLPD 642
           L   M+ +G+ P+
Sbjct: 484 LLEEMVGNGVQPN 496



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 186/368 (50%), Gaps = 5/368 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVY 64
           +TG V DA  V  +M    ++ ++ TYNSL++    T   D    L +++  +    ++ 
Sbjct: 264 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 323

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +IDGLC+  R  +A     +   K   P V++ + ++  +CKL   ++A+ LF  M
Sbjct: 324 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 383

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           LK  + PD  +++ L+ G C AG +++A     +M      PD  TY+ L  GF  + ++
Sbjct: 384 LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRM 443

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +V++++  +G  P++VTYT LI  +C+ G      KL E M+  G + NVI Y  L
Sbjct: 444 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSL 503

Query: 245 LSSMCKSGRIDEALGLLYEMEA-VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +   C +G ++EA  +L  +E     K D+  Y +++ GLC+  ++  A++L   +    
Sbjct: 504 IGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG 563

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEA 362
             P    + A++ GLC+ + + +A    + + +S   + +   Y  +I    + G   EA
Sbjct: 564 TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 623

Query: 363 VQLYRQLI 370
             L  +L+
Sbjct: 624 NALADELL 631



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 170/335 (50%), Gaps = 5/335 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           +  T  V  A+ ++ +M        I TYN+L+  L  T    +   L+ D+K      +
Sbjct: 297 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPD 356

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T S +I G C+  R+  A     +   +   P VV+ + ++  YC  G  + A+ L  
Sbjct: 357 VITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLE 416

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+     PD ++Y  L+ G C  G M EA      M + G +P+ +TY+ L   F    
Sbjct: 417 EMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 476

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM-LSQGFKLNVIAY 241
           + + A+K++++++  G  P+++TY  LI G+C  G++EE  K+ E +   +  K ++ AY
Sbjct: 477 KPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAY 536

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC- 300
            V++  +C++GR+  AL LL  ++  G  P    Y  LIRGLC+  ++ KA+++  EM  
Sbjct: 537 RVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTL 596

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           S++  PN+ A+ A++  L  +    EA    D L+
Sbjct: 597 SRKSRPNAEAYEAVIQELAREGRHEEANALADELL 631



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 145/300 (48%), Gaps = 35/300 (11%)

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           C ++V+ + IMIDG  K   + EA   + ++ +K   P+  T+N LI GFCK  KV  A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            LL  +K  GL P+ VTY+T ++ +C +  +     L ++M      P  VTY  ++ GL
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK----------------------- 495
           C+   + EA +LL++M   G+ PD+ +Y+T++   CK                       
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 496 ----------CKDLR--KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
                     CK  R  +A +L  +M  ++ EP   T+  L+DGLC    L+ A  +L +
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           +++ N +   + Y+++I   C  G V  A   F +M+ +G E ++  Y        ++NG
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 175/588 (29%), Positives = 295/588 (50%), Gaps = 21/588 (3%)

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           +  +K   T  N +T +++I+G C+  ++  A L L+E       P+VV+ + ++  +C+
Sbjct: 149 FAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCR 208

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
               + A  LF  M++ G  P+  +YN L+ GLC  G M+EA E  ++M   G++PD  +
Sbjct: 209 QTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFS 268

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y  L  G     +I  A KV +        PD+V Y+ LI G C+ G ++E  KL E M 
Sbjct: 269 YDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMR 328

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
               + +V+ ++ L+  +CK  R+ EA  +L  ME     P+++TYS LI GLCK  +V 
Sbjct: 329 ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVR 388

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A +++  M  + I PN   + +++ G C    +  A +  + +  + C+ D++ YN +I
Sbjct: 389 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 448

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           DG  K G   EA +L+  +  K  +P ++T++ LI GFCK  ++  AR L D +    + 
Sbjct: 449 DGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVL 508

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P  VT++T +  YC  G +     LL+EM      P   TYT ++ G CK  ++ EA ++
Sbjct: 509 PDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRV 568

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L+ M   G  P+ +TY  +I +FC+      A++LL +M  + ++P   TY  LI G C 
Sbjct: 569 LKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCG 628

Query: 531 NGDLKNADCLLVSLQ-EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            GDL+ A  +L  L+ + N      AY  ++   C  G +  A+    +++E        
Sbjct: 629 TGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAAL----ELLEA------- 677

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
                    +  +G PP  +I   ++    QG +LG   E+   M  S
Sbjct: 678 ---------IKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 716



 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 174/577 (30%), Positives = 292/577 (50%), Gaps = 4/577 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           +   + +A    AKMK+     +  TYN L+     +      + L  ++K S    NV 
Sbjct: 138 KANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVV 197

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S VI G C+Q+++  A    ++       P++V+ N ++S  C+ G  + A  L   M
Sbjct: 198 TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM 257

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + GL PD FSY+ L+ GLC  G ++ AL+   D       PD + YS L  G     ++
Sbjct: 258 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRL 317

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A K+ +K+     +PD+VT+T L+ G C+   ++E  ++ E M  +    NVI YS L
Sbjct: 318 DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSL 377

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +CK+G++ +A  +   M   G++P++VTY+ LI G C  + V  A+ L  EM +   
Sbjct: 378 IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC 437

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+   +  ++ GLC+     EA   F  +    C  DV+ Y+ +I G+ KL  I  A  
Sbjct: 438 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART 497

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+  ++++ + P +VTF++L+ G+C  G V DA RLL+ +      P   TYT+ ++ +C
Sbjct: 498 LFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFC 557

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G +     +L+ M  +   P  VTYT +I   C+  K   A +LLE+M   GV P+ I
Sbjct: 558 KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVI 617

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWL-HNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           TY ++I  FC   DL +A ++L ++    N +     Y +++DGLC  G +  A  LL +
Sbjct: 618 TYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEA 677

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           +++         Y  +I+  C   ++ KAM    +M 
Sbjct: 678 IKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMT 714



 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 177/613 (28%), Positives = 304/613 (49%), Gaps = 21/613 (3%)

Query: 30  SIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           ++ TYN L   L   R  D    +  +        NV+T ++VI GLC+   L  A   L
Sbjct: 23  NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           +E       P     N ++   CK      A   F  M       +  ++ I+I GLC A
Sbjct: 83  EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM---ECEKNVITWTIMIDGLCKA 139

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
             + EA  +   M + G  P+  TY++L  GF  + ++  A+ +++++   G  P++VTY
Sbjct: 140 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 199

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           + +I G+C+   V+   KL   M+  G   N++ Y+ LLS +C++G +DEA  LL EM  
Sbjct: 200 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 259

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            GL+PD  +Y  L+ GLCK  K+  A++++ +  +    P+  A+  ++ GLC+   + E
Sbjct: 260 RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDE 319

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A   F+ +  ++C  DVV +  ++DG  K   + EA Q+   + ++  +P+++T++SLI 
Sbjct: 320 ACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLID 379

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G CK G+V DA+ +   + + G+EP+ VTY + ++ +C    +   L L++EM      P
Sbjct: 380 GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLP 439

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             +TY  +I GLCK  +  EA +L  DM      PD ITY+ +I  FCK + +  A  L 
Sbjct: 440 DIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLF 499

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           + M    + P   T++ L++G C  G + +A+ LL  +   + S     YT+++   C  
Sbjct: 500 DDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKV 559

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEIC 611
           G + +A     +M ++G + ++  YT     FC              M+ NG  P+    
Sbjct: 560 GRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITY 619

Query: 612 EVMLIAFHQGGDL 624
             ++  F   GDL
Sbjct: 620 RSLIGGFCGTGDL 632



 Score =  288 bits (738), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 167/575 (29%), Positives = 294/575 (51%), Gaps = 11/575 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHT--DIMWDLYDDIKVSETPRN 62
           + +   VH A  ++ +MKE  L  ++ TY+++++   R T  D  + L+  +  +    N
Sbjct: 171 FCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPN 230

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T + ++ GLC+   + +A   L E   +   P   S + +M+  CK G  ++A  +F 
Sbjct: 231 LVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFE 290

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
                   PD  +Y+ LI GLC AG ++EA +    M  +  EPD +T++ L  G     
Sbjct: 291 DNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGD 350

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A +V++ +  +   P+++TY+ LI G C+ G V +  ++ + M+ +G + NV+ Y+
Sbjct: 351 RLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYN 410

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C +  +D AL L+ EM A G  PD++TY+ LI GLCK  +  +A +L+ +M +K
Sbjct: 411 SLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 470

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             +P+   +  ++ G C+ E I  AR  FD ++    + DVV ++ +++GY   G + +A
Sbjct: 471 FCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDA 530

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +L  +++    SP + T+ SL+ GFCK G++ +ARR+L  +   G +P+ VTYT  ++A
Sbjct: 531 ERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDA 590

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI-GVTP 481
           +C  G       LL+EM    + P  +TY  +I G C    L+EA ++LE +        
Sbjct: 591 FCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKA 650

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D   Y  ++   C+   +  A +LL  +      P    Y  LI GLC   +L  A   +
Sbjct: 651 DMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKA---M 707

Query: 542 VSLQEHNISLTKV----AYTTIIKAHCAEGDVHKA 572
             L+E  +S        AY  +I+    EG   +A
Sbjct: 708 EVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 742



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 249/532 (46%), Gaps = 18/532 (3%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G   + ++YN L   L  A  ++E      +    G+ P+  TY+++ +G      +  A
Sbjct: 19  GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++++++   G  PD   Y  +I   C+  N  + L   +   S   + NVI +++++  
Sbjct: 79  CELLEEMRESGPVPDAAIYNFVIHALCKARNTAKAL---DYFRSMECEKNVITWTIMIDG 135

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK+ R+ EA     +M+  G  P+  TY++LI G CK  KVH+A  L  EM    ++PN
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 195

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  ++ G C +  +  A   F  ++ + C+ ++V YN ++ G  + G + EA +L  
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 255

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++ E+ + P   ++++L+ G CK GK+  A ++ +        P  V Y+T +   C+ G
Sbjct: 256 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG 315

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            +     L ++M   +  P  VT+T ++ GLCK  +LQEA Q+LE M     TP+ ITY+
Sbjct: 316 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 375

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           ++I   CK   +R A ++  +M +  +EP   TYN LI G C+   + +A  L+  +   
Sbjct: 376 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 435

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK--------------GF-EISIRDYT 592
                 + Y T+I   C  G   +A   F  M  K              GF ++   D  
Sbjct: 436 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMA 495

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           ++ F  ML     PD      ++  +   G +     L   M+ S   PD +
Sbjct: 496 RTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVY 547



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 207/408 (50%), Gaps = 5/408 (1%)

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           +G D ++ TY  L     +   ++E   + +     G   NV  Y+V++  +CKSG +D+
Sbjct: 18  QGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDK 77

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM-CSKRISPNSFAHGAIL 315
           A  LL EM   G  PD   Y+ +I  LCK     KA+  +  M C K    N      ++
Sbjct: 78  ACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEK----NVITWTIMI 133

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            GLC+   + EA  YF  +     + +   YN++I+G+ K+  +  A  L +++ E  ++
Sbjct: 134 DGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLA 193

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P++VT++++I+GFC+  KV  A +L   +  +G  P+ VTY T ++  C  G +     L
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 253

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           L EM  + + P   +Y  ++ GLCK  K+  A+++ ED       PD + Y+T+I   CK
Sbjct: 254 LDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCK 313

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              L +A +L  +M  ++ EP   T+  L+DGLC    L+ A  +L ++++ N +   + 
Sbjct: 314 AGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVIT 373

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           Y+++I   C  G V  A   F +M+ +G E ++  Y        ++NG
Sbjct: 374 YSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 421



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 186/368 (50%), Gaps = 5/368 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVY 64
           +TG V DA  V  +M    ++ ++ TYNSL++    T   D    L +++  +    ++ 
Sbjct: 383 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 442

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +IDGLC+  R  +A     +   K   P V++ + ++  +CKL   ++A+ LF  M
Sbjct: 443 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 502

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           LK  + PD  +++ L+ G C AG +++A     +M      PD  TY+ L  GF  + ++
Sbjct: 503 LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRM 562

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +V++++  +G  P++VTYT LI  +C+ G      +L E M+  G + NVI Y  L
Sbjct: 563 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSL 622

Query: 245 LSSMCKSGRIDEALGLLYEMEA-VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +   C +G ++EA  +L  +E     K D+  Y +++ GLC+  ++  A++L   +    
Sbjct: 623 IGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG 682

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEA 362
             P    + A++ GLC+ + + +A    + + +S   + +   Y  +I    + G   EA
Sbjct: 683 TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 742

Query: 363 VQLYRQLI 370
             L  +L+
Sbjct: 743 NALADELL 750



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 102/255 (40%), Gaps = 18/255 (7%)

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           K  G + +  TY     A      I     +L+      I P   TY VVI+GLCK   L
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            +A +LLE+M   G  PD   YN +I + CK ++  KA      M     E    T+ I+
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM---ECEKNVITWTIM 132

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           IDGLC    L  A      +++      +  Y  +I   C    VH+A     +M E G 
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGL 192

Query: 585 EISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
             ++  Y+                  F  M+ NG  P+      +L    + G +   +E
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE 252

Query: 630 LAAVMIKSGLLPDKF 644
           L   M + GL PDKF
Sbjct: 253 LLDEMRERGLQPDKF 267


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  308 bits (789), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 195/684 (28%), Positives = 328/684 (47%), Gaps = 64/684 (9%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY-NLRHTDI--MWDLYDDIKVS 57
           +L   + +TG + DA+ +   +   D       YN++++ + R  D     +   ++   
Sbjct: 200 ILTRAFCKTGRLKDALEIFRNIPSPD----AIAYNAIIHGHCRKNDCDGALEFLKEMNER 255

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           +   +V+T +I+IDGLC+ S+   A   L E   +   P  V+ N+IM   CK G  E A
Sbjct: 256 KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 315

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L  +M +    P   +YN LI GLC   +++ A +  ++    G  PD +TYSILA G
Sbjct: 316 HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADG 375

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                +I  A+++++++  KG  P++VTY  LI G C+    E+  +L E ++S GF  +
Sbjct: 376 LCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPD 435

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V+ Y++++  +CK GR+D+AL ++  M   G  P ++TY+ L+ GLC+  +V +A  ++ 
Sbjct: 436 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 495

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARM---------------------------- 329
           EM SK  + ++ A+ +++ G C+     EA+                             
Sbjct: 496 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLD 555

Query: 330 ----YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
                F+ +    C+ ++  YNI++DG  K G + EA      +      P +V++N +I
Sbjct: 556 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 615

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G  K  K  +AR++LD +   G+ P AVTY T M  +C+E      + +L+ M    + 
Sbjct: 616 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVD 675

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-VTPDQITYNTIIRSFCKCKDLRKAFQ 504
           P +VTY  +I GL +  +L +A +L+ +M   G V     TYNTII   CK   L++A  
Sbjct: 676 PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALL 735

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           L++ M  H +E  + TYNI ID LC  G L  A  L   L E +    +V+YTT+I   C
Sbjct: 736 LMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL---LSEMDTLRDEVSYTTVIIGLC 792

Query: 565 AEGDVHKAMTFFCQMVE-KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
               + +A     +MV  KG  I+   +                     +++ AF +   
Sbjct: 793 KAEQLDRASKLAREMVAVKGLCITSHTFN--------------------LLIDAFTKTKR 832

Query: 624 LGSVFELAAVMIKSGLLPDKFLIN 647
           L     L  +M++ G  P     N
Sbjct: 833 LDEALTLLGLMVQRGCSPSVITYN 856



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 163/577 (28%), Positives = 273/577 (47%), Gaps = 27/577 (4%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + YT  +VI  LCQ +++  A   L +   + F P V     +   +CK G  + A  +F
Sbjct: 159 DSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF 218

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
               +    PDA +YN +IHG C     + ALEF  +M    V PD  TY+IL  G    
Sbjct: 219 ----RNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKA 274

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           S+   A +++ +++ +G  PD VT+  ++ G C+ G  E    L  VM  +  + +   Y
Sbjct: 275 SKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTY 334

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+S +CK   +D A  L+ E  + G  PD+VTYSIL  GLCK+ ++ +A +L  EM  
Sbjct: 335 NTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSG 394

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K  +PN   +  ++ GLC+     +A    +SL+ S  + DVV Y I++DG  K G + +
Sbjct: 395 KGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDK 454

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+++   ++++  +PS++T+ +L+ G C+ G+V +A  +   +        A+ Y + +N
Sbjct: 455 ALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVN 514

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC+    +    ++  +      P    Y  ++ G CK+ +L E   + EDM   G  P
Sbjct: 515 GYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVP 571

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +  TYN ++   CK   + +AF  L  M      P   +YNI+IDGL      K A  +L
Sbjct: 572 NIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVL 631

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
             + +  I    V Y T++   C E     A+     M++ G +                
Sbjct: 632 DQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVD---------------- 675

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
               PD      ++    Q   LG  +EL   M+++G
Sbjct: 676 ----PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 708



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 194/660 (29%), Positives = 309/660 (46%), Gaps = 77/660 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWD-LYDDIKVSETPR 61
           + R      A+  + +M E  +   + TYN L+  L     TD   + L++ +    TP 
Sbjct: 236 HCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPD 295

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V  NSI +DGLC+  + + A   L   A +   PS  + N ++S  CK    + AK L 
Sbjct: 296 TVTFNSI-MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLV 354

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              +  G  PD  +Y+IL  GLC  G ++EA E   +M   G  P+ +TY+ L  G    
Sbjct: 355 DEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKA 414

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           S+   A+++++ L+  G  PD+VTYT+++ G C+ G +++ LK+ E ML +G   +VI Y
Sbjct: 415 SKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITY 474

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA--------- 292
           + L+  +C++GR+DEA  +  EM +     D + Y  L+ G CK  +  +A         
Sbjct: 475 TALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG 534

Query: 293 ---IQLYN--------------------EMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
              I +YN                    +M  +   PN   +  ++ GLC+   + EA  
Sbjct: 535 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 594

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
           + +S+  + C+ DVV YNI+IDG  K     EA Q+  Q+I+  I P  VT+N+L+  FC
Sbjct: 595 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 654

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFM----------NAY---------------- 423
           K  +  DA  +L  +   G++P  VTY T +          +AY                
Sbjct: 655 KEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSAC 714

Query: 424 ----------CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
                     C+EG +++ L L+  M    +    VTY + I  LCK+ +L EA  LL +
Sbjct: 715 TTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSE 774

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM-WLHNLEPTSATYNILIDGLCVNG 532
           M  +    D+++Y T+I   CK + L +A +L  +M  +  L  TS T+N+LID      
Sbjct: 775 MDTLR---DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTK 831

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            L  A  LL  + +   S + + Y  +I   C    V KA   F +M  +G   S   YT
Sbjct: 832 RLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYT 891



 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 177/616 (28%), Positives = 300/616 (48%), Gaps = 40/616 (6%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G    A  ++A M E + + S  TYN+L+  L   ++ D   DL D+   S    +V 
Sbjct: 308 KAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVV 367

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T SI+ DGLC++ R+ +A   ++E +GK   P++V+ N ++   CK    E A  L   +
Sbjct: 368 TYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESL 427

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G  PD  +Y I++ GLC  G +++AL+    M + G  P  ITY+ L +G     ++
Sbjct: 428 VSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRV 487

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR------------------ 226
             A  + ++++ K    D + Y  L+ GYC+    +E  K+                   
Sbjct: 488 DEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDG 547

Query: 227 --------------EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
                         E M  +G   N+  Y++++  +CK G++DEA   L  M + G  PD
Sbjct: 548 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 607

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +V+Y+I+I GL K  K  +A Q+ ++M    I P++  +  ++   C++E   +A     
Sbjct: 608 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 667

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR-ISPSIVTFNSLIYGFCKN 391
           ++I +    D V YN +I G  +   +G+A +L  +++    +  +  T+N++I   CK 
Sbjct: 668 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 727

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G +  A  L+D +  HG+E + VTY  F++  C+EG +    +LL EM+T       V+Y
Sbjct: 728 GCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSY 784

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVI-GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           T VI GLCK  +L  A +L  +M  + G+     T+N +I +F K K L +A  LL  M 
Sbjct: 785 TTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMV 844

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
                P+  TYN++I  LC    +  A  L   +    I  + V+YT +I   C +G   
Sbjct: 845 QRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGK 904

Query: 571 KAMTFFCQMVEKGFEI 586
           +A+    +M     EI
Sbjct: 905 EALQVLEEMASSDCEI 920



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 150/583 (25%), Positives = 276/583 (47%), Gaps = 22/583 (3%)

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
           Q AI+F      + F  S  + N  +    + G ++    +F  ML  G  PD+++Y+++
Sbjct: 107 QTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLV 166

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           I  LC    +++A    +     G +P+   Y+IL + F    ++  A ++ + +     
Sbjct: 167 IKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI----P 222

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            PD + Y  +I G+C+  + +  L+  + M  +    +V  Y++L+  +CK+ + D+A  
Sbjct: 223 SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASE 282

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           +L+EM   G+ PD VT++ ++ GLCK  K  +A  L   M  +   P+   +  ++ GLC
Sbjct: 283 MLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLC 342

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           +++ +  A+   D  + S  + DVV Y+I+ DG  K G I EA +L +++  K  +P++V
Sbjct: 343 KQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLV 402

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T+N+LI G CK  K   A  LL+++   G  P  VTYT  ++  C+EG + + L +++ M
Sbjct: 403 TYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM 462

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
             +   P+ +TYT +++GLC+  ++ EA  + ++M     T D + Y +++  +CK    
Sbjct: 463 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRT 522

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
           ++A ++++ +      P    YN L+DG C  G L     +   +           Y  +
Sbjct: 523 KEAQKVVDGI---RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIV 579

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKG---------------FEISIRDYTKSFFCMMLSNGF 604
           +   C  G V +A  F   M   G               F+ S     +     M+  G 
Sbjct: 580 MDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI 639

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           PPD      ++  F +         +   MIK+G+ PD    N
Sbjct: 640 PPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYN 682



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 41/267 (15%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRN------VYTNS 67
           DAV ++  M +  +     TYN+L+  L  T+ + D Y+   + E  RN        T +
Sbjct: 661 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYE--LMHEMLRNGCVVSACTTYN 718

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM--- 124
            +ID LC++  L+ A+L +    G     + V+ N  + R CK G  + A  L   M   
Sbjct: 719 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL 778

Query: 125 ---LKY---------------------------GLHPDAFSYNILIHGLCIAGSMEEALE 154
              + Y                           GL   + ++N+LI        ++EAL 
Sbjct: 779 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALT 838

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
               M + G  P  ITY+++      L ++  AW++  ++ ++G     V+YTVLI G C
Sbjct: 839 LLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLC 898

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAY 241
             G  +E L++ E M S   +++ + +
Sbjct: 899 GQGRGKEALQVLEEMASSDCEIDDLKW 925



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 58/112 (51%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T +++ID   +  RL +A+  L     +   PSV++ N +++  CKL   + A  LF  
Sbjct: 818 HTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDE 877

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
           M   G+   + SY +LI+GLC  G  +EAL+   +M     E D + +  +A
Sbjct: 878 MAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDVA 929


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 170/526 (32%), Positives = 281/526 (53%), Gaps = 7/526 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T +I I GLC+ SR+ DA           F P+ ++ NA++S  C  G    A+ L+
Sbjct: 49  DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALY 108

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+K G  PD  +YN L+HG C  G ++EAL+  +   + G  PD +TY+ L  GF   
Sbjct: 109 ERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKA 168

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A +++Q+++ +   PD+VTY  L+ G C+ G V+E    R +++ +GF  NVI Y
Sbjct: 169 DKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEA---RMLIVDKGFSPNVITY 225

Query: 242 SVLLSSMCKS-GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           S L+S +C+   R++ A  LL +M   G KPD+V+Y+ LI GL ++  V +A++L+  + 
Sbjct: 226 STLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVL 285

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            +   P    +  ++ GL +++ + EA   F  L+      D + Y + IDG  K G + 
Sbjct: 286 RQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 345

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A+ + + + EK   P +V+ N++I G CK  +V +A  LL  ++  G  P+A+++ T +
Sbjct: 346 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 405

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK---QWKLQEAVQLLEDMYVI 477
              C  G  ++ +   +EM  + + PT VTY +++ GLCK   + +++EA+ L + M   
Sbjct: 406 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK 465

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G  PD +TY+ +I    K   L  A +LL  M      P   TYN LI GLC    +  A
Sbjct: 466 GRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEA 525

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             L V++ E       + Y TII A C +  V KA+  F   +E G
Sbjct: 526 LELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAG 571



 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 171/530 (32%), Positives = 279/530 (52%), Gaps = 12/530 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDD-IKVSETPRNV 63
           R   + DA  V   M++     +  TYN+LL  L +   M D   LY+  IK   +P +V
Sbjct: 62  RASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSP-DV 120

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + ++ G C+  +L +A+        + F P VV+ NA+++ +CK    + A+ +   
Sbjct: 121 VTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 180

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF-HLLS 182
           M+   L PD  +YN L++GLC  G ++EA     D    G  P+ ITYS L  G    L 
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELR 237

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A ++++K+++ G  PDIV+Y  LI G  +   V E LKL   +L QG++  V  Y+
Sbjct: 238 RLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYN 297

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L+  + K  R++EA  L   +   GL+PD +TY++ I GLCK  +V  A+ +  +M  K
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 357

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P+  +H A++ GLC+++ + EA +    +    C  + + +N +I G  + G   +A
Sbjct: 358 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 417

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCK---NGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           +  +++++++ + P++VT+N L+ G CK    G++ +A  L D +   G  P  VTY+  
Sbjct: 418 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSAL 477

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++   + G +     LL  ME K   P   TY  +I GLC   K+ EA++L   M   G 
Sbjct: 478 IDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGC 537

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
            PD ITY TII + CK + + KA  L +      + PTS  Y  LIDGLC
Sbjct: 538 VPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLC 587



 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 160/494 (32%), Positives = 264/494 (53%), Gaps = 8/494 (1%)

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           + P   ++  ++    K G  E A      +L  GL  D  ++NI I GLC A  + +A 
Sbjct: 12  YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQ 70

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
              + M +HG  P+ ITY+ L  G     ++S A  + ++++  G  PD+VTY  L+ G+
Sbjct: 71  TVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C++G ++E LK+ +  + +GF  +V+ Y+ L++  CK+ ++DEA  +L  M +  L PD+
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDV 190

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC-EKEMITEARMYFD 332
           VTY+ L+ GLCK  +V +A  L   +  K  SPN   +  ++ GLC E   +  AR   +
Sbjct: 191 VTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLE 247

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            ++++ C  D+V YN +I G  +   + EA++L+  ++ +   P + T+N LI G  K  
Sbjct: 248 KMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKED 307

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           +V +A  L   +  HGLEP A+TYT F++  C+ G ++  L +L++M+ K   P  V++ 
Sbjct: 308 RVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHN 367

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            VI GLCK+ ++ EA  LL  M   G +P+ I++NT+I   C+    +KA     +M   
Sbjct: 368 AVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR 427

Query: 513 NLEPTSATYNILIDGLCV---NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
            ++PT  TYNIL+DGLC     G +K A  L  ++ E       V Y+ +I      G +
Sbjct: 428 GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKL 487

Query: 570 HKAMTFFCQMVEKG 583
             A      M  KG
Sbjct: 488 DDARRLLGAMEAKG 501



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/475 (31%), Positives = 253/475 (53%), Gaps = 12/475 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIK--VSET--PR 61
           + + G + +A+ +     +      + TYN+L+      D + +    ++  VSE+  P 
Sbjct: 130 FCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPD 189

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK-LGFAEVAKGL 120
            V  NS+V +GLC+  R+ +A + + +   K F P+V++ + ++S  C+ L   E A+ L
Sbjct: 190 VVTYNSLV-NGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQL 245

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M+  G  PD  SYN LIHGL     + EAL+    + R G EP+  TY+IL  G   
Sbjct: 246 LEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLK 305

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +++ A+++   L+  G +PD +TYTV I G C+ G VE+ L + + M  +G   +V++
Sbjct: 306 EDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVS 365

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++ +++ +CK  R+DEA  LL  MEA G  P+ ++++ LI G C+  K  KA+  + EM 
Sbjct: 366 HNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 425

Query: 301 SKRISPNSFAHGAILLGLCEKEM---ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            + + P    +  ++ GLC+      I EA   FD++I    + DVV Y+ +IDG  K G
Sbjct: 426 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG 485

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + +A +L   +  K   P++ T+NSLI G C   KV +A  L   +   G  P  +TY 
Sbjct: 486 KLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYG 545

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
           T ++A C++  + + LAL        + PT   Y  +I GLC   ++ EA++LL+
Sbjct: 546 TIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 21/197 (10%)

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P   T  ++++ L K  K+++A + +E + V G+  D  T+N  I   C+   +  A  +
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTV 72

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
            + M  H   P   TYN L+ GLC  G + +A  L   + +   S   V Y T++   C 
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
            G + +A+  F   V++GF   +  Y        L NGF    ++ E   I         
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYN------ALINGFCKADKLDEAQRILQR------ 180

Query: 626 SVFELAAVMIKSGLLPD 642
                   M+   L+PD
Sbjct: 181 --------MVSESLVPD 189



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 21/163 (12%)

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +PD  T   ++RS  K   + KA + + Q+ +  L   S T+NI I GLC    + +A  
Sbjct: 13  SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDIS-TFNIYISGLCRASRIGDAQT 71

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           +   +++H     ++ Y  ++   C  G +  A   + +M++ G+               
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYS-------------- 117

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                 PD      +L  F + G L    ++    +K G +PD
Sbjct: 118 ------PDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPD 154


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 175/586 (29%), Positives = 301/586 (51%), Gaps = 3/586 (0%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVS 57
           +L   Y + G V  A  V+  M +L L  + +  N LL +L   D M   W L   ++ +
Sbjct: 180 VLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGA 239

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
             P +VYT S  ++  C+      A    +E   ++   + V+ N ++S  C+ G  E A
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
            G    M+ YGL PDAF+Y  L++GLC  G ++EA    ++M   G++P+ + Y+ L  G
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    + + A+ ++ +++  G  P+ + Y  LI G C+IG +    KL   M+  G + +
Sbjct: 360 FMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPD 419

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              Y  L+    +    D A  LL EM   G+ P+  TY I+I GLC+  +  +A  L  
Sbjct: 420 TFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLE 479

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM S+ + PN+F +  +++G  ++  I+ A    +++  +N + D+  YN +I G   +G
Sbjct: 480 EMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVG 539

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            I EA + Y Q+ ++ + P   T++ LI+G+CK   +  A +LL  +   GL+P+A TYT
Sbjct: 540 RIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYT 599

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +  Y +  + +++ ++LQ M      P +  Y +VI+ L +   ++ A  +L ++   
Sbjct: 600 DLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKN 659

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD   Y+++I   CK  D+ KA  LL++M    LEP    YN LIDG C +GD+  A
Sbjct: 660 GLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRA 719

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             +  S+    +    V YT +I  +C  GD+  A   +  M+++G
Sbjct: 720 RNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRG 765



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 163/597 (27%), Positives = 271/597 (45%), Gaps = 50/597 (8%)

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
           L+ ++  Y K G    A  +  +M   GL P     N L+  L  A +ME   +    M 
Sbjct: 178 LDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFME 237

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
             G+ PD  TYS   +          A KV +++  +    + VTY V+I G C+ G VE
Sbjct: 238 GAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVE 297

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
           E    +E M+  G   +   Y  L++ +CK GR+ EA  LL EM   GLKP++V Y+ L+
Sbjct: 298 EAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLV 357

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
            G  K+ K  +A  + NEM S  + PN   +  ++ GLC+   +  A    + +I     
Sbjct: 358 DGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHR 417

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            D   Y+ ++ G+ +  +   A +L  ++    I P+  T+  +I G C+NG+  +A  L
Sbjct: 418 PDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNL 477

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L+ +   GL+P+A  Y   +  + +EG+I      L+ M    + P    Y  +IKGL  
Sbjct: 478 LEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLST 537

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             +++EA +    +   G+ PD+ TY+ +I  +CK ++L KA QLL QM    L+P + T
Sbjct: 538 VGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADT 597

Query: 521 YNILIDGLCVNGDLKNADCLLVSL-------QEH-------NIS-----------LTKVA 555
           Y  L++G   + D +    +L S+         H       N+S           LT+V 
Sbjct: 598 YTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVE 657

Query: 556 ----------YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------------- 592
                     Y+++I   C   D+ KA+    +M ++G E  I  Y              
Sbjct: 658 KNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDIS 717

Query: 593 --KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             ++ F  +L+ G  P+      ++    + GD+   F+L   M+  G+ PD F+ N
Sbjct: 718 RARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYN 774



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 160/607 (26%), Positives = 276/607 (45%), Gaps = 76/607 (12%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLY----DDIKVSETPRNVYTNSIVIDGL 73
           V  +M+  D  ++  TYN ++  L  +  + + +    + +    +P + +T   +++GL
Sbjct: 267 VFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSP-DAFTYGALMNGL 325

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           C+  RL++A   L E +     P+VV    ++  + K G A  A  +   M+  G+ P+ 
Sbjct: 326 CKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNK 385

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
             Y+ LI GLC  G +  A +  N+M + G  PD  TY  L +G        GA++++ +
Sbjct: 386 IMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNE 445

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL-------- 245
           +   G  P+  TY ++I G CQ G  +E   L E M+S+G K N   Y+ L+        
Sbjct: 446 MRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGH 505

Query: 246 -SSMCKS--------------------------GRIDEALGLLYEMEAVGLKPDLVTYSI 278
            S  C+S                          GRI+EA     +++  GL PD  TYS 
Sbjct: 506 ISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSG 565

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNS------------------------------ 308
           LI G CK   + KA QL  +M +  + PN+                              
Sbjct: 566 LIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSG 625

Query: 309 -----FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
                  +G ++  L   E +  A M    +  +  + D+ +Y+ +I G  K+ ++ +AV
Sbjct: 626 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAV 685

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L  ++ ++ + P IV +N+LI GFC++G ++ AR + D+I   GL P+ VTYT  ++  
Sbjct: 686 GLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGN 745

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ G+I     L ++M  + I P    Y V+  G      L++A+ L E+M+  G     
Sbjct: 746 CKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVS 805

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           + ++T++R FCK   L++  +LL+ M    + P + T   +I      G L  A  +   
Sbjct: 806 L-FSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAE 864

Query: 544 LQEHNIS 550
           LQ+   S
Sbjct: 865 LQQKKAS 871



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 141/307 (45%), Gaps = 6/307 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y +T  +  A  ++ +M    LK +  TY  LL        H  +   L   +   + P 
Sbjct: 570 YCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPD 629

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N +   IVI  L +   ++ A + L E       P +   ++++S  CK+   E A GL 
Sbjct: 630 N-HIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLL 688

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M K GL P    YN LI G C +G +  A    + +   G+ P+ +TY+ L  G    
Sbjct: 689 DEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKN 748

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             I+ A+ + + +L +G  PD   Y VL  G     ++E+ L L E M ++G+  +V  +
Sbjct: 749 GDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLF 807

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S L+   CK GR+ E   LL+ M    + P+  T   +I    K  K+ +A +++ E+  
Sbjct: 808 STLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQ 867

Query: 302 KRISPNS 308
           K+ S +S
Sbjct: 868 KKASQSS 874


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 175/559 (31%), Positives = 286/559 (51%), Gaps = 38/559 (6%)

Query: 29  VSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILF 85
           VSI   NSLL  L      D+ W++Y++I  S    NVYT +I+++ LC+  ++ D   F
Sbjct: 148 VSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPF 207

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
           L +                                   M + G+  D  +YN LI+  C 
Sbjct: 208 LID-----------------------------------MEQKGIFADIVTYNTLINAYCR 232

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
            G + EA E  N M   G++P   TY+ +  G     +   A  V  ++L  G  PD  T
Sbjct: 233 EGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTT 292

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y  L+   C+  N  E   +   ML +G   ++I++S L+    ++G +D+AL    +M+
Sbjct: 293 YNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMK 352

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             GL PD V Y+ILI G C+   + +A+++ ++M  +  + +  A+  IL GLC+K+++ 
Sbjct: 353 TSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLA 412

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +A   FD ++    + D   +  +I G+ K GN+G+A+ L+  + +K I P IVT+N LI
Sbjct: 413 DANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILI 472

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            GFCK  ++  A  L + +    + P+ ++Y   +N YC  G +     L  EM  K I 
Sbjct: 473 DGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIK 532

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           PT VT   VIKG C+   L +A + L  M   GV PD ITYNT+I  F K + + KAF L
Sbjct: 533 PTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFL 592

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           +N+M    L+P   TYN++++G C  G ++ A+ +L  + E  I   +  YTT+I  + +
Sbjct: 593 INKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVS 652

Query: 566 EGDVHKAMTFFCQMVEKGF 584
           + ++ +A  F  +M+++GF
Sbjct: 653 QDNLKEAFRFHDEMLQRGF 671



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/537 (27%), Positives = 266/537 (49%), Gaps = 15/537 (2%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F ++ + G      + N L+ GL   G ++ A E  N++ R G+E +  T +I+      
Sbjct: 138 FKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCK 197

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +I      +  +  KG   DIVTY  LI  YC+ G + E  ++   M  +G K  +  
Sbjct: 198 DHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFT 257

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ +++ +CK GR   A G+  EM ++GL PD  TY+ L+   C+ +   +A  ++++M 
Sbjct: 258 YNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDML 317

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            + +SP+  +  +++        + +A MYF  +  S  + D V+Y I+I+GY + G + 
Sbjct: 318 HRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMS 377

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+++  +++E+  +  +V +N+++ G CK   +ADA  L D +   G+ P   T+TT +
Sbjct: 378 EALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLI 437

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + +C+EGN+ + L+L   M  K I P  VTY ++I G CK  ++++A +L  +M    + 
Sbjct: 438 HGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIF 497

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ I+Y  ++  +C    + +AF+L ++M    ++PT  T N +I G C +GDL  AD  
Sbjct: 498 PNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEF 557

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM 598
           L  +    +    + Y T+I        + KA     +M  KG +  +  Y    + FC 
Sbjct: 558 LGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCR 617

Query: 599 -------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                        M+  G  PD+     ++  +    +L   F     M++ G +PD
Sbjct: 618 QGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 235/477 (49%), Gaps = 32/477 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y R G++ +A  V+  M    LK ++ TYN+                             
Sbjct: 230 YCREGLLGEAFEVMNSMSGKGLKPTLFTYNA----------------------------- 260

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
              VI+GLC++ R   A     E       P   + N ++   C+      AK +F  ML
Sbjct: 261 ---VINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDML 317

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G+ PD  S++ LI      G +++AL +  DM   G+ PD + Y+IL  G+     +S
Sbjct: 318 HRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMS 377

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A ++  K+L +G   D+V Y  ++ G C+   + +   L + M+ +G   +   ++ L+
Sbjct: 378 EALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLI 437

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              CK G + +AL L   M    +KPD+VTY+ILI G CK  ++ KA +L+NEM S++I 
Sbjct: 438 HGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIF 497

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN  ++  ++ G C    ++EA   +D +I       +V  N +I GY + G++ +A + 
Sbjct: 498 PNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEF 557

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++I + + P  +T+N+LI GF K   +  A  L++ ++  GL+P  VTY   +N +C 
Sbjct: 558 LGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCR 617

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +G +Q    +L++M  + I P   TYT +I G   Q  L+EA +  ++M   G  PD
Sbjct: 618 QGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 234/491 (47%), Gaps = 15/491 (3%)

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           D + + +L + +    +++      + L  KG    I     L+ G  ++G V+   ++ 
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
             +   G +LNV   +++++++CK  +ID+    L +ME  G+  D+VTY+ LI   C++
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
             + +A ++ N M  K + P  F + A++ GLC+K     A+  F+ ++      D   Y
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N ++    +  N  EA  ++  ++ + +SP +++F+SLI    +NG +  A      +K 
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKT 353

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            GL P  V YT  +N YC  G +   L +  +M  +      V Y  ++ GLCK+  L +
Sbjct: 354 SGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLAD 413

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A  L ++M   GV PD  T+ T+I   CK  ++ KA  L   M   N++P   TYNILID
Sbjct: 414 ANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILID 473

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           G C   +++ A+ L   +    I    ++Y  ++  +C  G V +A   + +M+ KG + 
Sbjct: 474 GFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKP 533

Query: 587 S-------IRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           +       I+ Y +S        F   M+S G  PD      ++  F +G  +   F L 
Sbjct: 534 TLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLI 593

Query: 632 AVMIKSGLLPD 642
             M   GL PD
Sbjct: 594 NKMETKGLQPD 604


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 176/587 (29%), Positives = 307/587 (52%), Gaps = 47/587 (8%)

Query: 94  FGPSVVSLNAIMSRYCKLGFAEV-AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           F P V+S NAI+    +     + A+ ++  M+  G+  + FSYNILI G C AG++E  
Sbjct: 163 FMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMG 222

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           L F  +M R+   P+ +TY+ +   +  L +I  A+K+++ + ++G +P+++TY ++I G
Sbjct: 223 LRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVING 282

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            C++G +EE   +   M  +GF  + + Y+ L++  CK G   +AL L  EM   GL PD
Sbjct: 283 LCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPD 342

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY+ LI  +CK   +++A++ +++M  + + PN   + +++ G  +K  + EA   +D
Sbjct: 343 VVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWD 402

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +I S     +V YN +++G+   G + EA+ L R +  K +SP +V+++++I GFC+  
Sbjct: 403 EMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQ 462

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           ++  A ++   +   G+ P A+TY++ +   CE+  +     L QEM  K++ P   TYT
Sbjct: 463 ELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYT 522

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I G CK+  L EA+ L ++M   G  PD +TYN +I    K    R+A +LL +++  
Sbjct: 523 SLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYD 582

Query: 513 NLEPTSATYNILID---------------GLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
              P   TY+ LI+               G C+ G +  AD +  S+ + N    +  Y 
Sbjct: 583 ESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYN 642

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGF-----------------------EISIRDYTKS 594
            II  HC +G+VHKA   + +MV+ GF                        + IRD  +S
Sbjct: 643 VIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRS 702

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
             C +       D E+ + ++   H+ G++ +VF L   M K G LP
Sbjct: 703 --CKL------SDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLP 741



 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 153/539 (28%), Positives = 278/539 (51%), Gaps = 28/539 (5%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
            +++++ +    NV T + VI   C+  R+ +A   L+    +   P++++ N +++  C
Sbjct: 225 FFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLC 284

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           ++G  E   G+   M + G  PD  +YN L++G C  G+  +AL   ++M R+G+ PD +
Sbjct: 285 RVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVV 344

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           TY+ L         ++ A +   ++ ++G  P+ VTYT LI G+ Q G ++E  ++ + M
Sbjct: 345 TYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEM 404

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           +  GF   ++ Y+ LL+  C SGR++EA+GLL  ME  GL PD+V+YS +I G C+  ++
Sbjct: 405 IRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQEL 464

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A Q+  EM  K +SP++  + +++ GLCE+  + EA   F  ++  + + D   Y  +
Sbjct: 465 DRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSL 524

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           I+GY K G++ EA+ L+ ++I+K   P  VT+N LI G  K  +  +A+RLL  +     
Sbjct: 525 INGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDES 584

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P+ +TY T + + C +   + ++AL                   IKG C +  + EA Q
Sbjct: 585 IPNGITYDTLIES-CSDIEFKSVVAL-------------------IKGFCMKGLMNEADQ 624

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           + E M      P++  YN II   C+  ++ KA +L  +M      P + T   L+  L 
Sbjct: 625 VFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALY 684

Query: 530 VNGDLKNADC----LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             G  +  +     +L S +  +  L+K     +++ +  EG++        +M + GF
Sbjct: 685 SEGMDEQLNLVIRDILRSCKLSDAELSKA----LVQINHKEGNIDAVFNLLTEMAKDGF 739



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 258/509 (50%), Gaps = 18/509 (3%)

Query: 30  SIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           ++ TYN+++     L+  D  + L   + +     N+ T ++VI+GLC+  R+++    L
Sbjct: 237 NVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVL 296

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            E   K F P  V+ N +++ YCK+G    A  L   ML+ GL PD  +Y  LI+ +C A
Sbjct: 297 AEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKA 356

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G++  A+EF + M   G+ P+ +TY+ L  GF     +  A+++  +++  G  P IVTY
Sbjct: 357 GNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTY 416

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             L+ G+C  G +EE + L   M  +G   +V++YS +++  C+   +D A  +  EM  
Sbjct: 417 NALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVE 476

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G+ PD +TYS LI+GLC+Q ++++A  L+ EM +K + P+ F + +++ G C++  + E
Sbjct: 477 KGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNE 536

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS--- 383
           A    D +I    + D V YN++I+G  K     EA +L  +L      P+ +T+++   
Sbjct: 537 ALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIE 596

Query: 384 ------------LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
                       LI GFC  G + +A ++ +++     +P+   Y   ++ +C +GN+ +
Sbjct: 597 SCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHK 656

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              L +EM      P  VT   ++K L  +   ++   ++ D+       D      +++
Sbjct: 657 AHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQ 716

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
              K  ++   F LL +M      P+ A 
Sbjct: 717 INHKEGNIDAVFNLLTEMAKDGFLPSGAA 745



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 207/410 (50%), Gaps = 16/410 (3%)

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCK-QDKVHKAIQLYNEMCSKRISPNSFAHG 312
           I++AL ++   +  G  P +++Y+ ++  + + +  V  A ++Y EM +  +S N F++ 
Sbjct: 148 IEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYN 207

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++ G C    +     +F+ +  + C+ +VV YN +I  Y KL  I EA +L R +  +
Sbjct: 208 ILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLE 267

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            + P+++T+N +I G C+ G++ +   +L  +   G  P  VTY T +N YC+ GN  + 
Sbjct: 268 GLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQA 327

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L L  EM    + P  VTYT +I  +CK   L  A++  + M+V G+ P+ +TY ++I  
Sbjct: 328 LVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLING 387

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
           F +   + +A+++ ++M      PT  TYN L++G CV+G ++ A  LL  ++   +S  
Sbjct: 388 FSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPD 447

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFC 597
            V+Y+TII   C   ++ +A     +MVEKG       Y+                  F 
Sbjct: 448 VVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQ 507

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            ML+    PD+     ++  + + GDL     L   MIK G LPD    N
Sbjct: 508 EMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYN 557



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 215/449 (47%), Gaps = 31/449 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G  H A+ + ++M    L   + TY SL+  +    + +   + +D + V     N
Sbjct: 318 YCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPN 377

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +I+G  Q+  + +A     E     F P++V+ NA+++ +C  G  E A GL  
Sbjct: 378 GVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLR 437

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   GL PD  SY+ +I G C    ++ A +   +M   GV PDAITYS L +G     
Sbjct: 438 GMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQR 497

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +++ A  + Q++L K   PD  TYT LI GYC+ G++ E L L + M+ +GF  + + Y+
Sbjct: 498 RLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYN 557

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           VL++ + K  R  EA  LL ++      P+ +TY  LI                 E CS 
Sbjct: 558 VLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLI-----------------ESCSD 600

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I   S    A++ G C K ++ EA   F+S+I  N   +  +YN++I G+ + GN+ +A
Sbjct: 601 -IEFKSVV--ALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKA 657

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD----ARRLLDTIKLHGLEPSAVTYTT 418
            +LY+++++    P  VT  +L+      G         R +L + KL   E S      
Sbjct: 658 HKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKA---- 713

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            +    +EGNI  +  LL EM      P+
Sbjct: 714 LVQINHKEGNIDAVFNLLTEMAKDGFLPS 742


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 174/586 (29%), Positives = 304/586 (51%), Gaps = 3/586 (0%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVS 57
           +L   Y +TG V +A  V+  M +L L  + +  N LL +L   D M   W L   ++ +
Sbjct: 178 VLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGA 237

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +VYT S  I+  C+      A    +E   ++   + V+ N ++S  C+ G  E A
Sbjct: 238 GILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 297

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
            G    M+ YGL PDAF+Y  L++GLC    ++EA    ++M   G++P+ + Y  L  G
Sbjct: 298 FGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDG 357

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    + + A+ ++++++  G  P+ + Y  LI G C+IG +    KL + M+  G + +
Sbjct: 358 FMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPD 417

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              Y+ L+    +    D A  LL EM   G+ P++ +Y I+I GLC+  +  +A  L  
Sbjct: 418 TFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLE 477

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM S+ + PN+F +  +++G  ++  I+ A    + +  +N   D+  YN +I G   +G
Sbjct: 478 EMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVG 537

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EA + Y Q+ ++ + P   T++ LI+G+CK G +  A +LL  +   GL+P+A TYT
Sbjct: 538 RMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYT 597

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +  Y +  + +++ ++LQ M      P +  Y +VI+ L +   ++ A  +L ++   
Sbjct: 598 DLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKN 657

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD   Y+++I   CK  D+ KA  LL++M    LEP    YN LIDG C +GD+  A
Sbjct: 658 GLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRA 717

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             +  S+    +    V YT +I  +C  GD+  A   + +M+++G
Sbjct: 718 RNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRG 763



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 164/602 (27%), Positives = 270/602 (44%), Gaps = 50/602 (8%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS   L+ ++  Y K G    A  +  +M   GL P     N L+  L  A +ME   + 
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M   G+ PD  TYS   +          A KV +++  +    + VTY V+I G C+
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G VEE    +E M+  G   +   Y  L++ +CK  R+ EA  LL EM   GLKP++V 
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVV 350

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y  L+ G  K+ K  +A  +  EM S  + PN   +  ++ GLC+   +  A      +I
Sbjct: 351 YGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI 410

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D   YN ++ G+ +  +   A +L  ++    I P++ ++  +I G C+NG+  
Sbjct: 411 KVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESK 470

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  LL+ +   GL+P+A  Y   +  + +EGNI      L++M    + P    Y  +I
Sbjct: 471 EAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLI 530

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           KGL    +++EA +    +   G+ PD+ TY+ +I  +CK  +L KA QLL QM    L+
Sbjct: 531 KGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLK 590

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSL-------QEH-------NIS----------- 550
           P + TY  L++G   + D +    +L S+         H       N+S           
Sbjct: 591 PNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMV 650

Query: 551 LTKVA----------YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
           LT+V           Y+++I   C   D+ KA+    +M ++G E  I  Y         
Sbjct: 651 LTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCR 710

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                  ++ F  +L+ G  P+      ++    + GD+   F+L   M+  G+ PD F+
Sbjct: 711 SGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFV 770

Query: 646 IN 647
            N
Sbjct: 771 YN 772



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 153/581 (26%), Positives = 266/581 (45%), Gaps = 39/581 (6%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           R+G V +A     +M +  L     TY +L+  L     + +   L D++  S    N+ 
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
               ++DG  ++ +  +A   L+E       P+ +  + ++   CK+G    A  L   M
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409

Query: 125 LKYGLHPDAFSYN-----------------------------------ILIHGLCIAGSM 149
           +K GL PD F+YN                                   I+I+GLC  G  
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGES 469

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +EA     +M   G++P+A  Y+ L  G      IS A + ++K+      PD+  Y  L
Sbjct: 470 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSL 529

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G   +G +EE  +    +  +G   +   YS L+   CK+G +++A  LL +M   GL
Sbjct: 530 IKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGL 589

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           KP+  TY+ L+ G  K +   K   +   M      P++  +G ++  L   E +  A M
Sbjct: 590 KPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFM 649

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               +  +  + D+ +Y+ +I G  K+ ++ +AV L  ++ ++ + P IV +N+LI GFC
Sbjct: 650 VLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFC 709

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           ++G ++ AR + D+I   GL P+ VTYT  ++  C+ G+I     L +EM  + I P   
Sbjct: 710 RSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAF 769

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            Y V+  G      L++A+ L E+M+  G     + +NT++  FCK   L++  +LL+ M
Sbjct: 770 VYNVLATGCSDAADLEQALFLTEEMFNRGYANVSL-FNTLVHGFCKRGKLQETEKLLHVM 828

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
               + P + T   ++      G L  A  +   LQ+   S
Sbjct: 829 MDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKAS 869



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 137/557 (24%), Positives = 236/557 (42%), Gaps = 88/557 (15%)

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD------PDIVTYTVLICGYCQIGN 218
           +PDA+   +      LLS+ +G WK    L I  SD      PD V+ +++  G     +
Sbjct: 45  DPDAVAAEVAT----LLSRCAGDWK----LAIAASDIPSRLSPDAVS-SLIFGGRSHSLH 95

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
            +  L        +    +  A++ L +S+C +    +A GLL++M      P LV  SI
Sbjct: 96  PKLLLDFFYWSRPRIAPPSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASI 155

Query: 279 -----------------------LIRGLCKQDKVHKAIQLYNEMCSKRISP--------- 306
                                  L+    K   V  A Q+   M    ++P         
Sbjct: 156 QRAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLL 215

Query: 307 ---------------NSFAHGAILL-----------GLCEKEMITEARMYFDSLIMSNCI 340
                            F  GA +L             C+      A+  F+ +   +C 
Sbjct: 216 KDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCA 275

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            + V YN+MI G  + G + EA     ++++  +SP   T+ +L+ G CK  ++ +A+ L
Sbjct: 276 MNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKAL 335

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           LD +   GL+P+ V Y T ++ + +EG       +L+EM +  + P  + Y  +I+GLCK
Sbjct: 336 LDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCK 395

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             +L  A +LL++M  +G+ PD  TYN +++   +  D   AF+LLN+M    + P   +
Sbjct: 396 IGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYS 455

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y I+I+GLC NG+ K A  LL  +    +      Y  +I  H  EG++  A     +M 
Sbjct: 456 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMT 515

Query: 581 E--------------KGFEISIR-DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
           +              KG     R +  + ++  +   G  PD+     ++  + + G+L 
Sbjct: 516 KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLE 575

Query: 626 SVFELAAVMIKSGLLPD 642
              +L   M+ SGL P+
Sbjct: 576 KADQLLRQMLNSGLKPN 592



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 210/500 (42%), Gaps = 58/500 (11%)

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           +   P      VL+  Y + G+V    ++  +M   G        + LL  + ++    +
Sbjct: 167 RSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRA----D 222

Query: 257 ALGLLYE----MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           A+ LL++    ME  G+ PD+ TYS  I   CK      A +++ EM  +  + N   + 
Sbjct: 223 AMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYN 282

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++ GLC    + EA  + + ++      D   Y  +++G  K   + EA  L  ++   
Sbjct: 283 VMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCS 342

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR- 431
            + P+IV + +L+ GF K GK A+A  +L  +   G++P+ + Y   +   C+ G + R 
Sbjct: 343 GLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRA 402

Query: 432 ----------------------------------LLALLQEMETKAIGPTHVTYTVVIKG 457
                                                LL EM    I P   +Y ++I G
Sbjct: 403 SKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMING 462

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LC+  + +EA  LLE+M   G+ P+   Y  +I    K  ++  A + L +M   N+ P 
Sbjct: 463 LCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPD 522

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
              YN LI GL   G ++ A+     +Q+  +   +  Y+ +I  +C  G++ KA     
Sbjct: 523 LFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLR 582

Query: 578 QMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           QM+  G + +   YT                S    ML +G  PD  I  +++    +  
Sbjct: 583 QMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSE 642

Query: 623 DLGSVFELAAVMIKSGLLPD 642
           ++   F +   + K+GL+PD
Sbjct: 643 NMEVAFMVLTEVEKNGLVPD 662



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 154/381 (40%), Gaps = 37/381 (9%)

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQL-YNEMCSKRISPNSF-AHGAILLGLCEKEMITE 326
           L PD V+ S++  G  +   +H  + L +      RI+P S  A   +   LC   +  +
Sbjct: 77  LSPDAVS-SLIFGG--RSHSLHPKLLLDFFYWSRPRIAPPSADAFARLAASLCAASLFPQ 133

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A      +I+++    +VL +I             A+Q       +  SPS    + L+ 
Sbjct: 134 ANGLLHQMILAHPHPPLVLASIQ-----------RAIQDTDHR-SRSPSPSTAVLDVLVD 181

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
            + K G V +A +++  +   GL P+       +        ++ L  L   ME   I P
Sbjct: 182 TYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILP 241

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              TY+  I+  CK      A ++ E+M       +++TYN +I   C+   + +AF   
Sbjct: 242 DVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK 301

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +M  + L P + TY  L++GLC    LK A  LL  +    +    V Y T++     E
Sbjct: 302 EEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKE 361

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
           G   +A     +M+  G +                    P++ + + ++    + G LG 
Sbjct: 362 GKTAEAFDILKEMISAGVQ--------------------PNKIMYDNLIRGLCKIGQLGR 401

Query: 627 VFELAAVMIKSGLLPDKFLIN 647
             +L   MIK GL PD F  N
Sbjct: 402 ASKLLKEMIKVGLRPDTFTYN 422


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 175/562 (31%), Positives = 293/562 (52%), Gaps = 40/562 (7%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RH-------------------- 43
            + + G V DA+ +   M++L +  ++ TYN+L++ L +H                    
Sbjct: 255 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 314

Query: 44  TDIMWD------------------LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILF 85
           T I +                   L + ++   TP  V  N++ IDG C+   L DA+  
Sbjct: 315 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTL-IDGYCKMGNLGDALRI 373

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
             +   K   P+ V+LN+I+  +CK+G  E A+ +   ML  G   +  ++  +IH LC+
Sbjct: 374 RGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCM 433

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
               E AL F  +M    + P+    + L  G     + S A ++  +LL KG   ++VT
Sbjct: 434 NSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVT 493

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
              LI G C+ GN++E ++L + ML +GF L+ I Y+ L+S  CK G+++E   L  EM 
Sbjct: 494 TNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMV 553

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G++PD  TY++LI G+C+  K+ +A+ L+NE  S+ + PN + +G ++ G C+ + I 
Sbjct: 554 KQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIE 613

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           E    F  L+  N   + V+YN +I  Y + GN  EA +L+  +  K I P+  T++SLI
Sbjct: 614 EGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLI 673

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
           +G C  G++ DA+ L+D ++  GL P+ V YT  +  YC+ G + +++ +LQEM +  I 
Sbjct: 674 HGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH 733

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  +TYTV+I G  K   ++ A +LL +M   G+ PD +TYN +   FCK   + + F++
Sbjct: 734 PNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKI 793

Query: 506 LNQMWLHNLEPTSATYNILIDG 527
            + M    L     TY  L+ G
Sbjct: 794 CDYMSQEGLPLDEITYTTLVHG 815



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 169/585 (28%), Positives = 304/585 (51%), Gaps = 21/585 (3%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + ++  L + + L+ +  ++ ET  +   P V   +  ++ +CK G  E A  LF 
Sbjct: 212 VKTCTFLLSSLVKANELEKS-YWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFF 270

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K G+ P+  +YN LIHGLC  G+++EA  F   M + GV    ITYS+L  G   L 
Sbjct: 271 DMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLE 330

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           + + A  V+++ L KG  P+ V Y  LI GYC++GN+ + L++R  M+S+G   N +  +
Sbjct: 331 KFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLN 390

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++   CK G++++A  +L EM + G   +   ++ +I  LC   +   A++   EM  +
Sbjct: 391 SIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR 450

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN      ++ GLC++   ++A   +  L+      ++V  N +I G  K GN+ EA
Sbjct: 451 NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEA 510

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           V+L ++++E+      +T+N+LI G CK GKV +  +L   +   G+EP   TY   ++ 
Sbjct: 511 VRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHG 570

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C  G +   + L  E +++ + P   TY V+I G CK  K++E  +L  ++    +  +
Sbjct: 571 MCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 630

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            + YNT+IR++C+  +  +AF+L + M    + PT+ATY+ LI G+C  G +++A CL+ 
Sbjct: 631 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 690

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
            +++  +    V YT +I  +C  G + K +    +M    ++I                
Sbjct: 691 EMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM--SSYDIH--------------- 733

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              P++    VM+  + + GD+ +  +L   M+  G++PD    N
Sbjct: 734 ---PNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYN 775



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 162/321 (50%), Gaps = 3/321 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           +TG + +AV ++ KM E    +   TYN+L+         +  + L  ++       + +
Sbjct: 503 KTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 562

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +++I G+C+  +L +A+    E   ++  P+V +   ++  YCK    E  + LF  +
Sbjct: 563 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 622

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L   L  ++  YN LI   C  G+  EA +  +DM   G+ P   TYS L  G   + ++
Sbjct: 623 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 682

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +I ++  +G  P++V YT LI GYC++G +++ + + + M S     N I Y+V+
Sbjct: 683 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 742

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +    KSG +  A  LL+EM   G+ PD VTY++L  G CK+ K+ +  ++ + M  + +
Sbjct: 743 IDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGL 802

Query: 305 SPNSFAHGAILLGLCEKEMIT 325
             +   +  ++ G  +   +T
Sbjct: 803 PLDEITYTTLVHGWQQPSALT 823


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  301 bits (771), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 178/627 (28%), Positives = 314/627 (50%), Gaps = 23/627 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVS 57
           +L   Y ++G V DA  V+  M++  L  SI+  N+LL +L   D M   W + + +  +
Sbjct: 52  VLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 111

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +VYT S +I+  C+      A   L E   +  G + V+ N +++  C+ G  E A
Sbjct: 112 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 171

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
            G    M  YGL PD F+Y  LI+GLC +    EA    ++M    ++P+ + Y+ L  G
Sbjct: 172 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 231

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F        A+K+I++++  G  P+ +TY  L+ G C++G ++    L + M+    + +
Sbjct: 232 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 291

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            I Y++++    +     +A  LL EME  G+ P++ TYSI+I GLC+  +  KA  L  
Sbjct: 292 TITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 351

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM +K + PN+F +  ++ G C +  ++ A   FD +   N + D+  YN +I G  K+G
Sbjct: 352 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 411

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + E+ + + Q+ E+ + P+  T++ LI+G+ KNG +  A +L+  +   GL+P+ V Y 
Sbjct: 412 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 471

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             + +Y +  +I+++ +  + M  + +   +  Y ++I  L     ++ A ++L ++   
Sbjct: 472 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKN 531

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G  PD   Y+++I   CK  D  KAF +L++M    ++P    YN LIDGLC +GD+  A
Sbjct: 532 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 591

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             +  S+    +    V YT++I   C  GD+  A   + +                   
Sbjct: 592 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNE------------------- 632

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDL 624
            ML+ G  PD  +  V+       GDL
Sbjct: 633 -MLATGITPDAFVYSVLTTGCSSAGDL 658



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 161/601 (26%), Positives = 281/601 (46%), Gaps = 54/601 (8%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+V  L+ ++  Y K G  + A  +  +M   GL P     N L+  L  A +M    + 
Sbjct: 47  PAV--LDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKV 104

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M   G+ PD  TYS L + +  + +   A KV+ ++  +G   + VTY VLI G C+
Sbjct: 105 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 164

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G VEE    ++ M   G   +   Y  L++ +CKS R +EA  LL EM    LKP++V 
Sbjct: 165 SGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVV 224

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G  ++    +A ++  EM +  + PN   +  ++ GLC+   +  A +    ++
Sbjct: 225 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 284

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
             +   D + YN++I+G+ +  N  +A +L  ++    ISP++ T++ +I+G C++G+  
Sbjct: 285 RDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPE 344

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  LL+ +   GL+P+A  Y   ++ YC EGN+     +  +M    + P    Y  +I
Sbjct: 345 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 404

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GL K  +++E+ +    M   G+ P++ TY+ +I  + K  DL  A QL+ +M    L+
Sbjct: 405 FGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLK 464

Query: 516 PT--------------------SAT---------------YNILIDGLCVNGDLKNADCL 540
           P                     S+T               Y ILI  L  +G+++ A  +
Sbjct: 465 PNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRV 524

Query: 541 LVSLQEHNISLTKV-AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR---------- 589
           L  + E N S+  V  Y+++I   C   D  KA     +M +KG + +I           
Sbjct: 525 LSEI-EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 583

Query: 590 -----DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                 Y ++ F  +L+ G  P+      ++    + GD+ + F L   M+ +G+ PD F
Sbjct: 584 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 643

Query: 645 L 645
           +
Sbjct: 644 V 644



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 157/631 (24%), Positives = 287/631 (45%), Gaps = 6/631 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R+G V +A      M++  L     TY +L+  L   R ++    L D++  +E   NV 
Sbjct: 164 RSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV 223

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             + +IDG  ++    +A   ++E       P+ ++ + ++   CK+G  + A  L   M
Sbjct: 224 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 283

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++    PD  +YN++I G     + ++A    ++M   G+ P+  TYSI+  G     + 
Sbjct: 284 VRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEP 343

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +++++  KG  P+   Y  LI GYC+ GNV    ++ + M       ++  Y+ L
Sbjct: 344 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 403

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  + K GR++E+     +M+  GL P+  TYS LI G  K   +  A QL   M    +
Sbjct: 404 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 463

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   +  +L    + + I +    F S++    + D  +Y I+I      GN+  A +
Sbjct: 464 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 523

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +  ++ +    P +  ++SLI G CK      A  +LD +   G++P+ V Y   ++  C
Sbjct: 524 VLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 583

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G+I     +   +  K + P  VTYT +I G CK   +  A  L  +M   G+TPD  
Sbjct: 584 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 643

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y+ +        DL +A  L+ +M+L     + +++N L+DG C  G ++    LL  +
Sbjct: 644 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVI 702

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
               +    +    II      G + +  T F ++ +K  E + R ++  F  M+     
Sbjct: 703 MGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKI 762

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
           P D  + + M+    + G+L     L  V++
Sbjct: 763 PLD--VVDDMIRDHCKEGNLDKALMLRDVIV 791



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 163/571 (28%), Positives = 272/571 (47%), Gaps = 25/571 (4%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY-NLRHTDI--MWDLYDDIKVSETPRNVY 64
           + G +  A  ++ +M     +    TYN ++  + RH +    + L  +++ +    NVY
Sbjct: 269 KMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVY 328

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T SI+I GLCQ    + A   L+E   K   P+      ++S YC+ G   +A  +F  M
Sbjct: 329 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 388

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K  + PD + YN LI GL   G +EE+ ++   M   G+ P+  TYS L  G+     +
Sbjct: 389 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDL 448

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +++Q++L  G  P+ V Y  L+  Y +  ++E+     + ML QG  L+   Y +L
Sbjct: 449 ESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGIL 508

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           + ++  SG ++ A  +L E+E  G  PD+  YS LI GLCK     KA  + +EM  K +
Sbjct: 509 IHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGV 568

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   + A++ GLC+   I+ AR  F+S++    + + V Y  +IDG  K+G+I  A  
Sbjct: 569 DPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFY 628

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           LY +++   I+P    ++ L  G    G +  A  L++ + L G   S  ++   ++ +C
Sbjct: 629 LYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFC 687

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA----------------- 467
           + G +Q  L LL  +  + + P  +T   +I GL +  KL E                  
Sbjct: 688 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAAR 747

Query: 468 --VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
               L  DM   G  P  +  + +IR  CK  +L KA  L + +   +     ++Y  ++
Sbjct: 748 HFSSLFMDMINQGKIPLDVV-DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIV 806

Query: 526 DGLCVNGDLKNADCLLVSLQEH-NISLTKVA 555
           D LC  G L  A  LL  + +  N+  T VA
Sbjct: 807 DNLCRKGKLSEALNLLKEMDKRGNLQPTLVA 837



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 151/600 (25%), Positives = 281/600 (46%), Gaps = 22/600 (3%)

Query: 13  HDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVSETPRNVYTNSIV 69
           ++A  ++ +M   +LK ++  Y +L+       + D  + +  ++  +    N  T   +
Sbjct: 204 NEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNL 263

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           + GLC+  ++  A L L++       P  ++ N I+  + +    + A  L   M   G+
Sbjct: 264 VRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGI 323

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P+ ++Y+I+IHGLC +G  E+A +   +M   G++P+A  Y+ L  G+     +S A +
Sbjct: 324 SPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACE 383

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           +  K+      PD+  Y  LI G  ++G VEE  K    M  +G   N   YS L+    
Sbjct: 384 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 443

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K+G ++ A  L+  M   GLKP+ V Y  L+    K D + K    +  M  + +  ++ 
Sbjct: 444 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNR 503

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            +G ++  L     +  A      +  +  + DV +Y+ +I G  K  +  +A  +  ++
Sbjct: 504 IYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 563

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            +K + P+IV +N+LI G CK+G ++ AR + ++I   GL P+ VTYT+ ++  C+ G+I
Sbjct: 564 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 623

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
                L  EM    I P    Y+V+  G      L++A+ L+E+M++ G      ++N +
Sbjct: 624 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNL 682

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           +  FCK   +++  +LL+ +    L P + T   +I GL   G L     + V LQ+   
Sbjct: 683 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTS 742

Query: 550 SLTKVAYTTI------------------IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
                 ++++                  I+ HC EG++ KA+     +V K   +    Y
Sbjct: 743 ESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSY 802



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 116/466 (24%), Positives = 200/466 (42%), Gaps = 56/466 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y R G V  A  +  KM ++++   +  YNSL++ L     + +    +  ++      N
Sbjct: 372 YCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 431

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T S +I G  +   L+ A   +Q        P+ V    ++  Y K    E     F 
Sbjct: 432 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 491

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML  G+  D   Y ILIH L  +G+ME A    +++ ++G  PD   YS L  G    +
Sbjct: 492 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTA 551

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               A+ ++ ++  KG DP+IV Y  LI G C+ G++     +   +L++G   N + Y+
Sbjct: 552 DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYT 611

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL----------------------- 279
            L+   CK G I  A  L  EM A G+ PD   YS+L                       
Sbjct: 612 SLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR 671

Query: 280 -----------IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE-- 326
                      + G CK+ K+ + ++L + +  + + PN+     I+ GL E   ++E  
Sbjct: 672 GHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 731

Query: 327 -------------ARMYFDSLIMSNCIQDVVLYNI---MIDGYVKLGNIGEAVQLYRQLI 370
                        A  +F SL M    Q  +  ++   MI  + K GN+ +A+ L   ++
Sbjct: 732 TIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIV 791

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-LEPSAVT 415
            K       ++ +++   C+ GK+++A  LL  +   G L+P+ V 
Sbjct: 792 AKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVA 837



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/232 (20%), Positives = 99/232 (42%), Gaps = 20/232 (8%)

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           S       ++ Y + G +Q    ++  M  + + P+      ++K L +   +    ++ 
Sbjct: 46  SPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVR 105

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
           E M   G++PD  TY+T+I ++CK ++   A ++L +M        + TYN+LI GLC +
Sbjct: 106 EFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS 165

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           G ++ A      ++++ +      Y  +I   C     ++A     +M            
Sbjct: 166 GAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS----------- 214

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                C  L     P+  +   ++  F + G+    F++   M+ +G+ P+K
Sbjct: 215 -----CAELK----PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNK 257


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  301 bits (771), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 176/560 (31%), Positives = 284/560 (50%), Gaps = 37/560 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+T +I+IDGLC+ S+   A   L E   +   P  V+ N+IM   CK G  E A  L 
Sbjct: 9   DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 68

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M +    P   +YN LI GLC   +++ A    ++    G  PD +TYSILA G    
Sbjct: 69  AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKR 128

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A+++++++   G  P++VTY  LI G C+    E+  +L E ++S GF  +V+ Y
Sbjct: 129 GRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTY 188

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++++  +CK GR+D+AL ++  M   G  P ++TY+ L+ GLC+  +V +A  ++ EM S
Sbjct: 189 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 248

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARM-------------------------------- 329
           K  + ++ A+ +++ G C+     EA+                                 
Sbjct: 249 KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPN 308

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
            F+ +    C+ ++  YNI++DG  K G + EA      +      P +V++N +I G  
Sbjct: 309 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 368

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K  K  +AR++LD +   G+ P AVTY T M  +C+E      + +L+ M    + P +V
Sbjct: 369 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 428

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIG-VTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           TY  +I GL +  +L +A +L+ +M   G V     TYNTII   CK   L++A  L++ 
Sbjct: 429 TYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDH 488

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M  H +E  + TYNI ID LC  G L  A  L   L E +    +V+YTT+I   C    
Sbjct: 489 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSL---LSEMDTLRDEVSYTTVIIGLCKAEQ 545

Query: 569 VHKAMTFFCQMVE-KGFEIS 587
           + +A     +MV  KG  I+
Sbjct: 546 LDRASKLAREMVAVKGLCIT 565



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 174/590 (29%), Positives = 292/590 (49%), Gaps = 11/590 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G    A  ++A M E + + S  TYN+L+  L   ++ D    L D+   S    +V 
Sbjct: 57  KAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVV 116

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T SI+ DGLC++ R+ +A   ++E +G    P++V+ N ++   CK    E A  L   +
Sbjct: 117 TYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETL 176

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G  PD  +Y I++ GLC  G +++AL+    M + G  P  ITY+ L +G     ++
Sbjct: 177 VSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRV 236

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  + ++++ K    D + Y  L+ GYC+    +E  K+ + +    +   +  Y+ L
Sbjct: 237 DEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNAL 293

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   CK GR+DE   +  +M   G  P++ TY+I++ GLCK  KV +A      M S   
Sbjct: 294 MDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGC 353

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+  ++  I+ GL +     EAR   D +I +    D V YN ++  + K     +AV 
Sbjct: 354 VPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVG 413

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA-VTYTTFMNAY 423
           + + +I+  + P  VT+N+LI G  +  ++ DA  L+  +  +G   SA  TY T ++  
Sbjct: 414 ILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRL 473

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+EG +++ L L+  M    +    VTY + I  LCK+ +L EA  LL +M  +    D+
Sbjct: 474 CKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDE 530

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQM-WLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           ++Y T+I   CK + L +A +L  +M  +  L  TS T+N+LID       L  A  LL 
Sbjct: 531 VSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLE 590

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            + +   S + + Y  +I   C    V KA   F +M  +G   S   YT
Sbjct: 591 LMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYT 640



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 251/501 (50%), Gaps = 4/501 (0%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           ++  P V + N ++   CK    + A  +   M+  G+ PD  ++N ++ GLC AG  E 
Sbjct: 4   RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFER 63

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A      M      P   TY+ L  G      +  A  ++ + +  G  PD+VTY++L  
Sbjct: 64  AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILAD 123

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           G C+ G ++E  +L + M   G   N++ Y+ L+  +CK+ + ++A  LL  + + G  P
Sbjct: 124 GLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVP 183

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D+VTY+I++ GLCK+ ++ KA+++   M  +  +P+   + A++ GLC    + EA   F
Sbjct: 184 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 243

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             ++  +C  D + Y  +++GY K     EA ++   +   R +P I  +N+L+ G+CK 
Sbjct: 244 KEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGYCKE 300

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G++ +   + + +   G  P+  TY   M+  C+ G +      L+ M +    P  V+Y
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            ++I GL K  K +EA Q+L+ M   G+ PD +TYNT++  FCK +    A  +L  M  
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 420

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK-VAYTTIIKAHCAEGDVH 570
             ++P + TYN LI GL     L +A  L+  +  +   ++    Y TII   C EG + 
Sbjct: 421 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 480

Query: 571 KAMTFFCQMVEKGFEISIRDY 591
           +A+     M   G E +   Y
Sbjct: 481 QALLLMDHMTGHGVEANTVTY 501



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 226/480 (47%), Gaps = 23/480 (4%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M    V PD  TY+IL  G    S+   A +++ +++ +G  PD VT+  ++ G C+ G 
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
            E    L  VM  +  + +   Y+ L+S +CK   +D A  L+ E  + G  PD+VTYSI
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           L  GLCK+ ++ +A +L  EM     +PN   +  ++ GLC+     +A    ++L+ S 
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
            + DVV Y I++DG  K G + +A+++   ++++  +PS++T+ +L+ G C+ G+V +A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            +   +        A+ Y + +N YC+    +    ++  +      P    Y  ++ G 
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGY 297

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK+ +L E   + EDM   G  P+  TYN ++   CK   + +AF  L  M      P  
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV 357

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            +YNI+IDGL      K A  +L  + +  I    V Y T++   C E     A+     
Sbjct: 358 VSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKN 417

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
           M++ G +                    PD      ++    Q   LG  +EL   M+++G
Sbjct: 418 MIKAGVD--------------------PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 457



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 138/543 (25%), Positives = 245/543 (45%), Gaps = 69/543 (12%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +LA    + G + +A  ++ +M       ++ TYN+L+  L     T+  ++L + +  S
Sbjct: 120 ILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS 179

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +V T +I++DGLC++ RL  A+  ++    +   PSV++  A+M   C+ G  + A
Sbjct: 180 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA 239

Query: 118 KGLFCLMLKYGLHPDAFSY--------------------------------NILIHGLCI 145
             +F  M+      DA +Y                                N L+ G C 
Sbjct: 240 HHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCK 299

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
            G ++E      DM   G  P+  TY+I+  G     ++  A+  ++ +   G  PD+V+
Sbjct: 300 EGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVS 359

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y ++I G  +    +E  ++ + M+  G   + + Y+ L++  CK  R D+A+G+L  M 
Sbjct: 360 YNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMI 419

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR-ISPNSFAHGAILLGLCEKEMI 324
             G+ PD VTY+ LI GL + +++  A +L +EM     +      +  I+  LC++  +
Sbjct: 420 KAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCL 479

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL--IEKRISPSIV--- 379
            +A +  D +       + V YNI ID   K G + EA  L  ++  +   +S + V   
Sbjct: 480 KQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIG 539

Query: 380 ----------------------------TFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
                                       TFN LI  F K  ++ +A  LL+ +   G  P
Sbjct: 540 LCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSP 599

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           S +TY   +   C+   + +   L  EM  + I  + V+YTV+I GLC Q + +EA+Q+L
Sbjct: 600 SVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVL 659

Query: 472 EDM 474
           E+M
Sbjct: 660 EEM 662



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 193/413 (46%), Gaps = 43/413 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RH--TDIMWDLYDDIKVSETPRN 62
           Y + G + +   V   M       +I+TYN ++  L +H   D  +   + +  +    +
Sbjct: 297 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 356

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V + +I+IDGL + S+ ++A   L +       P  V+ N +M+++CK    + A G+  
Sbjct: 357 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 416

Query: 123 LMLKYGLHPDAFSYNILIHGL------------------------------------CIA 146
            M+K G+ PD  +YN LI GL                                    C  
Sbjct: 417 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 476

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G +++AL   + M  HGVE + +TY+I         ++  A  ++ ++    +  D V+Y
Sbjct: 477 GCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSY 533

Query: 207 TVLICGYCQIGNVEEGLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           T +I G C+   ++   KL RE++  +G  +    +++L+ +  K+ R+DEAL LL  M 
Sbjct: 534 TTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMV 593

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G  P ++TY+++I  LCK DKV KA +L++EM  + I  +S ++  ++ GLC +    
Sbjct: 594 QRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGK 653

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           EA    + +  S+C  D +    +       G   EA +L R++  K  S S+
Sbjct: 654 EALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTKMDSLSL 706



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 92/218 (42%), Gaps = 15/218 (6%)

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M  + + P   TY ++I GLCK  K  +A ++L +M   GVTPD +T+N+I+   CK   
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
             +A  LL  M   N  P+  TYN LI GLC   ++  A  L+            V Y+ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNG 603
           +    C  G + +A     +M   G   ++  Y                      ++S+G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           F PD     +++    + G L    ++   M+K G  P
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTP 218


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 194/617 (31%), Positives = 302/617 (48%), Gaps = 31/617 (5%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL------RHTDIMWDLYDD-IKVS 57
            Y ++G  H A  +  KMK L L+ ++ T N+LL +L             + ++D IK+ 
Sbjct: 144 AYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLG 203

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
             P NV T +IVI G C +++ +DA+ FL         P  V+ N I+   CK G    A
Sbjct: 204 IVP-NVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDA 262

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   M   GL P+  +YNIL++G C  G ++EA      M ++ + PD  TY++L  G
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                +I  A+K+  ++      PD+V+Y  LI G  +   + E  KL E M  +G K N
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + +++++   CK G++D+A   + +ME  G  PD VTY+ LI G CK   + +A +  +
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMD 442

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  K +  +S     IL  LC ++ + EA     S        D V Y  +I GY K G
Sbjct: 443 EMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDG 502

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N+  A++L+ ++ EK I PS VT+N +I G C+ GK   A   L+ +   GL P   TY 
Sbjct: 503 NVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYN 562

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T ++ YC EG++++      +M   +  P   T  ++++GLC +  L++A++L       
Sbjct: 563 TILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSK 622

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G   D +TYNT+I S CK   L  AF LL++M    L P   TYN +I  L  +G ++ A
Sbjct: 623 GKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREA 682

Query: 538 DCLLVSLQEHN------ISLTK-----------------VAYTTIIKAHCAEGDVHKAMT 574
           +  +  + E        + L K                 VAY+  IK  C EG    AM 
Sbjct: 683 EEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMR 742

Query: 575 FFCQMVEKGFEISIRDY 591
            F +  +KG  +    Y
Sbjct: 743 IFGESKQKGITVDKSTY 759



 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 178/613 (29%), Positives = 306/613 (49%), Gaps = 24/613 (3%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           SLL     TD   DL+  I    +P     ++  I    Q  +   A    ++       
Sbjct: 109 SLLLGFIATDRRHDLHLSILRLTSPSKALLDT-AIGAYVQSGQPHHAFQIFKKMKRLRLR 167

Query: 96  PSVVSLNAIMS---RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           P++++ N +++   RY        ++  F   +K G+ P+  ++NI+I+G C+    ++A
Sbjct: 168 PNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDA 227

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           +EF N MG++   PD +TY+ +        ++  A  ++  +  +G  P+  TY +L+ G
Sbjct: 228 VEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYG 287

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           YC++G ++E   + E+M       +V  Y++L++ +C  GRI+EA  L  EME + L PD
Sbjct: 288 YCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPD 347

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +V+Y+ LI G  +  K+ +A +L  EM  K + PN+  H  ++   C++  + +A     
Sbjct: 348 VVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +  S    D V YN +I+GY K GN+GEA +   ++  K +    VT N+++   C+  
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           K+ +A +LL + +  G     V+Y T +  Y ++GN+ R L L  EM+ K I P+ VTY 
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I GLC+  K ++A+  L ++   G+ PD+ TYNTI+  +C+  D+ KAFQ  N+M  +
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
           + +P   T NIL+ GLC+ G L+ A  L  +      ++  V Y T+I + C EG +  A
Sbjct: 588 SFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDA 647

Query: 573 MTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
                +M EK                       PD      ++ A    G +    E  +
Sbjct: 648 FNLLSEMEEK--------------------ELGPDHYTYNAIITALTDSGRIREAEEFMS 687

Query: 633 VMIKSGLLPDKFL 645
            M++ G LPD+ L
Sbjct: 688 KMLEKGNLPDQVL 700



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 241/505 (47%), Gaps = 23/505 (4%)

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKG---FHLLSQISGAWKVIQKLLIKGSDPD 202
           +G    A +    M R  + P+ +T + L      +     +S + +     +  G  P+
Sbjct: 148 SGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPN 207

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           + T+ ++I GYC     ++ ++   VM       + + Y+ +L ++CK GR+ +A  LL 
Sbjct: 208 VNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLM 267

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           +M++ GL P+  TY+IL+ G CK   + +A  +   M    + P+ + +  ++ GLC + 
Sbjct: 268 DMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEG 327

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            I EA    D +     + DVV YN +I+G ++   I EA +L  ++ EK + P+ VT N
Sbjct: 328 RIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHN 387

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
            ++  +CK GK+ DA   +  ++  G  P  VTY T +N YC+ GN+      + EM  K
Sbjct: 388 IMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK 447

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            +    VT   +++ LC++ KL+EA +LL      G   D+++Y T+I  + K  ++ +A
Sbjct: 448 NMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRA 507

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            +L ++M    + P++ TYN +I GLC  G  + A   L  L E  +   +  Y TI+  
Sbjct: 508 LKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHG 567

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           +C EGDV KA  F  +MVE                    N F PD   C ++L      G
Sbjct: 568 YCREGDVEKAFQFHNKMVE--------------------NSFKPDVFTCNILLRGLCMEG 607

Query: 623 DLGSVFELAAVMIKSGLLPDKFLIN 647
            L    +L    +  G   D    N
Sbjct: 608 VLEKALKLFNTWVSKGKAIDTVTYN 632



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 247/496 (49%), Gaps = 29/496 (5%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVS 57
           +L + Y + G + +A  VI  M + +L   + TYN L   L N    +  + L D+++  
Sbjct: 283 ILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL 342

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           +   +V + + +I+G  + S++ +A   L+E + K   P+ V+ N ++  YCK G  + A
Sbjct: 343 KLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA 402

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
                 M + G  PD  +YN LI+G C AG+M EA    ++MGR  ++ D++T + + + 
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRT 462

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A+K++     +G   D V+Y  LI GY + GNV+  LKL + M  +    +
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + Y+ ++  +C+ G+ ++A+  L E+   GL PD  TY+ ++ G C++  V KA Q +N
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M      P+ F    +L GLC + ++ +A   F++ +      D V YN +I    K G
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + +A  L  ++ EK + P   T+N++I     +G++ +A                    
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEE------------------ 684

Query: 418 TFMNAYCEEGNIQRLLALLQEMET-------KAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
            FM+   E+GN+   +  L + ET       +    + V Y+  IK LC + K ++A+++
Sbjct: 685 -FMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRI 743

Query: 471 LEDMYVIGVTPDQITY 486
             +    G+T D+ TY
Sbjct: 744 FGESKQKGITVDKSTY 759



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 232/478 (48%), Gaps = 32/478 (6%)

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           +++ + P        I  Y Q G      ++ + M     + N++  + LL+S+    R 
Sbjct: 127 ILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLV---RY 183

Query: 255 DEALGLLYEMEA------VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
             +  + +  EA      +G+ P++ T++I+I G C ++K   A++  N M     SP++
Sbjct: 184 PSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDN 243

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  IL  LC+K  + +AR     +     + +   YNI++ GY K+G + EA  +   
Sbjct: 244 VTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL 303

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + +  + P + T+N LI G C  G++ +A +L D ++   L P  V+Y T +N   E   
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           I     LL+EM  K + P  VT+ +++K  CK+ K+ +A   +  M   G +PD +TYNT
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I  +CK  ++ +AF+ +++M   N++  S T N ++  LC    L+ A  LL S ++  
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM---------- 598
             + +V+Y T+I  +  +G+V +A+  + +M EK     I   T ++ C+          
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK----EIIPSTVTYNCIIGGLCQCGKT 539

Query: 599 ---------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                    +L +G  PD+     +L  + + GD+   F+    M+++   PD F  N
Sbjct: 540 EQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCN 597



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 118/269 (43%), Gaps = 23/269 (8%)

Query: 43  HTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLN 102
           + D    L+D++K  E   +  T + +I GLCQ  + + AI  L E       P   + N
Sbjct: 503 NVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYN 562

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
            I+  YC+ G  E A      M++    PD F+ NIL+ GLC+ G +E+AL+  N     
Sbjct: 563 TILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSK 622

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G   D +TY+ L        ++  A+ ++ ++  K   PD  TY  +I      G + E 
Sbjct: 623 GKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREA 682

Query: 223 LKLREVMLSQG------FKLN-----------------VIAYSVLLSSMCKSGRIDEALG 259
            +    ML +G       +L+                  +AYS  +  +C  G+  +A+ 
Sbjct: 683 EEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMR 742

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           +  E +  G+  D  TY  L+ GL K+ K
Sbjct: 743 IFGESKQKGITVDKSTYINLMDGLIKRRK 771


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 192/617 (31%), Positives = 300/617 (48%), Gaps = 31/617 (5%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL------RHTDIMWDLYDD-IKVS 57
            Y ++G  H A  +  KMK L L+ ++ T N+LL +L             + ++D IK+ 
Sbjct: 144 AYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLG 203

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
             P NV T +IVI G C +++ +DA+ FL         P  V+ N I+   CK G    A
Sbjct: 204 IVP-NVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDA 262

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   M   GL P+  +YNIL++G C  G ++EA      M ++ + PD  TY++L  G
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                +I  A+K+  ++      PD+V+Y  LI G  +   + E  KL E M  +G K N
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + +++++   CK G++D+A   + +ME  G  PD VTY+ LI G CK   + +A +  +
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMD 442

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  K +  +S     IL  LC ++ + EA     S        D V Y  +I GY K G
Sbjct: 443 EMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDG 502

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N+  A++L+ ++ EK I PS VT+N +I G C+ GK   A   L+ +   GL P   TY 
Sbjct: 503 NVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYN 562

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T ++ YC EG++++      +M   +  P   T  ++++GLC +  L++A++L       
Sbjct: 563 TILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSK 622

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G   D +TYNT+I S CK   L  AF LL++M    L P   TYN +I  L  +G ++ A
Sbjct: 623 GKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREA 682

Query: 538 DCLLVSLQEHN-----------------------ISLTKVAYTTIIKAHCAEGDVHKAMT 574
           +  +  + E                            + VAY+  IK  C EG    AM 
Sbjct: 683 EEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMR 742

Query: 575 FFCQMVEKGFEISIRDY 591
            F +  +KG  +    Y
Sbjct: 743 IFGESKQKGITVDKSTY 759



 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 177/613 (28%), Positives = 305/613 (49%), Gaps = 24/613 (3%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           SLL     TD   DL+  I    +P     ++  I    Q  +   A    ++       
Sbjct: 109 SLLLGFIATDRRHDLHLSILRLTSPSKALLDT-AIGAYVQSGQPHHAFQIFKKMKRLRLR 167

Query: 96  PSVVSLNAIMS---RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           P++++ N +++   RY        ++  F   +K G+ P+  ++NI+I+G C+    ++A
Sbjct: 168 PNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDA 227

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           +EF N MG++   PD +TY+ +        ++  A  ++  +  +G  P+  TY +L+ G
Sbjct: 228 VEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYG 287

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           YC++G ++E   + E+M       +V  Y++L++ +C  GRI+EA  L  EME + L PD
Sbjct: 288 YCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPD 347

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +V+Y+ LI G  +  K+ +A +L  EM  K + PN+  H  ++   C++  + +A     
Sbjct: 348 VVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +  S    D V YN +I+GY K GN+GEA +   ++  K +    VT N+++   C+  
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           K+ +A +LL + +  G     V+Y T +  Y ++GN+ R L L  EM+ K I P+ VTY 
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I GLC+  K ++A+  L ++   G+ PD+ TYNTI+  +C+  D+ KAFQ  N+M  +
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
           + +P   T NIL+ GLC+ G L+ A  L  +      ++  V Y T+I + C EG +  A
Sbjct: 588 SFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDA 647

Query: 573 MTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
                +M EK                       PD      ++ A    G +    E  +
Sbjct: 648 FNLLSEMEEK--------------------ELGPDHYTYNAIITALTDSGRIREAEEFMS 687

Query: 633 VMIKSGLLPDKFL 645
            M++ G LP + L
Sbjct: 688 KMLEKGXLPXQVL 700



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 241/505 (47%), Gaps = 23/505 (4%)

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKG---FHLLSQISGAWKVIQKLLIKGSDPD 202
           +G    A +    M R  + P+ +T + L      +     +S + +     +  G  P+
Sbjct: 148 SGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPN 207

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           + T+ ++I GYC     ++ ++   VM       + + Y+ +L ++CK GR+ +A  LL 
Sbjct: 208 VNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLM 267

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           +M++ GL P+  TY+IL+ G CK   + +A  +   M    + P+ + +  ++ GLC + 
Sbjct: 268 DMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEG 327

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            I EA    D +     + DVV YN +I+G ++   I EA +L  ++ EK + P+ VT N
Sbjct: 328 RIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHN 387

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
            ++  +CK GK+ DA   +  ++  G  P  VTY T +N YC+ GN+      + EM  K
Sbjct: 388 IMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK 447

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            +    VT   +++ LC++ KL+EA +LL      G   D+++Y T+I  + K  ++ +A
Sbjct: 448 NMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRA 507

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            +L ++M    + P++ TYN +I GLC  G  + A   L  L E  +   +  Y TI+  
Sbjct: 508 LKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHG 567

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           +C EGDV KA  F  +MVE                    N F PD   C ++L      G
Sbjct: 568 YCREGDVEKAFQFHNKMVE--------------------NSFKPDVFTCNILLRGLCMEG 607

Query: 623 DLGSVFELAAVMIKSGLLPDKFLIN 647
            L    +L    +  G   D    N
Sbjct: 608 MLEKALKLFNTWVSKGKAIDTVTYN 632



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 238/489 (48%), Gaps = 26/489 (5%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVS 57
           +L + Y + G + +A  VI  M + +L   + TYN L   L N    +  + L D+++  
Sbjct: 283 ILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL 342

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           +   +V + + +I+G  + S++ +A   L+E + K   P+ V+ N ++  YCK G  + A
Sbjct: 343 KLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA 402

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
                 M + G  PD  +YN LI+G C AG+M EA    ++MGR  ++ D++T + + + 
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRT 462

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A+K++     +G   D V+Y  LI GY + GNV+  LKL + M  +    +
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + Y+ ++  +C+ G+ ++A+  L E+   GL PD  TY+ ++ G C++  V KA Q +N
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M      P+ F    +L GLC + M+ +A   F++ +      D V YN +I    K G
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS----- 412
            + +A  L  ++ EK + P   T+N++I     +G++ +A   +  +   G  P      
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQL 702

Query: 413 ------------------AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
                             +V Y+ ++   C EG  +  + +  E + K I     TY  +
Sbjct: 703 DXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINL 762

Query: 455 IKGLCKQWK 463
           + GL K+ K
Sbjct: 763 MDGLIKRRK 771



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 232/478 (48%), Gaps = 32/478 (6%)

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           +++ + P        I  Y Q G      ++ + M     + N++  + LL+S+    R 
Sbjct: 127 ILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLV---RY 183

Query: 255 DEALGLLYEMEA------VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
             +  + +  EA      +G+ P++ T++I+I G C ++K   A++  N M     SP++
Sbjct: 184 PSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDN 243

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  IL  LC+K  + +AR     +     + +   YNI++ GY K+G + EA  +   
Sbjct: 244 VTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL 303

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + +  + P + T+N LI G C  G++ +A +L D ++   L P  V+Y T +N   E   
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           I     LL+EM  K + P  VT+ +++K  CK+ K+ +A   +  M   G +PD +TYNT
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I  +CK  ++ +AF+ +++M   N++  S T N ++  LC    L+ A  LL S ++  
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM---------- 598
             + +V+Y T+I  +  +G+V +A+  + +M EK     I   T ++ C+          
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK----EIIPSTVTYNCIIGGLCQCGKT 539

Query: 599 ---------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                    +L +G  PD+     +L  + + GD+   F+    M+++   PD F  N
Sbjct: 540 EQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCN 597


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 177/627 (28%), Positives = 313/627 (49%), Gaps = 23/627 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVS 57
           +L   Y ++G V DA  V+  M++  +  SI+  N+LL +L   D M   W + + +  +
Sbjct: 179 VLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 238

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +VYT S +I+  C+      A   L E   +  G + V+ N +++  C+ G  E A
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 298

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
            G    M  YGL PD F+Y  LI+GLC +    EA    ++M    ++P+ + Y+ L  G
Sbjct: 299 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 358

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F        A+K+I++++  G  P+ +TY  L+ G C++G ++    L + M+    + +
Sbjct: 359 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 418

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            I Y++++    +     +A  LL EME  G+ P++ TYSI+I GLC+  +  KA  L  
Sbjct: 419 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 478

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM +K + PN+F +  ++ G C +  ++ A   FD +   N + D+  YN +I G  K+G
Sbjct: 479 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 538

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + E+ + + Q+ E+ + P+  T++ LI+G+ KNG +  A +L+  +   GL+P+ V Y 
Sbjct: 539 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 598

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             + +Y +  +I+++ +  + M  + +   +  Y ++I  L     ++ A ++L  +   
Sbjct: 599 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKN 658

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G  PD   Y+++I   CK  D  KAF +L++M    ++P    YN LIDGLC +GD+  A
Sbjct: 659 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 718

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             +  S+    +    V YT++I   C  GD+  A   + +                   
Sbjct: 719 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNE------------------- 759

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDL 624
            ML+ G  PD  +  V+       GDL
Sbjct: 760 -MLATGITPDAFVYSVLTTGCSSAGDL 785



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 159/601 (26%), Positives = 281/601 (46%), Gaps = 54/601 (8%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+V  L+ ++  Y K G  + A  +  +M   G+ P     N L+  L  A +M    + 
Sbjct: 174 PAV--LDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKV 231

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M   G+ PD  TYS L + +  + +   A KV+ ++  +G   + VTY VLI G C+
Sbjct: 232 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 291

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G VEE    ++ M   G   +   Y  L++ +CKS R +EA  LL EM    LKP++V 
Sbjct: 292 SGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVV 351

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G  ++    +A ++  EM +  + PN   +  ++ GLC+   +  A +    ++
Sbjct: 352 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 411

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
             +   D + YN++I+G+ +  +  +A +L  ++    ISP++ T++ +I+G C++G+  
Sbjct: 412 RDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPE 471

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  LL+ +   GL+P+A  Y   ++ YC EGN+     +  +M    + P    Y  +I
Sbjct: 472 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 531

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GL K  +++E+ +    M   G+ P++ TY+ +I  + K  DL  A QL+ +M    L+
Sbjct: 532 FGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLK 591

Query: 516 PT--------------------SAT---------------YNILIDGLCVNGDLKNADCL 540
           P                     S+T               Y ILI  L  +G+++ A  +
Sbjct: 592 PNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRV 651

Query: 541 LVSLQEHNISLTKV-AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR---------- 589
           L  + E N S+  V  Y+++I   C   D  KA     +M +KG + +I           
Sbjct: 652 LSGI-EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 710

Query: 590 -----DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                 Y ++ F  +L+ G  P+      ++    + GD+ + F L   M+ +G+ PD F
Sbjct: 711 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 770

Query: 645 L 645
           +
Sbjct: 771 V 771



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 158/631 (25%), Positives = 286/631 (45%), Gaps = 6/631 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R+G V +A      M++  L     TY +L+  L   R ++    L D++  +E   NV 
Sbjct: 291 RSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV 350

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             + +IDG  ++    +A   ++E       P+ ++ + ++   CK+G  + A  L   M
Sbjct: 351 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 410

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++    PD  +YN++I G     S ++A    ++M   G+ P+  TYSI+  G     + 
Sbjct: 411 VRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEP 470

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +++++  KG  P+   Y  LI GYC+ GNV    ++ + M       ++  Y+ L
Sbjct: 471 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 530

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  + K GR++E+     +M+  GL P+  TYS LI G  K   +  A QL   M    +
Sbjct: 531 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 590

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   +  +L    + + I +    F S++    + D  +Y I+I      GN+  A +
Sbjct: 591 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 650

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +   + +    P +  ++SLI G CK      A  +LD +   G++P+ V Y   ++  C
Sbjct: 651 VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 710

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G+I     +   +  K + P  VTYT +I G CK   +  A  L  +M   G+TPD  
Sbjct: 711 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 770

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y+ +        DL +A  L+ +M+L     + +++N L+DG C  G ++    LL  +
Sbjct: 771 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVI 829

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
               +    +    II      G + +  T F ++ +K  E + R ++  F  M+     
Sbjct: 830 MGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKI 889

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
           P D  + + M+    + G+L     L  V++
Sbjct: 890 PLD--VVDDMIRDHCKEGNLDKALMLRDVIV 918



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 158/646 (24%), Positives = 292/646 (45%), Gaps = 37/646 (5%)

Query: 13  HDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVSETPRNVYTNSIV 69
           ++A  ++ +M   +LK ++  Y +L+       + D  + +  ++  +    N  T   +
Sbjct: 331 NEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNL 390

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           + GLC+  ++  A L L++       P  ++ N I+  + +    + A  L   M   G+
Sbjct: 391 VRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGI 450

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P+ ++Y+I+IHGLC +G  E+A +   +M   G++P+A  Y+ L  G+     +S A +
Sbjct: 451 SPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACE 510

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           +  K+      PD+  Y  LI G  ++G VEE  K    M  +G   N   YS L+    
Sbjct: 511 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 570

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K+G ++ A  L+  M   GLKP+ V Y  L+    K D + K    +  M  + +  ++ 
Sbjct: 571 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNR 630

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            +G ++  L     +  A      +  +  + DV +Y+ +I G  K  +  +A  +  ++
Sbjct: 631 IYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 690

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            +K + P+IV +N+LI G CK+G ++ AR + ++I   GL P+ VTYT+ ++  C+ G+I
Sbjct: 691 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 750

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
                L  EM    I P    Y+V+  G      L++A+ L+E+M++ G      ++N +
Sbjct: 751 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNL 809

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           +  FCK   +++  +LL+ +    L P + T   +I GL   G L     + V LQ+   
Sbjct: 810 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTS 869

Query: 550 SLTKVAYTTI------------------IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
                 ++++                  I+ HC EG++ KA+     +V K   +    Y
Sbjct: 870 ESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSY 929

Query: 592 TK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
                            +    M   G  P +  C ++L   H  G
Sbjct: 930 LAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSG 975



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 266/564 (47%), Gaps = 24/564 (4%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY-NLRH--TDIMWDLYDDIKVSETPRNVY 64
           + G +  A  ++ +M     +    TYN ++  + RH      + L  +++ +    NVY
Sbjct: 396 KMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVY 455

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T SI+I GLCQ    + A   L+E   K   P+      ++S YC+ G   +A  +F  M
Sbjct: 456 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 515

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K  + PD + YN LI GL   G +EE+ ++   M   G+ P+  TYS L  G+     +
Sbjct: 516 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDL 575

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +++Q++L  G  P+ V Y  L+  Y +  ++E+     + ML QG  L+   Y +L
Sbjct: 576 ESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGIL 635

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           + ++  SG ++ A  +L  +E  G  PD+  YS LI GLCK     KA  + +EM  K +
Sbjct: 636 IHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGV 695

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   + A++ GLC+   I+ AR  F+S++    + + V Y  +IDG  K+G+I  A  
Sbjct: 696 DPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFY 755

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           LY +++   I+P    ++ L  G    G +  A  L++ + L G   S  ++   ++ +C
Sbjct: 756 LYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFC 814

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA----------------- 467
           + G +Q  L LL  +  + + P  +T   +I GL +  KL E                  
Sbjct: 815 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAAR 874

Query: 468 --VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
               L  DM   G  P  +  + +IR  CK  +L KA  L + +   +     ++Y  ++
Sbjct: 875 HFSSLFMDMINQGKIPLDVV-DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIV 933

Query: 526 DGLCVNGDLKNADCLLVSLQEHNI 549
           D LC  G L  A  LL  + +  I
Sbjct: 934 DNLCRKGKLSEALNLLKEMDKRGI 957



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 201/474 (42%), Gaps = 69/474 (14%)

Query: 240 AYSVLLSSMC-------------------------------------------------- 249
           A++ L  S+C                                                  
Sbjct: 124 AFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDT 183

Query: 250 --KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
             KSGR+ +A  ++  M   G+ P +   + L++ L + D +    ++   M    ISP+
Sbjct: 184 YKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPD 243

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
            + +  ++   C+      A+     +    C  + V YN++I G  + G + EA    +
Sbjct: 244 VYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKK 303

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            + +  + P   T+ +LI G CK+ +  +A+ LLD +    L+P+ V Y   ++ +  EG
Sbjct: 304 DMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREG 363

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           N      +++EM    + P  +TY  +++GLCK  ++  A  LL+ M      PD ITYN
Sbjct: 364 NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 423

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            II    +    + AF+LL++M    + P   TY+I+I GLC +G+ + A  LL  +   
Sbjct: 424 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 483

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG------------FEIS----IRDY 591
            +      Y  +I  +C EG+V  A   F +M +              F +S    + + 
Sbjct: 484 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 543

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           TK +F  M   G  P++     ++  + + GDL S  +L   M+ +GL P+  +
Sbjct: 544 TK-YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 596



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 154/366 (42%), Gaps = 57/366 (15%)

Query: 32  QTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
           + Y  L++NL  +  M   + +   I+ + +  +V+  S +I GLC+ +  + A   L E
Sbjct: 630 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 689

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
            + K   P++V  NA++   CK G    A+ +F  +L  GL P+  +Y  LI G C  G 
Sbjct: 690 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 749

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +  A    N+M   G+ PDA  YS+L  G      +  A  +I+++ ++G    I ++  
Sbjct: 750 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNN 808

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM-------------------- 248
           L+ G+C+ G ++E LKL  V++ +G   N +    ++S +                    
Sbjct: 809 LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKT 868

Query: 249 ---------------------------------CKSGRIDEALGLLYEMEAVGLKPDLVT 275
                                            CK G +D+AL L   + A        +
Sbjct: 869 SESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSS 928

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y  ++  LC++ K+ +A+ L  EM  + I P+      +L  L     I E     D+++
Sbjct: 929 YLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNML 988

Query: 336 MSNCIQ 341
               +Q
Sbjct: 989 CHKWLQ 994



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 152/359 (42%), Gaps = 58/359 (16%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNV 63
           S +G +  A  V++ +++      +  Y+SL+  L  T   +  + + D++       N+
Sbjct: 640 SSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNI 699

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
              + +IDGLC+   +  A         K   P+ V+  +++   CK+G    A  L+  
Sbjct: 700 VCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNE 759

Query: 124 MLKYGLHPDAF----------------------------------SYNILIHGLCIAGSM 149
           ML  G+ PDAF                                  S+N L+ G C  G M
Sbjct: 760 MLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKM 819

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +E L+  + +   G+ P+A+T   +  G     ++S    +  +L  K S+     ++ L
Sbjct: 820 QETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSL 879

Query: 210 ------------------ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
                             I  +C+ GN+++ L LR+V++++   +   +Y  ++ ++C+ 
Sbjct: 880 FMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRK 939

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV--HKAIQLYNEMCSKRISPNS 308
           G++ EAL LL EM+  G+ P      IL+  L     +  H  + L N +C K +  +S
Sbjct: 940 GKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTV-LDNMLCHKWLQKDS 997


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 168/559 (30%), Positives = 298/559 (53%), Gaps = 20/559 (3%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEF-GPSVVSLNAIMSRYCKLGFAEV 116
           E    V T +I+IDG C+ ++L+ A+   ++   +EF  P+  + N +++  CK      
Sbjct: 2   ECQPTVVTWTIIIDGFCKANQLKQALACFEKM--REFVAPNERTYNVVVNGLCKARLTSK 59

Query: 117 AKGLFCLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSIL 174
           A  +   M     + PD  +Y+ +I+G C  G M+ A E   +M  R G+ PD +TY+ +
Sbjct: 60  AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSV 119

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQG 233
             G     ++  A ++++++ +KG +PD  T++ LI G+C    V+E LKL +E++ S  
Sbjct: 120 VDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS 179

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
           +K +V+ Y+ L+   CKSG +++A+ +L  ME     P++VTYS L+ GLCK   + +A+
Sbjct: 180 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 239

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            L+  M SK   PN   +  ++ GLC    +  AR+  D +  + C  D V YN ++DGY
Sbjct: 240 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGY 299

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL-HGLEPS 412
            +LG I EA QL++++  K   P  +T+  L+ GFC   ++ +AR LL+ +K   G++P 
Sbjct: 300 CRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 359

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            VTY+  +  Y            +QEM  + + P  VTY+ +I GLCK  ++  A+++L+
Sbjct: 360 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLK 419

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +M    V P   T+N++I + C+  D+ +A++LL  M  H LEP   TY  L++G    G
Sbjct: 420 NMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 479

Query: 533 DLKNADCLLVSLQEHNIS-------LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            ++ A  L   +++           + + A++ +I+  C   ++ KAM    ++  +  E
Sbjct: 480 RMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECE 539

Query: 586 ISIRDYTKSFFCMMLSNGF 604
            +  D      C+ + +G 
Sbjct: 540 PAEED------CLAIVDGL 552



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 268/532 (50%), Gaps = 48/532 (9%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETA-GKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           N  T ++V++GLC+      A   L+E   GK   P +V+ + +++ +CK G  + A  +
Sbjct: 40  NERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEI 99

Query: 121 FCLML-KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
              M+ + G+ PD  +Y  ++ GLC  G M+ A E   +M   GVEPD  T+S L  G+ 
Sbjct: 100 LREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWC 159

Query: 180 LLSQISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
              ++  A K+ +++L   S  PD+VTYT LI G+C+ GN+E+ +K+  VM  +    NV
Sbjct: 160 NARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNV 219

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + YS LL  +CK+G +D+AL L   M + G  P++VTY+ LI GLC   KV  A  L +E
Sbjct: 220 VTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDE 279

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD---------------- 342
           M +    P++ ++ A+L G C    I EA+  F  +   +C+ D                
Sbjct: 280 MTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASR 339

Query: 343 --------------------VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
                               VV Y+I++ GY +     EA +  +++I + ++P+ VT++
Sbjct: 340 LEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYS 399

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           SLI G CK G+V  A  +L  +    +EPS  T+ + + A C  G++     LL  M   
Sbjct: 400 SLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAH 459

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI--------GVTPDQITYNTIIRSFC 494
            + P  VTYT +++G  +  +++ A +L E M            + P+Q  ++ +IR  C
Sbjct: 460 GLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQ-AFSALIRGLC 518

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           K +++ KA  ++ ++     EP       ++DGL   G  + A  L+ S+ +
Sbjct: 519 KAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISK 570



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 123/284 (43%), Gaps = 48/284 (16%)

Query: 33  TYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE- 88
           +YN+LL     L   +    L+ ++       +  T + ++ G C  SRL++A   L+  
Sbjct: 291 SYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 350

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLG-FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
                  P VV+ + +++ Y +   F E A+     M+   + P+A +Y+ LI GLC AG
Sbjct: 351 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAE-FIQEMIARNVAPNAVTYSSLIDGLCKAG 409

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            ++ A+E   +M    VEP   T++ +      L  +  AWK++  +   G +P +VTYT
Sbjct: 410 RVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT 469

Query: 208 VLICGYCQIGNVEEGLKLREVM----LSQGFKLNVI---AYSVLLSSMCKS--------- 251
            L+ G+ + G +E   +L EVM           N++   A+S L+  +CK+         
Sbjct: 470 TLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAV 529

Query: 252 --------------------------GRIDEALGLLYEMEAVGL 269
                                     GR +EA  L+  +  VGL
Sbjct: 530 VEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 21/165 (12%)

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P  +T+  II  FCK   L++A     +M    + P   TYN++++GLC       A  +
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYEV 63

Query: 541 LVSLQE-HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           L  +++  +++   V Y+T+I   C +G++ +A     +MV +                 
Sbjct: 64  LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTR----------------- 106

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
             +G  PD      ++    + G +    E+   M   G+ PDKF
Sbjct: 107 --DGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKF 149


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  298 bits (762), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 191/683 (27%), Positives = 330/683 (48%), Gaps = 52/683 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R G   +   ++ +M+E     S+ TYN ++  L      D  ++L   +       +V+
Sbjct: 248 RAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVF 307

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T SI+IDG  +Q R  +A L L+E   K   P  V+  A++  + + G +  A  +   M
Sbjct: 308 TYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEM 367

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L  G+  + F+YN L+ G+C  G ME+A    N+M   G++PD  TY+ + +G+      
Sbjct: 368 LARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNT 427

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           S    ++ ++      P   T  ++I G C+ G++E+  ++ E+M+S G K N + Y+ L
Sbjct: 428 SRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTL 487

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +    + GR  EA+ +L  M+  G++PD++ Y+ +I GLCK  K+ +A     EM  + +
Sbjct: 488 IKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGL 547

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN + +GA++ G C+   +  A  YF  ++      + V+   +IDGY K G+  EA  
Sbjct: 548 KPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATS 607

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           ++R ++ + + P + T+++LI+G  +NGK+  A  LL      GL P   TY + ++ +C
Sbjct: 608 IFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFC 667

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           ++G I +   L + M  K I P  +TY  +I GLCK  +++ A +L + +   G+  + +
Sbjct: 668 KQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAV 727

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY----------------------- 521
           TY TII  +CK  +L KAF+L ++M L  + P S  Y                       
Sbjct: 728 TYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLES 787

Query: 522 -----------NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
                      N L+DG C +G +  A+ LL  + + ++    V YT +I  HC  G + 
Sbjct: 788 VQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLK 847

Query: 571 KAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVML 615
           +A  FF  M ++    +   YT                + F  M++    PD     VM+
Sbjct: 848 EAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMI 907

Query: 616 IAFHQGGDLGSVFELAAVMIKSG 638
            A  + GD     +L   M+K G
Sbjct: 908 DAHLKEGDHVKTLKLVDDMLKKG 930



 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 179/616 (29%), Positives = 295/616 (47%), Gaps = 73/616 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G+  +AV      K     V +   N LL +L      ++ W  Y+ +  +    +
Sbjct: 176 YKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHD 235

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT + +I+                                    + + G A+  K L  
Sbjct: 236 VYTYTHLINA-----------------------------------HFRAGNAKEGKRLLF 260

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + G  P   +YN++I GLC AG ++EA E    M + G+  D  TYSIL  GF    
Sbjct: 261 EMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQK 320

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           + + A  +++++  KG  P  V YT LI G+ + G+  E  +++E ML++G KLN+  Y+
Sbjct: 321 RCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYN 380

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +CK G +++A  LL EM  VG+KPD  TY+ +I G  K+    +   L +EM   
Sbjct: 381 ALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKS 440

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P ++  G I+ GLC    I +A   F+ ++      + V+Y  +I G+V+ G   EA
Sbjct: 441 NLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEA 500

Query: 363 VQLYR-----------------------------------QLIEKRISPSIVTFNSLIYG 387
           V++ +                                   ++IE+ + P++ T+ +LI+G
Sbjct: 501 VRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHG 560

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           +CK+G++  A R    +   G+ P+ V  T  ++ YC+EG+     ++ + M  +++ P 
Sbjct: 561 YCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPD 620

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TY+ +I GL +  KLQ A++LL +    G+ PD  TYN+II  FCK   + KAFQL  
Sbjct: 621 VRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHE 680

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M    + P   TYN LI+GLC  G+++ A  L   +    ++   V Y TII  +C  G
Sbjct: 681 YMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSG 740

Query: 568 DVHKAMTFFCQMVEKG 583
           ++ KA   F +M  KG
Sbjct: 741 NLSKAFRLFDEMTLKG 756



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 175/643 (27%), Positives = 306/643 (47%), Gaps = 24/643 (3%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
            + G +  A  ++ +M  + +K   QTYN+++      ++T  + DL  ++K S      Y
Sbjct: 388  KFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAY 447

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T  ++I+GLC+   ++DA    +        P+ V    ++  + + G  + A  +  +M
Sbjct: 448  TCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVM 507

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             K G+ PD   YN +I GLC +  MEEA ++  +M   G++P+  TY  L  G+    ++
Sbjct: 508  DKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEM 567

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
              A +  +++L  G  P+ V  T LI GYC+ G+  E   +   ML +    +V  YS L
Sbjct: 568  QVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSAL 627

Query: 245  LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
            +  + ++G++  A+ LL E    GL PD+ TY+ +I G CKQ  + KA QL+  MC K I
Sbjct: 628  IHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGI 687

Query: 305  SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            SPN   + A++ GLC+   I  AR  FD +       + V Y  +IDGY K GN+ +A +
Sbjct: 688  SPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFR 747

Query: 365  LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
            L+ ++  K + P    +++LI G  K G    A  L       G   S  +    M+ +C
Sbjct: 748  LFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFC 806

Query: 425  EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
            + G +     LL++M  K + P HVTYT++I   CK   L+EA Q   DM    + P+ +
Sbjct: 807  KSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNAL 866

Query: 485  TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            TY  ++  +       + F L ++M   ++EP   T++++ID     GD      L+  +
Sbjct: 867  TYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDM 926

Query: 545  QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
             +   +++K     +I   C +  V + +    ++ E+G  +S+                
Sbjct: 927  LKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSL---------------- 970

Query: 605  PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                  C  ++  FH+ G +     +   M++   +PD   +N
Sbjct: 971  ----ATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELN 1009



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 165/577 (28%), Positives = 272/577 (47%), Gaps = 6/577 (1%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSET----PRNV 63
            R G + DA  V   M  L +K +   Y +L+          +    +KV +     P  +
Sbjct: 458  RHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVL 517

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
              NS++I GLC+  ++++A  +L E   +   P+V +  A++  YCK G  +VA   F  
Sbjct: 518  CYNSVII-GLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKE 576

Query: 124  MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
            ML  G+ P+      LI G C  GS  EA      M    V PD  TYS L  G     +
Sbjct: 577  MLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGK 636

Query: 184  ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
            + GA +++ + L KG  PD+ TY  +I G+C+ G + +  +L E M  +G   N+I Y+ 
Sbjct: 637  LQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNA 696

Query: 244  LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
            L++ +CK+G I+ A  L   +   GL  + VTY+ +I G CK   + KA +L++EM  K 
Sbjct: 697  LINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKG 756

Query: 304  ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            + P+SF + A++ G C KE  TE  +      +          N ++DG+ K G + EA 
Sbjct: 757  VPPDSFVYSALIDG-CRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEAN 815

Query: 364  QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            QL   +++K + P  VT+  LI   CK G + +A +    ++   L P+A+TYT  ++ Y
Sbjct: 816  QLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGY 875

Query: 424  CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
               G    + AL  EM  K I P  VT++V+I    K+    + ++L++DM   G    +
Sbjct: 876  NMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSK 935

Query: 484  ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
               + +I   C+ + + +  ++L ++    L  + AT + L+      G +  A  +L S
Sbjct: 936  NVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKS 995

Query: 544  LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
            +              +I       D   A  F  QM 
Sbjct: 996  MVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQMA 1032



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 247/544 (45%), Gaps = 20/544 (3%)

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
           V    ++  Y K G  + A   F    + G        N L+  L  A  +E    F N 
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M    V  D  TY+ L              +++ ++  KG  P +VTY V+I G C+ G 
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           V+E  +L+++M  +G   +V  YS+L+    K  R  EA  +L EM + GLKP  V Y+ 
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           LI G  +Q    +A ++  EM ++ +  N F + A++ G+C+   + +A    + +IM  
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              D   YN MI+GY+K  N      L  ++ +  + P+  T   +I G C++G + DA 
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           R+ + +   G++P+AV YTT +  + +EG  Q  + +L+ M+ K + P  + Y  VI GL
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK  K++EA   L +M   G+ P+  TY  +I  +CK  +++ A +   +M    + P  
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPND 586

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
                LIDG C  G    A  +   +   ++      Y+ +I      G +  AM    +
Sbjct: 587 VVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSE 646

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
            +EK                    G  PD      ++  F + G +G  F+L   M + G
Sbjct: 647 FLEK--------------------GLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKG 686

Query: 639 LLPD 642
           + P+
Sbjct: 687 ISPN 690



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 121/491 (24%), Positives = 209/491 (42%), Gaps = 65/491 (13%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQGFKLNVIAYSVLLS 246
           W+ +  L+     PD+V   +      Q+ + +  L     V    GF   + ++S+L  
Sbjct: 54  WESLLPLVSNKLSPDVVHSVITK----QVNDPKRLLDFFNWVQFQMGFSQKLQSFSILAL 109

Query: 247 SMCKS---GRIDEALGLLYEMEAVGLKPDL---------------------------VTY 276
            +C S    R D  +  +  M + G    L                           V +
Sbjct: 110 ILCNSRLFSRADSVVNQMIMMSSGGYSEILDSLIKSCKEFDLNNVNGNENSNNNDRGVVF 169

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG-----AILLGLCEKEMITEARMYF 331
            +LI G  K+    +A+  +  + +KR   N F  G      +L  L +   +     ++
Sbjct: 170 ELLIDGYKKKGLFDEAVSFF--LGAKR---NGFVVGLLCCNGLLSDLLKANKLELFWRFY 224

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           + ++ +N + DV  Y  +I+ + + GN  E  +L  ++ EK  SPS+VT+N +I G C+ 
Sbjct: 225 NGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRA 284

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G+V +A  L   +   GL     TY+  ++ + ++        +L+EM +K + P HV Y
Sbjct: 285 GEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAY 344

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           T +I G  +Q    EA ++ E+M   GV  +  TYN +++  CK  D+ KA  LLN+M +
Sbjct: 345 TALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIM 404

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             ++P + TYN +I+G     +      LL  +++ N+  T      II   C  G +  
Sbjct: 405 VGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIED 464

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           A         + FEI            M+S G  P+  I   ++    Q G       + 
Sbjct: 465 A--------SRVFEI------------MVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRIL 504

Query: 632 AVMIKSGLLPD 642
            VM K G+ PD
Sbjct: 505 KVMDKKGVQPD 515


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 181/641 (28%), Positives = 311/641 (48%), Gaps = 23/641 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVS 57
           +L   Y +TG V D   V+  MK+L L  S++  N LL         D++W +   ++ +
Sbjct: 178 VLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGA 237

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +VYT S +I+  C+   L+ A   ++E        +VV+ N ++   C+ G  E A
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
            G    M  YGL PD F+Y  +I+GLC  G  ++A    ++M   G+ P+ + YS L  G
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F        A+K+++++   G  P+ +TY  LI G C++G +    ++ + M   G+  +
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMAD 417

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + Y++++    +    +EA  LL EM   G+ P++ TYSI+I GLC+  +  +A  L  
Sbjct: 418 TMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLE 477

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M +  + PN+F +  ++ G C +   + A      +   N   D+  YN +I G   +G
Sbjct: 478 QMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVG 537

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EA++ Y +++EK   P+  T+  LI+G+   G +  A +LL  +   GL P+   Y 
Sbjct: 538 KMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYA 597

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +  Y +  N++++ + L+ M  K + P +  Y +VI  L     +Q AV +L  +   
Sbjct: 598 QILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKN 657

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD + Y ++I  FCK  D+ KA  LL++M    +EP  + YN LIDG C + D+ +A
Sbjct: 658 GLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHA 717

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             +  S+    +    V YTT+I  +C  GD+  A+  + +                   
Sbjct: 718 RNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNE------------------- 758

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
            ML+ G  PD  +  V+       GDL     +   MI  G
Sbjct: 759 -MLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARG 798



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 178/672 (26%), Positives = 304/672 (45%), Gaps = 95/672 (14%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSE----TP 60
            Y +   +  A  V+ +M+E    +++ TYN+L+  L     + + +   K  E     P
Sbjct: 252 AYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVP 311

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            + +T   +I+GLC++ R   A   L E +     P+VV  + ++  + + G A+ A  +
Sbjct: 312 -DGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKI 370

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M   G+ P+  +Y+ LI GLC  G M  A      M + G   D +TY+++ +G   
Sbjct: 371 VKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLR 430

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
                 A+ ++ ++   G  P++ TY+++I G CQIG  E    L E M++ G K N   
Sbjct: 431 QHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFV 490

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+S  C+ G    A   L +M    L PDL  Y+ LI GL    K+ +AI+ Y+EM 
Sbjct: 491 YAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEML 550

Query: 301 SKR-----------------------------------ISPNSFAHGAILLG-------- 317
            K                                    ++PN F +  IL G        
Sbjct: 551 EKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLE 610

Query: 318 --------LCEKEMITEARMY------------------FDSLIMSN-CIQDVVLYNIMI 350
                   + EK ++ + R+Y                    S+I  N  + D ++Y  +I
Sbjct: 611 KVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLI 670

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            G+ K  ++ +AV L  ++ +K I P I  +N+LI GFCK+  ++ AR + ++I   GL 
Sbjct: 671 SGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLP 730

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+ VTYTT ++ YC+ G+I+  + L  EM T+ + P    Y+V+  G      LQ+A+ +
Sbjct: 731 PNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFI 790

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
            E+M   G      ++NT++  FCK   L++  + L+ M   ++ P+  T   ++ GL  
Sbjct: 791 TEEMIARGYAIIS-SFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGE 849

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTT-------------------IIKAHCAEGDVHK 571
            G L  A  + V LQ+ N S     + +                   +I++HC +G + K
Sbjct: 850 AGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHNMIQSHCKQGYLDK 909

Query: 572 AMTFFCQMVEKG 583
           A+     +V KG
Sbjct: 910 ALMLHDALVAKG 921



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 159/606 (26%), Positives = 277/606 (45%), Gaps = 50/606 (8%)

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
           +G + G   V L+ ++  Y K G       +  LM   GL P     N L+  L  A ++
Sbjct: 165 SGSDQGRRPVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADAL 224

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +   +    M   G+ PD  TYS L + +  +  +  A KV++++   G   ++VTY  L
Sbjct: 225 DLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTL 284

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G C+ G +EE    ++ M   G   +   Y  +++ +CK GR D+A  LL EM   GL
Sbjct: 285 IGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGL 344

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P++V YS LI G  +Q    +A ++  EM +  + PN   +  ++ GLC+   +  A  
Sbjct: 345 MPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASR 404

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               +     + D + YN++I+G+++  N  EA  L  ++ +  ISP++ T++ +I G C
Sbjct: 405 ILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLC 464

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           + G+   A  LL+ +   GL+P+A  Y   ++ YC EG+       L++M  + + P   
Sbjct: 465 QIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLY 524

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            Y  +I GL    K+ EA++  ++M   G  P+  TY  +I  +    +L KA QLL+QM
Sbjct: 525 CYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQM 584

Query: 510 W--------------------LHNLEPTSAT---------------YNILIDGLCVNGDL 534
                                  NLE  S+T               Y I+I  L  +G +
Sbjct: 585 LNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHM 644

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY--- 591
           + A  +L  ++++ +    + Y ++I   C   D+ KA+    +M +KG E  I  Y   
Sbjct: 645 QAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNAL 704

Query: 592 ------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                        ++ F  ++  G PP+      ++  + + GD+    +L   M+  G+
Sbjct: 705 IDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGV 764

Query: 640 LPDKFL 645
            PD F+
Sbjct: 765 APDAFV 770


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 170/568 (29%), Positives = 290/568 (51%), Gaps = 15/568 (2%)

Query: 31  IQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           + TY +LL         D     +D+++      NV+  SI+IDGLC+  R  DA+   +
Sbjct: 9   VYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFR 68

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
              G       V   A++S   K    + A  +   M  +G  P+  +YN LI GLC   
Sbjct: 69  AMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNN 128

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-------D 200
             + A E    M      P  +TY+ L  G     ++  A  + Q++L + S        
Sbjct: 129 EPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCS 188

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P+++TY+VLI G C+   V + ++L E M ++G   +VI Y++L+  +CK  ++  A  +
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L EM   G  P+LVTY+ L+ GLC+  +V  A+ L  +M  +  +PN   +G ++ GLC+
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              + +A      +I      D+++YN++I+G  K   + E++ L R+ +   I P +VT
Sbjct: 309 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 368

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           ++S+IYG C++ ++ +A RLL  +K  G  P  + Y+T ++  C+ G +     L + M 
Sbjct: 369 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMA 428

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
                   VTY+ +I GLCK  ++ EA  LL  M  +G  P  +TYN++I+  C    L 
Sbjct: 429 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 488

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI-----SLTKVA 555
           +A +L+ +M   N  P++ TYNILI G+C    + +A  LL   +   +     +L  +A
Sbjct: 489 EAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIA 548

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           Y+++I   C  G V +A+ +F +M++ G
Sbjct: 549 YSSLIDGLCKAGRVAEALDYFQEMIDNG 576



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 158/496 (31%), Positives = 244/496 (49%), Gaps = 48/496 (9%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + +IDGLC+ +    A    +     E  PS+V+ N ++    + G  E A  LF
Sbjct: 113 NVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALF 172

Query: 122 CLMLKYGLH-------PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
             ML    H       P+  +Y++LI GLC A  + +A+E    M   G  PD ITY+IL
Sbjct: 173 QEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTIL 232

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G    S+++ AW+V++++L  G  P++VTY  L+ G C+   V + L L   M  +G 
Sbjct: 233 VDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGC 292

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             NV+ Y  L+  +CK GR+ +A  +L +M   G  PDL+ Y++LI GLCK D+V ++I 
Sbjct: 293 TPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIA 352

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L     S  I P+   + +++ GLC    + EA      +    C  DV+LY+ +IDG  
Sbjct: 353 LLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLC 412

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K G + EA  LY  +        +VT+++LI G CK G+V +A  LL  +   G  PS +
Sbjct: 413 KAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTM 472

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE-- 472
           TY + +   C+  ++   + L++EME     P+ VTY ++I G+C+  ++  AV LLE  
Sbjct: 473 TYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQA 532

Query: 473 --------------------------------------DMYVIGVTPDQITYNTIIRSFC 494
                                                 +M   GV PD ITY+ ++    
Sbjct: 533 KARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLK 592

Query: 495 KCKDLRKAFQL-LNQM 509
           K KDL +   L L+QM
Sbjct: 593 KSKDLHELRHLVLDQM 608



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 237/471 (50%), Gaps = 17/471 (3%)

Query: 22  MKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYD----DIKVSETPRNVYTNSIVI 70
           MK ++   S+ TYN+LL  L       R   +  ++ D    D+    +P NV T S++I
Sbjct: 140 MKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSP-NVITYSVLI 198

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           DGLC+ +R+  A+  L+    +   P V++   ++   CK      A  +   ML  G  
Sbjct: 199 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 258

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  +YN L+HGLC A  + +AL    DM   G  P+ +TY  L  G   + ++  A  +
Sbjct: 259 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 318

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           +  ++ KG  PD++ Y +LI G C+   V+E + L    +S G K +V+ YS ++  +C+
Sbjct: 319 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 378

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           S R+DEA  LL  +++ G  PD++ YS LI GLCK  KV +A  LY  M       +   
Sbjct: 379 SNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVT 438

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ GLC+   + EA +    ++        + YN +I G   L ++ EA++L  ++ 
Sbjct: 439 YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEME 498

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH-----GLEPSAVTYTTFMNAYCE 425
               +PS VT+N LI+G C+  +V  A  LL+  K       G     + Y++ ++  C+
Sbjct: 499 RSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCK 558

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            G +   L   QEM    + P H+TY+++++GL K   L E   L+ D  V
Sbjct: 559 AGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMV 609



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 233/470 (49%), Gaps = 7/470 (1%)

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            PD ++Y  L+ G C  G +++A    ++M    + P+    SIL  G     +   A +
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
             + +   G   D V YT L+ G  +   +++ L +   M   G + NV+ Y+ L+  +C
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR------ 303
           K+   D A  L   M++V   P +VTY+ L+ GL +  K+ +A+ L+ EM  +R      
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 304 -ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             SPN   +  ++ GLC+   +++A    +S+    C  DV+ Y I++DG  K   +  A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            ++ R++++    P++VT+NSL++G C+  +V+DA  L+  +   G  P+ VTY T ++ 
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+ G ++   A+L +M  K   P  + Y ++I GLCK  ++ E++ LL      G+ PD
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TY+++I   C+   L +A +LL  +      P    Y+ LIDGLC  G +  A  L  
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            +         V Y+T+I   C  G V +A     +MV  G   S   Y 
Sbjct: 426 VMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYN 475



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 204/428 (47%), Gaps = 22/428 (5%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +V  Y+ LL   C+ G ID+A     EM +  L P++   SILI GLCK  +   A++ +
Sbjct: 8   DVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCF 67

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             M    I  ++  + A+L GL +++ + +A      +    C  +VV YN +IDG  K 
Sbjct: 68  RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKN 127

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI---KLHGLE--- 410
                A +L+  +     SPS+VT+N+L+ G  + GK+  A  L   +   + H ++   
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRC 187

Query: 411 -PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P+ +TY+  ++  C+   + + + LL+ M+ +   P  +TYT+++ GLCK+ K+  A +
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 247

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +L +M   G  P+ +TYN+++   C+ + +  A  L+  M      P   TY  LIDGLC
Sbjct: 248 VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLC 307

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             G +K+A  +L  + +   +   + Y  +I   C    V +++    + V  G +  + 
Sbjct: 308 KVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVV 367

Query: 590 DYTKSFF-----------CMML----SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
            Y+   +           C +L    S G PPD  +   ++    + G +   F+L  VM
Sbjct: 368 TYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM 427

Query: 635 IKSGLLPD 642
              G   D
Sbjct: 428 AGDGCDAD 435



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 121/252 (48%), Gaps = 7/252 (2%)

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           C  DV  Y  ++ G+ + G I +A + + ++  K + P++   + LI G CK  +  DA 
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           R    ++  G+    V YT  ++   +E  + + LA+L EM      P  VTY  +I GL
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW---LHNLE 515
           CK  +   A +L E M  +  +P  +TYNT++    +   L +A  L  +M     H+++
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 516 ----PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
               P   TY++LIDGLC    +  A  LL S++    S   + YT ++   C E  V  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 572 AMTFFCQMVEKG 583
           A     +M++ G
Sbjct: 245 AWEVLREMLDAG 256


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 172/574 (29%), Positives = 286/574 (49%), Gaps = 19/574 (3%)

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
           A K F P VV+ + I+S  CK G    A  +   M + G++PD  +Y I++  LC AG +
Sbjct: 2   AEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKV 61

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +EA E  + M   G   + + Y+ L  G      I  A+K+++++  KG +PD +TY  +
Sbjct: 62  DEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTI 121

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + G C++G V E  +  + M S+G+  +V+AY+ LL ++ K G++ EA GL   M+    
Sbjct: 122 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADR 181

Query: 270 K--PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           K  PDL+TY+ LI G C+ +K  +A++L+ ++ +K   P++  + +ILLGL  K  + EA
Sbjct: 182 KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 241

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F  ++ S C  +   Y+I++ G+ ++GN+   ++LY ++ EKR SP ++  N++I  
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDM 301

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK  KV DA ++L+ +   G  P  VTY   ++  C+   + +   L   M      P 
Sbjct: 302 LCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 361

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            V+Y+VV+ GLCK  K+ +A  L + M    + PD +T+N ++   CK   L +A  LL+
Sbjct: 362 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD 421

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M  HN+ P   T   L+ GLC +     A  L   + E       + +  ++   C EG
Sbjct: 422 VMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREG 481

Query: 568 DVHKAMTFFCQMVEKGFEISIR-----------------DYTKSFFCMMLSNGFPPDQEI 610
            + +A+ FF  MV+   E S                   D    +F  M  +G  PD   
Sbjct: 482 KLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVA 541

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
              ++    + G       L   M + G L D F
Sbjct: 542 YNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 159/543 (29%), Positives = 263/543 (48%), Gaps = 54/543 (9%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M   G EPD +TYS +  G     +++ A ++++++  KG +PD+ TYT+++   C+ G 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           V+E  +L   M+ +G   N +AY+ L++ +CK   I+ A  LL EM + G +PD +TY+ 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           ++ GLC+  KV +A Q ++ M S+  SP+  A+  +L  L ++  + EA   F ++ M++
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 339 --CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                D++ YN +IDG+ ++    EA++L++ +I K   P  VT+NS++ G  +   + +
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  +   +   G  P+  TY+  ++ +C  GN+ R L L +EM  K   P  +    VI 
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ------------ 504
            LCK  K+ +A ++LE+M  IG  PD +TYN ++   CK   + KA +            
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360

Query: 505 -----------------------LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
                                  L ++M    L P   T+NIL+DGLC  G L  A  LL
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF----------------E 585
             + EHN+    V  TT++   C +    +A+  F  MVEKG                 E
Sbjct: 421 DVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCRE 480

Query: 586 ISIRDYTKSFFCMMLSNG-FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
             +      F  M+ S+G F PD      ++ A  + G +    +    M  SG  PD  
Sbjct: 481 GKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYV 540

Query: 645 LIN 647
             N
Sbjct: 541 AYN 543



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 256/497 (51%), Gaps = 11/497 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSE-TPRNV 63
           R G V +A  +  KM E     +   YN+L+  L    + +  + L +++      P N+
Sbjct: 57  RAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNI 116

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             N+I + GLC+  ++ +A  F      + + P VV+ N ++    K G    A GLF  
Sbjct: 117 TYNTI-LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKT 175

Query: 124 M--LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
           M      + PD  +YN LI G C     +EA++   D+   G  PD +TY+ +  G    
Sbjct: 176 MDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARK 235

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           S +  A ++ +K++  G  P+  TY++++ G+C++GN+   L+L E M  + F  +V+  
Sbjct: 236 SNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLC 295

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++  +CK+ ++D+A  +L EM  +G  PD+VTY+IL+ GLCK + V KA +L++ M  
Sbjct: 296 NAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD 355

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
              +P+  ++  +L GLC+   + +AR+ FD +I    + DVV +NI++DG  K G + E
Sbjct: 356 NGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDE 415

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L   + E  + P  VT  +L++G C++ +  +A RL   +   G     + +   + 
Sbjct: 416 AKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLA 475

Query: 422 AYCEEGNIQRLLALLQEMETKAIG---PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
             C EG + + L   + M  K+ G   P  VTYT ++  L +  ++ +AV   + M   G
Sbjct: 476 GLCREGKLAQALLFFKSM-VKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSG 534

Query: 479 VTPDQITYNTIIRSFCK 495
             PD + YNT++    K
Sbjct: 535 CAPDYVAYNTLMNGLRK 551


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 168/533 (31%), Positives = 277/533 (51%), Gaps = 2/533 (0%)

Query: 62   NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            N++T +I+I GLC+   +  A   L+E        +V+  N ++   C     + A  LF
Sbjct: 876  NMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELF 935

Query: 122  CLMLKYG-LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M + G   PD F+Y+ ++  L  +G +++A     DM   G  P+ +TYS L  G   
Sbjct: 936  KEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCK 995

Query: 181  LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              ++  A  ++Q++   G  P+IVTY  +I G+C++G ++E   L E M+  G + NV+ 
Sbjct: 996  AGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVT 1055

Query: 241  YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
            Y+VLL + CK G+ ++A+GL+  M   G  P+L TY+ L+   CK+D+V +A QL + M 
Sbjct: 1056 YTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMI 1115

Query: 301  SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
             K   PN  ++  ++ GLC+   + E  +  + ++ +NC+ D+V +N +ID   K   + 
Sbjct: 1116 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVD 1175

Query: 361  EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL-DTIKLHGLEPSAVTYTTF 419
             A +L+  + E   +P++VT+NSL++G CK+ +   A  LL +  +  G  P  +TY T 
Sbjct: 1176 IAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 1235

Query: 420  MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
            ++  C+   + R   L  +M +  + P  VTY++VI  LCK   + EA  +LE M   G 
Sbjct: 1236 IDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGF 1295

Query: 480  TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             P  ITY T+I  FCK  +L KA ++L  +      P   T++I ID L   G L+ A  
Sbjct: 1296 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 1355

Query: 540  LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            LL ++    +    V Y T++K  C       A+  F  M + G E     YT
Sbjct: 1356 LLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYT 1408



 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 153/533 (28%), Positives = 278/533 (52%), Gaps = 4/533 (0%)

Query: 33  TYNSLLYN-LRHTDIM--WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TY++L+   +R   I+  ++L+D++       +   +  ++ GLC   +  DA+L  +E 
Sbjct: 163 TYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM 222

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
           + K   P  V+ N +++   K    + A  L   M+  G  P+ FSYN ++HG C A  +
Sbjct: 223 S-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRV 281

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           E AL     M   G  PD ++Y+ +  G   L Q+  A +V+ K++ +G  P+++TY  L
Sbjct: 282 ENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTL 341

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + G+C++G+++  ++L   M  +G++ N I Y+ ++   C+   ++ A  +L  M   G 
Sbjct: 342 VDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGC 401

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            PD + YS +I G CK  K+ +A  L  +M  +   P+      ++  LC+   I  A+ 
Sbjct: 402 PPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQE 461

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
                I  +C  DVV Y+I+I    K   + EA      +++ R  P +VT+NS++ G C
Sbjct: 462 LLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLC 521

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K+ ++ DA  L D ++  G+ P  VTY+  ++++C++ N+     +L+ M+     P  V
Sbjct: 522 KSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVV 581

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY+ +I GLCK   + +A  + ++M   G  P+ +TYNT+I   CK   + +A ++L  M
Sbjct: 582 TYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIM 641

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
              +  P S TY  LI+GLC    L+ A  +L  +++      ++ Y T+++A
Sbjct: 642 RKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRA 694



 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 162/542 (29%), Positives = 276/542 (50%), Gaps = 2/542 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIK-VSET-PRNV 63
           + R G +  A  +  +M    LK     + S+L  L       D     + +S+T P + 
Sbjct: 171 FIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDS 230

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +I+GL +  RL DAI  L+E     F P+V S N ++  +CK    E A  L   
Sbjct: 231 VTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQ 290

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G  PD  SY  +I+GLC    ++EA    + M + G +P+ ITY  L  GF  +  
Sbjct: 291 MVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 350

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           + GA ++++K+  +G  P+ +TY  ++  +C+  ++E   ++ ++M+  G   + I YS 
Sbjct: 351 LDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYST 410

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++S  CK+G++ EA  LL +M   G +PD+   S LI  LCK   +  A +L        
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD 470

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +P+  A+  ++  LC+ + + EA  + D ++ + C  DVV YN ++DG  K   I +A 
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAF 530

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L+ ++    + P +VT++ +I+ FCK+  +  A ++L+ +K     P  VTY+  +N  
Sbjct: 531 LLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGL 590

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ G + +   + QEM      P  VTY  +I GLCK  K+++A ++LE M     TPD 
Sbjct: 591 CKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDS 650

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           ITY  +I   C    L +A+++L +M      P   TY  L+  L    +L+  + LL  
Sbjct: 651 ITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKE 710

Query: 544 LQ 545
           ++
Sbjct: 711 ME 712



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 163/536 (30%), Positives = 273/536 (50%), Gaps = 40/536 (7%)

Query: 33   TYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAI-LFLQE 88
            T+  L++ L R  DI   ++L  ++     P+NV  +++VI GLC   +L  A+ LF + 
Sbjct: 879  TFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEM 938

Query: 89   TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
                   P V + + I+    K G  + A  L   M+  G  P+  +Y+ L+HGLC AG 
Sbjct: 939  EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGK 998

Query: 149  MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
            ++EA      M R G  P+ +TY+ +  G   L +I  A+ ++++++  G  P++VTYTV
Sbjct: 999  LDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 1058

Query: 209  LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
            L+  +C+ G  E+ + L EVM+ +G+  N+  Y+ LL   CK   ++ A  LL  M   G
Sbjct: 1059 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 1118

Query: 269  LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
              P++V+Y+ +I GLCK  KVH+ + L  +M S    P+      I+  +C+   +  A 
Sbjct: 1119 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAY 1178

Query: 329  MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR-ISPSIVTFNSLIYG 387
              F+ +  S C  ++V YN ++ G  K     +A  L R++  K+  SP I+T+N++I G
Sbjct: 1179 ELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDG 1238

Query: 388  FCKNGKVADARRL-----------------------------------LDTIKLHGLEPS 412
             CK+ +V  A +L                                   L+ +  +G +P 
Sbjct: 1239 LCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPG 1298

Query: 413  AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            A+TY T ++ +C+ GN+ + L +LQ + +K   P  VT+++ I  L K+ +L++A +LLE
Sbjct: 1299 AITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLE 1358

Query: 473  DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
             M   G+ PD +TYNT+++ FC       A  L   M     EP +ATY  L+  L
Sbjct: 1359 TMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 1414



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/519 (29%), Positives = 260/519 (50%), Gaps = 22/519 (4%)

Query: 131  PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
            P+ F++ ILIHGLC AG +  A E   +M RHGV  + I ++++ KG     ++  A ++
Sbjct: 875  PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALEL 934

Query: 191  IQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
             +++   GS  PD+ TY+ ++    + G V++  +L E M+S+G   NV+ YS LL  +C
Sbjct: 935  FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLC 994

Query: 250  KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
            K+G++DEA  LL  M   G  P++VTY+ +I G CK  ++ +A  L  EM      PN  
Sbjct: 995  KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 1054

Query: 310  AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
             +  +L   C+     +A    + ++    + ++  YN ++D + K   +  A QL   +
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114

Query: 370  IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            I+K   P++V++N++I G CK  KV +   LL+ +  +   P  VT+ T ++A C+   +
Sbjct: 1115 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 1174

Query: 430  QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM-YVIGVTPDQITYNT 488
                 L   ++     P  VTY  ++ GLCK  +  +A  LL +M    G +PD ITYNT
Sbjct: 1175 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 1234

Query: 489  IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
            +I   CK K + +A++L  QM    L P   TY+I+I  LC    +  A+ +L  + ++ 
Sbjct: 1235 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 1294

Query: 549  ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ 608
                 + Y T+I   C  G++ KA+                        ++LS G  PD 
Sbjct: 1295 FDPGAITYGTLIDGFCKTGNLDKAL--------------------EILQLLLSKGSYPDV 1334

Query: 609  EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                + +    + G L    EL   M+++GL+PD    N
Sbjct: 1335 VTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYN 1373



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 236/483 (48%), Gaps = 1/483 (0%)

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  +Y+ LI G   AG +  A E  ++M R G++  A  +  + +G     Q S A    
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHF 219

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           +++  K   PD VTY  +I G  +   +++ ++L E M+  GF  NV +Y+ +L   CK+
Sbjct: 220 REM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKA 278

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            R++ AL LL +M   G  PD+V+Y+ +I GLCK D+V +A ++ ++M  +   PN   +
Sbjct: 279 NRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITY 338

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
           G ++ G C    +  A      +       + + YN ++  + +  ++  A Q+ + +I+
Sbjct: 339 GTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQ 398

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
               P  + ++++I GFCK GK+ +A  LL+ +   G  P     +T ++A C+   I  
Sbjct: 399 TGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDS 458

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              LL+        P  V Y+++I  LCK  +L EA   L+ M      PD +TYN+++ 
Sbjct: 459 AQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVD 518

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
             CK + +  AF L ++M    + P   TY+I+I   C + +L +A  +L  ++E     
Sbjct: 519 GLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVP 578

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEIC 611
             V Y+ +I   C  G V KA   F +M+  G   ++  Y      +   N      E+ 
Sbjct: 579 DVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEML 638

Query: 612 EVM 614
           E+M
Sbjct: 639 EIM 641



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 225/459 (49%), Gaps = 7/459 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           + +   V +A++++ +M        + +Y ++   L  L   D    + D +       N
Sbjct: 275 FCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPN 334

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T   ++DG C+   L  A+  +++   + + P+ ++ N IM  +C+    E A  +  
Sbjct: 335 VITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQ 394

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +M++ G  PDA +Y+ +I G C AG + EA +    M R G  PD    S L       +
Sbjct: 395 MMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAA 454

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            I  A ++++  +     PD+V Y++LI   C+   + E     +VM+      +V+ Y+
Sbjct: 455 AIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYN 514

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++  +CKS RI++A  L   M A G+ PD+VTYSI+I   CK + +  A ++   M   
Sbjct: 515 SVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEA 574

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
           +  P+   + A++ GLC+   + +A   F  ++   C  ++V YN +IDG  K+  + +A
Sbjct: 575 KCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQA 634

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            ++   + ++  +P  +T+  LI G C   ++ +A R+L  +K  G  P  +TY T + A
Sbjct: 635 AEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRA 694

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVT----YTVVIKG 457
             +  N++ +  LL+EME    G  +      +  VI+G
Sbjct: 695 LQKTNNLELVEQLLKEMEATEEGQWNANGARLHRFVIRG 733



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 216/461 (46%), Gaps = 32/461 (6%)

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           S+I G W             D VTY+ LI G+ + G +    +L + M  +G K +   +
Sbjct: 151 SRIEGQWG-----------GDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVH 199

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
             +L  +C +G+  +A+    EM      PD VTY+ +I GL K D++  AI+L  EM  
Sbjct: 200 KSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVD 258

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
              +PN F++  +L G C+   +  A    + ++   C  DVV Y  +I+G  KL  + E
Sbjct: 259 NGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDE 318

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A ++  ++I++   P+++T+ +L+ GFC+ G +  A  L+  +   G  P+A+TY   M+
Sbjct: 319 ACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMH 378

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C   +++R   +LQ M      P  + Y+ +I G CK  KL+EA  LLE M   G  P
Sbjct: 379 VFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRP 438

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D    +T+I + CK   +  A +LL      +  P    Y+ILI  LC    L  A+  L
Sbjct: 439 DVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWL 498

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
             + ++      V Y +++   C    ++ A   F +                    M +
Sbjct: 499 DVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDR--------------------MRA 538

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            G  PD     +++ +F +  +L S F++   M ++  +PD
Sbjct: 539 AGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPD 579



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 151/586 (25%), Positives = 268/586 (45%), Gaps = 60/586 (10%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVY 64
            ++G V DA  ++  M       ++ TY+SLL+ L      D    L   +  S    N+ 
Sbjct: 960  KSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIV 1019

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T + +IDG C+  R+ +A   L+E       P+VV+   ++  +CK G AE A GL  +M
Sbjct: 1020 TYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM 1079

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            ++ G  P+ F+YN L+   C    +E A +  + M + G  P+ ++Y+ +  G    +++
Sbjct: 1080 VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 1139

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
                 +++++L     PDIVT+  +I   C+   V+   +L  ++   G   N++ Y+ L
Sbjct: 1140 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 1199

Query: 245  LSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
            +  +CKS R D+A  LL EM    G  PD++TY+ +I GLCK  +V +A +L+ +M S  
Sbjct: 1200 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 1259

Query: 304  ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            ++P+   +  ++  LC+   + EA    + ++ +      + Y  +IDG+ K GN+ +A+
Sbjct: 1260 LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKAL 1319

Query: 364  QLYRQLIEKRISPSIVTF-----------------------------------NSLIYGF 388
            ++ + L+ K   P +VTF                                   N+L+ GF
Sbjct: 1320 EILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGF 1379

Query: 389  CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA------------LL 436
            C      DA  L + ++  G EP   TYTT +    ++ + + LLA            L 
Sbjct: 1380 CDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLN 1439

Query: 437  QEMETKAIGPTHVTYTV-----VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
             E+ +K      V   V     ++    K    Q+A ++ E M    V    + ++ ++ 
Sbjct: 1440 HELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNV----VLWSAMLG 1495

Query: 492  SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
             +   K   +AF L   M L  +EP + T+  L+   C  G L  A
Sbjct: 1496 VYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAA 1541



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 162/709 (22%), Positives = 299/709 (42%), Gaps = 112/709 (15%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
            ++  ++DA  +  +M+   +   + TY+ ++++     + D  + + + +K ++   +V 
Sbjct: 522  KSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVV 581

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T S +I+GLC+   +  A    QE  G    P++V+ N ++   CK+   E A  +  +M
Sbjct: 582  TYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIM 641

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG------F 178
             K    PD+ +Y  LI+GLC A  +EEA     +M   G  PD +TY  L +        
Sbjct: 642  RKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNL 701

Query: 179  HLLSQI--------SGAWKV----IQKLLIKGS---------DPDIVTYTVLICGYCQIG 217
             L+ Q+         G W      + + +I+G             + + T ++    Q G
Sbjct: 702  ELVEQLLKEMEATEEGQWNANGARLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKDQQG 761

Query: 218  NVE---EGLKLREVMLSQGFKLNVI-------AYSVLLSSMCK-SGRI------------ 254
                     ++  V    GF   ++       A+    +++ + +G++            
Sbjct: 762  QFSPRPHQYRVTAVATQGGFHHKIVRILNSRFAWEYAETALERFTGKLTTTVVGKVLQGV 821

Query: 255  ---DEALGLL-YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY-NEMCSKRISPNSF 309
               D ALG   +     G   D  T + L++ L +  +   A+Q+Y N++C    SPN F
Sbjct: 822  RNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCC---SPNMF 878

Query: 310  AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
                                                + I+I G  + G+IG A +L +++
Sbjct: 879  T-----------------------------------FTILIHGLCRAGDIGTAYELLKEM 903

Query: 370  IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-LEPSAVTYTTFMNAYCEEGN 428
                +  +++  N +I G C   K+  A  L   ++  G   P   TY+T +++  + G 
Sbjct: 904  PRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGK 963

Query: 429  IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
            +     L+++M +K   P  VTY+ ++ GLCK  KL EA  LL+ M   G +P+ +TYNT
Sbjct: 964  VDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 1023

Query: 489  IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
            II   CK   + +A+ LL +M     +P   TY +L+D  C  G  ++A  L+  + E  
Sbjct: 1024 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 1083

Query: 549  ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC--------- 597
                   Y +++   C + +V +A      M++KG   ++  Y    +  C         
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143

Query: 598  ----MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                 MLSN   PD      ++ A  +   +   +EL  ++ +SG  P+
Sbjct: 1144 LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPN 1192



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/560 (25%), Positives = 258/560 (46%), Gaps = 39/560 (6%)

Query: 5    VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETP 60
             + + G   DA+ ++  M E     ++ TYNSLL      D +      L   I+    P
Sbjct: 1062 AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP 1121

Query: 61   RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
             NV + + VI GLC+ +++ + +L L++       P +V+ N I+   CK    ++A  L
Sbjct: 1122 -NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL 1180

Query: 121  FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR-HGVEPDAITYSILAKGFH 179
            F L+ + G  P+  +YN L+HGLC +   ++A     +M R  G  PD ITY+ +  G  
Sbjct: 1181 FNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLC 1240

Query: 180  LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               ++  A+K+  ++L  G  PD VTY+++I   C+   ++E   + E+ML  GF    I
Sbjct: 1241 KSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAI 1300

Query: 240  AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
             Y  L+   CK+G +D+AL +L  + + G  PD+VT+SI I  L K+ ++ +A +L   M
Sbjct: 1301 TYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 1360

Query: 300  CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK---- 355
                + P++  +  +L G C+  +  +A   F+ +    C  D   Y  ++   V     
Sbjct: 1361 LRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSY 1420

Query: 356  ---LGNIGEAV-----QLYRQLIEK-----RISPSIVTFNSLIYGFCKNGKVADARRLLD 402
               L  + +++     +L  +L  K      +   +    +++  F K G   DAR++ +
Sbjct: 1421 KDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFE 1480

Query: 403  TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
             +     + + V ++  +  Y      ++   L + M  + + P  VT+  ++   C   
Sbjct: 1481 GMD----QRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAG 1536

Query: 463  KLQEAV-QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ----MWLHNLEPT 517
             L  AV + +      G+ P    ++ +I       DL     L+N+    M     +P+
Sbjct: 1537 LLDAAVDEFVSISRDYGLEPGVDHFSCVI-------DLLGRLGLVNEAEDLMLGMPCKPS 1589

Query: 518  SATYNILIDGLCVNGDLKNA 537
            +AT+N L+    + GD + A
Sbjct: 1590 AATWNCLLSAYKICGDFERA 1609



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 142/311 (45%), Gaps = 16/311 (5%)

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N +++  VK     +A  L+R  IE +     VT+++LI GF + GK+  A  L D +  
Sbjct: 130 NCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNR 189

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            GL+  A  + + +   C+ G     +   +EM +K   P  VTY  +I GL K  +L +
Sbjct: 190 KGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDD 248

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A++LLE+M   G  P+  +YNT++  FCK   +  A  LL QM      P   +Y  +I+
Sbjct: 249 AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVIN 308

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           GLC    +  A  ++  + +       + Y T++   C  GD+  A+    +M E+G+  
Sbjct: 309 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP 368

Query: 587 SIRDYTK--SFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           +   Y      FC             MM+  G PPD      ++  F + G L    +L 
Sbjct: 369 NAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLL 428

Query: 632 AVMIKSGLLPD 642
             MI+ G  PD
Sbjct: 429 EQMIRRGCRPD 439


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 175/613 (28%), Positives = 305/613 (49%), Gaps = 37/613 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N YT +I+  GLC+  R+ +A L  +E       P   + +A++  + + G  +    + 
Sbjct: 9   NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 68

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M+  G+  +  +YN+LIHGLC  G ME+A E    M   G +P++ T+ +L +G+   
Sbjct: 69  DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCRE 128

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A +++ ++  +   P  V+Y  +I G C   ++    KL E M   G K NV+ Y
Sbjct: 129 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVY 188

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S L+      GRI+EA  LL  M   G+ PD+  Y+ +I  L K  K+ +A     E+  
Sbjct: 189 STLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 248

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + + P++   GA +LG  +   +TEA  YFD ++    + +  LY ++I+G+ K GN+ E
Sbjct: 249 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 308

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ ++R L    + P + T ++ I+G  KNG+V +A ++   +K  GL P   TY++ ++
Sbjct: 309 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 368

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C++G +++   L  EM  K I P    Y  ++ GLCK   +Q A +L + M   G+ P
Sbjct: 369 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 428

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D +TY+T+I  +CK +++ +AF L ++M    ++P S  YN L+ G C  GD++ A  L 
Sbjct: 429 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 488

Query: 542 VSLQEHNISLT----------------------------------KVAYTTIIKAHCAEG 567
             + +   + T                                   V YTT+I  HC  G
Sbjct: 489 REMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 548

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
            + +A   F +M E+     I D   + F  M++ G  PD+    +++ A  +  +L   
Sbjct: 549 KMEEANLLFKEMQERNL---IVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA 605

Query: 628 FELAAVMIKSGLL 640
           F+L   ++  G+L
Sbjct: 606 FKLRDEVVGKGML 618



 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 185/589 (31%), Positives = 294/589 (49%), Gaps = 21/589 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL--YNLRHT-DIMWDLYDDIKVSETPRNVY 64
           + G +  A  ++  M  L  K + +T+  L+  Y   H      +L D+++      +  
Sbjct: 92  KFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAV 151

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           +   +I+GLC    L  A   L++       P+VV  + ++  Y   G  E A+ L   M
Sbjct: 152 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 211

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G+ PD F YN +I  L  AG MEEA  +  ++   G++PDA+T+     G+    ++
Sbjct: 212 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 271

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A K   ++L  G  P+   YTVLI G+ + GN+ E L +   + + G   +V   S  
Sbjct: 272 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 331

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  + K+GR+ EAL +  E++  GL PD+ TYS LI G CKQ +V KA +L++EMC K I
Sbjct: 332 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 391

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +PN F + A++ GLC+   I  AR  FD +       D V Y+ MIDGY K  N+ EA  
Sbjct: 392 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 451

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+ ++  K + P    +N+L++G CK G +  A  L   +   G   + +++ T ++ YC
Sbjct: 452 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYC 510

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA----------------- 467
           +   IQ    L QEM  K I P HVTYT VI   CK  K++EA                 
Sbjct: 511 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 570

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
             L E M   GV PD++TY  +I + CK  +L +AF+L +++    +      +++LI  
Sbjct: 571 FALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITA 630

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           LC   DL  A  LL  + E  +  +  A +T++++    G + +A   F
Sbjct: 631 LCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVF 679



 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 238/462 (51%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M + GL P+ ++Y I+  GLC A  M EA     +M + G++PD    S L  GF     
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I    ++   ++  G   +++TY VLI G C+ G +E+  ++ + M++ G K N   + +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+   C+   +  AL LL EME   L P  V+Y  +I GLC    +  A +L  +M    
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + PN   +  +++G   +  I EAR   D +  S    D+  YN +I    K G + EA 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
               ++  + + P  VTF + I G+ K GK+ +A +  D +  HGL P+   YT  +N +
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            + GN+   L++ + +    + P   T +  I GL K  ++QEA+++  ++   G+ PD 
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            TY+++I  FCK  ++ KAF+L ++M L  + P    YN L+DGLC +GD++ A  L   
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 420

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           + E  +    V Y+T+I  +C   +V +A + F +M  KG +
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ 462



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 166/541 (30%), Positives = 273/541 (50%), Gaps = 26/541 (4%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLC 74
           ++ KM    LK ++  Y++L+        + +   L D +  S    +++  + +I  L 
Sbjct: 172 LLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 231

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +  ++++A  +L E  G+   P  V+  A +  Y K G    A   F  ML +GL P+  
Sbjct: 232 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 291

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
            Y +LI+G   AG++ EAL     +   GV PD  T S    G     ++  A KV  +L
Sbjct: 292 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 351

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             KG  PD+ TY+ LI G+C+ G VE+  +L + M  +G   N+  Y+ L+  +CKSG I
Sbjct: 352 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 411

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
             A  L   M   GL+PD VTYS +I G CK + V +A  L++EM SK + P+SF + A+
Sbjct: 412 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 471

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G C++  + +A   F  ++        + +N +IDGY K   I EA QL++++I K+I
Sbjct: 472 VHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 530

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIK-----------------LHGLEPSAVTYT 417
            P  VT+ ++I   CK GK+ +A  L   ++                   G++P  VTY 
Sbjct: 531 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYG 590

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             + A+C+E N+     L  E+  K +      + ++I  LCK+  L EA +LL++M  +
Sbjct: 591 LVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGEL 650

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ P     +T++RSF +   + +A ++   +    L P + T   LID   VNG+L + 
Sbjct: 651 GLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT---LID--LVNGNLNDT 705

Query: 538 D 538
           D
Sbjct: 706 D 706



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 195/419 (46%), Gaps = 20/419 (4%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M  +G   N   Y+++ + +C++ R++EA     EM+  GLKPD    S LI G  ++  
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + + +++ + M S  I  N   +  ++ GLC+   + +A      +I   C  +   + +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I+GY +  N+G A++L  ++ ++ + PS V++ ++I G C    ++ A +LL+ +   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L+P+ V Y+T +  Y  EG I+    LL  M    + P    Y  +I  L K  K++EA 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
             L ++   G+ PD +T+   I  + K   + +A +  ++M  H L P +  Y +LI+G 
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
              G+L  A  +   L    +       +  I      G V +A+  F ++ EKG    +
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             Y+                     ++  F + G++   FEL   M   G+ P+ F+ N
Sbjct: 361 FTYSS--------------------LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYN 399



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 167/362 (46%), Gaps = 56/362 (15%)

Query: 3   AFVYS--RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           AF++   + G V +A+ V +++KE  L   + TY+SL+         +  ++L+D++ + 
Sbjct: 330 AFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK 389

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               N++  + ++DGLC+   +Q A         K   P  V+ + ++  YCK      A
Sbjct: 390 GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 449

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG-------------- 163
             LF  M   G+ P +F YN L+HG C  G ME+A+    +M + G              
Sbjct: 450 FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGY 509

Query: 164 --------------------VEPDAITYSIL---------AKGFHLLSQ--------ISG 186
                               + PD +TY+ +          +  +LL +        +  
Sbjct: 510 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDT 569

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
            + + +K++ KG  PD VTY ++I  +C+  N+ E  KLR+ ++ +G       + +L++
Sbjct: 570 VFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLIT 629

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           ++CK   + EA  LL EM  +GLKP L   S L+R   +  K+ +A +++  + S  + P
Sbjct: 630 ALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVP 689

Query: 307 NS 308
           ++
Sbjct: 690 DT 691


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  295 bits (755), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 168/532 (31%), Positives = 277/532 (52%), Gaps = 10/532 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETA-GKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           N  T ++V++GLC+      A   L+E   GK   P +V+ + +++ +CK G  + A  +
Sbjct: 8   NERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEI 67

Query: 121 FCLML-KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
              M+ + G+ PD  +Y  ++ GLC  G M+ A E   +M   GVEPD  T+S L  G+ 
Sbjct: 68  LREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWC 127

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ---IGNVEEGLKLREVMLSQGFKL 236
              ++  A K+ +++L      D V+ + LI G C+   IG   E  +  E+     +K 
Sbjct: 128 NARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKP 187

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +V+ Y+ L+   CKSG +++A+ +L  ME     P++VTYS L+ GLCK   + +A+ L+
Sbjct: 188 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 247

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             M SK   PN   +  ++ GLC    +  AR+  D +  + C  D V YN ++DGY +L
Sbjct: 248 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRL 307

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL-HGLEPSAVT 415
           G I EA QL++++  K   P  +T+  L+ GFC   ++ +AR LL+ +K   G++P  VT
Sbjct: 308 GRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 367

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y+  +  Y            +QEM  + + P  VTY+ +I GLCK  ++  A+++L+++ 
Sbjct: 368 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD 427

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
                PD +TY  +I   C      +A  LL +M    +EP+  T+N +I  LC  GD+ 
Sbjct: 428 ----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMD 483

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
            A  LLV++  H +    V YTT+++     G +  A   F  M  K  + S
Sbjct: 484 EAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSS 535



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 257/508 (50%), Gaps = 11/508 (2%)

Query: 92  KEF-GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK-YGLHPDAFSYNILIHGLCIAGSM 149
           +EF  P+  + N +++  CK      A  +   M     + PD  +Y+ +I+G C  G M
Sbjct: 2   REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61

Query: 150 EEALEFTNDM-GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           + A E   +M  R G+ PD +TY+ +  G     ++  A ++++++ +KG +PD  T++ 
Sbjct: 62  DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSA 121

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV- 267
           LI G+C    V+E LKL + +L+   +L+ ++ S L++ +C+  RI EA  L  EME   
Sbjct: 122 LITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE 181

Query: 268 --GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
               KPD+VTY+ LI G CK   + KA+++   M  ++  PN   + ++L GLC+   + 
Sbjct: 182 DGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 241

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +A   F  +    C+ +VV Y  +I G      +  A  L  ++         V++N+L+
Sbjct: 242 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALL 301

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA-I 444
            G+C+ G++ +A++L   +      P  +TYT  +  +C    ++    LL+ M+T A I
Sbjct: 302 DGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGI 361

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  VTY++V+ G  +  +  EA + +++M    V P+ +TY+++I   CK   +  A +
Sbjct: 362 DPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAME 421

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           +L  +     +P   TY I+I+GLC     + A  LL  +    +  +   + ++I A C
Sbjct: 422 VLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALC 477

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             GD+ +A      M   G E  +  YT
Sbjct: 478 RLGDMDEAWKLLVAMAAHGLEPGMVTYT 505



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 265/516 (51%), Gaps = 18/516 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           R G +  A  ++ +MK   ++    T+++L+    N R  D    LY +I  S    +  
Sbjct: 93  RDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAV 152

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++S +I GLC++ R+ +A    QE   +E G   P VV+  A++  +CK G  E A  + 
Sbjct: 153 SSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKML 212

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M      P+  +Y+ L+HGLC AG +++AL+    M   G  P+ +TY+ L  G    
Sbjct: 213 GVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAA 272

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  ++ ++       D V+Y  L+ GYC++G +EE  +L + M ++    + I Y
Sbjct: 273 HKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITY 332

Query: 242 SVLLSSMCKSGRIDEALGLLYEME-AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           + L+   C + R++EA  LL  M+ A G+ PD+VTYSI++ G  +  +  +A +   EM 
Sbjct: 333 TCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMI 392

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           ++ ++PN+  + +++ GLC+   +  A     ++       DVV Y I+I+G        
Sbjct: 393 ARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKP----DVVTYTIVIEGLCGTDRTE 448

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+ L  +++ KR+ PS+ TFNS+I   C+ G + +A +LL  +  HGLEP  VTYTT +
Sbjct: 449 EALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLL 508

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHV-------TYTVVIKGLCKQWKLQEAVQLLED 473
             +   G ++    L + M  KA   +          ++ +I+GLCK  ++ +A+ ++E+
Sbjct: 509 EGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEE 568

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           +      P +     I+    +     +A +L+N +
Sbjct: 569 LRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 604



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 165/601 (27%), Positives = 277/601 (46%), Gaps = 90/601 (14%)

Query: 32  QTYNSLLYNLRHTDIMWDLYDDIKVSETPRNV----YTNSIVIDGLCQQSRLQDAILFLQ 87
           +TYN ++  L    +    Y+ +K     ++V     T S VI+G C+Q  +  A   L+
Sbjct: 10  RTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILR 69

Query: 88  ETAGKE-FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           E   ++   P VV+  +++   C+ G  + A  +   M   G+ PD F+++ LI G C A
Sbjct: 70  EMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNA 129

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS---DPDI 203
             ++EAL+   ++       DA++ S L  G     +I  A+++ Q++ ++      PD+
Sbjct: 130 RKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDV 189

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           VTYT LI G+C+ GN+E+ +K+  VM  +    NV+ YS LL  +CK+G +D+AL L   
Sbjct: 190 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKV---------------------------------- 289
           M + G  P++VTY+ LI GLC   KV                                  
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309

Query: 290 -HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYN 347
             +A QL+ EM +K   P+   +  ++ G C    + EAR   +++  +  I  DVV Y+
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           I++ GY +     EA +  +++I + ++P+ VT++SLI G CK G+V  A  +L  +   
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD-- 427

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
             +P  VTYT  +   C     +  L LL+EM  K + P+  T+  VI  LC+   + EA
Sbjct: 428 --KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEA 485

Query: 468 VQLLEDMYVIGVTPDQITYNTI-------------------------------------- 489
            +LL  M   G+ P  +TY T+                                      
Sbjct: 486 WKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQA 545

Query: 490 ----IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
               IR  CK +++ KA  ++ ++     EP       ++DGL   G  + A  L+ S+ 
Sbjct: 546 FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSIS 605

Query: 546 E 546
           +
Sbjct: 606 K 606



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 200/416 (48%), Gaps = 17/416 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           + ++G +  A+ ++  M+      ++ TY+SLL+ L      D   DL+  +       N
Sbjct: 199 FCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPN 258

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +I GLC   ++  A L + E          VS NA++  YC+LG  E AK LF 
Sbjct: 259 VVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFK 318

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR-HGVEPDAITYSILAKGFHLL 181
            M      PD  +Y  L+ G C A  +EEA     +M    G++PD +TYSI+  G+   
Sbjct: 319 EMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRA 378

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A + IQ+++ +   P+ VTY+ LI G C+ G V   +++    L    K +V+ Y
Sbjct: 379 KRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEV----LKNVDKPDVVTY 434

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++++  +C + R +EAL LL EM    ++P + T++ +I  LC+   + +A +L   M +
Sbjct: 435 TIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA 494

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFD--------SLIMSNCIQDVVLYNIMIDGY 353
             + P    +  +L G      +  A   F+        S   +N + +   ++ +I G 
Sbjct: 495 HGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQA-FSALIRGL 553

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
            K   I +A+ +  +L  +   P+     +++ G  + G+  +A +L+++I   GL
Sbjct: 554 CKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609



 Score = 42.4 bits (98), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 20/130 (15%)

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQE-HNISLTKVAYTTIIKAHCAEGDVHKAMT 574
           P   TYN++++GLC       A  +L  +++  +++   V Y+T+I   C +G++ +A  
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 575 FFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
              +MV +                   +G  PD      ++    + G +    E+   M
Sbjct: 67  ILREMVTR-------------------DGMAPDVVTYTSVVDGLCRDGKMDRACEMVREM 107

Query: 635 IKSGLLPDKF 644
              G+ PDKF
Sbjct: 108 KLKGVEPDKF 117


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  295 bits (755), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 175/628 (27%), Positives = 309/628 (49%), Gaps = 49/628 (7%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N YT +I+  GLC+  R+ +A L  +E       P   + +A++  + + G  +    + 
Sbjct: 297 NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 356

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M+  G+  +  +YN+LIHGLC  G ME+A E    M   G +P++ T+ +L +G+   
Sbjct: 357 DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCRE 416

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A +++ ++  +   P  V+Y  +I G C   ++    KL E M   G K NV+ Y
Sbjct: 417 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVY 476

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S+L+ +    GRI+EA  LL  M   G+ PD+  Y+ +I  L K  K+ +A     E+  
Sbjct: 477 SILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 536

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + + P++   GA +LG  +   +TEA  YFD ++    + +  LY ++I+G+ K GN+ E
Sbjct: 537 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 596

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ ++R+L    + P + T ++ I+G  KNG+V +A ++   +K  GL P   TY++ ++
Sbjct: 597 ALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 656

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C++G +++   L  EM  K I P    Y  ++ GLCK   +Q A +L + M   G+ P
Sbjct: 657 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 716

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D +TY+T+I  +CK +++ +AF L ++M    ++P S  YN L+ G C  GD++ A  L 
Sbjct: 717 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 776

Query: 542 VSLQEHNISLT----------------------------------KVAYTTIIKAHCAEG 567
             + +   + T                                   V YTT+I  HC  G
Sbjct: 777 REMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 836

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICE 612
            + +A   F +M E+   +    YT                + F  M++ G  PD+    
Sbjct: 837 KMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYG 896

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           +++ A  +  +L   F+L   ++  G+L
Sbjct: 897 LVIYAHCKEDNLVEAFKLRDEVVGKGML 924



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 173/618 (27%), Positives = 312/618 (50%), Gaps = 73/618 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRN 62
           Y R GM+ +A  V    K   + +S+   NSLL +L    +M   W +Y+ +  ++   +
Sbjct: 168 YKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFD 227

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT + ++  LC+   L+ A   L E                                  
Sbjct: 228 VYTYTYLVGALCKTGDLRGAKRVLIE---------------------------------- 253

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + GL+P+ F Y+++I G+C  G ++EA+E    MG  G+ P+  TY+I+  G     
Sbjct: 254 -MDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAK 312

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +++ A    +++   G  PD    + LI G+ + G+++E L++++VM+S G  +N+I Y+
Sbjct: 313 RMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYN 372

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           VL+  +CK G++++A  +L  M  +G KP+  T+ +LI G C++  + +A++L +EM  +
Sbjct: 373 VLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKR 432

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P++ ++GA++ GLC  + ++ A    + +  S    +VV+Y+I+I  Y   G I EA
Sbjct: 433 NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEA 492

Query: 363 VQL---------------YRQLIE--------------------KRISPSIVTFNSLIYG 387
            +L               Y  +I                     + + P  VTF + I G
Sbjct: 493 RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 552

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           + K GK+ +A +  D +  HGL P+   YT  +N + + GN+   L++ + +    + P 
Sbjct: 553 YSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPD 612

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             T +  I GL K  ++QEA+++  ++   G+ PD  TY+++I  FCK  ++ KAF+L +
Sbjct: 613 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 672

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M L  + P    YN L+DGLC +GD++ A  L   + E  +    V Y+T+I  +C   
Sbjct: 673 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 732

Query: 568 DVHKAMTFFCQMVEKGFE 585
           +V +A + F +M  KG +
Sbjct: 733 NVAEAFSLFHEMPSKGVQ 750



 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 179/594 (30%), Positives = 287/594 (48%), Gaps = 21/594 (3%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +L D+++      +  +   +I+GLC    L  A   L++       P+VV  + ++  Y
Sbjct: 424 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAY 483

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
              G  E A+ L   M   G+ PD F YN +I  L  AG MEEA  +  ++   G++PDA
Sbjct: 484 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 543

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +T+     G+    +++ A K   ++L  G  P+   YTVLI G+ + GN+ E L +   
Sbjct: 544 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRR 603

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           + + G   +V   S  +  + K+GR+ EAL +  E++  GL PD+ TYS LI G CKQ +
Sbjct: 604 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 663

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V KA +L++EMC K I+PN F + A++ GLC+   I  AR  FD +       D V Y+ 
Sbjct: 664 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 723

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           MIDGY K  N+ EA  L+ ++  K + P    +N+L++G CK G +  A  L   +   G
Sbjct: 724 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 783

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
              + +++ T ++ YC+   IQ    L QEM  K I P HVTYT VI   CK  K++EA 
Sbjct: 784 F-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEAN 842

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            L ++M    +  D +TY +++  + K     + F L  +M    ++P   TY ++I   
Sbjct: 843 LLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAH 902

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C   +L  A  L   +    +      +  +I A C   D+ +A     +M E G +   
Sbjct: 903 CKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLK--- 959

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                            P    C  ++ +FH+ G +     +   +   GL+PD
Sbjct: 960 -----------------PSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 996



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 165/531 (31%), Positives = 269/531 (50%), Gaps = 1/531 (0%)

Query: 50   LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
            L D +  S    +++  + +I  L +  ++++A  +L E  G+   P  V+  A +  Y 
Sbjct: 495  LLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYS 554

Query: 110  KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
            K G    A   F  ML +GL P+   Y +LI+G   AG++ EAL     +   GV PD  
Sbjct: 555  KTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQ 614

Query: 170  TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
            T S    G     ++  A KV  +L  KG  PD+ TY+ LI G+C+ G VE+  +L + M
Sbjct: 615  TCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM 674

Query: 230  LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
              +G   N+  Y+ L+  +CKSG I  A  L   M   GL+PD VTYS +I G CK + V
Sbjct: 675  CLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENV 734

Query: 290  HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             +A  L++EM SK + P+SF + A++ G C++  + +A   F  ++        + +N +
Sbjct: 735  AEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTL 793

Query: 350  IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
            IDGY K   I EA QL++++I K+I P  VT+ ++I   CK GK+ +A  L   ++   L
Sbjct: 794  IDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 853

Query: 410  EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
                VTYT+ M  Y + G    + AL ++M  K + P  VTY +VI   CK+  L EA +
Sbjct: 854  IVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFK 913

Query: 470  LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
            L +++   G+      ++ +I + CK +DL +A +LL++M    L+P+ A  N L+    
Sbjct: 914  LRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFH 973

Query: 530  VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
              G +  A  +   ++   +         ++  +  + D   A     Q+V
Sbjct: 974  EAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 113/491 (23%), Positives = 212/491 (43%), Gaps = 85/491 (17%)

Query: 239 IAYSVLLSSMCKSGRIDEAL-------------------GLLYEMEAVGLKP-------- 271
           + + +L+ S  + G +DEA                     LL ++   G+          
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218

Query: 272 --------DLVTYSILIRGLCKQ-----------------------------------DK 288
                   D+ TY+ L+  LCK                                      
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + +A++L   M  K + PN++ +  I  GLC  + + EA++ F+ +  +    D    + 
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDG+++ G+I E +++   ++   I  +++T+N LI+G CK GK+  A  +L  +   G
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
            +P++ T+   +  YC E N+ R L LL EME + + P+ V+Y  +I GLC    L  A 
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 458

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +LLE M   G+ P+ + Y+ +I ++     + +A +LL+ M    + P    YN +I  L
Sbjct: 459 KLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCL 518

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG----- 583
              G ++ A   L+ +Q   +    V +   I  +   G + +A  +F +M++ G     
Sbjct: 519 SKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNN 578

Query: 584 --FEISIRDYTK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             + + I  + K        S F  + + G  PD + C   +    + G +    ++ + 
Sbjct: 579 PLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSE 638

Query: 634 MIKSGLLPDKF 644
           + + GL+PD F
Sbjct: 639 LKEKGLVPDVF 649



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 3/175 (1%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
            + + G + +A  +  +M+E +L V   TY SL+Y    L  +  ++ L++ +       +
Sbjct: 832  HCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPD 891

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
              T  +VI   C++  L +A     E  GK         + +++  CK      A  L  
Sbjct: 892  EVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLD 951

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             M + GL P   + N L+     AG M+EA      +   G+ PD  T   L  G
Sbjct: 952  EMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  295 bits (754), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 167/581 (28%), Positives = 291/581 (50%), Gaps = 26/581 (4%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
             +T  I+I GLCQ  R+ +A   L E   K+  P     N +++  CK+G  + A+ + 
Sbjct: 91  TAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVL 150

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +ML+    PD  +Y  LI G C   +++EA +    M   G+ PD + Y+ L  G    
Sbjct: 151 KMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQ 210

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           +Q+    K++++++  G +PD  +Y  ++   C+ G  EE  K+ E M+ +    +V+ Y
Sbjct: 211 NQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTY 270

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   CK  ++DEA  LL +M      P ++TY+ LI G  + D++  A ++  +M  
Sbjct: 271 NSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFK 330

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             ISP+   +  +L GLC+   + EA    + ++  +C  DVV Y+I+++G  KLG + +
Sbjct: 331 AGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDD 390

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L   ++E+   P++VTFN++I GFCK GKV +  ++L+ +K     P  VTY+T ++
Sbjct: 391 ARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLID 450

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC+   +Q   A+L       I P   +Y+ +++GLC   K++EA ++++ M   G  P
Sbjct: 451 GYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPP 504

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
               Y  II   C  +   +A ++L  M     EP   TY+ILI+GLC    +++A  +L
Sbjct: 505 TSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVL 564

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
             + E         YT++I   C                    +I+  D     F  M  
Sbjct: 565 DVMLEKGCVPDVATYTSLIDGFC--------------------KINKMDAAYQCFKTMRD 604

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +G  PD+    +++  F Q G++    E+  +M++ G  PD
Sbjct: 605 SGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPD 645



 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 171/603 (28%), Positives = 293/603 (48%), Gaps = 24/603 (3%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N  T   +I G  +    +  +    E   + F P V++ N I+  YC++G  ++ + 
Sbjct: 22  PSN-STYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIG--DLDRA 78

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L     K    P AF+Y ILIHGLC    ++EA +  ++M +    PDA  Y+ L  G  
Sbjct: 79  LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
            + +I  A  V++ +L +   PD++TYT LI G CQ   ++E  KL E M   G   + +
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTV 198

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           AY+ LL+ +CK  +++E   LL EM   G +PD  +Y+ ++  LC+  K  +A ++  +M
Sbjct: 199 AYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKM 258

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K+  P+   + +++ G C+   + EA    + ++   C   V+ Y  +I G+ +   +
Sbjct: 259 IEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRL 318

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A ++   + +  ISP +VT+N L+ G CK GK+ +A  LL+ +      P  VTY+  
Sbjct: 319 ADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSIL 378

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N  C+ G +     LL+ M  +   P  VT+  +I G CK  K+ E  ++LE M  +  
Sbjct: 379 VNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSC 438

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           TPD +TY+T+I  +CK   ++ AF +L       + P  A+Y+ +++GLC  G ++ A  
Sbjct: 439 TPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQE 492

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY-------- 591
           ++  + +     T   Y  II   C      +A+     M E+G E ++  Y        
Sbjct: 493 VMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLC 552

Query: 592 -TK------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
            TK      +   +ML  G  PD      ++  F +   + + ++    M  SG  PDK 
Sbjct: 553 KTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKL 612

Query: 645 LIN 647
             N
Sbjct: 613 AYN 615



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 255/490 (52%), Gaps = 11/490 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNV 63
           +T  + +A  ++ KMKE  L      YN+LL  L   + + +    L + ++    P + 
Sbjct: 174 QTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREP-DT 232

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           ++ + V+  LC+  + ++A   L++   K+ GP VV+ N++M  +CK+   + A+ L   
Sbjct: 233 FSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLED 292

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+     P   +Y  LI G   A  + +A     DM + G+ PD +TY+ L  G     +
Sbjct: 293 MVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGK 352

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A ++++ ++ K   PD+VTY++L+ G C++G V++   L E+ML +G + N++ ++ 
Sbjct: 353 LEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNT 412

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++   CK+G++DE   +L  M+ V   PD+VTYS LI G CK +++  A  +        
Sbjct: 413 MIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILG------ 466

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ISP+  ++ ++L GLC    + EA+   D +    C      Y ++I G   +    EA+
Sbjct: 467 ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEAL 526

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           ++ + + E+   P++ T++ LI G CK  +V DA  +LD +   G  P   TYT+ ++ +
Sbjct: 527 KMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGF 586

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+   +       + M      P  + Y ++I G C+   +++A+++++ M   G  PD 
Sbjct: 587 CKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDA 646

Query: 484 ITYNTIIRSF 493
            TY +++RS 
Sbjct: 647 ATYFSLMRSL 656



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 229/501 (45%), Gaps = 13/501 (2%)

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           E   F  +      +P   TY  L  GF          ++  ++L +   PD++T+  ++
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 211 CGYCQIGNVEEGLK-LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
             YCQIG+++  L   R  M           Y +L+  +C+  RIDEA  LL EM     
Sbjct: 67  KAYCQIGDLDRALSHFRGKMWCSP---TAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            PD   Y+ LI GLCK  K+  A  +   M  +   P+   + ++++G C+   + EAR 
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARK 183

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             + +  S    D V YN +++G  K   + E  +L  +++E    P   ++N+++   C
Sbjct: 184 LMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLC 243

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           ++GK  +A ++L+ +      P  VTY + M+ +C+   +     LL++M  +   PT +
Sbjct: 244 ESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVI 303

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TYT +I G  +  +L +A +++EDM+  G++PD +TYN ++   CK   L +A +LL  M
Sbjct: 304 TYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVM 363

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
              +  P   TY+IL++GLC  G + +A  LL  + E       V + T+I   C  G V
Sbjct: 364 VEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKV 423

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN---------GFPPDQEICEVMLIAFHQ 620
            +       M E      +  Y+        +N         G  PD+     ML     
Sbjct: 424 DEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCS 483

Query: 621 GGDLGSVFELAAVMIKSGLLP 641
            G +    E+  +M K G  P
Sbjct: 484 TGKVEEAQEVMDLMTKQGCPP 504



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 189/380 (49%), Gaps = 38/380 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           +SR   + DA  V+  M +  +   + TYN LL                           
Sbjct: 312 FSRADRLADAYRVMEDMFKAGISPDLVTYNCLL--------------------------- 344

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
                DGLC+  +L++A   L+    K+  P VV+ + +++  CKLG  + A+ L  +ML
Sbjct: 345 -----DGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMML 399

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G  P+  ++N +I G C AG ++E  +    M      PD +TYS L  G+   +++ 
Sbjct: 400 ERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQ 459

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A+ ++      G  PD  +Y+ ++ G C  G VEE  ++ ++M  QG       Y++++
Sbjct: 460 DAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALII 513

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +C   R DEAL +L  M   G +P+L TYSILI GLCK  +V  AI + + M  K   
Sbjct: 514 GGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCV 573

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+   + +++ G C+   +  A   F ++  S C  D + YNI+I G+ + GN+ +A+++
Sbjct: 574 PDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEV 633

Query: 366 YRQLIEKRISPSIVTFNSLI 385
            + ++EK  +P   T+ SL+
Sbjct: 634 MQLMLEKGCNPDAATYFSLM 653



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 129/278 (46%), Gaps = 38/278 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + + G V +   V+  MKE+     + TY++L                            
Sbjct: 417 FCKAGKVDEGHKVLELMKEVSCTPDVVTYSTL---------------------------- 448

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
               IDG C+ +R+QDA   L         P   S ++++   C  G  E A+ +  LM 
Sbjct: 449 ----IDGYCKANRMQDAFAILG------ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMT 498

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K G  P +  Y ++I GLC     +EAL+    M   G EP+  TYSIL  G     ++ 
Sbjct: 499 KQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVE 558

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  V+  +L KG  PD+ TYT LI G+C+I  ++   +  + M   G + + +AY++L+
Sbjct: 559 DAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILI 618

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           S  C+SG +++A+ ++  M   G  PD  TY  L+R L
Sbjct: 619 SGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  294 bits (753), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 188/686 (27%), Positives = 329/686 (47%), Gaps = 67/686 (9%)

Query: 6   YSRTGMVHDA--VFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNV 63
           Y R GM+ +A  VF +AK             +S+L +L   + +  + +   V     N 
Sbjct: 166 YKRMGMLDEAANVFFVAK------------NDSILISLIRCNSLRSMGEKGLVP----NT 209

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           YT +I+  GLC+  R+ +A L  +E       P   + +A++  + + G  +    +  +
Sbjct: 210 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDV 269

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G+  +  +YN+LIHGLC  G ME+A E    M   G +P++ T+ +L +G+     
Sbjct: 270 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHN 329

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A +++ ++  +   P  V+Y  +I G C   ++    KL E M   G K NV+ YS 
Sbjct: 330 MGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYST 389

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+      GRI+EA  LL  M   G+ PD+  Y+ +I  L K  K+ +A     E+  + 
Sbjct: 390 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 449

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P++   GA +LG  +   +TEA  YFD ++    + +  LY ++I+G+ K GN+ EA+
Sbjct: 450 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 509

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            ++R L    + P + T ++ I+G  KNG+V +A ++   +K  GL P   TY++ ++ +
Sbjct: 510 SIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 569

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++G +++   L  EM  K I P    Y  ++ GLCK   +Q A +L + M   G+ PD 
Sbjct: 570 CKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDS 629

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TY+T+I  +CK +++ +AF L ++M    ++P S  YN L+ G C  GD++ A  L   
Sbjct: 630 VTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE 689

Query: 544 LQEHNISLT----------------------------------KVAYTTIIKAHCAEGDV 569
           + +   + T                                   V YTT+I  HC  G +
Sbjct: 690 MLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKM 749

Query: 570 HKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVM 614
            +A   F +M E+   +    YT                + F  M++ G  PD+    ++
Sbjct: 750 EEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLV 809

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLL 640
           + A  +  +L   F+L   ++  G+L
Sbjct: 810 IYAHCKEDNLVEAFKLRDEVVGKGML 835



 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 177/655 (27%), Positives = 313/655 (47%), Gaps = 19/655 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSET---PRN 62
           + R G + + + +   M    + +++ TYN L++ L     M    + +K   T     N
Sbjct: 254 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN 313

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T  ++I+G C++  +  A+  L E   +   PS VS  A+++  C      +A  L  
Sbjct: 314 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 373

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   GL P+   Y+ LI G    G +EEA    + M   GV PD   Y+ +        
Sbjct: 374 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 433

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A   + ++  +G  PD VT+   I GY + G + E  K  + ML  G   N   Y+
Sbjct: 434 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 493

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           VL++   K+G + EAL +   + A+G+ PD+ T S  I GL K  +V +A+++++E+  K
Sbjct: 494 VLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 553

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+ F + +++ G C++  + +A    D + +     ++ +YN ++DG  K G+I  A
Sbjct: 554 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 613

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +L+  + EK + P  VT++++I G+CK+  VA+A  L   +   G++P +  Y   ++ 
Sbjct: 614 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 673

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+EG++++ + L +EM  K    T +++  +I G CK  K+QEA QL ++M    + PD
Sbjct: 674 CCKEGDMEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 732

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TY T+I   CK   + +A  L  +M   NL   + TY  L+ G    G       L  
Sbjct: 733 HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFE 792

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF--EISIRDYTKSFFCM-- 598
            +    +   +V Y  +I AHC E ++ +A     ++V KG   + +I D   +  C   
Sbjct: 793 KMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 852

Query: 599 -----------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                      M   G  P    C  ++ +FH+ G +     +   +   GL+PD
Sbjct: 853 DLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 907



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 170/566 (30%), Positives = 284/566 (50%), Gaps = 4/566 (0%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLC 74
           ++ KM    LK ++  Y++L+        + +   L D +  S    +++  + +I  L 
Sbjct: 371 LLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 430

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +  ++++A  +L E  G+   P  V+  A +  Y K G    A   F  ML +GL P+  
Sbjct: 431 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 490

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
            Y +LI+G   AG++ EAL     +   GV PD  T S    G     ++  A KV  +L
Sbjct: 491 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 550

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             KG  PD+ TY+ LI G+C+ G VE+  +L + M  +G   N+  Y+ L+  +CKSG I
Sbjct: 551 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 610

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
             A  L   M   GL+PD VTYS +I G CK + V +A  L++EM SK + P+SF + A+
Sbjct: 611 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 670

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G C++  + +A   F  ++        + +N +IDGY K   I EA QL++++I K+I
Sbjct: 671 VHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 729

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P  VT+ ++I   CK GK+ +A  L   ++   L    VTYT+ M  Y + G    + A
Sbjct: 730 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFA 789

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L ++M  K + P  VTY +VI   CK+  L EA +L +++   G+      ++ +I + C
Sbjct: 790 LFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALC 849

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K +DL +A +LL++M    L+P+ A  + L+      G +  A  +   ++   +     
Sbjct: 850 KREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTT 909

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMV 580
               ++  +  + D   A     Q+V
Sbjct: 910 TLIDLVNGNLNDTDSEDARNLIKQLV 935



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 239/506 (47%), Gaps = 4/506 (0%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDL---YDDIKVSETPRNV 63
           S+ G + +A   + +++   LK    T+ + +     T  M +    +D++       N 
Sbjct: 430 SKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNN 489

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
              +++I+G  +   L +A+   +        P V + +A +    K G  + A  +F  
Sbjct: 490 PLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSE 549

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           + + GL PD F+Y+ LI G C  G +E+A E  ++M   G+ P+   Y+ L  G      
Sbjct: 550 LKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD 609

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I  A K+   +  KG +PD VTY+ +I GYC+  NV E   L   M S+G + +   Y+ 
Sbjct: 610 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 669

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+   CK G +++A+ L  EM   G    L +++ LI G CK  K+ +A QL+ EM +K+
Sbjct: 670 LVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQ 728

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I P+   +  ++   C+   + EA + F  +   N I D V Y  ++ GY KLG   E  
Sbjct: 729 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 788

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L+ +++ K + P  VT+  +IY  CK   + +A +L D +   G+      +   + A 
Sbjct: 789 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 848

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+  ++     LL EM    + P+    + +++   +  K+ EA ++ E +  +G+ PD 
Sbjct: 849 CKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT 908

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQM 509
            T   ++       D   A  L+ Q+
Sbjct: 909 TTLIDLVNGNLNDTDSEDARNLIKQL 934



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 212/468 (45%), Gaps = 40/468 (8%)

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREV------------------MLSQGFKLNVI 239
           GS P  V + +LI  Y ++G ++E   +  V                  M  +G   N  
Sbjct: 153 GSSP--VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTY 210

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+++ + +C++ R++EA     EM+  GLKPD    S LI G  ++  + + +++ + M
Sbjct: 211 TYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM 270

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            S  I  N   +  ++ GLC+   + +A      +I   C  +   + ++I+GY +  N+
Sbjct: 271 VSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNM 330

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           G A++L  ++ ++ + PS V++ ++I G C    ++ A +LL+ +   GL+P+ V Y+T 
Sbjct: 331 GRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL 390

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +  Y  EG I+    LL  M    + P    Y  +I  L K  K++EA   L ++   G+
Sbjct: 391 IMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 450

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD +T+   I  + K   + +A +  ++M  H L P +  Y +LI+G    G+L  A  
Sbjct: 451 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 510

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           +   L    +       +  I      G V +A+  F ++ EKG    +  Y+       
Sbjct: 511 IFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS------ 564

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                         ++  F + G++   FEL   M   G+ P+ F+ N
Sbjct: 565 --------------LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYN 598


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 161/487 (33%), Positives = 271/487 (55%), Gaps = 6/487 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V S N ++S +C  G    A  L   M   G  PDAF++  +I  +  AG ++ A++ 
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDH 169

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              MG    +P+ +TY+ L   F    ++  A K+++++  +G  P++VTY VL+   C+
Sbjct: 170 LRSMG---CDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +  V     + + M+  GF  NV+ ++ L+   CK G +D+A  LL  M A G++P++VT
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           YS LI GLCK  K  +A ++  EM ++ ++P++F + A++ GLC+ + I EA      + 
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            S C  DVV+Y+ +I  + K G + EA +  +++ ++R SP +VT+N++I G CK GK+A
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406

Query: 396 DARRLLDTIKLHG-LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
           +A+ +L+ ++  G + P  VTY+T +N  C+   +     LL  M      P  VTYT +
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 466

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I GLCK  +L+EA  LL+ M   G  P+ +TY T+I   CK + + +A +++ +M     
Sbjct: 467 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 526

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA--YTTIIKAHCAEGDVHKA 572
            P   TYN +++GLCV+G +K A  L+  +++     +  A  Y TI+ A  +   V +A
Sbjct: 527 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 586

Query: 573 MTFFCQM 579
                QM
Sbjct: 587 EQLLEQM 593



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 170/558 (30%), Positives = 272/558 (48%), Gaps = 13/558 (2%)

Query: 36  SLLYNLRHTDIMW-----DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA 90
           + + NL H+   W     DL      S TPR V     V++ L + ++L  A       +
Sbjct: 14  TAILNLLHSGRPWSAIEPDLSPFSGASTTPRIV---GRVVNSL-KDAKLALAFFRWAPAS 69

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
              F  +  S N+++    +      A  LF   L     PD  SYNI+I G C AG + 
Sbjct: 70  IPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLH 129

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            ALE   +M   G  PDA T++ +         + GA   ++ +   G DP++VTYT LI
Sbjct: 130 AALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALI 186

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
             + +   +EE +KL E M  +G   N++ Y+VL+ ++CK   +  A  ++ +M   G  
Sbjct: 187 AAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFA 246

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P+++T++ L+ G CK+  V  A +L   M +K + PN   + A++ GLC+ +   EA+  
Sbjct: 247 PNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 306

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            + +       D   Y+ +I G  K   I EA Q+ R++     +P +V ++S+I+ FCK
Sbjct: 307 LEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 366

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM-ETKAIGPTHV 449
           +GK+ +A++ L  ++     P  VTY T ++  C+ G I     +L++M E+  + P  V
Sbjct: 367 SGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVV 426

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY+ VI GLCK   L EA +LL+ M   G  PD +TY TII   CKC  L +A  LL  M
Sbjct: 427 TYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGM 486

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
                 P   TY  LI GLC    +  A+ ++  ++        V Y T++   C  G +
Sbjct: 487 KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 546

Query: 570 HKAMTFFCQMVEKGFEIS 587
            +A     +M +   E S
Sbjct: 547 KEAQQLVQRMKDGRAECS 564



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 242/472 (51%), Gaps = 3/472 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           +   G +H A+ ++ +MK         T+  ++  + +   +    D ++      NV T
Sbjct: 122 FCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVT 181

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + +I    +  +L++A+  L+E   +   P++V+ N ++   CKL     A+ +   M+
Sbjct: 182 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 241

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G  P+  ++N L+ G C  G++++A +    M   G+ P+ +TYS L  G     +  
Sbjct: 242 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 301

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A +V++++  +G  PD  TY+ LI G C+   +EE  ++   M   G   +V+ YS ++
Sbjct: 302 EAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 361

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC-SKRI 304
            + CKSG++ EA   L EM      PD+VTY+ +I GLCK  K+ +A  +  +M  S  +
Sbjct: 362 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDV 421

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+   +  ++ GLC+ +M+ EA+   D +  + C  DVV Y  +IDG  K G + EA  
Sbjct: 422 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEY 481

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L + +     +P++VT+ +LI G CK  KV +A R+++ ++  G  P+ VTY T +N  C
Sbjct: 482 LLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLC 541

Query: 425 EEGNIQRLLALLQEME--TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
             G I+    L+Q M+       P   TY  ++  L     +QEA QLLE M
Sbjct: 542 VSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 243/488 (49%), Gaps = 4/488 (0%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G    AFS+N L+  L       EA +          EPD  +Y+I+  GF     +  A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++++++   G  PD  T+T +I      G+++  +   + + S G   NV+ Y+ L+++
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVTYTALIAA 188

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
             ++ +++EA+ LL EM   G  P+LVTY++L+  LCK   V  A  +  +M     +PN
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
                +++ G C++  + +AR     ++      +VV Y+ +IDG  K     EA ++  
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 308

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++  + ++P   T+++LI+G CK  K+ +A ++L  +   G  P  V Y++ ++A+C+ G
Sbjct: 309 EMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 368

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-VTPDQITY 486
            +      LQEM  +   P  VTY  VI GLCK  K+ EA  +LE M   G V PD +TY
Sbjct: 369 KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTY 428

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           +T+I   CK   L +A +LL++M      P   TY  +IDGLC  G L+ A+ LL  ++ 
Sbjct: 429 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 488

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPP 606
              +   V YTT+I   C    V +A     +M   G   ++  Y      + +S     
Sbjct: 489 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKE 548

Query: 607 DQEICEVM 614
            Q++ + M
Sbjct: 549 AQQLVQRM 556



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 229/426 (53%), Gaps = 6/426 (1%)

Query: 22  MKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSR 78
           ++ +    ++ TY +L+        + +   L ++++    P N+ T ++++D LC+ S 
Sbjct: 170 LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 229

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           +  A   +++     F P+V++ N+++  +CK G  + A+ L  +M+  G+ P+  +Y+ 
Sbjct: 230 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSA 289

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI GLC +    EA E   +M   GV PDA TYS L  G     +I  A ++++++   G
Sbjct: 290 LIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 349

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD+V Y+ +I  +C+ G + E  K  + M  Q    +V+ Y+ ++  +CK G+I EA 
Sbjct: 350 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 409

Query: 259 GLLYEMEAVG-LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
            +L +M+  G + PD+VTYS +I GLCK D + +A +L + MC    +P+   +  I+ G
Sbjct: 410 VILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDG 469

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC+   + EA      +  + C  +VV Y  +I G  K   + EA ++  ++      P+
Sbjct: 470 LCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 529

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE--PSAVTYTTFMNAYCEEGNIQRLLAL 435
           +VT+N+++ G C +G++ +A++L+  +K    E  P A TY T +NA      +Q    L
Sbjct: 530 LVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQL 589

Query: 436 LQEMET 441
           L++M++
Sbjct: 590 LEQMKS 595



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 155/337 (45%), Gaps = 41/337 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           + + G V DA  ++  M    ++ ++ TY++L+  L  +    +   + +++K      +
Sbjct: 259 FCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPD 318

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T S +I GLC+  ++++A   L+  AG    P VV  ++I+  +CK G    A+    
Sbjct: 319 AFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQ 378

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG-VEPDAITYSILAKGFHLL 181
            M K    PD  +YN +I GLC  G + EA      M   G V PD +TYS +  G    
Sbjct: 379 EMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKS 438

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A K++ ++   G +PD+VTYT +I G C+ G +EE   L + M   G   NV+ Y
Sbjct: 439 DMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTY 498

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY------------------------- 276
           + L+S +CK+ ++DEA  ++ EM   G  P+LVTY                         
Sbjct: 499 TTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKD 558

Query: 277 ------------SILIRGLCKQDKVHKAIQLYNEMCS 301
                         ++  L   D V +A QL  +M S
Sbjct: 559 GRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 77/197 (39%), Gaps = 23/197 (11%)

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P   +Y +VI G C    L  A++LLE+M   G  PD  T+  II +     DL  A   
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDH 169

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           L  M     +P   TY  LI        L+ A  LL  ++E       V Y  ++ A C 
Sbjct: 170 LRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
              V  A     +M+E GF  ++  +                      ++  F + G++ 
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNS--------------------LVDGFCKRGNVD 266

Query: 626 SVFELAAVMIKSGLLPD 642
              +L  +M+  G+ P+
Sbjct: 267 DARKLLGIMVAKGMRPN 283


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 165/524 (31%), Positives = 274/524 (52%), Gaps = 38/524 (7%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLM-LKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
           P V +   ++  +CK+G  +V KG   L  ++    P+ F+YN  I GLC  G+++EALE
Sbjct: 240 PDVYTYTNVIKAHCKVG--DVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALE 297

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
               M   G+ PD  TY++L  GF    +   A  + + +   G +P+  TYT LI G+ 
Sbjct: 298 VKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFI 357

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           + GN+EE L++++ M+++G KLNV+ Y+ ++  + K+G + +A+ L  EM   GL+PD  
Sbjct: 358 KEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTW 417

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY++LI G  K   + KA +L  EM +++++P+ F +  ++ GLC    + +A    D +
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM 477

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           I +    +V +Y  +I  YV+      A++L + +I   + P +  +N LI G C+  KV
Sbjct: 478 IRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKV 537

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +A+ LL  +   G++P+A TY  F+N Y + G IQ      ++M +  I P +V YT++
Sbjct: 538 EEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTIL 597

Query: 455 IKGLC-----------------------------------KQWKLQEAVQLLEDMYVIGV 479
           IKG C                                   K  K +EA+ +       GV
Sbjct: 598 IKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV 657

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD   YN++I  FCK  D+ KA QL ++M  + + P    YN LI+GLC  G++  A  
Sbjct: 658 VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARE 717

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L   ++E ++    V Y+TII  +C  G++ +A   F +M+ KG
Sbjct: 718 LFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKG 761



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 174/591 (29%), Positives = 308/591 (52%), Gaps = 5/591 (0%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKV---SETPR 61
            + + G V     V+++M E + K ++ TYN+ +  L  T  + +  +  K+        
Sbjct: 251 AHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGP 309

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + +T ++++DG C+Q R ++A L  +        P+  +  A++  + K G  E A  + 
Sbjct: 310 DGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIK 369

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  GL  +  +YN +I G+  AG M +A+   N+M   G+EPD  TY++L  G+   
Sbjct: 370 DEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKS 429

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             ++ A +++ ++  +   P   TY+VLI G C   ++++  ++ + M+  G K NV  Y
Sbjct: 430 HDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMY 489

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
             L+ +  +  R + A+ LL  M A G+ PDL  Y+ LI GLC+  KV +A  L  +M  
Sbjct: 490 GTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGE 549

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K I PN+  +GA +    +   I  A  YF  ++ S  + + V+Y I+I G+  +GN  E
Sbjct: 550 KGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVE 609

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+  ++ ++EK + P I  ++++I+   KNGK  +A  +       G+ P    Y + ++
Sbjct: 610 ALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLIS 669

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C+EG+I++   L  EM    I P  V Y  +I GLCK  ++ +A +L +++    + P
Sbjct: 670 GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVP 729

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D +TY+TII  +CK  +L +AF+L ++M    + P    Y ILIDG    G+L+ A  L 
Sbjct: 730 DVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF 789

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
              Q+ ++  +  A+ ++I + C  G V +A   F  MV+K    +I  YT
Sbjct: 790 HEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYT 839



 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 181/638 (28%), Positives = 305/638 (47%), Gaps = 24/638 (3%)

Query: 7    SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN-LRHTDIMW--DLYDDIKVSETPRNV 63
            ++ G +  A+ +  +M    L+    TYN L+   L+  D+    +L  ++K  +   + 
Sbjct: 392  AKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP 451

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            +T S++I GLC  S LQ A   L +       P+V     ++  Y +    E+A  L  +
Sbjct: 452  FTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKI 511

Query: 124  MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
            M+  G+ PD F YN LI GLC A  +EEA     DMG  G++P+A TY      +    +
Sbjct: 512  MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571

Query: 184  ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
            I  A +  + +L  G  P+ V YT+LI G+C +GN  E L   + ML +G   ++ AYS 
Sbjct: 572  IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631

Query: 244  LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
            ++ S+ K+G+  EA+G+  +    G+ PD+  Y+ LI G CK+  + KA QLY+EM    
Sbjct: 632  IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691

Query: 304  ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            I+PN   +  ++ GLC+   +T+AR  FD +   + + DVV Y+ +IDGY K GN+ EA 
Sbjct: 692  INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAF 751

Query: 364  QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +L+ ++I K ISP    +  LI G  K G +  A  L    +   +  S   + + ++++
Sbjct: 752  KLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSF 810

Query: 424  CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            C+ G +     L  +M  K + P  VTYT++I    K   ++EA QL  DM    + P+ 
Sbjct: 811  CKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNT 870

Query: 484  ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            +TY +++ S+ +  +  K   L   M    +   +  Y ++    C  G    A  LL  
Sbjct: 871  LTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 930

Query: 544  LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
                 I L    +  +I   C E  +   +    +M ++   +S                
Sbjct: 931  SLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLS---------------- 974

Query: 604  FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                 + C  +L+ F++ G+     ++  VM + G +P
Sbjct: 975  ----SKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 1008



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 253/527 (48%), Gaps = 16/527 (3%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           ++I I    + G + EA          G  P  I  + L +     + +   WKV   ++
Sbjct: 175 FDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMV 234

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
                PD+ TYT +I  +C++G+V +G K+    + +  K N+  Y+  +  +C++G +D
Sbjct: 235 EAKIVPDVYTYTNVIKAHCKVGDVIKG-KMVLSEMEKECKPNLFTYNAFIGGLCQTGAVD 293

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           EAL +   M   GL PD  TY++L+ G CKQ +  +A  ++  M S  ++PN F + A++
Sbjct: 294 EALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALI 353

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            G  ++  I EA    D +I      +VV YN MI G  K G + +A+ L+ +++   + 
Sbjct: 354 DGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLE 413

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P   T+N LI G+ K+  +A A  LL  +K   L PS  TY+  ++  C   ++Q+   +
Sbjct: 414 PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEV 473

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           L +M    + P    Y  +IK   ++ + + A++LL+ M   GV PD   YN +I   C+
Sbjct: 474 LDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCR 533

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
            K + +A  LL  M    ++P + TY   I+    +G+++ A+     +    I    V 
Sbjct: 534 AKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVI 593

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMML 600
           YT +IK HC  G+  +A++ F  M+EKG    IR Y+                  F   L
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             G  PD  +   ++  F + GD+    +L   M+ +G+ P+  + N
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYN 700



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 228/495 (46%), Gaps = 49/495 (9%)

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           ++  + + I  +  +G + E   +    +S+GF   +I  + L+  + K+  +     + 
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 262 YEMEAVGLKPDLVTYSILIR----------------------------------GLCKQD 287
             M    + PD+ TY+ +I+                                  GLC+  
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTG 290

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
            V +A+++   M  K + P+   +  ++ G C+++   EA++ F+S+  S    +   Y 
Sbjct: 291 AVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +IDG++K GNI EA+++  ++I + +  ++VT+N++I G  K G++A A  L + + + 
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA 410

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           GLEP   TY   ++ Y +  ++ +   LL EM+ + + P+  TY+V+I GLC    LQ+A
Sbjct: 411 GLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            ++L+ M   GV P+   Y T+I+++ +      A +LL  M  + + P    YN LI G
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG---- 583
           LC    ++ A  LLV + E  I      Y   I  +   G++  A  +F  M+  G    
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590

Query: 584 ---FEISIRDYTK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
              + I I+ +          S F  ML  G  PD      ++ +  + G       +  
Sbjct: 591 NVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFL 650

Query: 633 VMIKSGLLPDKFLIN 647
             +K+G++PD FL N
Sbjct: 651 KFLKTGVVPDVFLYN 665


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 168/530 (31%), Positives = 280/530 (52%), Gaps = 40/530 (7%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RH-------------------- 43
            + + G V DA+ +   M++L +  ++ TYN+L++ L +H                    
Sbjct: 322 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 381

Query: 44  TDIMWD------------------LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILF 85
           T I +                   L + ++   TP  V  N++ IDG C+   L DA+  
Sbjct: 382 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTL-IDGYCKMGNLGDALRI 440

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
             +   K   P+ V+LN+I+  +CK+G  E A+ +   ML  G   +  ++  +IH LC+
Sbjct: 441 RGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCM 500

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
               E AL F  +M    + P+    + L  G     + S A ++  +LL KG   ++VT
Sbjct: 501 NSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVT 560

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
              LI G C+ GN++E ++L + ML +GF L+ I Y+ L+S  CK G+++E   L  EM 
Sbjct: 561 TNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMV 620

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G++PD  TY++LI G+C+  K+ +A+ L+NE  S+ + PN + +G ++ G C+ + I 
Sbjct: 621 KQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIE 680

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           E    F  L+  N   + V+YN +I  Y + GN  EA +L+  +  K I P+  T++SLI
Sbjct: 681 EGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLI 740

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
           +G C  G++ DA+ L+D ++  GL P+ V YT  +  YC+ G + +++ +LQEM +  I 
Sbjct: 741 HGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH 800

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           P  +TYTV+I G  K   ++ A +LL +M   G+ PD +TYN +   FCK
Sbjct: 801 PNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCK 850



 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 169/585 (28%), Positives = 304/585 (51%), Gaps = 21/585 (3%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + ++  L + + L+ +  ++ ET  +   P V   +  ++ +CK G  E A  LF 
Sbjct: 279 VKTCTFLLSSLVKANELEKS-YWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFF 337

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K G+ P+  +YN LIHGLC  G+++EA  F   M + GV    ITYS+L  G   L 
Sbjct: 338 DMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLE 397

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           + + A  V+++ L KG  P+ V Y  LI GYC++GN+ + L++R  M+S+G   N +  +
Sbjct: 398 KFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLN 457

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++   CK G++++A  +L EM + G   +   ++ +I  LC   +   A++   EM  +
Sbjct: 458 SIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR 517

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN      ++ GLC++   ++A   +  L+      ++V  N +I G  K GN+ EA
Sbjct: 518 NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEA 577

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           V+L ++++E+      +T+N+LI G CK GKV +  +L   +   G+EP   TY   ++ 
Sbjct: 578 VRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHG 637

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C  G +   + L  E +++ + P   TY V+I G CK  K++E  +L  ++    +  +
Sbjct: 638 MCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 697

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            + YNT+IR++C+  +  +AF+L + M    + PT+ATY+ LI G+C  G +++A CL+ 
Sbjct: 698 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 757

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
            +++  +    V YT +I  +C  G + K +    +M    ++I                
Sbjct: 758 EMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM--SSYDIH--------------- 800

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              P++    VM+  + + GD+ +  +L   M+  G++PD    N
Sbjct: 801 ---PNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYN 842



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 135/269 (50%), Gaps = 5/269 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G V +   +  +M +  ++    TYN L++ +      D   +L+++ K  +   NVY
Sbjct: 605 KEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY 664

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T  ++IDG C+  ++++      E   +    + V  N ++  YC+ G    A  L   M
Sbjct: 665 TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 724

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G+ P   +Y+ LIHG+C  G ME+A    ++M + G+ P+ + Y+ L  G+  L Q+
Sbjct: 725 RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQM 784

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
                V+Q++      P+ +TYTV+I GY + G+++   KL   M+ +G   + + Y+VL
Sbjct: 785 DKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVL 844

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
            +  CK G+I+E  G L   + VG    L
Sbjct: 845 TNGFCKEGKIEE--GKLLAEDGVGFNSPL 871


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 165/587 (28%), Positives = 295/587 (50%), Gaps = 38/587 (6%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVS 57
           +L   Y +   + +       +K   L VSI   NSLL  L      D+ W++Y ++  S
Sbjct: 293 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 352

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NVYT +I+I+ LC+  ++                                   E  
Sbjct: 353 GVQVNVYTLNIMINALCKNQKI-----------------------------------ENT 377

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           K     M + G+ PD  +YN LI+  C  G +EEA E  + M   G++P   TY+ +  G
Sbjct: 378 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 437

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                +   A  V+ ++L  G  PD  TY +L+   C+  N+ +  ++ + M SQG   +
Sbjct: 438 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 497

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           ++++S L+  + K+G +D+AL    +M+  GL PD V Y+ILI G C+   + +A+++ +
Sbjct: 498 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 557

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  +    +   +  IL GLC+++M++EA   F  +       D   +  +I+GY K G
Sbjct: 558 EMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDG 617

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N+ +AV L+  +I++ + P +VT+N+LI GFCK  ++     L + +    + P+ ++Y 
Sbjct: 618 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYG 677

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N YC  G +     L  EM  K    T +T   ++KG C+     +A + L +M + 
Sbjct: 678 ILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK 737

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD ITYNT+I  F K +++ +AF L+N+M    L P   TYN++++G    G ++ A
Sbjct: 738 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 797

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           + +++ + E  ++  +  YT++I  H  + ++ +A     +M+++GF
Sbjct: 798 ELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 844



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/585 (24%), Positives = 286/585 (48%), Gaps = 24/585 (4%)

Query: 62  NVYTNSIVIDGLC----QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           N  +N +V D L     Q  +L++     +    K    S+ + N+++    K+G+ ++A
Sbjct: 283 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 342

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             ++  +++ G+  + ++ NI+I+ LC    +E    F +DM   GV PD +TY+ L   
Sbjct: 343 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 402

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +     +  A++++  +  KG  P + TY  +I G C+ G       + + ML  G   +
Sbjct: 403 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              Y++LL   C++  + +A  +  EM + G+ PDLV++S LI  L K   + +A++ + 
Sbjct: 463 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 522

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M +  ++P++  +  ++ G C   +++EA    D ++   C  DVV YN +++G  K  
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEK 582

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EA +L+ ++ E+ + P   TF +LI G+ K+G +  A  L + +    L+P  VTY 
Sbjct: 583 MLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYN 642

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T ++ +C+   ++++  L  +M ++ I P H++Y ++I G C    + EA +L ++M   
Sbjct: 643 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 702

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G     IT NTI++ +C+  +  KA + L+ M L  + P   TYN LI+G     ++  A
Sbjct: 703 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 762

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             L+  ++   +    + Y  I+     +G + +A     +M+E+G              
Sbjct: 763 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVN------------ 810

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                   PD+     ++       +L   F +   M++ G +PD
Sbjct: 811 --------PDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 241/498 (48%), Gaps = 17/498 (3%)

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
           G  G  P  + + +L + +    ++    +  + L  KG    I     L+ G  ++G V
Sbjct: 282 GNCGSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWV 339

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           +   ++ + ++  G ++NV   +++++++CK+ +I+     L +ME  G+ PD+VTY+ L
Sbjct: 340 DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 399

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I   C+Q  + +A +L + M  K + P  F + AI+ GLC+      A+   D ++    
Sbjct: 400 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 459

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             D   YNI++    +  N+ +A +++ ++  + + P +V+F++LI    KNG +  A +
Sbjct: 460 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 519

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
               +K  GL P  V YT  +  +C  G +   L +  EM  +      VTY  ++ GLC
Sbjct: 520 YFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLC 579

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K+  L EA +L  +M   GV PD  T+ T+I  + K  ++ KA  L   M   NL+P   
Sbjct: 580 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVV 639

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYN LIDG C   +++  + L   +    I    ++Y  +I  +C  G V +A   + +M
Sbjct: 640 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 699

Query: 580 VEKGFEISI-------RDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
           VEKGFE +I       + Y ++        F   ML  G  PD      ++  F +  ++
Sbjct: 700 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 759

Query: 625 GSVFELAAVMIKSGLLPD 642
              F L   M  SGLLPD
Sbjct: 760 DRAFALVNKMENSGLLPD 777



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 144/537 (26%), Positives = 252/537 (46%), Gaps = 16/537 (2%)

Query: 123 LMLKYG-LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
           L+L YG    +   +++L+     A  + E  E    +   G+       + L  G   +
Sbjct: 277 LVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKV 336

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  AW++ Q+++  G   ++ T  ++I   C+   +E        M  +G   +V+ Y
Sbjct: 337 GWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY 396

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+++ C+ G ++EA  L+  M   GLKP + TY+ +I GLCK  K  +A  + +EM  
Sbjct: 397 NTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK 456

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +SP++  +  +L+  C  + + +A   FD +     + D+V ++ +I    K G + +
Sbjct: 457 IGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQ 516

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A++ +R +    ++P  V +  LI GFC+NG +++A ++ D +   G     VTY T +N
Sbjct: 517 ALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILN 576

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+E  +     L  EM  + + P   T+T +I G  K   + +AV L E M    + P
Sbjct: 577 GLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKP 636

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D +TYNT+I  FCK  ++ K  +L N M    + P   +Y ILI+G C  G +  A  L 
Sbjct: 637 DVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLW 696

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTK- 593
             + E     T +   TI+K +C  G+  KA  F   M+ KG       +   I  + K 
Sbjct: 697 DEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKE 756

Query: 594 -------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                  +    M ++G  PD     V+L  F + G +     +   MI+ G+ PD+
Sbjct: 757 ENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 813



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 158/332 (47%), Gaps = 23/332 (6%)

Query: 313 AILLGLCEKEMITEARMYFDSLIMS--NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           A++L +  K  ++   +  +SL+++  NC  + +++++++  YV+   + E  + +R L 
Sbjct: 257 AVILRMVRKSGVSRVEI-VESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLK 315

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            K +  SI   NSL+ G  K G V  A  +   +   G++ +  T    +NA C+   I+
Sbjct: 316 SKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIE 375

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
              + L +ME K + P  VTY  +I   C+Q  L+EA +L++ M   G+ P   TYN II
Sbjct: 376 NTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAII 435

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CK     +A  +L++M    + P +ATYNIL+   C N ++ +A+ +   +    + 
Sbjct: 436 NGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVV 495

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEI 610
              V+++ +I      G + +A+ +F            RD        M + G  PD  I
Sbjct: 496 PDLVSFSALIGLLSKNGCLDQALKYF------------RD--------MKNAGLAPDNVI 535

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             +++  F + G +    ++   M++ G   D
Sbjct: 536 YTILIGGFCRNGVMSEALKVRDEMLEQGCXLD 567


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 165/587 (28%), Positives = 295/587 (50%), Gaps = 38/587 (6%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVS 57
           +L   Y +   + +       +K   L VSI   NSLL  L      D+ W++Y ++  S
Sbjct: 32  LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 91

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NVYT +I+I+ LC+  ++                                   E  
Sbjct: 92  GVQVNVYTLNIMINALCKNQKI-----------------------------------ENT 116

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           K     M + G+ PD  +YN LI+  C  G +EEA E  + M   G++P   TY+ +  G
Sbjct: 117 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 176

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                +   A  V+ ++L  G  PD  TY +L+   C+  N+ +  ++ + M SQG   +
Sbjct: 177 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 236

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           ++++S L+  + K+G +D+AL    +M+  GL PD V Y+ILI G C+   + +A+++ +
Sbjct: 237 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 296

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  +    +   +  IL GLC+++M++EA   F  +       D   +  +I+GY K G
Sbjct: 297 EMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDG 356

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N+ +AV L+  +I++ + P +VT+N+LI GFCK  ++     L + +    + P+ ++Y 
Sbjct: 357 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYG 416

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N YC  G +     L  EM  K    T +T   ++KG C+     +A + L +M + 
Sbjct: 417 ILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK 476

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD ITYNT+I  F K +++ +AF L+N+M    L P   TYN++++G    G ++ A
Sbjct: 477 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 536

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           + +++ + E  ++  +  YT++I  H  + ++ +A     +M+++GF
Sbjct: 537 ELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 583



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 148/567 (26%), Positives = 283/567 (49%), Gaps = 19/567 (3%)

Query: 62  NVYTNSIVIDGLC----QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           N  +N +V D L     Q  +L++     +    K    S+ + N+++    K+G+ ++A
Sbjct: 22  NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 81

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             ++  +++ G+  + ++ NI+I+ LC    +E    F +DM   GV PD +TY+ L   
Sbjct: 82  WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +     +  A++++  +  KG  P + TY  +I G C+ G       + + ML  G   +
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              Y++LL   C++  + +A  +  EM + G+ PDLV++S LI  L K   + +A++ + 
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 261

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M +  ++P++  +  ++ G C   +++EA    D ++   C+ DVV YN +++G  K  
Sbjct: 262 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 321

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EA +L+ ++ E+ + P   TF +LI G+ K+G +  A  L + +    L+P  VTY 
Sbjct: 322 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYN 381

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T ++ +C+   ++++  L  +M ++ I P H++Y ++I G C    + EA +L ++M   
Sbjct: 382 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 441

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G     IT NTI++ +C+  +  KA + L+ M L  + P   TYN LI+G     ++  A
Sbjct: 442 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 501

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT----- 592
             L+  ++   +    + Y  I+     +G + +A     +M+E+G       YT     
Sbjct: 502 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 561

Query: 593 -------KSFFCM---MLSNGFPPDQE 609
                  K  F +   ML  GF PD +
Sbjct: 562 HVTQNNLKEAFRVHDEMLQRGFVPDDK 588



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 241/498 (48%), Gaps = 17/498 (3%)

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
           G  G  P  + + +L + +    ++    +  + L  KG    I     L+ G  ++G V
Sbjct: 21  GNCGSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWV 78

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           +   ++ + ++  G ++NV   +++++++CK+ +I+     L +ME  G+ PD+VTY+ L
Sbjct: 79  DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 138

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I   C+Q  + +A +L + M  K + P  F + AI+ GLC+      A+   D ++    
Sbjct: 139 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 198

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             D   YNI++    +  N+ +A +++ ++  + + P +V+F++LI    KNG +  A +
Sbjct: 199 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 258

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
               +K  GL P  V YT  +  +C  G +   L +  EM  +      VTY  ++ GLC
Sbjct: 259 YFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLC 318

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K+  L EA +L  +M   GV PD  T+ T+I  + K  ++ KA  L   M   NL+P   
Sbjct: 319 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 378

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYN LIDG C   +++  + L   +    I    ++Y  +I  +C  G V +A   + +M
Sbjct: 379 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 438

Query: 580 VEKGFEISI-------RDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
           VEKGFE +I       + Y ++        F   ML  G  PD      ++  F +  ++
Sbjct: 439 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 498

Query: 625 GSVFELAAVMIKSGLLPD 642
              F L   M  SGLLPD
Sbjct: 499 DRAFALVNKMENSGLLPD 516



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 144/537 (26%), Positives = 252/537 (46%), Gaps = 16/537 (2%)

Query: 123 LMLKYG-LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
           L+L YG    +   +++L+     A  + E  E    +   G+       + L  G   +
Sbjct: 16  LVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKV 75

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  AW++ Q+++  G   ++ T  ++I   C+   +E        M  +G   +V+ Y
Sbjct: 76  GWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY 135

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+++ C+ G ++EA  L+  M   GLKP + TY+ +I GLCK  K  +A  + +EM  
Sbjct: 136 NTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK 195

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +SP++  +  +L+  C  + + +A   FD +     + D+V ++ +I    K G + +
Sbjct: 196 IGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQ 255

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A++ +R +    ++P  V +  LI GFC+NG +++A ++ D +   G     VTY T +N
Sbjct: 256 ALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILN 315

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+E  +     L  EM  + + P   T+T +I G  K   + +AV L E M    + P
Sbjct: 316 GLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKP 375

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D +TYNT+I  FCK  ++ K  +L N M    + P   +Y ILI+G C  G +  A  L 
Sbjct: 376 DVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLW 435

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTK- 593
             + E     T +   TI+K +C  G+  KA  F   M+ KG       +   I  + K 
Sbjct: 436 DEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKE 495

Query: 594 -------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                  +    M ++G  PD     V+L  F + G +     +   MI+ G+ PD+
Sbjct: 496 ENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 552



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 150/313 (47%), Gaps = 22/313 (7%)

Query: 332 DSLIMS--NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
           +SL+++  NC  + +++++++  YV+   + E  + +R L  K +  SI   NSL+ G  
Sbjct: 14  ESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLV 73

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K G V  A  +   +   G++ +  T    +NA C+   I+   + L +ME K + P  V
Sbjct: 74  KVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVV 133

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY  +I   C+Q  L+EA +L++ M   G+ P   TYN II   CK     +A  +L++M
Sbjct: 134 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 193

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               + P +ATYNIL+   C N ++ +A+ +   +    +    V+++ +I      G +
Sbjct: 194 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 253

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
            +A+ +F            RD        M + G  PD  I  +++  F + G +    +
Sbjct: 254 DQALKYF------------RD--------MKNAGLAPDNVIYTILIGGFCRNGVMSEALK 293

Query: 630 LAAVMIKSGLLPD 642
           +   M++ G + D
Sbjct: 294 VRDEMLEQGCVLD 306


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 165/587 (28%), Positives = 295/587 (50%), Gaps = 38/587 (6%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVS 57
           +L   Y +   + +       +K   L VSI   NSLL  L      D+ W++Y ++  S
Sbjct: 189 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 248

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NVYT +I+I+ LC+  ++                                   E  
Sbjct: 249 GVQVNVYTLNIMINALCKNQKI-----------------------------------ENT 273

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           K     M + G+ PD  +YN LI+  C  G +EEA E  + M   G++P   TY+ +  G
Sbjct: 274 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 333

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                +   A  V+ ++L  G  PD  TY +L+   C+  N+ +  ++ + M SQG   +
Sbjct: 334 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 393

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           ++++S L+  + K+G +D+AL    +M+  GL PD V Y+ILI G C+   + +A+++ +
Sbjct: 394 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 453

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  +    +   +  IL GLC+++M++EA   F  +       D   +  +I+GY K G
Sbjct: 454 EMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDG 513

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N+ +AV L+  +I++ + P +VT+N+LI GFCK  ++     L + +    + P+ ++Y 
Sbjct: 514 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYG 573

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N YC  G +     L  EM  K    T +T   ++KG C+     +A + L +M + 
Sbjct: 574 ILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK 633

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD ITYNT+I  F K +++ +AF L+N+M    L P   TYN++++G    G ++ A
Sbjct: 634 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 693

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           + +++ + E  ++  +  YT++I  H  + ++ +A     +M+++GF
Sbjct: 694 ELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 740



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 146/585 (24%), Positives = 287/585 (49%), Gaps = 24/585 (4%)

Query: 62  NVYTNSIVIDGLC----QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           N  +N +V D L     Q  +L++     +    K    S+ + N+++    K+G+ ++A
Sbjct: 179 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 238

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             ++  +++ G+  + ++ NI+I+ LC    +E    F +DM   GV PD +TY+ L   
Sbjct: 239 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 298

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +     +  A++++  +  KG  P + TY  +I G C+ G       + + ML  G   +
Sbjct: 299 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 358

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              Y++LL   C++  + +A  +  EM + G+ PDLV++S LI  L K   + +A++ + 
Sbjct: 359 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 418

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M +  ++P++  +  ++ G C   +++EA    D ++   C+ DVV YN +++G  K  
Sbjct: 419 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 478

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EA +L+ ++ E+ + P   TF +LI G+ K+G +  A  L + +    L+P  VTY 
Sbjct: 479 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYN 538

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T ++ +C+   ++++  L  +M ++ I P H++Y ++I G C    + EA +L ++M   
Sbjct: 539 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 598

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G     IT NTI++ +C+  +  KA + L+ M L  + P   TYN LI+G     ++  A
Sbjct: 599 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 658

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             L+  ++   +    + Y  I+     +G + +A     +M+E+G              
Sbjct: 659 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVN------------ 706

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                   PD+     ++       +L   F +   M++ G +PD
Sbjct: 707 --------PDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 241/498 (48%), Gaps = 17/498 (3%)

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
           G  G  P  + + +L + +    ++    +  + L  KG    I     L+ G  ++G V
Sbjct: 178 GNCGSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWV 235

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           +   ++ + ++  G ++NV   +++++++CK+ +I+     L +ME  G+ PD+VTY+ L
Sbjct: 236 DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 295

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I   C+Q  + +A +L + M  K + P  F + AI+ GLC+      A+   D ++    
Sbjct: 296 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 355

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             D   YNI++    +  N+ +A +++ ++  + + P +V+F++LI    KNG +  A +
Sbjct: 356 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 415

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
               +K  GL P  V YT  +  +C  G +   L +  EM  +      VTY  ++ GLC
Sbjct: 416 YFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLC 475

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K+  L EA +L  +M   GV PD  T+ T+I  + K  ++ KA  L   M   NL+P   
Sbjct: 476 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 535

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYN LIDG C   +++  + L   +    I    ++Y  +I  +C  G V +A   + +M
Sbjct: 536 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 595

Query: 580 VEKGFEISI-------RDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
           VEKGFE +I       + Y ++        F   ML  G  PD      ++  F +  ++
Sbjct: 596 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 655

Query: 625 GSVFELAAVMIKSGLLPD 642
              F L   M  SGLLPD
Sbjct: 656 DRAFALVNKMENSGLLPD 673



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 144/537 (26%), Positives = 252/537 (46%), Gaps = 16/537 (2%)

Query: 123 LMLKYG-LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
           L+L YG    +   +++L+     A  + E  E    +   G+       + L  G   +
Sbjct: 173 LVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKV 232

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  AW++ Q+++  G   ++ T  ++I   C+   +E        M  +G   +V+ Y
Sbjct: 233 GWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY 292

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+++ C+ G ++EA  L+  M   GLKP + TY+ +I GLCK  K  +A  + +EM  
Sbjct: 293 NTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK 352

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +SP++  +  +L+  C  + + +A   FD +     + D+V ++ +I    K G + +
Sbjct: 353 IGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQ 412

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A++ +R +    ++P  V +  LI GFC+NG +++A ++ D +   G     VTY T +N
Sbjct: 413 ALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILN 472

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+E  +     L  EM  + + P   T+T +I G  K   + +AV L E M    + P
Sbjct: 473 GLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKP 532

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D +TYNT+I  FCK  ++ K  +L N M    + P   +Y ILI+G C  G +  A  L 
Sbjct: 533 DVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLW 592

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTK- 593
             + E     T +   TI+K +C  G+  KA  F   M+ KG       +   I  + K 
Sbjct: 593 DEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKE 652

Query: 594 -------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                  +    M ++G  PD     V+L  F + G +     +   MI+ G+ PD+
Sbjct: 653 ENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 709



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 159/332 (47%), Gaps = 23/332 (6%)

Query: 313 AILLGLCEKEMITEARMYFDSLIMS--NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           A++L +  K  ++   +  +SL+++  NC  + +++++++  YV+   + E  + +R L 
Sbjct: 153 AVILRMVRKSGVSRVEI-VESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLK 211

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            K +  SI   NSL+ G  K G V  A  +   +   G++ +  T    +NA C+   I+
Sbjct: 212 SKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIE 271

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
              + L +ME K + P  VTY  +I   C+Q  L+EA +L++ M   G+ P   TYN II
Sbjct: 272 NTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAII 331

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CK     +A  +L++M    + P +ATYNIL+   C N ++ +A+ +   +    + 
Sbjct: 332 NGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVV 391

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEI 610
              V+++ +I      G + +A+ +F            RD        M + G  PD  I
Sbjct: 392 PDLVSFSALIGLLSKNGCLDQALKYF------------RD--------MKNAGLAPDNVI 431

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             +++  F + G +    ++   M++ G + D
Sbjct: 432 YTILIGGFCRNGVMSEALKVRDEMLEQGCVLD 463


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 171/600 (28%), Positives = 303/600 (50%), Gaps = 5/600 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           Y R G + +AV V  +M   + + S+Q+YN++   L   R+ D    +Y  ++      +
Sbjct: 86  YGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPD 145

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT +I +   C+ SR   A   L     +    S V+   ++  + +      A  LF 
Sbjct: 146 VYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFE 205

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML  G+ PD  ++N LIH LC  G ++E+    N + + GV P+  T +I  +GF   +
Sbjct: 206 EMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRA 265

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            ++ A +++  +  +G  PD++TY  LICG C+   V E       M+++G++ +   Y+
Sbjct: 266 MLNEAIRLLDGVG-RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYN 324

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++   CK G +  A  +L +    G  PD  TY  LI GLC+   + +AI ++NE   K
Sbjct: 325 SIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEK 384

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN      ++ GL ++ +I +A    + +  + C  D+  YN++I+G  K+G + +A
Sbjct: 385 GLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDA 444

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L    I K   P + TFN+LI G+CK  K+ +A  ++D +  HG+ P  +TY + +N 
Sbjct: 445 DNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNG 504

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+ G  + ++   + M  K   P  +TY ++ +  CK  K++EA+ L+E+M   G+TPD
Sbjct: 505 LCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPD 564

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQM-WLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
            + + T+++ FC   DL  A+QL  ++   +    T ATYNI+I+      ++  A+ L 
Sbjct: 565 VVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLF 624

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
             + E+  S     Y  +I   C  G+++   +F    +EKG   S+  + +   C+ L 
Sbjct: 625 NKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLK 684



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 157/583 (26%), Positives = 277/583 (47%), Gaps = 17/583 (2%)

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           ++ ++Q+A+   +        PSV S NAIM+   +  + + A  ++  M   G+ PD +
Sbjct: 88  RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVY 147

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           ++ I +   C       A    N+M   G E  A+ Y  +  GF+  +    A ++ +++
Sbjct: 148 TFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM 207

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           L  G  PDI+ +  LI   C+ G+V+E  +L   +L +G   N+   ++ +   C+   +
Sbjct: 208 LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAML 267

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           +EA+ LL +    GL PD++TY+ LI GLCK  KV +A     +M ++   P+ F + +I
Sbjct: 268 NEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSI 326

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G C+  M+  A            + D   Y  +I+G  + G+I  A+ ++ + +EK +
Sbjct: 327 IDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGL 386

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P++V  N+L+ G  + G +  A +L++ +  +G  P   TY   +N  C+ G +     
Sbjct: 387 KPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADN 446

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L+ +   K   P   T+  +I G CK+ KL  A+++++ M+  GV+PD ITYN+I+   C
Sbjct: 447 LVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLC 506

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K             M      P   TYNIL +  C    ++ A  L+  +Q   ++   V
Sbjct: 507 KAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVV 566

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEK-GFEISIRDYT---------------KSFFCM 598
            + T++K  C  GD+  A   F ++ E+  F  +I  Y                +  F  
Sbjct: 567 NFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNK 626

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           M  NGF PD     VM+  F + G++ S +    V I+ GL+P
Sbjct: 627 MCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIP 669



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 144/538 (26%), Positives = 247/538 (45%), Gaps = 45/538 (8%)

Query: 30  SIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
            I  +N L++ L    H      L + +       N++T +I I G CQ++ L +AI  L
Sbjct: 215 DIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLL 274

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            +  G+   P V++ N ++   CK      A+     M+  G  PD F+YN +I G C  
Sbjct: 275 -DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKL 333

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G M+ A +   D    G  PD  TY  L  G      I  A  V  + + KG  P++V  
Sbjct: 334 GMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLC 393

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             L+ G  Q G + + LKL   M   G   ++  Y+++++ +CK G + +A  L+ +  A
Sbjct: 394 NTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIA 453

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G  PD+ T++ LI G CK+ K+  AI++ + M +  +SP+   + +IL GLC+     +
Sbjct: 454 KGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYED 513

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
               F  ++   C+ +++ YNI+ + + K   + EA+ L  ++  K ++P +V F +L+ 
Sbjct: 514 VMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMK 573

Query: 387 GFCKNG---------KVAD---------------------------ARRLLDTIKLHGLE 410
           GFC NG         K  D                           A +L + +  +G  
Sbjct: 574 GFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFS 633

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P + TY   ++ +C+ GNI    + L     K + P+  T+  V+  LC + ++ EAV +
Sbjct: 634 PDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGI 693

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +  M   G+ P+ +  NTI   F   K    A +++ +  +     T   Y IL DG+
Sbjct: 694 IHLMVHKGIVPEVV--NTI---FEADKKEVAAPKIVVENLMKKGHITYFAYEILHDGI 746



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 183/420 (43%), Gaps = 65/420 (15%)

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK-RISPNSFAHGAILLGLCE----KE 322
           G K  L+TY    +G+ ++   H   +   E+ ++ R++ ++     + +G       K 
Sbjct: 35  GFKHTLLTY----KGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIGAMRNYGRKG 90

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            I EA   F+ +   NC   V  YN +++  V+     +A ++Y ++ +K I P + TF 
Sbjct: 91  KIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFT 150

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY------------------- 423
             +  FC+  +   ARRLL+ +   G E SAV Y T +  +                   
Sbjct: 151 IRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGL 210

Query: 424 ----------------CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
                           C +G++Q    LL ++  + + P   T  + I+G C++  L EA
Sbjct: 211 GICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEA 270

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           ++LL D    G+TPD ITYNT+I   CK   + +A   L +M     EP   TYN +IDG
Sbjct: 271 IRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDG 329

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
            C  G ++NAD +L           +  Y ++I   C +GD+ +A+  F + +EKG +  
Sbjct: 330 YCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLK-- 387

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                             P+  +C  ++    Q G +    +L   M ++G  PD +  N
Sbjct: 388 ------------------PNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYN 429



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 148/305 (48%), Gaps = 6/305 (1%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRN 62
           S+ G++  A+ ++ +M E      I TYN ++  L     + D    + D I     P +
Sbjct: 401 SQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLP-D 459

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+T + +IDG C++ +L +AI  +         P V++ N+I++  CK G  E   G F 
Sbjct: 460 VFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFK 519

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           LM++ G  P+  +YNIL    C A  +EEAL    +M   G+ PD + +  L KGF    
Sbjct: 520 LMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNG 579

Query: 183 QISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            + GA+++ +++  +      I TY ++I  +    N+    KL   M   GF  +   Y
Sbjct: 580 DLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTY 639

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            V++   CK+G I+     L      GL P L T+  ++  LC + +VH+A+ + + M  
Sbjct: 640 RVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVH 699

Query: 302 KRISP 306
           K I P
Sbjct: 700 KGIVP 704



 Score = 45.4 bits (106), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 73/190 (38%), Gaps = 1/190 (0%)

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK-AIGPTHVTYTVVIKGLCKQWK 463
           K  G + + +TY   +      G  + +  +L E       G     Y   ++   ++ K
Sbjct: 32  KEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIGAMRNYGRKGK 91

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           +QEAV + E M      P   +YN I+    + +   +A ++  +M    + P   T+ I
Sbjct: 92  IQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTI 151

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +   C       A  LL ++       + VAY T+I     E    +A   F +M+  G
Sbjct: 152 RMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLG 211

Query: 584 FEISIRDYTK 593
               I  + K
Sbjct: 212 ICPDIMAFNK 221


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 267/498 (53%), Gaps = 2/498 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+ S N ++     +G     +  F L++  G  PD F++N  +     AG ++EAL  
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 156 TNDMGRH--GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
              MGR      PDA +Y+++  G     + S A KV  +++ +G  P+ +TY  +I G+
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
            + G++E G +LR+ ML  G K NV+ Y+VLLS +C++GR+DE   L+ EM +  + PD 
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            TYSIL  GL +       + L+ E   K +   ++    +L GLC+   + +A    + 
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L+ +  +    +YN +I+GY ++ ++  A  ++ Q+  + I P  +T+N+LI G CK   
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEM 420

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + +A  L+  ++  G++PS  T+ T ++AY   G +++   +L +M+ K I    +++  
Sbjct: 421 ITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGS 480

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           V+K  CK  K+ EAV +L+DM    V P+   YN+II ++ +     +AF L+ +M    
Sbjct: 481 VVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSG 540

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           +  +  TYN+L+ GLC N  +  A+ L+ +L    +    V+Y TII A C +GD  +A+
Sbjct: 541 VSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRAL 600

Query: 574 TFFCQMVEKGFEISIRDY 591
               +M +     ++R Y
Sbjct: 601 ELLQEMHKYDIRPTLRTY 618



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 247/479 (51%), Gaps = 35/479 (7%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PDAFSYN++I GL  +G   +AL+  ++M   GV P+ ITY+ +  G      +   +++
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRL 252

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE-----VMLSQGFKLNVI------ 239
             ++L  G  P++VTY VL+ G C+ G ++E   L +      ML  GF  +++      
Sbjct: 253 RDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR 312

Query: 240 ----------------------AY--SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
                                 AY  S+LL+ +CK G++ +A  +L  +   GL P    
Sbjct: 313 TGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAI 372

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G C+   +  A  ++ +M S+ I P+   + A++ GLC+ EMITEA      + 
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            S     V  +N +ID Y + G + +   +   + +K I  ++++F S++  FCKNGK+ 
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  +LD +    + P+A  Y + ++AY E G  ++   L+++M++  +  +  TY +++
Sbjct: 493 EAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLL 552

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           KGLCK  ++ EA +L+ ++   G+ PD ++YNTII + C   D  +A +LL +M  +++ 
Sbjct: 553 KGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIR 612

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
           PT  TY+ L+  L   G + + +CL   +   N+  +   Y T  +       + K M+
Sbjct: 613 PTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGTRCENESKVASLKKEMS 671



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 227/477 (47%), Gaps = 35/477 (7%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P + ++ ++VI GL +  +  DA+    E   +   P+ ++ N ++  + K G  E    
Sbjct: 192 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFR 251

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   ML+ G  P+  +YN+L+ GLC AG M+E     ++M  + + PD  TYSIL  G  
Sbjct: 252 LRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLT 311

Query: 180 -------LLS----------------------------QISGAWKVIQKLLIKGSDPDIV 204
                  +LS                            +++ A +V++ L+  G  P   
Sbjct: 312 RTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTA 371

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            Y  LI GYCQ+ +++    + E M S+  + + I Y+ L++ +CK   I EA  L+ EM
Sbjct: 372 IYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEM 431

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           E  G+ P + T++ LI    +  ++ K   + ++M  K I  N  + G+++   C+   I
Sbjct: 432 EKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKI 491

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            EA    D +I  + + +  +YN +ID Y++ G   +A  L  ++    +S SI T+N L
Sbjct: 492 PEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLL 551

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           + G CKN ++ +A  L+  +   GL P  V+Y T ++A C +G+  R L LLQEM    I
Sbjct: 552 LKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDI 611

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
            PT  TY  ++  L    ++ +   L + M    V P    Y T   +  K   L+K
Sbjct: 612 RPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGTRCENESKVASLKK 668



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 122/274 (44%), Gaps = 22/274 (8%)

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           PS+ + N L+      G+ AD R     +   G  P    +   + A    G++   LA+
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 436 LQEM--ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           L+ M     A  P   +Y VVI GL +  K  +A+++ ++M   GV P+QITYNT+I   
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
            K  DL   F+L +QM     +P   TYN+L+ GLC  G +     L+  +  +++    
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
             Y+ +       GD    ++ F + ++KG  I       ++ C +L NG   D      
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIG------AYTCSILLNGLCKD------ 348

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                   G +    ++  +++ +GL+P   + N
Sbjct: 349 --------GKVAKAEQVLEMLVHTGLVPTTAIYN 374



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 3/170 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPR 61
            + + G + +AV ++  M   D+  + Q YNS++        T+  + L + +K S    
Sbjct: 484 AFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSA 543

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +++T ++++ GLC+ S++ +A   +     +   P VVS N I+S  C  G  + A  L 
Sbjct: 544 SIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELL 603

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
             M KY + P   +Y+ L+  L  AG + +       M    VEP +  Y
Sbjct: 604 QEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY 653


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 168/597 (28%), Positives = 300/597 (50%), Gaps = 4/597 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRN 62
           Y R G V +AV V  +M   + + S+ +YN+++  L  +        ++  +K      +
Sbjct: 86  YGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPD 145

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT +I I   C+  R   A+  L     +    + V+   +++ + +  +   A  LF 
Sbjct: 146 VYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFN 205

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML+ G+ PD  ++N L+H LC  G ++E+    N + + G+  +  T++I  +G     
Sbjct: 206 DMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKG 265

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +SGA  ++  ++ +G  PD+VTY  LICG C+  NV E  K    +++ G + +   Y+
Sbjct: 266 MLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYN 325

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   CK G +  A  +L      G  PD  TY  LI GLC+ D++ +A+ L+N    K
Sbjct: 326 TLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGK 385

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P    +  ++ GLC++ +I +A    + +  + C  D+  YN++I+G  K+G + +A
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L    I K   P + TFN+LI G+CK  K+    ++L+ +  HG+ P  +TY + +N 
Sbjct: 446 NNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNG 505

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
             +    + L+   + M  K   P  +TY ++ + LCK  K+ EA+ L++++   G+TPD
Sbjct: 506 LSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPD 565

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMW-LHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
            +++ TII  F    DL+ A+QL  +M   + +  T+ATYNI+I+      DL   + L 
Sbjct: 566 TVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLF 625

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
           + +     +     Y  +I   C  G+      F  +M+EKGF  S+  + +   C+
Sbjct: 626 LEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCL 682



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 154/583 (26%), Positives = 272/583 (46%), Gaps = 16/583 (2%)

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           ++ ++Q+A+   +        PSV+S NAIM+   + G+ + A  +F  M   G+ PD +
Sbjct: 88  RKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVY 147

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           ++ I I   C       AL   N+M   G + +A+ Y  +  GF+  +    A+++   +
Sbjct: 148 TFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDM 207

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           L  G  PD+ T+  L+   C+ G V+E  +L   +L +G   N+  +++ +  +C+ G +
Sbjct: 208 LRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGML 267

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
             A+ +L  +   GL PD+VTY+ LI GLCK   V +A +  +++ +  + P+ F +  +
Sbjct: 268 SGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTL 327

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G C+  M+  A       I    + D   Y  +I+G  +   I  A+ L+   + K +
Sbjct: 328 IDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGL 387

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P+++ +N LI G C+ G +  A ++++ +  +G      TY   +N  C+ G +     
Sbjct: 388 KPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANN 447

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L+ +   K   P   T+  +I G CKQ K++  +Q+L  M+  GVTPD ITYN+++    
Sbjct: 448 LMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLS 507

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K        +    M      P   TYNIL + LC  G +  A  L+  +    I+   V
Sbjct: 508 KAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTV 567

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEK--------GFEISIRDYTKSF--------FCM 598
           ++ TII      GD+  A   F +M E+         + I I  + +          F  
Sbjct: 568 SFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLE 627

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           M + G  PD     VM+  F   G+  S ++    MI+ G +P
Sbjct: 628 MGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIP 670



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/551 (25%), Positives = 259/551 (47%), Gaps = 41/551 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDD-IKVSETPR 61
           + RT   H A+ ++  M     +++   Y +++   Y   +    ++L++D +++   P 
Sbjct: 156 FCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFP- 214

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T + ++  LC++  +Q++   L +   K    ++ + N  +   C+ G    A  + 
Sbjct: 215 DVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSML 274

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +++ GL PD  +YN LI GLC   ++ EA ++ + +   G+EPD  TY+ L  G+  +
Sbjct: 275 DSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKM 334

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A K++Q  + KG  PD  TY  LI G CQ   ++  L L    L +G K  VI Y
Sbjct: 335 GMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILY 394

Query: 242 SVLLSSMCKSGRIDEALGLLYEME-----------------------------------A 266
           ++L+  +C+ G I +AL ++ EM                                    A
Sbjct: 395 NMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIA 454

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G  PD+ T++ LI G CKQ K+   IQ+ N+M S  ++P+   + ++L GL +     +
Sbjct: 455 KGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNED 514

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
               F++++   C+ + + YNI+ +   K G + EA+ L  +++ K I+P  V+F ++I 
Sbjct: 515 LMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIIS 574

Query: 387 GFCKNGKVADARRLLDTI-KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
           GF  NG +  A +L   + + + +  +  TY   +NA+ E+ ++     L  EM      
Sbjct: 575 GFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCA 634

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P   TY V+I G C         + L +M   G  P   T+  +I   C    + +A  +
Sbjct: 635 PDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDI 694

Query: 506 LNQMWLHNLEP 516
           ++ M  + + P
Sbjct: 695 IHFMVHNGIVP 705



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 230/515 (44%), Gaps = 64/515 (12%)

Query: 151 EALEFTNDMGRH-GVEPDAITYSILAK--GFH-----LLSQISGAWKVIQKLLIKGSDPD 202
           +ALE  N + R  G +   +TY  + +  GFH     + + ++     I   L++G    
Sbjct: 22  KALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEG---- 77

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
              Y   +  Y + G V+E + + E M     + +V++Y+ +++ + +SG   +A  +  
Sbjct: 78  --VYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFL 135

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
            M+ VG+ PD+ T++I I+  C+  + H A++L N M S+    N+ A+  ++ G  E+ 
Sbjct: 136 RMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEEN 195

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
                                  Y +            EA +L+  ++   I P + TFN
Sbjct: 196 -----------------------YRV------------EAYELFNDMLRIGIFPDVSTFN 220

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
            L++  CK G+V ++ RLL+ +   G+  +  T+  F+   C +G +   +++L  +  +
Sbjct: 221 KLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIRE 280

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P  VTY  +I GLCK   + EA + L  +   G+ PD  TYNT+I  +CK   L+ A
Sbjct: 281 GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNA 340

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            ++L         P   TY  LI+GLC N ++  A  L  +     +  T + Y  +IK 
Sbjct: 341 EKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKG 400

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCMM-------------LSNGFPPD 607
            C EG + +A+    +M E G    I  Y    +  C M             ++ G+ PD
Sbjct: 401 LCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPD 460

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                 ++  + +   + +  ++   M   G+ PD
Sbjct: 461 VFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPD 495



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 143/308 (46%), Gaps = 41/308 (13%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNV 63
           + G++  A+ ++ +M E      I TYN ++  L     + D    + D I     P +V
Sbjct: 403 QEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVP-DV 461

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T + +IDG C+Q +++  I  L +       P V++ N++++   K    E     F  
Sbjct: 462 FTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFET 521

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M++ G  P+  +YNIL   LC AG + EAL+  +++   G+ PD ++++ +  GF     
Sbjct: 522 MVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGD 581

Query: 184 ISGAWKVI--------------------------------QKLLIK----GSDPDIVTYT 207
           + GA+++                                 +KL ++    G  PD  TY 
Sbjct: 582 LKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYR 641

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           V+I G+C  GN + G K    M+ +GF  ++  +  +++ +C   R+ EA+ +++ M   
Sbjct: 642 VMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHN 701

Query: 268 GLKPDLVT 275
           G+ P++V 
Sbjct: 702 GIVPEVVN 709


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 179/631 (28%), Positives = 316/631 (50%), Gaps = 75/631 (11%)

Query: 30  SIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           S+  YN++L  L    +      L   ++    P NVYT +I++  LC + RL++A+  +
Sbjct: 117 SVPAYNAVLLALSDASLPSARRFLSSMLRHGVAP-NVYTYNILVRALCARGRLEEAVGVV 175

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LHPDAFSYNILIHGLCI 145
            +  G    P+ V+ N +++ +C+ G  + A+ +  LM + G   P+  ++N +++GLC 
Sbjct: 176 GDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCK 235

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
           AG ME A +  ++M R G+ PD ++Y+ L  G+  +  +  +  V  ++  +G  PD+VT
Sbjct: 236 AGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVT 295

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           +T LI   C+ GN+E+ + L   M  +G ++N + ++ L+   CK G +D+AL  + EM 
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR 355

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G++P +V Y+ LI G CK  ++  A +L  EM +KR+ P                   
Sbjct: 356 KCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP------------------- 396

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
                           DVV Y+ +I GY K+GN+  A QL +++++K + P  +T++SLI
Sbjct: 397 ----------------DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 440

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G C+  ++ DA  L + +   G++P   TYTT ++ +C+EGN+++ L+L  EM  K + 
Sbjct: 441 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 500

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  VTY+V+I GL K  + +EA +LL  +Y     PD I Y+ ++   C   + +    L
Sbjct: 501 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLC-CSKAEFKSVVAL 559

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           L                    G C+ G +K AD +  S+ + N  L    Y+ +I  HC 
Sbjct: 560 LK-------------------GFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCR 600

Query: 566 EGDVHKAMTFFCQMVEKGFEIS-------IRDYTKSFFCMMLSNGFP--------PDQEI 610
            G+V KA++F  QM+  GF  +       +R   +    +   N            D E 
Sbjct: 601 GGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEA 660

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            + ++    + G++ ++ ++   M + GLLP
Sbjct: 661 SKALIDLNRKEGNVDALIDVLCGMARDGLLP 691



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 242/486 (49%), Gaps = 23/486 (4%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLY------NLRHTDIMWDLYDDIKVSETPRNV 63
           G + +AV V+  M+      +  TYN+L+        L   + +  L  + + +  P  V
Sbjct: 166 GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMRE-EGNAKPNLV 224

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             NS+V +GLC+  R++ A     E   +   P VVS N ++S YCK+G    +  +F  
Sbjct: 225 TFNSMV-NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE 283

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M + GL PD  ++  LIH  C AG++E+A+     M   G+  + +T++ L  GF     
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A   ++++   G  P +V Y  LI GYC++G ++   +L   M ++  K +V+ YS 
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++S  CK G +D A  L  +M   G+ PD +TYS LIRGLC++ +++ A +L+  M    
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P+ F +  ++ G C++  + +A    D +I    + DVV Y+++I+G  K     EA 
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 364 QLYRQLIEKRISPSIVTFN---------------SLIYGFCKNGKVADARRLLDTIKLHG 408
           +L  +L  +   P  + ++               +L+ GFC  G + +A ++  ++    
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
            +     Y+  ++ +C  GN+++ L+  ++M      P   +   +++GL ++  + EA 
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643

Query: 469 QLLEDM 474
             ++D+
Sbjct: 644 NAIQDL 649



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 198/425 (46%), Gaps = 53/425 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           Y + G +H+++ V ++M +  L   + T+ SL++      + +    L   ++      N
Sbjct: 268 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 327

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +IDG C++  L DA+L ++E       PSVV  NA+++ YCKLG  ++A+ L  
Sbjct: 328 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR 387

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M    + PD  +Y+ +I G C  G+++ A +    M + GV PDAITYS L +G     
Sbjct: 388 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 447

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +++ A ++ + +L  G  PD  TYT LI G+C+ GNVE+ L L + M+ +G   +V+ YS
Sbjct: 448 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 507

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV---------------------------- 274
           VL++ + KS R  EA  LL+++      PD +                            
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567

Query: 275 ----------------------TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
                                  YSILI G C+   V KA+  + +M     SPNS +  
Sbjct: 568 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 627

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           +++ GL E+ M+ EA      L+    + D      +ID   K GN+   + +   +   
Sbjct: 628 SLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARD 687

Query: 373 RISPS 377
            + PS
Sbjct: 688 GLLPS 692


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  291 bits (746), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 193/668 (28%), Positives = 325/668 (48%), Gaps = 37/668 (5%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKV----SETPRNV 63
            + G + +A  V   M       ++ TYN+L+  L   D M   +  I+       TP +V
Sbjct: 372  KCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTP-DV 430

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             T S+++D  C+ SR+ +A+  L   A +   P+VV+ N+I+   CK   +  A  +F  
Sbjct: 431  ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDD 490

Query: 124  M-LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M LK+GL PD  +Y  LI GL   G   +A    + M     +PD   ++    G   L 
Sbjct: 491  MALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM----PDPDTYAFNCCINGLSKLG 546

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
             +S A +V  ++L     PD VT+ +LI G C+ GN E+   L E M+++  + +V+ + 
Sbjct: 547  DVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFG 606

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             L+  +CK+G+++ A  +L  M  +G+ P++VTY+ L+ GLCK  ++ +A Q   EM S 
Sbjct: 607  ALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSS 666

Query: 303  RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
               P+S  +G+++  LC      +A      L       D V YNI++DG  K G   +A
Sbjct: 667  GCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQA 726

Query: 363  VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL---LDTIKLHGLEPSAVTYTTF 419
            + +  +++ K   P +VT+N+LI   CK G + +ARRL   + +       P+ VTY+  
Sbjct: 727  ITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVL 786

Query: 420  MNAYCEEGNIQRLLALLQEMETKA--IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY-- 475
            +N  C+ G I     L+QEM  K+  + P  +TY   + GLCKQ  + EA +L+  +   
Sbjct: 787  INGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDG 846

Query: 476  VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             + V+PD +T++T+I   CKC    +A  + + M      P   TYN+L++GLC    ++
Sbjct: 847  SLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKME 906

Query: 536  NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISI 588
             A  ++ S+ +  ++   + Y+ ++ A C    V +A+     M  +G       F   I
Sbjct: 907  RAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSII 966

Query: 589  RDYTKS---------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                KS         F  M L +G  PD+     ++    + G  G     A V++ +  
Sbjct: 967  DGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQ----AEVLLDAMP 1022

Query: 640  LPDKFLIN 647
             PD +  N
Sbjct: 1023 DPDTYAFN 1030



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 167/571 (29%), Positives = 292/571 (51%), Gaps = 12/571 (2%)

Query: 20  AKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVIDGLCQQ 76
            +M    +  +I TYN+++  L  ++ +    +L++++       +V T + +ID LC+ 
Sbjct: 205 GEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKA 264

Query: 77  SRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH--PDAF 134
             L++A     + + +   P+VV+ + +++  CK+G  + A+ L   M +      P+  
Sbjct: 265 GDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNII 324

Query: 135 SYNILIHGLCIAGSMEEALEFTNDM--GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
           +YN  + GLC      EA E    +  G   V PD +T+S L  G     QI  A  V  
Sbjct: 325 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 384

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
            ++  G  P+++TY  L+ G C+   +E    + E M+ +G   +VI YSVL+ + CK+ 
Sbjct: 385 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 444

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR-ISPNSFAH 311
           R+DEAL LL+ M + G  P++VT++ +I GLCK D+  +A Q++++M  K  + P+   +
Sbjct: 445 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITY 504

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++ GL       +A    D++       D   +N  I+G  KLG++  A+Q+Y +++E
Sbjct: 505 CTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCINGLSKLGDVSRALQVYNRMLE 560

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
             + P  VTFN LI G CK G    A  L + +    L+P  +T+   ++  C+ G ++ 
Sbjct: 561 LELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEA 620

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              +L  M    + P  VTY  ++ GLCK  +++EA Q LE+M   G  PD ITY +++ 
Sbjct: 621 ARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVY 680

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
           + C+      A QL++++     +P + TYNIL+DGL  +G  + A  +L  +       
Sbjct: 681 ALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHP 740

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
             V Y T+I + C  GD+ +A      M  +
Sbjct: 741 DVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 771



 Score =  281 bits (720), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 176/581 (30%), Positives = 286/581 (49%), Gaps = 53/581 (9%)

Query: 26   DLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILF 85
            D+  ++Q YN +L                ++   P  V  N I+I G C+    + A   
Sbjct: 547  DVSRALQVYNRML----------------ELELVPDKVTFN-ILIAGACKAGNFEQASAL 589

Query: 86   LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
             +E   K   P V++  A++   CK G  E A+ +  LM   G+ P+  +YN L+HGLC 
Sbjct: 590  FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 649

Query: 146  AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
            +G +EEA +F  +M   G  PD+ITY  L       S+   A +++ +L   G DPD VT
Sbjct: 650  SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 709

Query: 206  YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
            Y +L+ G  + G  E+ + + E M+ +G   +V+ Y+ L+ S+CK+G ++EA  L  +M 
Sbjct: 710  YNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 769

Query: 266  AVGLK---PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR--ISPNSFAHGAILLGLCE 320
            +   +   P++VTYS+LI GLCK  ++ +A +L  EM  K   + PN   + + L GLC+
Sbjct: 770  SRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCK 829

Query: 321  KEMITEARMYFDSLIMSN--CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
            + M+ EA     SL   +     D V ++ +IDG  K G   EA  ++  +I     P++
Sbjct: 830  QSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNV 889

Query: 379  VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            VT+N L+ G CK  K+  A  +++++   G+ P  +TY+  ++A+C+  ++   L LL  
Sbjct: 890  VTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHG 949

Query: 439  METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI-GVTPDQITYNTIIRSFCKCK 497
            M ++   P  VT+  +I GLCK  +  EA Q+ +DM +  G+ PD+ITY T+I    +  
Sbjct: 950  MASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTG 1009

Query: 498  DLRKAFQLLNQM-----------------------WLHN-----LEPTSATYNILIDGLC 529
               +A  LL+ M                        LH      L P   T+NILI G C
Sbjct: 1010 WAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGAC 1069

Query: 530  VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              G+ + A  L   +   N+    + +  +I   C  G V 
Sbjct: 1070 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 171/575 (29%), Positives = 283/575 (49%), Gaps = 53/575 (9%)

Query: 7    SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNV 63
            S+ G V  A+ V  +M EL+L     T+N L+       + +    L++++       +V
Sbjct: 543  SKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 602

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             T   +IDGLC+  +++ A   L         P+VV+ NA++   CK G  E A      
Sbjct: 603  MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 662

Query: 124  MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
            M+  G  PD+ +Y  L++ LC A   ++AL+  +++   G +PD +TY+IL  G     Q
Sbjct: 663  MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQ 722

Query: 184  ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL---NVIA 240
               A  V+++++ KG  PD+VTY  LI   C+ G++EE  +L   M S+  +    NV+ 
Sbjct: 723  TEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVT 782

Query: 241  YSVLLSSMCKSGRIDEALGLLYEM----------------------------EAVGL--- 269
            YSVL++ +CK GRIDEA  L+ EM                            EA  L   
Sbjct: 783  YSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRS 842

Query: 270  --------KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
                     PD VT+S LI GLCK  +  +A  ++++M +    PN   +  ++ GLC+ 
Sbjct: 843  LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKT 902

Query: 322  EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
            + +  A    +S++      DV+ Y++++D + K  ++ EA++L   +  +  +P++VTF
Sbjct: 903  DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTF 962

Query: 382  NSLIYGFCKNGKVADARRLLDTIKL-HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
            NS+I G CK+ +  +A ++ D + L HGL P  +TY T ++     G   +   LL  M 
Sbjct: 963  NSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP 1022

Query: 441  TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
                 P    +   I GL    KL +  + L  M  + + PD++T+N +I   CK  +  
Sbjct: 1023 D----PDTYAFNCCINGL---SKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFE 1075

Query: 501  KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            +A  L  +M   NL+P   T+  LIDGLC  G ++
Sbjct: 1076 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 158/568 (27%), Positives = 263/568 (46%), Gaps = 60/568 (10%)

Query: 136 YNILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           YNI++  LC AG    ALE F  +M R GV P  +TY+ +  G    +++    ++ ++L
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           + +G  PD+VTY  LI   C+ G++EE  +L   M S+    NV+ YSVL++ +CK GRI
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302

Query: 255 DEALGLLYEME---------------------------------------AVGLKPDLVT 275
           DEA  L+ EM                                        ++ + PD VT
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 362

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           +S LI GLCK  ++ +A  ++++M +    PN   + A++ GLC+ + +  A    +S++
Sbjct: 363 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 422

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 DV+ Y++++D + K   + EA++L   +  +  +P++VTFNS+I G CK+ +  
Sbjct: 423 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 482

Query: 396 DARRLLDTIKL-HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
           +A ++ D + L HGL P  +TY T ++     G   +  ALL  M      P    +   
Sbjct: 483 EAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCC 538

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I GL K   +  A+Q+   M  + + PD++T+N +I   CK  +  +A  L  +M   NL
Sbjct: 539 INGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 598

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
           +P   T+  LIDGLC  G ++ A  +L  +    +    V Y  ++   C  G + +A  
Sbjct: 599 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 658

Query: 575 FFCQMVEKG---------------FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
           F  +MV  G                  S  D        + S G+ PD     +++    
Sbjct: 659 FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW 718

Query: 620 QGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           + G       +   M+  G  PD    N
Sbjct: 719 KSGQTEQAITVLEEMVGKGHHPDVVTYN 746



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 153/566 (27%), Positives = 264/566 (46%), Gaps = 59/566 (10%)

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK-------------GFH- 179
           FS+N  ++ L  +GS  +A++           P+  TYS L +             GF  
Sbjct: 112 FSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFR 171

Query: 180 --------------LLSQISGAWKVIQKLLI-------KGSDPDIVTYTVLICGYCQIGN 218
                         +L  +  A +  + L I        G  P IVTY  +I G C+   
Sbjct: 172 RIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNE 231

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           +  G++L E ++ +G   +V+ Y+ L+ S+CK+G ++EA  L  +M +    P++VTYS+
Sbjct: 232 LGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSV 291

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKR--ISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           LI GLCK  ++ +A +L  EM  K   + PN   + + L GLC++ M  EA     SL  
Sbjct: 292 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 351

Query: 337 SN--CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
            +     D V ++ +IDG  K G I EA  ++  +I     P+++T+N+L+ G CK  K+
Sbjct: 352 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 411

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
             A  +++++   G+ P  +TY+  ++A+C+   +   L LL  M ++   P  VT+  +
Sbjct: 412 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI 471

Query: 455 IKGLCKQWKLQEAVQLLEDMYVI-GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           I GLCK  +  EA Q+ +DM +  G+ PD+ITY T+I    +     +A  LL+ M    
Sbjct: 472 IDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP--- 528

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
            +P +  +N  I+GL   GD+  A  +   + E  +   KV +  +I   C  G+  +A 
Sbjct: 529 -DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQAS 587

Query: 574 TFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAF 618
             F +MV K  +  +  +                +    +M + G PP+      ++   
Sbjct: 588 ALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGL 647

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDKF 644
            + G +    +    M+ SG +PD  
Sbjct: 648 CKSGRIEEACQFLEEMVSSGCVPDSI 673



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 232/473 (49%), Gaps = 49/473 (10%)

Query: 2    LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
            L +   R     DA+ +++++K         TYN                          
Sbjct: 678  LVYALCRASRTDDALQLVSELKSFGWDPDTVTYN-------------------------- 711

Query: 62   NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
                  I++DGL +  + + AI  L+E  GK   P VV+ N ++   CK G  E A+ L 
Sbjct: 712  ------ILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLH 765

Query: 122  CLM---LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE--PDAITYSILAK 176
              M   +     P+  +Y++LI+GLC  G ++EA E   +M R   +  P+ ITY+    
Sbjct: 766  GDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLD 825

Query: 177  GFHLLSQISGAWKVIQKLLIKGS---DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
            G    S ++ A ++++ L   GS    PD VT++ LI G C+ G  +E   + + M++ G
Sbjct: 826  GLCKQSMMAEACELMRSLR-DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGG 884

Query: 234  FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            +  NV+ Y+VL++ +CK+ +++ A  ++  M   G+ PD++TYS+L+   CK   V +A+
Sbjct: 885  YVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEAL 944

Query: 294  QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-QDVVLYNIMIDG 352
            +L + M S+  +PN     +I+ GLC+ +   EA   FD + + + +  D + Y  +IDG
Sbjct: 945  ELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDG 1004

Query: 353  YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
              + G  G+A      L++    P    FN  I G  K G V  +R L   ++L  L P 
Sbjct: 1005 LFRTGWAGQA----EVLLDAMPDPDTYAFNCCINGLSKLGDV--SRALHRMLELE-LVPD 1057

Query: 413  AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             VT+   +   C+ GN ++  AL +EM  K + P  +T+  +I GLCK  +++
Sbjct: 1058 KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 203/454 (44%), Gaps = 29/454 (6%)

Query: 217 GNVEEGLKLREVMLS-QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           GN E G +  +   +  GFK  + +++  L+ + KSG   +A+ L         +P+  T
Sbjct: 89  GNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFT 148

Query: 276 YSILIRGLCKQ-DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA-RMYFDS 333
           YS L+R   K    V + +  +  + S   S   +    +L  LC       A  ++   
Sbjct: 149 YSTLLRATYKAGGDVERTLGFFRRIRSSSRSVADY--NIVLQSLCRAGETARALEIFRGE 206

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +        +V YN +I+G  K   +G  ++L+ +L+E+   P +VT+N+LI   CK G 
Sbjct: 207 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 266

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA--IGPTHVTY 451
           + +ARRL   +      P+ VTY+  +N  C+ G I     L+QEM  K+  + P  +TY
Sbjct: 267 LEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 326

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMY--VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
              + GLCKQ    EA +L+  +    + V+PD +T++T+I   CKC  + +A  + + M
Sbjct: 327 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDM 386

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
                 P   TYN L++GLC    ++ A  ++ S+ +  ++   + Y+ ++ A C    V
Sbjct: 387 IAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 446

Query: 570 HKAMTFFCQMVEKG-------FEISIRDYTKS---------FFCMMLSNGFPPDQEICEV 613
            +A+     M  +G       F   I    KS         F  M L +G  PD+     
Sbjct: 447 DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCT 506

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           ++    + G  G    L   M      PD +  N
Sbjct: 507 LIDGLFRTGRAGQAEALLDAMPD----PDTYAFN 536



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 13/196 (6%)

Query: 1    MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDIKVS 57
            +L   + +   V +A+ ++  M       ++ T+NS++  L  +D     + ++DD+ + 
Sbjct: 929  VLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLK 988

Query: 58   E--TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
                P  + T   +IDGL +      A + L         P   + N  ++   KLG  +
Sbjct: 989  HGLAPDKI-TYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFNCCINGLSKLG--D 1041

Query: 116  VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            V++ L   ML+  L PD  ++NILI G C AG+ E+A     +M    ++PD +T+  L 
Sbjct: 1042 VSRALH-RMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALI 1100

Query: 176  KGFHLLSQISGAWKVI 191
             G     Q+   W ++
Sbjct: 1101 DGLCKAGQVEATWDIM 1116


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  291 bits (745), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 162/524 (30%), Positives = 278/524 (53%), Gaps = 56/524 (10%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NVYT +I++  LC + RL++A+  + +  G    P+ V+ N +++ +C+ G  + A+ + 
Sbjct: 151 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 210

Query: 122 CLMLKYG-LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
            LM + G   P+  ++N +++GLC AG ME A +  ++M R G+ PD ++Y+ L  G+  
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 270

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +  +  +  V  ++  +G  PD+VT+T LI   C+ GN+E+ + L   M  +G ++N + 
Sbjct: 271 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 330

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++ L+   CK G +D+AL  + EM   G++P +V Y+ LI G CK  ++  A +L  EM 
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +KR+ P                                   DVV Y+ +I GY K+GN+ 
Sbjct: 391 AKRVKP-----------------------------------DVVTYSTIISGYCKVGNLD 415

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A QL +++++K + P  +T++SLI G C+  ++ DA  L + +   G++P   TYTT +
Sbjct: 416 SAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLI 475

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + +C+EGN+++ L+L  EM  K + P  VTY+V+I GL K  + +EA +LL  +Y     
Sbjct: 476 DGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPV 535

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD I Y+ ++   C   + +    LL                    G C+ G +K AD +
Sbjct: 536 PDNIKYDALMLC-CSKAEFKSVVALLK-------------------GFCMKGLMKEADKV 575

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             S+ + N  L    Y+ +I  HC  G+V KA++F  QM+  GF
Sbjct: 576 YQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGF 619



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 211/398 (53%), Gaps = 6/398 (1%)

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  P +  Y  ++       ++    +    ML  G   NV  Y++L+ ++C  GR++EA
Sbjct: 113 GYAPSVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQ---DKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           +G++ +M   G  P+ VTY+ L+   C+    D   + + L  E  + +  PN     ++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAK--PNLVTFNSM 229

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + GLC+   +  AR  FD ++      DVV YN ++ GY K+G + E++ ++ ++ ++ +
Sbjct: 230 VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P +VTF SLI+  CK G +  A  L+  ++  GL  + VT+T  ++ +C++G +   L 
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
            ++EM    I P+ V Y  +I G CK  ++  A +L+ +M    V PD +TY+TII  +C
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K  +L  AFQL  +M    + P + TY+ LI GLC    L +A  L  ++ +  +   + 
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            YTT+I  HC EG+V KA++   +M+ KG    +  Y+
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 507



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/542 (25%), Positives = 259/542 (47%), Gaps = 35/542 (6%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLY------NLRHTDIMWDLYDDIKVSETPRNV 63
           G + +AV V+  M+      +  TYN+L+        L   + +  L  + + +  P  V
Sbjct: 166 GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMRE-EGNAKPNLV 224

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             NS+V +GLC+  R++ A     E   +   P VVS N ++S YCK+G    +  +F  
Sbjct: 225 TFNSMV-NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE 283

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M + GL PD  ++  LIH  C AG++E+A+     M   G+  + +T++ L  GF     
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A   ++++   G  P +V Y  LI GYC++G ++   +L   M ++  K +V+ YS 
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++S  CK G +D A  L  +M   G+ PD +TYS LIRGLC++ +++ A +L+  M    
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P+ F +  ++ G C++  + +A    D +I    + DVV Y+++I+G  K     EA 
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 364 QLYRQLIEKRISPSIVTFN---------------SLIYGFCKNGKVADARRLLDTIKLHG 408
           +L  +L  +   P  + ++               +L+ GFC  G + +A ++  ++    
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
            +     Y+  ++ +C  GN+++ L+  ++M      P   +   +++GL ++  + EA 
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA-----FQLLNQMWLHNLEPTSATYNI 523
             ++D+       D      +I       DL +      FQ   ++W     P+   +N 
Sbjct: 644 NAIQDLLTCCPLADAEASKALI-------DLNRKEGMDYFQAQGEIWYSESSPSVEYWNY 696

Query: 524 LI 525
           ++
Sbjct: 697 MM 698



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 152/305 (49%), Gaps = 18/305 (5%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           + + G + DA+  + +M++  ++ S+  YN+L+     L   D+  +L  +++      +
Sbjct: 338 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 397

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T S +I G C+   L  A    Q+   K   P  ++ ++++   C+      A  LF 
Sbjct: 398 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 457

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML+ G+ PD F+Y  LI G C  G++E+AL   ++M R GV PD +TYS+L  G    +
Sbjct: 458 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVL-IC--------------GYCQIGNVEEGLKLRE 227
           +   A +++ KL  +   PD + Y  L +C              G+C  G ++E  K+ +
Sbjct: 518 RTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQ 577

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            ML + +KL+   YS+L+   C+ G + +AL    +M   G  P+  +   L+RGL ++ 
Sbjct: 578 SMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 637

Query: 288 KVHKA 292
            V +A
Sbjct: 638 MVVEA 642


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  291 bits (745), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 172/596 (28%), Positives = 303/596 (50%), Gaps = 71/596 (11%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NVYT +I++  LC + RL++A+  + +  G    P+ V+ N +++ +C+ G  + A+ + 
Sbjct: 9   NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 68

Query: 122 CLMLKYG-LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
            LM + G   P+  ++N +++GLC AG ME A +  ++M R G+ PD ++Y+ L  G+  
Sbjct: 69  SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 128

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +  +  +  V  ++  +G  PD+VT+T LI   C+ GN+E+ + L   M  +G ++N + 
Sbjct: 129 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 188

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++ L+   CK G +D+AL  + EM   G++P +V Y+ LI G CK  ++  A +L  EM 
Sbjct: 189 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 248

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +KR+ P                                   DVV Y+ +I GY K+GN+ 
Sbjct: 249 AKRVKP-----------------------------------DVVTYSTIISGYCKVGNLD 273

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A QL +++++K + P  +T++SLI G C+  ++ DA  L + +   G++P   TYTT +
Sbjct: 274 SAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLI 333

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + +C+EGN+++ L+L  EM  K + P  VTY+V+I GL K  + +EA +LL  +Y     
Sbjct: 334 DGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPV 393

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD I Y+ ++   C   + +    LL                    G C+ G +K AD +
Sbjct: 394 PDNIKYDALMLC-CSKAEFKSVVALLK-------------------GFCMKGLMKEADKV 433

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS-------IRDYTK 593
             S+ + N  L    Y+ +I  HC  G+V KA++F  QM+  GF  +       +R   +
Sbjct: 434 YQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFE 493

Query: 594 SFFCMMLSNGFP--------PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
               +   N            D E  + ++    + G++ ++ ++   M + GLLP
Sbjct: 494 EGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 549



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 259/490 (52%), Gaps = 16/490 (3%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M RHGV P+  TY+IL +      ++  A  V+  +   G  P+ VTY  L+  +C+ G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 219 VEEGLKLREVMLSQG-FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
           ++   ++  +M  +G  K N++ ++ +++ +CK+GR++ A  +  EM   GL PD+V+Y+
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPN-----SFAHGAILLGLCEKEMITEARMYFD 332
            L+ G CK   +H+++ +++EM  + + P+     S  H     G  E+ +   A+M   
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            L M+      V +  +IDG+ K G + +A+    ++ +  I PS+V +N+LI G+CK G
Sbjct: 181 GLRMNE-----VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 235

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           ++  AR L+  ++   ++P  VTY+T ++ YC+ GN+     L Q+M  K + P  +TY+
Sbjct: 236 RMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYS 295

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I+GLC++ +L +A +L E+M  +GV PD+ TY T+I   CK  ++ KA  L ++M   
Sbjct: 296 SLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 355

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            + P   TY++LI+GL  +   K A  LL  L   +     + Y  ++   C++ +    
Sbjct: 356 GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLC-CSKAEFKSV 414

Query: 573 MTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
           +        KG    +++  K +  M+  N +  D  +  +++    +GG++        
Sbjct: 415 VALLKGFCMKGL---MKEADKVYQSMLDRN-WKLDGSVYSILIHGHCRGGNVRKALSFHK 470

Query: 633 VMIKSGLLPD 642
            M++SG  P+
Sbjct: 471 QMLRSGFSPN 480



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 255/531 (48%), Gaps = 23/531 (4%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLY------NLRHTDIMWDLYDDIKVSETPRNV 63
           G + +AV V+  M+      +  TYN+L+        L   + +  L  + + +  P  V
Sbjct: 24  GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMRE-EGNAKPNLV 82

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             NS+V +GLC+  R++ A     E   +   P VVS N ++S YCK+G    +  +F  
Sbjct: 83  TFNSMV-NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE 141

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M + GL PD  ++  LIH  C AG++E+A+     M   G+  + +T++ L  GF     
Sbjct: 142 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 201

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A   ++++   G  P +V Y  LI GYC++G ++   +L   M ++  K +V+ YS 
Sbjct: 202 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++S  CK G +D A  L  +M   G+ PD +TYS LIRGLC++ +++ A +L+  M    
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 321

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P+ F +  ++ G C++  + +A    D +I    + DVV Y+++I+G  K     EA 
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 381

Query: 364 QLYRQLIEKRISPSIVTFN---------------SLIYGFCKNGKVADARRLLDTIKLHG 408
           +L  +L  +   P  + ++               +L+ GFC  G + +A ++  ++    
Sbjct: 382 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 441

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
            +     Y+  ++ +C  GN+++ L+  ++M      P   +   +++GL ++  + EA 
Sbjct: 442 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 501

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
             ++D+       D      +I    K  ++     +L  M    L P+S 
Sbjct: 502 NAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPSSG 552



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 198/425 (46%), Gaps = 53/425 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           Y + G +H+++ V ++M +  L   + T+ SL++      + +    L   ++      N
Sbjct: 126 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 185

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +IDG C++  L DA+L ++E       PSVV  NA+++ YCKLG  ++A+ L  
Sbjct: 186 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR 245

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M    + PD  +Y+ +I G C  G+++ A +    M + GV PDAITYS L +G     
Sbjct: 246 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 305

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +++ A ++ + +L  G  PD  TYT LI G+C+ GNVE+ L L + M+ +G   +V+ YS
Sbjct: 306 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 365

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV---------------------------- 274
           VL++ + KS R  EA  LL+++      PD +                            
Sbjct: 366 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 425

Query: 275 ----------------------TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
                                  YSILI G C+   V KA+  + +M     SPNS +  
Sbjct: 426 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 485

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           +++ GL E+ M+ EA      L+    + D      +ID   K GN+   + +   +   
Sbjct: 486 SLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARD 545

Query: 373 RISPS 377
            + PS
Sbjct: 546 GLLPS 550


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  291 bits (744), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 162/590 (27%), Positives = 310/590 (52%), Gaps = 5/590 (0%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRN 62
           S T  V DA+    +M  ++ + SI  +   L ++    +++ +++ L + + +      
Sbjct: 69  SNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVY-LCNQMDLFGVTHT 127

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VY+ +I+I+ LC+ + +  A+    +       P V++   +++  C  G  +VA  L+ 
Sbjct: 128 VYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYN 187

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M++ G  PD  SYN LI+GLC +G+   A+     M ++G +P+ +TY+ +        
Sbjct: 188 EMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDR 247

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            ++ A   + +++ +G  PD +TY  ++ G C +G + E  +L + M   G K +V+ Y+
Sbjct: 248 LVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYN 307

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +++ S+ K   +++A   L EM   G+ PD+VTY+ ++ GLC   ++++AI+L+ +M  K
Sbjct: 308 IIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQK 367

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P+  A+  I+  LC+  ++ +A  +   ++      + V Y+ ++ G+  LG + EA
Sbjct: 368 GCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEA 427

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            QL+++++ + + P+ +TF+ L+ G C+ G V++AR + +T+   G+EP+  TY   MN 
Sbjct: 428 TQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNG 487

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC    +     + + M  K   P   +Y ++I G C   ++ +A  LL  M V  +TP+
Sbjct: 488 YCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPN 547

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TYNTI++  C    L  A +L  +M    + PT  TY+IL++GLC +G L  A  L  
Sbjct: 548 TVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFK 607

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           S++E  +    + YT +I+     G +  A   F ++   G +   R Y 
Sbjct: 608 SMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYN 657



 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 173/593 (29%), Positives = 296/593 (49%), Gaps = 18/593 (3%)

Query: 2   LAFVYSRTGMVHDAVFV--IAKMKE----------LDLKVSIQTYNSL------LYNLRH 43
           +A +  R  +V    F+  IAKMK+          +DL     T  SL      L  L H
Sbjct: 84  MARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNH 143

Query: 44  TDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNA 103
            D    ++  +       +V T + +I+G+C + +++ A+    E       P V+S N 
Sbjct: 144 VDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNT 203

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           +++  C  G   +A  +F  M + G  P+  +YN +I  LC    + +A++F ++M   G
Sbjct: 204 LINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG 263

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           + PDAITY+ +  G   L Q++ A ++ +++   G  PD+VTY ++I    +   V +  
Sbjct: 264 IPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAA 323

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
                M+ QG   +V+ Y+ +L  +C  G+++EA+ L  +ME  G KPD+V Y+ +I  L
Sbjct: 324 DFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSL 383

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CK   V+ A++  +EM  + I PN+  +  IL G C    + EA   F  ++  N + + 
Sbjct: 384 CKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNT 443

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           + ++I++DG  + G + EA  ++  + EK + P+I T+N+L+ G+C   K+ +AR++ + 
Sbjct: 444 LTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEI 503

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +   G  P   +Y   +N YC    + +  ALL +M  K + P  VTY  ++KGLC   +
Sbjct: 504 MVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGR 563

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           L +A +L + M   G+ P  +TY+ ++   CK   L +A +L   M    LEP    Y I
Sbjct: 564 LLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTI 623

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           LI+G+ + G L+ A  L   L    I      Y  +IK    EG   +A   F
Sbjct: 624 LIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 161/549 (29%), Positives = 274/549 (49%), Gaps = 15/549 (2%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           +V SLN +++  C+L   + A  ++  M K G+ PD  ++  LI+G+C  G ++ A+E  
Sbjct: 127 TVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELY 186

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           N+M R G EPD I+Y+ L  G       + A  V +K+   G  P++VTY  +I   C+ 
Sbjct: 187 NEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKD 246

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
             V + +     M+ +G   + I Y+ ++  +C  G+++EA  L   ME  G KPD+VTY
Sbjct: 247 RLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTY 306

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +I+I  L K   V+ A    +EM  + I P+   +  IL GLC    + EA   F  +  
Sbjct: 307 NIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ 366

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
             C  DVV YN +ID   K   + +A++   +++++ I P+ VT++++++GFC  G++ +
Sbjct: 367 KGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A +L   +    + P+ +T++  ++  C+EG +     + + M  K + P   TY  ++ 
Sbjct: 427 ATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMN 486

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           G C + K+ EA ++ E M   G  PD  +YN +I  +C  + + KA  LL QM +  L P
Sbjct: 487 GYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTP 546

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            + TYN ++ GLC  G L +A  L   +    +  T + Y+ ++   C  G + +A+  F
Sbjct: 547 NTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLF 606

Query: 577 CQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQG 621
             M EK  E  I  YT               K  F  + ++G  P      VM+    + 
Sbjct: 607 KSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKE 666

Query: 622 GDLGSVFEL 630
           G     +EL
Sbjct: 667 GLSDEAYEL 675



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 152/510 (29%), Positives = 271/510 (53%), Gaps = 5/510 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           G +  AV +  +M     +  + +YN+L   L N  +T++   ++  ++ +    NV T 
Sbjct: 177 GKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTY 236

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +ID LC+   + DA+ FL E  G+   P  ++ N+I+   C LG    A  LF  M +
Sbjct: 237 NTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQ 296

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD  +YNI+I  L     + +A +F ++M   G+ PD +TY+ +  G   L Q++ 
Sbjct: 297 NGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNE 356

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A ++ +K+  KG  PD+V Y  +I   C+   V + ++    M+ +G   N + YS +L 
Sbjct: 357 AIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILH 416

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             C  G++DEA  L  EM    + P+ +T+SIL+ GLC++  V +A  ++  M  K + P
Sbjct: 417 GFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEP 476

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N + + A++ G C +  + EAR  F+ ++   C  D+  YNI+I+GY     + +A  L 
Sbjct: 477 NIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALL 536

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            Q+  K+++P+ VT+N+++ G C  G++ DA+ L   +   G+ P+ +TY+  +N  C+ 
Sbjct: 537 TQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKH 596

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G++   L L + M+ K + P  + YT++I+G+    KL+ A  L   +   G+ P   TY
Sbjct: 597 GHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTY 656

Query: 487 NTIIRSFCKCKDLRKAFQLLN--QMWLHNL 514
           N +I+   K     +A++L    +M  HN+
Sbjct: 657 NVMIKGLLKEGLSDEAYELFRKWKMMKHNV 686



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 132/319 (41%), Gaps = 20/319 (6%)

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           + +A   F  +   N    +V +   +    K+      V L  Q+    ++ ++ + N 
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI   C+   V  A  +   +   G++P  +T+TT +N  C EG I+  + L  EM    
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             P  ++Y  +I GLC       AV + + M   G  P+ +TYNTII S CK + +  A 
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
             L++M    + P + TYN ++ GLC  G L  A  L   ++++      V Y  II + 
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
             +  V+ A  F  +MV++                    G PPD      +L      G 
Sbjct: 314 YKDRLVNDAADFLSEMVDQ--------------------GIPPDVVTYTTILHGLCYLGQ 353

Query: 624 LGSVFELAAVMIKSGLLPD 642
           L     L   M + G  PD
Sbjct: 354 LNEAIRLFKKMEQKGCKPD 372


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 154/496 (31%), Positives = 270/496 (54%), Gaps = 2/496 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+ S N ++     +G     +  F L++  G  PD F++N ++     AG ++ AL  
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 156 TNDMGRH--GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
              MGR      PDA +Y+++  G     + S A KV  +++  G  P+ +TY  +I G+
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
            + G++E G +LR+ ML  G K NV+ Y+VLLS +C++GR+DE   L+ EM +  + PD 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            TYSIL  GL +  +    + L+ E   K +   ++    +L GLC+   + +A+  F+ 
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEM 359

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L+ +  +   V+YN +I+GY ++ ++  A  ++ Q+  + I P  +T+N+LI G CK   
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V  A  L+  ++  G++PS  T+ T ++AY   G +++   +L +M+ K I    +++  
Sbjct: 420 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 479

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           V+K  CK  K+ EAV +L+DM    V P+   YN+II ++ +  D  +A  L+ +M    
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSG 539

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           +  +  TYN+L+ GLC +  +  A+ L+ +L+   +    V+Y TII A C +GD  KA+
Sbjct: 540 VSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKAL 599

Query: 574 TFFCQMVEKGFEISIR 589
               +M + G   ++R
Sbjct: 600 ELLQEMNKYGIRPTLR 615



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 226/485 (46%), Gaps = 35/485 (7%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P + ++ ++VI GL +  +  DA+    E       P+ ++ N ++  + K G  E    
Sbjct: 191 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFR 250

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   ML  G  P+  +YN+L+ GLC  G M+E     ++M  H + PD  TYSIL  G  
Sbjct: 251 LRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLT 310

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +      +  + L KG      T ++L+ G C+ G V +  ++ E+++  G     +
Sbjct: 311 RTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTV 370

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L++  C+   +  A  +  +M++  ++PD +TY+ LI GLCK + V KA  L  EM
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 430

Query: 300 CSKRISP-----------------------------------NSFAHGAILLGLCEKEMI 324
               + P                                   +  + G+++   C+   I
Sbjct: 431 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            EA    D +I  +   +  +YN +ID Y++ G+  +A+ L  ++    +S SIVT+N L
Sbjct: 491 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLL 550

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           + G C++ ++ +A  L+ T++  GL P  V+Y T ++A C +G+  + L LLQEM    I
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 610

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            PT  T   ++  L    ++ +   L + M    V P    Y  ++ ++ +C++  K   
Sbjct: 611 RPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 670

Query: 505 LLNQM 509
           L  +M
Sbjct: 671 LKKEM 675



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 22/274 (8%)

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           PS+ + N L+      G+ AD R     +   G  P    +   + A    G++   LA+
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 436 LQEM--ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           L+ M     A  P   +Y VVI GL +  K  +A+++ ++M  +GV P++ITYNT+I   
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
            K  DL   F+L +QM     +P   TYN+L+ GLC  G +     L+  +  H++    
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
             Y+ +       G+    ++ F + ++KG  +       ++ C +L NG   D ++ + 
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVMLG------AYTCSILLNGLCKDGKVAKA 353

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                        VFE+   ++ +GL+P   + N
Sbjct: 354 K-----------QVFEM---LVHTGLVPTTVIYN 373



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 3/177 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPR 61
            + + G + +AV ++  M   D+  + Q YNS++        T+    L + +K S    
Sbjct: 483 AFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSA 542

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T ++++ GLC+ S++ +A   +     +   P VVS N I+S  C  G  + A  L 
Sbjct: 543 SIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELL 602

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             M KYG+ P   + + L+  L  AG + +       M    VEP +  Y I+   +
Sbjct: 603 QEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 659


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 176/623 (28%), Positives = 304/623 (48%), Gaps = 67/623 (10%)

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
           LQET    +  S V  + ++  Y +L   + A  +  L   +G  P   SYN ++     
Sbjct: 123 LQETYDLCYSTSSV-FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR 181

Query: 146 AG-SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
           +  ++  A     +M    V P+  TY+IL +GF     I  A  +  K+  KG  P++V
Sbjct: 182 SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVV 241

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TY  LI GYC++  +++G KL   M  +G + N+I+Y+V+++ +C+ GR+ E   +L EM
Sbjct: 242 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              G   D VTY+ LI+G CK+   H+A+ ++ EM    ++P+   + +++  +C+   +
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
             A  + D + +     +   Y  ++DG+ + G + EA ++ R++ +   SPS+VT+N+L
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G C  GK+ DA  +L+ +K  GL P  V+Y+T ++ +C   ++   L + +EM  K I
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  +TY+ +I+G C+Q + +EA  L E+M  +G+ PD+ TY  +I ++C   DL KA Q
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541

Query: 505 LLNQMWLHNLEPTSATYNILIDGL------------------------------------ 528
           L N+M    + P   TY++LI+GL                                    
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601

Query: 529 --------------CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
                         C+ G +  AD +  S+   N      AY  +I  HC  GD+ KA T
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661

Query: 575 FFCQMVEKGF---EISIRDYTK------------SFFCMMLSNGFPPDQEICEVMLIAFH 619
            + +MV+ GF    +++    K            S    +L +    + E  +V++   H
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINH 721

Query: 620 QGGDLGSVFELAAVMIKSGLLPD 642
           + G++  V ++ A M K G LP+
Sbjct: 722 REGNMDVVLDVLAEMAKDGFLPN 744



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 153/571 (26%), Positives = 282/571 (49%), Gaps = 25/571 (4%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           V  +M E  +  ++ TYN L+       + D+   L+D ++      NV T + +IDG C
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +  ++ D    L+  A K   P+++S N +++  C+ G  +    +   M + G   D  
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +YN LI G C  G+  +AL    +M RHG+ P  ITY+ L         ++ A + + ++
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
            ++G  P+  TYT L+ G+ Q G + E  ++   M   GF  +V+ Y+ L++  C +G++
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           ++A+ +L +M+  GL PD+V+YS ++ G C+   V +A+++  EM  K I P++  + ++
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G CE+    EA   ++ ++      D   Y  +I+ Y   G++ +A+QL+ +++EK +
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P +VT++ LI G  K  +  +A+RLL  +      PS VTY T +   C     + +++
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVS 610

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L                   IKG C +  + EA Q+ E M      PD   YN +I   C
Sbjct: 611 L-------------------IKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 651

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS-LQEHNISLTK 553
           +  D+RKA+ L  +M        + T   L+  L   G +   + ++V  L+   +S  +
Sbjct: 652 RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAE 711

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            A   +++ +  EG++   +    +M + GF
Sbjct: 712 QA-KVLVEINHREGNMDVVLDVLAEMAKDGF 741



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 209/405 (51%), Gaps = 21/405 (5%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK-VHKAIQLYNEM 299
           + +++ S  +   ID+AL +++  +A G  P +++Y+ ++    +  + +  A  ++ EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
              ++SPN F +  ++ G C    I  A   FD +    C+ +VV YN +IDGY KL  I
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +  +L R +  K + P+++++N +I G C+ G++ +   +L  +   G     VTY T 
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +  YC+EGN  + L +  EM    + P+ +TYT +I  +CK   +  A++ L+ M V G+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P++ TY T++  F +   + +A+++L +M  +   P+  TYN LI+G CV G +++A  
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           +L  ++E  +S   V+Y+T++   C   DV +A+    +MVEKG +              
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK-------------- 482

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                 PD      ++  F +        +L   M++ GL PD+F
Sbjct: 483 ------PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 159/347 (45%), Gaps = 53/347 (15%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRN 62
           Y + G  H A+ + A+M    L  S+ TY SL++++     M    +  D ++V     N
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + ++DG  Q+  + +A   L+E     F PSVV+ NA+++ +C  G  E A  +  
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + GL PD  SY+ ++ G C +  ++EAL    +M   G++PD ITYS L +GF    
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A  + +++L  G  PD  TYT LI  YC  G++E+ L+L   M+ +G   +V+ YS
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559

Query: 243 VLLSSMCKSGRIDEA----LGLLYE----------------------------------- 263
           VL++ + K  R  EA    L L YE                                   
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619

Query: 264 -----------MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
                      M     KPD   Y+I+I G C+   + KA  LY EM
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 161/526 (30%), Positives = 278/526 (52%), Gaps = 5/526 (0%)

Query: 12  VHDAVFVIAKMKELDLKVSIQT--YNSLLYNLRHTD---IMWDLYDDIKVSETPRNVYTN 66
           ++D V  I K+ E + ++   T  YN LL  L   +   ++   +  +       +V T 
Sbjct: 147 LYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTF 206

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+I  LC+  +++ AIL ++E       P   +   IM  Y + G  + A  +   M++
Sbjct: 207 NILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVE 266

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           YG      + N+LI+G C  G +++AL F  +    G  PD  TY+ L  G   +     
Sbjct: 267 YGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKH 326

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +V+  +L+ G DPDI TY  LI G C++G +EE +K+ + M+S+    N + Y+ ++S
Sbjct: 327 AMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIIS 386

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           S+CK  R+DEA  +   + + G+ PD+ T++ LI+GLC       A+ L+ EM  K   P
Sbjct: 387 SLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRP 446

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           + F +  ++  LC    + EA      + ++ C ++VV+YN +IDG+ K   I EA +++
Sbjct: 447 DEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIF 506

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++  + +S   VT+N+LI G CK+ +V DA +L+D + + GL P   TY + +  +C+ 
Sbjct: 507 DEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKT 566

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G+I++   ++Q M +    P  VTY  +I GLCK  ++Q A +LL  + + G+      Y
Sbjct: 567 GDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAY 626

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           N +I++  K     +A +L  +M   +  P + TY I+  GLC  G
Sbjct: 627 NPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGG 672



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 268/520 (51%), Gaps = 21/520 (4%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M++  +  D  ++NILI  LC A  +  A+    +M  +G+ PD  T++ + +G+     
Sbjct: 194 MVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGN 253

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           + GA ++ ++++  G     VT  VLI G+C+ G +++ L   +  +S+GF+ +   Y+ 
Sbjct: 254 LDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNT 313

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++ +CK G    A+ ++  M   GL PD+ TY+ LI GLCK  ++ +A+++ ++M S+ 
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD 373

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            SPN+  + AI+  LC++  + EA      L     + DV  +N +I G     N   A+
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAM 433

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L+ ++  K   P   T+N LI   C + K+ +A  LL  ++L+G   + V Y T ++ +
Sbjct: 434 DLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGF 493

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+   I+    +  EME + +    VTY  +I GLCK  ++++A QL++ M + G+ PD+
Sbjct: 494 CKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDK 553

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            TYN+++  FCK  D++KA  ++  M      P   TY  LI GLC  G ++ A  LL S
Sbjct: 554 FTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRS 613

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           +Q   + LT  AY  +I+A       H+AM  F +M++K                     
Sbjct: 614 IQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDK--------------------S 653

Query: 604 FPPDQEICEVMLIAF-HQGGDLGSVFELAAVMIKSGLLPD 642
            PPD    +++     + GG +G   +    MI+ G +P+
Sbjct: 654 EPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPE 693



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 184/386 (47%), Gaps = 4/386 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
           + G    A+ V+  M    L   I TYNSL   L  L   +    + D +   +   N  
Sbjct: 320 KIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAV 379

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I  LC+++R+ +A    +    K   P V + N+++   C     + A  LF  M
Sbjct: 380 TYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEM 439

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G  PD F+YN+LI  LC +  +EEAL    +M  +G   + + Y+ L  GF    +I
Sbjct: 440 KGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRI 499

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++  ++ ++G   D VTY  LI G C+   VE+  +L + M+ +G + +   Y+ L
Sbjct: 500 EEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSL 559

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L+  CK+G I +A  ++  M + G  PD+VTY+ LI GLCK  +V  A +L   +  K +
Sbjct: 560 LTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGM 619

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN-IGEAV 363
                A+  ++  L ++    EA   F  ++  +   D + Y I+  G    G  IGEAV
Sbjct: 620 VLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAV 679

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFC 389
               ++IE+   P   +F  L  G C
Sbjct: 680 DFTVEMIERGNIPEFSSFVMLAEGLC 705



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 157/353 (44%), Gaps = 40/353 (11%)

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS--PNSFAHGAILLGLCEKEMITE 326
           L PD  T   LI  L +Q     A++++N   SK+ +  P+S  +  IL  L +      
Sbjct: 58  LPPDF-TPKQLIETLRRQTDEVAALRVFN-WASKQPNFVPSSSVYEEILRKLGKAGSFEY 115

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL-------YR------------ 367
            R   + + +S C  D  ++ I ++ Y K     E V +       YR            
Sbjct: 116 MRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLL 175

Query: 368 -----------------QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
                             ++ +RI   + TFN LI   CK  +V  A  +++ +  +GL 
Sbjct: 176 NVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLS 235

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P   T+TT M  Y E GN+   L + ++M       T VT  V+I G CKQ ++ +A+  
Sbjct: 236 PDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSF 295

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           +++    G  PDQ TYNT++   CK    + A ++++ M L  L+P   TYN LI GLC 
Sbjct: 296 IQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCK 355

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            G+++ A  +L  +   + S   V Y  II + C E  V +A      +  KG
Sbjct: 356 LGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG 408



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 111/273 (40%), Gaps = 21/273 (7%)

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           PS   +  ++    K G     RR+L+ +KL G E     +  F+ +Y +      ++ +
Sbjct: 95  PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGI 154

Query: 436 LQEMETK-AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           ++ ME +  I P    Y V++  L    KL+        M    +  D  T+N +I++ C
Sbjct: 155 VKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALC 214

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K   +R A  ++ +M  + L P   T+  ++ G    G+L  A  +   + E+    T V
Sbjct: 215 KAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDV 274

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
               +I   C +G + +A++F  + V                    S GF PDQ     +
Sbjct: 275 TVNVLINGFCKQGRIDQALSFIQEAV--------------------SEGFRPDQFTYNTL 314

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +    + G      E+   M+  GL PD +  N
Sbjct: 315 VNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYN 347



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 10/222 (4%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT-DI--MWDLYDDIKVSETPRNVY 64
           ++  V DA  ++ +M    L+    TYNSLL +   T DI    D+   +  S    ++ 
Sbjct: 530 KSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIV 589

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I GLC+  R+Q A   L+    K    +  + N ++    K      A  LF  M
Sbjct: 590 TYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREM 649

Query: 125 LKYGLHPDAFSYNILIHGLCIAG-SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           L     PDA +Y I+  GLC  G  + EA++FT +M   G  P+  ++ +LA+G   LS 
Sbjct: 650 LDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSM 709

Query: 184 ISGAWKVIQKLLIKG--SDPDIVTYTVLICGYCQIGNVEEGL 223
                K++  ++ K   S+ +I T    I G+ +I   ++ L
Sbjct: 710 DDTLVKLVDMIMEKAKFSEREIST----IRGFLKIRKFQDAL 747


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 189/652 (28%), Positives = 305/652 (46%), Gaps = 23/652 (3%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           ++ +M E     ++ + N+LL  L          +++  + +D   + TP NV T + +I
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTP-NVVTYNTII 206

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           DGLC+   +  A   LQ    K     VV+ + I+   CK    + A+G+   M+  G+ 
Sbjct: 207 DGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVK 266

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD  +YN +I GLC A +++ A      M   GV+PD +TY+ +  G      +  A  V
Sbjct: 267 PDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGV 326

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           +Q ++ K   PDI TY  LI GY   G  +E ++  E M ++G   +V+ YS+LL  +CK
Sbjct: 327 LQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCK 386

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           +G+  EA  + Y M   G+KP++  Y IL+ G   +  +     L + M +  ISPN++ 
Sbjct: 387 NGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYI 446

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
              +L    +K MI EA   F  +       DVV Y I+ID   KLG + +AV  + Q+I
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMI 506

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
              ++P+ V FNSL+YG C   +   A  L   +   G+ P+ V + T M   C EG + 
Sbjct: 507 NDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVM 566

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L+  ME   + P  ++Y  +I G C   +  EA QLL+ M  +G+ PD I+Y+T++
Sbjct: 567 VAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLL 626

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
           R +CK   +  A+ L  +M    + P + TY+ ++ GL        A  L +++ +    
Sbjct: 627 RGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQ 686

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSF 595
                Y  I+   C    V +A   F  +  K    +I  +T                  
Sbjct: 687 WDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDL 746

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           F  + S+G  P+     +M+    Q G L     L   M KSG  PD  ++N
Sbjct: 747 FASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLN 798



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 151/565 (26%), Positives = 266/565 (47%), Gaps = 19/565 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE- 154
           P + + + +   +C+LG  E     F L+LK G   +    N L++GLC A  ++EA++ 
Sbjct: 88  PDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDI 147

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS---DPDIVTYTVLIC 211
               M   G  P+ ++ + L KG     ++  A +++  +   G     P++VTY  +I 
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIID 207

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           G C+   V+    + + M+ +G KL+V+ YS ++  +CK+  +D A G+L  M   G+KP
Sbjct: 208 GLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 267

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D+VTY+ +I GLCK   V +A  +   M  K + P+   +  I+ GLC+ + +  A    
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVL 327

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             +I  +   D+  YN +I GY+  G   E V+   ++  + + P +VT++ L+   CKN
Sbjct: 328 QHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           GK  +AR++   +   G++P+   Y   ++ Y   G I  L  LL  M    I P +  +
Sbjct: 388 GKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF 447

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            +V+    K+  + EA+ +   M   G++PD +TY  +I + CK   +  A    NQM  
Sbjct: 448 NIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIN 507

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             + P S  +N L+ GLC     + A+ L   + +  +    V + TI+   C EG V  
Sbjct: 508 DGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMV 567

Query: 572 AMTFFCQMVEKGFEISI---------------RDYTKSFFCMMLSNGFPPDQEICEVMLI 616
           A      M   G   ++                D       +M+S G  PD    + +L 
Sbjct: 568 AQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLR 627

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLP 641
            + + G + + + L   M++ G+ P
Sbjct: 628 GYCKTGRIDNAYCLFREMLRKGVTP 652



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 159/617 (25%), Positives = 284/617 (46%), Gaps = 46/617 (7%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETPRNVY 64
           V  A  V+  M +  +K+ + TY++++  L       R   ++  + D         +V 
Sbjct: 215 VDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMID----KGVKPDVV 270

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +IDGLC+   +  A   LQ    K   P VV+ N I+   CK    + A G+   M
Sbjct: 271 TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM 330

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +   + PD  +YN LIHG    G  +E +    +M   G++PD +TYS+L        + 
Sbjct: 331 IDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKC 390

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A K+   ++ KG  P++  Y +L+ GY   G + +   L ++M++ G   N   ++++
Sbjct: 391 TEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIV 450

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L +  K   IDEA+ +   M   GL PD+VTY ILI  LCK  +V  A+  +N+M +  +
Sbjct: 451 LCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGV 510

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +PNS    +++ GLC  +   +A   F  +       +VV +N ++      G +  A +
Sbjct: 511 TPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQR 570

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L   +    + P+++++N+LI G C  G+  +A +LLD +   GL+P  ++Y T +  YC
Sbjct: 571 LIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYT-------------------------------- 452
           + G I     L +EM  K + P  VTY+                                
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIY 690

Query: 453 ---VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
              +++ GLCK   + EA ++ + +    + P+ IT+  +I    K    + A  L   +
Sbjct: 691 TYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASI 750

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
             H L P   TY I++  +   G L   D L +++++   +   V    II++    G++
Sbjct: 751 PSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEI 810

Query: 570 HKAMTFFCQMVEKGFEI 586
            +A  +  ++ E  F +
Sbjct: 811 MRAGAYLSKIDEMNFSL 827



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 236/494 (47%), Gaps = 5/494 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL----YNLRHTDIMWDLYDDIKVSETPR 61
           Y  TG   + V  + +M    L   + TY+ LL     N + T+     Y  I+    P 
Sbjct: 349 YLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKP- 407

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV    I++ G   +  + D    L         P+    N ++  Y K    + A  +F
Sbjct: 408 NVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIF 467

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M ++GL PD  +Y ILI  LC  G +++A+   N M   GV P+++ ++ L  G   +
Sbjct: 468 SRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTV 527

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A ++  ++  +G  P++V +  ++C  C  G V    +L + M   G + NVI+Y
Sbjct: 528 DRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISY 587

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C +GR DEA  LL  M +VGLKPDL++Y  L+RG CK  ++  A  L+ EM  
Sbjct: 588 NTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLR 647

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K ++P +  +  IL GL      +EA+  + ++I S    D+  YNI+++G  K   + E
Sbjct: 648 KGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDE 707

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A ++++ L  K + P+I+TF  +I    K G+  DA  L  +I  HGL P+ VTY   M 
Sbjct: 708 AFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMK 767

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
              +EG +     L   ME     P  V    +I+ L  + ++  A   L  +  +  + 
Sbjct: 768 NIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSL 827

Query: 482 DQITYNTIIRSFCK 495
           +  T + +I  F +
Sbjct: 828 EASTTSLLISLFSR 841



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 128/289 (44%), Gaps = 3/289 (1%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTN 66
           G V  A  +I  M+ + ++ ++ +YN+L+        TD    L D +       ++ + 
Sbjct: 563 GQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISY 622

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
             ++ G C+  R+ +A    +E   K   P  V+ + I+           AK L+  M+K
Sbjct: 623 DTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIK 682

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G   D ++YNI+++GLC    ++EA +    +    + P+ IT++I+        +   
Sbjct: 683 SGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKD 742

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  +   +   G  P++VTY +++    Q G ++E   L   M   G   + +  + ++ 
Sbjct: 743 AMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIR 802

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           S+   G I  A   L +++ +    +  T S+LI    +++  + A  L
Sbjct: 803 SLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 165/564 (29%), Positives = 290/564 (51%), Gaps = 17/564 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+ S N ++     +G     +  F L++  G  PD F++N ++     AG ++ AL  
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 156 TNDMGRH--GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
              MGR      PDA +Y+++  G     + S A KV  +++  G  P+ +TY  +I G+
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
            + G++E G +LR+ ML  G K N++ Y+VLLS +C++GR+DE   L+ EM +  + PD 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            TYSIL  GL +  +    + L+ E   K +   ++    +L GLC+   + +A    + 
Sbjct: 300 FTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEM 359

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L+ +  +   V+YN +I+GY ++ ++  A  ++ Q+  + I P  +T+N+LI G CK   
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V  A  L+  ++  G++PS  T+ T ++AY   G +++   +L +M+ K I    +++  
Sbjct: 420 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 479

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           V+K  CK  K+ EAV +L+DM    V P+   YN+II ++ +  D  +AF L+ +M    
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSG 539

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           +  +  TYN+L+ GLC +  +  A+ L+ +L+   +    V+Y TII A C +GD  KA+
Sbjct: 540 VSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKAL 599

Query: 574 TFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAF 618
               +M + G   ++R Y                +  +  ML     P   I  +M+ A+
Sbjct: 600 ELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 659

Query: 619 HQGGDLGSVFELAAVMIKSGLLPD 642
            +  +   V  L   M + G+  D
Sbjct: 660 VRCENDSKVASLKKEMSEKGIAFD 683



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 227/485 (46%), Gaps = 35/485 (7%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P + ++ ++VI GL +  +  DA+    E       P+ ++ N ++  + K G  E    
Sbjct: 191 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR 250

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   ML  G  P+  +YN+L+ GLC AG M+E     ++M  H + PD  TYSIL  G  
Sbjct: 251 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 310

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +      +  + L KG      T ++L+ G C+ G V +  ++ E+++  G     +
Sbjct: 311 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 370

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L++  C+   +  A  +  +M++  ++PD +TY+ LI GLCK + V KA  L  EM
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 430

Query: 300 CSKRISP-----------------------------------NSFAHGAILLGLCEKEMI 324
               + P                                   +  + G+++   C+   I
Sbjct: 431 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            EA    D +I  +   +  +YN +ID Y++ G+  +A  L  ++    +S SIVT+N L
Sbjct: 491 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 550

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           + G C++ ++ +A  L+ T++  GL P  V+Y T ++A C +G+  + L LLQEM    I
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 610

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            PT  TY  ++  L    ++ +   L + M    V P    Y  ++ ++ +C++  K   
Sbjct: 611 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 670

Query: 505 LLNQM 509
           L  +M
Sbjct: 671 LKKEM 675



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 22/274 (8%)

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           PS+ + N L+      G+ AD R     +   G  P    +   + A    G++   LA+
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 436 LQEM--ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           ++ M     A  P   +Y VVI GL +  K  +A+++ ++M  +GV P+ ITYNT+I   
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
            K  DL   F+L +QM     +P   TYN+L+ GLC  G +     L+  +  H++    
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
             Y+ +       G+    ++ F + ++KG  +       ++ C +L NG   D      
Sbjct: 300 FTYSILFDGLTRTGESRTMLSLFAESLKKGVMLG------AYTCSILLNGLCKD------ 347

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                   G +    ++  +++ +GL+P   + N
Sbjct: 348 --------GKVAKAEQVLEMLVHTGLVPTTVIYN 373



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 3/177 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPR 61
            + + G + +AV ++  M   D+  + Q YNS++        T+  + L + +K S    
Sbjct: 483 AFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSA 542

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T ++++ GLC+ S++ +A   +     +   P VVS N I+S  C  G  + A  L 
Sbjct: 543 SIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELL 602

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             M KYG+ P   +Y+ L+  L  AG + +       M    VEP +  Y I+   +
Sbjct: 603 QEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 659


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 145/485 (29%), Positives = 263/485 (54%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           +LN ++  YCK    +    +   M K  + PD  ++N+++     AG  E A+   + M
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 217

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              G++P  +TY+ + KG         AW+V +++   G  PD+ ++T+LI G+C++G +
Sbjct: 218 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 277

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           EE LK+ + M  +G K +++++S L+    + G++D A+  L EM   GL PD V Y+++
Sbjct: 278 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I G C+   +  A+++ +EM      P+   +  +L GLC++  + +A    + +     
Sbjct: 338 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             D+  +  +I GY   G + +A+QL+  ++ +R+ P IVT+N+LI G C+ G +  A  
Sbjct: 398 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 457

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L D +    + P+ VTY+  ++++CE+G ++     L EM  K I P  +TY  +IKG C
Sbjct: 458 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 517

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           +   + +  + L+ M V  V+PD ITYNT+I  + K   +  AF+LLN M    ++P   
Sbjct: 518 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVV 577

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYN+LI+G  V+G+++ A  +   +    I   +  Y ++I  H   G+  +A     +M
Sbjct: 578 TYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 637

Query: 580 VEKGF 584
           +++GF
Sbjct: 638 LQRGF 642



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 253/455 (55%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T+++++D   +    + A+  +     K   P +V+ N+++   C+ G  + A  +F
Sbjct: 190 DVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF 249

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M  +G+ PD  S+ ILI G C  G +EEAL+   +M   G++PD +++S L   F   
Sbjct: 250 KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR 309

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A   ++++   G  PD V YT++I G+C+ G + + L++R+ M+  G   +V+ Y
Sbjct: 310 GKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTY 369

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL+ +CK  R+ +A GLL EM   G+ PDL T++ LI G C + K+ KA+QL++ M +
Sbjct: 370 NTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN 429

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +R+ P+   +  ++ G+C +  + +A   +D +       + V Y+I+ID + + G + +
Sbjct: 430 QRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVED 489

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A     ++I K I P+I+T+NS+I G+C++G V+  ++ L  + ++ + P  +TY T ++
Sbjct: 490 AFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIH 549

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            Y +E  +     LL  ME + + P  VTY ++I G      +QEA  + E M   G+ P
Sbjct: 550 GYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEP 609

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           D+ TY ++I       + ++AFQL ++M      P
Sbjct: 610 DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 644



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/533 (26%), Positives = 267/533 (50%), Gaps = 20/533 (3%)

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           + G+  +A   + L+       + ++ NI++H  C A   ++     ++M +  V PD +
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 192

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           T++++            A  ++  ++ KG  P IVTY  ++ G C+ G  ++  ++ + M
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 252

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
              G   +V ++++L+   C+ G I+EAL +  EM   G+KPDLV++S LI    ++ K+
Sbjct: 253 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 312

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             A+    EM    + P+   +  ++ G C   ++++A    D ++   C+ DVV YN +
Sbjct: 313 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 372

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           ++G  K   + +A  L  ++ E+ + P + TF +LI+G+C  GK+  A +L DT+    L
Sbjct: 373 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 432

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P  VTY T ++  C +G++ +   L  +M ++ I P HVTY+++I   C++ ++++A  
Sbjct: 433 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 492

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
            L++M   G+ P+ +TYN+II+ +C+  ++ K  + L +M ++ + P   TYN LI G  
Sbjct: 493 FLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYI 552

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
               + +A  LL  +++  +    V Y  +I      G+V +A   F +M  KG E    
Sbjct: 553 KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE---- 608

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                           PD+     M+      G+    F+L   M++ G  PD
Sbjct: 609 ----------------PDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 253/489 (51%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           D Y  +  S +  N YT +I++   C+          + E   +   P VV+ N ++   
Sbjct: 142 DAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDAR 201

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
            + G AE A  L   M+  GL P   +YN ++ GLC +G  ++A E   +M   GV PD 
Sbjct: 202 FRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDV 261

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
            +++IL  GF  + +I  A K+ +++  +G  PD+V+++ LI  + + G ++  +     
Sbjct: 262 RSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE 321

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   G   + + Y++++   C++G + +AL +  EM   G  PD+VTY+ L+ GLCK+ +
Sbjct: 322 MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 381

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           +  A  L NEM  + + P+      ++ G C +  + +A   FD+++      D+V YN 
Sbjct: 382 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 441

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDG  + G++ +A  L+  +  + I P+ VT++ LI   C+ G+V DA   LD +   G
Sbjct: 442 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKG 501

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P+ +TY + +  YC  GN+ +    LQ+M    + P  +TY  +I G  K+ K+ +A 
Sbjct: 502 ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAF 561

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +LL  M    V PD +TYN +I  F    ++++A  +  +M    +EP   TY  +I+G 
Sbjct: 562 KLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGH 621

Query: 529 CVNGDLKNA 537
              G+ K A
Sbjct: 622 VTAGNSKEA 630



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 169/372 (45%), Gaps = 67/372 (18%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + R G++ DA+ V  +M        + TYN+LL                           
Sbjct: 341 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLL--------------------------- 373

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
                +GLC++ RL DA   L E   +   P + +   ++  YC  G  + A  LF  ML
Sbjct: 374 -----NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 428

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
              L PD  +YN LI G+C  G +++A +  +DM    + P+ +TYSIL        Q+ 
Sbjct: 429 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 488

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A+  + +++ KG  P+I+TY  +I GYC+ GNV +G K  + M+      ++I Y+ L+
Sbjct: 489 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 548

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
               K  ++ +A  LL  ME   ++PD+VTY++LI G      V +A  ++ +MC+K I 
Sbjct: 549 HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE 608

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+ +                                    Y  MI+G+V  GN  EA QL
Sbjct: 609 PDRYT-----------------------------------YMSMINGHVTAGNSKEAFQL 633

Query: 366 YRQLIEKRISPS 377
           + +++++  +P 
Sbjct: 634 HDEMLQRGFAPD 645



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 147/329 (44%), Gaps = 33/329 (10%)

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           G C +E+++       SL+ S+      +++++I  Y +     EA + +R +++ R+  
Sbjct: 67  GACRREIVS-------SLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPI 119

Query: 377 SIVTFNSLIYGFCKNGK---VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
                N+L+    + G     ADA RL+ +      E +  T    ++ YC+     ++ 
Sbjct: 120 PAAASNALLAALSRAGWPHLAADAYRLVFS---SNSEVNTYTLNIMVHNYCKALEFDKVD 176

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           A++ EME + + P  VT+ V++    +    + A+ L++ M   G+ P  +TYN++++  
Sbjct: 177 AVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGL 236

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C+     KA+++  +M    + P   ++ ILI G C  G+++ A  +   ++   I    
Sbjct: 237 CRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDL 296

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
           V+++ +I      G +  AM +  +M             + F       G  PD  I  +
Sbjct: 297 VSFSCLIGLFARRGKMDHAMAYLREM-------------RCF-------GLVPDGVIYTM 336

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           ++  F + G +     +   M+  G LPD
Sbjct: 337 VIGGFCRAGLMSDALRVRDEMVGCGCLPD 365


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 173/573 (30%), Positives = 290/573 (50%), Gaps = 39/573 (6%)

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL--MLKYGLHPDAFSYNILIHGLC 144
           +E       P+V + N ++  +C +G  E+ KGL C   M + G  P+  +YN LI   C
Sbjct: 203 REMIRSRVSPNVYTYNILIRGFCSVG--ELQKGLGCFGEMERNGCLPNVVTYNTLIDAYC 260

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
             G ++EA      M   G++P+ I+Y+++  G      +  AW++++++  KG  PD V
Sbjct: 261 KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV 320

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TY  L+ GYC+ GN  + L +   M+  G   +V+ Y+ L++SMCK+  ++ A+    +M
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 380

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              GL+P+  TY+ LI G  +Q  +++A ++ NEM     SP+   + A + G C  E +
Sbjct: 381 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 440

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            EA      ++      DVV Y+ +I G+ + G +  A Q+ ++++EK +SP  VT++SL
Sbjct: 441 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL 500

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G C+  ++ +A  L   +   GL P   TYTT +NAYC EG++ + L L  EM  K  
Sbjct: 501 IQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGF 560

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  VTY+V+I GL KQ + +EA +LL  +      P  +TY+T+I + C          
Sbjct: 561 LPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIEN-CS--------- 610

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
                   N+E  S     LI G C+ G +  AD +  S+ E N    +  Y  II  HC
Sbjct: 611 --------NIEFKSVV--ALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHC 660

Query: 565 AEGDVHKAMTFFCQMVEKGF---EISIRDYTKSFFCMMLSNGFPP------------DQE 609
             G++ KA   + +M+  GF    +++    K+ F   ++                 + E
Sbjct: 661 RGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAE 720

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           + +V++   H+ G++ +V  +   M K GLLP+
Sbjct: 721 LAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753



 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 165/565 (29%), Positives = 284/565 (50%), Gaps = 37/565 (6%)

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA-GSME-E 151
           +  S    + ++  Y  L   + A     L    G  P   SYN ++  +  + GS++  
Sbjct: 138 YNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLS 197

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A E   +M R  V P+  TY+IL +GF  + ++        ++   G  P++VTY  LI 
Sbjct: 198 AEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLID 257

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
            YC++G ++E   L + M S+G + N+I+Y+V+++ +C+ G + EA  +L EM   G  P
Sbjct: 258 AYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP 317

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D VTY+ L+ G CK+   H+A+ ++ EM    +SP+   + A++  +C+   +  A  +F
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 377

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           D + +     +   Y  +IDG+ + G + EA ++  ++ E   SPS+VT+N+ I+G C  
Sbjct: 378 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 437

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
            ++ +A  ++  +   GL P  V+Y+T ++ +C +G + R   + QEM  K + P  VTY
Sbjct: 438 ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 497

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           + +I+GLC+  +L EA  L ++M  +G+ PD+ TY T+I ++C   DL KA  L ++M  
Sbjct: 498 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 557

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT------------- 558
               P + TY++LI+GL      + A  LL  L       + V Y T             
Sbjct: 558 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSV 617

Query: 559 --IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
             +IK  C +G +H+A   F  MVE+  +                    P + +  V++ 
Sbjct: 618 VALIKGFCMKGLMHEADRVFESMVERNHK--------------------PGEAVYNVIIH 657

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLP 641
              +GG+L   F L   MI SG +P
Sbjct: 658 GHCRGGNLPKAFNLYKEMIHSGFVP 682



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 162/600 (27%), Positives = 280/600 (46%), Gaps = 22/600 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD-----IMWDLYDDIKVSETP 60
           YS   M+  AV  I   K       + +YNS+L  +  +         ++Y ++  S   
Sbjct: 152 YSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVS 211

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            NVYT +I+I G C    LQ  +    E       P+VV+ N ++  YCK+G  + A GL
Sbjct: 212 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 271

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M   G+ P+  SYN++I+GLC  GSM+EA E   +MG  G  PD +TY+ L  G+  
Sbjct: 272 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 331

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
                 A  +  +++  G  P +VTYT LI   C+  N+   ++  + M  +G + N   
Sbjct: 332 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 391

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+    + G ++EA  +L EM   G  P +VTY+  I G C  +++ +A+ +  EM 
Sbjct: 392 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 451

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K ++P+  ++  I+ G C K  +  A      ++      D V Y+ +I G  ++  + 
Sbjct: 452 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 511

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  L +++++  + P   T+ +LI  +C  G +  A  L D +   G  P AVTY+  +
Sbjct: 512 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 571

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTY---------------TVVIKGLCKQWKLQ 465
           N   ++   +    LL ++  +   P+ VTY                 +IKG C +  + 
Sbjct: 572 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMH 631

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA ++ E M      P +  YN II   C+  +L KAF L  +M      P + T   LI
Sbjct: 632 EADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLI 691

Query: 526 DGLCVNG-DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             L   G + + ++ +  +L+   ++  ++A   +++ +  EG++   +     M + G 
Sbjct: 692 KALFKEGMNEEMSEVIGDTLRSCRLNEAELA-KVLVEINHKEGNMEAVLNVLTDMAKDGL 750



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 222/446 (49%), Gaps = 25/446 (5%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G  H A+ + A+M    +  S+ TY +L+ ++   R+ +   + +D +++     N
Sbjct: 329 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 388

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +IDG  +Q  L +A   L E     F PSVV+ NA +  +C L   E A G+  
Sbjct: 389 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 448

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M++ GL PD  SY+ +I G C  G ++ A +   +M   GV PDA+TYS L +G   + 
Sbjct: 449 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 508

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +++ A  + Q++L  G  PD  TYT LI  YC  G++ + L L + M+ +GF  + + YS
Sbjct: 509 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYS 568

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           VL++ + K  R  EA  LL+++      P  VTY  LI                 E CS 
Sbjct: 569 VLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI-----------------ENCSN 611

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I   S    A++ G C K ++ EA   F+S++  N      +YN++I G+ + GN+ +A
Sbjct: 612 -IEFKSVV--ALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKA 668

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL-DTIKLHGLEPSAVTYTTFMN 421
             LY+++I     P  VT  +LI    K G   +   ++ DT++   L  + +     + 
Sbjct: 669 FNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELA-KVLVE 727

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPT 447
              +EGN++ +L +L +M    + P 
Sbjct: 728 INHKEGNMEAVLNVLTDMAKDGLLPN 753


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 167/559 (29%), Positives = 283/559 (50%), Gaps = 38/559 (6%)

Query: 29  VSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILF 85
           VSI   NSLL  L   D   + W+++ ++  S    NVYT +I+++ L            
Sbjct: 81  VSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNAL------------ 128

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
                                  CK G  +  K     M   G++ D  +YN LI   C 
Sbjct: 129 -----------------------CKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCR 165

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
            G +EEA E  N M   G++P   TY+ +  G     + + A  ++ ++L  G  PD  T
Sbjct: 166 EGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTT 225

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y  L+   C+  N  E  ++   ML QG   +++++S L++   ++  +D+AL    +M+
Sbjct: 226 YNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMK 285

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             GL PD V Y++L+ G C+   + +A+++ +EM  +    +  A+  IL GLC+++M+T
Sbjct: 286 KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLT 345

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +A   FD ++    + D   +  +I G+ + GN+ +A+ L+  + ++ I P IV +N+LI
Sbjct: 346 DADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLI 405

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            GFCK G++  A  L D +    + P+ +TY   +NAYC  G++     L   M  K I 
Sbjct: 406 DGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIK 465

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           PT VT   VIKG C+     +A + L  M   GV PD I+YNT+I  F +  ++ KAF  
Sbjct: 466 PTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLW 525

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           +N+M    L P   TYN++++G C  G ++ A+ +L  + E  I+  +  YT +I  H  
Sbjct: 526 INKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVT 585

Query: 566 EGDVHKAMTFFCQMVEKGF 584
           + ++++A  F  +M+++GF
Sbjct: 586 QDNLNEAFRFHDEMLQRGF 604



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 149/606 (24%), Positives = 288/606 (47%), Gaps = 54/606 (8%)

Query: 56  VSETPRNVYTNSIVIDGL----CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
           VS    N  TN++V D L     Q  +L++     +    K +  S+ + N+++    K+
Sbjct: 37  VSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKI 96

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
            + E+A  +   +++ G+  + ++ NI+++ LC  G  ++   F ++M  +G+  D    
Sbjct: 97  DWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYAD---- 152

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
                                          +VTY  LI  YC+ G +EE  ++   M  
Sbjct: 153 -------------------------------MVTYNTLIGAYCREGLLEEAFEIMNSMAD 181

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +G K ++  Y+ +++ +CK GR   A G+L EM  +GL PD  TY+ L+   C++D   +
Sbjct: 182 KGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSE 241

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A +++ EM  + + P+  +  +++        + +A +YF  +     + D V+Y +++ 
Sbjct: 242 AKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMH 301

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           GY + GN+ EA+++  +++E+     ++ +N+++ G CK   + DA +L D +   G  P
Sbjct: 302 GYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALP 361

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
              T+TT ++ +C++GN+ + L+L   M  + I P  V Y  +I G CK  ++++A +L 
Sbjct: 362 DFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELW 421

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
           + M    + P+ ITY  +I ++C    + +AF+L + M    ++PT  T N +I G C +
Sbjct: 422 DGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRS 481

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           GD   AD  L  +    ++   ++Y T+I     E ++ KA  +  +M ++G    I  Y
Sbjct: 482 GDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITY 541

Query: 592 T--KSFFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
               + FC              M+  G  PD+     ++       +L   F     M++
Sbjct: 542 NVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQ 601

Query: 637 SGLLPD 642
            G  PD
Sbjct: 602 RGFAPD 607



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 225/448 (50%), Gaps = 5/448 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y R G++ +A  ++  M +  LK S+ TYN+++  L    R+      L + + +  +P 
Sbjct: 163 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 222

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
               N+++++  C++    +A     E   +   P +VS +++++ + +    + A   F
Sbjct: 223 TTTYNTLLVES-CRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYF 281

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M K+GL PD   Y +L+HG C  G+M EAL+  ++M   G   D I Y+ +  G    
Sbjct: 282 RDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKE 341

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             ++ A K+  +++ +G+ PD  T+T LI G+CQ GN+ + L L   M  +  K +++AY
Sbjct: 342 KMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAY 401

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   CK G +++A  L   M +  + P+ +TY ILI   C    V +A +L++ M  
Sbjct: 402 NTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIE 461

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K I P       ++ G C     ++A  +   +I      D + YN +I+G+V+  N+ +
Sbjct: 462 KGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDK 521

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A     ++ ++ + P I+T+N ++ GFC+ G++ +A  +L  +   G+ P   TYT  +N
Sbjct: 522 AFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALIN 581

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHV 449
            +  + N+        EM  +   P  V
Sbjct: 582 GHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 78/207 (37%), Gaps = 15/207 (7%)

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           ++ GL K   ++ A ++  ++   G+  +  T N ++ + CK          L++M  + 
Sbjct: 89  LLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNG 148

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           +     TYN LI   C  G L+ A  ++ S+ +  +  +   Y  II   C +G   +A 
Sbjct: 149 IYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAK 208

Query: 574 TFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAF 618
               +M+  G       Y                K  F  ML  G  PD      ++  F
Sbjct: 209 GILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVF 268

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDKFL 645
            +   L         M K GL+PD  +
Sbjct: 269 SRNRHLDQALVYFRDMKKFGLVPDNVI 295


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 170/555 (30%), Positives = 279/555 (50%), Gaps = 12/555 (2%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGL--FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           PS+ + NA++S   +         L  F  ++   LHP+ +++N+L+H  C  G++ +AL
Sbjct: 171 PSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 230

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
              + M   G+ PD +TY+ L K       +  A  ++ ++  +G  P   TY  L+  Y
Sbjct: 231 STLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAY 290

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL-KPD 272
            ++G +++   + E M + GF+ ++  Y+VL + +C++G++DEA  L  EME + +  PD
Sbjct: 291 ARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPD 350

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY+ L+    K  +   A+ L  EM  K +  +   H  ++ GLC +  + EA     
Sbjct: 351 VVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLK 410

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +       DV+ YN +ID Y K  N+ +A  L  +++   +     T N+L+Y  CK  
Sbjct: 411 MMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEK 470

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           +  +A  LL +    G  P  V+Y T M AY +E   +  L L  EM  + + P+  TY 
Sbjct: 471 RYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYN 530

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +IKGLC   KL EA+  L ++   G+ PD  TYN II ++CK  DL KAFQ  N+M  +
Sbjct: 531 TLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLEN 590

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
             +P   T N L++GLC++G L+ A  L  S  E    +  + Y T+I+A C +GDV  A
Sbjct: 591 YFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTA 650

Query: 573 MTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF---- 628
           + FF  M  +G +     +T +     LS       E  + ML    + G L   F    
Sbjct: 651 LHFFADMEARGLQPDA--FTYNVVLSALSEAG--RSEEAQNMLHKLDESGKLSERFSYPL 706

Query: 629 -ELAAVMIKSGLLPD 642
            + +A  +K+G  P+
Sbjct: 707 IKSSAEEVKTGKDPE 721



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 157/546 (28%), Positives = 269/546 (49%), Gaps = 7/546 (1%)

Query: 27  LKVSIQTYNSLLYNLRHT-----DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQD 81
           ++ S+Q  N++L  L  +         D++  +       N YT ++++   C +  L D
Sbjct: 169 VRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLAD 228

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           A+  L    G    P VV+ N ++  +C+ G    A+ L   M K G+ P   +YN L+ 
Sbjct: 229 ALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVS 288

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL-LIKGSD 200
                G +++A      M   G EPD  TY++LA G     ++  A+K+  ++  +    
Sbjct: 289 AYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVS 348

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           PD+VTY  L+    +     + L L E M  +G K +++ +++++  +C+ G+++EALG 
Sbjct: 349 PDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGR 408

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L  M   GL PD++TY+ LI   CK   V KA  L +EM    +  ++F    +L  LC+
Sbjct: 409 LKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCK 468

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
           ++   EA     S      + D V Y  ++  Y K      A+ L+ ++ +++++PSI T
Sbjct: 469 EKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYT 528

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +N+LI G C  GK+ +A   L+ +   GL P   TY   ++AYC+EG++++      +M 
Sbjct: 529 YNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKML 588

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
                P  VT   ++ GLC   KL++A++L E     G   D ITYNT+I++ CK  D+ 
Sbjct: 589 ENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVD 648

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
            A      M    L+P + TYN+++  L   G  + A  +L  L E      + +Y  +I
Sbjct: 649 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSY-PLI 707

Query: 561 KAHCAE 566
           K+   E
Sbjct: 708 KSSAEE 713



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 256/538 (47%), Gaps = 37/538 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T + ++   C++  L +A   L     +   P+  + N ++S Y +LG+ + A  + 
Sbjct: 244 DVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVV 303

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG-VEPDAITYS-------- 172
             M  +G  PD ++YN+L  GLC AG ++EA +  ++M     V PD +TY+        
Sbjct: 304 EAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFK 363

Query: 173 ---------------------------ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
                                      I+ KG     Q+  A   ++ +  +G  PD++T
Sbjct: 364 YQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVIT 423

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y  LI  YC+  NV +   L + M+  G K++    + LL ++CK  R +EA  LL    
Sbjct: 424 YNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPP 483

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G  PD V+Y  ++    K++K   A+ L++EM  ++++P+ + +  ++ GLC    +T
Sbjct: 484 QRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLT 543

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA    + L+    + D   YNI+I  Y K G++ +A Q + +++E    P +VT N+L+
Sbjct: 544 EAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLM 603

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G C +GK+  A +L ++    G +   +TY T + A C++G++   L    +ME + + 
Sbjct: 604 NGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQ 663

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P   TY VV+  L +  + +EA  +L  +   G   ++ +Y  I  S  + K  +     
Sbjct: 664 PDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVK 723

Query: 506 LNQMWLHNLEP-TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            +     N +     +YN  +  LCV G LK A  +L  + +  +S+    Y T+++ 
Sbjct: 724 SDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEG 781



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 220/492 (44%), Gaps = 18/492 (3%)

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           S LA+      Q S    V + L+     P+  T+ +L+  +C  G + + L     M  
Sbjct: 181 SALARSPSTSPQAS--LDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQG 238

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
            G   +V+ Y+ LL + C+ G + EA  LL  M+  G+ P   TY+ L+    +   + +
Sbjct: 239 FGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQ 298

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQDVVLYNIMI 350
           A  +   M +    P+ + +  +  GLC+   + EA    D +  +S    DVV YN ++
Sbjct: 299 ATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLV 358

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           D   K     +A+ L  ++ +K +  S+VT N ++ G C+ G++ +A   L  +   GL 
Sbjct: 359 DACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLA 418

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P  +TY T ++AYC+  N+ +   L+ EM    +     T   ++  LCK+ + +EA +L
Sbjct: 419 PDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEEL 478

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L      G  PD+++Y T++ ++ K      A  L ++M    L P+  TYN LI GLC 
Sbjct: 479 LRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCT 538

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI-- 588
            G L  A   L  L +  +      Y  II A+C EGD+ KA  F  +M+E  F+  +  
Sbjct: 539 IGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVT 598

Query: 589 -------------RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
                         +     F      G   D      ++ A  + GD+ +     A M 
Sbjct: 599 CNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADME 658

Query: 636 KSGLLPDKFLIN 647
             GL PD F  N
Sbjct: 659 ARGLQPDAFTYN 670



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 124/504 (24%), Positives = 220/504 (43%), Gaps = 40/504 (7%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIK-VS 57
           L   Y+R G +  A  V+  M     +  + TYN L   L      D  + L D+++ +S
Sbjct: 286 LVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLS 345

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +V T + ++D   +  R  DA+  L+E   K    S+V+ N ++   C+ G  E A
Sbjct: 346 IVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEA 405

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
            G   +M + GL PD  +YN LI   C A ++ +A    ++M R G++ D  T + L   
Sbjct: 406 LGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYN 465

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                +   A ++++    +G  PD V+Y  ++  Y +    E  L L + M  +    +
Sbjct: 466 LCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPS 525

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +  Y+ L+  +C  G++ EA+  L E+   GL PD  TY+I+I   CK+  + KA Q +N
Sbjct: 526 IYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHN 585

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M      P+      ++ GLC    + +A   F+S        DV+ YN +I    K G
Sbjct: 586 KMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDG 645

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG--------- 408
           ++  A+  +  +  + + P   T+N ++    + G+  +A+ +L  +   G         
Sbjct: 646 DVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYP 705

Query: 409 -LEPSAV--------------------------TYTTFMNAYCEEGNIQRLLALLQEMET 441
            ++ SA                           +Y   +   C  G ++   A+L EM  
Sbjct: 706 LIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQ 765

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQ 465
           K +     TY  +++GL K+ K Q
Sbjct: 766 KGMSVDSSTYITLMEGLIKRQKRQ 789


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 160/538 (29%), Positives = 284/538 (52%), Gaps = 6/538 (1%)

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG-SMEEALEFTNDMGRH 162
           ++  Y +L   + A  +  L   +G  P   SYN ++     +  ++  A     +M + 
Sbjct: 140 VVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQS 199

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
            V P+  TY+IL +GF L   +  A +   ++  KG  P++VTY  LI GYC++  +++G
Sbjct: 200 QVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDG 259

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
            +L   M  +G + N+I+Y+V+++ +C+ GR+ E   +L EM   G   D VTY+ LI+G
Sbjct: 260 FELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKG 319

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
            CK+   H+A+ ++ EM    +SP+   + +++  +C+   +  A  + D + +     +
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPN 379

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
              Y  ++DG+ + G + EA ++ +++I+   SPS+VT+N+LI G C  GK+ DA  +L+
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLE 439

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +K  GL P  V+Y+T ++ +C   ++   L + ++M  K I P  +TY+ +I+G C+Q 
Sbjct: 440 DMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQR 499

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           + +EA  L ++M  +G+ PD+ TY  +I ++C   DL+KA QL N+M    + P   TY+
Sbjct: 500 RTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYS 559

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           +LI+GL      + A  LL+ L       + V Y T+I+ +C+  +    ++       K
Sbjct: 560 VLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIE-NCSNIEFKSVVSLIKGFCMK 618

Query: 583 GFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           G            F  ML     PD     VM+    +GGD+   + L   M+KSG L
Sbjct: 619 GMMTE----ADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFL 672



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 152/571 (26%), Positives = 283/571 (49%), Gaps = 25/571 (4%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           V  +M +  +  ++ TYN L+       + D+    +D ++      NV T + +IDG C
Sbjct: 192 VFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYC 251

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +  ++ D    L+  A K   P+++S N +++  C+ G  +    +   M K G   D  
Sbjct: 252 KLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEV 311

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +YN LI G C  G+  +AL    +M RHG+ P  ITY+ L         ++ A + + ++
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQM 371

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
            ++G  P+  TYT L+ G+ Q G + E  ++ + M+  GF  +V+ Y+ L++  C +G++
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKM 431

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            +A+ +L +M+  GL PD+V+YS ++ G C+   V +A+++  +M +K I P++  + ++
Sbjct: 432 VDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSL 491

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G CE+    EA   FD ++      D   Y  +I+ Y   G++ +A+QL+ +++EK +
Sbjct: 492 IQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGV 551

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P +VT++ LI G  K  +  +A+RLL  +      PS VTY T +   C     + +++
Sbjct: 552 LPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVS 610

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L                   IKG C +  + EA Q+ E M      PD   YN +I   C
Sbjct: 611 L-------------------IKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHC 651

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS-LQEHNISLTK 553
           +  D+RKA+ L  +M        + T   L+  L   G +   + ++ + L+   +S  +
Sbjct: 652 RGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAE 711

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            A   +++ +  EG++   +    +M + GF
Sbjct: 712 QA-KVLVEINHREGNMDVVLDVLAEMAKDGF 741



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 211/405 (52%), Gaps = 16/405 (3%)

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK-VHKAIQLYNEMCSKRISPNSFAHG 312
           ID+AL +++  +A G  P +++Y+ ++    +  + +  A  ++ EM   ++SPN F + 
Sbjct: 150 IDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYN 209

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++ G C    +  A  +FD +    C+ +VV YN +IDGY KL  I +  +L R +  K
Sbjct: 210 ILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALK 269

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            + P+++++N +I G C+ G++ +   +L  +   G     VTY T +  YC+EGN  + 
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQA 329

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L +  EM    + P+ +TYT +I  +CK   +  A + L+ M V G+ P++ TY T++  
Sbjct: 330 LVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDG 389

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
           F +   + +A+++L +M  +   P+  TYN LI+G C+ G + +A  +L  ++E  ++  
Sbjct: 390 FSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPD 449

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFC 597
            V+Y+T++   C   DV +A+    +MV KG +     Y+                  F 
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFD 509

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            ML  G PPD+     ++ A+   GDL    +L   M++ G+LPD
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPD 554



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 156/347 (44%), Gaps = 53/347 (15%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRN 62
           Y + G  H A+ + A+M    L  S+ TY SL++++     M    +  D ++V     N
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPN 379

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + ++DG  Q+  + +A   L+E     F PSVV+ NA+++ +C  G    A  +  
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLE 439

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + GL PD  SY+ ++ G C +  ++EAL     M   G++PD ITYS L +GF    
Sbjct: 440 DMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQR 499

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A  +  ++L  G  PD  TYT LI  YC  G++++ ++L   M+ +G   +V+ YS
Sbjct: 500 RTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYS 559

Query: 243 VLLSSMCKSGRIDEA----LGLLYE----------------------------------- 263
           VL++ + K  R  EA    L L YE                                   
Sbjct: 560 VLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619

Query: 264 -----------MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
                      M     KPD   Y+++I G C+   + KA  LY EM
Sbjct: 620 MMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEM 666



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/281 (20%), Positives = 97/281 (34%), Gaps = 86/281 (30%)

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI---------------------- 484
           T   + +V+K   +   + +A+ ++      G  P  +                      
Sbjct: 133 TSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 485 --------------TYNTIIRSFCKCKDLRKAFQLLNQM--------------------- 509
                         TYN +IR FC   +L  A +  ++M                     
Sbjct: 193 FKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCK 252

Query: 510 --------------WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
                          L  LEP   +YN++I+GLC  G +K    +L  + +   SL +V 
Sbjct: 253 LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMML 600
           Y T+IK +C EG+ H+A+    +M+  G   S+  YT                 F   M 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
             G  P++     ++  F Q G +   + +   MI +G  P
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSP 413


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  288 bits (736), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 263/486 (54%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           +LN ++  YCK    +    +   M K  + PD  ++N+++     AG  E A+   + M
Sbjct: 97  TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 156

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              G++P  +TY+ + KG         AW+V +++   G  PD+ ++T+LI G+C++G +
Sbjct: 157 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 216

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           EE LK+ + M  +G K +++++S L+    + G++D A+  L EM   GL PD V Y+++
Sbjct: 217 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I G C+   +  A+++ +EM      P+   +  +L GLC++  + +A    + +     
Sbjct: 277 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 336

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             D+  +  +I GY   G + +A+QL+  ++ +R+ P IVT+N+LI G C+ G +  A  
Sbjct: 337 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 396

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L D +    + P+ VTY+  ++++CE+G ++     L EM  K I P  +TY  +IKG C
Sbjct: 397 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 456

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           +   + +  + L+ M V  V+PD ITYNT+I  + K   +  AF+LLN M    ++P   
Sbjct: 457 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVV 516

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYN+LI+G  V+G+++ A  +   +    I   +  Y ++I  H   G+  +A     +M
Sbjct: 517 TYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 576

Query: 580 VEKGFE 585
           +++G E
Sbjct: 577 LQRGKE 582



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 254/459 (55%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T+++++D   +    + A+  +     K   P +V+ N+++   C+ G  + A  +F
Sbjct: 129 DVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF 188

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M  +G+ PD  S+ ILI G C  G +EEAL+   +M   G++PD +++S L   F   
Sbjct: 189 KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR 248

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A   ++++   G  PD V YT++I G+C+ G + + L++R+ M+  G   +V+ Y
Sbjct: 249 GKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTY 308

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL+ +CK  R+ +A GLL EM   G+ PDL T++ LI G C + K+ KA+QL++ M +
Sbjct: 309 NTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN 368

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +R+ P+   +  ++ G+C +  + +A   +D +       + V Y+I+ID + + G + +
Sbjct: 369 QRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVED 428

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A     ++I K I P+I+T+NS+I G+C++G V+  ++ L  + ++ + P  +TY T ++
Sbjct: 429 AFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIH 488

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            Y +E  +     LL  ME + + P  VTY ++I G      +QEA  + E M   G+ P
Sbjct: 489 GYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEP 548

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
           D+ TY ++I       + ++AFQL ++M     E   A 
Sbjct: 549 DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAA 587



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 253/489 (51%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           D Y  +  S +  N YT +I++   C+          + E   +   P VV+ N ++   
Sbjct: 81  DAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDAR 140

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
            + G AE A  L   M+  GL P   +YN ++ GLC +G  ++A E   +M   GV PD 
Sbjct: 141 FRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDV 200

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
            +++IL  GF  + +I  A K+ +++  +G  PD+V+++ LI  + + G ++  +     
Sbjct: 201 RSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE 260

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   G   + + Y++++   C++G + +AL +  EM   G  PD+VTY+ L+ GLCK+ +
Sbjct: 261 MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 320

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           +  A  L NEM  + + P+      ++ G C +  + +A   FD+++      D+V YN 
Sbjct: 321 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 380

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDG  + G++ +A  L+  +  + I P+ VT++ LI   C+ G+V DA   LD +   G
Sbjct: 381 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKG 440

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P+ +TY + +  YC  GN+ +    LQ+M    + P  +TY  +I G  K+ K+ +A 
Sbjct: 441 ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAF 500

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +LL  M    V PD +TYN +I  F    ++++A  +  +M    +EP   TY  +I+G 
Sbjct: 501 KLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGH 560

Query: 529 CVNGDLKNA 537
              G+ K A
Sbjct: 561 VTAGNSKEA 569



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 251/476 (52%)

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           + G+  +A   + L+       + ++ NI++H  C A   ++     ++M +  V PD +
Sbjct: 72  RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 131

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           T++++            A  ++  ++ KG  P IVTY  ++ G C+ G  ++  ++ + M
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 191

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
              G   +V ++++L+   C+ G I+EAL +  EM   G+KPDLV++S LI    ++ K+
Sbjct: 192 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 251

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             A+    EM    + P+   +  ++ G C   ++++A    D ++   C+ DVV YN +
Sbjct: 252 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 311

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           ++G  K   + +A  L  ++ E+ + P + TF +LI+G+C  GK+  A +L DT+    L
Sbjct: 312 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 371

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P  VTY T ++  C +G++ +   L  +M ++ I P HVTY+++I   C++ ++++A  
Sbjct: 372 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 431

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
            L++M   G+ P+ +TYN+II+ +C+  ++ K  + L +M ++ + P   TYN LI G  
Sbjct: 432 FLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYI 491

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
               + +A  LL  +++  +    V Y  +I      G+V +A   F +M  KG E
Sbjct: 492 KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE 547



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 209/431 (48%), Gaps = 15/431 (3%)

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
            ++ S   ++N    ++++ + CK+   D+   ++ EME   + PD+VT+++++    + 
Sbjct: 84  RLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRA 143

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
                A+ L + M SK + P    + ++L GLC   M  +A   F  +       DV  +
Sbjct: 144 GDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSF 203

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
            I+I G+ ++G I EA+++Y+++  + I P +V+F+ LI  F + GK+  A   L  ++ 
Sbjct: 204 TILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC 263

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            GL P  V YT  +  +C  G +   L +  EM      P  VTY  ++ GLCK+ +L +
Sbjct: 264 FGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD 323

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A  LL +M   GV PD  T+ T+I  +C    L KA QL + M    L P   TYN LID
Sbjct: 324 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 383

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG--- 583
           G+C  GDL  A+ L   +    I    V Y+ +I +HC +G V  A  F  +M+ KG   
Sbjct: 384 GMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 443

Query: 584 ----FEISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
               +   I+ Y +S        F   M+ N   PD      ++  + +   +   F+L 
Sbjct: 444 NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 503

Query: 632 AVMIKSGLLPD 642
            +M K  + PD
Sbjct: 504 NMMEKEKVQPD 514



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 220/453 (48%), Gaps = 39/453 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVY 64
           R G    A+ ++  M    LK  I TYNS+L  L  +   D  W+++ ++       +V 
Sbjct: 142 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 201

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           + +I+I G C+   +++A+   +E   +   P +VS + ++  + + G  + A      M
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 261

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             +GL PD   Y ++I G C AG M +AL   ++M   G  PD +TY+ L  G     ++
Sbjct: 262 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 321

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  ++ ++  +G  PD+ T+T LI GYC  G +++ L+L + ML+Q  + +++ Y+ L
Sbjct: 322 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 381

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  MC+ G +D+A  L  +M +  + P+ VTYSILI   C++ +V  A    +EM +K I
Sbjct: 382 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 441

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYF-----------------------------DSLI 335
            PN   + +I+ G C    +++ + +                              D+  
Sbjct: 442 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 501

Query: 336 MSNCIQ------DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
           + N ++      DVV YN++I+G+   GN+ EA  ++ ++  K I P   T+ S+I G  
Sbjct: 502 LLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHV 561

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTT-FMN 421
             G   +A +L D +   G E      T  F+N
Sbjct: 562 TAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFVN 594



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 171/380 (45%), Gaps = 71/380 (18%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + R G++ DA+ V  +M        + TYN+LL                           
Sbjct: 280 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLL--------------------------- 312

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
                +GLC++ RL DA   L E   +   P + +   ++  YC  G  + A  LF  ML
Sbjct: 313 -----NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 367

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
              L PD  +YN LI G+C  G +++A +  +DM    + P+ +TYSIL        Q+ 
Sbjct: 368 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 427

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A+  + +++ KG  P+I+TY  +I GYC+ GNV +G K  + M+      ++I Y+ L+
Sbjct: 428 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 487

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
               K  ++ +A  LL  ME   ++PD+VTY++LI G      V +A  ++ +MC+K I 
Sbjct: 488 HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE 547

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+ +                                    Y  MI+G+V  GN  EA QL
Sbjct: 548 PDRYT-----------------------------------YMSMINGHVTAGNSKEAFQL 572

Query: 366 YRQLI----EKRISPSIVTF 381
           + +++    EKR +   V F
Sbjct: 573 HDEMLQRGKEKRRAAGTVQF 592



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 147/329 (44%), Gaps = 33/329 (10%)

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           G C +E+++       SL+ S+      +++++I  Y +     EA + +R +++ R+  
Sbjct: 6   GACRREIVS-------SLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPI 58

Query: 377 SIVTFNSLIYGFCKNGK---VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
                N+L+    + G     ADA RL+ +      E +  T    ++ YC+     ++ 
Sbjct: 59  PAAASNALLAALSRAGWPHLAADAYRLVFS---SNSEVNTYTLNIMVHNYCKALEFDKVD 115

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           A++ EME + + P  VT+ V++    +    + A+ L++ M   G+ P  +TYN++++  
Sbjct: 116 AVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGL 175

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C+     KA+++  +M    + P   ++ ILI G C  G+++ A  +   ++   I    
Sbjct: 176 CRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDL 235

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
           V+++ +I      G +  AM +  +M             + F       G  PD  I  +
Sbjct: 236 VSFSCLIGLFARRGKMDHAMAYLREM-------------RCF-------GLVPDGVIYTM 275

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           ++  F + G +     +   M+  G LPD
Sbjct: 276 VIGGFCRAGLMSDALRVRDEMVGCGCLPD 304


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 162/531 (30%), Positives = 287/531 (54%), Gaps = 4/531 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKE-LDLKVSIQTYNSLLYNLRHTDIMW--DLYDDIKVSETPR- 61
           Y++  +  +AV V+  M+E   LK+   TYN LL  L   + +   ++ +   VS   + 
Sbjct: 150 YAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKP 209

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T +I+I  LC+  +++ AIL ++E       P   +   +M  + + G    A  + 
Sbjct: 210 DVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIR 269

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G      + N+L+HG C  G +EE L F ++M   G  PD  T++ L  G   +
Sbjct: 270 EQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRI 329

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A +++  +L +G DPDI TY  LI G C++G VEE +++   M+ + F  N + Y
Sbjct: 330 GHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTY 389

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+S++CK  +++EA  L   + + G+ PD+ T++ LI+GLC  +    A++L+ EM +
Sbjct: 390 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKT 449

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   P+ F +  ++  LC +  + EA      +  S C ++VV YN +IDG+ K   I E
Sbjct: 450 KGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEE 509

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +++ ++  + IS ++VT+N+LI G CKN +V +A +L+D + + GL+P   TY + + 
Sbjct: 510 AEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLT 569

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C  G+I++   ++Q M +    P  VTY  +I GL K  +++ A +LL  + + G+  
Sbjct: 570 YFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVL 629

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
              TYN +I++  + K   +A +L  +M      P + TY ++  GLC  G
Sbjct: 630 APQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGG 680



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 161/520 (30%), Positives = 267/520 (51%), Gaps = 21/520 (4%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G+ PD  ++NILI  LC A  +  A+    +MG +G+ PD  T++ L +GF     
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGN 261

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           ++GA ++ ++++  G     VT  VL+ GYC+ G +EE L   + M ++GF+ +   ++ 
Sbjct: 262 MNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNS 321

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++ +C+ G +  AL +L  M   G  PD+ TY+ LI GLCK  +V +A+++ N+M  + 
Sbjct: 322 LVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRD 381

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            SPN+  +  ++  LC++  + EA      L     + DV  +N +I G     N   A+
Sbjct: 382 FSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAM 441

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L+ ++  K   P   T+N LI   C  G++ +A  LL  ++  G   + VTY T ++ +
Sbjct: 442 ELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGF 501

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+   I+    +  EME + I    VTY  +I GLCK  +++EA QL++ M + G+ PD+
Sbjct: 502 CKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDK 561

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            TYN+++  FC+  D++KA  ++  M  +  EP S TY  LI GL   G ++ A  LL +
Sbjct: 562 FTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRT 621

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           +Q   + L    Y  +IKA   E    +A+  F +M+EK                    G
Sbjct: 622 VQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEK--------------------G 661

Query: 604 FPPDQEICEVMLIAF-HQGGDLGSVFELAAVMIKSGLLPD 642
            PPD    +V+       GG +G   +    M   G LPD
Sbjct: 662 DPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPD 701



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 187/386 (48%), Gaps = 4/386 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           R G V  A+ ++  M +      I TYNSL++    L   +   ++ + + + +   N  
Sbjct: 328 RIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTV 387

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I  LC+++++++A    +    K   P V + N+++   C      +A  LF  M
Sbjct: 388 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEM 447

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G HPD F+YN+LI  LC  G +EEAL    +M   G   + +TY+ L  GF    +I
Sbjct: 448 KTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRI 507

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++  ++ ++G   ++VTY  LI G C+   VEE  +L + ML +G K +   Y+ L
Sbjct: 508 EEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSL 567

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L+  C++G I +A  ++  M + G +PD VTY  LI GL K  +V  A +L   +  K +
Sbjct: 568 LTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGM 627

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN-IGEAV 363
                 +  ++  L  ++  +EA   F  ++      D V Y ++  G    G  IGEAV
Sbjct: 628 VLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAV 687

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFC 389
               ++ +K   P   +F  L  G C
Sbjct: 688 DFLVEMTDKGFLPDFSSFLMLAEGLC 713



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 139/306 (45%), Gaps = 39/306 (12%)

Query: 33  TYNSLLYNLRHTD---IMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           T+NSL+  L  T+   +  +L++++K      + +T +++ID LC + RL++A+  L+E 
Sbjct: 423 TFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEM 482

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                  +VV+ N ++  +CK    E A+ +F  M   G+  +  +YN LI GLC    +
Sbjct: 483 ESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRV 542

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           EEA +  + M   G++PD  TY+ L   F     I  A  ++Q +   G +PD VTY  L
Sbjct: 543 EEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTL 602

Query: 210 ICGYCQIGNVE-----------------------------------EGLKLREVMLSQGF 234
           I G  + G VE                                   E ++L   M+ +G 
Sbjct: 603 ILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGD 662

Query: 235 KLNVIAYSVLLSSMCKSG-RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
             + + Y V+   +C  G  I EA+  L EM   G  PD  ++ +L  GLC        I
Sbjct: 663 PPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLI 722

Query: 294 QLYNEM 299
           +L N +
Sbjct: 723 KLVNRV 728



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/322 (21%), Positives = 144/322 (44%), Gaps = 18/322 (5%)

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
           N +   V+Y  ++    K G+ G   ++ +++          TF  LI  + K     +A
Sbjct: 100 NFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEA 159

Query: 398 RRLLDTIKLH-GLEPSAVTYTTFMNAYCEEGNIQRLLALLQ-EMETKAIGPTHVTYTVVI 455
             ++D ++   GL+  A TY   +N   + GN  +L+ ++   M ++ I P   T+ ++I
Sbjct: 160 VAVVDIMEEEFGLKLDAFTYNFLLNVLVD-GNKLKLVEIVNSRMVSRGIKPDVTTFNILI 218

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           K LC+  +++ A+ ++E+M   G++PD+ T+ T+++ F +  ++  A ++  QM      
Sbjct: 219 KALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCP 278

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
            ++ T N+L+ G C  G ++     +  +        +  + +++   C  G V  A+  
Sbjct: 279 SSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEI 338

Query: 576 FCQMVEKGFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAFHQ 620
              M+++GF+  I  Y    F +               M+   F P+      ++    +
Sbjct: 339 LDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCK 398

Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
              +    ELA V+   G+LPD
Sbjct: 399 ENQVEEATELARVLTSKGILPD 420



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 116/263 (44%), Gaps = 39/263 (14%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G + +A+ ++ +M+      ++ TYN+L+      +  +   +++D++++    RNV T 
Sbjct: 470 GRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTY 529

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +IDGLC+  R+++A   + +   +   P   + N++++ +C+ G  + A  +   M  
Sbjct: 530 NTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTS 589

Query: 127 YGLHPDAFSYNILIHGLCIAGSME-----------------------------------E 151
            G  PD+ +Y  LI GL  AG +E                                   E
Sbjct: 590 NGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSE 649

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGF-HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           A+    +M   G  PDA+TY ++ +G       I  A   + ++  KG  PD  ++ +L 
Sbjct: 650 AVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLA 709

Query: 211 CGYCQIGNVEEGLKLREVMLSQG 233
            G C +   +  +KL   ++ Q 
Sbjct: 710 EGLCALSMEDTLIKLVNRVMKQA 732



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 21/273 (7%)

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           PS V +  ++    K+G     RR+L  +K  G E    T+   + +Y +       +A+
Sbjct: 103 PSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAV 162

Query: 436 LQEMETK-AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +  ME +  +     TY  ++  L    KL+    +   M   G+ PD  T+N +I++ C
Sbjct: 163 VDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALC 222

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           +   +R A  ++ +M  + L P   T+  L+ G    G++  A  +   +       + V
Sbjct: 223 RAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNV 282

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
               ++  +C EG + + ++F  +M                     + GF PD+     +
Sbjct: 283 TVNVLVHGYCKEGRIEEVLSFIDEMS--------------------NEGFRPDRFTFNSL 322

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +    + G +    E+  VM++ G  PD F  N
Sbjct: 323 VNGLCRIGHVKHALEILDVMLQEGFDPDIFTYN 355



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 6/216 (2%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLL-YNLRHTDI--MWDLYDDIKVSETPRNVYTNSI 68
           V +A  ++ +M    LK    TYNSLL Y  R  DI    D+   +  +    +  T   
Sbjct: 542 VEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGT 601

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I GL +  R++ A   L+    K    +  + N ++    +      A  LF  M++ G
Sbjct: 602 LILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKG 661

Query: 129 LHPDAFSYNILIHGLCIAG-SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
             PDA +Y ++  GLC  G  + EA++F  +M   G  PD  ++ +LA+G   LS     
Sbjct: 662 DPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTL 721

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
            K++ +++ + +  D  +   +I G+ +I   ++ L
Sbjct: 722 IKLVNRVMKQANFSD--SEVSMIMGFLKIRKFQDAL 755


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 168/616 (27%), Positives = 299/616 (48%), Gaps = 39/616 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           Y R G + +AV    +M   +   S+ +YN++   L    + +    +Y  +K  +   +
Sbjct: 165 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD 224

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQE-----------------TAGKEFG---------- 95
           VYT +I I   C+  R   A+  L+                  T   EFG          
Sbjct: 225 VYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD 284

Query: 96  --------PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
                   P V + N ++   CK GF   ++ LF  +LK G+ P+ F++NI I GLC  G
Sbjct: 285 EMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG 344

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           S++ A+     + R G+ PD +TY+ +  G    S++  A + + K++  G +P+  TY 
Sbjct: 345 SLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYN 404

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            +I GYC+ G V +  ++ +  + +GFK +   Y  L++  C+ G  D+A+ +  +    
Sbjct: 405 SIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGK 464

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL+P ++ Y+ LI+GLC+Q  +  A+QL NEM  K   P+ + +  I+ GLC+   +++A
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                  I   CI D+  YN ++DGY +   +  A++L  ++  + ++P ++T+N+L+ G
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNG 584

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK  K  +   +   +   G  P+ +TY T + + C    +   + LL EM++K + P 
Sbjct: 585 LCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 644

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDM-YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
            V++  +I G CK   L  A  L   M     V+    TYN II +F +  +++ A +L 
Sbjct: 645 VVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLF 704

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           ++M  +  +P + TY +LIDG C  G++      L+   E     +   +  ++   C E
Sbjct: 705 SEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVE 764

Query: 567 GDVHKAMTFFCQMVEK 582
             V +A+     MV+K
Sbjct: 765 HKVQEAVGIIHLMVQK 780



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 156/584 (26%), Positives = 282/584 (48%), Gaps = 18/584 (3%)

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           ++ ++Q+A+   +        PSV S NAIM+   + G+   A  ++  M    +  D +
Sbjct: 167 RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVY 226

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +Y I I   C  G    AL    +M   G   +A+ Y  +  GF+       A ++  ++
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           L     PD+ T+  L+   C+ G V E  +L + +L +G   N+  +++ +  +CK G +
Sbjct: 287 LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D A+ LL  +   GL+PD+VTY+ +I GLC++ +V +A +  ++M +    PN F + +I
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G C+K M+ +A       +      D   Y  +++G+ + G+  +A+ +++  + K +
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            PSI+ +N+LI G C+ G +  A +L++ +   G +P   TY   +N  C+ G +     
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANH 526

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L+ +  TK   P   TY  ++ G C+Q KL  A++L+  M+  G+TPD ITYNT++   C
Sbjct: 527 LIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLC 586

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K     +  ++   M      P   TYN +I+ LC +  +  A  LL  ++   ++   V
Sbjct: 587 KTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVV 646

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS-----------------FFC 597
           ++ T+I   C  GD+  A   F  M EK +++S    T +                  F 
Sbjct: 647 SFGTLITGFCKVGDLDGAYGLFRGM-EKQYDVSHTTATYNIIISAFSEQLNMKMALRLFS 705

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            M  NG  PD     V++  F + G++   ++     I+ G +P
Sbjct: 706 EMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIP 749



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/556 (26%), Positives = 262/556 (47%), Gaps = 16/556 (2%)

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           M  Y + G  + A   F  M  +   P  +SYN +++ L   G   +A +    M    V
Sbjct: 162 MRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKV 221

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
           E D  TY+I  K F    +   A ++++ + + G   + V Y  ++ G+ + G+ +   +
Sbjct: 222 ESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARE 281

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L + ML      +V  ++ L+ ++CK G + E+  L  ++   G+ P+L T++I I+GLC
Sbjct: 282 LFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLC 341

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K+  + +A++L   +  + + P+   +  ++ GLC K  + EA      ++      +  
Sbjct: 342 KEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDF 401

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            YN +IDGY K G + +A ++ +  + K   P   T+ SL+ GFC++G    A  +    
Sbjct: 402 TYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDG 461

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              GL PS + Y T +   C++G I   L L+ EM  K   P   TY ++I GLCK   L
Sbjct: 462 LGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCL 521

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            +A  L+ D    G  PD  TYNT++  +C+   L  A +L+N+MW   + P   TYN L
Sbjct: 522 SDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTL 581

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           ++GLC     +    +  ++ E   +   + Y TII++ C    V++A+    +M  KG 
Sbjct: 582 LNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGL 641

Query: 585 EISIRDYTK--SFFCMM--------LSNGFPPDQEICE------VMLIAFHQGGDLGSVF 628
              +  +    + FC +        L  G     ++        +++ AF +  ++    
Sbjct: 642 TPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMAL 701

Query: 629 ELAAVMIKSGLLPDKF 644
            L + M K+G  PD +
Sbjct: 702 RLFSEMKKNGCDPDNY 717



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 185/398 (46%), Gaps = 20/398 (5%)

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           + G+I EA+     M+     P + +Y+ ++  L +    ++A ++Y  M  K++  + +
Sbjct: 167 RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVY 226

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            +   +   C       A     ++ +  C  + V Y  ++ G+ + G+   A +L+ ++
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           +E  + P + TFN L++  CK G V ++ RL D +   G+ P+  T+  F+   C+EG++
Sbjct: 287 LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
            R + LL  +  + + P  VTY  VI GLC++ ++ EA + L  M   G  P+  TYN+I
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I  +CK   +  A ++L        +P   TY  L++G C +GD   A  +        +
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
             + + Y T+IK  C +G +  A+    +M EKG +  I  Y       ++ NG      
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYN------LIING------ 514

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +C++        G L     L    I  G +PD F  N
Sbjct: 515 LCKM--------GCLSDANHLIGDAITKGCIPDIFTYN 544



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 139/307 (45%), Gaps = 39/307 (12%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           + G++  A+ ++ +M E   K  I TYN ++  L     + D   L  D        +++
Sbjct: 482 QQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIF 541

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + ++DG C+Q +L  AI  +     +   P V++ N +++  CK   +E    +F  M
Sbjct: 542 TYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAM 601

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G  P+  +YN +I  LC +  + EA++   +M   G+ PD +++  L  GF  +  +
Sbjct: 602 TEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDL 661

Query: 185 SGAW------------------------------------KVIQKLLIKGSDPDIVTYTV 208
            GA+                                    ++  ++   G DPD  TY V
Sbjct: 662 DGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRV 721

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI G+C+ GNV +G K     + +GF  ++  +  +L+ +C   ++ EA+G+++ M    
Sbjct: 722 LIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKD 781

Query: 269 LKPDLVT 275
           + PD V 
Sbjct: 782 IVPDTVN 788



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/305 (20%), Positives = 114/305 (37%), Gaps = 31/305 (10%)

Query: 368 QLIEKR---ISPSIVTFNSLIYGFCKNGK-------VADARRLLDTIKLHGLEPSAVTYT 417
           QLI+K       ++ T+ S++     +GK       +++ R  LD   L G+      Y 
Sbjct: 106 QLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGV------YV 159

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             M  Y  +G IQ  +   + M+     P+  +Y  ++  L +     +A ++   M   
Sbjct: 160 EAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDK 219

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
            V  D  TY   I+SFC+      A +LL  M +      +  Y  ++ G    GD   A
Sbjct: 220 KVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRA 279

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIR- 589
             L   + E  +      +  ++ A C +G V ++   F +++++G       F I I+ 
Sbjct: 280 RELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQG 339

Query: 590 -------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                  D        +   G  PD      ++    +   +    E    M+  G  P+
Sbjct: 340 LCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPN 399

Query: 643 KFLIN 647
            F  N
Sbjct: 400 DFTYN 404


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 176/601 (29%), Positives = 315/601 (52%), Gaps = 23/601 (3%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVYTNSIV 69
           +A  +  +MK   +   + +Y SL++    +   W+    L++++       +V T+S++
Sbjct: 139 EARELFKEMKAQGMMPDVISYTSLIHGFCRSG-KWEKAKCLFNEMLDVGIRSDVTTSSML 197

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           ID LC++ ++ +A   L+    +     +V+ + ++   C       A  LF  M K G 
Sbjct: 198 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGC 257

Query: 130 HPDAFSYNILIHGLCIAGSMEEAL----EFTNDMGRHGVE--PDAITYSILAKGFHLLSQ 183
            PDA +Y  L+ GLC  G++  AL    E  ND GR+G++  P  I+YSI+  G     +
Sbjct: 258 RPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 317

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A ++ +++  +G  PD+++YT LI G+C  G  E+   L   ML  G + +V   SV
Sbjct: 318 EDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSV 377

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +CK G++ EA  LL  +   G  PD+VT + L++GLC + ++ KA QL+ +M    
Sbjct: 378 LIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 437

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS------NCIQDVVLYNIMIDGYVKLG 357
             PN      ++ GLC+   I  A     +++        NC  + + Y+I+IDG  K G
Sbjct: 438 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 497

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
              EA +L++++    + P ++++ SLI+GFC++GK  DA+ L + +   G++P   T++
Sbjct: 498 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 557

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++  C+EG +     LL+ M  +   P  VTYT ++KGLC   ++ EA QL   M  +
Sbjct: 558 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 617

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM------WLHNLEPTSATYNILIDGLCVN 531
           G  PD +TY T+++  C+  +++ A +L  +M      +  N +P   +Y+I+IDGLC +
Sbjct: 618 GCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKH 677

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           G    A  L   ++   +    ++YT++I   C  G +  A   F +MV++G +++   Y
Sbjct: 678 GREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTY 737

Query: 592 T 592
           +
Sbjct: 738 S 738



 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 169/575 (29%), Positives = 274/575 (47%), Gaps = 53/575 (9%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T S +I GLC + R+ +A             P  ++   +M   C+ G   +A  L 
Sbjct: 44  DIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLH 103

Query: 122 CLML----KYGLH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
             ML    +YG+   P   SY+I+I GLC     +EA E   +M   G+ PD I+Y+ L 
Sbjct: 104 QEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLI 163

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            GF    +   A  +  ++L  G   D+ T ++LI   C+ G V E  +L EVM+ +G  
Sbjct: 164 HGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCI 223

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           L+++ YS L+  +C   RI EA  L   M+ +G +PD + Y  L++GLC+   ++ A+QL
Sbjct: 224 LDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQL 283

Query: 296 YNEMCSK------RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
           + EM +       +  P   ++  I+ GLC+     EAR  F  +     + DV+ Y  +
Sbjct: 284 HQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTL 343

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           I G+   G   +A  L+ ++++  I P + T + LI   CK GKV +A +LL+ +   G 
Sbjct: 344 IHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGC 403

Query: 410 EPSAVTYT-----------------------------------TFMNAYCEEGNIQRLLA 434
            P  VT T                                   T M   C+ GNI+  L 
Sbjct: 404 IPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALE 463

Query: 435 LLQEM--ETKAIG----PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           L + M  +T   G    P  ++Y+++I GLCK  +  EA +L ++M  +GV PD I+Y +
Sbjct: 464 LHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTS 523

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I  FC+    + A  L N+M    ++P   T+++LID LC  G +  A+ LL  + +  
Sbjct: 524 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 583

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
                V YTT++K  C    + +A   F +M + G
Sbjct: 584 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLG 618



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 162/559 (28%), Positives = 286/559 (51%), Gaps = 23/559 (4%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           ML  +  + G V +A  ++  M +    + I TY++L+  L    R ++         K+
Sbjct: 196 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKL 255

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA------GKEFGPSVVSLNAIMSRYCK 110
              P  +   ++ + GLCQ   +  A+   QE        G +  P+++S + I+   CK
Sbjct: 256 GCRPDAIAYGTL-MKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 314

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
               + A+ LF  M   G+ PD  SY  LIHG C++G  E+A    N+M   G++PD  T
Sbjct: 315 DRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 374

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
            S+L        ++  A K+++ ++ +G  PD+VT T L+ G C    + +  +L   M 
Sbjct: 375 SSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQ 434

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA------VGLKPDLVTYSILIRGLC 284
             G   NV+  + L+  +C+SG I  AL L   M +      +  KP+ ++YSI+I GLC
Sbjct: 435 KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLC 494

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K  +  +A +L+ EM +  + P+  ++ +++ G C      +A+  F+ ++      DV 
Sbjct: 495 KCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 554

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            ++++ID   K G + EA +L   +I++   P+ VT+ +L+ G C N ++++A +L   +
Sbjct: 555 TFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKM 614

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM--ETKAIG----PTHVTYTVVIKGL 458
           +  G  P  VTY T M   C+ GNI+  L L ++M  +T   G    P  ++Y+++I GL
Sbjct: 615 QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGL 674

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK  +  EA +L ++M  +GV P+ I+Y ++I  FC+   L  A  L N+M    ++  +
Sbjct: 675 CKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNA 734

Query: 519 ATYNILIDGLCVNGDLKNA 537
            TY+++I G C  G +  A
Sbjct: 735 VTYSVMIHGFCKEGQIDKA 753



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 165/599 (27%), Positives = 298/599 (49%), Gaps = 38/599 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T+ ++ID  C++ ++ +A   L+    +     +V+ + ++   C       A  LF
Sbjct: 9   DVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLF 68

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL----EFTNDMGRHGV--EPDAITYSILA 175
             M K G  PDA +Y  L+ GLC  G +  AL    E  ND  ++G+  +P  ++YSI+ 
Sbjct: 69  MSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIII 128

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            G     +   A ++ +++  +G  PD+++YT LI G+C+ G  E+   L   ML  G +
Sbjct: 129 DGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIR 188

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +V   S+L+  +CK G++ EA  LL  M   G   D+VTYS LI+GLC + ++ +A +L
Sbjct: 189 SDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRL 248

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN------CIQDVVLYNIM 349
           +  M      P++ A+G ++ GLC+   I  A      ++         C   ++ Y+I+
Sbjct: 249 FMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSII 308

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           IDG  K     EA +L++++  + I P ++++ +LI+GFC +GK   A+ L + +   G+
Sbjct: 309 IDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGI 368

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           +P   T +  ++  C++G +     LL+ +  +   P  VT T ++KGLC + ++ +A Q
Sbjct: 369 QPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQ 428

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM------WLHNLEPTSATYNI 523
           L   M  +G  P+ +T  T+++  C+  +++ A +L   M      +  N +P + +Y+I
Sbjct: 429 LFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSI 488

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +IDGLC  G    A  L   ++   +    ++YT++I   C  G    A   F +MV+ G
Sbjct: 489 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 548

Query: 584 FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            +                    PD     V++    + G +    EL  VMI+ G +P+
Sbjct: 549 VQ--------------------PDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPN 587



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 256/514 (49%), Gaps = 58/514 (11%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPR------- 61
           + +A  +   M++L  +     Y +L+  L  T   +    L+ ++ +++T R       
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEM-LNDTGRYGIKCKP 300

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            + + SI+IDGLC+  R  +A    +E   +   P V+S   ++  +C  G  E AK LF
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  G+ PD  + ++LI  LC  G + EA +    + + G  PD +T + L KG  + 
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMK 420

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ------GFK 235
            +IS A ++  K+   G  P++VT   L+ G CQ GN++  L+L + MLS         K
Sbjct: 421 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCK 480

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            N I+YS+++  +CK GR DEA  L  EM+A+G+ PD+++Y+ LI G C+  K   A  L
Sbjct: 481 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 540

Query: 296 YNEMCSKRISP-----------------------------------NSFAHGAILLGLCE 320
           +NEM    + P                                   N+  +  ++ GLC 
Sbjct: 541 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 600

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK------RI 374
            + I+EA   F  +    C+ DVV Y  ++ G  + GNI  A++L+++++          
Sbjct: 601 NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNF 660

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P +++++ +I G CK+G+  +AR L   +K  G+ P+ ++YT+ ++ +C  G ++    
Sbjct: 661 KPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKH 720

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L  EM  + +    VTY+V+I G CK+ ++ +A+
Sbjct: 721 LFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 227/485 (46%), Gaps = 67/485 (13%)

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  PD+ T  VLI  +C+ G V E  +L EVM+ +G  L+++ YS L+  +C   RI EA
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK------RISPNSFAH 311
             L   M+ +G +PD + Y  L++GLC+  K++ A+ L+ EM +       +  P   ++
Sbjct: 65  TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY------------------ 353
             I+ GLC+     EAR  F  +     + DV+ Y  +I G+                  
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184

Query: 354 -----------------VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                             K G + EA +L   +I++     IVT+++LI G C   ++++
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISE 244

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM--ETKAIG----PTHVT 450
           A RL  +++  G  P A+ Y T M   C+ GNI   L L QEM  +T   G    PT ++
Sbjct: 245 ATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLIS 304

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y+++I GLCK  +  EA +L ++M   G+ PD I+Y T+I  FC      KA  L N+M 
Sbjct: 305 YSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 364

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              ++P   T ++LID LC  G +  A+ LL  + +       V  TT++K  C +  + 
Sbjct: 365 DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRIS 424

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
           KA   F +M + G             CM       P+   C  ++    Q G++    EL
Sbjct: 425 KATQLFLKMQKLG-------------CM-------PNVVTCATLMKGLCQSGNIKIALEL 464

Query: 631 AAVMI 635
              M+
Sbjct: 465 HKNML 469


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 161/579 (27%), Positives = 306/579 (52%), Gaps = 31/579 (5%)

Query: 94  FGPSVVSLNAIMSRYCKLGFA-EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           F P V+S NAI+    +   + ++A+G+F  M++ G+ P+ ++YNILI G C AG++E  
Sbjct: 163 FMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           L F  +M R+G  P+ +TY+ +   +  L +I  A+K+++ + +KG +P++++Y V+I G
Sbjct: 223 LXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            C+ G ++E  ++ E M  + +  + + ++ L++  C  G   +AL L  EM   GL P+
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPN 342

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY+ LI  +CK   +++A++  ++M  + + PN   +  ++ G  ++  + +A     
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            ++ +     ++ YN +I+G+  LG + +A  L +++IE+   P +V+++++I GFC+N 
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           ++  A +L   +   G+ P   TY++ +   C++  +  +  L QEM +  + P  VTYT
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I   C +  L +A++L ++M   G +PD +TYN +I  F K    ++A +LL ++   
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582

Query: 513 NLEPTSATYNILID---------------GLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
              P   TYN LID               G C+ G +  AD +L S+ +    L +  Y 
Sbjct: 583 ESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYN 642

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGF---EISIRDYTKSFFC------------MMLSN 602
            II  H   G++ KA   + +M+  GF    ++I    KS +               L +
Sbjct: 643 VIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKS 702

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
               +  + +V++    + G++ +VF +   M  SGLLP
Sbjct: 703 CRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 158/553 (28%), Positives = 263/553 (47%), Gaps = 59/553 (10%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD----IMWDLYDDIKVSETPRN 62
           +R  +++ A+ ++   K       + +YN++L  +  T     I   ++ ++  S    N
Sbjct: 143 ARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPN 202

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT +I+I G C    L+  + F  E       P+VV+ N I+  YCKL     A  L  
Sbjct: 203 VYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLR 262

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           LM   GL+P+  SYN++I+GLC  G M+E  E   +M +    PD +T++ L  G+  + 
Sbjct: 263 LMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVG 322

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL------------------- 223
               A  +  +++  G  P++VTYT LI   C+ GN+   +                   
Sbjct: 323 NFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYT 382

Query: 224 ----------------KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
                           ++ + M+  GF   +I Y+ L++  C  GR+++A GLL EM   
Sbjct: 383 TLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIER 442

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  PD+V+YS +I G C+  ++ KA QL  EM +K ISP+   + +++ GLC++  + E 
Sbjct: 443 GFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEV 502

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F  ++      D V Y  +I+ Y   G++ +A++L+ ++I+K  SP IVT+N LI G
Sbjct: 503 CDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLING 562

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           F K  +  +A+RLL  +      P+ +TY T ++  C     +  LAL+           
Sbjct: 563 FNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN-CNNLEFKSALALM----------- 610

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
                   KG C +  + EA ++LE M   G   ++  YN II    K  ++ KA+ L  
Sbjct: 611 --------KGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYK 662

Query: 508 QMWLHNLEPTSAT 520
           +M      P S T
Sbjct: 663 EMLHSGFAPHSVT 675



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 211/418 (50%), Gaps = 16/418 (3%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK-QDKVHKAIQLYNEM 299
           + +++ S  +   I++AL ++   ++ G  P +++Y+ ++  + + +  V  A  ++ EM
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               +SPN + +  ++ G C    +     +F  +  + C+ +VV YN +ID Y KL  I
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           GEA +L R +  K ++P+++++N +I G C+ G++ +   +L+ +      P  VT+ T 
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N YC  GN  + L L  EM    + P  VTYT +I  +CK   L  A++ L+ M   G+
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+  TY T+I  F +   L++A+Q++ +M  +   PT  TYN LI+G C+ G +++A  
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASG 434

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------ 593
           LL  + E       V+Y+TII   C   ++ KA     +MV KG    +  Y+       
Sbjct: 435 LLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLC 494

Query: 594 ---------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                      F  MLS G PPD+     ++ A+   GDL     L   MI+ G  PD
Sbjct: 495 KQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 225/449 (50%), Gaps = 33/449 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y   G  H A+ + A+M +  L  ++ TY +L+ ++    + +   +  D ++      N
Sbjct: 318 YCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPN 377

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +IDG  QQ  L+ A   ++E     F P++++ NA+++ +C LG  E A GL  
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQ 437

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M++ G  PD  SY+ +I G C    +E+A +   +M   G+ PD  TYS L +G     
Sbjct: 438 EMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQR 497

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++     + Q++L  G  PD VTYT LI  YC  G++++ L+L + M+ +GF  +++ Y+
Sbjct: 498 RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYN 557

Query: 243 VLLSSMCKSGRIDEA----LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           VL++   K  R  EA    L LLYE E+V   P+ +TY+ LI   C   +   A+     
Sbjct: 558 VLINGFNKQSRTKEAKRLLLKLLYE-ESV---PNEITYNTLIDN-CNNLEFKSAL----- 607

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
                         A++ G C K ++ EA    +S++      +  +YN++I G+ K+GN
Sbjct: 608 --------------ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGN 653

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD-TIKLHGLEPSAVTYT 417
           I +A  LY++++    +P  VT  +L       GK  +  +LLD T+K   +  +A+   
Sbjct: 654 IEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALA-K 712

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             +    +EGN+  +  +L++M    + P
Sbjct: 713 VLIGINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 271/532 (50%), Gaps = 16/532 (3%)

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           +G+  D   YN L++ L     M+      ++MG  G++PD +T++ L K      Q+  
Sbjct: 48  FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 107

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  +++++  +G  PD  T+T L+ G+ + G++E  L+++  ML  G     +  +VL++
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             CK GR+++ALG + +  A G +PD +TY+  + GLC+ D V  A+++ + M  +   P
Sbjct: 168 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 227

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           + F +  ++  LC+   + EA+   + ++   C+ D+  +N +I        + EA+ L 
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 287

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           RQ+  K +SP + TFN LI   CK G    A RL + +K  G  P  VTY T ++  C  
Sbjct: 288 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 347

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G + + L LL++ME+     + +TY  +I GLCK+ +++EA ++ + M + G++ + IT+
Sbjct: 348 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 407

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           NT+I   CK K +  AF+L+NQM    L+P + TYN ++   C  GD+K A  +L ++  
Sbjct: 408 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 467

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------------- 593
           +   +  V Y T+I   C  G    A+     M  KG   + + Y               
Sbjct: 468 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 527

Query: 594 --SFFCMMLSNGFPPDQEICEVMLIAF-HQGGDLGSVFELAAVMIKSGLLPD 642
             S F  M   G PPD    +++       GG +   F+    M+  G +P+
Sbjct: 528 ALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 579



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 158/584 (27%), Positives = 287/584 (49%), Gaps = 39/584 (6%)

Query: 6   YSRTGMVHDAV-FVIAKMKEL-DLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETP 60
           Y    +  DAV  ++ +++ L  ++     YN LL  L       ++  +Y ++      
Sbjct: 27  YEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIK 86

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            +V T + ++  LC+  +++ A+L L+E + +   P   +   +M  + + G  E A  +
Sbjct: 87  PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 146

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              ML+ G      + N+LI+G C  G +E+AL +       G EPD ITY+    G   
Sbjct: 147 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 206

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A KV+  ++ +G DPD+ TY +++   C+ G +EE   +   M+ +G   ++  
Sbjct: 207 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 266

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++ L++++C   R++EAL L  ++   G+ PD+ T++ILI  LCK    H A++L+ EM 
Sbjct: 267 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 326

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +   +P+   +  ++  LC    + +A      +  + C +  + YN +IDG  K   I 
Sbjct: 327 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 386

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA +++ Q+  + IS + +TFN+LI G CK+ K+ DA  L++ +   GL+P+ +TY + +
Sbjct: 387 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 446

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             YC++G+I++   +L+ M         VTY  +I GLCK  + Q A+++L  M + G+ 
Sbjct: 447 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 506

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P    YN +++S  +  ++R A  L  +M      P + TY I+  GLC  G        
Sbjct: 507 PTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG-------- 558

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
                                     G + +A  F  +MV+KGF
Sbjct: 559 --------------------------GPIKEAFDFMLEMVDKGF 576



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 20/306 (6%)

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D V+YN +++  V+   +     +Y ++  + I P +VTFN+L+   C+  +V  A  +L
Sbjct: 53  DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 112

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           + +   G+ P   T+TT M  + EEG+I+  L +   M       T VT  V+I G CK 
Sbjct: 113 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 172

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++++A+  ++     G  PDQITYNT +   C+   +  A ++++ M     +P   TY
Sbjct: 173 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 232

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           NI+++ LC NG L+ A  +L  + +         + T+I A C    + +A+    Q+  
Sbjct: 233 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 292

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           KG                      PD     +++ A  + GD      L   M  SG  P
Sbjct: 293 KGVS--------------------PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 332

Query: 642 DKFLIN 647
           D+   N
Sbjct: 333 DEVTYN 338



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 15/257 (5%)

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           L G++   V Y   +N   E   ++ L ++  EM  + I P  VT+  ++K LC+  +++
Sbjct: 47  LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 106

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
            AV +LE+M   GV PD+ T+ T+++ F +   +  A ++  +M       T  T N+LI
Sbjct: 107 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 166

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           +G C  G +++A   +           ++ Y T +   C    V  A+     MV++G +
Sbjct: 167 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 226

Query: 586 ISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
             +  Y                K     M+  G  PD      ++ A   G  L    +L
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286

Query: 631 AAVMIKSGLLPDKFLIN 647
           A  +   G+ PD +  N
Sbjct: 287 ARQVTVKGVSPDVYTFN 303


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  285 bits (729), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 271/532 (50%), Gaps = 16/532 (3%)

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           +G+  D   YN L++ L     M+      ++MG  G++PD +T++ L K      Q+  
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  +++++  +G  PD  T+T L+ G+ + G++E  L+++  ML  G     +  +VL++
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             CK GR+++ALG + +  A G +PD +TY+  + GLC+ D V  A+++ + M  +   P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           + F +  ++  LC+   + EA+   + ++   C+ D+  +N +I        + EA+ L 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           RQ+  K +SP + TFN LI   CK G    A RL + +K  G  P  VTY T ++  C  
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G + + L LL++ME+     + +TY  +I GLCK+ +++EA ++ + M + G++ + IT+
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           NT+I   CK K +  AF+L+NQM    L+P + TYN ++   C  GD+K A  +L ++  
Sbjct: 500 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------------- 593
           +   +  V Y T+I   C  G    A+     M  KG   + + Y               
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 619

Query: 594 --SFFCMMLSNGFPPDQEICEVMLIAF-HQGGDLGSVFELAAVMIKSGLLPD 642
             S F  M   G PPD    +++       GG +   F+    M+  G +P+
Sbjct: 620 ALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 158/584 (27%), Positives = 287/584 (49%), Gaps = 39/584 (6%)

Query: 6   YSRTGMVHDAV-FVIAKMKEL-DLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETP 60
           Y    +  DAV  ++ +++ L  ++     YN LL  L       ++  +Y ++      
Sbjct: 119 YEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIK 178

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            +V T + ++  LC+  +++ A+L L+E + +   P   +   +M  + + G  E A  +
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              ML+ G      + N+LI+G C  G +E+AL +       G EPD ITY+    G   
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A KV+  ++ +G DPD+ TY +++   C+ G +EE   +   M+ +G   ++  
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++ L++++C   R++EAL L  ++   G+ PD+ T++ILI  LCK    H A++L+ EM 
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +   +P+   +  ++  LC    + +A      +  + C +  + YN +IDG  K   I 
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA +++ Q+  + IS + +TFN+LI G CK+ K+ DA  L++ +   GL+P+ +TY + +
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             YC++G+I++   +L+ M         VTY  +I GLCK  + Q A+++L  M + G+ 
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P    YN +++S  +  ++R A  L  +M      P + TY I+  GLC  G        
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG-------- 650

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
                                     G + +A  F  +MV+KGF
Sbjct: 651 --------------------------GPIKEAFDFMLEMVDKGF 668



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 20/306 (6%)

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D V+YN +++  V+   +     +Y ++  + I P +VTFN+L+   C+  +V  A  +L
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           + +   G+ P   T+TT M  + EEG+I+  L +   M       T VT  V+I G CK 
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++++A+  ++     G  PDQITYNT +   C+   +  A ++++ M     +P   TY
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 324

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           NI+++ LC NG L+ A  +L  + +         + T+I A C    + +A+    Q+  
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           KG                      PD     +++ A  + GD      L   M  SG  P
Sbjct: 385 KGVS--------------------PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424

Query: 642 DKFLIN 647
           D+   N
Sbjct: 425 DEVTYN 430



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 15/257 (5%)

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           L G++   V Y   +N   E   ++ L ++  EM  + I P  VT+  ++K LC+  +++
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
            AV +LE+M   GV PD+ T+ T+++ F +   +  A ++  +M       T  T N+LI
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           +G C  G +++A   +           ++ Y T +   C    V  A+     MV++G +
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318

Query: 586 ISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
             +  Y                K     M+  G  PD      ++ A   G  L    +L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 631 AAVMIKSGLLPDKFLIN 647
           A  +   G+ PD +  N
Sbjct: 379 ARQVTVKGVSPDVYTFN 395


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  285 bits (729), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 271/532 (50%), Gaps = 16/532 (3%)

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           +G+  D   YN L++ L     M+      ++MG  G++PD +T++ L K      Q+  
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  +++++  +G  PD  T+T L+ G+ + G++E  L+++  ML  G     +  +VL++
Sbjct: 200 AVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             CK GR+++ALG + +  A G +PD +TY+  + GLC+ D V  A+++ + M  +   P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           + F +  ++  LC+   + EA+   + ++   C+ D+  +N +I        + EA+ L 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           RQ+  K +SP + TFN LI   CK G    A RL + +K  G  P  VTY T ++  C  
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G + + L LL++ME+     + +TY  +I GLCK+ +++EA ++ + M + G++ + IT+
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           NT+I   CK K +  AF+L+NQM    L+P + TYN ++   C  GD+K A  +L ++  
Sbjct: 500 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------------- 593
           +   +  V Y T+I   C  G    A+     M  KG   + + Y               
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 619

Query: 594 --SFFCMMLSNGFPPDQEICEVMLIAF-HQGGDLGSVFELAAVMIKSGLLPD 642
             S F  M   G PPD    +++       GG +   F+    M+  G +P+
Sbjct: 620 ALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 157/584 (26%), Positives = 287/584 (49%), Gaps = 39/584 (6%)

Query: 6   YSRTGMVHDAV-FVIAKMKEL-DLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETP 60
           Y    +  DAV  ++ +++ L  ++     YN LL  L       ++  +Y ++      
Sbjct: 119 YEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIK 178

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            +V T + ++  LC+  +++ A++ L+E + +   P   +   +M  + + G  E A  +
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              ML+ G      + N+LI+G C  G +E+AL +       G EPD ITY+    G   
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A KV+  ++ +G DPD+ TY +++   C+ G +EE   +   M+ +G   ++  
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++ L++++C   R++EAL L  ++   G+ PD+ T++ILI  LCK    H A++L+ EM 
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +   +P+   +  ++  LC    + +A      +  + C +  + YN +IDG  K   I 
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA +++ Q+  + IS + +TFN+LI G CK+ K+ DA  L++ +   GL+P+ +TY + +
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             YC++G+I++   +L+ M         VTY  +I GLCK  + Q A+++L  M + G+ 
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P    YN +++S  +  ++R A  L  +M      P + TY I+  GLC  G        
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG-------- 650

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
                                     G + +A  F  +MV+KGF
Sbjct: 651 --------------------------GPIKEAFDFMLEMVDKGF 668



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 20/306 (6%)

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D V+YN +++  V+   +     +Y ++  + I P +VTFN+L+   C+  +V  A  +L
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIML 204

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           + +   G+ P   T+TT M  + EEG+I+  L +   M       T VT  V+I G CK 
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++++A+  ++     G  PDQITYNT +   C+   +  A ++++ M     +P   TY
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 324

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           NI+++ LC NG L+ A  +L  + +         + T+I A C    + +A+    Q+  
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           KG                      PD     +++ A  + GD      L   M  SG  P
Sbjct: 385 KGVS--------------------PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424

Query: 642 DKFLIN 647
           D+   N
Sbjct: 425 DEVTYN 430



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 15/257 (5%)

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           L G++   V Y   +N   E   ++ L ++  EM  + I P  VT+  ++K LC+  +++
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
            AV +LE+M   GV PD+ T+ T+++ F +   +  A ++  +M       T  T N+LI
Sbjct: 199 TAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           +G C  G +++A   +           ++ Y T +   C    V  A+     MV++G +
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318

Query: 586 ISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
             +  Y                K     M+  G  PD      ++ A   G  L    +L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 631 AAVMIKSGLLPDKFLIN 647
           A  +   G+ PD +  N
Sbjct: 379 ARQVTVKGVSPDVYTFN 395


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 161/579 (27%), Positives = 306/579 (52%), Gaps = 31/579 (5%)

Query: 94  FGPSVVSLNAIMSRYCKLGFA-EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           F P V+S NAI+    +   + ++A+G+F  M++ G+ P+ ++YNILI G C AG++E  
Sbjct: 163 FMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           L F  +M R+G  P+ +TY+ +   +  L +I  A+K+++ + +KG +P++++Y V+I G
Sbjct: 223 LFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            C+ G ++E  ++ E M  + +  + + ++ L++  C  G   +AL L  EM   GL P+
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPN 342

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY+ LI  +CK   +++A++  ++M  + + PN   +  ++ G  ++  + +A     
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            ++ +     ++ YN +I+G+  LG + +A  L +++IE+   P +V+++++I GFC+N 
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           ++  A +L   +   G+ P   TY++ +   C++  +  +  L QEM +  + P  VTYT
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I   C +  L +A++L ++M   G +PD +TYN +I  F K    ++A +LL ++   
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582

Query: 513 NLEPTSATYNILID---------------GLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
              P   TYN LID               G C+ G +  AD +L S+ +    L +  Y 
Sbjct: 583 ESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYN 642

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGF---EISIRDYTKSFFC------------MMLSN 602
            II  H   G++ KA   + +M+  GF    ++I    KS +               L +
Sbjct: 643 VIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKS 702

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
               +  + +V++    + G++ +VF +   M  SGLLP
Sbjct: 703 CRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 158/553 (28%), Positives = 263/553 (47%), Gaps = 59/553 (10%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD----IMWDLYDDIKVSETPRN 62
           +R  +++ A+ ++   K       + +YN++L  +  T     I   ++ ++  S    N
Sbjct: 143 ARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPN 202

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT +I+I G C    L+  + F  E       P+VV+ N I+  YCKL     A  L  
Sbjct: 203 VYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLR 262

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           LM   GL+P+  SYN++I+GLC  G M+E  E   +M +    PD +T++ L  G+  + 
Sbjct: 263 LMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVG 322

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL------------------- 223
               A  +  +++  G  P++VTYT LI   C+ GN+   +                   
Sbjct: 323 NFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYT 382

Query: 224 ----------------KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
                           ++ + M+  GF   +I Y+ L++  C  GR+++A GLL EM   
Sbjct: 383 TLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIER 442

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  PD+V+YS +I G C+  ++ KA QL  EM +K ISP+   + +++ GLC++  + E 
Sbjct: 443 GFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEV 502

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F  ++      D V Y  +I+ Y   G++ +A++L+ ++I+K  SP IVT+N LI G
Sbjct: 503 CDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLING 562

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           F K  +  +A+RLL  +      P+ +TY T ++  C     +  LAL+           
Sbjct: 563 FNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN-CNNLEFKSALALM----------- 610

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
                   KG C +  + EA ++LE M   G   ++  YN II    K  ++ KA+ L  
Sbjct: 611 --------KGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYK 662

Query: 508 QMWLHNLEPTSAT 520
           +M      P S T
Sbjct: 663 EMLHSGFAPHSVT 675



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 211/418 (50%), Gaps = 16/418 (3%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK-QDKVHKAIQLYNEM 299
           + +++ S  +   I++AL ++   ++ G  P +++Y+ ++  + + +  V  A  ++ EM
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               +SPN + +  ++ G C    +     +F  +  + C+ +VV YN +ID Y KL  I
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           GEA +L R +  K ++P+++++N +I G C+ G++ +   +L+ +      P  VT+ T 
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N YC  GN  + L L  EM    + P  VTYT +I  +CK   L  A++ L+ M   G+
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+  TY T+I  F +   L++A+Q++ +M  +   PT  TYN LI+G C+ G +++A  
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASG 434

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------ 593
           LL  + E       V+Y+TII   C   ++ KA     +MV KG    +  Y+       
Sbjct: 435 LLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLC 494

Query: 594 ---------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                      F  MLS G PPD+     ++ A+   GDL     L   MI+ G  PD
Sbjct: 495 KQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 225/449 (50%), Gaps = 33/449 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y   G  H A+ + A+M +  L  ++ TY +L+ ++    + +   +  D ++      N
Sbjct: 318 YCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPN 377

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +IDG  QQ  L+ A   ++E     F P++++ NA+++ +C LG  E A GL  
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQ 437

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M++ G  PD  SY+ +I G C    +E+A +   +M   G+ PD  TYS L +G     
Sbjct: 438 EMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQR 497

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++     + Q++L  G  PD VTYT LI  YC  G++++ L+L + M+ +GF  +++ Y+
Sbjct: 498 RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYN 557

Query: 243 VLLSSMCKSGRIDEA----LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           VL++   K  R  EA    L LLYE E+V   P+ +TY+ LI   C   +   A+     
Sbjct: 558 VLINGFNKQSRTKEAKRLLLKLLYE-ESV---PNEITYNTLIDN-CNNLEFKSAL----- 607

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
                         A++ G C K ++ EA    +S++      +  +YN++I G+ K+GN
Sbjct: 608 --------------ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGN 653

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD-TIKLHGLEPSAVTYT 417
           I +A  LY++++    +P  VT  +L       GK  +  +LLD T+K   +  +A+   
Sbjct: 654 IEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALA-K 712

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             +    +EGN+  +  +L++M    + P
Sbjct: 713 VLIGINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 181/557 (32%), Positives = 284/557 (50%), Gaps = 16/557 (2%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---------YNLRHTDIMWDLYDDIK 55
            Y   G  H A  +  +MK L ++ ++ T N+LL         +++R +  ++  +  I 
Sbjct: 133 AYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIG 192

Query: 56  VSETPRNVYTNS--IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           V      + TNS  I+I G C ++R  +AI  L +       P  ++ N I+   CK G 
Sbjct: 193 VK-----INTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGR 247

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A+ L   M   GL P+  ++NIL+ G C  G ++EA      M ++ V PDA TY++
Sbjct: 248 LNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNV 307

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +  GF    +I+ A ++ +++      PD+VTY  LI G  + G+ EEG KL E M  +G
Sbjct: 308 MISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRG 367

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            K N + Y+V++    K G++DE    + +ME  G  PD+VTY+ LI   CK  K+ +A 
Sbjct: 368 MKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAF 427

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           +L +EM  K +  +      +L  LC +  + EA     S        D V Y  +I GY
Sbjct: 428 RLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGY 487

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K     +A++L+ ++ EK I PSI+T+NS+I G C+ GK   A   LD +   GL P  
Sbjct: 488 FKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDE 547

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           +TY T ++ YC+EG +++      +M  K   P  VT   ++ GLCK+  L++A++L   
Sbjct: 548 ITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNT 607

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
               G   D ++YNTII S CK K   +AF LL +M    L P   TYN ++ GL   G 
Sbjct: 608 WISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGR 667

Query: 534 LKNADCLLVSLQEHNIS 550
           +K+A+  +  + E   S
Sbjct: 668 MKDAEEFISKIAEKGKS 684



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 253/512 (49%), Gaps = 48/512 (9%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N+  N+I +DGLC++ RL +A   L +   K   P+  + N ++   C+LG+ + A  
Sbjct: 230 PDNITYNTI-LDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAAN 288

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL----- 174
           +  LM +  + PDA++YN++I G C  G + EA+    +M    + PD +TY+ L     
Sbjct: 289 VIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCF 348

Query: 175 -----AKGFHLLSQISG--------------AW-----------KVIQKLLIKGSDPDIV 204
                 +GF L+ ++ G               W           K ++K+   G  PDIV
Sbjct: 349 EHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIV 408

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TY  LI  +C++G ++E  +L + M  +G K++ +  + +L ++C+  ++DEA  LL   
Sbjct: 409 TYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSA 468

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              G   D V+Y  LI G  K +K  +A++L++EM  K I P+   + +++ GLC+    
Sbjct: 469 RRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKT 528

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            +A    D L+ S  + D + YN +I GY + G + +A Q + +++EK   P +VT N+L
Sbjct: 529 NQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTL 588

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           + G CK G +  A +L +T    G +  AV+Y T + + C+E        LL+EME K +
Sbjct: 589 LCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKL 648

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
           GP   TY  ++ GL    ++++A + +  +   G + +Q           K +D R +  
Sbjct: 649 GPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFL------ELGKRQDARTS-- 700

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
                      P +  Y+  I+ LC  G  K+
Sbjct: 701 ----EIPQEPHPNAIAYSNKINELCSQGRYKD 728



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 242/526 (46%), Gaps = 38/526 (7%)

Query: 96  PSVVSLNAIMS---RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           P++++ N +++   R+       ++K +F   +K G+  +  S+NILIHG C+     EA
Sbjct: 157 PTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEA 216

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           +     M  +G  PD ITY+ +  G     +++ A  ++  +  KG  P+  T+ +L+ G
Sbjct: 217 IRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVG 276

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            C++G ++E   + E+M       +   Y+V++S  CK GRI EA+ L  EME + L PD
Sbjct: 277 CCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPD 336

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY+ LI G  +     +  +L  EM  + + PNS  +  ++    +K  + E      
Sbjct: 337 VVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVR 396

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS--------- 383
            +  S C+ D+V YN +I  + K+G + EA +L  ++  K +    VT N+         
Sbjct: 397 KMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRER 456

Query: 384 --------------------------LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
                                     LI G+ K+ K + A RL D +K   + PS +TY 
Sbjct: 457 KLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYN 516

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           + +   C+ G   + +  L E+    + P  +TY  +I G C++ ++++A Q    M   
Sbjct: 517 SMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEK 576

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
              PD +T NT++   CK   L KA +L N       +  + +YN +I  LC       A
Sbjct: 577 NFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEA 636

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             LL  ++E  +      Y  I+      G +  A  F  ++ EKG
Sbjct: 637 FDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 246/537 (45%), Gaps = 18/537 (3%)

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG---FHLLSQIS 185
           LH      +I I      G   +A +  N M R G++P  +T + L      F     I 
Sbjct: 120 LHISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIR 179

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            +  V    +  G   +  ++ +LI G C      E +++   M   G   + I Y+ +L
Sbjct: 180 LSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTIL 239

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +CK GR++EA  LL +M+  GL P+  T++IL+ G C+   + +A  +   M    + 
Sbjct: 240 DGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVV 299

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+++ +  ++ G C++  I EA    + +       DVV YN +I+G  + G+  E  +L
Sbjct: 300 PDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKL 359

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++  + + P+ VT+N ++  F K GK+ +  + +  ++  G  P  VTY T ++ +C+
Sbjct: 360 IEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCK 419

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G +     L+ EM  K +    VT   +++ LC++ KL EA  LL      G   D+++
Sbjct: 420 VGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVS 479

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           Y T+I  + K +   +A +L ++M    + P+  TYN +I GLC  G    A   L  L 
Sbjct: 480 YGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELL 539

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI---------------RD 590
           E  +   ++ Y TII  +C EG V KA  F  +MVEK F+  +                +
Sbjct: 540 ESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLE 599

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                F   +S G   D      ++++  +    G  F+L   M +  L PD +  N
Sbjct: 600 KALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYN 656



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 211/447 (47%), Gaps = 28/447 (6%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
           R G + +A  VI  M +  +     TYN ++       R  + M  L ++++  +   +V
Sbjct: 279 RLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAM-RLREEMENLKLSPDV 337

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +I+G  +    ++    ++E  G+   P+ V+ N ++  + K G  +        
Sbjct: 338 VTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRK 397

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M + G  PD  +YN LI   C  G M+EA    ++MGR G++ D +T + + +      +
Sbjct: 398 MEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERK 457

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A  ++     +G   D V+Y  LI GY +     + L+L + M  +    ++I Y+ 
Sbjct: 458 LDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNS 517

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +++ +C+ G+ ++A+  L E+   GL PD +TY+ +I G C++ +V KA Q +N+M  K 
Sbjct: 518 MIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKN 577

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+      +L GLC++ M+ +A   F++ I      D V YN +I    K    GEA 
Sbjct: 578 FKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAF 637

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG------LE------- 410
            L  ++ EK++ P   T+N+++ G    G++ DA   +  I   G      LE       
Sbjct: 638 DLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDA 697

Query: 411 ----------PSAVTYTTFMNAYCEEG 427
                     P+A+ Y+  +N  C +G
Sbjct: 698 RTSEIPQEPHPNAIAYSNKINELCSQG 724



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 153/307 (49%), Gaps = 3/307 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           + + G + +    + KM+E      I TYN+L+     +   D  + L D++       +
Sbjct: 382 FVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMD 441

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + ++  LC++ +L +A   L     + +    VS   ++  Y K   A  A  L+ 
Sbjct: 442 DVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWD 501

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M +  + P   +YN +I GLC  G   +A++  +++   G+ PD ITY+ +  G+    
Sbjct: 502 EMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEG 561

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           Q+  A++   K++ K   PD+VT   L+CG C+ G +E+ LKL    +S+G  ++ ++Y+
Sbjct: 562 QVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYN 621

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++ S+CK  R  EA  LL EME   L PD  TY+ ++ GL    ++  A +  +++  K
Sbjct: 622 TIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEK 681

Query: 303 RISPNSF 309
             S N F
Sbjct: 682 GKSENQF 688



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 15/251 (5%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y +      A+ +  +MKE ++  SI TYNS++  L     T+   D  D++  S    +
Sbjct: 487 YFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPD 546

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +I G CQ+ +++ A  F  +   K F P VV+ N ++   CK G  E A  LF 
Sbjct: 547 EITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFN 606

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             +  G   DA SYN +I  LC      EA +   +M    + PD  TY+ +  G     
Sbjct: 607 TWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAG 666

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A + I K+  KG   +          + ++G  ++    R   + Q    N IAYS
Sbjct: 667 RMKDAEEFISKIAEKGKSEN---------QFLELGKRQDA---RTSEIPQEPHPNAIAYS 714

Query: 243 VLLSSMCKSGR 253
             ++ +C  GR
Sbjct: 715 NKINELCSQGR 725


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 157/474 (33%), Positives = 262/474 (55%), Gaps = 6/474 (1%)

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           C  G    A  L   M   G  PDAF++  +I  +  AG ++ A++    MG    +P+ 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG---CDPNV 57

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +TY+ L   F    ++  A K+++++  +G  P++VTY VL+   C++  V     + + 
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M+  GF  NV+ ++ L+   CK G +D+A  LL  M A G++P++VTYS LI GLCK  K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
             +A ++  EM +  ++P++F + A++ GLC+ + I EA      +  S C  DVV+Y+ 
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I  + K G + EA +  +++ ++R SP +VT+N++I G CK GK+A+A+ +LD ++  G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 409 -LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
            + P  VTY+T +N  C+   +     LL  M      P  VTYT +I GLCK  +L+EA
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
             LL+ M   G  P+ +TY T+I   CK + + +A +++ +M      P   TYN +++G
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVA--YTTIIKAHCAEGDVHKAMTFFCQM 579
           LCV+G +K A  L+  +++     +  A  Y TI+ A  +   V +A     QM
Sbjct: 418 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/445 (31%), Positives = 227/445 (51%), Gaps = 4/445 (0%)

Query: 144 CIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
           C AG +  ALE   +M   G  PDA T++ +         + GA   ++ +   G DP++
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           VTYT LI  + +   +EE +KL E M  +G   N++ Y+VL+ ++CK   +  A  ++ +
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M   G  P+++T++ L+ G CK+  V  A +L   M +K + PN   + A++ GLC+ + 
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
             EA+   + +  S    D   Y+ +I G  K   I EA Q+ R++     +P +V ++S
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM-ETK 442
           +I+ FCK+GK+ +A++ L  ++     P  VTY T ++  C+ G I     +L +M E+ 
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P  VTY+ VI GLCK   L EA +LL+ M   G  PD +TY TII   CKC  L +A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
             LL  M      P   TY  LI GLC    +  A+ ++  ++        V Y T++  
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEIS 587
            C  G + +A     +M +   E S
Sbjct: 418 LCVSGRIKEAQQLVQRMKDGRAECS 442



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 241/469 (51%), Gaps = 3/469 (0%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
            G +H A+ ++ +MK         T+  ++  + +   +    D ++      NV T + 
Sbjct: 3   AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTA 62

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I    +  +L++A+  L+E   +   P++V+ N ++   CKL     A+ +   M++ G
Sbjct: 63  LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P+  ++N L+ G C  G++++A +    M   G+ P+ +TYS L  G     +   A 
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +V++++   G  PD  TY+ LI G C+   +EE  ++   M   G   +V+ YS ++ + 
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 242

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC-SKRISPN 307
           CKSG++ EA   L EM      PD+VTY+ +I GLCK  K+ +A  + ++M  S  + P+
Sbjct: 243 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPD 302

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  ++ GLC+ +M+ EA+   D +  + C  DVV Y  +IDG  K G + EA  L +
Sbjct: 303 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 362

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            +     +P++VT+ +LI G CK  KV +A R+++ ++  G  P+ VTY T +N  C  G
Sbjct: 363 GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSG 422

Query: 428 NIQRLLALLQEME--TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            I+    L+Q M+       P   TY  ++  L     +QEA QLLE M
Sbjct: 423 RIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 220/432 (50%), Gaps = 4/432 (0%)

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A ++++++   G  PD  T+T +I      G+++  +   + + S G   NV+ Y+ 
Sbjct: 6   LHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVTYTA 62

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+++  ++ +++EA+ LL EM   G  P+LVTY++L+  LCK   V  A  +  +M    
Sbjct: 63  LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +PN     +++ G C++  + +AR     ++      +VV Y+ +IDG  K     EA 
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           ++  ++    ++P   T+++LI+G CK  K+ +A ++L  +   G  P  V Y++ ++A+
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 242

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-VTPD 482
           C+ G +      LQEM  +   P  VTY  VI GLCK  K+ EA  +L+ M   G V PD
Sbjct: 243 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPD 302

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TY+T+I   CK   L +A +LL++M      P   TY  +IDGLC  G L+ A+ LL 
Sbjct: 303 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 362

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
            ++    +   V YTT+I   C    V +A     +M   G   ++  Y      + +S 
Sbjct: 363 GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSG 422

Query: 603 GFPPDQEICEVM 614
                Q++ + M
Sbjct: 423 RIKEAQQLVQRM 434



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 223/441 (50%), Gaps = 35/441 (7%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
           L   ++R   + +A+ ++ +M+E     ++ TYN L                        
Sbjct: 63  LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVL------------------------ 98

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
                   +D LC+ S +  A   +++     F P+V++ N+++  +CK G  + A+ L 
Sbjct: 99  --------VDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLL 150

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M+  G+ P+  +Y+ LI GLC +    EA E   +M   GV PDA TYS L  G    
Sbjct: 151 GIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKA 210

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A ++++++   G  PD+V Y+ +I  +C+ G + E  K  + M  Q    +V+ Y
Sbjct: 211 DKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTY 270

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVG-LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           + ++  +CK G+I EA  +L +M+  G + PD+VTYS +I GLCK D + +A +L + MC
Sbjct: 271 NTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMC 330

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
               +P+   +  I+ GLC+   + EA      +  + C  +VV Y  +I G  K   + 
Sbjct: 331 KAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVD 390

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE--PSAVTYTT 418
           EA ++  ++      P++VT+N+++ G C +G++ +A++L+  +K    E  P A TY T
Sbjct: 391 EAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRT 450

Query: 419 FMNAYCEEGNIQRLLALLQEM 439
            +NA      +Q    LL++M
Sbjct: 451 IVNALMSSDLVQEAEQLLEQM 471



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 70/184 (38%), Gaps = 23/184 (12%)

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           C    L  A++LLE+M   G  PD  T+  II +     DL  A   L  M     +P  
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGC---DPNV 57

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TY  LI        L+ A  LL  ++E       V Y  ++ A C    V  A     +
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
           M+E GF  ++  +                      ++  F + G++    +L  +M+  G
Sbjct: 118 MIEGGFAPNVMTFNS--------------------LVDGFCKRGNVDDARKLLGIMVAKG 157

Query: 639 LLPD 642
           + P+
Sbjct: 158 MRPN 161


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 188/668 (28%), Positives = 320/668 (47%), Gaps = 29/668 (4%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +L  VY + GM+  AV     +  +  K S+ T N +L ++   + T+++W L+ ++   
Sbjct: 168 LLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK 227

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NV T +I+I+GLC +  L+ A   L++     F P++V+ N +++ YCK G  + A
Sbjct: 228 GICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 287

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M+  G+  D  +YN+ I  LC      +A      M +  + P+ +TY+ L  G
Sbjct: 288 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 347

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    +I  A +V  ++      P+ VTY  LI G+C +G+ EE L+L + M + G +LN
Sbjct: 348 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 407

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + Y  LL+ +CK  + + A  LL  M    +    + Y++LI GLCK   + +A+QL  
Sbjct: 408 EVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVG 467

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEA-----RMYFDSLIMSNCIQDVVLYNIMIDG 352
            M    ++P+   + +++ G C    I  A     RMY   L+++  I   ++YN     
Sbjct: 468 NMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYN----- 522

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           + + GN+ EA+++Y  +          T N L+   C++GK+ +A + L  +   GL P+
Sbjct: 523 FCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPN 582

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
           ++TY   +N Y   G+     +   +M      P+  TY  ++KGLCK   L EA + L 
Sbjct: 583 SITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLN 642

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            ++ I    D + YNT++   CK  +L +A  L ++M  +N+ P S TY+ L+ GLC  G
Sbjct: 643 RLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKG 702

Query: 533 DLKNADCLL-VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------F 584
               A CL   ++    +    V YT ++      G    A  FF +M++KG       F
Sbjct: 703 KAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAF 762

Query: 585 EISIRDYTK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
              I   ++         FF  M   G  P+     ++L  F +   L     L + M++
Sbjct: 763 NAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMR 822

Query: 637 SGLLPDKF 644
            G+ PDK 
Sbjct: 823 EGIFPDKL 830



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 157/654 (24%), Positives = 288/654 (44%), Gaps = 21/654 (3%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLL----YNLRHTDIMWDLYDDIKVSETPRNVYT 65
           G +  A  ++ +M+E     +I TYN+LL       R+   + +L D +       +V T
Sbjct: 247 GNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI-ELIDYMICKGIEADVCT 305

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            ++ ID LC   R   A L L++   +   P+ V+ N +++ + K G   VA  +F  M 
Sbjct: 306 YNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMS 365

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K+ L P+  +YN LI G C  G  EEAL   + M   G+  + +TY  L  G     +  
Sbjct: 366 KFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFE 425

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A ++++++ +       + YTVLI G C+ G ++E ++L   M   G   +VI YS L+
Sbjct: 426 LAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLI 485

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           +  C+ G I  A  ++  M   GL  + + YS LI   C+   V +A+++Y  M      
Sbjct: 486 NGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHG 545

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
            + F    ++  LC    + EA  +   +     + + + Y+ +I+GY  +G+   A   
Sbjct: 546 ADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSF 605

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           +  +I+    PS  T+ SL+ G CK G + +A++ L+ +        +V Y T +   C+
Sbjct: 606 FDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCK 665

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT-PDQI 484
            GN+   +AL  +M    + P   TY+ ++ GLC++ K   AV L       G   P+ +
Sbjct: 666 SGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHV 725

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y  ++    K    + AF    +M      P +  +N +ID     G +  A+    ++
Sbjct: 726 MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 785

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF---------------EISIR 589
           +   +      Y  ++     +  + + ++ +  M+ +G                +  I 
Sbjct: 786 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 845

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           D        M+  G   DQ    +++  + + G +   F+L   M   G+ PD+
Sbjct: 846 DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDR 899



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 235/487 (48%), Gaps = 39/487 (8%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLF-CLMLKYGLHPDAFS-YNILIHGLCIAGSMEEALEFTN 157
           S  +I+   C++G    +K +F  LM  Y L     S +++LI      G ++ A+E   
Sbjct: 130 SAKSILRHLCQMGIG--SKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFE 187

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            +G  G +P   T +++        +    W + +++  KG  P++ T+ +LI G C  G
Sbjct: 188 LVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEG 247

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
           N+++   L + M   GF   ++ Y+ LL+  CK GR   A+ L+  M   G++ D+ TY+
Sbjct: 248 NLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYN 307

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           + I  LC   +  KA  L  +M  + ISPN                              
Sbjct: 308 VFIDNLCTNHRSAKAYLLLKKMRKEMISPNE----------------------------- 338

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
                 V YN +I+G+VK G IG A Q++ ++ +  +SP+ VT+N+LI G C  G   +A
Sbjct: 339 ------VTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEA 392

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
            RLLD ++  GL  + VTY T +N  C+    +    LL+ M    +   H+ YTV+I G
Sbjct: 393 LRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDG 452

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LCK   L EAVQL+ +MY  GV PD ITY+++I  FC+  +++ A +++ +M+   L   
Sbjct: 453 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 512

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
              Y+ LI   C +G++  A  +   +  +           ++ + C +G + +A  F C
Sbjct: 513 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 572

Query: 578 QMVEKGF 584
            M   G 
Sbjct: 573 HMSRIGL 579



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 163/693 (23%), Positives = 309/693 (44%), Gaps = 58/693 (8%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHT--DIMWDLYDDIKVSETPRN 62
            +   G   +A+ ++  M+   L+++  TY +LL  L +H   ++   L + ++V++    
Sbjct: 383  HCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVG 442

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
                +++IDGLC+   L +A+  +         P V++ +++++ +C++G  + AK + C
Sbjct: 443  HIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIIC 502

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             M + GL  +   Y+ LI+  C  G++ EA++    M  +G   D  T ++L        
Sbjct: 503  RMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDG 562

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            ++  A K +  +   G  P+ +TY  +I GY  IG+        + M+  G   +   Y 
Sbjct: 563  KLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYG 622

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             LL  +CK G + EA   L  +  +    D V Y+ L+   CK   +H+A+ L+++M   
Sbjct: 623  SLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQN 682

Query: 303  RISPNSFAHGAILLGLCEK-EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             + P+S+ + ++L GLC K + +T   ++  ++       + V+Y  ++DG  K G+   
Sbjct: 683  NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKA 742

Query: 362  AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            A   + ++++K   P  V FN++I    + G++  A     T++  G+ P+  TY   ++
Sbjct: 743  AFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLH 802

Query: 422  AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW------------------- 462
             + ++  + R L+L   M  + I P  +T+  +I GL K                     
Sbjct: 803  GFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLA 862

Query: 463  ----------------KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
                            K+++A  L+  M  +GV PD+ TYN I     K    R++  +L
Sbjct: 863  DQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVL 922

Query: 507  NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA--HC 564
            ++M  + + P  A Y  LI+G+C  GD++ A  L   ++       +VA + +++   HC
Sbjct: 923  HEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHC 982

Query: 565  AEGDVHKAMTFFCQMVEKGFEISIRDYTKSF--FC-------------MMLSNGFPPDQE 609
              G    AM     M+      +I  +T     FC             +M   G   D  
Sbjct: 983  --GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVV 1040

Query: 610  ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
               V+++     GD  + FEL   M    L P+
Sbjct: 1041 AYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 1073



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 161/696 (23%), Positives = 304/696 (43%), Gaps = 64/696 (9%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIM--WDLYDDIKVSETPRN 62
            + R G +  A  +I +M    L ++   Y++L+YN  +H ++     +Y  +  +    +
Sbjct: 488  FCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGAD 547

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +T ++++  LC+  +L +A  FL   +     P+ ++ + I++ Y  +G    A   F 
Sbjct: 548  HFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFD 607

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN------------------------- 157
             M+K G HP  F+Y  L+ GLC  G++ EA +F N                         
Sbjct: 608  DMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSG 667

Query: 158  ----------DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTY 206
                       M ++ V PD+ TYS L  G     +   A  +    + +G+  P+ V Y
Sbjct: 668  NLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMY 727

Query: 207  TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            T L+ G  + G+ +      E M+ +G   + +A++ ++ S  + G++ +A      M  
Sbjct: 728  TCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRW 787

Query: 267  VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
             G+ P+L TY+IL+ G  K+  + + + LY+ M  + I P+     +++LGL +  +   
Sbjct: 788  WGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDL 847

Query: 327  ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
                   +IM   + D   +NI+I+ Y + G + +A  L   +    + P   T+N +  
Sbjct: 848  GVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFN 907

Query: 387  GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
            G  K     ++  +L  +  +G+ P    Y T +N  C  G+IQ    L  EME    G 
Sbjct: 908  GLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGS 967

Query: 447  THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              V  + +++GL    K ++A+ +L+ M  + + P   T+ T++  FC+   + +A +L 
Sbjct: 968  HEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLK 1027

Query: 507  NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
              M L  L+     YN+LI G+C NGD   A  L   ++  ++      Y  ++ A  A 
Sbjct: 1028 GVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAA 1087

Query: 567  GDVHKAMTFFCQMVEKGF------------EISIR----DYTKSFFCMMLSNGFPPDQEI 610
             ++ +       + E+G             E+++     +Y + F+              
Sbjct: 1088 NNLIQGEKLLTDLQERGLISWGGSTQHLDKELTVAMGKLNYIRCFYPTTTEWTITTVTPW 1147

Query: 611  CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
            C +ML  F  G        + A+ +K GL  +K L+
Sbjct: 1148 CSIMLF-FVNG--------VGALRMKGGLFENKLLV 1174



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 210/437 (48%), Gaps = 20/437 (4%)

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           + +LI  Y + G ++  ++  E++   GFK +V   +++L+SM K  R +    L  EM 
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G+ P++ T++ILI GLC +  + KA  L  +M      P    +  +L   C+K    
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
            A    D +I      DV  YN+ ID         +A  L +++ ++ ISP+ VT+N+LI
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 345

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            GF K GK+  A ++ + +    L P+ VTY   +  +C  G+ +  L LL  ME   + 
Sbjct: 346 NGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLR 405

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
              VTY  ++ GLCK  K + A +LLE M V  +    I Y  +I   CK   L +A QL
Sbjct: 406 LNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQL 465

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           +  M+   + P   TY+ LI+G C  G++K+A  ++  +    + L K+ Y+T+I   C 
Sbjct: 466 VGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQ 525

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
            G+V +AM                      + +M  NG   D   C V++ +  + G LG
Sbjct: 526 HGNVTEAM--------------------KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 565

Query: 626 SVFELAAVMIKSGLLPD 642
              +    M + GL+P+
Sbjct: 566 EAEKFLCHMSRIGLVPN 582


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 158/499 (31%), Positives = 259/499 (51%), Gaps = 3/499 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGL--FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           PS+ + NA++S   +         L  F  ++   LHP+ +++N+L+H  C  G++ +AL
Sbjct: 170 PSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 229

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
              + M   G+ PDA+TY+ L         +  A  ++ ++  +G  P   TY  L+  Y
Sbjct: 230 STLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAY 289

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL-KPD 272
            ++G +++   + E M + GF+ ++  Y+VL + +C++G++DEA  L  EME +G+  PD
Sbjct: 290 ARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPD 349

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY+ L+    K  +   A+ L  EM  K +  +   H  I+ GLC +  + EA    +
Sbjct: 350 VVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLE 409

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +       DV+ YN +ID   K GN+ +A  L  +++   +     T N+L+Y  CK  
Sbjct: 410 MMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEK 469

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           +  +A  LL      G  P  V+Y T M AY +E   +  L L  EM  + + P+  TY 
Sbjct: 470 RYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYN 529

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +IKGL    KL EA+  L ++  +G+ PD  TYN II ++CK  DL KAFQ  N+M  +
Sbjct: 530 TLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVEN 589

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
           + +P   T N L++GLC+ G L+ A  L  S  E    +  + Y T+I+A C + DV  A
Sbjct: 590 SFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTA 649

Query: 573 MTFFCQMVEKGFEISIRDY 591
           + FF  M  +G +  +  Y
Sbjct: 650 LRFFADMEVRGLQPDVFTY 668



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 161/564 (28%), Positives = 279/564 (49%), Gaps = 11/564 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELD-LKVSIQTYNSLLYNLRHT-----DIMWDLYDDIKVSE 58
            Y+R  + H A  ++   +    ++ S+Q  N++L  L  +         D +  +    
Sbjct: 145 TYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALR 204

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              N YT ++++   C +  L DA+  L +  G    P  V+ N +++ +C+ G    A+
Sbjct: 205 LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 264

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M K G+ P   +YN L+      G +++A +    M   G EPD  TY++LA G 
Sbjct: 265 TLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGL 324

Query: 179 HLLSQISGAWKVIQKLLIKG-SDPDIVTYTVLI--CGYCQIGNVEEGLKLREVMLSQGFK 235
               ++  A+K+  ++   G   PD+VTY  L+  C  CQ  +  + L L E M  +G K
Sbjct: 325 CQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSS--DALNLLEEMREKGVK 382

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +++ +++++  +C+ G+++EALG L  M   GL PD++TY+ LI   CK   V KA  L
Sbjct: 383 SSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVL 442

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
            +EM    +  ++F    +L  LC+++   EA     +      + D V Y  ++  Y K
Sbjct: 443 MDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFK 502

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
                 A+ L+ ++I+++++PSI T+N+LI G    GK+ +A   L+ +   GL P   T
Sbjct: 503 EYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTT 562

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y   ++AYC+EG++++      +M   +  P  VT   ++ GLC   +L++A++L E   
Sbjct: 563 YNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWV 622

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G   D ITYNT+I++ CK  D+  A +    M +  L+P   TYN+L+  L   G   
Sbjct: 623 EKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSV 682

Query: 536 NADCLLVSLQEHNISLTKVAYTTI 559
            A  +L  L E      +  Y +I
Sbjct: 683 EAQKMLHKLNESGKLYGRFFYPSI 706



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/598 (24%), Positives = 270/598 (45%), Gaps = 69/598 (11%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           +L   +   G + DA+  ++KM+   L     TYN+LL                      
Sbjct: 214 LLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLL---------------------- 251

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
                     +  C++  L +A   L     +   P+  + N ++S Y +LG+ + A  +
Sbjct: 252 ----------NAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDV 301

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG-VEPDAITYSILAKGFH 179
              M  +G  PD ++YN+L  GLC AG ++EA +  ++M + G V PD +TY+ L     
Sbjct: 302 VEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACF 361

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              + S A  +++++  KG    +VT+ +++ G C+ G +EE L   E+M  +G   +VI
Sbjct: 362 KCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVI 421

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L+ + CK+G + +A  L+ EM   GLK D  T + L+  LCK+ +  +A +L    
Sbjct: 422 TYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAP 481

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             +   P+  ++G ++    ++     A   +D +I       +  YN +I G   +G +
Sbjct: 482 PQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKL 541

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA+    +L+E  + P   T+N +I+ +CK G +  A +  + +  +  +P  VT  T 
Sbjct: 542 TEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTL 601

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           MN  C  G +++ + L +    K      +TY  +I+ LCK   +  A++   DM V G+
Sbjct: 602 MNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGL 661

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQM------WLHNLEPT---------------- 517
            PD  TYN ++ +  +     +A ++L+++      +     P+                
Sbjct: 662 QPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEV 721

Query: 518 --------------SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
                           +YN  I  LC+ G LK A  +L  + +  +S+    Y T+++
Sbjct: 722 KSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLME 779



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 201/439 (45%), Gaps = 21/439 (4%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P+  T+ +L+  +C  G + + L     M   G   + + Y+ LL++ C+ G + EA  L
Sbjct: 207 PNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTL 266

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L  M+  G+ P   TY+ L+    +   + +A  +   M +    P+ + +  +  GLC+
Sbjct: 267 LARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQ 326

Query: 321 KEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
              + EA    D +     +  DVV YN ++D   K     +A+ L  ++ EK +  S+V
Sbjct: 327 AGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLV 386

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T N ++ G C+ G++ +A   L+ +   GL P  +TY T ++A C+ GN+ +   L+ EM
Sbjct: 387 THNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEM 446

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
               +     T   ++  LCK+ + +EA +LL      G  PD+++Y T++ ++ K    
Sbjct: 447 VRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKP 506

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
             A  L ++M    L P+ +TYN LI GL   G L  A   L  L E  +      Y  I
Sbjct: 507 EPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNII 566

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
           I A+C EGD+ KA  F  +MVE                    N F PD   C  ++    
Sbjct: 567 IHAYCKEGDLEKAFQFHNKMVE--------------------NSFKPDVVTCNTLMNGLC 606

Query: 620 QGGDLGSVFELAAVMIKSG 638
             G L    +L    ++ G
Sbjct: 607 LYGRLEKAMKLFESWVEKG 625



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 208/421 (49%), Gaps = 18/421 (4%)

Query: 240 AYSVLLSSMCKSGRIDE--ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           A + +LS++ +S       +L   + + A+ L P+  T+++L+   C +  +  A+   +
Sbjct: 174 AANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLS 233

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M    +SP++  +  +L   C K M+ EAR     +     +     YN ++  Y +LG
Sbjct: 234 KMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLG 293

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL-EPSAVTY 416
            I +A  +   +      P + T+N L  G C+ GKV +A +L D ++  G+  P  VTY
Sbjct: 294 WIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTY 353

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T ++A  +       L LL+EM  K +  + VT+ +++KGLC++ +L+EA+  LE M  
Sbjct: 354 NTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTE 413

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+TPD ITYNT+I + CK  ++ KAF L+++M    L+  + T N L+  LC     + 
Sbjct: 414 EGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEE 473

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---K 593
           A+ LL +  +      +V+Y T++ A+  E     A+  + +M+++    SI  Y    K
Sbjct: 474 AEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIK 533

Query: 594 SFFCM------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
               M            ++  G  PD     +++ A+ + GDL   F+    M+++   P
Sbjct: 534 GLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKP 593

Query: 642 D 642
           D
Sbjct: 594 D 594



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 229/504 (45%), Gaps = 40/504 (7%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDI-KVS 57
           L   Y+R G +  A  V+  M     +  + TYN L   L      D  + L D++ ++ 
Sbjct: 285 LVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLG 344

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +V T + ++D   +  R  DA+  L+E   K    S+V+ N I+   C+ G  E A
Sbjct: 345 IVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEA 404

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
            G   +M + GL PD  +YN LI   C AG++ +A    ++M R G++ D  T + L   
Sbjct: 405 LGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYN 464

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                +   A ++++    +G  PD V+Y  ++  Y +    E  L L + M+ +    +
Sbjct: 465 LCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPS 524

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +  Y+ L+  +   G++ EA+  L E+  +GL PD  TY+I+I   CK+  + KA Q +N
Sbjct: 525 ISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHN 584

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M      P+      ++ GLC    + +A   F+S +      DV+ YN +I    K  
Sbjct: 585 KMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDN 644

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI----KLHG--LEP 411
           ++  A++ +  +  + + P + T+N L+    + G+  +A+++L  +    KL+G    P
Sbjct: 645 DVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYP 704

Query: 412 S------AV------------------------TYTTFMNAYCEEGNIQRLLALLQEMET 441
           S      AV                        +Y  ++   C  G ++   A+L EM  
Sbjct: 705 SIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQ 764

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQ 465
           K +   + TY  +++GL K+ K Q
Sbjct: 765 KGMSVDNSTYITLMEGLIKRQKRQ 788



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 134/287 (46%), Gaps = 21/287 (7%)

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           ++  +  LI  R+ P+  TFN L++  C  G +ADA   L  ++  GL P AVTY T +N
Sbjct: 193 SLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLN 252

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           A+C +G +     LL  M+ + I PT  TY  ++    +   +++A  ++E M   G  P
Sbjct: 253 AHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEP 312

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQM-WLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           D  TYN +    C+   + +AF+L ++M  L  + P   TYN L+D         +A  L
Sbjct: 313 DLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNL 372

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
           L  ++E  +  + V +  I+K  C EG + +A+     M E+G                 
Sbjct: 373 LEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLT--------------- 417

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                PD      ++ A  + G++   F L   M++SGL  D F +N
Sbjct: 418 -----PDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLN 459


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 188/668 (28%), Positives = 320/668 (47%), Gaps = 29/668 (4%)

Query: 1    MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
            +L  VY + GM+  AV     +  +  K S+ T N +L ++   + T+++W L+ ++   
Sbjct: 919  LLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK 978

Query: 58   ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
                NV T +I+I+GLC +  L+ A   L++     F P++V+ N +++ YCK G  + A
Sbjct: 979  GICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 1038

Query: 118  KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              L   M+  G+  D  +YN+ I  LC      +A      M +  + P+ +TY+ L  G
Sbjct: 1039 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 1098

Query: 178  FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
            F    +I  A +V  ++      P+ VTY  LI G+C +G+ EE L+L + M + G +LN
Sbjct: 1099 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 1158

Query: 238  VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
             + Y  LL+ +CK  + + A  LL  M    +    + Y++LI GLCK   + +A+QL  
Sbjct: 1159 EVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVG 1218

Query: 298  EMCSKRISPNSFAHGAILLGLCEKEMITEA-----RMYFDSLIMSNCIQDVVLYNIMIDG 352
             M    ++P+   + +++ G C    I  A     RMY   L+++  I   ++YN     
Sbjct: 1219 NMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYN----- 1273

Query: 353  YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
            + + GN+ EA+++Y  +          T N L+   C++GK+ +A + L  +   GL P+
Sbjct: 1274 FCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPN 1333

Query: 413  AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            ++TY   +N Y   G+     +   +M      P+  TY  ++KGLCK   L EA + L 
Sbjct: 1334 SITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLN 1393

Query: 473  DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
             ++ I    D + YNT++   CK  +L +A  L ++M  +N+ P S TY+ L+ GLC  G
Sbjct: 1394 RLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKG 1453

Query: 533  DLKNADCLL-VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------F 584
                A CL   ++    +    V YT ++      G    A  FF +M++KG       F
Sbjct: 1454 KAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAF 1513

Query: 585  EISIRDYTK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
               I   ++         FF  M   G  P+     ++L  F +   L     L + M++
Sbjct: 1514 NAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMR 1573

Query: 637  SGLLPDKF 644
             G+ PDK 
Sbjct: 1574 EGIFPDKL 1581



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 157/654 (24%), Positives = 288/654 (44%), Gaps = 21/654 (3%)

Query: 10   GMVHDAVFVIAKMKELDLKVSIQTYNSLL----YNLRHTDIMWDLYDDIKVSETPRNVYT 65
            G +  A  ++ +M+E     +I TYN+LL       R+   + +L D +       +V T
Sbjct: 998  GNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI-ELIDYMICKGIEADVCT 1056

Query: 66   NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
             ++ ID LC   R   A L L++   +   P+ V+ N +++ + K G   VA  +F  M 
Sbjct: 1057 YNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMS 1116

Query: 126  KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
            K+ L P+  +YN LI G C  G  EEAL   + M   G+  + +TY  L  G     +  
Sbjct: 1117 KFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFE 1176

Query: 186  GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
             A ++++++ +       + YTVLI G C+ G ++E ++L   M   G   +VI YS L+
Sbjct: 1177 LAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLI 1236

Query: 246  SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
            +  C+ G I  A  ++  M   GL  + + YS LI   C+   V +A+++Y  M      
Sbjct: 1237 NGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHG 1296

Query: 306  PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
             + F    ++  LC    + EA  +   +     + + + Y+ +I+GY  +G+   A   
Sbjct: 1297 ADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSF 1356

Query: 366  YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
            +  +I+    PS  T+ SL+ G CK G + +A++ L+ +        +V Y T +   C+
Sbjct: 1357 FDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCK 1416

Query: 426  EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT-PDQI 484
             GN+   +AL  +M    + P   TY+ ++ GLC++ K   AV L       G   P+ +
Sbjct: 1417 SGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHV 1476

Query: 485  TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
             Y  ++    K    + AF    +M      P +  +N +ID     G +  A+    ++
Sbjct: 1477 MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 1536

Query: 545  QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF---------------EISIR 589
            +   +      Y  ++     +  + + ++ +  M+ +G                +  I 
Sbjct: 1537 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 1596

Query: 590  DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
            D        M+  G   DQ    +++  + + G +   F+L   M   G+ PD+
Sbjct: 1597 DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDR 1650



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 235/487 (48%), Gaps = 39/487 (8%)

Query: 100  SLNAIMSRYCKLGFAEVAKGLF-CLMLKYGLHPDAFS-YNILIHGLCIAGSMEEALEFTN 157
            S  +I+   C++G    +K +F  LM  Y L     S +++LI      G ++ A+E   
Sbjct: 881  SAKSILRHLCQMGIG--SKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFE 938

Query: 158  DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
             +G  G +P   T +++        +    W + +++  KG  P++ T+ +LI G C  G
Sbjct: 939  LVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEG 998

Query: 218  NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            N+++   L + M   GF   ++ Y+ LL+  CK GR   A+ L+  M   G++ D+ TY+
Sbjct: 999  NLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYN 1058

Query: 278  ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            + I  LC   +  KA  L  +M  + ISPN                              
Sbjct: 1059 VFIDNLCTNHRSAKAYLLLKKMRKEMISPNE----------------------------- 1089

Query: 338  NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
                  V YN +I+G+VK G IG A Q++ ++ +  +SP+ VT+N+LI G C  G   +A
Sbjct: 1090 ------VTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEA 1143

Query: 398  RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             RLLD ++  GL  + VTY T +N  C+    +    LL+ M    +   H+ YTV+I G
Sbjct: 1144 LRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDG 1203

Query: 458  LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
            LCK   L EAVQL+ +MY  GV PD ITY+++I  FC+  +++ A +++ +M+   L   
Sbjct: 1204 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 1263

Query: 518  SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
               Y+ LI   C +G++  A  +   +  +           ++ + C +G + +A  F C
Sbjct: 1264 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 1323

Query: 578  QMVEKGF 584
             M   G 
Sbjct: 1324 HMSRIGL 1330



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 163/693 (23%), Positives = 309/693 (44%), Gaps = 58/693 (8%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHT--DIMWDLYDDIKVSETPRN 62
            +   G   +A+ ++  M+   L+++  TY +LL  L +H   ++   L + ++V++    
Sbjct: 1134 HCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVG 1193

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
                +++IDGLC+   L +A+  +         P V++ +++++ +C++G  + AK + C
Sbjct: 1194 HIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIIC 1253

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             M + GL  +   Y+ LI+  C  G++ EA++    M  +G   D  T ++L        
Sbjct: 1254 RMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDG 1313

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            ++  A K +  +   G  P+ +TY  +I GY  IG+        + M+  G   +   Y 
Sbjct: 1314 KLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYG 1373

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             LL  +CK G + EA   L  +  +    D V Y+ L+   CK   +H+A+ L+++M   
Sbjct: 1374 SLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQN 1433

Query: 303  RISPNSFAHGAILLGLCEK-EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             + P+S+ + ++L GLC K + +T   ++  ++       + V+Y  ++DG  K G+   
Sbjct: 1434 NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKA 1493

Query: 362  AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            A   + ++++K   P  V FN++I    + G++  A     T++  G+ P+  TY   ++
Sbjct: 1494 AFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLH 1553

Query: 422  AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW------------------- 462
             + ++  + R L+L   M  + I P  +T+  +I GL K                     
Sbjct: 1554 GFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLA 1613

Query: 463  ----------------KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
                            K+++A  L+  M  +GV PD+ TYN I     K    R++  +L
Sbjct: 1614 DQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVL 1673

Query: 507  NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA--HC 564
            ++M  + + P  A Y  LI+G+C  GD++ A  L   ++       +VA + +++   HC
Sbjct: 1674 HEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHC 1733

Query: 565  AEGDVHKAMTFFCQMVEKGFEISIRDYTKSF--FC-------------MMLSNGFPPDQE 609
              G    AM     M+      +I  +T     FC             +M   G   D  
Sbjct: 1734 --GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVV 1791

Query: 610  ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
               V+++     GD  + FEL   M    L P+
Sbjct: 1792 AYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 1824



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 147/618 (23%), Positives = 278/618 (44%), Gaps = 39/618 (6%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIM--WDLYDDIKVSETPRN 62
            + R G +  A  +I +M    L ++   Y++L+YN  +H ++     +Y  +  +    +
Sbjct: 1239 FCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGAD 1298

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +T ++++  LC+  +L +A  FL   +     P+ ++ + I++ Y  +G    A   F 
Sbjct: 1299 HFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFD 1358

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN------------------------- 157
             M+K G HP  F+Y  L+ GLC  G++ EA +F N                         
Sbjct: 1359 DMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSG 1418

Query: 158  ----------DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTY 206
                       M ++ V PD+ TYS L  G     +   A  +    + +G+  P+ V Y
Sbjct: 1419 NLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMY 1478

Query: 207  TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            T L+ G  + G+ +      E M+ +G   + +A++ ++ S  + G++ +A      M  
Sbjct: 1479 TCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRW 1538

Query: 267  VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
             G+ P+L TY+IL+ G  K+  + + + LY+ M  + I P+     +++LGL +  +   
Sbjct: 1539 WGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDL 1598

Query: 327  ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
                   +IM   + D   +NI+I+ Y + G + +A  L   +    + P   T+N +  
Sbjct: 1599 GVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFN 1658

Query: 387  GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
            G  K     ++  +L  +  +G+ P    Y T +N  C  G+IQ    L  EME    G 
Sbjct: 1659 GLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGS 1718

Query: 447  THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              V  + +++GL    K ++A+ +L+ M  + + P   T+ T++  FC+   + +A +L 
Sbjct: 1719 HEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLK 1778

Query: 507  NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
              M L  L+     YN+LI G+C NGD   A  L   ++  ++      Y  ++ A  A 
Sbjct: 1779 GVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAA 1838

Query: 567  GDVHKAMTFFCQMVEKGF 584
             ++ +       + E+G 
Sbjct: 1839 NNLIQGEKLLTDLQERGL 1856



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 210/437 (48%), Gaps = 20/437 (4%)

Query: 206  YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
            + +LI  Y + G ++  ++  E++   GFK +V   +++L+SM K  R +    L  EM 
Sbjct: 917  FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 976

Query: 266  AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
              G+ P++ T++ILI GLC +  + KA  L  +M      P    +  +L   C+K    
Sbjct: 977  DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 1036

Query: 326  EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
             A    D +I      DV  YN+ ID         +A  L +++ ++ ISP+ VT+N+LI
Sbjct: 1037 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 1096

Query: 386  YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
             GF K GK+  A ++ + +    L P+ VTY   +  +C  G+ +  L LL  ME   + 
Sbjct: 1097 NGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLR 1156

Query: 446  PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
               VTY  ++ GLCK  K + A +LLE M V  +    I Y  +I   CK   L +A QL
Sbjct: 1157 LNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQL 1216

Query: 506  LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
            +  M+   + P   TY+ LI+G C  G++K+A  ++  +    + L K+ Y+T+I   C 
Sbjct: 1217 VGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQ 1276

Query: 566  EGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
             G+V +AM                      + +M  NG   D   C V++ +  + G LG
Sbjct: 1277 HGNVTEAM--------------------KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 1316

Query: 626  SVFELAAVMIKSGLLPD 642
               +    M + GL+P+
Sbjct: 1317 EAEKFLCHMSRIGLVPN 1333


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 163/565 (28%), Positives = 285/565 (50%), Gaps = 19/565 (3%)

Query: 78  RLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           RL D  L L      E     PS+ S N ++     LG     +  F ++   G  PD F
Sbjct: 106 RLPDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTF 165

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEP-DAITYSILAKGFHLLSQISGAWKVIQK 193
           ++N  +     AG + EA+     MGR G  P +A +Y+++  G     +   A +V  +
Sbjct: 166 AWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDE 225

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +  +   P+ +TY  +I G+ + G++E G +LR+ M+  G K N I Y+VLLS +C++GR
Sbjct: 226 MTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGR 285

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           + E   LL EM +  + PD  TYSIL  GL +       + L+ +     ++   +    
Sbjct: 286 MGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSI 345

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           +L GLC+   ++ A     SL+ +  +   V+YN +I+GY + G +  A   + Q+  + 
Sbjct: 346 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 405

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           I P  +T+N+LI G CK  ++ +A+ LL  ++ +G+ P+  T+ T ++AY   G +++  
Sbjct: 406 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 465

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            +L EM+   + P  V+Y  ++   CK  K+ EAV +L+DM+   V P+   YN II ++
Sbjct: 466 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 525

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
            +     +AF L+ +M  + + P+  TYN+LI GLC    +  A+ ++ SL  H +    
Sbjct: 526 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 585

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCM 598
           V+Y T+I A C  G++ KA+    +M + G + ++R Y +                 +  
Sbjct: 586 VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQK 645

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGD 623
           M+ N   P   I  +M+ A+ + G+
Sbjct: 646 MMQNNVVPSNAIHNIMVEAYSKYGN 670



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 252/487 (51%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+  S N +++   + G    A  +F  M +  + P+  +YN +I G    G +E     
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + M  HG++P+AITY++L  G     ++     ++ ++  +   PD  TY++L  G  +
Sbjct: 258 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 317

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G+ +  L L    L  G  +     S+LL+ +CK G++  A  +L  +   GL P  V 
Sbjct: 318 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 377

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G C+  ++  A   + +M S+ I P+   + A++ GLC+ E IT A+     + 
Sbjct: 378 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 437

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            +     V  +N +ID Y + G + +   +  ++ E  + P++V++ S++  FCKNGK+ 
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 497

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  +LD +    + P+A  Y   ++AY E G   +   L+++M++  I P+ VTY ++I
Sbjct: 498 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 557

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           KGLC Q ++ EA +++  +    + PD ++YNT+I + C   ++ KA  L  +M  + ++
Sbjct: 558 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 617

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
            T  TY+ LI GL   G L   + L   + ++N+  +   +  +++A+   G+  KA   
Sbjct: 618 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDL 677

Query: 576 FCQMVEK 582
             +M++K
Sbjct: 678 RKEMLQK 684



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 234/485 (48%), Gaps = 35/485 (7%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N ++ ++VI G+ +  R  DA+    E   +   P+ ++ N ++  + K G  E    
Sbjct: 197 PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR 256

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M+ +GL P+A +YN+L+ GLC AG M E     ++M    + PD  TYSIL  G  
Sbjct: 257 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 316

Query: 180 -------LLS----------------------------QISGAWKVIQKLLIKGSDPDIV 204
                  +LS                            ++S A +V+Q L+  G  P  V
Sbjct: 317 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 376

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            Y  LI GYCQ G +E        M S+  K + I Y+ L++ +CK+ RI  A  LL EM
Sbjct: 377 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 436

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           +  G+ P + T++ LI    +  ++ K   + +EM    + PN  ++G+I+   C+   I
Sbjct: 437 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 496

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            EA    D +   + + +  +YN +ID YV+ G   +A  L  ++    ISPSIVT+N L
Sbjct: 497 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 556

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G C   ++++A  +++++  H L P AV+Y T ++A C  GNI + L L Q M    I
Sbjct: 557 IKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 616

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
             T  TY  +I GL    +L E   L + M    V P    +N ++ ++ K  +  KA  
Sbjct: 617 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 676

Query: 505 LLNQM 509
           L  +M
Sbjct: 677 LRKEM 681



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 218/473 (46%), Gaps = 38/473 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL-YNLRHTDIM--WDLYDDIKVSETPRNVY 64
           R G   DAV V  +M E  +  +  TYN+++  +++  D+   + L D +       N  
Sbjct: 212 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAI 271

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGP-------------------SVVSL---- 101
           T ++++ GLC+  R+ +    L E A ++  P                   +++SL    
Sbjct: 272 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 331

Query: 102 ------------NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                       + +++  CK G   +A+ +   ++  GL P    YN LI+G C  G +
Sbjct: 332 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 391

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           E A      M    ++PD ITY+ L  G     +I+ A  ++ ++   G +P + T+  L
Sbjct: 392 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 451

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I  Y + G +E+   +   M   G K NV++Y  ++++ CK+G+I EA+ +L +M    +
Sbjct: 452 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 511

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P+   Y+ +I    +     +A  L  +M S  ISP+   +  ++ GLC +  I+EA  
Sbjct: 512 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 571

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             +SL     I D V YN +I      GNI +A+ L +++ +  I  ++ T++ LI G  
Sbjct: 572 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLG 631

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
             G++ +   L   +  + + PS   +   + AY + GN  +   L +EM  K
Sbjct: 632 GAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 171/345 (49%), Gaps = 35/345 (10%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           YT SI+++GLC+  ++  A   LQ        P+ V  N +++ YC+ G  E A   F  
Sbjct: 341 YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 400

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M    + PD  +YN LI+GLC A  +  A +   +M  +GV P   T++ L   +    Q
Sbjct: 401 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 460

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +   + V+ ++   G  P++V+Y  ++  +C+ G + E + + + M  +    N   Y+ 
Sbjct: 461 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 520

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ +  + G  D+A  L+ +M++ G+ P +VTY++LI+GLC Q ++ +A ++ N + + R
Sbjct: 521 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 580

Query: 304 ISPNSFAHGAILLGLCEKEMITEA-----RMY---------------------------- 330
           + P++ ++  ++   C +  I +A     RM+                            
Sbjct: 581 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 640

Query: 331 --FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
             +  ++ +N +    ++NIM++ Y K GN  +A  L +++++KR
Sbjct: 641 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 685



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 152/334 (45%), Gaps = 16/334 (4%)

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL-IEKRISPSIVTFNS 383
            + R  F  L  +    D   +N  +   V  G++GEAV + R++  +    P+  ++N 
Sbjct: 146 ADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNV 205

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           +I G  + G+  DA  + D +    + P+ +TY T ++ + + G+++    L  +M    
Sbjct: 206 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 265

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           + P  +TY V++ GLC+  ++ E   LL++M    + PD  TY+ +     +  D +   
Sbjct: 266 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 325

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L  +   + +     T +IL++GLC +G +  A+ +L SL    +  T+V Y T+I  +
Sbjct: 326 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 385

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQ 608
           C  G++  A + F QM  +  +     Y                +     M  NG  P  
Sbjct: 386 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 445

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           E    ++ A+ + G L   F + + M ++GL P+
Sbjct: 446 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 479



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 141/305 (46%), Gaps = 11/305 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSE 58
           Y +TG +  A     +MK   +K    TYN+L+  L          D++ ++ D+  V+ 
Sbjct: 385 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN-GVNP 443

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           T   V T + +ID   +  +L+   + L E       P+VVS  +I++ +CK G    A 
Sbjct: 444 T---VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 500

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +   M    + P+A  YN +I      G  ++A      M  +G+ P  +TY++L KG 
Sbjct: 501 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 560

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
              SQIS A ++I  L      PD V+Y  LI   C  GN+++ L L++ M   G K  V
Sbjct: 561 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTV 620

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y  L+S +  +GR++E   L  +M    + P    ++I++    K     KA  L  E
Sbjct: 621 RTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKE 680

Query: 299 MCSKR 303
           M  KR
Sbjct: 681 MLQKR 685



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 124/290 (42%), Gaps = 20/290 (6%)

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           PS+ + N L+      G+ AD RR    +   G  P    +   + A    G++   + +
Sbjct: 127 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 186

Query: 436 LQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L+ M    A  P   +Y VVI G+ +  +  +AV++ ++M    V P+ ITYNT+I    
Sbjct: 187 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 246

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K  DL   F+L +QM  H L+P + TYN+L+ GLC  G +     LL  +    +     
Sbjct: 247 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 306

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC----------------- 597
            Y+ +       GD    ++ F + ++ G  ++I DYT S                    
Sbjct: 307 TYSILFDGLSRNGDSKAMLSLFGKYLKNG--VTIGDYTCSILLNGLCKDGKVSIAEEVLQ 364

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            +++ G  P + I   ++  + Q G+L   F     M    + PD    N
Sbjct: 365 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 414


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 270/532 (50%), Gaps = 16/532 (3%)

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           +G+  D   YN L++ L     M+      ++MG  G++PD +T++ L K      Q+  
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  +++++  +G  PD  T+T L+ G+ + G++E  L+++  ML  G     +  +VL++
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             CK GR+++ALG + +  A G +PD +TY+  + GLC+ D V  A+++ + M  +   P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           + F +  ++  LC+   + EA+   + ++   C+ D+  +N +I        + EA+ L 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           RQ+  K +SP + TFN LI   CK G    A RL + +K  G  P  VTY T ++  C  
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G + + L LL++ME+     + +TY  +I GLCK+ +++EA ++ + M + G++ + IT+
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           NT+I   CK K +  AF L+NQM    L+P + TYN ++   C  GD+K A  +L ++  
Sbjct: 500 NTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------------- 593
           +   +  V Y T+I   C  G    A+     M  KG   + + Y               
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 619

Query: 594 --SFFCMMLSNGFPPDQEICEVMLIAF-HQGGDLGSVFELAAVMIKSGLLPD 642
             S F  M   G PPD    +++       GG +   F+    M+  G +P+
Sbjct: 620 ALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/584 (27%), Positives = 287/584 (49%), Gaps = 39/584 (6%)

Query: 6   YSRTGMVHDAV-FVIAKMKEL-DLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETP 60
           Y    +  DAV  ++ +++ L  ++     YN LL  L       ++  +Y ++      
Sbjct: 119 YEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIK 178

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            +V T + ++  LC+  +++ A+L L+E + +   P   +   +M  + + G  E A  +
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              ML+ G      + N+LI+G C  G +E+AL +       G EPD ITY+    G   
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A KV+  ++ +G DPD+ TY +++   C+ G +EE   +   M+ +G   ++  
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++ L++++C   R++EAL L  ++   G+ PD+ T++ILI  LCK    H A++L+ EM 
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +   +P+   +  ++  LC    + +A      +  + C +  + YN +IDG  K   I 
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA +++ Q+  + IS + +TFN+LI G CK+ K+ DA  L++ +   GL+P+ +TY + +
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSIL 538

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             YC++G+I++   +L+ M         VTY  +I GLCK  + Q A+++L  M + G+ 
Sbjct: 539 THYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMR 598

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P    YN +++S  +  ++R A  L  +M      P + TY I+  GLC  G        
Sbjct: 599 PTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG-------- 650

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
                                     G + +A  F  +MV+KGF
Sbjct: 651 --------------------------GPIKEAFDFMLEMVDKGF 668



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 20/306 (6%)

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D V+YN +++  V+   +     +Y ++  + I P +VTFN+L+   C+  +V  A  +L
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           + +   G+ P   T+TT M  + EEG+I+  L +   M       T VT  V+I G CK 
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++++A+  ++     G  PDQITYNT +   C+   +  A ++++ M     +P   TY
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 324

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           NI+++ LC NG L+ A  +L  + +         + T+I A C    + +A+    Q+  
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           KG                      PD     +++ A  + GD      L   M  SG  P
Sbjct: 385 KGVS--------------------PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424

Query: 642 DKFLIN 647
           D+   N
Sbjct: 425 DEVTYN 430



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 15/257 (5%)

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           L G++   V Y   +N   E   ++ L ++  EM  + I P  VT+  ++K LC+  +++
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
            AV +LE+M   GV PD+ T+ T+++ F +   +  A ++  +M       T  T N+LI
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           +G C  G +++A   +           ++ Y T +   C    V  A+     MV++G +
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318

Query: 586 ISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
             +  Y                K     M+  G  PD      ++ A   G  L    +L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 631 AAVMIKSGLLPDKFLIN 647
           A  +   G+ PD +  N
Sbjct: 379 ARQVTVKGVSPDVYTFN 395


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 155/561 (27%), Positives = 275/561 (49%), Gaps = 16/561 (2%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+  + NAIM       + + A  ++  ML  G+ PDA ++ + I   CI G    AL  
Sbjct: 8   PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRL 67

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              +   G +   + Y  + +G +       A  +  ++L +   PD+ T+  ++   CQ
Sbjct: 68  LRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQ 127

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G++ E   L   +L +G  +N    ++ +  +C+ GR++EA+ L+  M+A  + PD+VT
Sbjct: 128 KGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVT 186

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ L+RGLCK  KV +A Q    M ++   P+ F +  I+ G C+++M+ EA       I
Sbjct: 187 YNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAI 246

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
               + D V Y  +I+G    G++  A++L+ +   K + P +V +NSL+ G C+ G + 
Sbjct: 247 FKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLIL 306

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A ++++ +   G  P   TY   +N  C+ GNI     ++ +   K   P   T+  +I
Sbjct: 307 HALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMI 366

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G CK+ KL  A+QL+E M++ G+ PD ITYN+++   CK    ++  +   +M L    
Sbjct: 367 DGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 426

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P + TYNILI+  C    L+ A  ++V + +  +    +++ T+I   C  GD+  A   
Sbjct: 427 PNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLL 486

Query: 576 FCQMVEKG-------FEISIRDYT--------KSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
           F ++ EKG       F I I  Y+        +  F  M+S G+ PD     V++    +
Sbjct: 487 FQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCK 546

Query: 621 GGDLGSVFELAAVMIKSGLLP 641
             ++   +   A M+  G +P
Sbjct: 547 AANVDRAYVHLAEMVSKGFVP 567



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 150/564 (26%), Positives = 276/564 (48%), Gaps = 4/564 (0%)

Query: 33  TYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
            YN++   L N  + D    +Y  +  +    +  T+++ I   C   R   A+  L+  
Sbjct: 12  AYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSL 71

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             +      ++   ++      G    A+ LF  ML+  + PD  ++N ++H LC  G +
Sbjct: 72  PERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDI 131

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
            E+      + + G+  +  T +I  +G     ++  A  +++ +    + PD+VTY  L
Sbjct: 132 MESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIA-PDVVTYNTL 190

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + G C+   V+E  +    M++QG   +   Y+ ++   CK   + EA  LL +    G 
Sbjct: 191 MRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGF 250

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            PD VTY  LI GLC +  V +A++L+NE  +K + P+   + +++ GLC + +I  A  
Sbjct: 251 VPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQ 310

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             + ++   C  D+  YNI+I+G  K+GNI +A  +    I K   P + TFN++I G+C
Sbjct: 311 VMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYC 370

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K  K+  A +L++ + ++G+ P A+TY + +N  C+ G  + +    +EM  K   P  +
Sbjct: 371 KRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAI 430

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY ++I+  CK  +L+EA  ++  M   G+ PD I++NT+I  FC+  DL  A+ L  ++
Sbjct: 431 TYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKL 490

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
                  T+ T+NILI       +++ A+ +   +           Y  ++   C   +V
Sbjct: 491 DEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANV 550

Query: 570 HKAMTFFCQMVEKGFEISIRDYTK 593
            +A     +MV KGF  S+  + +
Sbjct: 551 DRAYVHLAEMVSKGFVPSMATFGR 574



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 257/522 (49%), Gaps = 1/522 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           V+ GL       DA     E   ++  P V + N ++   C+ G    +  L   +LK G
Sbjct: 86  VVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRG 145

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           +  + F+ NI I GLC  G +EEA+     M  + + PD +TY+ L +G    S++  A 
Sbjct: 146 MSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAA 204

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           + +++++ +G  PD  TY  +I GYC+   ++E  +L +  + +GF  + + Y  L++ +
Sbjct: 205 QYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGL 264

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C  G ++ AL L  E +A  LKPDLV Y+ L++GLC+Q  +  A+Q+ NEM      P+ 
Sbjct: 265 CAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDI 324

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           + +  ++ GLC+   I++A +  +  I+   + DV  +N MIDGY K   +  A+QL  +
Sbjct: 325 WTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVER 384

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +    I+P  +T+NS++ G CK GK  +     + + L G  P+A+TY   +  +C+   
Sbjct: 385 MWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 444

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           ++    ++  M    + P  +++  +I G C+   L  A  L + +   G +    T+N 
Sbjct: 445 LEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 504

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I ++    +++ A ++  +M     +P   TY +L+DG C   ++  A   L  +    
Sbjct: 505 LIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKG 564

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
              +   +  ++ +      V +A+     MV  G    + D
Sbjct: 565 FVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVVD 606



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 243/499 (48%), Gaps = 15/499 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T + ++ GLC+ S++Q+A  +L+    +   P   + N I+  YCK    + A  L 
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELL 242

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              +  G  PD  +Y  LI+GLC  G +E ALE  N+     ++PD + Y+ L KG    
Sbjct: 243 KDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQ 302

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             I  A +V+ +++  G  PDI TY ++I G C++GN+ +   +    + +G+  +V  +
Sbjct: 303 GLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTF 362

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++   CK  ++D AL L+  M   G+ PD +TY+ ++ GLCK  K  +  + + EM  
Sbjct: 363 NTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMIL 422

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   PN+  +  ++   C+   + EA      +     + D + +N +I G+ + G++  
Sbjct: 423 KGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDG 482

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+++L EK  S +  TFN LI  +     +  A ++   +   G +P   TY   ++
Sbjct: 483 AYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVD 542

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+  N+ R    L EM +K   P+  T+  V+  L    ++ EAV ++  M  +GV P
Sbjct: 543 GSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVP 602

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG--------D 533
           + +  +TI+ +    K    A ++L +  +     +  TY +L +G+  N          
Sbjct: 603 EVV--DTILSTD---KKEIAAPKILVEELMKKGHISYPTYEVLHEGVRDNKLTRKARKWR 657

Query: 534 LKNADCLLVSLQEHNISLT 552
           L + DC+  +   H IS +
Sbjct: 658 LSDPDCM--NTTTHGISYS 674



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 178/399 (44%), Gaps = 16/399 (4%)

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M+  G  P    Y+ ++  L       +A ++Y  M S  ++P++  H   +   C    
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
              A     SL    C    + Y  ++ G    G+  +A  L+ +++ + + P + TFN+
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           +++  C+ G + ++  LL  +   G+  +  T   ++   CE G ++  +AL++ M+   
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY- 179

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           I P  VTY  +++GLCK  K+QEA Q L  M   G  PD  TYNTII  +CK   L++A 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           +LL         P   TY  LI+GLC  GD++ A  L    Q  ++    V Y +++K  
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCMM-------------LSNGFPPDQ 608
           C +G +  A+    +MVE G    I  Y    +  C M             +  G+ PD 
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                M+  + +   L S  +L   M   G+ PD    N
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYN 398



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 171/338 (50%), Gaps = 3/338 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMWDL--YDDIKVSETPRNVYTN 66
           G V  A+ +  + +  DLK  +  YNSL+  L R   I+  L   +++       +++T 
Sbjct: 268 GDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTY 327

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +IVI+GLC+   + DA + + +   K + P V + N ++  YCK    + A  L   M  
Sbjct: 328 NIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWM 387

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           YG+ PDA +YN +++GLC AG  +E  E   +M   G  P+AITY+IL + F  ++Q+  
Sbjct: 388 YGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEE 447

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  VI ++   G  PD +++  LI G+C+ G+++    L + +  +G+      +++L+ 
Sbjct: 448 ASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIG 507

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           +      +  A  +  EM + G KPDL TY +L+ G CK   V +A     EM SK   P
Sbjct: 508 AYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVP 567

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           +    G +L  L     ++EA      ++    + +VV
Sbjct: 568 SMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV 605


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 156/493 (31%), Positives = 263/493 (53%), Gaps = 3/493 (0%)

Query: 96  PSVVSLNAIMSRYCKLG--FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           PS+ + NA++S   +      + +  +F  +++  LHP+ +++N+L+H  C  G++ +AL
Sbjct: 169 PSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADAL 228

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
              + M   G+ PDA+TY+ L         +  A  ++ ++   G  P   TY  L+  +
Sbjct: 229 ATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAF 288

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK-PD 272
            ++G +++  K+ E M + GF+ ++  Y+VL   +C++G++DEA  L  EME +G   PD
Sbjct: 289 ARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPD 348

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY+ L+    K      A++L  EM  K + P    H  ++  LC++  + EA    +
Sbjct: 349 VVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLE 408

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +       DV+ YN +ID Y K GN+ +A  L  +++ K +     T N+++Y  CK  
Sbjct: 409 KIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMK 468

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           +  DA  LL +    G  P  V+Y T M AY +E N +  L L  +M  + + P+  TY 
Sbjct: 469 RYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYN 528

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +IKGLC+  +L+EA+  L +    G+ PD+ TYN II ++CK  DL  AF+  N+M  +
Sbjct: 529 TLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVEN 588

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
           + +P   T N L++GLC++G L  A  L  S  E    +  + Y T+I++ C  GDV  A
Sbjct: 589 SFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTA 648

Query: 573 MTFFCQMVEKGFE 585
           + FF  M  KG +
Sbjct: 649 LHFFDDMEVKGLQ 661



 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 162/572 (28%), Positives = 284/572 (49%), Gaps = 7/572 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELD-LKVSIQTYNSLLYNLRHT-----DIMWDLYDDIKVSE 58
            Y+R  + H A  ++  ++    ++ S+Q  N++L  L  +         D++  +    
Sbjct: 144 AYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELR 203

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              N YT ++++   C +  L DA+  L    G    P  V+ N +++ +C+ G    A+
Sbjct: 204 LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 263

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M + G+ P   +YN L+      G +++A +    M  +G EPD  TY++LA G 
Sbjct: 264 ALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGL 323

Query: 179 HLLSQISGAWKVIQKLLIKGSD-PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
               ++  A+++  ++   G+  PD+VTY  L+    +     + L+L E M  +G K  
Sbjct: 324 CQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPT 383

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           ++ +++++ S+CK G+++EALG L ++   GL PD++TY+ LI   CK   V KA  L +
Sbjct: 384 LVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMD 443

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  K +  ++F    +L  LC+ +   +A     S      + D V Y  ++  Y K  
Sbjct: 444 EMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEY 503

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N   A++L+ Q+IE+++ PSI T+N+LI G C+  ++ +A   L+     GL P   TY 
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYN 563

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++AYC+EG+++       +M   +  P  VT   ++ GLC   KL +A++L E     
Sbjct: 564 IIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEK 623

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G   D ITYNT+I+S CK  D+  A    + M +  L+P + TYN+++  L   G  + A
Sbjct: 624 GKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA 683

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
             +L  L +        A   +  +   E DV
Sbjct: 684 HNMLHKLADSGKLSQSFACPLLKPSSADEADV 715



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 146/598 (24%), Positives = 265/598 (44%), Gaps = 69/598 (11%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           +L   +   G + DA+  ++ M+   L     TYN+LL                      
Sbjct: 213 LLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLL---------------------- 250

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
                     +  C++  L +A   L         P+  + N ++S + +LG+ + A  +
Sbjct: 251 ----------NAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKV 300

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE-PDAITYSILAKGFH 179
              M  YG  PD  +YN+L  GLC AG ++EA    ++M R G   PD +TY+ L     
Sbjct: 301 VESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACF 360

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
                S A ++++++  KG  P +VT+ +++   C+ G +EE L   E +  +G   +VI
Sbjct: 361 KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI 420

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L+ + CK+G + +A  L+ EM   GLK D  T + ++  LCK  +   A +L +  
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP 480

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             +   P+  ++G ++    ++     A   +D +I    I  +  YN +I G  ++  +
Sbjct: 481 PQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERL 540

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA+    + +EK + P   T+N +I+ +CK G + +A R  + +  +  +P  VT  T 
Sbjct: 541 KEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           MN  C  G + + L L +    K      +TY  +I+ +CK   +  A+   +DM V G+
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN----------LEPTSA---------- 519
            PD  TYN ++ +  +     +A  +L+++              L+P+SA          
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEG 720

Query: 520 ----------------TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
                           TY   ++GLC  G LK A  +L  + +  + +    Y T+++
Sbjct: 721 KPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLME 778



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 223/483 (46%), Gaps = 27/483 (5%)

Query: 161 RHGVEPD----AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           R GV P         S L++    L Q S    V + L+     P+  T+ +L+  +C  
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQAS--LDVFRSLIELRLHPNHYTFNLLVHTHCSK 221

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G + + L     M   G   + + Y+ LL++ C+ G + EA  LL  M+  G+ P   TY
Sbjct: 222 GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTY 281

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA-RMYFDSLI 335
           + L+    +   + +A ++   M +    P+   +  + +GLC+   + EA R+  +   
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMER 341

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
           +   + DVV YN ++D   K     +A++L  ++ +K + P++VT N ++   CK GK+ 
Sbjct: 342 LGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLE 401

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A   L+ I   GL P  +TY T ++AYC+ GN+ +   L+ EM  K +     T   V+
Sbjct: 402 EALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVL 461

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             LCK  + ++A +LL      G  PD+++Y T++ ++ K  +   A +L +QM    L 
Sbjct: 462 YNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLI 521

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P+ +TYN LI GLC    LK A   L    E  +   +  Y  II A+C EGD+  A  F
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRF 581

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
             +MVE                    N F PD   C  ++      G L    +L    +
Sbjct: 582 HNKMVE--------------------NSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWV 621

Query: 636 KSG 638
           + G
Sbjct: 622 EKG 624



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 138/604 (22%), Positives = 251/604 (41%), Gaps = 112/604 (18%)

Query: 3   AFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSE---- 58
           A   S + +   ++ V   + EL L  +  T+N L++       + D    +   +    
Sbjct: 180 ALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGL 239

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           +P  V  N++ ++  C++  L +A   L         P+  + N ++S + +LG+ + A 
Sbjct: 240 SPDAVTYNTL-LNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQAT 298

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR----------------- 161
            +   M  YG  PD  +YN+L  GLC AG ++EA    ++M R                 
Sbjct: 299 KVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDA 358

Query: 162 -------------------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
                               GV+P  +T++I+ K      ++  A   ++K+  +G  PD
Sbjct: 359 CFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPD 418

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           ++TY  LI  YC+ GNV +   L + M+ +G K++    + +L ++CK  R ++A  LL+
Sbjct: 419 VITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLH 478

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
                G  PD V+Y  ++    K+     A++L+++M  +++ P+   +  ++ GLC  E
Sbjct: 479 SPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRME 538

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            + EA    +  +    + D   YNI+I  Y K G++  A + + +++E    P +VT N
Sbjct: 539 RLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCN 598

Query: 383 SLIYGFCKNGKVADARRLL-----------------------------------DTIKLH 407
           +L+ G C +GK+  A +L                                    D +++ 
Sbjct: 599 TLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVK 658

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQ------------------------------ 437
           GL+P A TY   ++A  E G  +    +L                               
Sbjct: 659 GLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEH 718

Query: 438 ------EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
                 E   KA      TY   + GLC   +L+EA  +L++M   G+  D  TY T++ 
Sbjct: 719 EGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLME 778

Query: 492 SFCK 495
              K
Sbjct: 779 GLIK 782



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 214/436 (49%), Gaps = 18/436 (4%)

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRI--DEALGLLYEMEAVGLKPDLVTYSILIRG 282
           L  +   +G + ++ A + +LS++ +S       +L +   +  + L P+  T+++L+  
Sbjct: 158 LHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHT 217

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
            C +  +  A+   + M    +SP++  +  +L   C K M+ EAR     +        
Sbjct: 218 HCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPT 277

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
              YN ++  + +LG I +A ++   +      P + T+N L  G C+ GKV +A RL D
Sbjct: 278 QPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKD 337

Query: 403 TIKLHGLE-PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
            ++  G   P  VTY T ++A  +       L LL+EM  K + PT VT+ +V+K LCK+
Sbjct: 338 EMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKE 397

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            KL+EA+  LE +   G+ PD ITYNT+I ++CK  ++ KAF L+++M    L+  + T 
Sbjct: 398 GKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTL 457

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N ++  LC     ++A+ LL S  +      +V+Y T++ A+  E +   A+  + QM+E
Sbjct: 458 NTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIE 517

Query: 582 KGFEISIRDYTK--SFFCMM-------------LSNGFPPDQEICEVMLIAFHQGGDLGS 626
           +    SI  Y       C M             +  G  PD+    +++ A+ + GDL +
Sbjct: 518 RKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLEN 577

Query: 627 VFELAAVMIKSGLLPD 642
            F     M+++   PD
Sbjct: 578 AFRFHNKMVENSFKPD 593



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 123/294 (41%), Gaps = 41/294 (13%)

Query: 39  YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSV 98
           YN      +WD   + K+  +   + T + +I GLC+  RL++AI  L E   K   P  
Sbjct: 503 YNPEPALRLWDQMIERKLIPS---ISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDE 559

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
            + N I+  YCK G  E A      M++    PD  + N L++GLC+ G +++AL+    
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFES 619

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
               G + D ITY+ L +    +  +  A      + +KG  PD  TY V++    + G 
Sbjct: 620 WVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGR 679

Query: 219 VEEGLKLREVM-----LSQGFKLNVI-------------------------------AYS 242
            EE   +   +     LSQ F   ++                                Y 
Sbjct: 680 SEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYM 739

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK--VHKAIQ 294
             L+ +C  G++ EA  +L EM   G+  D  TY  L+ GL K+ K   H A Q
Sbjct: 740 ERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQKRQTHAAGQ 793


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 162/533 (30%), Positives = 280/533 (52%), Gaps = 7/533 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQT--YN---SLLYNLRHTDIMWDLYDDIKVSET 59
            Y+ +  +H  +  +  + E D  V   T  YN   SLL       ++  L+  +     
Sbjct: 136 TYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAV 195

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P +V T +I+I  LC+  +L+ AIL L++       P   +   +M  + +    E A  
Sbjct: 196 PPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALR 255

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +  LM++ G    + S N+L++GLC  G +EEAL F  +    G  PD +T++ L  G  
Sbjct: 256 IKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLC 313

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               I    +++  +L KG + D+ TY  LI G C++G ++E +++   M+S+  + N +
Sbjct: 314 RTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTV 373

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L+ ++CK   ++ A  L   + + G+ PD+ T++ LI+GLC       A++L+ EM
Sbjct: 374 TYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEM 433

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K   P+ F +  ++  LC +  + EA M    + +S C ++VV+YN +IDG  K   +
Sbjct: 434 KEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRV 493

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           G+A  ++ Q+    +S S VT+N+LI G CK+ +V +A +L+D + + GL+P   TYTT 
Sbjct: 494 GDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTM 553

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +  +C++G+I+R   ++Q M      P  VTY  +I GLCK  ++  A +LL  + + G+
Sbjct: 554 LKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGM 613

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
                 YN +I++ CK K  ++A +L  +M      P   TY I+  GLC  G
Sbjct: 614 VLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGG 666



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 266/540 (49%), Gaps = 19/540 (3%)

Query: 120 LFCLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
           LF LM + + + PD   YN+ +  L  A  ++      + M    V PD  T++IL +  
Sbjct: 150 LFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRAL 209

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               Q+  A  +++ +   G  PD  T+T L+ G+ +  +VE  L+++E+M+  G +L  
Sbjct: 210 CKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTS 269

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           ++ +VL++ +CK GRI+EAL  +YE E  G  PD VT++ L+ GLC+   + + +++ + 
Sbjct: 270 VSVNVLVNGLCKEGRIEEALRFIYEEE--GFCPDQVTFNALVNGLCRTGHIKQGLEMMDF 327

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  K    + + + +++ GLC+   I EA      ++  +C  + V YN +I    K  +
Sbjct: 328 MLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENH 387

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +  A +L R L  K + P + TFNSLI G C       A  L + +K  G +P   TY+ 
Sbjct: 388 VEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSI 447

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            + + C E  ++  L LL+EME        V Y  +I GLCK  ++ +A  + + M ++G
Sbjct: 448 LIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLG 507

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           V+   +TYNT+I   CK K + +A QL++QM +  L+P   TY  ++   C  GD+K A 
Sbjct: 508 VSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAA 567

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK----- 593
            ++ ++  +      V Y T+I   C  G V  A      +  KG  ++ + Y       
Sbjct: 568 DIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQAL 627

Query: 594 ----------SFFCMMLSNGFPPDQEICEVMLIAF-HQGGDLGSVFELAAVMIKSGLLPD 642
                       F  M+  G PPD    +++     + GG +    +    M++ G+LP+
Sbjct: 628 CKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPE 687


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 163/565 (28%), Positives = 284/565 (50%), Gaps = 19/565 (3%)

Query: 78  RLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           RL D  L L      E     PS+ S N ++     LG     +  F ++   G  PD F
Sbjct: 102 RLPDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTF 161

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEP-DAITYSILAKGFHLLSQISGAWKVIQK 193
           ++N  +     AG + EA+     MGR G  P +A +Y+++  G     +   A +V  +
Sbjct: 162 AWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDE 221

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +  +   P+ +TY  +I G+ + G++E G  LR+ M+  G K N I Y+VLLS +C++GR
Sbjct: 222 MTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGR 281

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           + E   LL EM +  + PD  TYSIL  GL +       + L+ +     ++   +    
Sbjct: 282 MGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSI 341

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           +L GLC+   ++ A     SL+ +  +   V+YN +I+GY + G +  A   + Q+  + 
Sbjct: 342 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 401

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           I P  +T+N+LI G CK  ++ +A+ LL  ++ +G+ P+  T+ T ++AY   G +++  
Sbjct: 402 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 461

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            +L EM+   + P  V+Y  ++   CK  K+ EAV +L+DM+   V P+   YN II ++
Sbjct: 462 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 521

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
            +     +AF L+ +M  + + P+  TYN+LI GLC    +  A+ ++ SL  H +    
Sbjct: 522 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 581

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCM 598
           V+Y T+I A C  G++ KA+    +M + G + ++R Y +                 +  
Sbjct: 582 VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQK 641

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGD 623
           M+ N   P   I  +M+ A+ + G+
Sbjct: 642 MMQNNVVPSNAIHNIMVEAYSKYGN 666



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 252/487 (51%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+  S N +++   + G    A  +F  M +  + P+  +YN +I G    G +E     
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSL 253

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + M  HG++P+AITY++L  G     ++     ++ ++  +   PD  TY++L  G  +
Sbjct: 254 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 313

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G+ +  L L    L  G  +     S+LL+ +CK G++  A  +L  +   GL P  V 
Sbjct: 314 NGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 373

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G C+  ++  A   + +M S+ I P+   + A++ GLC+ E IT A+     + 
Sbjct: 374 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 433

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            +     V  +N +ID Y + G + +   +  ++ E  + P++V++ S++  FCKNGK+ 
Sbjct: 434 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 493

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  +LD +    + P+A  Y   ++AY E G   +   L+++M++  I P+ VTY ++I
Sbjct: 494 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 553

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           KGLC Q ++ EA +++  +    + PD ++YNT+I + C   ++ KA  L  +M  + ++
Sbjct: 554 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 613

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
            T  TY+ LI GL   G L   + L   + ++N+  +   +  +++A+   G+  KA   
Sbjct: 614 STVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDL 673

Query: 576 FCQMVEK 582
             +M++K
Sbjct: 674 RKEMLQK 680



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 234/485 (48%), Gaps = 35/485 (7%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N ++ ++VI G+ +  R  DA+    E   +   P+ ++ N ++  + K G  E    
Sbjct: 193 PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFS 252

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M+ +GL P+A +YN+L+ GLC AG M E     ++M    + PD  TYSIL  G  
Sbjct: 253 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 312

Query: 180 -------LLS----------------------------QISGAWKVIQKLLIKGSDPDIV 204
                  +LS                            ++S A +V+Q L+  G  P  V
Sbjct: 313 RNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 372

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            Y  LI GYCQ G +E        M S+  K + I Y+ L++ +CK+ RI  A  LL EM
Sbjct: 373 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 432

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           +  G+ P + T++ LI    +  ++ K   + +EM    + PN  ++G+I+   C+   I
Sbjct: 433 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 492

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            EA    D +   + + +  +YN +ID YV+ G   +A  L  ++    ISPSIVT+N L
Sbjct: 493 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 552

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G C   ++++A  +++++  H L P AV+Y T ++A C  GNI + L L Q M    I
Sbjct: 553 IKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 612

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
             T  TY  +I GL    +L E   L + M    V P    +N ++ ++ K  +  KA  
Sbjct: 613 KSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 672

Query: 505 LLNQM 509
           L  +M
Sbjct: 673 LRKEM 677



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 218/473 (46%), Gaps = 38/473 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL-YNLRHTDIM--WDLYDDIKVSETPRNVY 64
           R G   DAV V  +M E  +  +  TYN+++  +++  D+   + L D +       N  
Sbjct: 208 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAI 267

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGP-------------------SVVSL---- 101
           T ++++ GLC+  R+ +    L E A ++  P                   +++SL    
Sbjct: 268 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKS 327

Query: 102 ------------NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                       + +++  CK G   +A+ +   ++  GL P    YN LI+G C  G +
Sbjct: 328 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 387

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           E A      M    ++PD ITY+ L  G     +I+ A  ++ ++   G +P + T+  L
Sbjct: 388 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 447

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I  Y + G +E+   +   M   G K NV++Y  ++++ CK+G+I EA+ +L +M    +
Sbjct: 448 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 507

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P+   Y+ +I    +     +A  L  +M S  ISP+   +  ++ GLC +  I+EA  
Sbjct: 508 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 567

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             +SL     I D V YN +I      GNI +A+ L +++ +  I  ++ T++ LI G  
Sbjct: 568 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLG 627

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
             G++ +   L   +  + + PS   +   + AY + GN  +   L +EM  K
Sbjct: 628 GAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 171/345 (49%), Gaps = 35/345 (10%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           YT SI+++GLC+  ++  A   LQ        P+ V  N +++ YC+ G  E A   F  
Sbjct: 337 YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 396

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M    + PD  +YN LI+GLC A  +  A +   +M  +GV P   T++ L   +    Q
Sbjct: 397 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 456

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +   + V+ ++   G  P++V+Y  ++  +C+ G + E + + + M  +    N   Y+ 
Sbjct: 457 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 516

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ +  + G  D+A  L+ +M++ G+ P +VTY++LI+GLC Q ++ +A ++ N + + R
Sbjct: 517 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 576

Query: 304 ISPNSFAHGAILLGLCEKEMITEA-----RMY---------------------------- 330
           + P++ ++  ++   C +  I +A     RM+                            
Sbjct: 577 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEME 636

Query: 331 --FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
             +  ++ +N +    ++NIM++ Y K GN  +A  L +++++KR
Sbjct: 637 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 681



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 153/334 (45%), Gaps = 16/334 (4%)

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL-IEKRISPSIVTFNS 383
            + R  F  L  +    D   +N  +   V  G++GEAV + R++  +    P+  ++N 
Sbjct: 142 ADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNV 201

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           +I G  + G+  DA  + D +    + P+ +TY T ++ + + G+++   +L  +M    
Sbjct: 202 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHG 261

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           + P  +TY V++ GLC+  ++ E   LL++M    + PD  TY+ +     +  D +   
Sbjct: 262 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 321

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L  +   + +     T +IL++GLC +G +  A+ +L SL    +  T+V Y T+I  +
Sbjct: 322 SLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 381

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQ 608
           C  G++  A + F QM  +  +     Y                +     M  NG  P  
Sbjct: 382 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 441

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           E    ++ A+ + G L   F + + M ++GL P+
Sbjct: 442 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 475



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 140/305 (45%), Gaps = 11/305 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSE 58
           Y +TG +  A     +MK   +K    TYN+L+  L          D++ ++ D+  V+ 
Sbjct: 381 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN-GVNP 439

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           T   V T + +ID   +  +L+   + L E       P+VVS  +I++ +CK G    A 
Sbjct: 440 T---VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 496

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +   M    + P+A  YN +I      G  ++A      M  +G+ P  +TY++L KG 
Sbjct: 497 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 556

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
              SQIS A ++I  L      PD V+Y  LI   C  GN+++ L L++ M   G K  V
Sbjct: 557 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTV 616

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y  L+S +  +GR+ E   L  +M    + P    ++I++    K     KA  L  E
Sbjct: 617 RTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKE 676

Query: 299 MCSKR 303
           M  KR
Sbjct: 677 MLQKR 681



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 123/290 (42%), Gaps = 20/290 (6%)

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           PS+ + N L+      G+ AD RR    +   G  P    +   + A    G++   + +
Sbjct: 123 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 182

Query: 436 LQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L+ M    A  P   +Y VVI G+ +  +  +AV++ ++M    V P+ ITYNT+I    
Sbjct: 183 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 242

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K  DL   F L +QM  H L+P + TYN+L+ GLC  G +     LL  +    +     
Sbjct: 243 KGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 302

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC----------------- 597
            Y+ +       GD    ++ F + ++ G  ++I DYT S                    
Sbjct: 303 TYSILFDGLSRNGDSKAMLSLFGKSLKNG--VTIGDYTCSILLNGLCKDGKVSIAEEVLQ 360

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            +++ G  P + I   ++  + Q G+L   F     M    + PD    N
Sbjct: 361 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 410


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 158/538 (29%), Positives = 278/538 (51%), Gaps = 16/538 (2%)

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE-PDAITYSILAK 176
           +G F L++     PD F++N  +    +AG ++EA+     MG  G   P+A +Y+++  
Sbjct: 137 RGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIA 196

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G         A K+  ++  K   P+ +TY  +I G+ + G++E G +L   ML  G K 
Sbjct: 197 GLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKP 256

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NVI Y+VLLS +C++GR+ E   +L EM +  + PD  TYSIL  G  +       + L+
Sbjct: 257 NVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLF 316

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            E   K +   ++    +L GLC+   I++A     +L+ S  +Q  V+YN +I+GY ++
Sbjct: 317 EESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQI 376

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G++  A  +++Q+  + I P  +T+N+LI G  K  ++ +A  L+  ++ +G+ PS  T+
Sbjct: 377 GDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETF 436

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T ++AY   G +++   +L +M+ K + P  V+Y  ++   CK  K+ EAV +L+DM++
Sbjct: 437 NTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFI 496

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             V P    YN II ++ +C    +AF L  +M    + P+  TYN+LI GLC    +  
Sbjct: 497 KDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISE 556

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---- 592
           A+ LL SL+ + ++   ++Y T+I A C   +  +A+    +M + G + S R Y     
Sbjct: 557 AEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFS 616

Query: 593 -----------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                      ++ +  ML     P   I  +M+ A+ + G+   V  L   M   G+
Sbjct: 617 SLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI 674



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 153/557 (27%), Positives = 277/557 (49%), Gaps = 4/557 (0%)

Query: 42  RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA-GKEFGPSVVS 100
           RH D+       +     P + +T +  +        L +A+  L+         P+  S
Sbjct: 132 RHADVRGAFELLVAARARP-DTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
            N +++   K G    A  LF  M +  + P+  +YN +I G    G +E      + M 
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
           RHG++P+ ITY++L  G     ++     V+ ++  +   PD  TY++L  G+ + G+ +
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
             L L E  + +G K+     S+LL+ +CK G+I +A  +L  +   GL    V Y+ LI
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLI 370

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
            G C+   +  A  ++ +M S+ I P+   + A++ GL + E ITEA      +  +   
Sbjct: 371 NGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVN 430

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
             V  +N +ID Y + G + +   +   + EK + P++V++ S++  FCKNGK+ +A  +
Sbjct: 431 PSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAI 490

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           LD + +  + P A  Y   ++AY E G+  +   L ++M++  + P+ VTY ++IKGLCK
Sbjct: 491 LDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCK 550

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
           Q ++ EA +LL+ +   G+ PD I+YNT+I + C   +  +A +L  +MW   ++P+  T
Sbjct: 551 QSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRT 610

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y +L   L   G +   + L   + + ++      Y  ++ A+   G+  K      +M 
Sbjct: 611 YRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMS 670

Query: 581 EKGFEISIRDYTKSFFC 597
           +KG  I++ DYT    C
Sbjct: 671 DKG--IAVGDYTSMTNC 685



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 219/462 (47%), Gaps = 24/462 (5%)

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL-NVIA 240
           + + GA+++   L+   + PD  T+   +      G+++E + +   M   G    N  +
Sbjct: 134 ADVRGAFEL---LVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+V+++ + K+G   +A+ L  EM    + P+ +TY+ +I G  K+  +    +L+++M 
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
              + PN   +  +L GLC    + E     D +     + D   Y+I+ DG+ + G+  
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
             + L+ + ++K +     T + L+ G CK+GK++ A  +L T+   GL  + V Y T +
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLI 370

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YC+ G+++   ++ Q+M+++ I P H+TY  +I GL K  ++ EA  L+ +M   GV 
Sbjct: 371 NGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVN 430

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P   T+NT+I ++ +   L K F +L+ M    L+P   +Y  +++  C NG +  A  +
Sbjct: 431 PSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAI 490

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
           L  +   ++      Y  II A+   G   +A      + EK                M 
Sbjct: 491 LDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAF----MLAEK----------------MK 530

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           S+G PP      +++    +   +    EL   +   GL PD
Sbjct: 531 SSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPD 572



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 3/303 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYD---DIKVSETPRN 62
           Y + G +  A  +  +MK   ++    TYN+L+  L   + + + +D   +++ +    +
Sbjct: 373 YCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPS 432

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +ID   +  +L+   + L +   K   P+VVS  +I++ +CK G    A  +  
Sbjct: 433 VETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILD 492

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M    + P A  YN +I      GS ++A      M   GV P  +TY++L KG    S
Sbjct: 493 DMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQS 552

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           QIS A +++  L   G  PD+++Y  LI   C   N +  L+L + M   G K +   Y 
Sbjct: 553 QISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYR 612

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L SS+  +GR+ E   L  +M    + P    Y+I++    K  +  K   L  EM  K
Sbjct: 613 MLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDK 672

Query: 303 RIS 305
            I+
Sbjct: 673 GIA 675



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 112/257 (43%), Gaps = 21/257 (8%)

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK-AIGPTHVT 450
           G+ AD R   + +      P   T+   + A    G++   + +L+ M    A  P   +
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y VVI GL K     +AV+L ++M    V P+ ITYNT+I    K  DL   F+L +QM 
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
            H L+P   TYN+L+ GLC  G +     +L  +    +      Y+ +   H   GD  
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
             ++ F + V+KG +I       ++ C +L NG   D              G +    E+
Sbjct: 311 TMLSLFEESVKKGVKIG------AYTCSILLNGLCKD--------------GKISKAEEV 350

Query: 631 AAVMIKSGLLPDKFLIN 647
              ++ SGLL    + N
Sbjct: 351 LQTLVNSGLLQTTVIYN 367


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 174/646 (26%), Positives = 305/646 (47%), Gaps = 49/646 (7%)

Query: 5   VYSRTGMVHDAV----FVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDI----KV 56
            YS +G+V  A+    FV+         ++  +  ++L  L   +I   LYD++      
Sbjct: 138 AYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGA 197

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
            +   + Y+  I++ GLC++ +L++    +++  G+   P+++  N ++  YCK G  E+
Sbjct: 198 GDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEM 257

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A GLF  +   G  P   +Y  +I+G C  G  +       +M   G+  +   Y+ +  
Sbjct: 258 ANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIID 317

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
             +    I  A + I+ ++  G  PDIVTY  LI G C+ G V E  +L E  L +G   
Sbjct: 318 ARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMP 377

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N  +Y+ L+ + CK G  D A   L EM   G KPDLVTY  L+ GL    +V  A+ + 
Sbjct: 378 NKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIR 437

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M  + + P++  +  ++ GLC+K  +  A++    ++  + + D  +Y  ++DG+++ 
Sbjct: 438 EKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRN 497

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           GN+ EA +L+   IEK ++P IV +N++I G+CK G + DA   ++ +K   L P   TY
Sbjct: 498 GNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTY 557

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           +T ++ Y ++ ++     + +EM      P  VTYT +I G C++  L  ++++  +M  
Sbjct: 558 STVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQA 617

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+ P+ +TY+ +I SFCK   L  A     +M ++   P   T+N L++G   NG    
Sbjct: 618 CGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNG---- 673

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFF 596
                               T  I     E   +K   F                  +FF
Sbjct: 674 --------------------TRAISEKGNEFQENKQSMFL-----------------NFF 696

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             M+S+G+ P       +LI   Q G   +  +L+  M   G +PD
Sbjct: 697 GRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPD 742



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 150/586 (25%), Positives = 261/586 (44%), Gaps = 56/586 (9%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N +  S ++  L +     +  + L+    +E  P+  +++ ++  Y   G  E A  
Sbjct: 91  PINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALE 150

Query: 120 LFCLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
           L+  +LK Y   PD  + N L++ L   G +E A +  ++M                   
Sbjct: 151 LYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEM------------------- 191

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYT--VLICGYCQIGNVEEGLKLREVMLSQGFKL 236
               +I GA            D  +  Y+  +++ G C+ G +EEG KL E    QG   
Sbjct: 192 ---LEIDGA-----------GDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIP 237

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N+I Y+ L+   CK G ++ A GL  E++  G  P + TY  +I G CK+       +L 
Sbjct: 238 NIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLL 297

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM S+ ++ N   +  I+    +   I +A    + +I   C  D+V YN +I G  + 
Sbjct: 298 MEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRD 357

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G + EA QL  Q + K + P+  ++  LI+ +CK G    A   L  +   G +P  VTY
Sbjct: 358 GKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTY 417

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              ++     G +   L + ++M  + + P    Y +++ GLCK++KL  A  LL +M  
Sbjct: 418 GALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLD 477

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             V PD   Y T++  F +  +L +A +L        + P    YN +I G C  G +K+
Sbjct: 478 QSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKD 537

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFF 596
           A   +  +++ +++  +  Y+T+I  +  + D+  A   F +MV+   + ++  YT    
Sbjct: 538 AMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTS--- 594

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              L NGF      C        + GDL    ++   M   GL+P+
Sbjct: 595 ---LINGF------C--------RKGDLHRSLKIFREMQACGLVPN 623



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 196/443 (44%), Gaps = 37/443 (8%)

Query: 215 QIGNVEEGLKLREVMLSQG---FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           +I +VE GLK  +  +S+G     +N  AYS LL  + +S    E   +L  M    + P
Sbjct: 69  RIRDVELGLKFFD-WVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSP 127

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS-PNSFAHGAILLGLCEKEMITEARMY 330
                SI+I+       V KA++LY  +       P+  A  ++L  L +   I  AR  
Sbjct: 128 TREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKL 187

Query: 331 FDSLIMSNCIQDVVLYN----IMIDGYVKLGNIGEAVQLYRQLIEKRIS----PSIVTFN 382
           +D ++  +   D  + N    IM+ G  K G + E     R+LIE R      P+I+ +N
Sbjct: 188 YDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEG----RKLIEDRWGQGCIPNIIFYN 243

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           +LI G+CK G +  A  L   +KL G  P+  TY   +N +C++G+ + +  LL EM ++
Sbjct: 244 TLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSR 303

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            +      Y  +I    K   + +AV+ +E M   G  PD +TYNT+I   C+   + +A
Sbjct: 304 GLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEA 363

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            QLL Q     L P   +Y  LI   C  G    A   L+ + E       V Y  ++  
Sbjct: 364 DQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHG 423

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
               G+V  A+T   +M+E+G                      PD  I  +++    +  
Sbjct: 424 LVVAGEVDVALTIREKMLERGVF--------------------PDAGIYNILMSGLCKKF 463

Query: 623 DLGSVFELAAVMIKSGLLPDKFL 645
            L +   L A M+   +LPD F+
Sbjct: 464 KLPAAKLLLAEMLDQSVLPDAFV 486



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 113/234 (48%), Gaps = 14/234 (5%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I G C+   ++DA+  +     +   P   + + ++  Y K    + A+ +F  M+K  
Sbjct: 525 MIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMK 584

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P+  +Y  LI+G C  G +  +L+   +M   G+ P+ +TYSIL   F   +++  A 
Sbjct: 585 CKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAA 644

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGN---VEEGLKLRE-----------VMLSQGF 234
              +++L+    P+ VT+  L+ G+ + G     E+G + +E            M+S G+
Sbjct: 645 SFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGW 704

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
                AY+ +L  +C+ G    AL L  +M + G  PD V++  L+ G+C + +
Sbjct: 705 APRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGR 758



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 52/183 (28%)

Query: 21  KMKELDLKVSIQTYNSLLYNL-RHTDIMWDL--YDDIKVSETPRNVYTNSIVIDGLCQQS 77
           +M ++  K ++ TY SL+    R  D+   L  + +++      NV T SI+I   C+++
Sbjct: 579 EMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEA 638

Query: 78  RLQDAILFLQE-----------------------------TAGKEF-------------- 94
           +L DA  F +E                               G EF              
Sbjct: 639 KLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGR 698

Query: 95  ------GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
                  P   + N+I+   C+ G    A  L   M   G  PD+ S+  L+HG+C+ G 
Sbjct: 699 MISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGR 758

Query: 149 MEE 151
            +E
Sbjct: 759 SKE 761


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  281 bits (720), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 155/493 (31%), Positives = 263/493 (53%), Gaps = 3/493 (0%)

Query: 96  PSVVSLNAIMSRYCKLG--FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           PS+ + NA++S   +      + +  +F  +++  LHP+ +++N+L+H  C  G++ +AL
Sbjct: 169 PSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADAL 228

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
              + M   G+ PDA+TY+ L         +  A  ++ ++   G  P   TY  L+  +
Sbjct: 229 ATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAF 288

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK-PD 272
            ++G +++  K+ E M + GF+ ++  Y+VL   +C++G++DEA  L  EME +    PD
Sbjct: 289 ARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPD 348

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY+ L+    K      A++L  EM  K + P    H  ++  LC++  + EA    +
Sbjct: 349 VVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLE 408

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +       DV+ YN +ID Y K GN+ +A  L  +++ K +     T N+++Y  CK  
Sbjct: 409 KIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMK 468

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           +  DA  LL +    G  P  V+Y T M AY +E N +  L L  +M  + + P+  TY 
Sbjct: 469 RYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYN 528

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +IKGLC+  +L+EA+  L ++   G+ PD+ TYN II ++CK  DL  AF+  N+M  +
Sbjct: 529 TLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVEN 588

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
           + +P   T N L++GLC++G L  A  L  S  E    +  + Y T+I++ C  GDV  A
Sbjct: 589 SFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTA 648

Query: 573 MTFFCQMVEKGFE 585
           + FF  M  KG +
Sbjct: 649 LHFFDDMEVKGLQ 661



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 161/572 (28%), Positives = 285/572 (49%), Gaps = 7/572 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELD-LKVSIQTYNSLLYNLRHT-----DIMWDLYDDIKVSE 58
            Y+R  + H A  ++  ++    ++ S+Q  N++L  L  +         D++  +    
Sbjct: 144 AYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELR 203

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              N YT ++++   C +  L DA+  L    G    P  V+ N +++ +C+ G    A+
Sbjct: 204 LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 263

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M + G+ P   +YN L+      G +++A +    M  +G EPD  TY++LA G 
Sbjct: 264 ALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGL 323

Query: 179 HLLSQISGAWKVIQKL-LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
               ++  A+++  ++  +  + PD+VTY  L+    +     + L+L E M  +G K  
Sbjct: 324 CQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPT 383

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           ++ +++++ S+CK G+++EALG L ++   GL PD++TY+ LI   CK   V KA  L +
Sbjct: 384 LVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMD 443

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  K +  ++F    +L  LC+ +   +A     S      + D V Y  ++  Y K  
Sbjct: 444 EMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEY 503

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N   A++L+ Q+IE+++ PSI T+N+LI G C+  ++ +A   L+ +   GL P   TY 
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYN 563

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++AYC+EG+++       +M   +  P  VT   ++ GLC   KL +A++L E     
Sbjct: 564 IIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEK 623

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G   D ITYNT+I+S CK  D+  A    + M +  L+P + TYN+++  L   G  + A
Sbjct: 624 GKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA 683

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
             +L  L +        A   +  +   E DV
Sbjct: 684 HNMLHKLADSGKLSQSFACPLLKPSSADEADV 715



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 146/598 (24%), Positives = 265/598 (44%), Gaps = 69/598 (11%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           +L   +   G + DA+  ++ M+   L     TYN+LL                      
Sbjct: 213 LLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLL---------------------- 250

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
                     +  C++  L +A   L         P+  + N ++S + +LG+ + A  +
Sbjct: 251 ----------NAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKV 300

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE-PDAITYSILAKGFH 179
              M  YG  PD  +YN+L  GLC AG ++EA    ++M R     PD +TY+ L     
Sbjct: 301 VESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACF 360

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
                S A ++++++  KG  P +VT+ +++   C+ G +EE L   E +  +G   +VI
Sbjct: 361 KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI 420

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L+ + CK+G + +A  L+ EM   GLK D  T + ++  LCK  +   A +L +  
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP 480

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             +   P+  ++G ++    ++     A   +D +I    I  +  YN +I G  ++  +
Sbjct: 481 PQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERL 540

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA+    +L+EK + P   T+N +I+ +CK G + +A R  + +  +  +P  VT  T 
Sbjct: 541 KEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           MN  C  G + + L L +    K      +TY  +I+ +CK   +  A+   +DM V G+
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN----------LEPTSA---------- 519
            PD  TYN ++ +  +     +A  +L+++              L+P+SA          
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEG 720

Query: 520 ----------------TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
                           TY   ++GLC  G LK A  +L  + +  + +    Y T+++
Sbjct: 721 KPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLME 778



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 225/483 (46%), Gaps = 27/483 (5%)

Query: 161 RHGVEPD----AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           R GV P         S L++    L Q S    V + L+     P+  T+ +L+  +C  
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQAS--LDVFRSLIELRLHPNHYTFNLLVHTHCSK 221

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G + + L     M   G   + + Y+ LL++ C+ G + EA  LL  M+  G+ P   TY
Sbjct: 222 GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTY 281

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA-RMYFDSLI 335
           + L+    +   + +A ++   M +    P+   +  + +GLC+   + EA R+  +   
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMER 341

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
           +S  + DVV YN ++D   K     +A++L  ++ +K + P++VT N ++   CK GK+ 
Sbjct: 342 LSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLE 401

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A   L+ I   GL P  +TY T ++AYC+ GN+ +   L+ EM  K +     T   V+
Sbjct: 402 EALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVL 461

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             LCK  + ++A +LL      G  PD+++Y T++ ++ K  +   A +L +QM    L 
Sbjct: 462 YNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLI 521

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P+ +TYN LI GLC    LK A   L  L E  +   +  Y  II A+C EGD+  A  F
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRF 581

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
             +MVE                    N F PD   C  ++      G L    +L    +
Sbjct: 582 HNKMVE--------------------NSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWV 621

Query: 636 KSG 638
           + G
Sbjct: 622 EKG 624



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 139/604 (23%), Positives = 252/604 (41%), Gaps = 112/604 (18%)

Query: 3   AFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSE---- 58
           A   S + +   ++ V   + EL L  +  T+N L++       + D    +   +    
Sbjct: 180 ALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGL 239

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           +P  V  N++ ++  C++  L +A   L         P+  + N ++S + +LG+ + A 
Sbjct: 240 SPDAVTYNTL-LNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQAT 298

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR----------------- 161
            +   M  YG  PD  +YN+L  GLC AG ++EA    ++M R                 
Sbjct: 299 KVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDA 358

Query: 162 -------------------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
                               GV+P  +T++I+ K      ++  A   ++K+  +G  PD
Sbjct: 359 CFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPD 418

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           ++TY  LI  YC+ GNV +   L + M+ +G K++    + +L ++CK  R ++A  LL+
Sbjct: 419 VITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLH 478

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
                G  PD V+Y  ++    K+     A++L+++M  +++ P+   +  ++ GLC  E
Sbjct: 479 SPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRME 538

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            + EA    + L+    + D   YNI+I  Y K G++  A + + +++E    P +VT N
Sbjct: 539 RLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCN 598

Query: 383 SLIYGFCKNGKVADARRLL-----------------------------------DTIKLH 407
           +L+ G C +GK+  A +L                                    D +++ 
Sbjct: 599 TLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVK 658

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQ------------------------------ 437
           GL+P A TY   ++A  E G  +    +L                               
Sbjct: 659 GLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEH 718

Query: 438 ------EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
                 E   KA      TY   + GLC   +L+EA  +L++M   G+  D  TY T++ 
Sbjct: 719 EGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLME 778

Query: 492 SFCK 495
              K
Sbjct: 779 GLIK 782



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 214/436 (49%), Gaps = 18/436 (4%)

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRI--DEALGLLYEMEAVGLKPDLVTYSILIRG 282
           L  +   +G + ++ A + +LS++ +S       +L +   +  + L P+  T+++L+  
Sbjct: 158 LHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHT 217

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
            C +  +  A+   + M    +SP++  +  +L   C K M+ EAR     +        
Sbjct: 218 HCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPT 277

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
              YN ++  + +LG I +A ++   +      P + T+N L  G C+ GKV +A RL D
Sbjct: 278 QPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKD 337

Query: 403 TI-KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
            + +L    P  VTY T ++A  +       L LL+EM  K + PT VT+ +V+K LCK+
Sbjct: 338 EMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKE 397

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            KL+EA+  LE +   G+ PD ITYNT+I ++CK  ++ KAF L+++M    L+  + T 
Sbjct: 398 GKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTL 457

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N ++  LC     ++A+ LL S  +      +V+Y T++ A+  E +   A+  + QM+E
Sbjct: 458 NTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIE 517

Query: 582 KGFEISIRDYTK--SFFCMM-------------LSNGFPPDQEICEVMLIAFHQGGDLGS 626
           +    SI  Y       C M             +  G  PD+    +++ A+ + GDL +
Sbjct: 518 RKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLEN 577

Query: 627 VFELAAVMIKSGLLPD 642
            F     M+++   PD
Sbjct: 578 AFRFHNKMVENSFKPD 593



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 123/294 (41%), Gaps = 41/294 (13%)

Query: 39  YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSV 98
           YN      +WD   + K+  +   + T + +I GLC+  RL++AI  L E   K   P  
Sbjct: 503 YNPEPALRLWDQMIERKLIPS---ISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDE 559

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
            + N I+  YCK G  E A      M++    PD  + N L++GLC+ G +++AL+    
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFES 619

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
               G + D ITY+ L +    +  +  A      + +KG  PD  TY V++    + G 
Sbjct: 620 WVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGR 679

Query: 219 VEEGLKLREVM-----LSQGFKLNVI-------------------------------AYS 242
            EE   +   +     LSQ F   ++                                Y 
Sbjct: 680 SEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYM 739

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK--VHKAIQ 294
             L+ +C  G++ EA  +L EM   G+  D  TY  L+ GL K+ K   H A Q
Sbjct: 740 ERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKRQTHAAGQ 793


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  281 bits (718), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 167/552 (30%), Positives = 273/552 (49%), Gaps = 23/552 (4%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGL--FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           PS+ + NA++S   +         L  F  ++   LHP+ +++N+L+H  C  G++ +AL
Sbjct: 165 PSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADAL 224

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
              + M   G+ PDA+TY+ L         +  A  ++ ++   G  P   TY  L+  Y
Sbjct: 225 STLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAY 284

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG-LKPD 272
            ++G +++  K+ E M + GF+ ++  Y+VL + +C++G++DEA  L  EME +G L PD
Sbjct: 285 ARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPD 344

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY+ L     K      A++L  EM  K +      H  ++ GLC+   +  A    +
Sbjct: 345 VVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLN 404

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +       DV+ YN +I  + K GNI +A  L  +++ + +     T N+++Y  CK  
Sbjct: 405 KMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEK 464

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           +  +A+ LL +    G  P  V+Y T M AY +E N +  L L  EM  K + P+  TY 
Sbjct: 465 RYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYN 524

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +IKGL +  +L+EA+  L ++   G+ PD  TYN II ++CK  DL  AFQ  N+M  +
Sbjct: 525 TLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVEN 584

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
           + +P   T N L++GLC+NG L  A  L  S  E    +  + Y T+I+  C +GDV  A
Sbjct: 585 SFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTA 644

Query: 573 MTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
           + FF  M  +G +                    PD     V+L A  + G       +  
Sbjct: 645 LHFFADMEARGLQ--------------------PDAFTYNVVLSALSEAGRTEEAQNMLH 684

Query: 633 VMIKSGLLPDKF 644
            + +SG L   F
Sbjct: 685 KLAESGTLSQSF 696



 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 172/620 (27%), Positives = 301/620 (48%), Gaps = 11/620 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKE-LDLKVSIQTYNSLLYNLRHT-----DIMWDLYDDIKVSE 58
            YSR  + H A  ++  ++  + ++ S+Q  N++L  L  +         D +  I    
Sbjct: 140 AYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALR 199

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              N YT ++++   C +  L DA+  L    G    P  V+ N +++ +C+ G    A+
Sbjct: 200 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 259

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M K G+ P   +YN L+      G +++A +    M  +G EPD  TY++LA G 
Sbjct: 260 ALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGL 319

Query: 179 HLLSQISGAWKVIQKLLIKGS-DPDIVTYTVL--ICGYCQIGNVEEGLKLREVMLSQGFK 235
               ++  A+++  ++   G+  PD+VTY  L   C  C+  +  + L+L E M  +G K
Sbjct: 320 CQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSS--DALRLLEEMREKGVK 377

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
             ++ +++++  +CK G ++ ALG L +M   GL PD++TY+ LI   CK   + KA  L
Sbjct: 378 ATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTL 437

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
            +EM  + +  ++F    +L  LC+++   EA+    S      + D V Y  ++  Y K
Sbjct: 438 MDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFK 497

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
             N   A++L+ ++IEK+++PSI T+N+LI G  + G++ +A   L+ +   GL P   T
Sbjct: 498 EYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTT 557

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y   ++AYC+EG+++       +M   +  P  VT   ++ GLC   KL +A++L E   
Sbjct: 558 YNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWV 617

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G   D ITYNT+I++ CK  D+  A      M    L+P + TYN+++  L   G  +
Sbjct: 618 EKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTE 677

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF 595
            A  +L  L E        +   +  +   E +  K      + VE   + +   YTK  
Sbjct: 678 EAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLV 737

Query: 596 FCMMLSNGFPPDQEICEVML 615
             +  S  F   + I + M+
Sbjct: 738 NGLCTSGQFKEAKAILDEMM 757



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 250/536 (46%), Gaps = 36/536 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +  T + +++  C++  L +A   L         P+  + N ++S Y +LG+ + A  + 
Sbjct: 238 DAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVV 297

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG-VEPDAITYSILA----- 175
             M   G  PD ++YN+L  GLC AG ++EA    ++M R G + PD +TY+ LA     
Sbjct: 298 EAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFK 357

Query: 176 ------------------------------KGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
                                         KG     ++ GA   + K+   G  PD++T
Sbjct: 358 CRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVIT 417

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y  LI  +C+ GN+ +   L + M+ +G KL+    + +L ++CK  R +EA GLL    
Sbjct: 418 YNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPP 477

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G  PD V+Y  ++    K+     A++L++EM  K+++P+   +  ++ GL     + 
Sbjct: 478 QRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLK 537

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA    + L+    + D   YNI+I  Y K G++  A Q + +++E    P +VT N+L+
Sbjct: 538 EAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLM 597

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G C NGK+  A +L ++    G +   +TY T +   C++G++   L    +ME + + 
Sbjct: 598 NGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQ 657

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P   TY VV+  L +  + +EA  +L  +   G      +   +  S     +  K  + 
Sbjct: 658 PDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKT 717

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
             +   +  +  S  Y  L++GLC +G  K A  +L  + +  +S+    Y T+++
Sbjct: 718 EEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLME 773



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 217/463 (46%), Gaps = 16/463 (3%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P+  T+ +L+  +C  G + + L     M   G   + + Y+ LL++ C+ G + EA  L
Sbjct: 202 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L  M+  G+ P   TY+ L+    +   + +A ++   M +    P+ + +  +  GLC+
Sbjct: 262 LARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ 321

Query: 321 KEMITEA-RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
              + EA R+  +   +   + DVV YN + D   K     +A++L  ++ EK +  ++V
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLV 381

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T N +I G CK+G++  A   L+ +   GL P  +TY T ++A+C+ GNI +   L+ EM
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
             + +     T   V+  LCK+ + +EA  LL+     G  PD+++Y T++ ++ K  + 
Sbjct: 442 VRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNS 501

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
             A +L ++M    L P+ +TYN LI GL   G LK A   L  L E  +      Y  I
Sbjct: 502 EPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNII 561

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISI---------------RDYTKSFFCMMLSNGF 604
           I A+C EGD+  A  F  +MVE  F+  +                D     F   +  G 
Sbjct: 562 IHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGK 621

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             D      ++    + GD+ +     A M   GL PD F  N
Sbjct: 622 KVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYN 664



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 124/274 (45%), Gaps = 9/274 (3%)

Query: 21  KMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSE------TPRNVYTNSIVIDGLC 74
           +M E  L  SI TYN+L+  L     + +  D  K++E       P +   N I+I   C
Sbjct: 510 EMIEKKLTPSISTYNTLIKGLSRMGRLKEAID--KLNELMEKGLVPDDTTYN-IIIHAYC 566

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           ++  L++A  F  +     F P VV+ N +M+  C  G  + A  LF   ++ G   D  
Sbjct: 567 KEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVI 626

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +YN LI  +C  G ++ AL F  DM   G++PDA TY+++        +   A  ++ KL
Sbjct: 627 TYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKL 686

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
              G+     +  +L           +  K  E  +         AY+ L++ +C SG+ 
Sbjct: 687 AESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQF 746

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
            EA  +L EM   G+  D  TY  L+ GL K+ K
Sbjct: 747 KEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQK 780


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 172/628 (27%), Positives = 314/628 (50%), Gaps = 4/628 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           Y R G V +AV V  +M   D + S+Q+YN++   L    +      +Y  +K      +
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPD 145

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT++I +   C   R   A+  L    G+    + VS  A++S + K      A  LF 
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFD 205

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            MLK G+ PD  ++N LIH LC  G+++E+ +  + + + GV P+  T++I  +G     
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            I  A ++++ ++ +G  PD+++Y  LICG+C+   + E       M++ G + N   Y+
Sbjct: 266 AIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYN 325

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +++  CK+G +  A  +L +    G  PD  TYS LI GLC    +++A+ ++ E   K
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
               +   +  ++ GL ++ ++ +A      ++   C  D+  YN++++G  K+G + +A
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +    I K   P I TFN+LI G+CK   +  A  +LDT+  HG+ P  +TY T +N 
Sbjct: 446 NGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNG 505

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+   +  ++   + M  K   P  +TY ++I+  CK  K+ EA++L ++M   G+TPD
Sbjct: 506 LCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWL-HNLEPTSATYNILIDGLCVNGDLKNADCLL 541
            +T  T+I   C   +L KA++L   +   +    ++A +NI+I+  C   ++  A+ L 
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLF 625

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
             +   + +     Y  +I ++C  G++  A TF  + + KG   S     K   C+ ++
Sbjct: 626 HKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVT 685

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFE 629
           +       I  +M+       ++ S+FE
Sbjct: 686 HRLSEAVVIINLMVQNGIVPEEVNSIFE 713



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 164/588 (27%), Positives = 285/588 (48%), Gaps = 26/588 (4%)

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           ++ ++Q+A+   +     +  PSV S NAIM+   + G+   A  ++  M   G++PD +
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVY 147

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           ++ I +   CI G    AL   N+M   G E +A++Y  +  GF+  +    A+ +  ++
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEM 207

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           L +G  PDI+T+  LI   C+ GNV+E  KL   ++ +G   N+  +++ +  +C+ G I
Sbjct: 208 LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAI 267

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           DEA  LL  + + GL PD+++Y+ LI G CK  K+ +A    ++M +  + PN F +  I
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G C+  M+  A       +    I D   Y+ +I+G    G++  A+ ++ + +EK  
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
             SI+ +N+L+ G  K G V  A +L+  +  HG  P   TY   +N  C+ G +     
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +L +   K   P   T+  +I G CKQ  + +A+++L+ M   G+TPD ITYNT++   C
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K + L         M      P   TYNILI+  C +  +  A  L   ++   ++   V
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF---------- 604
              T+I   C+ G++ KA   F   +EK ++ S   Y+ + F +M+ N F          
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVT-IEKEYKFS---YSTAIFNIMI-NAFCXKLNVSMAE 622

Query: 605 -----------PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                       PD     VM+ ++ + G++          I  GL+P
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP 670



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 251/505 (49%), Gaps = 9/505 (1%)

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
            IM  Y + G  + A  +F  M  Y   P   SYN +++ L   G   +A +    M   
Sbjct: 81  GIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI 140

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY----CQIGN 218
           G+ PD  T++I  K F +  + + A +++  +  +G + + V+Y  +I G+    CQI  
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQI-- 198

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
             E   L + ML QG   +++ ++ L+  +CK G + E+  L  ++   G+ P+L T++I
Sbjct: 199 --EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
            I+GLC++  + +A +L   + S+ ++P+  ++  ++ G C+   + EA  Y   ++ S 
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG 316

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              +   YN +I+G+ K G +  A ++ R  + K   P   T++SLI G C +G +  A 
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            +       G + S + Y T +    ++G + + L L+++M      P   TY +V+ GL
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK   L +A  +L D    G  PD  T+NT+I  +CK +++ KA ++L+ M  H + P  
Sbjct: 437 CKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TYN L++GLC    L N      ++ E   +   + Y  +I++ C +  V +AM  F +
Sbjct: 497 ITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKE 556

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNG 603
           M  +G    I     +  C + SNG
Sbjct: 557 MKTRGLTPDIVTLC-TLICGLCSNG 580



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/539 (23%), Positives = 235/539 (43%), Gaps = 57/539 (10%)

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV--TYTVLICGY 213
           T D  +H +E    TY  + +   L  +      V+ ++  K  D  ++   Y  ++  Y
Sbjct: 32  TEDGFKHTLE----TYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLEGVYIGIMRDY 86

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
            + G V+E + + E M     + +V +Y+ +++ + + G   +A  +   M+ +G+ PD+
Sbjct: 87  GRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDV 146

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            T++I ++  C   +   A++L N M  +    N+ ++ A++ G  ++    EA   FD 
Sbjct: 147 YTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDE 206

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++      D++ +N +I    K GN+ E+ +L+ +++++ + P++ TFN  I G C+ G 
Sbjct: 207 MLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + +A RLL++I   GL P  ++Y T +  +C+   +      L +M    + P   TY  
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK------------ 501
           +I G CK   +Q A ++L D    G  PD+ TY+++I   C   D+ +            
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386

Query: 502 -----------------------AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
                                  A QL+  M  H   P   TYN++++GLC  G L +A+
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK----- 593
            +L              + T+I  +C + ++ KA+     M+  G    +  Y       
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506

Query: 594 ----------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                       F  ML  G  P+     +++ +F +   +    EL   M   GL PD
Sbjct: 507 CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 147/486 (30%), Positives = 260/486 (53%), Gaps = 2/486 (0%)

Query: 100 SLNAIMSRYCK-LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
           +LN ++  YCK L F EV   +   M K  + PD  ++N+++     AG +E A+   + 
Sbjct: 161 TLNIMVHSYCKTLQFGEV-DTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDS 219

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M   G++P  +TY+ + KG     +   A +V + +   G  PD+ ++ +LI G+C+ G 
Sbjct: 220 MVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGE 279

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           +EE L+  + M  +    +V+++S L+    + G +D A   L EM   GL PD V Y++
Sbjct: 280 LEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTM 339

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           +I G C+   + +A+++ +EM +    P+   +  +L GLC++  +++A    + +    
Sbjct: 340 VIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERG 399

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              D+  +  +I GY + GNI +A+Q +  + ++R+ P IVT+N+LI G C+ G +  A 
Sbjct: 400 VPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKAN 459

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            L D +    + P+ VTY+  ++++CE+G +    A L EM  K I P  +TY  +IKG 
Sbjct: 460 ELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGY 519

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           C+   + +  Q L  M    V PD ITYNT+I  + K   + +AF LL  M   N++P +
Sbjct: 520 CRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDA 579

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TYN++I G  V+G+++ AD +   +    I   +  Y ++I  H   G+  K+     +
Sbjct: 580 VTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDE 639

Query: 579 MVEKGF 584
           M++KG 
Sbjct: 640 MLQKGL 645



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 253/455 (55%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T+++++D   +   ++ A+  +     K   P +V+ N+++    + G  + A+ +F
Sbjct: 193 DVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVF 252

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G+ PD  S+N+LI G C AG +EEAL F  +M    V PD +++S L   F   
Sbjct: 253 RAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRR 312

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A + ++++   G  PD V YT++I G+C+ G + E L++R+ M++ G   +V+ Y
Sbjct: 313 GEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTY 372

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL+ +CK  R+ +A  LL EM+  G+ PDL T++ LI G C+   + KA+Q ++ +  
Sbjct: 373 NTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISD 432

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +R+ P+   +  ++ G+C +  + +A   +D +       + V Y+I+ID + + G +  
Sbjct: 433 QRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDN 492

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A     +++ K I P+I+T+NS+I G+C++G V+  ++ L  ++   + P  +TY T ++
Sbjct: 493 AFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIH 552

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            Y +EG +     LL+ ME + + P  VTY ++I G      +QEA  + + M   G+ P
Sbjct: 553 GYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEP 612

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           D+ TY ++I       + +K+FQL ++M    L P
Sbjct: 613 DRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/533 (25%), Positives = 260/533 (48%), Gaps = 20/533 (3%)

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           + G+  +    + L+L      + ++ NI++H  C      E     ++M +  V PD +
Sbjct: 136 RAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV 195

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           T++++         +  A  +I  ++ KG  P +VTY  ++ G  + G  ++  ++   M
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
            + G   +V ++++L+   C++G ++EAL    EM    + PD+V++S LI    ++ ++
Sbjct: 256 DACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEM 315

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             A +   EM    + P+   +  ++ G C   ++ EA    D ++   C+ DVV YN +
Sbjct: 316 DHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTL 375

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           ++G  K   + +A +L  ++ E+ + P + TF +LI+G+C++G +  A +  DTI    L
Sbjct: 376 LNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL 435

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P  VTY T ++  C +G++ +   L  +M ++ I P HVTY+++I   C++ ++  A  
Sbjct: 436 RPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFA 495

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
            L++M   G+ P+ +TYN+II+ +C+  ++ K  Q L +M    + P   TYN LI G  
Sbjct: 496 FLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYV 555

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             G +  A  LL  ++  N+    V Y  II      G++ +A   + +M  +G E    
Sbjct: 556 KEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIE---- 611

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                           PD+     M+      G+    F+L   M++ GL PD
Sbjct: 612 ----------------PDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 256/505 (50%), Gaps = 6/505 (1%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           D Y  +  S +  N YT +I++   C+  +  +    + E   +   P VV+ N ++   
Sbjct: 145 DAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDAR 204

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
            + G  E A  L   M+  G+ P   +YN ++ GL   G  ++A E    M   GV PD 
Sbjct: 205 FRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDV 264

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
            ++++L  GF    ++  A +  +++  +   PD+V+++ LI  + + G ++   +    
Sbjct: 265 RSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLRE 324

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   G   + + Y++++   C++G + EAL +  EM A G  PD+VTY+ L+ GLCK+ +
Sbjct: 325 MREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERR 384

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           +  A +L NEM  + + P+      ++ G C    I +A  +FD++       D+V YN 
Sbjct: 385 LSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNT 444

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDG  + G++G+A +L+  +  + I P+ VT++ LI   C+ G+V +A   LD +   G
Sbjct: 445 LIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKG 504

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P+ +TY + +  YC  GN+ +    L +M    + P  +TY  +I G  K+ K+ EA 
Sbjct: 505 IVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAF 564

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            LL+ M    V PD +TYN II  F    ++++A  +  +M    +EP   TY  +I+G 
Sbjct: 565 NLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGH 624

Query: 529 CVNGDLKNADCLLVSLQEHNISLTK 553
            V G+ K       S Q H+  L K
Sbjct: 625 VVAGNSKK------SFQLHDEMLQK 643



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 140/318 (44%), Gaps = 26/318 (8%)

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
           SL+ S+      +++++I  Y +     EA + +R L++ R+       N+L+    + G
Sbjct: 79  SLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAG 138

Query: 393 K---VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
                ADA RL+ +      E +  T    +++YC+      +  ++ EME + + P  V
Sbjct: 139 WPHLTADAYRLVLS---SNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV 195

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           T+ V++    +   ++ A+ L++ M   G+ P  +TYN++++   +     KA ++   M
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               + P   ++N+LI G C  G+L+ A      ++   ++   V+++ +I      G++
Sbjct: 256 DACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEM 315

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
             A  +  +M E              F +M      PD  I  +++  F + G +     
Sbjct: 316 DHAAEYLREMRE--------------FGLM------PDGVIYTMVIGGFCRAGLMLEALR 355

Query: 630 LAAVMIKSGLLPDKFLIN 647
           +   M+  G LPD    N
Sbjct: 356 VRDEMVAFGCLPDVVTYN 373


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 178/610 (29%), Positives = 318/610 (52%), Gaps = 30/610 (4%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPR------- 61
           + +A  +   MK+L  +     Y +L+  L  T   +I   L+ ++ +++T +       
Sbjct: 286 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEM-LNDTSQYGIKCIR 344

Query: 62  -NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            +V T+S++ID LC++ ++ +A   L+    +     +V+ + ++   C       A  L
Sbjct: 345 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 404

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL----EFTNDMGRHGVE--PDAITYSIL 174
           F  M K G  PDA +Y  L+ GLC  G++  AL    E  ND GR+G++  P  I+YSI+
Sbjct: 405 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 464

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G     +   A ++ +++  +G  PD+++YT LI G+C  G  E+   L   ML  G 
Sbjct: 465 IDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGI 524

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           + +V   SVL+  +CK G++ EA  LL  +   G   D+VT + L++GLC + ++ KA Q
Sbjct: 525 QPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQ 584

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS------NCIQDVVLYNI 348
           L+ +M      PN      ++ GLC+   I  A     +++        NC  + + Y+I
Sbjct: 585 LFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSI 644

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDG  K G   EA +L++++    + P ++++ SLI+GFC++GK  DA+ L + +   G
Sbjct: 645 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 704

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           ++P   T++  ++  C+EG +     LL+ M  +   P  VTYT ++KGLC   ++ EA 
Sbjct: 705 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEAT 764

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM------WLHNLEPTSATYN 522
           QL   M  +G  PD +TY T+++  C+  +++ A +L  +M      +  N +P   +Y+
Sbjct: 765 QLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYS 824

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           I+IDGLC +G    A  L   ++   +    ++YT++I   C  G +  A   F +MV++
Sbjct: 825 IIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQ 884

Query: 583 GFEISIRDYT 592
           G +++   Y+
Sbjct: 885 GVQLNAVTYS 894



 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 191/671 (28%), Positives = 315/671 (46%), Gaps = 100/671 (14%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPR------- 61
           + +A ++   M++L  +    TY +L+  L  T   +I   L+ ++ +++T R       
Sbjct: 105 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEM-LNDTGRYGIKCKP 163

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            + + SI+IDGLC+  R  +A    +E   +   P V+S  +++  +C  G  E AK LF
Sbjct: 164 TLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLF 223

Query: 122 CLMLKYGLHPDA-----------------------------------FSYNILIHGLCIA 146
             ML  G+ PD                                     +Y+ LI GLC+ 
Sbjct: 224 NEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMK 283

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL-------IKGS 199
             + EA +    M + G  PDAI Y  L KG     +I+ A  + Q++L       IK  
Sbjct: 284 HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCI 343

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            PD+ T ++LI   C+ G V E  +L EVM+ +G  L+++ YS L+  +C   RI EA  
Sbjct: 344 RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATW 403

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK------RISPNSFAHGA 313
           L   M+ +G +PD +TY  L++GLC+   ++ A+QL+ EM +       +  P   ++  
Sbjct: 404 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 463

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           I+ GLC+     EAR  F+ +     + DV+ Y  +I G+   G   +A  L+ ++++  
Sbjct: 464 IIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTI----------------------------- 404
           I P + T + LI   CK GKV +A +LL+ +                             
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKAT 583

Query: 405 ----KLH--GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM--ETKAIG----PTHVTYT 452
               K+   G  P+ VT  T M   C+ GNI+  L L + M  +T   G    P  ++Y+
Sbjct: 584 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 643

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
           ++I GLCK  +  EA +L ++M  +GV PD I+Y ++I  FC+    + A  L N+M   
Sbjct: 644 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI 703

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            ++P   T+++LID LC  G +  A+ LL  + +       V YTT++K  C    + +A
Sbjct: 704 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 763

Query: 573 MTFFCQMVEKG 583
              F +M + G
Sbjct: 764 TQLFMKMQKLG 774



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 190/607 (31%), Positives = 302/607 (49%), Gaps = 49/607 (8%)

Query: 53  DIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
           DI       +V T+S++ID LC++ ++ +A   L+    +     +V+ + ++   C   
Sbjct: 44  DIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEH 103

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL----EFTNDMGRHGV--EP 166
               A  LF  M K G  PDA +Y  L+ GLC  G++  AL    E  ND GR+G+  +P
Sbjct: 104 RISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKP 163

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
             I+YSI+  G     +   A ++ +++  +G  PD+++YT LI G+C  G  E+   L 
Sbjct: 164 TLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLF 223

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
             ML  G + +V    VL+   CK G++ EA  LL  M   G   D+VTYS LI+GLC +
Sbjct: 224 NEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMK 283

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE-----------KEMITEARMYFDSLI 335
            ++ +A QL+  M      P++ A+G ++ GLC+           +EM+ +   Y     
Sbjct: 284 HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYG---- 339

Query: 336 MSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
              CI+ DV   +++ID   K G + EA +L   +I++     IVT+++LI G C   ++
Sbjct: 340 -IKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRI 398

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM--ETKAIG----PTH 448
           ++A  L  +++  G  P A+TY T M   C+ GNI   L L QEM  +T   G    PT 
Sbjct: 399 SEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTL 458

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           ++Y+++I GLCK  +  EA +L E+M   G+ PD I+Y T+I  FC      KA  L N+
Sbjct: 459 ISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 518

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    ++P   T ++LID LC  G +  A+ LL  + +    L  V  TT++K  C +  
Sbjct: 519 MLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHR 578

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
           + KA   F +M + G             CM       P+   C  ++    Q G++    
Sbjct: 579 ISKATQLFLKMQKLG-------------CM-------PNVVTCATLMKGLCQSGNIKIAL 618

Query: 629 ELAAVMI 635
           EL   M+
Sbjct: 619 ELHKNML 625



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/559 (29%), Positives = 286/559 (51%), Gaps = 23/559 (4%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           ML  +  + G V +A  ++  M +    + I TY++L+  L    R ++  W      K+
Sbjct: 352 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL 411

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA------GKEFGPSVVSLNAIMSRYCK 110
              P +  T   ++ GLCQ   +  A+   QE        G +  P+++S + I+   CK
Sbjct: 412 GCRP-DAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 470

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
               + A+ LF  M   G+ PD  SY  LIHG C++G  E+A    N+M   G++PD  T
Sbjct: 471 DRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 530

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
            S+L        ++  A K+++ ++ +G   D+VT T L+ G C    + +  +L   M 
Sbjct: 531 SSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQ 590

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA------VGLKPDLVTYSILIRGLC 284
             G   NV+  + L+  +C+SG I  AL L   M +      +  KP+ ++YSI+I GLC
Sbjct: 591 KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLC 650

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K  +  +A +L+ EM +  + P+  ++ +++ G C      +A+  F+ ++      DV 
Sbjct: 651 KCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 710

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            ++++ID   K G + EA +L   +I++   P+ VT+ +L+ G C N ++++A +L   +
Sbjct: 711 TFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKM 770

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM--ETKAIG----PTHVTYTVVIKGL 458
           +  G  P  VTY T M   C+ GNI+  L L ++M  +T   G    P  ++Y+++I GL
Sbjct: 771 QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGL 830

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK  +  EA +L ++M  +GV P+ I+Y ++I  FC+   L  A  L N+M    ++  +
Sbjct: 831 CKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNA 890

Query: 519 ATYNILIDGLCVNGDLKNA 537
            TY+++I G C  G +  A
Sbjct: 891 VTYSVMIHGFCKEGQIDKA 909



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 159/521 (30%), Positives = 261/521 (50%), Gaps = 34/521 (6%)

Query: 96  PSVVSLNAIMSRYCKL-----GFAEVA----KGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           P   + N +++  C +     G A +A    +G    ++ Y + PD  + ++LI  LC  
Sbjct: 8   PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGF---HLLSQISGAWKVIQKLLIKGSDPDI 203
           G + EA E    M + G   D +TYS L KG    H +S+ +  +  +QKL   G  PD 
Sbjct: 68  GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL---GCRPDA 124

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQ----GFKL--NVIAYSVLLSSMCKSGRIDEA 257
           +TY  L+ G CQ GN+   L+L + ML+     G K    +I+YS+++  +CK  R DEA
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             L  EM+A G+ PD+++Y+ LI G C   K  KA  L+NEM    I P+    G ++  
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDM 244

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
            C++  + EA    + ++   CI D+V Y+ +I G      I EA QL+  + +    P 
Sbjct: 245 FCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPD 304

Query: 378 IVTFNSLIYGFCKNGKVADA----RRLLDTIKLHGLE---PSAVTYTTFMNAYCEEGNIQ 430
            + + +L+ G C+ GK+  A    + +L+    +G++   P   T +  ++  C+EG + 
Sbjct: 305 AIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVI 364

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               LL+ M  +      VTY+ +IKGLC + ++ EA  L   M  +G  PD ITY T++
Sbjct: 365 EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLM 424

Query: 491 RSFCKCKDLRKAFQLLNQM------WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           +  C+  ++  A QL  +M      +    +PT  +Y+I+IDGLC +     A  L   +
Sbjct: 425 KGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEM 484

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           +   I    ++YTT+I   C  G   KA   F +M++ G +
Sbjct: 485 KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQ 525



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/514 (28%), Positives = 258/514 (50%), Gaps = 58/514 (11%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPR------- 61
           + +A ++   M++L  +    TY +L+  L  T   +I   L+ ++ +++T R       
Sbjct: 398 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEM-LNDTGRYGIKCKP 456

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            + + SI+IDGLC+  R  +A    +E   +   P V+S   ++  +C  G  E AK LF
Sbjct: 457 TLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 516

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  G+ PD  + ++LI  LC  G + EA +    + + G   D +T + L KG  + 
Sbjct: 517 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMK 576

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ------GFK 235
            +IS A ++  K+   G  P++VT   L+ G CQ GN++  L+L + MLS         K
Sbjct: 577 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCK 636

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            N I+YS+++  +CK GR DEA  L  EM+A+G+ PD+++Y+ LI G C+  K   A  L
Sbjct: 637 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 696

Query: 296 YNEMCSKRISP-----------------------------------NSFAHGAILLGLCE 320
           +NEM    + P                                   N+  +  ++ GLC 
Sbjct: 697 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 756

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK------RI 374
            + I+EA   F  +    C+ DVV Y  ++ G  + GNI  A++L+++++          
Sbjct: 757 NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNF 816

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P +++++ +I G CK+G+  +AR L   +K  G+ P+ ++YT+ ++ +C  G ++    
Sbjct: 817 KPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKH 876

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L  EM  + +    VTY+V+I G CK+ ++ +A+
Sbjct: 877 LFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 155/326 (47%), Gaps = 32/326 (9%)

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M   GL PD  T++ILI  LC                 KR++    A   I+        
Sbjct: 1   MRLAGLFPDSFTFNILINCLCN---------------VKRVNEGLAAMAGIM-------- 37

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
               R Y   ++  +   DV   +++ID   K G + EA +L   +I++     IVT+++
Sbjct: 38  ---RRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYST 94

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM--ET 441
           LI G C   ++++A  L  +++  G  P A+TY T M   C+ GNI   L L QEM  +T
Sbjct: 95  LIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDT 154

Query: 442 KAIG----PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
              G    PT ++Y+++I GLCK  +  EA +L ++M   G+ PD I+Y ++I  FC   
Sbjct: 155 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSG 214

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
              KA  L N+M    ++P   T  +LID  C  G +  A+ LL  +      L  V Y+
Sbjct: 215 KWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYS 274

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG 583
           T+IK  C +  + +A   F  M + G
Sbjct: 275 TLIKGLCMKHRISEATQLFMSMKKLG 300


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 272/529 (51%), Gaps = 16/529 (3%)

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP-DAI 169
           LG     +  F ++   G  PD F++N  +     AG + EA+     MGR G  P +A 
Sbjct: 5   LGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAF 64

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+++  G     +   A +V  ++  +   P+ +TY  +I G+ + G++E G +LR+ M
Sbjct: 65  SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 124

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           +  G K N I Y+VLLS +C++GR+ E   LL EM +  + PD  TYSIL  GL +    
Sbjct: 125 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 184

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
              + L+ +     ++   +    +L GLC+   ++ A     SL+ +  +   V+YN +
Sbjct: 185 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 244

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           I+GY + G +  A   + Q+  + I P  +T+N+LI G CK  ++ +A+ LL  ++ +G+
Sbjct: 245 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 304

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P+  T+ T ++AY   G +++   +L EM+   + P  V+Y  ++   CK  K+ EAV 
Sbjct: 305 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 364

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +L+DM+   V P+   YN II ++ +     +AF L+ +M  + + P+  TYN+LI GLC
Sbjct: 365 ILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC 424

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
               +  A+ ++ SL  H +    V+Y T+I A C  G++ KA+    +M + G + ++R
Sbjct: 425 NQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVR 484

Query: 590 DYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
            Y +                 +  M+ N   P   I  +M+ A+ + G+
Sbjct: 485 TYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 533



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 252/487 (51%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+  S N +++   + G    A  +F  M +  + P+  +YN +I G    G +E     
Sbjct: 61  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + M  HG++P+AITY++L  G     ++     ++ ++  +   PD  TY++L  G  +
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G+ +  L L    L  G  +     S+LL+ +CK G++  A  +L  +   GL P  V 
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G C+  ++  A   + +M S+ I P+   + A++ GLC+ E IT A+     + 
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            +     V  +N +ID Y + G + +   +  ++ E  + P++V++ S++  FCKNGK+ 
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 360

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  +LD +    + P+A  Y   ++AY E G   +   L+++M++  I P+ VTY ++I
Sbjct: 361 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 420

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           KGLC Q ++ EA +++  +    + PD ++YNT+I + C   ++ KA  L  +M  + ++
Sbjct: 421 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 480

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
            T  TY+ LI GL   G L   + L   + ++N+  +   +  +++A+   G+  KA   
Sbjct: 481 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDL 540

Query: 576 FCQMVEK 582
             +M++K
Sbjct: 541 RKEMLQK 547



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 234/485 (48%), Gaps = 35/485 (7%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N ++ ++VI G+ +  R  DA+    E   +   P+ ++ N ++  + K G  E    
Sbjct: 60  PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR 119

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M+ +GL P+A +YN+L+ GLC AG M E     ++M    + PD  TYSIL  G  
Sbjct: 120 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 179

Query: 180 -------LLS----------------------------QISGAWKVIQKLLIKGSDPDIV 204
                  +LS                            ++S A +V+Q L+  G  P  V
Sbjct: 180 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 239

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            Y  LI GYCQ G +E        M S+  K + I Y+ L++ +CK+ RI  A  LL EM
Sbjct: 240 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 299

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           +  G+ P + T++ LI    +  ++ K   + +EM    + PN  ++G+I+   C+   I
Sbjct: 300 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 359

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            EA    D +   + + +  +YN +ID YV+ G   +A  L  ++    ISPSIVT+N L
Sbjct: 360 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 419

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G C   ++++A  +++++  H L P AV+Y T ++A C  GNI + L L Q M    I
Sbjct: 420 IKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 479

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
             T  TY  +I GL    +L E   L + M    V P    +N ++ ++ K  +  KA  
Sbjct: 480 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 539

Query: 505 LLNQM 509
           L  +M
Sbjct: 540 LRKEM 544



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 218/473 (46%), Gaps = 38/473 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL-YNLRHTDIM--WDLYDDIKVSETPRNVY 64
           R G   DAV V  +M E  +  +  TYN+++  +++  D+   + L D +       N  
Sbjct: 75  RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAI 134

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGP-------------------SVVSL---- 101
           T ++++ GLC+  R+ +    L E A ++  P                   +++SL    
Sbjct: 135 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 194

Query: 102 ------------NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                       + +++  CK G   +A+ +   ++  GL P    YN LI+G C  G +
Sbjct: 195 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 254

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           E A      M    ++PD ITY+ L  G     +I+ A  ++ ++   G +P + T+  L
Sbjct: 255 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 314

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I  Y + G +E+   +   M   G K NV++Y  ++++ CK+G+I EA+ +L +M    +
Sbjct: 315 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 374

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P+   Y+ +I    +     +A  L  +M S  ISP+   +  ++ GLC +  I+EA  
Sbjct: 375 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 434

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             +SL     I D V YN +I      GNI +A+ L +++ +  I  ++ T++ LI G  
Sbjct: 435 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLG 494

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
             G++ +   L   +  + + PS   +   + AY + GN  +   L +EM  K
Sbjct: 495 GAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 171/345 (49%), Gaps = 35/345 (10%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           YT SI+++GLC+  ++  A   LQ        P+ V  N +++ YC+ G  E A   F  
Sbjct: 204 YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 263

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M    + PD  +YN LI+GLC A  +  A +   +M  +GV P   T++ L   +    Q
Sbjct: 264 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 323

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +   + V+ ++   G  P++V+Y  ++  +C+ G + E + + + M  +    N   Y+ 
Sbjct: 324 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 383

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ +  + G  D+A  L+ +M++ G+ P +VTY++LI+GLC Q ++ +A ++ N + + R
Sbjct: 384 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 443

Query: 304 ISPNSFAHGAILLGLCEKEMITEA-----RMY---------------------------- 330
           + P++ ++  ++   C +  I +A     RM+                            
Sbjct: 444 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 503

Query: 331 --FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
             +  ++ +N +    ++NIM++ Y K GN  +A  L +++++KR
Sbjct: 504 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 548



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 152/334 (45%), Gaps = 16/334 (4%)

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL-IEKRISPSIVTFNS 383
            + R  F  L  +    D   +N  +   V  G++GEAV + R++  +    P+  ++N 
Sbjct: 9   ADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNV 68

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           +I G  + G+  DA  + D +    + P+ +TY T ++ + + G+++    L  +M    
Sbjct: 69  VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 128

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           + P  +TY V++ GLC+  ++ E   LL++M    + PD  TY+ +     +  D +   
Sbjct: 129 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 188

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L  +   + +     T +IL++GLC +G +  A+ +L SL    +  T+V Y T+I  +
Sbjct: 189 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 248

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQ 608
           C  G++  A + F QM  +  +     Y                +     M  NG  P  
Sbjct: 249 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 308

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           E    ++ A+ + G L   F + + M ++GL P+
Sbjct: 309 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 342



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 140/302 (46%), Gaps = 5/302 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y +TG +  A     +MK   +K    TYN+L+  L    R T+   DL  +++ +    
Sbjct: 248 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ-DLLMEMQDNGVNP 306

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V T + +ID   +  +L+   + L E       P+VVS  +I++ +CK G    A  + 
Sbjct: 307 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 366

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M    + P+A  YN +I      G  ++A      M  +G+ P  +TY++L KG    
Sbjct: 367 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 426

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           SQIS A ++I  L      PD V+Y  LI   C  GN+++ L L++ M   G K  V  Y
Sbjct: 427 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 486

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
             L+S +  +GR++E   L  +M    + P    ++I++    K     KA  L  EM  
Sbjct: 487 HQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 546

Query: 302 KR 303
           KR
Sbjct: 547 KR 548



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 20/274 (7%)

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM-ETKAIGPTHVT 450
           G+ AD RR    +   G  P    +   + A    G++   + +L+ M    A  P   +
Sbjct: 6   GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 65

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y VVI G+ +  +  +AV++ ++M    V P+ ITYNT+I    K  DL   F+L +QM 
Sbjct: 66  YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
            H L+P + TYN+L+ GLC  G +     LL  +    +      Y+ +       GD  
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 185

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFC-----------------MMLSNGFPPDQEICEV 613
             ++ F + ++ G  ++I DYT S                     +++ G  P + I   
Sbjct: 186 AMLSLFGKYLKNG--VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 243

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           ++  + Q G+L   F     M    + PD    N
Sbjct: 244 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 277


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 172/628 (27%), Positives = 314/628 (50%), Gaps = 4/628 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           Y R G V +AV V  +M   D + S+Q+YN++   L    +      +Y  +K      +
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPD 145

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT++I +   C   R   A+  L    G+    + VS  A++S + K      A  LF 
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFD 205

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            MLK G+ PD  ++N LIH LC  G+++E+ +  + + + GV P+  T++I  +G     
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            I  A ++++ ++ +G  PD+++Y  LICG+C+   + E       M++ G + N   Y+
Sbjct: 266 AIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYN 325

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +++  CK+G +  A  +L +    G  PD  TYS LI GLC    +++A+ ++ E   K
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
               +   +  ++ GL ++ ++ +A      ++   C  D+  YN++++G  K+G + +A
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +    I K   P I TFN+LI G+CK   +  A  +LDT+  HG+ P  +TY T +N 
Sbjct: 446 NGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNG 505

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+   +  ++   + M  K   P  +TY ++I+  CK  K+ EA++L ++M   G+TPD
Sbjct: 506 LCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWL-HNLEPTSATYNILIDGLCVNGDLKNADCLL 541
            +T  T+I   C   +L KA++L   +   +    ++A +NI+I+  C   ++  A+ L 
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLF 625

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
             +   + +     Y  +I ++C  G++  A TF  + + KG   S     K   C+ ++
Sbjct: 626 HKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVT 685

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFE 629
           +       I  +M+       ++ S+FE
Sbjct: 686 HRLSEAVVIINLMVQNGIVPEEVNSIFE 713



 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 164/588 (27%), Positives = 285/588 (48%), Gaps = 26/588 (4%)

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           ++ ++Q+A+   +     +  PSV S NAIM+   + G+   A  ++  M   G++PD +
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVY 147

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           ++ I +   CI G    AL   N+M   G E +A++Y  +  GF+  +    A+ +  ++
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEM 207

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           L +G  PDI+T+  LI   C+ GNV+E  KL   ++ +G   N+  +++ +  +C+ G I
Sbjct: 208 LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAI 267

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           DEA  LL  + + GL PD+++Y+ LI G CK  K+ +A    ++M +  + PN F +  I
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G C+  M+  A       +    I D   Y+ +I+G    G++  A+ ++ + +EK  
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
             SI+ +N+L+ G  K G V  A +L+  +  HG  P   TY   +N  C+ G +     
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +L +   K   P   T+  +I G CKQ  + +A+++L+ M   G+TPD ITYNT++   C
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K + L         M      P   TYNILI+  C +  +  A  L   ++   ++   V
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF---------- 604
              T+I   C+ G++ KA   F   +EK ++ S   Y+ + F +M+ N F          
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVT-IEKEYKFS---YSTAIFNIMI-NAFCEKLNVSMAE 622

Query: 605 -----------PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                       PD     VM+ ++ + G++          I  GL+P
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP 670



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 251/505 (49%), Gaps = 9/505 (1%)

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
            IM  Y + G  + A  +F  M  Y   P   SYN +++ L   G   +A +    M   
Sbjct: 81  GIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI 140

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY----CQIGN 218
           G+ PD  T++I  K F +  + + A +++  +  +G + + V+Y  +I G+    CQI  
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQI-- 198

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
             E   L + ML QG   +++ ++ L+  +CK G + E+  L  ++   G+ P+L T++I
Sbjct: 199 --EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
            I+GLC++  + +A +L   + S+ ++P+  ++  ++ G C+   + EA  Y   ++ S 
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG 316

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              +   YN +I+G+ K G +  A ++ R  + K   P   T++SLI G C +G +  A 
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            +       G + S + Y T +    ++G + + L L+++M      P   TY +V+ GL
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK   L +A  +L D    G  PD  T+NT+I  +CK +++ KA ++L+ M  H + P  
Sbjct: 437 CKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TYN L++GLC    L N      ++ E   +   + Y  +I++ C +  V +AM  F +
Sbjct: 497 ITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKE 556

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNG 603
           M  +G    I     +  C + SNG
Sbjct: 557 MKTRGLTPDIVTLC-TLICGLCSNG 580



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/539 (23%), Positives = 235/539 (43%), Gaps = 57/539 (10%)

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV--TYTVLICGY 213
           T D  +H +E    TY  + +   L  +      V+ ++  K  D  ++   Y  ++  Y
Sbjct: 32  TEDGFKHTLE----TYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLEGVYIGIMRDY 86

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
            + G V+E + + E M     + +V +Y+ +++ + + G   +A  +   M+ +G+ PD+
Sbjct: 87  GRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDV 146

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            T++I ++  C   +   A++L N M  +    N+ ++ A++ G  ++    EA   FD 
Sbjct: 147 YTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDE 206

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++      D++ +N +I    K GN+ E+ +L+ +++++ + P++ TFN  I G C+ G 
Sbjct: 207 MLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + +A RLL++I   GL P  ++Y T +  +C+   +      L +M    + P   TY  
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK------------ 501
           +I G CK   +Q A ++L D    G  PD+ TY+++I   C   D+ +            
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386

Query: 502 -----------------------AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
                                  A QL+  M  H   P   TYN++++GLC  G L +A+
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK----- 593
            +L              + T+I  +C + ++ KA+     M+  G    +  Y       
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506

Query: 594 ----------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                       F  ML  G  P+     +++ +F +   +    EL   M   GL PD
Sbjct: 507 CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 213/498 (42%), Gaps = 105/498 (21%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMWD---LYDDIKVSETPRNV 63
           R G + +A  ++  +    L   + +YN+L+    +H+ ++     L+  +     P N 
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP-NE 321

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T + +I+G C+   +Q+A   L++   K F P   + +++++  C  G    A  +F  
Sbjct: 322 FTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYE 381

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
            ++ G       YN L+ GL   G + +AL+   DM  HG  PD  TY+++  G   +  
Sbjct: 382 AMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGC 441

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +S A  ++   + KG  PDI T+  LI GYC+  N+++ +++ + MLS G   +VI Y+ 
Sbjct: 442 LSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNT 501

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           LL+ +CK+ ++D  +     M   G  P+++TY+ILI   CK  KV +A++L+ EM ++ 
Sbjct: 502 LLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561

Query: 304 ISPNSFAHGAILLGLC------------------------------------EKEMITEA 327
           ++P+      ++ GLC                                    EK  ++ A
Sbjct: 562 LTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMA 621

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN----------------------------- 358
              F  +  S+C  D   Y +MID Y K GN                             
Sbjct: 622 EKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNC 681

Query: 359 ------IGEAVQLYRQLIEKRISP---------------------------SIVTFNS-- 383
                 + EAV +   +++  I P                           S +T+ S  
Sbjct: 682 LCVTHRLSEAVVIINLMVQNGIVPEEVNSIFEADKKEVAAPKIVVEYLLKKSHITYYSYE 741

Query: 384 LIYGFCKNGKVADARRLL 401
           L+Y   +N KV +AR LL
Sbjct: 742 LLYDGIRNRKVVEARPLL 759


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 159/491 (32%), Positives = 258/491 (52%), Gaps = 24/491 (4%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCL--MLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           P+V + N ++  +C +G  E+ KGL C   M + G  P+  +YN LI   C  G ++EA 
Sbjct: 8   PNVYTYNILIRGFCSVG--ELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
                M   G++P+ I+Y+++  G      +  AW++++++  KG  PD VTY  L+ GY
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+ GN  + L +   M+  G   +V+ Y+ L++SMCK+  ++ A+    +M   GL+P+ 
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            TY+ LI G  +Q  +++A ++ NEM     SP+   + A + G C  E + EA      
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++      DVV Y+ +I G+ + G +  A Q+ ++++EK +SP  VT++SLI G C+  +
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + +A  L   +   GL P   TYTT +NAYC EG++ + L L  EM  K   P  VTY+V
Sbjct: 306 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSV 365

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I GL KQ + +EA +LL  +      P  +TY+T+I + C                  N
Sbjct: 366 LINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIEN-CS-----------------N 407

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           +E  S     LI G C+ G +  AD +  S+ E N    +  Y  II  HC  G++ KA 
Sbjct: 408 IEFKSVV--ALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAF 465

Query: 574 TFFCQMVEKGF 584
             + +M+  GF
Sbjct: 466 NLYKEMIHSGF 476



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 151/498 (30%), Positives = 258/498 (51%), Gaps = 35/498 (7%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M R  V P+  TY+IL +GF  + ++        ++   G  P++VTY  LI  YC++G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           ++E   L + M S+G + N+I+Y+V+++ +C+ G + EA  +L EM   G  PD VTY+ 
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           L+ G CK+   H+A+ ++ EM    +SP+   + A++  +C+   +  A  +FD + +  
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              +   Y  +IDG+ + G + EA ++  ++ E   SPS+VT+N+ I+G C   ++ +A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            ++  +   GL P  V+Y+T ++ +C +G + R   + QEM  K + P  VTY+ +I+GL
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           C+  +L EA  L ++M  +G+ PD+ TY T+I ++C   DL KA  L ++M      P +
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 360

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT---------------IIKAH 563
            TY++LI+GL      + A  LL  L       + V Y T               +IK  
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGF 420

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           C +G +H+A   F  MVE+  +                    P + +  V++    +GG+
Sbjct: 421 CMKGLMHEADRVFESMVERNHK--------------------PGEAVYNVIIHGHCRGGN 460

Query: 624 LGSVFELAAVMIKSGLLP 641
           L   F L   MI SG +P
Sbjct: 461 LPKAFNLYKEMIHSGFVP 478



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/491 (29%), Positives = 233/491 (47%), Gaps = 15/491 (3%)

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           S    NVYT +I+I G C    LQ  +    E       P+VV+ N ++  YCK+G  + 
Sbjct: 4   SRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDE 63

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A GL   M   G+ P+  SYN++I+GLC  GSM+EA E   +MG  G  PD +TY+ L  
Sbjct: 64  AFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLN 123

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+        A  +  +++  G  P +VTYT LI   C+  N+   ++  + M  +G + 
Sbjct: 124 GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP 183

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N   Y+ L+    + G ++EA  +L EM   G  P +VTY+  I G C  +++ +A+ + 
Sbjct: 184 NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 243

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM  K ++P+  ++  I+ G C K  +  A      ++      D V Y+ +I G  ++
Sbjct: 244 QEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 303

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             + EA  L +++++  + P   T+ +LI  +C  G +  A  L D +   G  P AVTY
Sbjct: 304 RRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 363

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY---------------TVVIKGLCKQ 461
           +  +N   ++   +    LL ++  +   P+ VTY                 +IKG C +
Sbjct: 364 SVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMK 423

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
             + EA ++ E M      P +  YN II   C+  +L KAF L  +M      P + T 
Sbjct: 424 GLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTV 483

Query: 522 NILIDGLCVNG 532
             LI  L   G
Sbjct: 484 ITLIKALFKEG 494



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 235/462 (50%), Gaps = 18/462 (3%)

Query: 30  SIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           ++ TYN+L+     +   D  + L   +       N+ + +++I+GLC++  +++A   L
Sbjct: 44  NVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEIL 103

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           +E   K F P  V+ N +++ YCK G    A  +   M++ G+ P   +Y  LI+ +C A
Sbjct: 104 EEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA 163

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
            ++  A+EF + M   G+ P+  TY+ L  GF     ++ A++++ ++   G  P +VTY
Sbjct: 164 RNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 223

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
              I G+C +  +EE L + + M+ +G   +V++YS ++S  C+ G +D A  +  EM  
Sbjct: 224 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 283

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G+ PD VTYS LI+GLC+  ++ +A  L  EM    + P+ F +  ++   C +  + +
Sbjct: 284 KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNK 343

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI- 385
           A    D +I    + D V Y+++I+G  K     EA +L  +LI +   PS VT+++LI 
Sbjct: 344 ALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 403

Query: 386 --------------YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
                          GFC  G + +A R+ +++     +P    Y   ++ +C  GN+ +
Sbjct: 404 NCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPK 463

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
              L +EM      P  VT   +IK L K+   +E  +++ D
Sbjct: 464 AFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 505



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 181/359 (50%), Gaps = 15/359 (4%)

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M   R+SPN + +  ++ G C    + +    F  +  + C+ +VV YN +ID Y K+G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I EA  L + +  K + P+++++N +I G C+ G + +A  +L+ +   G  P  VTY T
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +N YC+EGN  + L +  EM    + P+ VTYT +I  +CK   L  A++  + M + G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           + P++ TY T+I  F +   L +A+++LN+M      P+  TYN  I G CV   ++ A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFF 596
            ++  + E  ++   V+Y+TII   C +G++ +A     +MVEKG       Y+      
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 597 CMM-------------LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           C M             L  G PPD+     ++ A+   GDL     L   MI  G LPD
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPD 359



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 200/430 (46%), Gaps = 58/430 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G  H A+ + A+M    +  S+ TY +L+ ++   R+ +   + +D +++     N
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +IDG  +Q  L +A   L E     F PSVV+ NA +  +C L   E A G+  
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 244

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M++ GL PD  SY+ +I G C  G ++ A +   +M   GV PDA+TYS L +G   + 
Sbjct: 245 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 304

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +++ A  + Q++L  G  PD  TYT LI  YC  G++ + L L + M+ +GF  + + YS
Sbjct: 305 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYS 364

Query: 243 VLLSSMCKSGRIDEALGLLYEM---EAV-------------------------------G 268
           VL++ + K  R  EA  LL+++   E+V                               G
Sbjct: 365 VLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKG 424

Query: 269 L----------------KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           L                KP    Y+++I G C+   + KA  LY EM      P++    
Sbjct: 425 LMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVI 484

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV----QLYRQ 368
            ++  L ++ M  E        + S  + +  L  ++++   K GN+ EAV    +LY +
Sbjct: 485 TLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNM-EAVLNVSRLYNK 543

Query: 369 LIEKRISPSI 378
           L  K ++ S+
Sbjct: 544 LSLKCVASSV 553


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 189/693 (27%), Positives = 332/693 (47%), Gaps = 64/693 (9%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMWDLYDDIKVSETPRNV 63
            Y R G V +   V+  M+E     ++ TY+ ++  L R  D+  D   ++K S   + +
Sbjct: 241 AYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDV--DEALELKRSMANKGL 298

Query: 64  ----YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL----GFAE 115
               Y  + +IDG C+Q R  +    L E       P  V+  A+++ + K     G  +
Sbjct: 299 LPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQ 358

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
           V + +F   +K     + F+Y  LIHGLC  G +E+A +  ++M   G++PD  TY+ L 
Sbjct: 359 VKEEMFARKIKL----NTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLI 414

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
           +G++ +  +  A++++ ++  +    +      ++ G C  G++    +L + M+S G K
Sbjct: 415 EGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLK 474

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            N++ Y+ ++  + K GR +EA+ +L  M+  GL PD+  Y+ +I G CK  K+ +    
Sbjct: 475 PNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSY 534

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
             EM +K + PN + +GA + G C    +  A   F  ++ S    + V+   +IDGY K
Sbjct: 535 LVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCK 594

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            GN  +A   +R ++++ + P + T + LI+G  KNGK+ +A  +   +   GL P   T
Sbjct: 595 DGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFT 654

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           YT+ ++  C+EG+++    L  +M  K I P  VTY  +I GLCK  ++ +A +L + + 
Sbjct: 655 YTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIP 714

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G+  + +TY+TII  +CK  +L +AFQL + M L  + P S  Y  LIDG C  G+ +
Sbjct: 715 EKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTE 774

Query: 536 NADCLLVSLQEHNISLTK----------------------------------VAYTTIIK 561
            A  L + + E  I+ T                                   V YT +I+
Sbjct: 775 KALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIE 834

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPP 606
            HC  G++ +A   F +M ++    ++  YT                S F  M++ G  P
Sbjct: 835 YHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKP 894

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
           D     VM+ A  + G+     +L   M+  G+
Sbjct: 895 DDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGV 927



 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 168/597 (28%), Positives = 286/597 (47%), Gaps = 51/597 (8%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V +   +++ YC++G  E  K +   M + G  P+  +Y+++I GLC AG ++EALE 
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M   G+ PD   Y+ L  GF    + +    ++ ++   G  PD V YT LI G+ +
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
             ++    +++E M ++  KLN   Y  L+  +CK G +++A  L  EM  +G+KPD+ T
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G  K   + KA +L  E+  + ++ N++  GAI+ GLC    +T A   F  +I
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 ++V+Y  ++ G VK G   EA+++   + ++ +SP +  +N++I GFCK GK+ 
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV------ 449
           + +  L  +   GL+P+  TY  F++ YC  G +Q       EM    I P  V      
Sbjct: 530 EGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLI 589

Query: 450 -----------------------------TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
                                        T++V+I GL K  KLQEA+ +  ++   G+ 
Sbjct: 590 DGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLV 649

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD  TY ++I + CK  DL+ AF+L + M    + P   TYN LI+GLC  G++  A  L
Sbjct: 650 PDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAREL 709

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF---------------CQMVEKGFE 585
              + E  ++   V Y+TII  +C   ++ +A   F               C +++   +
Sbjct: 710 FDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCK 769

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
               +   S F  M+  G          ++  F + G L   ++L   M+ + + P+
Sbjct: 770 AGNTEKALSLFLGMVEEGIASTPAF-NALIDGFFKLGKLIEAYQLVEDMVDNHITPN 825



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 179/623 (28%), Positives = 298/623 (47%), Gaps = 40/623 (6%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVY 64
            + G +  A  + ++M  + +K  IQTYN L+   Y +++ +  ++L  +IK      N Y
Sbjct: 384  KIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAY 443

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
                +++GLC    L  A    QE       P++V    I+    K G  E A  +  +M
Sbjct: 444  MCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVM 503

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
               GL PD F YN +I G C AG MEE   +  +M   G++P+  TY     G+    ++
Sbjct: 504  KDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEM 563

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
              A +   ++L  G  P+ V  T LI GYC+ GN  +       ML QG   +V  +SVL
Sbjct: 564  QAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVL 623

Query: 245  LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
            +  + K+G++ EA+G+  E+   GL PD+ TY+ LI  LCK+  +  A +L+++MC K I
Sbjct: 624  IHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGI 683

Query: 305  SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            +PN   + A++ GLC+   I +AR  FD +      ++ V Y+ +I GY K  N+ EA Q
Sbjct: 684  NPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQ 743

Query: 365  LYRQL------------------------IEKRIS----------PSIVTFNSLIYGFCK 390
            L+  +                         EK +S           S   FN+LI GF K
Sbjct: 744  LFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFK 803

Query: 391  NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
             GK+ +A +L++ +  + + P+ VTYT  +  +C  GNI+    L  EM+ + + P  +T
Sbjct: 804  LGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLT 863

Query: 451  YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
            YT ++ G  +  +  E   L ++M   G+ PD + ++ ++ +  K  +  KA +L++ M 
Sbjct: 864  YTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDML 923

Query: 511  LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
               +      Y ILID LC + +L     +L  +++    L+     T++      G   
Sbjct: 924  SEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTD 983

Query: 571  KAMTFFCQMVEKG---FEISIRD 590
            +A+     MV       E S+R+
Sbjct: 984  EALRVLESMVRSFLNLLEFSVRN 1006



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 140/530 (26%), Positives = 242/530 (45%), Gaps = 50/530 (9%)

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           PD  TY+ L   +  + ++     V+  +  KG  P++VTY+V+I G C+ G+V+E L+L
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
           +  M ++G   +   Y+ L+   C+  R  E   +L EM  +GLKPD V Y+ LI G  K
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
           Q  +  A Q+  EM +++I  N+F + A++ GLC+   + +A   F  + M     D+  
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409

Query: 346 YNIMIDGYVKL-----------------------------------GNIGEAVQLYRQLI 370
           YN +I+GY K+                                   G++  A +L++++I
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
              + P+IV + +++ G  K G+  +A ++L  +K  GL P    Y T +  +C+ G ++
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
              + L EM  K + P   TY   I G C+  ++Q A +   +M   G+ P+ +    +I
Sbjct: 530 EGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLI 589

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             +CK  +  KAF     M    + P   T+++LI GL  NG L+ A  +   L +  + 
Sbjct: 590 DGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLV 649

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSF 595
                YT++I   C EGD+  A      M +KG   +I  Y                +  
Sbjct: 650 PDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAREL 709

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           F  +   G   +      ++  + +  +L   F+L   M   G+ PD F+
Sbjct: 710 FDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFV 759



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/479 (22%), Positives = 204/479 (42%), Gaps = 70/479 (14%)

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLL---------------------YEMEAVGLKPD 272
           F  N+  +S+L   +C SG    A  +L                      E+        
Sbjct: 103 FSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCYKEINGSSSSSS 162

Query: 273 LVTYSILIRGLCKQDKVHKAIQLY-----NEM-----CSKRIS----------------- 305
           +V + ILI    K+  +++A+ ++     NE      C   +S                 
Sbjct: 163 VVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYK 222

Query: 306 -------PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
                  P+ + +  ++   C    + E +     +    CI ++V Y+++I G  + G+
Sbjct: 223 GMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGD 282

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EA++L R +  K + P    + +LI GFC+  +  + + +LD +   GL+P  V YT 
Sbjct: 283 VDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTA 342

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +N + ++ +I     + +EM  + I     TY  +I GLCK   L++A  L  +M ++G
Sbjct: 343 LINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMG 402

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           + PD  TYN +I  + K +++ KA++LL ++   NL   +     +++GLC  GDL  A+
Sbjct: 403 IKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRAN 462

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------ 592
            L   +    +    V YTTI+K    EG   +A+     M ++G    +  Y       
Sbjct: 463 ELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGF 522

Query: 593 ---------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                    KS+   M++ G  P+       +  + + G++ +       M+ SG+ P+
Sbjct: 523 CKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPN 581


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 181/643 (28%), Positives = 305/643 (47%), Gaps = 20/643 (3%)

Query: 24  ELDLKVSIQTYNSLLYNL---RHTDIMWDLYDD-IKVSETPRNVYTNSIVIDGLCQQSRL 79
           E+ +   + TYN+++  L   +  D   D++   ++    P NV  N+I IDGLC+   +
Sbjct: 218 EMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTI-IDGLCKAQEV 276

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
             A    Q+   K   PS V+ N I+   CK    + A+G+F  M+  G+ PD  +YN +
Sbjct: 277 DMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTI 336

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           I GLC A ++++A      M   GV+PD +TY+I+  G      +  A  V Q+++ KG 
Sbjct: 337 IDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGV 396

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            P+  TY  LI GY   G  EE ++  + M +   + +V  Y +LL  +CK+G+ +EA  
Sbjct: 397 KPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARS 456

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           L   M   G+KP +  Y I++ G  K+  + +   L N M +  ISPN      ++    
Sbjct: 457 LFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYA 516

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           ++ MI E    F  +       +VV Y  +ID   KLG + +AV  + Q+I + ++P+ V
Sbjct: 517 KRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNV 576

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
            FNSL+YG C   K      L   +   G+ P  V + T +   C+EG +     L+  M
Sbjct: 577 VFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSM 636

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
               + P  ++Y  +I G C   ++ EAV+LL+ M   G+ P+ ++YNT++  +CK   +
Sbjct: 637 VCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRI 696

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
             A+ L  +M    + P   TYN +++GL  +G    A  L V++ +     +   Y+ I
Sbjct: 697 DNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSII 756

Query: 560 IKAHCAEGDVHKAMTFF---CQ------------MVEKGFEISIRDYTKSFFCMMLSNGF 604
           +   C      +A   F   C             M++  F+   ++     F  + +NG 
Sbjct: 757 LDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGL 816

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            P      ++     + G L  +  L +VM KSG  P+  ++N
Sbjct: 817 VPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLN 859



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 159/608 (26%), Positives = 279/608 (45%), Gaps = 40/608 (6%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDD-IKVSETPRNVYTNSIVIDGL 73
           V  KM +  +K S  TYN+++  L   +  D    ++   I     P +V  N+I IDGL
Sbjct: 282 VFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTI-IDGL 340

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           C+   +  A    Q+   K   P  ++   I+   CK    + A+G+F  M+  G+ P+ 
Sbjct: 341 CKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNN 400

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
            +YN LIHG    G  EE ++   +M  H +EPD  TY +L        + + A  +   
Sbjct: 401 GTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDS 460

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS---------------------- 231
           ++ KG  P +  Y +++ GY + G + E   L  +M++                      
Sbjct: 461 MIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAM 520

Query: 232 -------------QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
                        QG   NV+ Y  L+ ++CK GR+D+A+    +M   G+ P+ V ++ 
Sbjct: 521 IDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNS 580

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           L+ GLC  DK  K  +L+ EM ++ I P+      +L  LC++  + EAR   DS++   
Sbjct: 581 LVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMG 640

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              DV+ YN +IDG+     + EAV+L   ++   + P+IV++N+L++G+CK G++ +A 
Sbjct: 641 LKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAY 700

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            L   +   G+ P   TY T +N     G       L   M       +  TY++++ G 
Sbjct: 701 CLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGF 760

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK     EA ++ + +  + +  D IT+N +I    K      A  L   +  + L P+ 
Sbjct: 761 CKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSV 820

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TY ++ + L   G L+  DCL   +++   +        +I+     G++ +A  +  +
Sbjct: 821 VTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSK 880

Query: 579 MVEKGFEI 586
           + EK F +
Sbjct: 881 LDEKNFSL 888



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 162/631 (25%), Positives = 276/631 (43%), Gaps = 57/631 (9%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEVAKGLFCL 123
           T SIVI   C+  RL+             +    + +N ++   C      E    L   
Sbjct: 86  TYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQ 145

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN---DMGRHGVEPDAITYSILAKGFHL 180
           M + G      SYN L+ GLC     EEA E  +   D       PD ++Y+I+  GF  
Sbjct: 146 MPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFN 205

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             Q+  A+ +  ++   G  PD+VTY  +I G C+   V+    + + M+ +G K N + 
Sbjct: 206 EGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVT 262

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ ++  +CK+  +D A G+  +M   G+KP  VTY+ +I GLCK   V +A  ++ +M 
Sbjct: 263 YNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMI 322

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            + + P+   +  I+ GLC+ + I +A   F  +I      D + Y I+IDG  K  ++ 
Sbjct: 323 DRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVD 382

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGF-------------------------------- 388
            A  +++Q+I+K + P+  T+N LI+G+                                
Sbjct: 383 RAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLL 442

Query: 389 ---CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
              CKNGK  +AR L D++   G++PS   Y   ++ Y ++G +  +  LL  M    I 
Sbjct: 443 DYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGIS 502

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P H  +  VI    K+  + E + +   M   G++P+ +TY T+I + CK   +  A   
Sbjct: 503 PNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQ 562

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
            NQM    + P +  +N L+ GLC     +  + L + +    I    V + T++   C 
Sbjct: 563 FNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCK 622

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEI 610
           EG V +A      MV  G +  +  Y                      M+S G  P+   
Sbjct: 623 EGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVS 682

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
              +L  + + G + + + L   M++ G+ P
Sbjct: 683 YNTLLHGYCKAGRIDNAYCLFREMLRKGVTP 713



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 231/461 (50%), Gaps = 22/461 (4%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG- 259
           PD  TY+++I  +C+IG +E G     ++L  G++++ I  + LL  +C + R+ EA+  
Sbjct: 82  PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR---ISPNSFAHGAILL 316
           LL +M  VG +  +V+Y+ L++GLC + +  +A +L + M   +    SP+  ++  ++ 
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           G   +  + +A   F  + +S    DVV YN +IDG  K   +  A  +++Q++EK + P
Sbjct: 202 GFFNEGQVDKAYSLFLEMGVS---PDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           + VT+N++I G CK  +V  A  +   +   G++PS VTY T ++  C+   + R   + 
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF 318

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           Q+M  + + P HVTY  +I GLCK   + +A  + + M   GV PD +TY  II   CK 
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKA 378

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
           + + +A  +  QM    ++P + TYN LI G    G  +     +  +  H++      Y
Sbjct: 379 QSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTY 438

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------------TKSFFCMMLS 601
             ++   C  G  ++A + F  M+ KG + S+  Y                     +M++
Sbjct: 439 GLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVA 498

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           NG  P+  I   ++ A+ +   +  V  +   M + GL P+
Sbjct: 499 NGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPN 539



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 222/465 (47%), Gaps = 3/465 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y  TG   + V  I +M   DL+  + TY  LL  L      +    L+D +       +
Sbjct: 410 YLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPS 469

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V    I++ G  ++  L +    L         P+    N ++  Y K    +    +F 
Sbjct: 470 VTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFI 529

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + GL P+  +Y  LI  LC  G +++A+   N M   GV P+ + ++ L  G   + 
Sbjct: 530 KMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVD 589

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +     ++  ++L +G  PDIV +  ++C  C+ G V E  +L + M+  G K +VI+Y+
Sbjct: 590 KWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYN 649

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C + R+DEA+ LL  M + GLKP++V+Y+ L+ G CK  ++  A  L+ EM  K
Sbjct: 650 TLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRK 709

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            ++P    +  IL GL      +EAR  + ++I S  +  +  Y+I++DG+ K     EA
Sbjct: 710 GVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEA 769

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            ++++ L    +   I+TFN +I G  K G+  DA  L   I  +GL PS VTY      
Sbjct: 770 FKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAEN 829

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
             EEG+++ L  L   ME     P       +I+ L  + ++  A
Sbjct: 830 LIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRA 874



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 246/517 (47%), Gaps = 3/517 (0%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIK---VSETPRNVYTNSI 68
           V  A  V  +M +  +K +  TYN L++    T    ++   IK     +   +V+T  +
Sbjct: 381 VDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGL 440

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++D LC+  +  +A         K   PSV     ++  Y K G       L  LM+  G
Sbjct: 441 LLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANG 500

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + P+   +N +I        ++E +     M + G+ P+ +TY  L      L ++  A 
Sbjct: 501 ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAV 560

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
               +++ +G  P+ V +  L+ G C +   E+  +L   ML+QG + +++ ++ +L ++
Sbjct: 561 LQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNL 620

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK GR+ EA  L+  M  +GLKPD+++Y+ LI G C   ++ +A++L + M S  + PN 
Sbjct: 621 CKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNI 680

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
            ++  +L G C+   I  A   F  ++       V  YN +++G  + G   EA +LY  
Sbjct: 681 VSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVN 740

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +I+ R   SI T++ ++ GFCKN    +A ++  ++    L+   +T+   ++   + G 
Sbjct: 741 MIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGR 800

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
            +  + L   +    + P+ VTY ++ + L ++  L+E   L   M   G  P+    N 
Sbjct: 801 KEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNA 860

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           +IR      ++ +A   L+++   N    ++T ++LI
Sbjct: 861 LIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLI 897



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 223/469 (47%), Gaps = 5/469 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYD--DIKVSE--TPRNV 63
           + G  ++A  +   M    +K S+  Y  +L+       + +++D  ++ V+   +P + 
Sbjct: 447 KNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHR 506

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             N+++     +++ + + +    +   +   P+VV+   ++   CKLG  + A   F  
Sbjct: 507 IFNTVIC-AYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQ 565

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G+ P+   +N L++GLC     E+  E   +M   G+ PD + ++ +        +
Sbjct: 566 MINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGR 625

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A ++I  ++  G  PD+++Y  LI G+C    ++E +KL + M+S G K N+++Y+ 
Sbjct: 626 VMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNT 685

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           LL   CK+GRID A  L  EM   G+ P + TY+ ++ GL +  +  +A +LY  M   R
Sbjct: 686 LLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSR 745

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
              +   +  IL G C+     EA   F SL   +   D++ +NIMIDG  K G   +A+
Sbjct: 746 KLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAM 805

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L+  +    + PS+VT+  +     + G + +   L   ++  G  P++      +   
Sbjct: 806 DLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKL 865

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            + G I R  A L +++ K       T +++I    ++   Q A  L E
Sbjct: 866 LDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPE 914


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 151/506 (29%), Positives = 267/506 (52%), Gaps = 16/506 (3%)

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           + PSV++ NA++           A+  F  ML  G+ P+ ++YNIL+  LC  G  +EAL
Sbjct: 119 YAPSVLAYNAVLLALSDASLPS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 177

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
               DM   G +P+A+TY+ L   F    ++  A +++  +   G  P++VT+  ++ G 
Sbjct: 178 SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGI 237

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+ G +E+  K+ + M+ +G   + ++Y+ L+   CK G   EAL +  EM   G+ PD+
Sbjct: 238 CKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDV 297

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VT++ LI  +CK   + +A+ L  EM  + +  N     A++ G C+K  + +A +    
Sbjct: 298 VTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVRE 357

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +        VV YN +I+GY  +G + EA +L R++  K + P +VT+++++  +CKNG 
Sbjct: 358 MRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGD 417

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
              A +L   +  +G+ P A+TY++ +   CEE  +     L + M +  + P  VTYT 
Sbjct: 418 THSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTS 477

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I G CK+  ++ A+ L ++M   GV PD +TY+ +I    K    ++A +LL +++   
Sbjct: 478 LIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEE 537

Query: 514 LEPTSATYN---------------ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
             P +  Y+                L+ G C+ G +  AD +  S+ + N +L    Y+ 
Sbjct: 538 PVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSV 597

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +I  HC EG+V KA++F  QM++ GF
Sbjct: 598 LIHGHCREGNVMKALSFHKQMLQCGF 623



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 159/597 (26%), Positives = 279/597 (46%), Gaps = 57/597 (9%)

Query: 30  SIQTYNSLLYNLRHTDI--MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           S+  YN++L  L    +      +D +       NVYT +I++  LC +   ++A+  L+
Sbjct: 122 SVLAYNAVLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLR 181

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           +  G    P+ V+ N +++ +C+ G  + A+ L  +M + GL P+  ++N +++G+C AG
Sbjct: 182 DMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAG 241

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            ME+A +  ++M + G+ PD ++Y+ L  G+  +     A  V  ++  KG  PD+VT+T
Sbjct: 242 RMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFT 301

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS---------------- 251
            LI   C+ GN+E  + L   M  +G ++N I ++ L+   CK                 
Sbjct: 302 SLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQC 361

Query: 252 -------------------GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
                              GR+DEA  L+ EMEA G+KPD+VTYS ++   CK    H A
Sbjct: 362 RIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSA 421

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            QL  +M    + P++  + +++  LCE++ + +A + F ++I      D V Y  +IDG
Sbjct: 422 FQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDG 481

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           + K GN+  A+ L+ ++++  + P +VT++ LI G  K+ +  +A+RLL  +      P+
Sbjct: 482 HCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPA 541

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            + Y   M   C    ++ +LALL                   KG C +  + EA ++ +
Sbjct: 542 NIKYDALMRC-CRNAELKSVLALL-------------------KGFCMKGLMNEADKVYQ 581

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            +       D   Y+ +I   C+  ++ KA     QM      P S +   LI GL   G
Sbjct: 582 SILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKG 641

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            +  AD ++  L          A   +I  +  EG+V   +     M   G   S R
Sbjct: 642 MVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPSPR 698



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 235/488 (48%), Gaps = 47/488 (9%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
           L   + R G V  A  ++  M+E  LK ++ T+NS                         
Sbjct: 198 LVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNS------------------------- 232

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
                  V++G+C+  R++DA     E   +   P  VS N ++  YCK+G +  A  +F
Sbjct: 233 -------VVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVF 285

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+ PD  ++  LIH +C AG++E A+    +M   G++ + IT++ L  GF   
Sbjct: 286 AEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKK 345

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A   ++++      P +V Y  LI GYC +G ++E  +L   M ++G K +V+ Y
Sbjct: 346 GFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTY 405

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S +LS+ CK+G    A  L  +M   G+ PD +TYS LIR LC++ ++  A  L+  M S
Sbjct: 406 STILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMIS 465

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             + P+   + +++ G C++  +  A    D ++ +  + DVV Y+++I+G  K     E
Sbjct: 466 LGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKE 525

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIY---------------GFCKNGKVADARRLLDTIKL 406
           A +L  +L  +   P+ + +++L+                GFC  G + +A ++  +I  
Sbjct: 526 AQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILD 585

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
                    Y+  ++ +C EGN+ + L+  ++M      P   +   +I+GL ++  + E
Sbjct: 586 RNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVE 645

Query: 467 AVQLLEDM 474
           A Q+++ +
Sbjct: 646 ADQVIQQL 653



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 200/395 (50%), Gaps = 36/395 (9%)

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL--------- 283
           G+  +V+AY+ +L ++  +  +  A      M + G+ P++ TY+IL+R L         
Sbjct: 118 GYAPSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 284 --------------------------CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
                                     C+  +V +A +L + M    + PN     +++ G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           +C+   + +AR  FD ++      D V YN ++ GY K+G   EA+ ++ ++  K I P 
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           +VTF SLI+  CK G +  A  L+  ++  GL+ + +T+T  ++ +C++G +   L  ++
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM    I P+ V Y  +I G C   ++ EA +L+ +M   GV PD +TY+TI+ ++CK  
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
           D   AFQL  QM  + + P + TY+ LI  LC    L +A  L  ++    +   +V YT
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           ++I  HC EG+V +A++   +MV+ G    +  Y+
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYS 511



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 193/425 (45%), Gaps = 53/425 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           Y + G  H+A+ V A+M    +   + T+ SL++      + +    L  +++      N
Sbjct: 272 YCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMN 331

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +IDG C++  L DA+L ++E       PSVV  NA+++ YC +G  + A+ L  
Sbjct: 332 EITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVR 391

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G+ PD  +Y+ ++   C  G    A +    M  +GV PDAITYS L +      
Sbjct: 392 EMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEK 451

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A  + + ++  G  PD VTYT LI G+C+ GNVE  L L + M+  G   +V+ YS
Sbjct: 452 RLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYS 511

Query: 243 VLLSSMCKSGRIDEALGLLY------------------------EMEAV----------G 268
           VL++ + KS R  EA  LL+                        E+++V          G
Sbjct: 512 VLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKG 571

Query: 269 L----------------KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           L                  D   YS+LI G C++  V KA+  + +M     +PNS +  
Sbjct: 572 LMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTI 631

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           +++ GL EK M+ EA      L+    + D      +ID  +K GN+   + +   +   
Sbjct: 632 SLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARD 691

Query: 373 RISPS 377
            + PS
Sbjct: 692 GLLPS 696


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 182/641 (28%), Positives = 303/641 (47%), Gaps = 34/641 (5%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIV 69
           G V DA  V A    L    ++ TYN+++        + D    I     P + +T + +
Sbjct: 201 GRVSDAERVFAA---LGPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPL 257

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           I  LC + R+ DA+    +   +   PSVV+ + ++   CK      A  L   M   G 
Sbjct: 258 IRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGC 317

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            PD  +YN+LI+ +C  G ++EAL   +++  HG +PDA+TY+ + K        S  WK
Sbjct: 318 EPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLC----GSERWK 373

Query: 190 VIQKLLIKGSD----PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            +++LL + +     PD VT+  ++   CQ G V+  +++ + M   G   +++ YS +L
Sbjct: 374 EVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSIL 433

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +C  GR+D+A+ LL  +++ G KPD + Y+ +++GLC  ++  +A +L  EM      
Sbjct: 434 DGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCP 493

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+      ++  LC+K ++  A    + +  + C  D+V YN +IDG      I +A++L
Sbjct: 494 PDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMEL 553

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
              L      P IVTFN+L+ G C   +  DA +L+  +      P  +T+ T + + C+
Sbjct: 554 LSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQ 613

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +G + + +  L+ M      P   TY++V+  L K  K Q A++LL  M     TPD IT
Sbjct: 614 KGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM--TNGTPDLIT 671

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YNT+I +  K   + +A  LL  M  + L P + TY  L  G+C       A  +L  +Q
Sbjct: 672 YNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQ 731

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
           +  +S     Y  ++   C +     A+  F  MV                    S+G  
Sbjct: 732 DTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMV--------------------SSGCM 771

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
           PD+    ++L A   GG L     L A +   G+L DK LI
Sbjct: 772 PDESTYVILLEALAYGGLLDEAKRLLASLCSLGVL-DKKLI 811



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 174/594 (29%), Positives = 280/594 (47%), Gaps = 27/594 (4%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPS--VVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           +I+I  LC   R+ DA     E      GPS  VV+ N +++ YC+ G  E A+ L   M
Sbjct: 191 NILIKRLCSDGRVSDA-----ERVFAALGPSATVVTYNTMVNGYCRAGRIEDARRLINGM 245

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
                 PD F++N LI  LC+ G + +AL   +DM   G  P  +TYSIL       S  
Sbjct: 246 ---PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGY 302

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  ++ ++  KG +PDIVTY VLI   C  G+V+E L +   + S G K + + Y+ +
Sbjct: 303 RQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPV 362

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L S+C S R  E   LL EM +    PD VT++ ++  LC+Q  V +AI++ + M     
Sbjct: 363 LKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGC 422

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             +   + +IL GLC+   + +A      L    C  D + Y  ++ G         A +
Sbjct: 423 VADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEE 482

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L  +++     P  VTFN+++   C+ G V  A R+++ +  +G  P  VTY   ++  C
Sbjct: 483 LMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLC 542

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
            E  I   + LL ++++    P  VT+  ++KGLC   + ++A QL+ +M      PD++
Sbjct: 543 NESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDEL 602

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           T+NT+I S C+   L +A + L  M  +   P S+TY+I++D L   G  + A  LL  +
Sbjct: 603 TFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM 662

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG------------FEISIRDYT 592
                 L  + Y T+I      G + +A+     MV  G            + +   D T
Sbjct: 663 TNGTPDL--ITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGT 720

Query: 593 KSFFCMML---SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                M+      G  PD      +L+ F +        +  A M+ SG +PD+
Sbjct: 721 DRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDE 774



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 252/528 (47%), Gaps = 10/528 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y R G + DA  +I  M          T+N L+  L    R  D +  ++DD+       
Sbjct: 229 YCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALA-VFDDMLHRGCSP 284

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T SI++D  C++S  + A+  L E   K   P +V+ N +++  C  G  + A  + 
Sbjct: 285 SVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNIL 344

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +  +G  PDA +Y  ++  LC +   +E  E   +M  +   PD +T++ +       
Sbjct: 345 SNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQ 404

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A +V+  +   G   DIVTY+ ++ G C +G V++ ++L   + S G K + IAY
Sbjct: 405 GLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAY 464

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +L  +C + + + A  L+ EM      PD VT++ ++  LC++  V +AI++  +M  
Sbjct: 465 TTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSE 524

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
              SP+   +  I+ GLC +  I +A      L    C  D+V +N ++ G   +    +
Sbjct: 525 NGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWED 584

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A QL   ++     P  +TFN++I   C+ G +  A   L  +  +G  P++ TY+  ++
Sbjct: 585 AEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVD 644

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           A  + G  Q  L LL  M      P  +TY  VI  L K  K++EA+ LL  M   G+ P
Sbjct: 645 ALLKAGKAQAALELLSGMTNGT--PDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCP 702

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           D  TY ++    C+     +A ++L ++    L P +  YN ++ G C
Sbjct: 703 DTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFC 750



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 187/379 (49%), Gaps = 8/379 (2%)

Query: 215 QIGNVEEGLKLREVMLSQGFK--LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           Q G ++E L L + M S G +    V+  ++L+  +C  GR+ +A  +     A+G    
Sbjct: 162 QRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVF---AALGPSAT 218

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY+ ++ G C+  ++  A +L N M      P++F    ++  LC +  I +A   FD
Sbjct: 219 VVTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALAVFD 275

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            ++   C   VV Y+I++D   K     +A+ L  ++  K   P IVT+N LI   C  G
Sbjct: 276 DMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEG 335

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
            V +A  +L  +  HG +P AVTYT  + + C     + +  LL EM +    P  VT+ 
Sbjct: 336 DVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFN 395

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            ++  LC+Q  +  A+++++ M   G   D +TY++I+   C    +  A +LL+++  +
Sbjct: 396 TIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSY 455

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
             +P +  Y  ++ GLC     + A+ L+  +   +    +V + T++ + C +G V +A
Sbjct: 456 GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRA 515

Query: 573 MTFFCQMVEKGFEISIRDY 591
           +    QM E G    I  Y
Sbjct: 516 IRVVEQMSENGCSPDIVTY 534



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 135/293 (46%), Gaps = 32/293 (10%)

Query: 354 VKLGNIGEAVQLYRQLIEK--RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           V+ G I EA+ L+  +     R  P +V  N LI   C +G+V+DA R+        L P
Sbjct: 161 VQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERV-----FAALGP 215

Query: 412 SA--VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           SA  VTY T +N YC  G I+    L+  M      P   T+  +I+ LC + ++ +A+ 
Sbjct: 216 SATVVTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALA 272

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           + +DM   G +P  +TY+ ++ + CK    R+A  LL++M     EP   TYN+LI+ +C
Sbjct: 273 VFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMC 332

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             GD+  A  +L +L  H      V YT ++K+ C                E+  E+   
Sbjct: 333 NEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGS--------------ERWKEV--- 375

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              +     M SN   PD+     ++ +  Q G +    E+   M + G + D
Sbjct: 376 ---EELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVAD 425


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 180/636 (28%), Positives = 319/636 (50%), Gaps = 27/636 (4%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIK-VSETPRNVYTNS 67
           V +AV +   +   DLK  + TY +L+Y L   +  +I  ++ D++  +  +P     +S
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           +V +GL ++ ++++A+  ++        P++   NA++   CK      A+ LF  M K 
Sbjct: 338 LV-EGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           GL P+  +Y+ILI   C  G ++ AL F  +M   G++     Y+ L  G      IS A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
              + +++ K  +P +VTYT L+ GYC  G + + L+L   M  +G   ++  ++ LLS 
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           + ++G I +A+ L  EM    +KP+ VTY+++I G C++  + KA +   EM  K I P+
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           ++++  ++ GLC     +EA+++ D L   NC  + + Y  ++ G+ + G + EA+ + +
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           +++++ +   +V +  LI G  K+        LL  +   GL+P  V YT+ ++A  + G
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           + +    +   M  +   P  VTYT VI GLCK   + EA  L   M  +   P+Q+TY 
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756

Query: 488 TIIRSFCKCK-DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
             +    K + D++KA +L N + L  L   +ATYN+LI G C  G ++ A  L+  +  
Sbjct: 757 CFLDILTKGEVDMQKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIG 815

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPP 606
             +S   + YTT+I   C   DV KA+  +  M EKG                      P
Sbjct: 816 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR--------------------P 855

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           D+     ++      G++G   EL   M++ GL+P+
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 157/536 (29%), Positives = 270/536 (50%), Gaps = 15/536 (2%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           ++ K  L P+  + + L+HGL        A+E  NDM   G+ PD   Y+ + +    L 
Sbjct: 182 MITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELK 241

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +S A ++I  +   G D +IV Y VLI G C+   V E + +++ +  +  K +V+ Y 
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYC 301

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +CK    +  L ++ EM  +   P     S L+ GL K+ K+ +A+ L   +   
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF 361

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +SPN F + A++  LC+     EA + FD +       + V Y+I+ID + + G +  A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +    ++++  +  S+  +NSLI G CK G ++ A   +  +    LEP+ VTYT+ M  
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC +G I + L L  EM  K I P+  T+T ++ GL +   +++AV+L  +M    V P+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           ++TYN +I  +C+  D+ KAF+ L +M    + P + +Y  LI GLC+ G    A   + 
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY----------- 591
            L + N  L ++ YT ++   C EG + +A++   +MV++G ++ +  Y           
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661

Query: 592 -TKSFFCM---MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
             K FF +   M   G  PD  I   M+ A  + GD    F +  +MI  G +P++
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 239/495 (48%), Gaps = 19/495 (3%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSET----- 59
           ++ R G +  A+  + +M +  LK+S+  YNSL+    H       + DI  +E      
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING--HCK-----FGDISAAEGFMAEM 463

Query: 60  -----PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
                   V T + ++ G C + ++  A+    E  GK   PS+ +   ++S   + G  
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
             A  LF  M ++ + P+  +YN++I G C  G M +A EF  +M   G+ PD  +Y  L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G  L  Q S A   +  L     + + + YT L+ G+C+ G +EE L + + M+ +G 
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
            L+++ Y VL+    K        GLL EM   GLKPD V Y+ +I    K     +A  
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           +++ M ++   PN   + A++ GLC+   + EA +    +   + + + V Y   +D   
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763

Query: 355 KLG-NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           K   ++ +AV+L+  ++ K +  +  T+N LI GFC+ G++ +A  L+  +   G+ P  
Sbjct: 764 KGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           +TYTT +N  C   ++++ + L   M  K I P  V Y  +I G C   ++ +A +L  +
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882

Query: 474 MYVIGVTPDQITYNT 488
           M   G+ P+  T  T
Sbjct: 883 MLRQGLIPNNKTSRT 897



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 250/512 (48%), Gaps = 5/512 (0%)

Query: 13  HDAVFVIAKMKELDLKVSIQTYNSL--LYNLR-HTDIMWDLYDDIKVSETPRNVYTNSIV 69
           H+A  +  +M ++ L+ +  TY+ L  ++  R   D       ++  +    +VY  + +
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           I+G C+   +  A  F+ E   K+  P+VV+  ++M  YC  G    A  L+  M   G+
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P  +++  L+ GL  AG + +A++  N+M    V+P+ +TY+++ +G+     +S A++
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
            ++++  KG  PD  +Y  LI G C  G   E     + +     +LN I Y+ LL   C
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           + G+++EAL +  EM   G+  DLV Y +LI G  K         L  EM  + + P+  
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV 683

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            + +++    +     EA   +D +I   C+ + V Y  +I+G  K G + EA  L  ++
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRL-LDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
                 P+ VT+   +    K G+V   + + L    L GL  +  TY   +  +C +G 
Sbjct: 744 QPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGR 802

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           I+    L+  M    + P  +TYT +I  LC++  +++A++L   M   G+ PD++ YNT
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
           +I   C   ++ KA +L N+M    L P + T
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 208/483 (43%), Gaps = 68/483 (14%)

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV--------------- 274
           L +GF  +  ++ +L+ ++ K+     A  LL  +    LKP  V               
Sbjct: 96  LHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSS 155

Query: 275 --TYSILIRGLCKQDKVHKAI------------------------------------QLY 296
             ++ +LI+   +  +V   +                                    +L+
Sbjct: 156 SSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELF 215

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           N+M S  I P+ + +  ++  LCE + ++ A+     +  + C  ++V YN++IDG  K 
Sbjct: 216 NDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK 275

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             + EAV + + L  K + P +VT+ +L+YG CK  +      ++D +      PS    
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           ++ +    + G I+  L L++ +    + P    Y  +I  LCK  K  EA  L + M  
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
           IG+ P+ +TY+ +I  FC+   L  A   L +M    L+ +   YN LI+G C  GD+  
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--- 593
           A+  +  +    +  T V YT+++  +C++G ++KA+  + +M  KG   SI  +T    
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515

Query: 594 ------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                         F  M      P++    VM+  + + GD+   FE    M + G++P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575

Query: 642 DKF 644
           D +
Sbjct: 576 DTY 578


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 161/525 (30%), Positives = 275/525 (52%), Gaps = 5/525 (0%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + VI+GLC+  RL +A    +E  G E  P+ V+ +A++  +CK G  E   GL   M K
Sbjct: 168 NTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEK 227

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL  D F Y+ LI G C  G +E   E  N+M R  V P+ +TYS L        +   
Sbjct: 228 MGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKE 287

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +++  +      PD+V YTVL  G  + G   + +K+ ++M+ +G + N + Y+ +++
Sbjct: 288 AAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIIN 347

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR--I 304
            +CK GR+D+ALG+L  M   G KPD+VTYS L++GLC   K+ +A+ L N + SK   I
Sbjct: 348 GLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHI 407

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+ FA   ++  LC++  +  A+  + +++      ++V YNI+IDGY+  G + +A++
Sbjct: 408 KPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALE 467

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L++  ++  ISP+  T+  LI G CK   ++ A+ L +  +  G  P+   Y T M + C
Sbjct: 468 LWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLC 527

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
            E ++++   L QEM      P  V++ ++I G  K   ++ A +LL +M  + + PD I
Sbjct: 528 RESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNI 587

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           T++ +I  F K   L +A  L  +M      P +  ++ L+ G  + G  +    +L  +
Sbjct: 588 TFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQM 647

Query: 545 QEHNISLTKVAYTTIIKAHC---AEGDVHKAMTFFCQMVEKGFEI 586
            + ++ L     +TI+   C    + D+ K +  F Q    G  I
Sbjct: 648 ADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQHTSVGASI 692



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 166/568 (29%), Positives = 284/568 (50%), Gaps = 12/568 (2%)

Query: 26  DLKVSIQTY---NSLLYNLR---HTDIMWDLYDDI-KVSETPRNVYTN-SIVIDGLCQQS 77
           D   SI +Y   N+L+ NLR   H D +  ++  +  VS  P   +T+ S +I+      
Sbjct: 51  DYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFP--CFTSLSALIESFVNTQ 108

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +   A   L     + F  +V + N ++  +C+ G +  A  LFC+M +  L PD  SYN
Sbjct: 109 KPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYN 168

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
            +I+GLC    + EA E   +M     +P+++T+S L  GF     +   + +++++   
Sbjct: 169 TVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKM 228

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G + D+  Y+ LI G+C  G++E G +L   ML +    NV+ YS L++++CK  +  EA
Sbjct: 229 GLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEA 288

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             +L  M    ++PD+V Y++L  GL K  +   AI++ + M  +   PN+  + AI+ G
Sbjct: 289 AQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIING 348

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR--IS 375
           LC++  + +A    +++       DVV Y+ ++ G   +G I EAV L   L+ K   I 
Sbjct: 349 LCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIK 408

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P +  FN +I   CK  ++  A+R+  T+   G   + VTY   ++ Y   G + + L L
Sbjct: 409 PDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALEL 468

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
            ++     I P   TYTV+I GLCK   L  A  L       G  P    YNT++ S C+
Sbjct: 469 WKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCR 528

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              + +A  L  +M   N +P   ++NI+IDG    GD+++A  LL+ +   N+    + 
Sbjct: 529 ESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNIT 588

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           ++ +I      G + +A + + +MV  G
Sbjct: 589 FSILINRFLKLGQLDEAASLYERMVSCG 616



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 165/609 (27%), Positives = 272/609 (44%), Gaps = 60/609 (9%)

Query: 64  YTNSI--------VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
           Y NSI        +ID L +       I    + A     P   SL+A++  +       
Sbjct: 52  YPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPS 111

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            A G+  L++K G H + +++N+L+ G C +G   +A++    M R+             
Sbjct: 112 FAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRN------------- 158

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                              LI    PD V+Y  +I G C+   + E  +L + M     K
Sbjct: 159 ------------------CLI----PDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECK 196

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            N + +S L+   CK+G ++E  GLL EME +GL+ D+  YS LI G C +  + +  +L
Sbjct: 197 PNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKEL 256

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +NEM  K ++PN   +  ++  LC+K+   EA    D++       DVV Y ++ DG  K
Sbjct: 257 FNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSK 316

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G   +A+++   ++++   P+ VT+N++I G CK G+V DA  +L+T+   G +P  VT
Sbjct: 317 NGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVT 376

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKA--IGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           Y+T +   C  G I   + LL  + +K   I P    + +VI+ LCKQ +L+ A ++   
Sbjct: 377 YSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYT 436

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G   + +TYN +I  +     L KA +L        + P +ATY +LI+GLC    
Sbjct: 437 MVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQM 496

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT- 592
           L  A  L    +      T   Y T++ + C E  V +A   F +M     +  +  +  
Sbjct: 497 LSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNI 556

Query: 593 --------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
                         K     ML+    PD     +++  F + G L     L   M+  G
Sbjct: 557 IIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCG 616

Query: 639 LLPDKFLIN 647
            +PD  L +
Sbjct: 617 HVPDAVLFD 625



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 263/525 (50%), Gaps = 25/525 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMW--DLYDDIKVSETPRN 62
           + + G V +   ++ +M+++ L+  +  Y++L+       DI    +L++++       N
Sbjct: 209 FCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPN 268

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T S +++ LC++ + ++A   L    G +  P VV+   +     K G A  A  +  
Sbjct: 269 VVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLD 328

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           LM+K G  P+  +YN +I+GLC  G +++AL     M + G +PD +TYS L KG   + 
Sbjct: 329 LMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVG 388

Query: 183 QISGAWKVIQKLLIKGS--DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +I  A  ++  L+ K     PD+  + ++I   C+   +    ++   M+ +GF  N++ 
Sbjct: 389 KIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVT 448

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y++L+     +G++ +AL L  +    G+ P+  TY++LI GLCK   +  A  L+N+  
Sbjct: 449 YNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKR 508

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +    P    +  ++  LC +  + +AR  F  +  +N   DVV +NI+IDG +K G++ 
Sbjct: 509 ASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVE 568

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A +L  +++   + P  +TF+ LI  F K G++ +A  L + +   G  P AV + + +
Sbjct: 569 SAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLL 628

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             Y  +G  ++++++LQ+M  K +       + ++  LC   K         D+ +  + 
Sbjct: 629 KGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSK---------DVDIEKIL 679

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           P + + +T + +  KC +L         M L+ + P +A  NIL+
Sbjct: 680 P-KFSQHTSVGASIKCNEL--------LMKLNKVHPDNA--NILV 713



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 187/409 (45%), Gaps = 34/409 (8%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           +LA   S+ G   DA+ V+                         D+M      +K  E P
Sbjct: 309 VLADGLSKNGRASDAIKVL-------------------------DLM------VKRGEEP 337

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            NV  N+I I+GLC++ R+ DA+  L+  A K   P VV+ + ++   C +G  + A  L
Sbjct: 338 NNVTYNAI-INGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDL 396

Query: 121 FCLMLKYGLH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             L++    H  PD F++N++I  LC    +  A      M   G   + +TY+IL  G+
Sbjct: 397 LNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGY 456

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               +++ A ++ +  +  G  P+  TYTVLI G C++  +     L     + G +  V
Sbjct: 457 LSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTV 516

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+ L++S+C+   +++A  L  EM      PD+V+++I+I G  K   V  A +L  E
Sbjct: 517 SEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLE 576

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M +  + P++     ++    +   + EA   ++ ++    + D VL++ ++ GY   G 
Sbjct: 577 MLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGK 636

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
             + V + +Q+ +K +       ++++   C   K  D  ++L     H
Sbjct: 637 TEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQH 685


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  278 bits (710), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 192/620 (30%), Positives = 309/620 (49%), Gaps = 37/620 (5%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWD---LYDDIKVS 57
            Y +    H A  +  KMK L+ + ++ T N+L+ +L      + I+     L D IK+ 
Sbjct: 149 AYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLG 208

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAE 115
             P N  + +I+I G C +S+++DA+ ++ + +  EFG  P  VS N I+    K    +
Sbjct: 209 VVP-NTNSFNILIYGYCLESKVKDALDWVNKMS--EFGCVPDTVSYNTILDALLKRRLLQ 265

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            A+ L   M   GL P+  +YN+L+ G C  G ++EA +    M R+ + P   TY++L 
Sbjct: 266 EARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLV 325

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            GF    +I  A+++  ++      PD+VTY  LI G  Q  +  E   L E M  +G K
Sbjct: 326 NGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVK 385

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            N + Y+++L  MCK G + EA   L +ME  GL PD VTY+ LI   CK  K+ KA ++
Sbjct: 386 CNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRM 445

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
            +EM SK +  +++    IL  LC ++ + EA     S      I D V Y I+I GY K
Sbjct: 446 MDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFK 505

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
                 A+ L+ ++ E++I PS +T+NS+I G C++ KV  A   L+ +  +GL P   T
Sbjct: 506 DEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETT 565

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y   ++ +C EGN+++      EM      P   T  ++++GLC++  L++A++L   + 
Sbjct: 566 YNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLV 625

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G   D +TYNTII S CK      A+ LL +M    L P   TY ++I  L   G +K
Sbjct: 626 SKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIK 685

Query: 536 NADCLLVSLQE------HNISLTK-----------------VAYTTIIKAHCAEGDVHKA 572
            A+   + + E       N+ L K                 +AY+  I   C +     A
Sbjct: 686 EAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDA 745

Query: 573 MTFFCQMVEKGFEISIRDYT 592
           M  F ++ ++G  +++  YT
Sbjct: 746 MHLFVEVTKEG--VALNKYT 763



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 165/555 (29%), Positives = 273/555 (49%), Gaps = 23/555 (4%)

Query: 94  FGPSVVSLNAIMS---RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
           + P++++ N +M+   RY       +A+ +    +K G+ P+  S+NILI+G C+   ++
Sbjct: 171 YRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVK 230

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           +AL++ N M   G  PD ++Y+ +         +  A  ++  +  KG  P+  TY +L+
Sbjct: 231 DALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLV 290

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
           CGYC++G ++E  K+ E+M        V  Y++L++  C  G+IDEA  +  EME + + 
Sbjct: 291 CGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVL 350

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD+VTY+ LI G  +     +   L  EM  K +  N+  +  IL  +C+K  +TEA   
Sbjct: 351 PDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTT 410

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            D +  +    D V YN +I  Y K G +G+A ++  ++  K +     T N++++  C 
Sbjct: 411 LDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCV 470

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
             K+ +A  LL +    G     V+Y   +  Y ++    R L L  EM+ + I P+ +T
Sbjct: 471 EKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTIT 530

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  VI GLC+  K+ +A+  L +M   G+ PD+ TYN II  FC   ++ KAFQ  N+M 
Sbjct: 531 YNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMI 590

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
            +  +P   T NIL+ GLC  G L+ A  L  +L      +  V Y TII + C EG   
Sbjct: 591 ENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFE 650

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
            A     +M  K                       PDQ   +V++ A    G +    E 
Sbjct: 651 NAYDLLTEMEAKKL--------------------GPDQYTYKVIIAALTDAGRIKEAEEF 690

Query: 631 AAVMIKSGLLPDKFL 645
              M++SG++ D+ L
Sbjct: 691 TLKMVESGIVHDQNL 705



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/565 (27%), Positives = 271/565 (47%), Gaps = 15/565 (2%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYD---DIKVS 57
           +L + Y     V DA+  + KM E        +YN++L  L    ++ +  D   D+K  
Sbjct: 218 ILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSK 277

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               N +T ++++ G C+   L++A   ++        P+V + N +++ +C  G  + A
Sbjct: 278 GLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEA 337

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             +   M K  + PD  +YN LI G        E      +M + GV+ +A+TY+I+ K 
Sbjct: 338 FRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKW 397

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                 ++ A   + K+   G  PD VTY  LI  YC+ G + +  ++ + M S+G K++
Sbjct: 398 MCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKID 457

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
               + +L  +C   ++DEA  LL      G   D V+Y ILI G  K +K  +A+ L++
Sbjct: 458 TWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWD 517

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  ++I P++  + +++ GLC+   + +A    + ++ +  + D   YNI+I G+   G
Sbjct: 518 EMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEG 577

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N+ +A Q + ++IE    P + T N L+ G C+ G +  A +L +T+   G +   VTY 
Sbjct: 578 NVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYN 637

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T +++ C+EG  +    LL EME K +GP   TY V+I  L    +++EA +    M   
Sbjct: 638 TIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVES 697

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+  DQ               L K   +L      + +  S  Y+  I+ LC     K+A
Sbjct: 698 GIVHDQNL------------KLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDA 745

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKA 562
             L V + +  ++L K  Y  +++ 
Sbjct: 746 MHLFVEVTKEGVALNKYTYLNLMEG 770



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 225/456 (49%), Gaps = 18/456 (3%)

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK---SGRIDEALGLLYEMEA 266
           I  Y Q+       ++   M    ++ N++  + L++S+ +   S  I  A  +L +   
Sbjct: 147 IGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIK 206

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           +G+ P+  +++ILI G C + KV  A+   N+M      P++ ++  IL  L ++ ++ E
Sbjct: 207 LGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQE 266

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           AR     +       +   YN+++ GY +LG + EA ++   +    + P++ T+N L+ 
Sbjct: 267 ARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVN 326

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           GFC +GK+ +A R+ D ++   + P  VTY T ++   +  +   + +L++EM+ K +  
Sbjct: 327 GFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKC 386

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             VTY +++K +CK+  + EA   L+ M   G++PD +TYNT+I ++CK   + KAF+++
Sbjct: 387 NAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMM 446

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           ++M    L+  + T N ++  LCV   L  A  LL S  +    L +V+Y  +I  +  +
Sbjct: 447 DEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKD 506

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSF--FCM-------------MLSNGFPPDQEIC 611
               +A+  + +M E+    S   Y       C              ML NG  PD+   
Sbjct: 507 EKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTY 566

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            +++  F   G++   F+    MI++   PD +  N
Sbjct: 567 NIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCN 602



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 157/347 (45%), Gaps = 26/347 (7%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
            Y + G +  A  ++ +M    LK+   T N++L+ L   +  D  ++L           
Sbjct: 432 AYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYIL 491

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +  +  I+I G  +  +   A+    E   ++  PS ++ N+++   C+    + A    
Sbjct: 492 DEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKL 551

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML+ GL PD  +YNI+IHG C+ G++E+A +F N+M  +  +PD  T +IL +G    
Sbjct: 552 NEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCRE 611

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A K+   L+ KG D D+VTY  +I   C+ G  E    L   M ++    +   Y
Sbjct: 612 GMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTY 671

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL-----------------------VTYSI 278
            V+++++  +GRI EA     +M   G+  D                        + YS 
Sbjct: 672 KVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSD 731

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
            I  LC Q K   A+ L+ E+  + ++ N + +  ++ GL ++   T
Sbjct: 732 QINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKST 778


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 181/648 (27%), Positives = 304/648 (46%), Gaps = 72/648 (11%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVY 64
           R G    A+  + K+     K +++ YN+++  L    ++   + L+ ++ V     NV 
Sbjct: 110 RIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVV 169

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S +I G C   +L++A+  L     K   P+V + N ++   CK G  + AK +  +M
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVM 229

Query: 125 LK-----------------------------------YGLHPDAFSYNILIHGLCIAGSM 149
           LK                                    G+ PD  SYNI+I+G C    +
Sbjct: 230 LKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRV 289

Query: 150 EEALEFTNDM--------------------GRH--------------GVEPDAITYSILA 175
           ++AL    +M                     +H              G++PD  T +IL 
Sbjct: 290 DKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILI 349

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
             F  + QI+  + V+ K+L +G  P  VT   LI G C  G V++ L   + +L+QGF+
Sbjct: 350 NCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 409

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           LN ++Y+ L++ +CK G    A+ LL +++    KP++  YS +I  LCK   V +A  L
Sbjct: 410 LNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGL 469

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           ++EM  K IS +   +  ++ G C    + EA    + +++     DV  Y I++D   K
Sbjct: 470 FSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGK 529

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G + EA  +   +++  + P + T+N+L+ G+    +V  A+ + + + L G+ P   T
Sbjct: 530 EGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHT 589

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           YT  +N +C+   +   L L +EM  K + P  VTY+ ++ GLCK  ++     L+++M 
Sbjct: 590 YTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMR 649

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G   D ITYN++I   CK   L KA  L N+M    + P + T+ IL+DGLC  G LK
Sbjct: 650 DRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLK 709

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +A  +   L      L    Y  +I  HC +G + +A+T   +M E G
Sbjct: 710 DAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENG 757



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 164/584 (28%), Positives = 288/584 (49%), Gaps = 12/584 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL------YNLRHTDIMWDLYDDIKVSETPR 61
           + G V +A  V+A M +  +K ++ TY++L+      Y ++    +++    + V  TP 
Sbjct: 215 KEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV--TP- 271

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V++ +I+I+G C+  R+  A+   +E     F P ++  N I+  + K+     A  L 
Sbjct: 272 DVHSYNIMINGFCKIKRVDKALNLFKEMILSRF-PPIIQFNKILDSFAKMKHYSTAVSLS 330

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +   G+ PD F+ NILI+  C  G +         + + G  P  +T + L KG  L 
Sbjct: 331 HRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLK 390

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            Q+  A     KLL +G   + V+Y  LI G C+IG+    +KL   +  +  K NV  Y
Sbjct: 391 GQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMY 450

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S ++ ++CK   + EA GL  EM   G+  D+VTYS LI G C   K+ +AI L NEM  
Sbjct: 451 STIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVL 510

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIG 360
           K I+P+   +  ++  L ++  + EA+    ++++  C++ DV  YN +++GY+ +  + 
Sbjct: 511 KTINPDVRTYTILVDALGKEGKVKEAKSVL-AVMLKACVKPDVFTYNTLMNGYLLVYEVK 569

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  ++  +    ++P + T+  LI GFCK+  V +A  L   +    + P  VTY++ +
Sbjct: 570 KAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLV 629

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C+ G I  +  L+ EM  +      +TY  +I GLCK   L +A+ L   M   G+ 
Sbjct: 630 DGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIR 689

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+  T+  ++   CK   L+ A ++   +           YN++I G C  G L+ A  +
Sbjct: 690 PNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTM 749

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           L  ++E+      V +  II A   + +  KA     QM+ +G 
Sbjct: 750 LSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 157/601 (26%), Positives = 289/601 (48%), Gaps = 16/601 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   + +ID LC+   + +A     E   K    +VV+ + ++  +C +G  + A GL 
Sbjct: 132 NVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLL 191

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M+   ++P+  +YNIL+  LC  G ++EA      M +  V+ + ITYS L  G+ L+
Sbjct: 192 NVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLV 251

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  V   + + G  PD+ +Y ++I G+C+I  V++ L L + M+   F   +I +
Sbjct: 252 YEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFP-PIIQF 310

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +L S  K      A+ L + +E  G++PDL T +ILI   C   ++     +  ++  
Sbjct: 311 NKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILK 370

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +   P++     ++ GLC K  + +A  + D L+      + V Y  +I+G  K+G+   
Sbjct: 371 RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 430

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A++L R++  +   P++  ++++I   CK   V++A  L   + + G+    VTY+T + 
Sbjct: 431 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 490

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C  G ++  + LL EM  K I P   TYT+++  L K+ K++EA  +L  M    V P
Sbjct: 491 GFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP 550

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D  TYNT++  +    +++KA  + N M L  + P   TY ILI+G C +  +  A  L 
Sbjct: 551 DVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLF 610

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK-------- 593
             + + N+    V Y++++   C  G +        +M ++G    +  Y          
Sbjct: 611 KEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKN 670

Query: 594 -------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
                  + F  M   G  P+     ++L    +GG L    E+   ++  G   D ++ 
Sbjct: 671 GHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIY 730

Query: 647 N 647
           N
Sbjct: 731 N 731



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 169/666 (25%), Positives = 302/666 (45%), Gaps = 86/666 (12%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  + + +I+G+C+    + AI FL++  G+   P+V   N I+   CK      A GLF
Sbjct: 97  NQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLF 156

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP--------------- 166
             M   G+  +  +Y+ LI+G CI G ++EAL   N M    + P               
Sbjct: 157 SEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKE 216

Query: 167 --------------------DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
                               + ITYS L  G+ L+ ++  A  V   + + G  PD+ +Y
Sbjct: 217 GKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSY 276

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            ++I G+C+I  V++ L L + M+   F   +I ++ +L S  K      A+ L + +E 
Sbjct: 277 NIMINGFCKIKRVDKALNLFKEMILSRFP-PIIQFNKILDSFAKMKHYSTAVSLSHRLEL 335

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G++PDL T +ILI   C   ++     +  ++  +   P++     ++ GLC K  + +
Sbjct: 336 KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKK 395

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN---------------------------- 358
           A  + D L+      + V Y  +I+G  K+G+                            
Sbjct: 396 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 455

Query: 359 -------IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
                  + EA  L+ ++  K IS  +VT+++LIYGFC  GK+ +A  LL+ + L  + P
Sbjct: 456 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINP 515

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
              TYT  ++A  +EG ++   ++L  M    + P   TY  ++ G    +++++A  + 
Sbjct: 516 DVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVF 575

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
             M ++GVTPD  TY  +I  FCK K + +A  L  +M   N+ P + TY+ L+DGLC +
Sbjct: 576 NAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKS 635

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           G +     L+  +++       + Y ++I   C  G + KA+  F +M ++G   +   +
Sbjct: 636 GRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTF 695

Query: 592 T---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           T               +  F  +L+ G+  D  I  VM+    + G L     + + M +
Sbjct: 696 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEE 755

Query: 637 SGLLPD 642
           +G +P+
Sbjct: 756 NGCIPN 761



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 268/555 (48%), Gaps = 7/555 (1%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P +  T + +I GLC + ++++A+ F  +   + F  + VS   +++  C++G    A  
Sbjct: 60  PPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIK 119

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
               +      P+   YN +I  LC    + EA    ++M   G+  + +TYS L  GF 
Sbjct: 120 FLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFC 179

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           ++ ++  A  ++  +++K  +P++ TY +L+   C+ G V+E   +  VML    K NVI
Sbjct: 180 IVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVI 239

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            YS L+        + +A  +   M  +G+ PD+ +Y+I+I G CK  +V KA+ L+ EM
Sbjct: 240 TYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM 299

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
              R  P       IL    + +  + A      L +     D+   NI+I+ +  +G I
Sbjct: 300 ILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQI 358

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
                +  +++++   PS VT N+LI G C  G+V  A    D +   G + + V+Y T 
Sbjct: 359 TFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATL 418

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N  C+ G+ +  + LL++++ +   P    Y+ +I  LCK   + EA  L  +M V G+
Sbjct: 419 INGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGI 478

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           + D +TY+T+I  FC    L++A  LLN+M L  + P   TY IL+D L   G +K A  
Sbjct: 479 SADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKS 538

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           +L  + +  +      Y T++  +    +V KA   F  M   G    +  YT      +
Sbjct: 539 VLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYT------I 592

Query: 600 LSNGFPPDQEICEVM 614
           L NGF   + + E +
Sbjct: 593 LINGFCKSKMVDEAL 607



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 255/524 (48%), Gaps = 21/524 (4%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +LK G  PD  + N LI GLC+ G ++EAL F + +   G + + ++Y+ L  G   +  
Sbjct: 54  ILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGD 113

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A K ++K+  + + P++  Y  +I   C+   V E   L   M  +G   NV+ YS 
Sbjct: 114 TRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYST 173

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+   C  G++ EALGLL  M    + P++ TY+IL+  LCK+ KV +A  +   M    
Sbjct: 174 LIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKAC 233

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           +  N   +  ++ G      + +A+  F+++ +     DV  YNIMI+G+ K+  + +A+
Sbjct: 234 VKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKAL 293

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L++++I  R  P I+ FN ++  F K    + A  L   ++L G++P   T    +N +
Sbjct: 294 NLFKEMILSRF-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCF 352

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C  G I    ++L ++  +   P+ VT   +IKGLC + ++++A+   + +   G   +Q
Sbjct: 353 CHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQ 412

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           ++Y T+I   CK  D R A +LL ++     +P    Y+ +ID LC    +  A  L   
Sbjct: 413 VSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSE 472

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           +    IS   V Y+T+I   C  G + +A+    +MV K     +R YT           
Sbjct: 473 MTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYT----------- 521

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                    +++ A  + G +     + AVM+K+ + PD F  N
Sbjct: 522 ---------ILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYN 556



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 213/442 (48%), Gaps = 3/442 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           +   G +     V+AK+ +     S  T N+L+  L            +D +       N
Sbjct: 352 FCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLN 411

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             + + +I+G+C+    + AI  L++  G+   P+V   + I+   CK      A GLF 
Sbjct: 412 QVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFS 471

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G+  D  +Y+ LI+G CI G ++EA+   N+M    + PD  TY+IL        
Sbjct: 472 EMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEG 531

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A  V+  +L     PD+ TY  L+ GY  +  V++   +   M   G   +V  Y+
Sbjct: 532 KVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYT 591

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L++  CKS  +DEAL L  EM    + PD VTYS L+ GLCK  ++     L +EM  +
Sbjct: 592 ILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDR 651

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
               +   + +++ GLC+   + +A   F+ +       +   + I++DG  K G + +A
Sbjct: 652 GQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDA 711

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            ++++ L+ K     +  +N +IYG CK G + +A  +L  ++ +G  P+AVT+   +NA
Sbjct: 712 QEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINA 771

Query: 423 YCEEGNIQRLLALLQEMETKAI 444
             ++    +   LL++M  + +
Sbjct: 772 LFKKDENDKAEKLLRQMIARGL 793


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 167/592 (28%), Positives = 273/592 (46%), Gaps = 62/592 (10%)

Query: 56  VSETPRNVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           V  + R+V   +IV+  LC+      A+ +F  E A     P++V+ N I++  CK    
Sbjct: 38  VRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNEL 97

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
                LF  ++K G HPD  +YN LI  LC AG +EEA      M   G  P+ +TYS+L
Sbjct: 98  GAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVL 157

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSD--PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
             G   + +I  A ++IQ++  K  D  P+I+TY   + G C+     E  +L   +   
Sbjct: 158 INGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDG 217

Query: 233 GFKL--NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
             ++  + + +S L+  +CK G+ DEA     +M A G  P++VTY+ L+ GLCK DK+ 
Sbjct: 218 SLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKME 275

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A  +   M  K ++P+   +  ++   C+   + EA      +    C  +VV +N +I
Sbjct: 276 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 335

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           DG  K    GEA Q+  Q+  + + P  VTFN LI G CK G    A  L + +    ++
Sbjct: 336 DGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQ 395

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P  +T+   ++  C+ G ++    +L  M    + P  VTY V++ GLCK  +++E  + 
Sbjct: 396 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEF 455

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           LE+M   G  P+ +TY +++ + C+      A QL++++     +P + TYNIL+DGL  
Sbjct: 456 LEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGL-- 513

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
                                               G   +A+T   +MV KG +     
Sbjct: 514 ---------------------------------WKSGKTEQAITVLEEMVGKGHQ----- 535

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                          PD           H+ G+L    EL  V++  G+LPD
Sbjct: 536 ---------------PDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPD 572



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 241/503 (47%), Gaps = 41/503 (8%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T + +I+GLC+ + L   +   +E   +   P VV+ N ++   CK G  E A+ L  
Sbjct: 81  IVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHG 140

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG------------------- 163
            M   G  P+  +Y++LI+GLC  G ++EA E   +M R                     
Sbjct: 141 GMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCK 200

Query: 164 --------------------VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
                               V PD +T+S L  G     Q   A      ++  G  P++
Sbjct: 201 QSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNV 258

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           VTY  L+ G C+   +E    + E M+ +G   +VI YSVL+ + CK+ R+DEAL LL+ 
Sbjct: 259 VTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHG 318

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M + G  P++VT++ +I GLCK D+  +A Q+  ++ ++ + P+      ++ G C+   
Sbjct: 319 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGN 378

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
             +A   F+ ++  N   DV+ +  +IDG  K G +  A  +   +    + P++VT+N 
Sbjct: 379 FEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L++G CK+G++ +    L+ +   G  P ++TY + + A C        L L+ ++++  
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             P  VTY +++ GL K  K ++A+ +LE+M   G  PD  T+        +  +L    
Sbjct: 499 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTM 558

Query: 504 QLLNQMWLHNLEPTSATYNILID 526
           +LL  +    + P + T + ++D
Sbjct: 559 ELLRVVLAKGMLPDATTCSSILD 581



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/529 (28%), Positives = 242/529 (45%), Gaps = 57/529 (10%)

Query: 136 YNILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           YNI++  LC AG    ALE F  +M R GV P                            
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPT--------------------------- 80

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
                   IVTY  +I G C+   +  G++L E ++ +G   +V+ Y+ L+ S+CK+G +
Sbjct: 81  --------IVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDL 132

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR--ISPNSFAHG 312
           +EA  L   M + G  P++VTYS+LI GLCK  ++ +A +L  EM  K   + PN   + 
Sbjct: 133 EEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYN 192

Query: 313 AILLGLCEKEMITEARMYFDSLIMSN--CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + L GLC++ M  EA     SL   +     D V ++ +IDG  K G   EA      +I
Sbjct: 193 SFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMI 250

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
                P++VT+N+L+ G CK  K+  A  +++++   G+ P  +TY+  ++A+C+   + 
Sbjct: 251 AGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVD 310

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             L LL  M ++   P  VT+  +I GLCK  +  EA Q+   +Y   + PD++T+N +I
Sbjct: 311 EALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILI 370

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CK  +  +A  L  +M   N++P   T+  LIDGLC  G ++ A  +L  +    + 
Sbjct: 371 AGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP 430

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF---------------EISIRDYTKSF 595
              V Y  ++   C  G + +   F  +MV  G                  S  D     
Sbjct: 431 PNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQL 490

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
              + S G+ PD     +++    + G       +   M+  G  PD F
Sbjct: 491 VSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSF 539



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 237/467 (50%), Gaps = 9/467 (1%)

Query: 31  IQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           + TYN+L+ +L     + +   L+  +       NV T S++I+GLC+  R+ +A   +Q
Sbjct: 116 VVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQ 175

Query: 88  ETAGK--EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH--PDAFSYNILIHGL 143
           E   K  +  P++++ N+ +   CK      A  L   +    L   PD  +++ LI GL
Sbjct: 176 EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 235

Query: 144 CIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
           C  G  +EA    +DM   G  P+ +TY+ L  G     ++  A  +I+ ++ KG  PD+
Sbjct: 236 CKCGQTDEAC--NDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDV 293

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           +TY+VL+  +C+   V+E L+L   M S+G   NV+ ++ ++  +CKS R  EA  +  +
Sbjct: 294 ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQ 353

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           +    L PD VT++ILI G CK     +A  L+ EM +K + P+    GA++ GLC+   
Sbjct: 354 VYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQ 413

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           +  AR   D +       +VV YN+++ G  K G I E  +   +++     P  +T+ S
Sbjct: 414 VEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGS 473

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L+Y  C+  +  DA +L+  +K  G +P  VTY   ++   + G  ++ + +L+EM  K 
Sbjct: 474 LVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKG 533

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             P   T+     GL +   L   ++LL  +   G+ PD  T ++I+
Sbjct: 534 HQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 149/461 (32%), Positives = 244/461 (52%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M +  + PD++SY ILI GL  AG + +A +    +   GV P  + Y+ L  G  + + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A ++   +  +G  P  VTY V+I   C+ G +EE   L + M+  G   +V+ Y+ 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++  +CKSGR++EAL L  EME +G  P+  +++ +I GLC+Q K+ +A Q+++EM ++ 
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I P+S+++G ++ GL +   + EA   F  ++ S      V YN++I G      + EA+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L++ +  K   PS  TFN LI   CK GK+ +A RLL  +   G  P  VTY+T ++  
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C    +     LL++M  +   PT VT   +I GLCK  +++EA ++L+ M   G +PD 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TYNT++   C+     +A +LL+ M    L P   TY  L+ GLC    L  A  +   
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           ++    +     YT +I   C+ G V   +  F +MV  G 
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGI 461



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 163/558 (29%), Positives = 263/558 (47%), Gaps = 20/558 (3%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           +   P   S   ++    K G    A+ LF  +L  G+ P   +Y  LIHGLC+A S ++
Sbjct: 4   RNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 63

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A E   DM R G  P  +TY+++         +  A  +I+K++  G  PD+VTY  ++ 
Sbjct: 64  ARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           G C+ G VEE L L   M   G   N  +++ ++  +C+  +ID+A  + +EMEA  + P
Sbjct: 124 GLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPP 183

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D  +Y ILI GL K  K+++A +L+  M    I+P++  +  ++ G+C    + EA   F
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
            S+    C      +NI+ID + K G + EA +L +++ +    P +VT+++LI G C  
Sbjct: 244 KSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 303

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
            +V DAR LL+ +     +P+ VT  T ++  C+ G I+    +L  M +    P  VTY
Sbjct: 304 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             ++ G C+  + + A +LL DM   G+ P+ +TY  ++   CK   L +A  +  QM  
Sbjct: 364 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 423

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
               P   TY  LI G C  G +     L   +    IS   V Y T+    C  G   +
Sbjct: 424 SGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 483

Query: 572 AMTFFCQMVEK------GFEI------SIRDYTK-----SFFCMMLSNGFPPDQEICEVM 614
           A+    +  E       G E+       + D  K      F   M+  G  P  E C  +
Sbjct: 484 ALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASL 543

Query: 615 LIAF---HQGGDLGSVFE 629
           +       QGG+  +V E
Sbjct: 544 VAGLCKSGQGGEARAVLE 561



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 240/484 (49%), Gaps = 20/484 (4%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M    V PD+ +Y IL  G     +++ A  + QKLL  G  P  V YT LI G C   +
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
            ++  +L   M  +G   + + Y+V++ + CK G ++EA  L+ +M   G  PD+VTY+ 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           ++ GLCK  +V +A+ L+NEM     +PN  +H  I+LGLC++  I +A   F  +   +
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              D   Y I+IDG  K G + EA +L+R++++  I+PS VT+N +I+G C    + +A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            L  +++  G  PS  T+   ++A+C+ G +     LL+ M      P  VTY+ +I GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           C   ++ +A  LLEDM      P  +T NT+I   CK   +++A ++L+ M      P  
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TYN L+ G C  G  + A  LL  +    ++   V YT ++   C    + +A   F Q
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
           M   G   ++  YT                     +++ F   G +    +L   M+ +G
Sbjct: 421 MKSSGCAPNLFTYT--------------------ALILGFCSAGQVDGGLKLFGEMVCAG 460

Query: 639 LLPD 642
           + PD
Sbjct: 461 ISPD 464



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 151/548 (27%), Positives = 256/548 (46%), Gaps = 3/548 (0%)

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           TP  V   S+ I GLC  +   DA     +   +   PS V+ N I+   CK G  E A 
Sbjct: 42  TPSTVAYTSL-IHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEAC 100

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M++ G  PD  +YN ++ GLC +G +EEAL   N+M R G  P+  +++ +  G 
Sbjct: 101 DLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGL 160

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
              S+I  A +V  ++  +   PD  +Y +LI G  + G + E  KL   ML  G   + 
Sbjct: 161 CQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSA 220

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y+V++  MC +  +DEAL L   M + G +P   T++ILI   CK+ K+ +A +L   
Sbjct: 221 VTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKR 280

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M      P+   +  ++ GLC    + +AR   + ++   C   VV  N +I G  K G 
Sbjct: 281 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR 340

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I EA ++   ++    SP +VT+N+L++G C+ G+   AR LL  +   GL P+ VTYT 
Sbjct: 341 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 400

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++  C+   +     +  +M++    P   TYT +I G C   ++   ++L  +M   G
Sbjct: 401 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 460

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW--LHNLEPTSATYNILIDGLCVNGDLKN 536
           ++PD + Y T+    CK     +A ++L +    L +       Y   +DGL   G ++ 
Sbjct: 461 ISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEM 520

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFF 596
           A   +  +             +++   C  G   +A     ++++  +    R     F 
Sbjct: 521 ALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAAKFV 580

Query: 597 CMMLSNGF 604
             M+  G+
Sbjct: 581 EEMVGKGY 588



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 243/473 (51%), Gaps = 7/473 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDI-KVSETPRNV 63
           + GM+ +A  +I KM E      + TYN+++  L  +  + +   L++++ ++  TP   
Sbjct: 92  KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRR 151

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             N+I++ GLCQQS++  A     E   ++  P   S   ++    K G    A  LF  
Sbjct: 152 SHNTIIL-GLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRR 210

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           ML  G+ P A +YN++IHG+C+A +++EALE    M   G  P   T++IL        +
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK 270

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A+++++++   G  PD+VTY+ LI G C I  V++   L E M+ +  K  V+  + 
Sbjct: 271 MDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +CK+GRI EA  +L  M + G  PD+VTY+ L+ G C+  +  +A +L ++M ++ 
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++PN   + A++ GLC+   + EA   F  +  S C  ++  Y  +I G+   G +   +
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK--LHGLEPSAVTYTTFMN 421
           +L+ +++   ISP  V + +L    CK+G+ A A  +L   +  L         Y   ++
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVD 510

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
              + G ++  L  +++M      P       ++ GLCK  +  EA  +LE++
Sbjct: 511 GLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 139/302 (46%), Gaps = 9/302 (2%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
            + + G + +A  ++ +M +      + TY++L+  L      D    L +D+   +   
Sbjct: 264 AHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 323

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V T + +I GLC+  R+++A   L         P VV+ N ++  +C+ G  E A+ L 
Sbjct: 324 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 383

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  GL P+  +Y  L+ GLC A  + EA      M   G  P+  TY+ L  GF   
Sbjct: 384 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 443

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL----REVMLSQGFKLN 237
            Q+ G  K+  +++  G  PD V Y  L    C+ G     L++    RE + S+ +   
Sbjct: 444 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDE 503

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V  ++V    +  +G+++ ALG + +M   G  P     + L+ GLCK  +  +A  +  
Sbjct: 504 VYRFAV--DGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLE 561

Query: 298 EM 299
           E+
Sbjct: 562 EI 563



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 20/239 (8%)

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P + +Y   ++   + G +     L Q++    + P+ V YT +I GLC      +A 
Sbjct: 6   VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +L  DM   G  P  +TYN II + CK   L +A  L+ +M      P   TYN ++DGL
Sbjct: 66  ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C +G ++ A  L   ++    +  + ++ TII   C +  + +A   F        E+  
Sbjct: 126 CKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF-------HEMEA 178

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           RD              PPD     +++    + G L   ++L   M+ SG+ P     N
Sbjct: 179 RD-------------IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYN 224



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 56/136 (41%), Gaps = 20/136 (14%)

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
            N+ P S +Y ILIDGL   G L +A  L   L    ++ + VAYT++I   C       
Sbjct: 4   RNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCM------ 57

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           A +F              D  +  F  M   G PP      V++ A  + G L    +L 
Sbjct: 58  ANSF--------------DDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLI 103

Query: 632 AVMIKSGLLPDKFLIN 647
             MI+ G +PD    N
Sbjct: 104 KKMIEDGHVPDVVTYN 119


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 159/560 (28%), Positives = 276/560 (49%), Gaps = 50/560 (8%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P   S NA + R  K G  ++++  F  M+  G+ P  F+YNI+I  +C  G M  A   
Sbjct: 95  PKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSL 154

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + G+ PD +TY+ L  G+  +  +  +  + +++   G +PD++TY  LI  +C+
Sbjct: 155 FEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCK 214

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              +    +    M  +  K NVI+YS L+ ++CK G +  A+    +M  VGL P+  T
Sbjct: 215 FKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFT 274

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           YS LI   CK   + +A  L +EM  + +  N   +  +L GLCE+ M+ EA   F ++ 
Sbjct: 275 YSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMG 334

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            +    ++  Y  +I G++K+ ++ +A++L+ ++ EK I P I+ + ++++G C   K+ 
Sbjct: 335 KAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLE 394

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           + + ++  +K  G+  + V YTT M+AY + GN    + LL+EM       T VT+  +I
Sbjct: 395 ECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALI 454

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLCK+  +QEA+      Y  G  PD                             H+L+
Sbjct: 455 DGLCKRGLVQEAI------YYFGRMPD-----------------------------HDLQ 479

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P  A Y  LIDGLC N  + +A  L   +Q+ N+   K+AYT +I  +   G+  +A+  
Sbjct: 480 PNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNM 539

Query: 576 FCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
             +M+E G E+ +  YT               + F   M+  G  PD+ +C  +L   ++
Sbjct: 540 RNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYE 599

Query: 621 GGDLGSVFELAAVMIKSGLL 640
            G++    EL   +++ GL+
Sbjct: 600 LGNIDEAIELQNELVEKGLI 619



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 241/503 (47%), Gaps = 3/503 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTN 66
           GM+  A     +M +  +    ++ N+ L+ L      D+  D + D+  +     V+T 
Sbjct: 76  GMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTY 135

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+I  +C++  +  A    ++       P +V+ N ++  Y K+G  + +  LF  M  
Sbjct: 136 NIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKF 195

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD  +YN LI+  C    M  A EF  +M    ++P+ I+YS L         +  
Sbjct: 196 MGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQM 255

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A K    +   G  P+  TY+ LI   C+ GN+ E   L + ML +   LN++ Y+ LL 
Sbjct: 256 AIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLD 315

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C+ G ++EA  L   M   G+ P+L  Y+ LI G  K   + KA++L+NEM  K I P
Sbjct: 316 GLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKP 375

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +    G I+ GLC +  + E ++    +  S    + V+Y  ++D Y K GN  EA+ L 
Sbjct: 376 DILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLL 435

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++ +     ++VTF +LI G CK G V +A      +  H L+P+   YT  ++  C+ 
Sbjct: 436 EEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKN 495

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
             I     L  EM+ K + P  + YT +I G  K    QEA+ +   M  +G+  D   Y
Sbjct: 496 NCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAY 555

Query: 487 NTIIRSFCKCKDLRKAFQLLNQM 509
            +++    +C  +++A + L +M
Sbjct: 556 TSLVWGLSQCGQVQQARKFLAEM 578



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 219/442 (49%), Gaps = 3/442 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRN 62
           Y + G++ ++V +  +MK +  +  + TYN+L+ +      M   ++ + ++K  +   N
Sbjct: 177 YGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPN 236

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V + S +ID LC++  +Q AI F  +       P+  + ++++   CK G    A  L  
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLAD 296

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML+  +  +  +Y  L+ GLC  G M EA E    MG+ GV P+   Y+ L  G   + 
Sbjct: 297 EMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVR 356

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A ++  ++  K   PDI+ +  ++ G C    +EE   +   M   G   N + Y+
Sbjct: 357 SMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYT 416

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+ +  K+G   EA+ LL EM  +G +  +VT+  LI GLCK+  V +AI  +  M   
Sbjct: 417 TLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDH 476

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN   + A++ GLC+   I +A+  FD +   N I D + Y  MIDG +K GN  EA
Sbjct: 477 DLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEA 536

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + +  +++E  I   +  + SL++G  + G+V  AR+ L  +   G+ P     T  +  
Sbjct: 537 LNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRK 596

Query: 423 YCEEGNIQRLLALLQEMETKAI 444
           + E GNI   + L  E+  K +
Sbjct: 597 HYELGNIDEAIELQNELVEKGL 618



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 179/355 (50%), Gaps = 3/355 (0%)

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
           F  N I   ++LSS    G   +   +L+    V + P    +  L   L +   +  A 
Sbjct: 26  FHANNILKELVLSSWVLPG--SDVFEILWTTRNVCV-PGFGVFDALFSVLVELGMLEAAG 82

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           Q +  M   R+ P + +  A L  L +      +R +F  ++ +     V  YNIMI   
Sbjct: 83  QCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHV 142

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K G++  A  L+ Q+ +  ++P IVT+N+LI G+ K G + ++  L + +K  G EP  
Sbjct: 143 CKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDV 202

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           +TY   +N++C+   + R     +EM+ K + P  ++Y+ +I  LCK+  +Q A++   D
Sbjct: 203 ITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVD 262

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M  +G+ P++ TY+++I + CK  +L +AF L ++M   +++    TY  L+DGLC  G 
Sbjct: 263 MTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGM 322

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           +  A+ L  ++ +  ++    AYT +I  H     + KAM  F +M EK  +  I
Sbjct: 323 MNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDI 377



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/453 (21%), Positives = 197/453 (43%), Gaps = 50/453 (11%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           +  L S + + G ++ A      M    + P   + +  +  L K  +   +   + +M 
Sbjct: 65  FDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMV 124

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
              I+P  F +  ++  +C++  +  AR  F+ +       D+V YN +IDGY K+G + 
Sbjct: 125 GAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLD 184

Query: 361 EAV-----------------------------------QLYRQLIEKRISPSIVTFNSLI 385
           E+V                                   + +R++ +K + P+++++++LI
Sbjct: 185 ESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLI 244

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
              CK G +  A +    +   GL P+  TY++ ++A C+ GN+     L  EM  + + 
Sbjct: 245 DALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVD 304

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
              VTYT ++ GLC++  + EA +L   M   GVTP+   Y  +I    K + + KA +L
Sbjct: 305 LNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMEL 364

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
            N+M   +++P    +  ++ GLC    L+    ++  ++E  I    V YTT++ A+  
Sbjct: 365 FNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFK 424

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEI 610
            G+  +A+    +M + G E+++  +                  +F  M  +   P+  +
Sbjct: 425 AGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAV 484

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
              ++    +   +G   +L   M    ++PDK
Sbjct: 485 YTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDK 517


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 156/526 (29%), Positives = 268/526 (50%), Gaps = 38/526 (7%)

Query: 29  VSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILF 85
           VSI   N+LL     +   D+ W +Y+D   S    NVYT +I+++ LC+  +L +  ++
Sbjct: 187 VSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVY 246

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
           L E   K     +V+ N +++ YC+ G    A GL   M   GL P  F+YN LI+GLC 
Sbjct: 247 LSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCK 306

Query: 146 AGSME-----------------------------------EALEFTNDMGRHGVEPDAIT 170
            GS E                                   EA    N+M + GV PD I+
Sbjct: 307 EGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLIS 366

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           +S +   F    ++  A    +K+   G  PD V YT+LI GYC+  +V   LK+R  M+
Sbjct: 367 FSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMV 426

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +G  ++V+ Y+ LL+ +C+   +D+A  L  EM   G+ PD  T + LI G CK   + 
Sbjct: 427 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 486

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           KA+ L+  M  + + P+   +  ++ G C+   + +A+  +  +I        + ++I+I
Sbjct: 487 KALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILI 546

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           +G+  LG + EA +L+ ++ EK I P++VT N++I G+ + G ++ A   L+T+   G+ 
Sbjct: 547 NGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVP 606

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P  +TY T +N++ +E N  R   L+  ME + + P  VTY  ++ G  +  ++QEA  +
Sbjct: 607 PDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMV 666

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           L  M   G+ PD+ TY ++I  +    ++++AF++ ++M      P
Sbjct: 667 LHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVP 712



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 285/575 (49%), Gaps = 20/575 (3%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++I    Q  +L++     Q    + F  S+ + NA++    K+G+ ++A  ++   +K 
Sbjct: 159 LLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKS 218

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G   + ++ NI+++ LC  G ++    + ++M   GV  D +TY+ L   +     +S A
Sbjct: 219 GNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEA 278

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           + ++  +  KG  P + TY  LI G C+ G+ E   ++ + ML  G   N   ++ +L  
Sbjct: 279 FGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVE 338

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            C+   + EA  +  EM   G+ PDL+++S ++    +  ++ +A+  + +M    + P+
Sbjct: 339 SCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPD 398

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           +  +  ++ G C  + ++ A    + ++   C+ DVV YN +++G  +   + +A +L++
Sbjct: 399 TVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFK 458

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           +++E+ + P   T  +LI+G+CK+G +  A  L +T+ L  L+P  VTY T M+ +C+ G
Sbjct: 459 EMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVG 518

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            +++   L  +M ++ I P++++++++I G C    + EA +L ++M   G+ P  +T N
Sbjct: 519 EMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCN 578

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           TII+ + +  +L KA   LN M    + P   TYN LI+      +   A  L+ +++E 
Sbjct: 579 TIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEER 638

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
            +    V Y  I+      G + +A     +M++KG                      PD
Sbjct: 639 GLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGIN--------------------PD 678

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +     ++  +    ++   F +   M++ G +PD
Sbjct: 679 KSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 229/482 (47%), Gaps = 32/482 (6%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
           L   Y R G+V +A  ++  M    LK  + TYN+L                        
Sbjct: 265 LVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNAL------------------------ 300

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
                   I+GLC++   + A   L E  G    P+  + N ++   C+      A+ +F
Sbjct: 301 --------INGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVF 352

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML+ G+ PD  S++ ++      G +  AL +   M   G+ PD + Y+IL  G+   
Sbjct: 353 NEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRN 412

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +SGA K+  +++ +G   D+VTY  L+ G C+   +++  +L + M+ +G   +    
Sbjct: 413 DDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTL 472

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   CK G + +AL L   M    LKPD+VTY+ L+ G CK  ++ KA +L+ +M S
Sbjct: 473 TTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMIS 532

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + I P+  +   ++ G C   +++EA   +D +        +V  N +I GY++ GN+ +
Sbjct: 533 REIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSK 592

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A      +I + + P  +T+N+LI  F K      A  L++ ++  GL P+ VTY   + 
Sbjct: 593 ANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILG 652

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +   G +Q    +L +M  K I P   TYT +I G   +  ++EA ++ ++M   G  P
Sbjct: 653 GFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVP 712

Query: 482 DQ 483
           D 
Sbjct: 713 DD 714



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 139/300 (46%), Gaps = 20/300 (6%)

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           VV+++++I  YV+   + E  + ++ L ++    SI   N+L+    K G V  A ++ +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
                G   +  T    +NA C++G +  +   L EME K +    VTY  ++   C++ 
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            + EA  L++ M   G+ P   TYN +I   CK     +A ++L++M    L P +AT+N
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            ++   C   D+  A+ +   + +  +    +++++I+      G++ +A+ +F +M  K
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKM--K 391

Query: 583 GFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           G                   G  PD  I  +++  + +  D+    ++   M++ G + D
Sbjct: 392 GV------------------GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMD 433


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 163/547 (29%), Positives = 275/547 (50%), Gaps = 5/547 (0%)

Query: 6   YSRTGMVHDAVFVIA-KMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPR 61
           Y+R  +  DA  +++ ++    ++ + + YN LL  L       ++   Y ++       
Sbjct: 135 YARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEP 194

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T + VID LC+  + + A+L L+E +  +  P   +   +M  + + G  E A  L 
Sbjct: 195 DVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLK 254

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G  P + + N+LI+G C  G + +AL +       G EPD +T+S    G    
Sbjct: 255 ARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQN 314

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A KV+  +L +G +PD+ TY+ +I   C  G +EE   +   M+  G   +   +
Sbjct: 315 GHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTF 374

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+ ++C   +++EAL L  E+   GL P++ T++ILI  LCK    H A++L+ EM S
Sbjct: 375 NTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKS 434

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
              +P+   +  ++  LC    + +A      + +S C Q  V YN +IDG  K   I E
Sbjct: 435 SGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEE 494

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +++ Q+    I  + +TFN+LI G C   ++ DA  L+D +   GL+P+ VTY + + 
Sbjct: 495 AEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILT 554

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC++GNI +   +LQ M         VTY  +I GLCK  + Q A++LL  M + G+ P
Sbjct: 555 HYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKP 614

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV-NGDLKNADCL 540
               YN +I+S  +  + R A  L  +M      P + TY I+  GLC   G +K A   
Sbjct: 615 TPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDF 674

Query: 541 LVSLQEH 547
           LV + ++
Sbjct: 675 LVEMADN 681



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 166/603 (27%), Positives = 282/603 (46%), Gaps = 22/603 (3%)

Query: 59  TP-RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           TP R+VY   I   G      L   ++      G E G  +V   + +  Y +L   + A
Sbjct: 87  TPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQ--SFIGSYARLQLFDDA 144

Query: 118 KGLFCLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFT-NDMGRHGVEPDAITYSILA 175
             L    L  +G+  +   YN L+  L   GS  + LE    +M   G+EPD +T++ + 
Sbjct: 145 FDLVSNQLDMFGVQANTEVYNHLLTVLA-EGSKIKLLESAYTEMSSQGIEPDVVTFNTVI 203

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                  Q   A  +++++      PD  T+T L+ G+ + G++E  L+L+  M   G  
Sbjct: 204 DALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCS 263

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
              +  +VL++  CK GR+ +ALG + +  A G +PD VT+S  + GLC+   V  A+++
Sbjct: 264 PTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKV 323

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
              M  +   P+ + +  ++  LC    + EA+   + ++ S C+ D   +N +I     
Sbjct: 324 LGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCT 383

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
              + EA+ L R+L  K +SP++ TFN LI   CK G    A RL + +K  G  P  VT
Sbjct: 384 ENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVT 443

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y   ++  C  G + + L LL+EME      + VTY  +I GLCK+ +++EA ++ + M 
Sbjct: 444 YNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMD 503

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
           V G+  + IT+NT+I   C  + +  A +L++QM    L+P + TYN ++   C  G++ 
Sbjct: 504 VTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNIS 563

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK-- 593
            A  +L ++  +   +  V Y T+I   C       A+     M  KG + + + Y    
Sbjct: 564 KAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVI 623

Query: 594 -------------SFFCMMLSNGFPPDQEICEVMLIAF-HQGGDLGSVFELAAVMIKSGL 639
                        S F  M   G PPD    +++       GG +   F+    M  +G 
Sbjct: 624 QSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGF 683

Query: 640 LPD 642
           +P+
Sbjct: 684 IPE 686



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 20/246 (8%)

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           + + + G++ +   Y   +    E   I+ L +   EM ++ I P  VT+  VI  LC+ 
Sbjct: 150 NQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRA 209

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            + + AV +LE+M    V PD+ T+ T++  F +   +  A +L  +M      PTS T 
Sbjct: 210 RQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTV 269

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N+LI+G C  G + +A   +           +V ++T +   C  G V  A+     M++
Sbjct: 270 NVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQ 329

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           +G E  +  Y+    C+                       G+L     +   M+ SG LP
Sbjct: 330 EGCEPDVYTYSTVINCLC--------------------NNGELEEAKGIVNQMVDSGCLP 369

Query: 642 DKFLIN 647
           D    N
Sbjct: 370 DTTTFN 375


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 156/500 (31%), Positives = 255/500 (51%)

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           AI    +   K   PS+ +   +++ Y        A  L   +LK G  P+  ++N +I+
Sbjct: 74  AISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIIN 133

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
           G CI G + +AL+F  ++   G   D  TY  L  G     QI  A  ++Q++      P
Sbjct: 134 GFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQP 193

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           ++V Y+ LI G C+ G V + L L   +  +G  L+ + Y+ L+   C  GR  E   LL
Sbjct: 194 NLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLL 253

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            +M    + PD  T++ILI  LCK+ ++ +A  +   M  +   P+   + A++ G C +
Sbjct: 254 TKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSR 313

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
           E + EAR  F+ ++      DV+ YN++IDGY K   + EA+ L+++L  K + P+I ++
Sbjct: 314 ENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASY 373

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           NSLI G C +G+++  ++LLD +      P  VTY   ++A C+EG I   L +L  M  
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           K + P  VTY  ++ G C +  +  A  +   M   G+ PD + YN +I  +CK + + +
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A  L  +M   NL P  A+YN LIDGLC  G + +   LL  + +   S   + Y  ++ 
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553

Query: 562 AHCAEGDVHKAMTFFCQMVE 581
           A C      KA++ F Q+VE
Sbjct: 554 AFCKTQPFDKAISLFRQIVE 573



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 182/672 (27%), Positives = 296/672 (44%), Gaps = 61/672 (9%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVY 64
           R   V DAV    +M  +        ++ LL     + H      L+  ++      ++ 
Sbjct: 32  RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL-FCL 123
           T +I+I+    QS    A   L       + P++V+ N I++ +C  G   + K L FC 
Sbjct: 92  TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGM--IFKALDFCQ 149

Query: 124 -MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +L  G   D F+Y  LI+GL   G ++ AL    +M +  V+P+ + YS L  G     
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +S A  +  ++  +G   D VTY  LI G C +G  +E  +L   M+ +    +   ++
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L+ ++CK GRI EA G+L  M   G KPD+VTY+ L+ G C ++ VH+A +L+N M  +
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   +  ++ G C+ +M+ EA + F  L   N +  +  YN +IDG    G I   
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +L  ++      P +VT+N LI   CK G++ +A  +L  +   G++P+ VTY   M+ 
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC   N+     +   M    + P  + Y V+I G CK   + EA+ L ++M    + PD
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL------------------ 524
             +YN++I   C    +    +LL++M      P   TYNIL                  
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR 569

Query: 525 ----------------IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
                           +D LC    LK A+  L  L  H  S     YT +I A C +G 
Sbjct: 570 QIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGS 629

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
             +AM    +M +                    N  PPD    E+++    Q  +     
Sbjct: 630 FGEAMLLLSKMED--------------------NDRPPDAITFEIIIGVLLQRNETDKAE 669

Query: 629 ELAAVMIKSGLL 640
           +L   MI  GL+
Sbjct: 670 KLREEMIARGLV 681



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 236/486 (48%)

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
           + C+    + A   F  M++    P    ++ L+  +   G    A+     +   G+ P
Sbjct: 29  KNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISP 88

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
              T++IL   +   S  + A+ ++  +L  G  P++VT+  +I G+C  G + + L   
Sbjct: 89  SIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFC 148

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           + +L+QG+  +   Y  L++ + K+G+I  AL LL EME   ++P+LV YS LI GLCK 
Sbjct: 149 QNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKD 208

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
             V  A+ L +++  + I  ++  + +++ G C      E       ++  N   D   +
Sbjct: 209 GFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF 268

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           NI+ID   K G I EA  +   + ++   P IVT+N+L+ G+C    V +AR L + +  
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK 328

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            GLEP  + Y   ++ YC+   +   + L +E+  K + PT  +Y  +I GLC   ++  
Sbjct: 329 RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISH 388

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
             +LL++M+     PD +TYN +I + CK   + +A  +L  M    ++P   TYN ++D
Sbjct: 389 VKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMD 448

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           G C+  ++  A  +   + +  +    + Y  +I  +C    V +A+  F +M  K    
Sbjct: 449 GYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIP 508

Query: 587 SIRDYT 592
            I  Y 
Sbjct: 509 DIASYN 514



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 209/452 (46%)

Query: 141 HGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
           H  C   ++++A+   N M R    P    +  L      +     A  +  +L  KG  
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P I T+T+LI  Y    +      L   +L  G++ N++ ++ +++  C +G I +AL  
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
              + A G   D  TY  LI GL K  ++  A+ L  EM    + PN   + A++ GLC+
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              +++A      +     + D V YN +IDG   +G   E  QL  +++ + + P   T
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT 267

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           FN LI   CK G++ +A+ +L  +   G +P  VTY   M  YC   N+     L   M 
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            + + P  + Y V+I G CK   + EA+ L +++    + P   +YN++I   C    + 
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRIS 387

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
              +LL++M      P   TYNILID LC  G +  A  +LV + +  +    V Y  ++
Sbjct: 388 HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             +C   +V+ A   F +MV+ G E  I +Y 
Sbjct: 448 DGYCLRNNVNVAKDIFNRMVKSGLEPDILNYN 479


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 156/533 (29%), Positives = 272/533 (51%), Gaps = 18/533 (3%)

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFT-NDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           +G+  D   YN L++ L + GS  + LE   ++MG  G++PD +T++ L K      Q+ 
Sbjct: 144 FGIQADTVVYNHLLNVL-VEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVR 202

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  +++++   G  PD  T+T L+ G+ + G+++  L+++  ML  G     +  +VL+
Sbjct: 203 TAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLI 262

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           +  CK GR+++ALG + +  A G +PD +TY+  + GLC+   V  A+++ + M  +   
Sbjct: 263 NGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHD 322

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+ F +  ++  LC+   + EA+   + ++   C+ D+  +N +I        + EA+ L
Sbjct: 323 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDL 382

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
            RQ+  K +SP + TFN LI   CK G    A RL + +K  G  P  VTY T ++  C 
Sbjct: 383 ARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCS 442

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G + + L LL+EME+     + VTY  +I GLCK+ +++EA ++ + M + G++ + IT
Sbjct: 443 LGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 502

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           +NT+I   CK K +  A QL++QM    L+P + TYN ++   C  GD+K A  +L ++ 
Sbjct: 503 FNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMT 562

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------------ 593
            +   +  V Y T+I   C  G    A+     M  KG   + + Y              
Sbjct: 563 ANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTR 622

Query: 594 ---SFFCMMLSNGFPPDQEICEVMLIAF-HQGGDLGSVFELAAVMIKSGLLPD 642
              + F  M   G PPD    +++       GG +   F+    M+  G +P+
Sbjct: 623 DAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPE 675



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 165/586 (28%), Positives = 286/586 (48%), Gaps = 43/586 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQT----YNSLLYNL---RHTDIMWDLYDDIKVSE 58
           Y+R  +  DAV ++  + +LD    IQ     YN LL  L       ++  +Y ++    
Sbjct: 123 YARQQLFVDAVDLV--LNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERG 180

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +V T + ++  LC+  +++ A+L L+E +     P   +   +M  + + G  + A 
Sbjct: 181 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAAL 240

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +   ML+ G  P   + N+LI+G C  G +E+AL +      +G EPD ITY+    G 
Sbjct: 241 RVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGL 300

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +  A KV+  ++ +G DPD+ TY +++   C+ G +EE   +   M+ +G   ++
Sbjct: 301 CQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDI 360

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             ++ L+ ++C   R++EAL L  ++   GL PD+ T++ILI  LCK      A++L+ E
Sbjct: 361 TTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEE 420

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M S   +P+   +  ++  LC    + +A      +  + C +  V YN +IDG  K   
Sbjct: 421 MKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMR 480

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I EA +++ Q+  + IS + +TFN+LI G CK+ ++ DA +L+  +   GL+P+ +TY +
Sbjct: 481 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNS 540

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +  YC++G+I++   +LQ M         VTY  +I GLCK  + Q A++LL  M + G
Sbjct: 541 ILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 600

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           +      YN +I+S  +  + R A  L  +M      P + TY I+  GLC  G      
Sbjct: 601 MRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGG------ 654

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
                                       G + +A  F  +MV+KGF
Sbjct: 655 ----------------------------GSIREAFDFLLEMVDKGF 672



 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 154/518 (29%), Positives = 265/518 (51%), Gaps = 10/518 (1%)

Query: 18  VIAKMKELDLKVSIQTYNSLL------YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           V ++M E  +K  + T+N+L+      + +R   +M +   ++  S    +  T + ++ 
Sbjct: 172 VYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLE---EMSSSGVAPDETTFTTLMQ 228

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           G  ++  ++ A+            P+ V++N +++ YCKLG  E A G     +  G  P
Sbjct: 229 GFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEP 288

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  +YN  ++GLC  G +  AL+  + M + G +PD  TY+I+        Q+  A  ++
Sbjct: 289 DQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 348

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            +++ +G  PDI T+  LI   C    +EE L L   +  +G   +V  +++L++++CK 
Sbjct: 349 NQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKV 408

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G    AL L  EM++ G  PD VTY+ LI  LC   K+ KA+ L  EM S     ++  +
Sbjct: 409 GDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTY 468

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             I+ GLC+K  I EA   FD + +    ++ + +N +IDG  K   I +A QL  Q+I 
Sbjct: 469 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMIS 528

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           + + P+ +T+NS++  +CK G +  A  +L T+  +G E   VTY T +N  C+ G  Q 
Sbjct: 529 EGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQV 588

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            L LL+ M  K +  T   Y  VI+ L ++   ++A+ L  +M  +G  PD  TY  + R
Sbjct: 589 ALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFR 648

Query: 492 SFCKCK-DLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
             C+    +R+AF  L +M      P  +++ +L +GL
Sbjct: 649 GLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGL 686



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 143/306 (46%), Gaps = 20/306 (6%)

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D V+YN +++  V+   +     +Y ++ E+ I P +VTFN+L+   C+  +V  A  +L
Sbjct: 149 DTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLML 208

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           + +   G+ P   T+TT M  + EEG+I+  L +   M      PT VT  V+I G CK 
Sbjct: 209 EEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKL 268

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++++A+  ++     G  PDQITYNT +   C+   +  A ++++ M     +P   TY
Sbjct: 269 GRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTY 328

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           NI+++ LC NG L+ A  +L  + E         + T+I A C+   + +A+    Q+  
Sbjct: 329 NIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTL 388

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           KG                      PD     +++ A  + GD      L   M  SG  P
Sbjct: 389 KGLS--------------------PDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTP 428

Query: 642 DKFLIN 647
           D+   N
Sbjct: 429 DEVTYN 434



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 4/171 (2%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVYTNSI 68
           + DA  +I++M    L+ +  TYNS+L +  +  DI    D+   +  +    +V T   
Sbjct: 516 IDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGT 575

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+GLC+  R Q A+  L+    K    +  + N ++    +      A  LF  M + G
Sbjct: 576 LINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVG 635

Query: 129 LHPDAFSYNILIHGLCIAG-SMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             PDAF+Y I+  GLC  G S+ EA +F  +M   G  P+  ++ +LA+G 
Sbjct: 636 EPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGL 686


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 155/491 (31%), Positives = 262/491 (53%), Gaps = 5/491 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLM-LKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
           P V +   ++  +CK+G  +V KG   L  ++    P+ F+YN  I GLC  G+++EALE
Sbjct: 240 PDVYTYTNVIKAHCKVG--DVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALE 297

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
               M   G+ PD  TY++L  GF    +   A  + + +   G +P+  TYT LI G+ 
Sbjct: 298 VKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFI 357

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           + GN+EE L++++ M+++G KLNV+ Y+ ++  + K+G + +A+ L  EM   G++PD  
Sbjct: 358 KEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTW 417

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY++LI G  K   + KA +L  EM +++++P+ F +  ++ GLC    + +A    D +
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM 477

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           I +    +V +Y  +I  YV+      A++L + +I   + P +  +N LI G C+  KV
Sbjct: 478 IRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKV 537

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +A+ LL  +   G++P+A TY  F+N Y + G IQ      ++M +  I P +V YT++
Sbjct: 538 EEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTIL 597

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           IKG C      EA+   + M   G+ PD   Y+ II S  K    ++A  +  +     +
Sbjct: 598 IKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV 657

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK--AHCAEGDVHKA 572
            P    YN LI G C  GD++ A  L   +  + I+   V Y T+I    +C  G++ +A
Sbjct: 658 VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEA 717

Query: 573 MTFFCQMVEKG 583
              F +M+ KG
Sbjct: 718 FKLFDEMISKG 728



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 170/593 (28%), Positives = 292/593 (49%), Gaps = 39/593 (6%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN-LRHTDIMW--DLYDDIKVSETPRNV 63
           ++ G +  A+ +  +M    ++    TYN L+   L+  D+    +L  ++K  +   + 
Sbjct: 392 AKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP 451

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T S++I GLC  S LQ A   L +       P+V     ++  Y +    E+A  L  +
Sbjct: 452 FTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKI 511

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G+ PD F YN LI GLC A  +EEA     DMG  G++P+A TY      +    +
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I  A +  + +L  G  P+ V YT+LI G+C +GN  E L   + ML +G   ++ AYS 
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ S+ K+G+  EA+G+  +    G+ PD+  Y+ LI G CK+  + KA QLY+EM    
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691

Query: 304 ISPNSFAHGAIL--LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG--------- 352
           I+PN   +  ++   G C+   +TEA   FD +I      D  +Y I+IDG         
Sbjct: 692 INPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEK 751

Query: 353 -------------------------YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                                    + K G + EA +L+  +++K+++P+IVT+  LI  
Sbjct: 752 ALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 811

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           + K   + +A +L   ++   + P+ +TYT+ + +Y + GN  ++++L ++ME + I   
Sbjct: 812 YGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACD 871

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            + Y V+    CK+ K  EA++LL    V G+  +   ++ +I   CK K +    +LL+
Sbjct: 872 AIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLS 931

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +M    L  +S T N L+ G   +G+   A  +L  +Q      T ++ T  I
Sbjct: 932 EMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSI 984



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 158/553 (28%), Positives = 268/553 (48%), Gaps = 6/553 (1%)

Query: 35  NSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAG 91
           N+L+ +L   ++M   W +Y  +  ++   +VYT + VI   C+   +    + L E   
Sbjct: 211 NNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME- 269

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           KE  P++ + NA +   C+ G  + A  +  LM++ GL PD  +Y +L+ G C     +E
Sbjct: 270 KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A      M   G+ P+  TY+ L  GF     I  A ++  +++ +G   ++VTY  +I 
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           G  + G + + + L   ML  G + +   Y++L+    KS  + +A  LL EM+A  L P
Sbjct: 390 GIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTP 449

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
              TYS+LI GLC    + KA ++ ++M    + PN F +G ++    ++     A    
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             +I +  + D+  YN +I G  +   + EA  L   + EK I P+  T+ + I  + K+
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G++  A R    +   G+ P+ V YT  +  +C+ GN    L+  + M  K + P    Y
Sbjct: 570 GEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAY 629

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           + +I  L K  K +EA+ +       GV PD   YN++I  FCK  D+ KA QL ++M  
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH 689

Query: 512 HNLEPTSATYNILID--GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
           + + P    YN LI+  G C +G+L  A  L   +    IS     Y  +I     EG++
Sbjct: 690 NGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNL 749

Query: 570 HKAMTFFCQMVEK 582
            KA++ F +  +K
Sbjct: 750 EKALSLFHEAQQK 762



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 172/708 (24%), Positives = 309/708 (43%), Gaps = 94/708 (13%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           +TG V +A+ V   M E  L     TY  L+      + +     +++ +  S    N +
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +IDG  ++  +++A+    E   +    +VV+ NA++    K G    A  LF  M
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L  G+ PD ++YN+LI G   +  M +A E   +M    + P   TYS+L  G    S +
Sbjct: 408 LMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDL 467

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +V+ +++  G  P++  Y  LI  Y Q    E  ++L ++M++ G   ++  Y+ L
Sbjct: 468 QKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCL 527

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +C++ +++EA  LL +M   G+KP+  TY   I    K  ++  A + + +M S  I
Sbjct: 528 IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587

Query: 305 SPNSFAHGAILLGLC----------------EKEMITEARMY------------------ 330
            PN+  +  ++ G C                EK +I + R Y                  
Sbjct: 588 VPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMG 647

Query: 331 -FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI--YG 387
            F   + +  + DV LYN +I G+ K G+I +A QLY +++   I+P+IV +N+LI  YG
Sbjct: 648 VFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYG 707

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG-- 445
           +CK+G + +A +L D +   G+ P    Y   ++   +EGN+++ L+L  E + K++G  
Sbjct: 708 YCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSL 767

Query: 446 --------------------------------PTHVTYTVVIKGLCKQWKLQEAVQLLED 473
                                           P  VTYT++I    K   ++EA QL  D
Sbjct: 768 SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 827

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M    + P+ +TY +++ S+ +  +  K   L   M    +   +  Y ++    C  G 
Sbjct: 828 METRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK 887

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
              A  LL       I L    +  +I   C E  +   +    +M ++   +S      
Sbjct: 888 SLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLS------ 941

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                          + C  +L+ F++ G+     ++  VM + G +P
Sbjct: 942 --------------SKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 975



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 162/618 (26%), Positives = 284/618 (45%), Gaps = 37/618 (5%)

Query: 66  NSIVIDGLCQQSRLQDAIL---FLQETAGKEFGPSVVSLNAIMS-RYCKLGFAEVAKGLF 121
           N  ++  + Q+S + D++    F   ++ K   P  +   +I++ R C  G    A  + 
Sbjct: 84  NPEIVCSVLQKSEIDDSVRLQNFFHWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNML 143

Query: 122 CLMLKYGLHP-----------------DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
             +L+    P                 +   ++I I    + G + EA          G 
Sbjct: 144 EKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGF 203

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            P  I  + L +     + +   WKV   ++     PD+ TYT +I  +C++G+V +G K
Sbjct: 204 FPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG-K 262

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           +    + +  K N+  Y+  +  +C++G +DEAL +   M   GL PD  TY++L+ G C
Sbjct: 263 MVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFC 322

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           KQ +  +A  ++  M S  ++PN F + A++ G  ++  I EA    D +I      +VV
Sbjct: 323 KQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVV 382

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            YN MI G  K G + +A+ L+ +++   I P   T+N LI G+ K+  +A A  LL  +
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           K   L PS  TY+  ++  C   ++Q+   +L +M    + P    Y  +IK   ++ + 
Sbjct: 443 KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRY 502

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           + A++LL+ M   GV PD   YN +I   C+ K + +A  LL  M    ++P + TY   
Sbjct: 503 EMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAF 562

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           I+    +G+++ A+     +    I    V YT +IK HC  G+  +A++ F  M+EKG 
Sbjct: 563 INLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGL 622

Query: 585 EISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
              IR Y+                  F   L  G  PD  +   ++  F + GD+    +
Sbjct: 623 IPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQ 682

Query: 630 LAAVMIKSGLLPDKFLIN 647
           L   M+ +G+ P+  + N
Sbjct: 683 LYDEMLHNGINPNIVVYN 700


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 156/500 (31%), Positives = 255/500 (51%)

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           AI    +   K   PS+ +   +++ Y        A  L   +LK G  P+  ++N +I+
Sbjct: 74  AISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIIN 133

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
           G CI G + +AL+F  ++   G   D  TY  L  G     QI  A  ++Q++      P
Sbjct: 134 GFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQP 193

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           ++V Y+ LI G C+ G V + L L   +  +G  L+ + Y+ L+   C  GR  E   LL
Sbjct: 194 NLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLL 253

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            +M    + PD  T++ILI  LCK+ ++ +A  +   M  +   P+   + A++ G C +
Sbjct: 254 TKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSR 313

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
           E + EAR  F+ ++      DV+ YN++IDGY K   + EA+ L+++L  K + P+I ++
Sbjct: 314 ENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASY 373

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           NSLI G C +G+++  ++LLD +      P  VTY   ++A C+EG I   L +L  M  
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           K + P  VTY  ++ G C +  +  A  +   M   G+ PD + YN +I  +CK + + +
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A  L  +M   NL P  A+YN LIDGLC  G + +   LL  + +   S   + Y  ++ 
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553

Query: 562 AHCAEGDVHKAMTFFCQMVE 581
           A C      KA++ F Q+VE
Sbjct: 554 AFCKTQPFDKAISLFRQIVE 573



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 182/672 (27%), Positives = 296/672 (44%), Gaps = 61/672 (9%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVY 64
           R   V DAV    +M  +        ++ LL     + H      L+  ++      ++ 
Sbjct: 32  RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL-FCL 123
           T +I+I+    QS    A   L       + P++V+ N I++ +C  G   + K L FC 
Sbjct: 92  TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGM--IFKALDFCQ 149

Query: 124 -MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +L  G   D F+Y  LI+GL   G ++ AL    +M +  V+P+ + YS L  G     
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +S A  +  ++  +G   D VTY  LI G C +G  +E  +L   M+ +    +   ++
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L+ ++CK GRI EA G+L  M   G KPD+VTY+ L+ G C ++ VH+A +L+N M  +
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   +  ++ G C+ +M+ EA + F  L   N +  +  YN +IDG    G I   
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +L  ++      P +VT+N LI   CK G++ +A  +L  +   G++P+ VTY   M+ 
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC   N+     +   M    + P  + Y V+I G CK   + EA+ L ++M    + PD
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL------------------ 524
             +YN++I   C    +    +LL++M      P   TYNIL                  
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR 569

Query: 525 ----------------IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
                           +D LC    LK A+  L  L  H  S     YT +I A C +G 
Sbjct: 570 QIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGS 629

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
             +AM    +M +                    N  PPD    E+++    Q  +     
Sbjct: 630 FGEAMLLLSKMED--------------------NDRPPDAITFEIIIGVLLQRNETDKAE 669

Query: 629 ELAAVMIKSGLL 640
           +L   MI  GL+
Sbjct: 670 KLREEMIARGLV 681



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 236/486 (48%)

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
           + C+    + A   F  M++    P    ++ L+  +   G    A+     +   G+ P
Sbjct: 29  KNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISP 88

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
              T++IL   +   S  + A+ ++  +L  G  P++VT+  +I G+C  G + + L   
Sbjct: 89  SIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFC 148

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           + +L+QG+  +   Y  L++ + K+G+I  AL LL EME   ++P+LV YS LI GLCK 
Sbjct: 149 QNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKD 208

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
             V  A+ L +++  + I  ++  + +++ G C      E       ++  N   D   +
Sbjct: 209 GFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF 268

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           NI+ID   K G I EA  +   + ++   P IVT+N+L+ G+C    V +AR L + +  
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK 328

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            GLEP  + Y   ++ YC+   +   + L +E+  K + PT  +Y  +I GLC   ++  
Sbjct: 329 RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISH 388

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
             +LL++M+     PD +TYN +I + CK   + +A  +L  M    ++P   TYN ++D
Sbjct: 389 VKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMD 448

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           G C+  ++  A  +   + +  +    + Y  +I  +C    V +A+  F +M  K    
Sbjct: 449 GYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIP 508

Query: 587 SIRDYT 592
            I  Y 
Sbjct: 509 DIASYN 514



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 209/452 (46%)

Query: 141 HGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
           H  C   ++++A+   N M R    P    +  L      +     A  +  +L  KG  
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P I T+T+LI  Y    +      L   +L  G++ N++ ++ +++  C +G I +AL  
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
              + A G   D  TY  LI GL K  ++  A+ L  EM    + PN   + A++ GLC+
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              +++A      +     + D V YN +IDG   +G   E  QL  +++ + + P   T
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT 267

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           FN LI   CK G++ +A+ +L  +   G +P  VTY   M  YC   N+     L   M 
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            + + P  + Y V+I G CK   + EA+ L +++    + P   +YN++I   C    + 
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRIS 387

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
              +LL++M      P   TYNILID LC  G +  A  +LV + +  +    V Y  ++
Sbjct: 388 HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             +C   +V+ A   F +MV+ G E  I +Y 
Sbjct: 448 DGYCLRNNVNVAKDIFNRMVKSGLEPDILNYN 479


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 171/600 (28%), Positives = 294/600 (49%), Gaps = 14/600 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T ++ I GLC+  R+ +A+      + K     V +   ++   CK+   E  + + 
Sbjct: 249 SVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMM 308

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+++G  P   + + L+ GL   G++  A +  N + + GV P    Y+ L       
Sbjct: 309 NEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKD 368

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  +   +  KG  P+ VTY++LI  +C+ G ++  L     M   G K  V  Y
Sbjct: 369 GKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPY 428

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S L+S  CK G++  A  L  EM A GLKP++V Y+ LI G CK+ ++H A +LY+EM  
Sbjct: 429 SSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTG 488

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K ISPN++   A++ GLC    + EA   F  ++  N I + V YN++I+G+ K GN   
Sbjct: 489 KGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVR 548

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +L  +++EK + P   T+  LI G C  G+V++AR  ++ ++    + + + ++  ++
Sbjct: 549 AFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLH 608

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC+EG +   L   +EM  + +    V Y+V+I G+ +Q   +  + LL+ M+  G+ P
Sbjct: 609 GYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRP 668

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D + Y T+I +  K  +L+ AF L + M      P   TY  LI+GLC  G +  A+ L 
Sbjct: 669 DNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLC 728

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK------GFEISIRDYTK-- 593
             +   N    +  Y   +    +EG++ KA+     ++E        + I IR + K  
Sbjct: 729 REMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLG 788

Query: 594 ------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                      M+ +G  PD      ++  + + GDL    +L   M+  G+ PD    N
Sbjct: 789 RIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYN 848



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/563 (28%), Positives = 283/563 (50%), Gaps = 10/563 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G +  A  ++ K+K+  +  S+  YN+L+ ++      D    L++++       N  
Sbjct: 332 KKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDV 391

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T SI+ID  C++ +L  A+ FL +        +V   ++++S +CKLG    AK LF  M
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  GL P+   Y  LI G C  G +  A    ++M   G+ P+  T++ L  G    +++
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A K+  +++     P+ VTY VLI G+C+ GN     +L + M+ +G   +   Y  L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +S +C +GR+ EA   + +++    K + + +S L+ G CK+ ++  A+    EM  + +
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV 631

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIM---SNCIQDVVLYNIMIDGYVKLGNIGE 361
           + +   +  ++ G+  ++   + R   D L          D VLY  MID   K GN+  
Sbjct: 632 AMDLVCYSVLIYGILRQQ---DRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKM 688

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+  ++ +   P++VT+ +LI G CK G +  A  L   +      P+  TY  F++
Sbjct: 689 AFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLD 748

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
               EGNI++ + L  ++  +      VTY ++I+G CK  ++QEA ++L +M   G++P
Sbjct: 749 YLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISP 807

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D I+Y+TII  +C+  DL++A +L   M    + P +  YN LI G CV G+L  A  L 
Sbjct: 808 DCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELR 867

Query: 542 VSLQEHNISLTKVAYTTIIKAHC 564
             +    +   +  Y ++I   C
Sbjct: 868 DDMMRRGVKPNRATYNSLIHGTC 890



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 146/535 (27%), Positives = 261/535 (48%), Gaps = 15/535 (2%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           LM+  G+ P   + + +++GL        AL   +++   G+ PD   Y+ + +    L 
Sbjct: 170 LMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELK 229

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               A +VI ++   G D  + TY V I G C+   V E ++++ ++  +G + +V  Y 
Sbjct: 230 DFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYC 289

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +CK    +    ++ EM   G  P     S L+ GL K+  +  A  L N++   
Sbjct: 290 TLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKF 349

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            ++P+ F + A++  +C+   + EA   F+++       + V Y+I+ID + K G +  A
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +    ++ E  I  ++  ++SLI G CK GK+  A+ L D +  +GL+P+ V YT+ ++ 
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC+EG +     L  EM  K I P   T+T +I GLC   ++ EA +L  +M    V P+
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           ++TYN +I   CK  +  +AF+LL++M    L P + TY  LI GLC  G +  A   + 
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMN 589

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM---- 598
            LQ     L ++ ++ ++  +C EG +  A+    +M+ +G  + +  Y+   + +    
Sbjct: 590 DLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQ 649

Query: 599 -----------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                      M   G  PD  +   M+ A  + G+L   F L  +M+  G LP+
Sbjct: 650 DRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPN 704



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 251/492 (51%), Gaps = 4/492 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           + + G +  A+  + KM E+ +K ++  Y+SL+     L        L+D++  +    N
Sbjct: 400 FCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPN 459

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V   + +I G C++  L +A     E  GK   P+  +  A++S  C       A  LF 
Sbjct: 460 VVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFG 519

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+++ + P+  +YN+LI G C  G+   A E  ++M   G+ PD  TY  L  G     
Sbjct: 520 EMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTG 579

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++S A + +  L  +    + + ++ L+ GYC+ G +++ L     ML +G  ++++ YS
Sbjct: 580 RVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYS 639

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           VL+  + +       + LL +M   GL+PD V Y+ +I    K   +  A  L++ M S+
Sbjct: 640 VLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSE 699

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              PN   + A++ GLC+  ++ +A +    ++ SN + +   Y   +D     GNI +A
Sbjct: 700 GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKA 759

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +QL+  L+E  ++ + VT+N LI GFCK G++ +A  +L  +   G+ P  ++Y+T +  
Sbjct: 760 IQLHDVLLEGFLA-NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYE 818

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC  G+++  + L + M  + + P  V Y  +I G C   +L +A +L +DM   GV P+
Sbjct: 819 YCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPN 878

Query: 483 QITYNTIIRSFC 494
           + TYN++I   C
Sbjct: 879 RATYNSLIHGTC 890



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 251/530 (47%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T S V++GL +  + + A+    E       P V    A++   C+L     A+ +  
Sbjct: 180 IRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIG 239

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G      +YN+ I GLC    + EA+E  N +   G+  D  TY  L  G   + 
Sbjct: 240 RMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVE 299

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +     +++ +++  G  P     + L+ G  + GN+     L   +   G   ++  Y+
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++SMCK G++DEA  L   M   GL P+ VTYSILI   CK+ K+  A+    +M   
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I    + + +++ G C+   +  A+  FD +I +    +VV+Y  +I GY K G +  A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +LY ++  K ISP+  TF +LI G C   ++A+A +L   +    + P+ VTY   +  
Sbjct: 480 FRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +C+EGN  R   LL EM  K + P   TY  +I GLC   ++ EA + + D+       +
Sbjct: 540 HCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLN 599

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           ++ ++ ++  +CK   L  A     +M    +      Y++LI G+    D ++   LL 
Sbjct: 600 EMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLK 659

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            + +  +    V YTT+I A+   G++  A   +  MV +G   ++  YT
Sbjct: 660 QMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYT 709



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 197/440 (44%), Gaps = 22/440 (5%)

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           + +LI  Y Q     +GL +  +M+  G    +   S +L+ + +  +   AL L  E+ 
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
           + GL+PD+  Y+ ++R LC+     +A ++   M S     +   +   + GLC+ + + 
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA    + L       DV  Y  ++ G  K+       ++  ++IE    PS    ++L+
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G  K G +  A  L++ +K  G+ PS   Y   +N+ C++G +    +L   M  K + 
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  VTY+++I   CK+ KL  A+  L  M  +G+      Y+++I   CK   LR A  L
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
            ++M  + L+P    Y  LI G C  G+L NA  L   +    IS     +T +I   C 
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH-QGGDL 624
              + +A   F +MVE                    N  P   E+   +LI  H + G+ 
Sbjct: 508 ANRMAEANKLFGEMVE-------------------WNVIP--NEVTYNVLIEGHCKEGNT 546

Query: 625 GSVFELAAVMIKSGLLPDKF 644
              FEL   M++ GL+PD +
Sbjct: 547 VRAFELLDEMVEKGLVPDTY 566



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 69/124 (55%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T +I+I G C+  R+Q+A   L         P  +S + I+  YC+ G  + A  L+
Sbjct: 773 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 832

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  G++PD  +YN LI+G C+ G + +A E  +DM R GV+P+  TY+ L  G  L+
Sbjct: 833 ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLM 892

Query: 182 SQIS 185
           S +S
Sbjct: 893 SSVS 896


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 149/461 (32%), Positives = 242/461 (52%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M +  + PD++SY ILI GL  AG + +A      +   GV P  + Y+ L  G  + + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A ++   +  +G  P  VTY V+I   C+ G +EE   L + M+  G   +V+ Y+ 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++  +CKS R++EAL L  EME +G  P+  +++ +I GLC+Q K+ +A Q+++EM +K 
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I P+S+++G ++ GL +   + EA   F  ++ S      V YN++I G      + EA+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L++ +  K   PS  TFN LI   CK GK+ +A RLL  +   G  P  VTY+T ++  
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C    +     LL++M  +   PT VT   +I GLCK  +++EA ++L+ M   G +PD 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TYNT++   C+     +A +LL+ M    L P   TY  L+ GLC    L  A  +   
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           ++    +     YT +I   C+ G V   +  F +MV  G 
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGI 461



 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 159/558 (28%), Positives = 259/558 (46%), Gaps = 20/558 (3%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           +   P   S   ++    K G    A+ LF  +L  G+ P   +Y  LIHGLC+A S ++
Sbjct: 4   RNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 63

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A E   DM R G  P  +TY+++         +  A  +I+K++  G  PD+VTY  ++ 
Sbjct: 64  ARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           G C+   VEE L L   M   G   N  +++ ++  +C+  +ID+A  + +EMEA  + P
Sbjct: 124 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPP 183

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D  +Y ILI GL K  K+++A +L+  M    I+P++  +  ++ G+C    + EA   F
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
            S+    C      +NI+ID + K G + EA +L +++ +    P +VT+++LI G C  
Sbjct: 244 KSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 303

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
            +V DAR LL+ +     +P+ VT  T ++  C+ G I+    +L  M +    P  VTY
Sbjct: 304 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             ++ G C+  + + A +LL DM   G+ P+ +TY  ++   CK   L +A  +  QM  
Sbjct: 364 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 423

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
               P   TY  LI G C  G +     L   +    IS   V Y T+    C  G   +
Sbjct: 424 SGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 483

Query: 572 AMTFFCQ-----------------MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
           A+    +                  V+   E    +    F   M+  G  P  E C  +
Sbjct: 484 ALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASL 543

Query: 615 LIAF---HQGGDLGSVFE 629
           +       QGG+  +V E
Sbjct: 544 VAGLCKSGQGGEARAVLE 561



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 164/586 (27%), Positives = 280/586 (47%), Gaps = 22/586 (3%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNV 63
           ++ G ++DA  +  K+    +  S   Y SL++ L      D   +L+ D+     P + 
Sbjct: 21  AKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSP 80

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T +++ID  C++  L++A   +++       P VV+ N +M   CK    E A  LF  
Sbjct: 81  VTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNE 140

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M + G  P+  S+N +I GLC    +++A +  ++M    + PD+ +Y IL  G     +
Sbjct: 141 MERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGK 200

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           ++ A+K+ Q++L  G  P  VTY V+I G C    ++E L+L + M S+G + +   +++
Sbjct: 201 LNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNI 260

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+ + CK G++DEA  LL  M   G  PD+VTYS LI GLC   +V  A  L  +M  ++
Sbjct: 261 LIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P       ++ GLC+   I EAR   D+++ S    DVV YN ++ G+ + G    A 
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 380

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L   ++ + ++P++VT+ +L+ G CK  ++ +A  +   +K  G  P+  TYT  +  +
Sbjct: 381 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 440

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL---EDMYVIGVT 480
           C  G +   L L  EM    I P HV Y  +   LCK  +   A+++L    +       
Sbjct: 441 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAW 500

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            D++ Y   +    +   +  A   +  M      P       L+ GLC +G    A  +
Sbjct: 501 GDEV-YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAV 559

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           L  + +       +AY    +         KA  F  +MV KG+EI
Sbjct: 560 LEEIMD-------LAYGGKARG--------KAAKFVEEMVGKGYEI 590



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 240/484 (49%), Gaps = 20/484 (4%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M    V PD+ +Y IL  G     +++ A  + QKLL  G  P  V YT LI G C   +
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
            ++  +L   M  +G   + + Y+V++ + CK G ++EA  L+ +M   G  PD+VTY+ 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           ++ GLCK  +V +A+ L+NEM     +PN  +H  I+LGLC++  I +A   F  +   +
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              D   Y I+IDG  K G + EA +L++++++  I+PS VT+N +I+G C    + +A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            L  +++  G  PS  T+   ++A+C+ G +     LL+ M      P  VTY+ +I GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           C   ++ +A  LLEDM      P  +T NT+I   CK   +++A ++L+ M      P  
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TYN L+ G C  G  + A  LL  +    ++   V YT ++   C    + +A   F Q
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
           M   G   ++  YT                     +++ F   G +    +L   M+ +G
Sbjct: 421 MKSSGCAPNLFTYT--------------------ALILGFCSAGQVDGGLKLFGEMVCAG 460

Query: 639 LLPD 642
           + PD
Sbjct: 461 ISPD 464



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 20/239 (8%)

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P + +Y   ++   + G +     L Q++    + P+ V YT +I GLC      +A 
Sbjct: 6   VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +L  DM   G  P  +TYN +I + CK   L +A  L+ +M      P   TYN ++DGL
Sbjct: 66  ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C +  ++ A  L   ++    +  + ++ TII   C +  + +A   F +M  K      
Sbjct: 126 CKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDI---- 181

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                           PPD     +++    + G L   ++L   M+ SG+ P     N
Sbjct: 182 ----------------PPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYN 224



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 56/136 (41%), Gaps = 20/136 (14%)

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
            N+ P S +Y ILIDGL   G L +A  L   L    ++ + VAYT++I   C       
Sbjct: 4   RNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCM------ 57

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           A +F              D  +  F  M   G PP      VM+ A  + G L    +L 
Sbjct: 58  ANSF--------------DDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLI 103

Query: 632 AVMIKSGLLPDKFLIN 647
             MI+ G +PD    N
Sbjct: 104 KKMIEDGHVPDVVTYN 119


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 160/568 (28%), Positives = 289/568 (50%), Gaps = 9/568 (1%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G V DA+ +  KM+++ +  ++ TYN++++ L      D  +   + ++      ++ T 
Sbjct: 211 GRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTY 270

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
            ++I+GL +  R  +A   L+E + + + P+ V  N ++  YC++G    A  +   M+ 
Sbjct: 271 GVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMIS 330

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G+ P++ + N LI G C +  ME A     +M   G   +  T++ +     L  +   
Sbjct: 331 NGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDS 390

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A   I ++L++   P+    T+L+ G CQ G   E ++L   +L +GF  N +  + L+ 
Sbjct: 391 ALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIH 450

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C++G  +EA  LL EM   GL  D ++Y+ LI   CK+ KV +  +L  EM  + I P
Sbjct: 451 GLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQP 510

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           + + +  +L GLC    I EA   +     +    D   Y IMIDGY K   + E  +L+
Sbjct: 511 DMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLF 570

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           ++++  +I  + V + +LI  +C+NG + +A RL D ++  G+  ++ TY++ ++     
Sbjct: 571 QEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNI 630

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +     LL EM  + + P  V YT +I G CK  ++ +   +L++M +  V P++ITY
Sbjct: 631 GLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITY 690

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
             +I   CK  +++ A +LLN+M    + P + TYN L +G C  G ++ A  +   +  
Sbjct: 691 TIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMST 750

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMT 574
             ISL  + YTT+I         HK +T
Sbjct: 751 GGISLDDITYTTLIDGW------HKPLT 772



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 157/556 (28%), Positives = 259/556 (46%), Gaps = 41/556 (7%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V   + +++ +C  G  + A  LF  M K G+ P+  +YN +IHGLC  G ++EA +F
Sbjct: 195 PDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQF 254

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M +  V+P  +TY +L  G   L +   A  +++++  +G  P+ V Y  LI GYC+
Sbjct: 255 KEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCR 314

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG----------------------- 252
           IGN+   L++R+ M+S G   N +  + L+   CKS                        
Sbjct: 315 IGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGT 374

Query: 253 ------------RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
                       R D AL  + EM     KP+    ++L+ GLC+  K  +AI+L+  + 
Sbjct: 375 FTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLL 434

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K  + N+    A++ GLCE     EA      ++    + D + YN +I    K G + 
Sbjct: 435 EKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVE 494

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           E  +L  +++ + I P + T+N L++G C  GK+ +A  L    K +G  P A TY   +
Sbjct: 495 EGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMI 554

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + YC+   ++    L QEM T  I    V Y  +I+  C+   ++EA +L +DM   G+ 
Sbjct: 555 DGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIP 614

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
               TY+++I        +  A QLL++M    L P    Y  LI G C  G +   D +
Sbjct: 615 QTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSI 674

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
           L  +  +N+   K+ YT +I  HC  G++  A     +M +KG       Y        L
Sbjct: 675 LQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNA------L 728

Query: 601 SNGFPPDQEICEVMLI 616
           +NGF  + ++ E + +
Sbjct: 729 TNGFCKEGKMEEALKV 744



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 229/505 (45%), Gaps = 50/505 (9%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           +++   L  KG  P + T   L+    +   V+   ++ ++M   G   +V  +S ++++
Sbjct: 147 FELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNA 206

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            C  GR+D+A+ L  +ME VG+ P++VTY+ +I GLCK  ++ +A Q   +M  +R+ P+
Sbjct: 207 FCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPS 266

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +G ++ GL + E   EA      +       + V+YN +IDGY ++GNI  A+Q+  
Sbjct: 267 LVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRD 326

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD------------------------- 402
            +I   ISP+ VT NSLI G+CK+ ++  A  LL+                         
Sbjct: 327 DMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKC 386

Query: 403 ----------TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
                      + L   +P+    T  ++  C+ G     + L   +  K      VT  
Sbjct: 387 RFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSN 446

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I GLC+    +EA +LL++M   G+  D I+YNT+I + CK   + + F+L  +M   
Sbjct: 447 ALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRR 506

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            ++P   TYN+L+ GLC  G ++ A  L    +++        Y  +I  +C    V + 
Sbjct: 507 GIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEG 566

Query: 573 MTFFCQMVEKGFEIS-------IRDY-----TKSFFCM---MLSNGFPPDQEICEVMLIA 617
              F +MV    E +       IR Y      +  F +   M S G P        ++  
Sbjct: 567 EKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHG 626

Query: 618 FHQGGDLGSVFELAAVMIKSGLLPD 642
               G + S  +L   M K GL P+
Sbjct: 627 LSNIGLVDSANQLLDEMRKEGLSPN 651



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 3/178 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPR 61
            Y   G + +A  +   M+   +  +  TY+SL++ L +    D    L D+++      
Sbjct: 591 AYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSP 650

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   + +I G C+  ++      LQE +     P+ ++   +++ +CKLG  + A  L 
Sbjct: 651 NVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLL 710

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
             M + G+ PDA +YN L +G C  G MEEAL+  + M   G+  D ITY+ L  G+H
Sbjct: 711 NEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWH 768


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 164/632 (25%), Positives = 311/632 (49%), Gaps = 42/632 (6%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQ-SRL---QDAILFLQETAGKEFGPSVVSLNAIM 105
           L+D   +  +P   +++S V D + +  SRL     A+  L       F P+V+S NA++
Sbjct: 118 LHDTFHLCSSP---FSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVL 174

Query: 106 SRYCKLGFA-----EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
               +   +     + A+ +F  M++ G+ P+ ++YN++I G+   G +E+ L F   M 
Sbjct: 175 DALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKME 234

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
           + G+ P+ +TY+ L        ++  A  +++ + + G   ++++Y  +I G C  G + 
Sbjct: 235 KEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMS 294

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
           E  +L E M  +G   + + Y+ L++  CK G + + L LL EM   GL P++VTY+ LI
Sbjct: 295 EVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLI 354

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
             +CK   + +A++++++M  + + PN   +  ++ G C+K ++ EA      +I+S   
Sbjct: 355 NCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFS 414

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
             VV YN ++ GY  LG + EAV + R ++E+ + P +V+++++I GFC+  ++  A ++
Sbjct: 415 PSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQM 474

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            + +   G+ P  VTY++ +   C +  +     L +EM  + + P  VTYT +I   C 
Sbjct: 475 KEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCV 534

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             +L +A++L ++M   G  PD +TY+ +I    K    + A +LL +++     P   T
Sbjct: 535 DGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVT 594

Query: 521 YNILID---------------GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           YN LI+               G C+ G +  AD +  ++ + N       Y  +I  H  
Sbjct: 595 YNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSR 654

Query: 566 EGDVHKAMTFFCQMVEKGFEISI-----------RDYTKSFFCMMLSNGFPP----DQEI 610
            G+VHKA   + ++    F               R+        +L N        D ++
Sbjct: 655 GGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKV 714

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            +V++    + G++ +V  +   M K GLLPD
Sbjct: 715 AKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 25/206 (12%)

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII-----RSFCKCKDLRK 501
           +   + +V+K L +   + +A+ LL      G  P  ++YN ++     RS    +D   
Sbjct: 131 SSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDD 190

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A ++   M  + + P   TYN++I G+   GDL+     +  +++  IS   V Y T+I 
Sbjct: 191 AERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLID 250

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQG 621
           A C +  V +AM     M   G   ++  Y        + NG      +C          
Sbjct: 251 ASCKKKKVKEAMALLRAMAVGGVAANLISYNS------VING------LC--------GK 290

Query: 622 GDLGSVFELAAVMIKSGLLPDKFLIN 647
           G +  V EL   M   GL+PD+   N
Sbjct: 291 GRMSEVGELVEEMRGKGLVPDEVTYN 316


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 159/517 (30%), Positives = 261/517 (50%), Gaps = 30/517 (5%)

Query: 136 YNILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           YNI++  LC AG    ALE F  +M R GV P  +TY+ +  G    + +    ++ ++L
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           + +G  PD+VTY  LI   C+ G++EE  +L   M S+G   NV+ YSVL++ +CK GRI
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 255 DEALGLLYEM--EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM--CSKRISPNSFA 310
           DEA  L+ EM  ++  + P+++TY+  + GLCKQ    +A +L   +   S R+SP++  
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
              ++ GLC+   I EA   FD +I    + +V+ YN +++G  K   +  A  +   ++
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-----LEPSAVTYTTFMNAYCE 425
           +K ++P ++T++ L+  FCK  +V +A  LL  +   G     L P  VT+   +   C+
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            GN ++  AL +EM  K + P  +T+  +I GLCK  +++ A  +L+ M  +GV P+ +T
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YN ++   CK   + +A Q L +M      P S TY  L+  LC      +A  L+  L+
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
                   V Y  ++      G   +A+T   +MV KG +                    
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQ-------------------- 463

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           PD           H+ G+L    EL  V++  G+LPD
Sbjct: 464 PDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPD 500



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 146/478 (30%), Positives = 246/478 (51%), Gaps = 10/478 (2%)

Query: 67  SIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           +IV+  LC+      A+ +F  E A     P++V+ N I++  CK         LF  ++
Sbjct: 5   NIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G HPD  +YN LI  LC AG +EEA     DM   G  P+ +TYS+L  G   + +I 
Sbjct: 65  ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRID 124

Query: 186 GAWKVIQKLLIKGSD--PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--NVIAY 241
            A ++IQ++  K  D  P+I+TY   + G C+     E  +L   +     ++  + + +
Sbjct: 125 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 184

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S L+  +CK G+IDEA  +  +M A G  P+++TY+ L+ GLCK DK+ +A  +   M  
Sbjct: 185 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC-----IQDVVLYNIMIDGYVKL 356
           K ++P+   +  ++   C+   + EA      +    C     + D V +NI+I G  K 
Sbjct: 245 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKA 304

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           GN  +A  L+ +++ K + P ++TF +LI G CK G+V  AR +LD +   G+ P+ VTY
Sbjct: 305 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTY 364

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              ++  C+ G I+     L+EM +    P  +TY  ++  LC+  +  +A+QL+ ++  
Sbjct: 365 NALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKS 424

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
            G  PD +TYN ++    K     +A  +L +M     +P S T+     GL  +G+L
Sbjct: 425 FGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNL 482



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/477 (29%), Positives = 226/477 (47%), Gaps = 44/477 (9%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T + +I+GLC+ + L   +   +E   +   P VV+ N ++   CK G  E A+ L  
Sbjct: 37  IVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHG 96

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG------------------- 163
            M   G  P+  +Y++LI+GLC  G ++EA E   +M R                     
Sbjct: 97  DMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCK 156

Query: 164 --------------------VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
                               V PD +T+S L  G     QI  A  V   ++  G  P++
Sbjct: 157 QSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNV 216

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           +TY  L+ G C+   +E    + E M+ +G   +VI YSVL+ + CK+ R+DEAL LL+ 
Sbjct: 217 ITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHG 276

Query: 264 MEAVG-----LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
           M + G     L PD VT++ILI G CK     +A  L+ EM +K + P+    GA++ GL
Sbjct: 277 MASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 336

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C+   +  AR   D +       +VV YN ++ G  K G I EA Q   +++     P  
Sbjct: 337 CKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 396

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           +T+ SL+Y  C+  +  DA +L+  +K  G +P  VTY   ++   + G  ++ + +L+E
Sbjct: 397 ITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEE 456

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           M  K   P   T+     GL +   L   ++LL  +   G+ PD  T ++I+   C+
Sbjct: 457 MVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCR 513



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 221/467 (47%), Gaps = 25/467 (5%)

Query: 203 IVTYTVLICGYCQIGNVEEGLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           +  Y +++   C+ G+    L++ R  M   G    ++ Y+ +++ +CKS  +   + L 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            E+   G  PD+VTY+ LI  LCK   + +A +L+ +M S+   PN   +  ++ GLC+ 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 322 EMITEARMYFDSLIMSNC--IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK--RISPS 377
             I EAR     +   +C  + +++ YN  +DG  K     EA +L R L +   R+SP 
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            VTF++LI G CK G++ +A  + D +   G  P+ +TY   +N  C+   ++R  A+++
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP-----DQITYNTIIRS 492
            M  K + P  +TY+V++   CK  ++ EA++LL  M   G TP     D++T+N +I  
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            CK  +  +A  L  +M   NL+P   T+  LIDGLC  G ++ A  +L  +    +   
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 360

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF---------------EISIRDYTKSFFC 597
            V Y  ++   C  G + +A  F  +MV  G                  S  D       
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 420

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
            + S G+ PD     +++    + G       +   M+  G  PD F
Sbjct: 421 ELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSF 467



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 234/455 (51%), Gaps = 12/455 (2%)

Query: 31  IQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           + TYN+L+ +L     + +   L+ D+       NV T S++I+GLC+  R+ +A   +Q
Sbjct: 72  VVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQ 131

Query: 88  ETAGK--EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH--PDAFSYNILIHGL 143
           E   K  +  P++++ N+ +   CK      A  L   +    L   PD  +++ LI GL
Sbjct: 132 EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 191

Query: 144 CIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
           C  G ++EA    +DM   G  P+ ITY+ L  G     ++  A  +I+ ++ KG  PD+
Sbjct: 192 CKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDV 251

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV-----IAYSVLLSSMCKSGRIDEAL 258
           +TY+VL+  +C+   V+E L+L   M S+G   NV     + +++L++  CK+G  ++A 
Sbjct: 252 ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQAS 311

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L  EM A  L+PD++T+  LI GLCK  +V  A  + + M +  + PN   + A++ GL
Sbjct: 312 ALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGL 371

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C+   I EA  + + ++ S C+ D + Y  ++    +     +A+QL  +L      P  
Sbjct: 372 CKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDT 431

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VT+N L+ G  K+GK   A  +L+ +   G +P + T+    +     GN+   + LL+ 
Sbjct: 432 VTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRV 491

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           +  K + P   T + ++  +C+  KL +   ++++
Sbjct: 492 VLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 198/386 (51%), Gaps = 7/386 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQ--ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           N+ T +  +DGLC+QS   +A   ++          P  V+ + ++   CK G  + A  
Sbjct: 143 NIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACS 202

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F  M+  G  P+  +YN L++GLC A  ME A      M   GV PD ITYS+L   F 
Sbjct: 203 VFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFC 262

Query: 180 LLSQISGAWKVIQKLLIKGSDPDI-----VTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             S++  A +++  +  +G  P++     VT+ +LI G C+ GN E+   L E M+++  
Sbjct: 263 KASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 322

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           + +V+ +  L+  +CK+G+++ A  +L  M  +G+ P++VTY+ L+ GLCK  ++ +A Q
Sbjct: 323 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 382

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
              EM S    P+S  +G+++  LC      +A      L       D V YNI++DG  
Sbjct: 383 FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW 442

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K G   +A+ +  +++ K   P   TF +   G  ++G +A    LL  +   G+ P A 
Sbjct: 443 KSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDAT 502

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEME 440
           T ++ ++  C  G +  + A+++E E
Sbjct: 503 TCSSILDWVCRSGKLDDVKAMIKEFE 528



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 112/216 (51%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L++++       +V T   +IDGLC+  +++ A   L         P+VV+ NA++   C
Sbjct: 313 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLC 372

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           K G  E A      M+  G  PD+ +Y  L++ LC A   ++AL+  +++   G +PD +
Sbjct: 373 KSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTV 432

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           TY+IL  G     +   A  V+++++ KG  PD  T+     G  + GN+   ++L  V+
Sbjct: 433 TYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVV 492

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           L++G   +    S +L  +C+SG++D+   ++ E E
Sbjct: 493 LAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 257/485 (52%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           +LN ++  YCK    + A  +   M K  + PD  ++N+LI     AG ++ A+   + M
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              G++P  +TY+ + KG     +   A +V + +      PD+ ++ +LI G+C++G V
Sbjct: 219 ANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           +E +K  + M  +    +V+++S L+    + G +D A   L EM+ +GL PD V Y+++
Sbjct: 279 KEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMV 338

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I G C+   + +A+++ +EM      P+   +  +L GLC++  + +A    + +     
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGV 398

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             D+  +  +I GY + GN   A+QL+  L+ +R+ P +VT+NSLI G C+ G +A A  
Sbjct: 399 TPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANE 458

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L D +    + P+ +TY+  ++++CE+G ++     L EM  K   P   TY  +IKG C
Sbjct: 459 LWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYC 518

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           +   +++  Q L+ M    V PD IT+NT+I  + K +++  AF + N M    + P + 
Sbjct: 519 RSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAV 578

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYN++I+G    G++++A  +   + +  I   +  Y ++I  H   G+  +A     +M
Sbjct: 579 TYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEM 638

Query: 580 VEKGF 584
           + +GF
Sbjct: 639 IHRGF 643



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 280/517 (54%), Gaps = 7/517 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR--- 61
           V SR G  H A      +   D +V+  T N ++++   T + +D  D + +SE  +   
Sbjct: 131 VLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKT-LEFDGADTV-ISEMEKRCV 188

Query: 62  --NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             +V T++++ID   +   +  AI  +   A +   P +V+ N+++   CK    + AK 
Sbjct: 189 FPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKE 248

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F  M +  + PD  S+NILI G C  G ++EA++F  +M    V PD +++S L   F 
Sbjct: 249 VFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFS 308

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A   ++++   G  PD V YT++I G+C+ G++ E L++R+ M+  G   +V+
Sbjct: 309 RRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVV 368

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ LL+ +CK  R+ +A  LL EME  G+ PDL T++ LI G C+Q     A+QL++ +
Sbjct: 369 TYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTL 428

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             +R+ P+   + +++ G+C K  + +A   +D +     + + + Y+I+ID + + G +
Sbjct: 429 LRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQV 488

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A     ++++K   P+I T+NS+I G+C++G V   ++ L  ++   + P  +T+ T 
Sbjct: 489 EDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTL 548

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ Y +E N+     +   ME + + P  VTY ++I G  +Q  +Q+A ++ + M   G+
Sbjct: 549 IHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGI 608

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
            PD+ TY ++I       + ++AFQL ++M      P
Sbjct: 609 EPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAP 645



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/547 (24%), Positives = 265/547 (48%), Gaps = 21/547 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+  S NA+++   + G+  +A+  + L+L      +A++ NI++H  C     + A   
Sbjct: 121 PASAS-NALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTV 179

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            ++M +  V PD +T+++L         +  A  ++  +  +G  P IVTY  ++ G C+
Sbjct: 180 ISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCK 239

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
               ++  ++   M       +V ++++L+   C+ G + EA+    EM+   + PD+V+
Sbjct: 240 HRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVS 299

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           +S LI    ++ ++  A     EM    + P+   +  ++ G C    ++EA    D ++
Sbjct: 300 FSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMV 359

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C+ DVV YN +++G  K   + +A +L  ++ E+ ++P + TF +LI+G+C+ G   
Sbjct: 360 GFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFE 419

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A +L DT+    L P  VTY + ++  C +G++ +   L  +M  + I P H+TY+++I
Sbjct: 420 NALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILI 479

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
              C++ ++++A   L++M   G  P+  TYN+II+ +C+  +++K  Q L +M   N+ 
Sbjct: 480 DSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVF 539

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   T+N LI G     ++  A  +   +++  +    V Y  II     +G++  A   
Sbjct: 540 PDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRV 599

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
           F  M + G E                    PD+     ++      G+    F+L   MI
Sbjct: 600 FKGMGDSGIE--------------------PDRYTYMSLINGHVTAGNSKQAFQLHDEMI 639

Query: 636 KSGLLPD 642
             G  PD
Sbjct: 640 HRGFAPD 646



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 244/482 (50%), Gaps = 2/482 (0%)

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           S++  N YT +I++   C+      A   + E   +   P VV+ N ++    + G  + 
Sbjct: 151 SDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDA 210

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  L   M   GL P   +YN ++ GLC     ++A E    M +  V PD  +++IL  
Sbjct: 211 AIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIG 270

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE-GLKLREVMLSQGFK 235
           GF  + ++  A K  +++  +   PD+V+++ LI  + + G ++  G  LRE M   G  
Sbjct: 271 GFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLRE-MKGLGLV 329

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            + + Y++++   C++G + EAL +  EM   G  PD+VTY+ L+ GLCKQ ++  A +L
Sbjct: 330 PDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKL 389

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
            NEM  + ++P+      ++ G C +     A   FD+L+      DVV YN +IDG  +
Sbjct: 390 LNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCR 449

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G++ +A +L+  +  + I P+ +T++ LI   C+ G+V DA   LD +   G  P+  T
Sbjct: 450 KGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRT 509

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y + +  YC  GN+++    LQ+M    + P  +T+  +I G  K+  +  A  +   M 
Sbjct: 510 YNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIME 569

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
              V PD +TYN II  F +  +++ A ++   M    +EP   TY  LI+G    G+ K
Sbjct: 570 KEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSK 629

Query: 536 NA 537
            A
Sbjct: 630 QA 631



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/422 (21%), Positives = 173/422 (40%), Gaps = 50/422 (11%)

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P    + +LIR   +  K  +A + +  +   R+   + A  A+L  L        A+  
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           +  ++ S+   +    NIM+  Y K      A  +  ++ ++ + P +VT N LI    +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G V  A  L+D++   GL+P  VTY + +   C+     +   + + M+  ++ P   +
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS 264

Query: 451 YTVVIKGLCKQWKLQEAVQL-----------------------------------LEDMY 475
           + ++I G C+  +++EAV+                                    L +M 
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            +G+ PD + Y  +I  FC+   + +A ++ ++M      P   TYN L++GLC    L 
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLL 384

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF 595
           +A+ LL  ++E  ++     +TT+I  +C +G+   A+  F  ++ +     +  Y    
Sbjct: 385 DAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444

Query: 596 FCMMLSNGFPPDQEICEVM--------------LIAFH-QGGDLGSVFELAAVMIKSGLL 640
             M          E+ + M              LI  H + G +   F     M+K G L
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNL 504

Query: 641 PD 642
           P+
Sbjct: 505 PN 506



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 137/315 (43%), Gaps = 20/315 (6%)

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           R    SL+ S+      +++++I  Y +     EA + +R L++ R+       N+L+  
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAV 131

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
             + G    A+     +     E +A T    +++YC+         ++ EME + + P 
Sbjct: 132 LSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPD 191

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            VT+ V+I    +   +  A+ L++ M   G+ P  +TYN++++  CK +   KA ++  
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFR 251

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M   ++ P   ++NILI G C  G++K A      +Q   ++   V+++ +I      G
Sbjct: 252 TMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRG 311

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           ++  A  +  +M  KG                   G  PD  I  +++  F + G +   
Sbjct: 312 EMDHAGAYLREM--KGL------------------GLVPDGVIYTMVIGGFCRAGSMSEA 351

Query: 628 FELAAVMIKSGLLPD 642
             +   M+  G LPD
Sbjct: 352 LRVRDEMVGFGCLPD 366


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 176/618 (28%), Positives = 307/618 (49%), Gaps = 21/618 (3%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           DI   L +++K S    N   ++ ++ GLC   R+ +A+   +  A K+  P V++  A+
Sbjct: 74  DIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTAL 132

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +   CK G  + A+G+   M+  G  PD  +++ LI GLC  GS E+A     D+ + G+
Sbjct: 133 VHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGM 192

Query: 165 -EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
              DA   +I+ +  +  + +  A KV+  ++ KG  P ++ + ++I G+C+  +++   
Sbjct: 193 GNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAY 252

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           KL EVM+ +G   NV  +++L++ +CK+ R+ EA  LL +M   G  P++VTYS +I GL
Sbjct: 253 KLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGL 312

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CKQ +V  A +L+  M  +   PN   H  ++ GLC+ + I EAR  +  +  + C  D+
Sbjct: 313 CKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDI 372

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS-IVTFNSLIYGFCKNGKVADARRLLD 402
           + YN +IDG  K   + EA QL++ + E  +S +  VT+++L +G+   G++ADA R+  
Sbjct: 373 ITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFS 432

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G  P   TYT+ +  YC+      ++ L++EM +K   P   T + V+ GL +  
Sbjct: 433 MLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGN 492

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM---WLHNLEPTSA 519
             + A+QL + M   G T D + YN ++    +     KA  +L Q+         P+S+
Sbjct: 493 HTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSS 552

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
             + L++ LC  G   +A  LL  + E   +    +Y  ++          +A   F  M
Sbjct: 553 AVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAM 612

Query: 580 VEKG--FEISIRDYTKSFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDL 624
           V  G   EIS  +   S+ C              M   G  PD E C  ++  + + G  
Sbjct: 613 VSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRA 672

Query: 625 GSVFELAAVMIKSGLLPD 642
               +L   M ++GL P+
Sbjct: 673 DLARKLLEEMTEAGLEPN 690



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 219/462 (47%), Gaps = 4/462 (0%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           ++VI+G C+   L  A   L+    K   P+V +   +++  CK      A+ L   M+ 
Sbjct: 236 NLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVM 295

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  P+  +Y+ +I+GLC  G +++A E    M R    P+ +T++IL  G     +I  
Sbjct: 296 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 355

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL-NVIAYSVLL 245
           A ++  ++   G  PDI+TY  LI G C+   V+E  +L + +   G    N + YS L 
Sbjct: 356 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 415

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
                 GR+ +A  +   +   G  PDL TY+ LI   CK  +  + ++L  EM SK   
Sbjct: 416 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 475

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P      A+L GL E      A   FDS+    C  D ++YN++++G  +     +A+ +
Sbjct: 476 PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAV 535

Query: 366 YRQLIEKR---ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             Q+I+KR    +PS    ++L+   C+ GK  DA++LL  +   G   +  +Y   ++ 
Sbjct: 536 LEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSG 595

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
                       + + M +    P   T  VVI  LC   K+ +A +L++ M  +G  PD
Sbjct: 596 LSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPD 655

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
             T NT+I  +CK      A +LL +M    LEP   T+++L
Sbjct: 656 IETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 217/483 (44%), Gaps = 56/483 (11%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI------ 254
           P+  TY +LI G+   G+++  ++L E M S GF+ N + ++ L+  +C +GR+      
Sbjct: 55  PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEH 114

Query: 255 ----------------------------DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
                                       DEA G+L EM A G  PD VT+S LI GLCK 
Sbjct: 115 FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKF 174

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE-ARMYFDSLIMSNCIQDVVL 345
               +A ++  ++  + +  +  A   I+  LC K    E A      +I       V++
Sbjct: 175 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 234

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           +N++I+G+ K  ++  A +L   +IEK   P++ TF  LI G CK  +V +A++LL+ + 
Sbjct: 235 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 294

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           + G  P+ VTY+T +N  C++G +     L Q ME +   P  VT+ ++I GLCK  +++
Sbjct: 295 MGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIE 354

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA-TYNIL 524
           EA QL   M   G  PD ITYN++I   CK   + +AFQL   +    +   +A TY+ L
Sbjct: 355 EARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTL 414

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             G    G + +A  +   L +   S     YT++I  +C                    
Sbjct: 415 FHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYC-------------------- 454

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           + S           M S GFPP       +L    +G       +L   M   G   D  
Sbjct: 455 KTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDAL 514

Query: 645 LIN 647
           + N
Sbjct: 515 IYN 517



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 140/326 (42%), Gaps = 38/326 (11%)

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           + L+ +    R+  N F+    L  LC      EA   F + +   C+ +   Y I+I G
Sbjct: 7   VLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRG 66

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           +   G++  A+QL  ++       + V   +L+ G C  G+V +A      +      P 
Sbjct: 67  FSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPD 125

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            +TYT  ++A C+ G       +L+EM  +   P  VT++ +I GLCK    ++A ++LE
Sbjct: 126 VMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLE 185

Query: 473 DMY------------------------------VIGV------TPDQITYNTIIRSFCKC 496
           D+                               V+GV      TP  + +N +I  FCK 
Sbjct: 186 DVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKA 245

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
           KDL  A++LL  M      P   T+ ILI GLC    +  A  LL  +     S   V Y
Sbjct: 246 KDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTY 305

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEK 582
           +T+I   C +G V  A   F Q++E+
Sbjct: 306 STVINGLCKQGQVDDAYELF-QLMER 330



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 124/284 (43%), Gaps = 20/284 (7%)

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           E V L+      R+  ++ + N  +   C+  +  +A  L          P+  TY   +
Sbjct: 5   ELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILI 64

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             +   G++   + LL+EM++       V +T ++KGLC   ++ EA++    M      
Sbjct: 65  RGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCA 123

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +TY  ++ + CK     +A  +L +M      P + T++ LIDGLC  G  + A  +
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRV 183

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
           L  + +  +  +  A+ TII+  C                    + +  +       +++
Sbjct: 184 LEDVIQRGMGNSDAAFETIIQRLCN-------------------KYNSVELASKVLGVVI 224

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           + GF P   +  +++  F +  DL S ++L  VMI+ G +P+ F
Sbjct: 225 AKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVF 268



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 3/210 (1%)

Query: 38  LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGK---EF 94
           L+   HT+    L+D +       +    ++V++G+ + S+   A+  L++   K   +F
Sbjct: 488 LFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKF 547

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
            PS  +++A++   C++G  + AK L   M + G      SYN L+ GL      +EA +
Sbjct: 548 NPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQ 607

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
               M   G  P+  T +++       +++  A++++Q++   G  PDI T   LI GYC
Sbjct: 608 VFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYC 667

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + G  +   KL E M   G + N   + +L
Sbjct: 668 KSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 33  TYNSLLYNL---------RHTDIMWDLYDDIKVSETPRNVYTNSI--VIDGLCQQSRLQD 81
           T ++L+YNL         +H   +  L   I   +   N  ++++  +++ LCQ  +  D
Sbjct: 510 TDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDD 569

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           A   L + + + F  +V S N ++S   +L   + A  +F  M+  G  P+  + N++I 
Sbjct: 570 AKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVIS 629

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
            LC A  +++A E    M + G  PD  T + L  G+    +   A K+++++   G +P
Sbjct: 630 WLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEP 689

Query: 202 DIVTYTVLIC 211
           +  T+ +L C
Sbjct: 690 NDTTHDLLEC 699


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 168/518 (32%), Positives = 264/518 (50%), Gaps = 9/518 (1%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I++DG C   R+   + +  +   +   P+V +   +M   C +   + A  L   M K+
Sbjct: 179 ILVDGDC--PRVAPNVFY--DMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKH 234

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  P++  Y  LIH LC    + EAL+   DM     EPD  T++ +  G     +I  A
Sbjct: 235 GCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEA 294

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            K++ ++L++G   D +TY  L+ G C++G V+E       +L++    N + Y+ L+S 
Sbjct: 295 AKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEA----RALLNKIPNPNTVLYNTLISG 350

Query: 248 MCKSGRIDEALGLLYE-MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
              SGR +EA  LLY  M   G +PD  T++I+I GL K+  +  A++L NEM +KR  P
Sbjct: 351 YVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEP 410

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N   +  ++ G C++  + EA    +S+       + V YN +I    K GNI EA+QL+
Sbjct: 411 NVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLF 470

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++  K   P I TFNSLI G CKN K+ +A  L   + L G+  + VTY T ++A+   
Sbjct: 471 GEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMR 530

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
            +IQ+   L+ EM  +     ++TY  +IK LCK   +++ + L E+M   G+ P  I+ 
Sbjct: 531 DSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISC 590

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           N +I   C+   +  A + L  M    L P   TYN LI+GLC  G ++ A  L   LQ 
Sbjct: 591 NILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQS 650

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             I    + Y T+I  HC EG  + A     + V+ GF
Sbjct: 651 EGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGF 688



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 159/542 (29%), Positives = 273/542 (50%), Gaps = 10/542 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPR 61
           Y + G+   A  ++  M  +     + ++YN +L  L   D   +  +++ D+       
Sbjct: 144 YGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSP 203

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            VYT  +V+  LC  S +  A   L++ A     P+ V    ++   C+      A  L 
Sbjct: 204 TVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLL 263

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M      PD  ++N +IHGLC AG + EA +  + M   G   DA+TY  L  G   +
Sbjct: 264 EDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRM 323

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQGFKLNVIA 240
            Q+  A  ++ K+     +P+ V Y  LI GY   G  EE   L    M+  G++ +   
Sbjct: 324 GQVDEARALLNKI----PNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYT 379

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           +++++  + K G +  AL LL EM A   +P+++TY+ILI G CKQ ++ +A ++ N M 
Sbjct: 380 FNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMS 439

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +K +S N+  +  ++  LC+   I EA   F  +    C  D+  +N +I+G  K   + 
Sbjct: 440 AKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKME 499

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+ LY  +  + +  + VT+N+L++ F     +  A +L+D +   G     +TY   +
Sbjct: 500 EALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLI 559

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
            A C+ G +++ L L +EM  K I PT ++  ++I GLC+  K+ +A++ L+DM   G+T
Sbjct: 560 KALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLT 619

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +TYN++I   CK   +++A  L N++    + P + TYN LI   C  G   +A CL
Sbjct: 620 PDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDA-CL 678

Query: 541 LV 542
           L+
Sbjct: 679 LL 680



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 234/435 (53%), Gaps = 5/435 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T + VI GLC+  R+ +A   L     + F    ++   +M   C++G  + A+ L 
Sbjct: 274 DVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARAL- 332

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT-NDMGRHGVEPDAITYSILAKGFHL 180
              L    +P+   YN LI G   +G  EEA +   N+M   G EPDA T++I+  G   
Sbjct: 333 ---LNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVK 389

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A +++ +++ K  +P+++TYT+LI G+C+ G +EE  ++   M ++G  LN + 
Sbjct: 390 KGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVG 449

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+ ++CK G I+EAL L  EM   G KPD+ T++ LI GLCK  K+ +A+ LY++M 
Sbjct: 450 YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF 509

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            + +  N+  +  ++     ++ I +A    D ++   C  D + YN +I    K G + 
Sbjct: 510 LEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVE 569

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           + + L+ +++ K I P+I++ N LI G C+ GKV DA + L  +   GL P  VTY + +
Sbjct: 570 KGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLI 629

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N  C+ G++Q    L  +++++ I P  +TY  +I   C +    +A  LL      G  
Sbjct: 630 NGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFI 689

Query: 481 PDQITYNTIIRSFCK 495
           P+++T++ +I    K
Sbjct: 690 PNEVTWSILINYIVK 704



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 158/557 (28%), Positives = 265/557 (47%), Gaps = 21/557 (3%)

Query: 104 IMSRYCKLGFAEVAKGLFCLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
           IM  Y K G    A  L   M   Y   P   SYN+++  L        A     DM   
Sbjct: 140 IMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSR 199

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           GV P   T+ ++ K   ++S++  A  +++ +   G  P+ V Y  LI   C+   V E 
Sbjct: 200 GVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEA 259

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           L+L E M     + +V  ++ ++  +C++GRI EA  LL  M   G   D +TY  L+ G
Sbjct: 260 LQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHG 319

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR-MYFDSLIMSNCIQ 341
           LC+  +V +A  L N    K  +PN+  +  ++ G        EA+ + +++++++    
Sbjct: 320 LCRMGQVDEARALLN----KIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEP 375

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D   +NIMIDG VK G +  A++L  +++ KR  P+++T+  LI GFCK G++ +A  ++
Sbjct: 376 DAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIV 435

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           +++   GL  + V Y   + A C++GNI+  L L  EM  K   P   T+  +I GLCK 
Sbjct: 436 NSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKN 495

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            K++EA+ L  DM++ GV  + +TYNT++ +F     +++AF+L+++M        + TY
Sbjct: 496 HKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITY 555

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N LI  LC  G ++    L   +    I  T ++   +I   C  G V+ A+ F   M+ 
Sbjct: 556 NGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIH 615

Query: 582 KGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
           +G    I  Y                 + F  + S G  PD      ++      G    
Sbjct: 616 RGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFND 675

Query: 627 VFELAAVMIKSGLLPDK 643
              L    + SG +P++
Sbjct: 676 ACLLLYKGVDSGFIPNE 692



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 200/418 (47%), Gaps = 70/418 (16%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTY--------------------------NSLLYNL 41
           R G +H+A  ++ +M          TY                          N++LYN 
Sbjct: 287 RAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNT 346

Query: 42  ---------RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGK 92
                    R  +    LY+++ ++    + YT +I+IDGL ++  L  A+  L E   K
Sbjct: 347 LISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAK 406

Query: 93  EFGPSVVSLNAIMSRYCKLGFAE---------VAKG------------------------ 119
            F P+V++   +++ +CK G  E          AKG                        
Sbjct: 407 RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEA 466

Query: 120 --LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             LF  M   G  PD +++N LI+GLC    MEEAL   +DM   GV  + +TY+ L   
Sbjct: 467 LQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHA 526

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F +   I  A+K++ ++L +G   D +TY  LI   C+ G VE+GL L E ML +G    
Sbjct: 527 FLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPT 586

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +I+ ++L+S +C++G++++AL  L +M   GL PD+VTY+ LI GLCK   V +A  L+N
Sbjct: 587 IISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFN 646

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           ++ S+ I P++  +  ++   C + M  +A +     + S  I + V ++I+I+  VK
Sbjct: 647 KLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 138/455 (30%), Positives = 254/455 (55%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T++++ID   +   +  AI  +   A K   P +V+ N+++   CK    + AK +F
Sbjct: 191 DVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVF 250

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M +  + PD  S+NILI G C  G +EEA++F  +M + GV PD +++S L   F   
Sbjct: 251 RAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTR 310

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A   ++++   G  PD V YT++I G+C+ G++ E L++R+ M+  G   +V+ Y
Sbjct: 311 GKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTY 370

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL+ +CK  R+ +A  LL EM+  G+ PDL T++ LI G C+     KA+QL++ +  
Sbjct: 371 NTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLH 430

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +R+ P+  A+ +++ G+C K  + +A   +D +       + V Y+I+ID + + G + E
Sbjct: 431 QRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEE 490

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A     +++ K   P+I+T+NS+I G+C++G V   ++ L  +    + P  +T+ T ++
Sbjct: 491 AFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIH 550

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            Y +E N+     +   ME + + P  VTY ++I G  +Q  ++EA ++ + M   G+ P
Sbjct: 551 GYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEP 610

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           D+ TY ++I       + ++AFQL ++M      P
Sbjct: 611 DRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 261/533 (48%), Gaps = 20/533 (3%)

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           + G+  +A+  + L+L      +A++ NI++H  C +   ++A    ++M +  V PD +
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           T+++L         +  A  ++  +  KG  P IVT+  ++ G C+    ++  ++   M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
                  +V ++++L+   C+ G ++EA+    EM+  G+ PD+V++S LI     + K+
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKM 313

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             A     EM    + P+   +  ++ G C    ++EA    D ++   C+ DVV YN +
Sbjct: 314 DHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTL 373

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           ++G  K   + +A +L  ++ E+ ++P + TF +LI+G+C++G    A +L DT+    L
Sbjct: 374 LNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL 433

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P  V Y + ++  C +G++ +   L  +M  + I P HVTY+++I   C++ +++EA  
Sbjct: 434 RPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFG 493

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
            L++M   G  P+ +TYN+II+ +C+  +++K  Q L +M   N+ P   T+N LI G  
Sbjct: 494 FLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYI 553

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
              ++  A  +   +++  +    V Y  II     +G++ +A   F +M   G E    
Sbjct: 554 KEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIE---- 609

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                           PD+     ++      G+    F+L   M+  G  PD
Sbjct: 610 ----------------PDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 243/481 (50%)

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           S++  N YT +I++   C+      A   + E   +   P VV+ N ++    + G  + 
Sbjct: 151 SDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDA 210

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  L   M   GL P   ++N ++ GLC     ++A E    M +  V PD  +++IL  
Sbjct: 211 AIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIG 270

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           GF  + ++  A K  +++  +G  PD+V+++ LI  +   G ++        M   G   
Sbjct: 271 GFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVP 330

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + + Y++++   C++G + EAL +  EM  +G  PD+VTY+ L+ GLCKQ ++  A +L 
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELL 390

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           NEM  + ++P+      ++ G C      +A   FD+L+      DVV YN +IDG  + 
Sbjct: 391 NEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRK 450

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G++ +A +L+  +  + I P+ VT++ LI   C+ G+V +A   LD +   G  P+ +TY
Sbjct: 451 GDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTY 510

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            + +  YC  GN+++    LQ+M    I P  +T+  +I G  K+  +  A  +   M  
Sbjct: 511 NSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEK 570

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             V PD +TYN II  F +  ++ +A ++  +M    +EP   TY  LI+G    G+ K 
Sbjct: 571 EMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKE 630

Query: 537 A 537
           A
Sbjct: 631 A 631



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 223/444 (50%), Gaps = 18/444 (4%)

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
            EE  +L   +LS   ++N    ++++ S CKS   D+A  ++ EME   + PD+VT+++
Sbjct: 141 AEEAYRL---VLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNV 197

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           LI    +   V  AI L + M +K + P      ++L GLC+     +A+  F ++   +
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCS 257

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              DV  +NI+I G+ ++G + EA++ Y+++ ++ ++P +V+F+ LI  F   GK+  A 
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAA 317

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
             L  +K  GL P  V YT  +  +C  G++   L +  EM      P  VTY  ++ GL
Sbjct: 318 AYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGL 377

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CKQ +L +A +LL +M   GVTPD  T+ T+I  +C+  +  KA QL + +    L P  
Sbjct: 378 CKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDV 437

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
             YN LIDG+C  GDL  A+ L   +    I    V Y+ +I +HC +G V +A  F  +
Sbjct: 438 VAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDE 497

Query: 579 MVEKG-------FEISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           MV KG       +   I+ Y +S        F   M+ +   PD      ++  + +  +
Sbjct: 498 MVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEEN 557

Query: 624 LGSVFELAAVMIKSGLLPDKFLIN 647
           +   F +  +M K  + PD    N
Sbjct: 558 MHGAFNVFNIMEKEMVQPDAVTYN 581



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 168/371 (45%), Gaps = 67/371 (18%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + R G + +A+ V  +M  L     + TYN+LL                           
Sbjct: 342 FCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL--------------------------- 374

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
                +GLC+Q RL DA   L E   +   P + +   ++  YC+ G  E A  LF  +L
Sbjct: 375 -----NGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLL 429

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
              L PD  +YN LI G+C  G + +A E  +DM    + P+ +TYSIL        Q+ 
Sbjct: 430 HQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVE 489

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A+  + +++ KG+ P+I+TY  +I GYC+ GNV++G +  + M+      N++      
Sbjct: 490 EAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQD----NIL------ 539

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
                                    PDL+T++ LI G  K++ +H A  ++N M  + + 
Sbjct: 540 -------------------------PDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQ 574

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P++  +  I+ G  E+  + EA   F  +  S    D   Y  +I+G+V  GN  EA QL
Sbjct: 575 PDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQL 634

Query: 366 YRQLIEKRISP 376
           + +++ +  +P
Sbjct: 635 HDEMMHRGFAP 645


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 175/618 (28%), Positives = 307/618 (49%), Gaps = 21/618 (3%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           DI   L +++K +    N   ++ ++ GLC   R+ +A+   +  A K+  P V++  A+
Sbjct: 26  DIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTAL 84

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +   CK G  + A+G+   M+  G  PD  +++ LI GLC  GS E+A     D+ + G+
Sbjct: 85  VHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGM 144

Query: 165 -EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
              DA   +I+ +  +  + +  A KV+  ++ KG  P ++ + ++I G+C+  +++   
Sbjct: 145 GNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAY 204

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           KL EVM+ +G   NV  +++L++ +CK+ R+ EA  LL +M   G  P++VTYS +I GL
Sbjct: 205 KLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGL 264

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CKQ +V  A +L+  M  +   PN   H  ++ GLC+ + I EAR  +  +  + C  D+
Sbjct: 265 CKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDI 324

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS-IVTFNSLIYGFCKNGKVADARRLLD 402
           + YN +IDG  K   + EA QL++ + E  +S +  VT+++L +G+   G++ADA R+  
Sbjct: 325 ITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFS 384

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G  P   TYT+ +  YC+      ++ L++EM +K   P   T + V+ GL +  
Sbjct: 385 MLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGN 444

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM---WLHNLEPTSA 519
             + A+QL + M   G T D + YN ++    +     KA  +L Q+         P+S+
Sbjct: 445 HTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSS 504

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
             + L++ LC  G   +A  LL  + E   +    +Y  ++          +A   F  M
Sbjct: 505 AVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAM 564

Query: 580 VEKG--FEISIRDYTKSFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDL 624
           V  G   EIS  +   S+ C              M   G  PD E C  ++  + + G  
Sbjct: 565 VSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRA 624

Query: 625 GSVFELAAVMIKSGLLPD 642
               +L   M ++GL P+
Sbjct: 625 DLARKLLEEMTEAGLEPN 642



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 219/462 (47%), Gaps = 4/462 (0%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           ++VI+G C+   L  A   L+    K   P+V +   +++  CK      A+ L   M+ 
Sbjct: 188 NLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVT 247

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  P+  +Y+ +I+GLC  G +++A E    M R    P+ +T++IL  G     +I  
Sbjct: 248 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 307

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL-NVIAYSVLL 245
           A ++  ++   G  PDI+TY  LI G C+   V+E  +L + +   G    N + YS L 
Sbjct: 308 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 367

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
                 GR+ +A  +   +   G  PDL TY+ LI   CK  +  + ++L  EM SK   
Sbjct: 368 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 427

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P      A+L GL E      A   FDS+    C  D ++YN++++G  +     +A+ +
Sbjct: 428 PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAV 487

Query: 366 YRQLIEKR---ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             Q+I+KR    +PS    ++L+   C+ G+  DA++LL  +   G   +  +Y   ++ 
Sbjct: 488 LEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSG 547

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
                       + + M +    P   T  VVI  LC   K+ +A +L++ M  +G  PD
Sbjct: 548 LSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPD 607

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
             T NT+I  +CK      A +LL +M    LEP   T+++L
Sbjct: 608 IETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 216/483 (44%), Gaps = 56/483 (11%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI------ 254
           P+  TY +LI G+   G+++  ++L E M S GF+ N + ++ L+  +C +GR+      
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 255 ----------------------------DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
                                       DEA G+L EM A G  PD VT+S LI GLCK 
Sbjct: 67  FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF 126

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE-ARMYFDSLIMSNCIQDVVL 345
               +A ++  ++  + +  +  A   I+  LC K    E A      +I       V++
Sbjct: 127 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 186

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           +N++I+G+ K  ++  A +L   +IEK   P++ TF  LI G CK  +V +A++LL+ + 
Sbjct: 187 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 246

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             G  P+ VTY+T +N  C++G +     L Q ME +   P  VT+ ++I GLCK  +++
Sbjct: 247 TGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIE 306

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA-TYNIL 524
           EA QL   M   G  PD ITYN++I   CK   + +AFQL   +    +   +A TY+ L
Sbjct: 307 EARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTL 366

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             G    G + +A  +   L +   S     YT++I  +C                    
Sbjct: 367 FHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYC-------------------- 406

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           + S           M S GFPP       +L    +G       +L   M   G   D  
Sbjct: 407 KTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDAL 466

Query: 645 LIN 647
           + N
Sbjct: 467 IYN 469



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 123/280 (43%), Gaps = 38/280 (13%)

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           C+ +   Y I+I G+   G++  A+QL  ++       + V   +L+ G C  G+V +A 
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
                +      P  +TYT  ++A C+ G       +L+EM  +   P  VT++ +I GL
Sbjct: 65  EHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123

Query: 459 CKQWKLQEAVQLLEDM------------------------------YVIGV------TPD 482
           CK    ++A ++LED+                               V+GV      TP 
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            + +N +I  FCK KDL  A++LL  M      P   T+ ILI GLC    +  A  LL 
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            +     S   V Y+T+I   C +G V  A   F Q++E+
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELF-QLMER 282



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 6/280 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSET---PRN 62
           Y+  G + DA  + + + +      + TY SL+     T    ++ + ++   +   P  
Sbjct: 370 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 429

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI---MSRYCKLGFAEVAKG 119
           V T S V+ GL + +  + AI      A +      +  N +   M+R  K   A     
Sbjct: 430 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLE 489

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
                     +P + + + L+  LC  G  ++A +  + M   G      +Y+ L  G  
Sbjct: 490 QVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLS 549

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
            L +   A +V + ++  G  P+I T  V+I   C    V++  +L + M   G   ++ 
Sbjct: 550 RLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIE 609

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
             + L+   CKSGR D A  LL EM   GL+P+  T+ +L
Sbjct: 610 TCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 33  TYNSLLYNL---------RHTDIMWDLYDDIKVSETPRNVYTNSI--VIDGLCQQSRLQD 81
           T ++L+YNL         +H   +  L   I   +   N  ++++  +++ LCQ  R  D
Sbjct: 462 TDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDD 521

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           A   L + + + F  +V S N ++S   +L   + A  +F  M+  G  P+  + N++I 
Sbjct: 522 AKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVIS 581

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
            LC A  +++A E    M + G  PD  T + L  G+    +   A K+++++   G +P
Sbjct: 582 WLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEP 641

Query: 202 DIVTYTVLIC 211
           +  T+ +L C
Sbjct: 642 NDTTHDLLEC 651


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 171/609 (28%), Positives = 287/609 (47%), Gaps = 44/609 (7%)

Query: 8   RTGMVH----DAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETP 60
           R+G+V     DAV +  +M     +  +  ++   S++   +  D++ DL   +++    
Sbjct: 45  RSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIA 104

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N+YT SI+I+  C+  +L                               L F+ + K  
Sbjct: 105 HNLYTLSIMINCCCRCRKLS------------------------------LAFSAMGK-- 132

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              ++K G  PD  +++ LI+GLC+ G + EALE  + M   G +P  IT + L  G  L
Sbjct: 133 ---IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             ++S A  +I +++  G  P+ VTY  ++   C+ G     ++L   M  +  KL+ + 
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS+++  +CK G +D A  L  EME  G K D++ Y+ LIRG C   +     +L  +M 
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            ++I+P+  A  A++    ++  + EA      +I      D V Y  +IDG+ K   + 
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  +   ++ K   P+I TFN LI G+CK   + D   L   + L G+    VTY T +
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             +CE G ++    L QEM ++ + P  V+Y +++ GLC   + ++A+++ E +    + 
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            D   YN II   C    +  A+ L   + L  ++P   TYNI+I GLC  G L  AD L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI--SIRDYTKSFFCM 598
              ++E   S     Y  +I+AH  EGD  K+     ++   GF +  S   +  S    
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLAR 609

Query: 599 MLSNGFPPD 607
           ML  G  PD
Sbjct: 610 MLKAGHEPD 618



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 252/526 (47%), Gaps = 20/526 (3%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  M +    P    ++ L   +      +  L+    M   G+  +  T SI+  
Sbjct: 56  AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
                 ++S A+  + K++  G +PD VT++ LI G C  G V E L+L + M+  G K 
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +I  + L++ +C +G++ +A+ L+  M   G +P+ VTY  +++ +CK  +   A++L 
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M  ++I  ++  +  I+ GLC+   +  A   F+ + +     D+++Y  +I G+   
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   +  +L R +I+++I+P +V F++LI  F K GK+ +A  L   +   G+ P  VTY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           T+ ++ +C+E  + +   +L  M +K  GP   T+ ++I G CK   + + ++L   M +
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            GV  D +TYNT+I+ FC+   L  A +L  +M    + P   +Y IL+DGLC NG+ + 
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFF 596
           A  +   +++  + L    Y  II   C    V  A   FC +                 
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP---------------- 519

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                 G  PD +   +M+    + G L     L   M + G  P+
Sbjct: 520 ----LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 260/544 (47%), Gaps = 28/544 (5%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYT 65
            G V DAV +I +M E   + +  TY  +L  +     T +  +L   ++  +   +   
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            SI+IDGLC+   L +A     E   K F   ++    ++  +C  G  +    L   M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K  + PD  +++ LI      G + EA E   +M + G+ PD +TY+ L  GF   +Q+ 
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  ++  ++ KG  P+I T+ +LI GYC+   +++GL+L   M  +G   + + Y+ L+
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              C+ G+++ A  L  EM +  ++PD+V+Y IL+ GLC   +  KA++++ ++   ++ 
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
            +   +  I+ G+C    + +A   F SL +     DV  YNIMI G  K G++ EA  L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL---------------- 409
           +R++ E   SP+  T+N LI      G    + +L++ IK  G                 
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLAR 609

Query: 410 ------EPSAVTYTTFMNAYC--EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
                 EP   T+TT +  +C  E  ++     L + M+     P  VTY  VIKGL   
Sbjct: 610 MLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNG 669

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
             + +   +L+ M+  G  P+ +T +T I   CK +DL  +  LL +   ++ E  +   
Sbjct: 670 NMISQVPGVLDQMFERGCQPNAVTKSTFISGLCK-QDLHGSAILLLRKMENDNEDVTTKK 728

Query: 522 NILI 525
            ILI
Sbjct: 729 KILI 732



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 146/321 (45%), Gaps = 27/321 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           Y +  ++ D + +  KM    +     TYN+L+     L   ++  +L+ ++       +
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + +  I++DGLC     + A+   ++    +    +   N I+   C     + A  LFC
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK------ 176
            +   G+ PD  +YNI+I GLC  GS+ EA      M   G  P+  TY+IL +      
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEG 576

Query: 177 ---------------GFHL-LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC--QIGN 218
                          GF +  S +  A   + ++L  G +PD+ T+T L+  +C  +  +
Sbjct: 577 DATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENAS 636

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           V +   L + M + G+K NV+ Y+ ++  +     I +  G+L +M   G +P+ VT S 
Sbjct: 637 VYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKST 696

Query: 279 LIRGLCKQDKVHKAIQLYNEM 299
            I GLCKQD    AI L  +M
Sbjct: 697 FISGLCKQDLHGSAILLLRKM 717


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 159/579 (27%), Positives = 284/579 (49%), Gaps = 67/579 (11%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++IDG C+  ++ DA+  L E        ++   N++++ YCK G    A+G+   M+ +
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            L PD++SYN L+ G C  G   EA    + M + G+EP  +TY+ L KG   +     A
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++   ++ +G  PD V Y+ L+ G  ++ N E    L + +L++GF  + I ++ ++S 
Sbjct: 457 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 516

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA--------------- 292
           +CK G++ EA  +  +M+ +G  PD +TY  LI G CK   V +A               
Sbjct: 517 LCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPS 576

Query: 293 IQLYN--------------------EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           I++YN                    EM  + ++PN   +GA++ G C++ M+ +A   + 
Sbjct: 577 IEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYF 636

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE--------------------K 372
            +  +    ++++ + M+ G  +LG I EA  L +++++                    +
Sbjct: 637 EMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQ 696

Query: 373 RIS------------PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +I+            P+ + +N  I G CK GKV DARR    + L G  P   TY T +
Sbjct: 697 KIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLI 756

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + Y   GN+     L  EM  + + P  VTY  +I GLCK   +  A +L   ++  G+ 
Sbjct: 757 HGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLF 816

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ +TYNT+I  +CK  ++  AF+L ++M    + P+  TY+ LI+GLC +GD++ +  L
Sbjct: 817 PNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKL 876

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           L  + +  +    + Y T+++ +   G++ K    +  M
Sbjct: 877 LNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 174/654 (26%), Positives = 309/654 (47%), Gaps = 65/654 (9%)

Query: 45  DIMWD----LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGK-EFGPSVV 99
           +++WD    +Y +   S T  ++     V  GL + +      L++ +  GK    PS+ 
Sbjct: 139 NVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNA------LYVFDNMGKCGRIPSLR 192

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           S N++++   K G    A  ++  M++ G+ PD F  +I+++  C  G ++EA  F   M
Sbjct: 193 SCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKM 252

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              GVEP+ +TY  L  G+  L  +  A  V++ +  KG   ++VTYT+LI GYC+   +
Sbjct: 253 ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKM 312

Query: 220 EEGLK-LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           +E  K LR +        +  AY VL+   C++G+ID+A+ LL EM  +GLK +L   + 
Sbjct: 313 DEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNS 372

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           LI G CK+ ++H+A  +   M    + P+S+++  +L G C +   +EA    D ++   
Sbjct: 373 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 432

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP---------------------- 376
               V+ YN ++ G  ++G   +A+Q++  ++++ ++P                      
Sbjct: 433 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAS 492

Query: 377 -------------SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
                        S +TFN++I G CK GK+ +A  + D +K  G  P  +TY T ++ Y
Sbjct: 493 TLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 552

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+  N+ +   +   ME + I P+   Y  +I GL K  +L E   LL +M + G+TP+ 
Sbjct: 553 CKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNI 612

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TY  +I  +CK   L KAF    +M  + L       + ++ GL   G +  A+ L+  
Sbjct: 613 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 672

Query: 544 LQEHNISL-------TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR------- 589
           + +H           + + Y  I K   +  +  K       +V   + I+I        
Sbjct: 673 MVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIV---YNIAIAGLCKTGK 729

Query: 590 -DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            D  + FF M+   GF PD      ++  +   G++   F L   M++ GL+P+
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 783



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 149/522 (28%), Positives = 259/522 (49%), Gaps = 12/522 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI------MWDLYDDIKVSET 59
           Y R G   +A  +  KM +  ++ ++ TYN+LL  L           +W L   +K    
Sbjct: 412 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLM--MKRGVA 469

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P  V   S ++DGL +    + A    ++   + F  S ++ N ++S  CK+G    A+ 
Sbjct: 470 PDEV-GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE 528

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F  M   G  PD  +Y  LI G C A ++ +A +    M R  + P    Y+ L  G  
Sbjct: 529 IFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLF 588

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++     ++ ++ I+G  P+IVTY  LI G+C+ G +++       M   G   N+I
Sbjct: 589 KSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANII 648

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
             S ++S + + GRIDEA  L+ +M   G  PD   +   ++   +   + K     +E 
Sbjct: 649 ICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDES 705

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
           C   + PN+  +   + GLC+   + +AR +F  L +   + D   Y  +I GY   GN+
Sbjct: 706 CKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNV 765

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA +L  +++ + + P+IVT+N+LI G CK+  V  A+RL   +   GL P+ VTY T 
Sbjct: 766 DEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTL 825

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ YC+ GN+     L  +M  + I P+ VTY+ +I GLCK   ++ +++LL  M   GV
Sbjct: 826 IDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
               I Y T+++ + +  +++K  +L + M +  L  T+ ++
Sbjct: 886 DSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISH 927



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 191/413 (46%), Gaps = 37/413 (8%)

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           Q F+ NV +Y  L+  + +    DE    L ++       DL  +    RG    D++  
Sbjct: 96  QNFRPNVKSYCKLVHILSRGRMYDETRAYLNQL------VDLCKFKD--RGNVIWDEL-- 145

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
            + +Y E      SP  F    IL    EK +   A   FD++     I  +   N +++
Sbjct: 146 -VGVYREFA---FSPTVF--DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLN 199

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
             VK G    A  +Y+Q+I   I P +   + ++  FCK+GKV +A   +  ++  G+EP
Sbjct: 200 NLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEP 259

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + VTY + +N Y   G+++    +L+ M  K +    VTYT++IKG CKQ K+ EA ++L
Sbjct: 260 NIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVL 319

Query: 472 EDMY-VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
             M     + PD+  Y  +I  +C+   +  A +LL++M    L+      N LI+G C 
Sbjct: 320 RGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCK 379

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            G++  A+ ++  + + N+     +Y T++  +C EG   +A     +M+++G E ++  
Sbjct: 380 RGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLT 439

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           Y                + +C V        G      ++  +M+K G+ PD+
Sbjct: 440 YNTLL------------KGLCRV--------GAFDDALQIWHLMMKRGVAPDE 472



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/347 (22%), Positives = 143/347 (41%), Gaps = 37/347 (10%)

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +   PN  ++  ++  L    M  E R Y + L+     +D    N++ D         E
Sbjct: 96  QNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKD--RGNVIWD---------E 144

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            V +YR+      SP++  F+ ++  + + G   +A  + D +   G  PS  +  + +N
Sbjct: 145 LVGVYREFA---FSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLN 199

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
              + G       + Q+M    I P     ++++   CK  K+ EA   ++ M  +GV P
Sbjct: 200 NLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEP 259

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           + +TY+++I  +    D+  A  +L  M    +     TY +LI G C    +  A+ +L
Sbjct: 260 NIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVL 319

Query: 542 VSLQEHN-ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
             +QE   +   + AY  +I  +C  G +  A+    +M+  G +      T  F C  L
Sbjct: 320 RGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLK------TNLFICNSL 373

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            NG+    EI E       +G        +   M+   L PD +  N
Sbjct: 374 INGYCKRGEIHEA------EG--------VITRMVDWNLKPDSYSYN 406


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 154/494 (31%), Positives = 258/494 (52%), Gaps = 20/494 (4%)

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +  +  +  M   G+ P+  T +IL   F L+  +   + V+ K++  G  P I+T+T L
Sbjct: 108 DAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTL 167

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G C+ G   + L+L + M+++G + +V  Y+ +++ +CK G    A GL+ +M  VG 
Sbjct: 168 INGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGC 227

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           +PD+VTYS LI  LCK   V++A+ +++ M +K ISP   ++ +++ GLC      EA  
Sbjct: 228 QPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASA 287

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             + +   N + D+V ++++ID + K GN+ EA  + + + E  + P+++T+NSL++G+ 
Sbjct: 288 MLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYS 347

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
              +V +AR+L D +   G +P   +Y+  +N YC    I     L  EM  + + P  V
Sbjct: 348 LQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTV 407

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           +YT +I   C+  KL+EA +L +DM+  G  PD  TY+ ++  FCK   L KAF+L   M
Sbjct: 408 SYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAM 467

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               L+P    Y ILID +C +G+L +A  L   L  H +      YTTII   C EG +
Sbjct: 468 QGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLL 527

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
            +A+  F +M E                    +G PP++    V++  F Q  D     +
Sbjct: 528 DEALEAFRKMEE--------------------DGCPPNEFSYNVIIRGFLQHKDESRAVQ 567

Query: 630 LAAVMIKSGLLPDK 643
           L   M   G + D+
Sbjct: 568 LIGEMRDKGFVADE 581



 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 250/472 (52%), Gaps = 5/472 (1%)

Query: 69  VIDGLCQQSRLQDAILFLQ---ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           ++  + +  +  DA++ L    E AG    P+  +LN +++ +C +   ++   +   ++
Sbjct: 96  LLSAIVRMRQYYDAVISLSKQMELAG--LSPNTCTLNILINCFCLMQHVDLGFSVLAKVI 153

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K GL P   ++  LI+GLC AG   +ALE  +DM   G +PD  TY+ +  G   + + +
Sbjct: 154 KLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETA 213

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  +I+K+   G  PD+VTY+ LI   C+   V E L +   M ++G    V++Y+ L+
Sbjct: 214 AAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLI 273

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +C   R  EA  +L EM ++ + PD+VT+S+LI   CK+  V +A  +   M    + 
Sbjct: 274 QGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVE 333

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN   + +++ G   +  + EAR  FD +I   C  DV  Y+I+I+GY  +  I EA QL
Sbjct: 334 PNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQL 393

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           + ++I + ++P+ V++ +LI+ FC+ GK+ +AR L   +  +G  P   TY+  +  +C+
Sbjct: 394 FNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCK 453

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +G + +   L + M+   + P  V YT++I  +CK   L  A +L  +++V G+ PD   
Sbjct: 454 QGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQI 513

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           Y TII   CK   L +A +   +M      P   +YN++I G   + D   A
Sbjct: 514 YTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRA 565



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 145/483 (30%), Positives = 247/483 (51%), Gaps = 6/483 (1%)

Query: 8   RTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYN---LRHTDIMWD-LYDDIKVSETPRN 62
           R    +DAV  ++K  EL  L  +  T N L+     ++H D+ +  L   IK+   P  
Sbjct: 102 RMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQP-T 160

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T + +I+GLC+      A+    +   +   P V +   I++  CK+G    A GL  
Sbjct: 161 IITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIK 220

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + G  PD  +Y+ LI  LC    + EAL+  + M   G+ P  ++Y+ L +G    S
Sbjct: 221 KMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFS 280

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A  ++ ++      PDIVT+++LI  +C+ GNV E   + + M   G + NVI Y+
Sbjct: 281 RWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYN 340

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+        + EA  L   M   G KPD+ +YSILI G C   ++ +A QL+NEM  +
Sbjct: 341 SLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQ 400

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            ++PN+ ++  ++   C+   + EAR  F  +  +  + D+  Y+++++G+ K G +G+A
Sbjct: 401 GLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKA 460

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +L+R +    + P++V +  LI   CK+G +  AR+L   + +HGL+P    YTT +N 
Sbjct: 461 FRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIING 520

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+EG +   L   ++ME     P   +Y V+I+G  +      AVQL+ +M   G   D
Sbjct: 521 LCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580

Query: 483 QIT 485
           + T
Sbjct: 581 EGT 583


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 164/577 (28%), Positives = 282/577 (48%), Gaps = 33/577 (5%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PSV++ NA++           A+  F  ML  G+ P+ ++YNILI  LC  G  +EAL  
Sbjct: 114 PSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             DM   G  P+ +TY+ L   F    ++ GA +++  +L  G  P++VT+  ++ G C+
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G +E+  K+ + M+ +G   + ++Y+ L+   CK+G   EAL +  EM   G+ PD+VT
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ LI  +CK   +  A+ L  +M  + +  N     A++ G C+K  + +A +    + 
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR 352

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                  VV YN +I+GY  +G + EA +L  ++  K + P +VT++++I  +CKN    
Sbjct: 353 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 412

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L   +   G+ P A+TY++ +   CEE  +     L + M    + P   TYT +I
Sbjct: 413 SAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 472

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G CK+  ++ A+ L + M   GV PD +TY+ +I    K     +A QLL +++     
Sbjct: 473 DGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPI 532

Query: 516 PTSATYN---------------ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           P +  Y+                L+ G C+ G +  AD +  S+ + N +L    Y+ +I
Sbjct: 533 PANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLI 592

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP--------------- 605
             HC  G+V KA++F  QM+++GF  +    T S    +  NG                 
Sbjct: 593 HGHCRAGNVMKALSFHKQMLQRGFAPN-STSTISLIRGLFENGMVVEADQVIQQLLNCCS 651

Query: 606 -PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
             D E  + ++      G++ +V ++   M K GLLP
Sbjct: 652 LADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 172/599 (28%), Positives = 292/599 (48%), Gaps = 61/599 (10%)

Query: 30  SIQTYNSLLYNLRHTDIM--WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           S+  YN++L  L    +      +D +       NVYT +I+I  LC +   ++A+  L+
Sbjct: 115 SVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILR 174

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           +  G   GP+VV+ N +++ + + G  + A+ L  +ML  GL P+  ++N +++G+C AG
Sbjct: 175 DMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAG 234

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            ME+A +  ++M R G+ PD ++Y+ L  G+        A  V  ++  KG  PD+VT+T
Sbjct: 235 KMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFT 294

Query: 208 VLICGYCQIGNV-----------EEGLKLREVMLS--------QGF-------------- 234
            LI   C+ GN+           E GL++ EV  +        +GF              
Sbjct: 295 SLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQC 354

Query: 235 --KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
             K +V+ Y+ L++  C  GR+DEA  LL+EMEA GLKPD+VTYS +I   CK    H A
Sbjct: 355 RIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSA 414

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            +L  +M  K + P++  + +++  LCE++ +++A + F ++I      D   Y  +IDG
Sbjct: 415 FELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 474

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE-- 410
           + K GN+  A+ L+ ++++  + P +VT++ LI G  K+ +  +A++LL   KL+  E  
Sbjct: 475 HCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL--FKLYHEEPI 532

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+   Y   M+  C +  ++ +LALL                   KG C +  + EA ++
Sbjct: 533 PANTKYDALMHC-CRKAELKSVLALL-------------------KGFCMKGLMNEADKV 572

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
            + M       D   Y+ +I   C+  ++ KA     QM      P S +   LI GL  
Sbjct: 573 YQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFE 632

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
           NG +  AD ++  L          A   +I  +  EG+V   +     M + G   S R
Sbjct: 633 NGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPSPR 691



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 229/488 (46%), Gaps = 47/488 (9%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
           L   + R G V  A  ++  M +  LK ++ T+NS+                        
Sbjct: 191 LVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSM------------------------ 226

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
                   ++G+C+  +++DA     E   +   P  VS N ++  YCK G +  A  +F
Sbjct: 227 --------VNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVF 278

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+ PD  ++  LIH +C AG++E A+     M   G++ + +T++ L  GF   
Sbjct: 279 AEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKK 338

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A   ++ +      P +V Y  LI GYC +G ++E  +L   M ++G K +V+ Y
Sbjct: 339 GFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTY 398

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S ++S+ CK+     A  L  +M   G+ PD +TYS LIR LC++ ++  A  L+  M  
Sbjct: 399 STIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIK 458

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             + P+ F + +++ G C++  +  A    D ++ +  + DVV Y+++I+G  K     E
Sbjct: 459 LGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAME 518

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIY---------------GFCKNGKVADARRLLDTIKL 406
           A QL  +L  +   P+   +++L++               GFC  G + +A ++  ++  
Sbjct: 519 AQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLD 578

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
                    Y+  ++ +C  GN+ + L+  ++M  +   P   +   +I+GL +   + E
Sbjct: 579 RNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVE 638

Query: 467 AVQLLEDM 474
           A Q+++ +
Sbjct: 639 ADQVIQQL 646



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 188/390 (48%), Gaps = 16/390 (4%)

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  P ++ Y+ ++  L     +  A + ++ M S  ++PN + +  ++  LC +    EA
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                 +  + C  +VV YN ++  + + G +  A +L   +++  + P++VTFNS++ G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK GK+ DAR++ D +   GL P  V+Y T +  YC+ G     L++  EM  K I P 
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            VT+T +I  +CK   L+ AV L+  M   G+  +++T+  +I  FCK   L  A   + 
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M    ++P+   YN LI+G C+ G +  A  LL  ++   +    V Y+TII A+C   
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICE 612
           D H A     QM+EKG       Y+                  F  M+  G  PD+    
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            ++    + G++     L   M+K+G+LPD
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPD 499



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 192/425 (45%), Gaps = 53/425 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMW--DLYDDIKVSETPRN 62
           Y + G  H+A+ V A+M +  +   + T+ SL++ + +  ++ W   L   ++      N
Sbjct: 265 YCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMN 324

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +IDG C++  L DA+L ++        PSVV  NA+++ YC +G  + A+ L  
Sbjct: 325 EVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLH 384

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   GL PD  +Y+ +I   C       A E    M   GV PDAITYS L +      
Sbjct: 385 EMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEK 444

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++S A  + + ++  G  PD  TYT LI G+C+ GNVE  L L + M+  G   +V+ YS
Sbjct: 445 RLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYS 504

Query: 243 VLLSSMCKSGRIDEALGLLY------------------------EMEAV----------G 268
           VL++ + KS R  EA  LL+                        E+++V          G
Sbjct: 505 VLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKG 564

Query: 269 L----------------KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           L                  D   YS+LI G C+   V KA+  + +M  +  +PNS +  
Sbjct: 565 LMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTI 624

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           +++ GL E  M+ EA      L+    + D      +ID  +  GN+   + +   + + 
Sbjct: 625 SLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKD 684

Query: 373 RISPS 377
            + PS
Sbjct: 685 GLLPS 689


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 151/534 (28%), Positives = 282/534 (52%), Gaps = 7/534 (1%)

Query: 7   SRTGM----VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSET 59
           SR G+    + DAV +  +M +     SI  ++ LL     +   D++  L + ++    
Sbjct: 53  SRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI 112

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N YT SI+I+  C++S+L  A+  L +     + P++V+L+++++ YC       A  
Sbjct: 113 PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA 172

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M   G  P+  ++N LIHGL +     EA+   + M   G +PD +TY ++  G  
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
                  A+ ++ K+     +P ++ Y  +I G C+  ++++ L L + M ++G + NV+
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            YS L+S +C  GR  +A  LL +M    + PD+ T+S LI    K+ K+ +A +LY+EM
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             + I P+   + +++ G C  + + EA+  F+ ++  +C  DVV YN +I G+ K   +
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            E ++++R++ ++ +  + VT+N LI G  + G    A+ +   +   G+ P+ +TY T 
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C+ G +++ + + + ++   + PT  TY ++I+G+CK  K+++   L  ++ + GV
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
            PD + YNT+I  FC+     +A  L  +M      P S  YN LI     +GD
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 272/520 (52%), Gaps = 1/520 (0%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           Y   +  +GL  + +L DA+    E       PS++  + ++S   K+   +V   L   
Sbjct: 48  YREKLSRNGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQ 106

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G+  + ++Y+ILI+  C    +  AL     M + G EP+ +T S L  G+    +
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           IS A  ++ ++ + G  P+ VT+  LI G        E + L + M+++G + +++ Y V
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +++ +CK G  D A  LL +ME   L+P ++ Y+ +I GLCK   +  A+ L+ EM +K 
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I PN   + +++  LC     ++A      +I      DV  ++ +ID +VK G + EA 
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +LY +++++ I PSIVT++SLI GFC + ++ +A+++ + +      P  VTY T +  +
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+   ++  + + +EM  + +    VTY ++I+GL +      A ++ ++M   GV P+ 
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TYNT++   CK   L KA  +   +    +EPT  TYNI+I+G+C  G +++   L  +
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L    +    VAY T+I   C +G   +A   F +M E G
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 256/541 (47%), Gaps = 15/541 (2%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  M+K    P    ++ L+  +      +  +     M   G+  +  TYSIL  
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F   SQ+  A  V+ K++  G +P+IVT + L+ GYC    + E + L + M   G++ 
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N + ++ L+  +    +  EA+ L+  M A G +PDLVTY +++ GLCK+     A  L 
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           N+M   ++ P    +  I+ GLC+ + + +A   F  +       +VV Y+ +I      
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   +A +L   +IE++I+P + TF++LI  F K GK+ +A +L D +    ++PS VTY
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           ++ +N +C    +     + + M +K   P  VTY  +IKG CK  +++E +++  +M  
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+  + +TYN +I+   +  D   A ++  +M    + P   TYN L+DGLC NG L+ 
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--S 594
           A  +   LQ   +  T   Y  +I+  C  G V      FC +  KG +  +  Y    S
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544

Query: 595 FFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            FC              M  +G  P+      ++ A  + GD  +  EL   M   G   
Sbjct: 545 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAG 604

Query: 642 D 642
           D
Sbjct: 605 D 605



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 242/483 (50%), Gaps = 3/483 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           + R   +  A+ V+ KM +L  + +I T +SLL    H+  + +   L D + V+    N
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +I GL   ++  +A+  +     K   P +V+   +++  CK G  ++A  L  
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M +  L P    YN +I GLC    M++AL    +M   G+ P+ +TYS L        
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           + S A +++  ++ +  +PD+ T++ LI  + + G + E  KL + M+ +    +++ YS
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++  C   R+DEA  +   M +    PD+VTY+ LI+G CK  +V + ++++ EM  +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +  N+  +  ++ GL +      A+  F  ++      +++ YN ++DG  K G + +A
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + ++  L   ++ P+I T+N +I G CK GKV D   L   + L G++P  V Y T ++ 
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +C +G+ +   AL +EM+     P    Y  +I+   +    + + +L+++M   G   D
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605

Query: 483 QIT 485
             T
Sbjct: 606 AST 608



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 211/436 (48%), Gaps = 16/436 (3%)

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           E++ S+ F  ++I +S LLS++ K  + D  + L  +M+ +G+  +  TYSILI   C++
Sbjct: 71  EMVKSRPFP-SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRR 129

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            ++  A+ +  +M      PN     ++L G C  + I+EA    D + ++    + V +
Sbjct: 130 SQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF 189

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N +I G        EA+ L  +++ K   P +VT+  ++ G CK G    A  LL+ ++ 
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 249

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
             LEP  + Y T ++  C+  ++   L L +EMETK I P  VTY+ +I  LC   +  +
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A +LL DM    + PD  T++ +I +F K   L +A +L ++M   +++P+  TY+ LI+
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG--- 583
           G C++  L  A  +   +   +     V Y T+IK  C    V + M  F +M ++G   
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429

Query: 584 ------------FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
                       F+    D  +  F  M+S+G PP+      +L    + G L     + 
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489

Query: 632 AVMIKSGLLPDKFLIN 647
             + +S + P  +  N
Sbjct: 490 EYLQRSKMEPTIYTYN 505



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 136/298 (45%), Gaps = 15/298 (5%)

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + +AV L+ ++++ R  PSI+ F+ L+    K  K      L + ++  G+  +  TY+ 
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +N +C    +   LA+L +M      P  VT + ++ G C   ++ EAV L++ M+V G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
             P+ +T+NT+I          +A  L+++M     +P   TY ++++GLC  GD   A 
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            LL  +++  +    + Y TII   C    +  A+  F +M  KG   ++  Y+    C+
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 599 ---------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                          M+     PD      ++ AF + G L    +L   M+K  + P
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 30  SIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           +I TYN+LL  L     +     +++ ++ S+    +YT +I+I+G+C+  +++D     
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
              + K   P VV+ N ++S +C+ G  E A  LF  M + G  P++  YN LI      
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           G  E + E   +M   G   DA T  ++    H
Sbjct: 585 GDREASAELIKEMRSCGFAGDASTIGLVTNMLH 617


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 159/549 (28%), Positives = 282/549 (51%), Gaps = 10/549 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVS 57
           +L +VYS+  MV   + V  KM +  L   ++  N +L  LR  D+M    ++Y  +   
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
                + T + ++D  C+  ++Q  +  L E   +   P+ V+ N +++   K G  E A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           KGL   MLK GL   A++YN LI+G    G + EAL    +M   G  P   TY+    G
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
              L ++S A + +  +L     PD+V+Y  LI GYC++GN+ +   L + + S      
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           ++ Y+ LL  +C+ G ++ A  L  EM   G+ PD+VTY+IL+ G CK   +  A + ++
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  + +  +S+A+   ++G  +    + A    + ++      D+++YN+++DG  KLG
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N+ EA +L ++++   + P  VT+ S+I+   +NG++   R +   +   GL PS VTYT
Sbjct: 529 NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYT 588

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++ +  +G ++R      EM+ K I P  +TY  +I GLCK  ++ +A     +M   
Sbjct: 589 VLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEK 648

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ P++ +Y  +I   C   + ++A  L  QM    ++P S T++ L+  L         
Sbjct: 649 GIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL-------GK 701

Query: 538 DCLLVSLQE 546
           DC L ++++
Sbjct: 702 DCKLQAVRQ 710



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 163/553 (29%), Positives = 262/553 (47%), Gaps = 15/553 (2%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           SV  L+ ++  Y K    E    +F  M+K  L PD  + N ++  L     M +A+E  
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
             MG  G++P  +TY+ L   +    ++     ++ ++  +G  P+ VTY VLI G  + 
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G  E+   L   ML  G K++   Y+ L+      G + EAL L  EM   G  P + TY
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +  I GLCK  ++  A+Q  ++M +  + P+  ++  ++ G C    + +A + FD L  
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                 +V YN ++DG  + G +  A QL  ++I + I+P IVT+  L+ G CK G ++ 
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A+   D +   GLE  +  Y T +    + G+  R  +L +EM  K   P  + Y VV+ 
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 522

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLCK   L+EA +LL+ M   GV PD +TY +II +  +   LRK  ++  +M    L P
Sbjct: 523 GLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTP 582

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           +  TY +LI G    G L+ A      +QE  I    + Y ++I   C    + +A  FF
Sbjct: 583 SVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF 642

Query: 577 CQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQG 621
            +MVEKG   +   YT                S +  ML  G  PD      +L    + 
Sbjct: 643 AEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702

Query: 622 GDLGSVFELAAVM 634
             L +V +L +++
Sbjct: 703 CKLQAVRQLESLL 715



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 221/487 (45%), Gaps = 50/487 (10%)

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +LI  Y +   VE+ L + + M+      +V   + +L  +     + +A+ +   M   
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G+KP +VTY+ L+   CK  KV + + L +EM  +  +PN   +  ++ GL +K    +A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           +     ++ +        YN +I GY   G + EA+ L  +++ K  SP++ T+NS IYG
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G+++DA + L  +  + L P  V+Y T +  YC  GN+ +   L  E+ +  + PT
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC------------- 494
            VTY  ++ GLC+Q +L+ A QL  +M   G+ PD +TY  ++   C             
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468

Query: 495 ----------------------KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
                                 K  D  +AF L  +M      P    YN+++DGLC  G
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +L+ A  LL  +    +    V YT+II AH   G + K    F +M+ KG   S+  YT
Sbjct: 529 NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYT 588

Query: 593 -------------KSF--FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
                        ++F  F  M   G  P+      ++    +   +   +   A M++ 
Sbjct: 589 VLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEK 648

Query: 638 GLLPDKF 644
           G+ P+K+
Sbjct: 649 GIFPNKY 655


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 164/562 (29%), Positives = 289/562 (51%), Gaps = 8/562 (1%)

Query: 28  KVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAIL 84
           K  + +YN LL  L    H      +Y D+  S    N+ T  I+I G C+  +   A+ 
Sbjct: 24  KHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALE 83

Query: 85  FLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
           FL+        P V   N ++    K G  + A  LF  M    + P+  +YN +I GLC
Sbjct: 84  FLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLC 143

Query: 145 IAGSMEEALEFTNDMGRHGVE--PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
            +G++E+A E   +M R G +  PD +TY+ L   F+  S+I  A    +K+   G +PD
Sbjct: 144 KSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPD 203

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           ++T  +L+ G C+ G+VEE L++ + M   G   +VI Y+ ++ ++C +G++ EA  +L 
Sbjct: 204 VLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILK 263

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
            M      PDLVT++ L+ G CK   + +A+++  EMC + I P+   +  ++ GLC   
Sbjct: 264 TMSC---SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVG 320

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            +  A    + ++    I DV+ Y  ++DG  K G I EA +L +++  +     +V ++
Sbjct: 321 QVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYS 380

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           SL+ G+C+ G V  AR +L  +    + P   TY   +    ++G+I + ++L+ ++  +
Sbjct: 381 SLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVAR 440

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
              P  VTY  +I GLCK  +++EA  L ++M   G  P+ +T  +++   C+   +  A
Sbjct: 441 GYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDA 500

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
           + L+ +M      P    Y  LIDGLC +  + +A  +L +++   ++L   AY  +I +
Sbjct: 501 WSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVS 560

Query: 563 HCAEGDVHKAMTFFCQMVEKGF 584
               G V +AM  + +MV +GF
Sbjct: 561 MSHGGRVAEAMAMYDEMVARGF 582



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 271/549 (49%), Gaps = 25/549 (4%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P++V+   ++   CK G A  A      + ++ + PD + +N+LIHGL   G+ ++A++ 
Sbjct: 60  PNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKL 119

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG--SDPDIVTYTVLICGY 213
             +M    V+P+ +TY+ +  G      +  A +++++++ KG  S PDIVTY  LI  +
Sbjct: 120 FENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAF 179

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
            +   + E    RE M + G   +V+  ++L+S +CK G ++EAL +L  M+  G  PD+
Sbjct: 180 YRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDV 239

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           +TY+ +I  LC   KV +A ++   M     SP+      +L G C+  M+  A    + 
Sbjct: 240 ITYNSIIHALCVAGKVVEAAEILKTMSC---SPDLVTFNTLLDGFCKAGMLPRALEVLEE 296

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +   N + DV+ Y I+++G  ++G +  A  L  +++ +   P ++ + SL+ G CK+G+
Sbjct: 297 MCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGE 356

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + +A +L+  + + G     V Y++ ++ YC  GN+ +   +L EM +  + P   TY +
Sbjct: 357 IEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNI 416

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           V+ GL K   + +AV L+ D+   G  PD +TYNT+I   CK   +R+A  L ++M    
Sbjct: 417 VLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRG 476

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
             P   T   ++ GLC  G + +A  L+V +     +   V YT++I   C    +  A 
Sbjct: 477 CFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDAC 536

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
                M  +G  +    Y K                    ++++   GG +     +   
Sbjct: 537 MVLDAMRGQGVALDDFAYRK--------------------LIVSMSHGGRVAEAMAMYDE 576

Query: 634 MIKSGLLPD 642
           M+  G LPD
Sbjct: 577 MVARGFLPD 585



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 258/522 (49%), Gaps = 8/522 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G    A+  +  + E  +   +  +N L++ L    + D    L+++++ S     + 
Sbjct: 74  KAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIV 133

Query: 65  TNSIVIDGLCQQSRLQDAILFLQE--TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           T + VI GLC+   L+ A   L+E    G +  P +V+ N +++ + +      A     
Sbjct: 134 TYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFRE 193

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G++PD  + NIL+ G+C  G +EEALE  + M   G  PD ITY+ +     +  
Sbjct: 194 KMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAG 253

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A ++++ +      PD+VT+  L+ G+C+ G +   L++ E M  +    +VI Y+
Sbjct: 254 KVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 310

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L++ +C+ G++  A  LL E+   G  PD++ Y+ L+ GLCK  ++ +A +L  EM  +
Sbjct: 311 ILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVR 370

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
                   + +++ G C    + +AR     ++  N +  +  YNI++ G +K G+I +A
Sbjct: 371 GCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKA 430

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           V L   L+ +   P +VT+N+LI G CK  +V +A  L D +   G  P+ VT  + +  
Sbjct: 431 VSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFG 490

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C  G +    +L+ EM  K   P  V YT +I GLCK  ++ +A  +L+ M   GV  D
Sbjct: 491 LCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALD 550

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
              Y  +I S      + +A  + ++M      P  +T   L
Sbjct: 551 DFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 232/458 (50%), Gaps = 5/458 (1%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G   D  SYN L+  L  +G      +   D+   G  P+ +T+ IL +G     Q   A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            + ++ L      PD+  + VLI G  + GN ++ +KL E M S   K  ++ Y+ ++S 
Sbjct: 82  LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141

Query: 248 MCKSGRIDEALGLLYEMEAVGLK--PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           +CKSG +++A  LL EM   G K  PD+VTY+ LI    +  ++ +A     +M +  I+
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+      ++ G+C+   + EA    D + ++  + DV+ YN +I      G + EA ++
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI 261

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
            + +     SP +VTFN+L+ GFCK G +  A  +L+ +    + P  +TYT  +N  C 
Sbjct: 262 LKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 318

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G +Q    LL+E+  +   P  + YT ++ GLCK  +++EA +L+++M V G     + 
Sbjct: 319 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVM 378

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           Y++++  +C+  ++ KA ++L +M   N+ P   TYNI++ GL  +G +  A  L+  L 
Sbjct: 379 YSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV 438

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
                   V Y T+I   C    V +A     +M  +G
Sbjct: 439 ARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRG 476



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 177/363 (48%), Gaps = 40/363 (11%)

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
            G+K +V +Y+ LL  + KSG       +  ++   G  P+LVT+ ILIRG CK  +  +
Sbjct: 21  DGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMR 80

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A++    +    ++P                                   DV ++N++I 
Sbjct: 81  ALEFLRALDEFSVAP-----------------------------------DVYIFNVLIH 105

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE- 410
           G  K GN  +AV+L+  +   R+ P IVT+N++I G CK+G +  AR LL+ +   G + 
Sbjct: 106 GLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKS 165

Query: 411 -PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P  VTY T +NA+     I+   A  ++M+   I P  +T  +++ G+CK   ++EA++
Sbjct: 166 APDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALE 225

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +L+ M + G  PD ITYN+II + C    + +A ++L  M   +  P   T+N L+DG C
Sbjct: 226 ILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFC 282

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             G L  A  +L  +   NI    + YT ++   C  G V  A     ++V +G+   + 
Sbjct: 283 KAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 342

Query: 590 DYT 592
            YT
Sbjct: 343 AYT 345



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 3/207 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRN 62
           Y R G VH A  ++A+M  +++   + TYN +L  L     +     L  D+       +
Sbjct: 386 YCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPD 445

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +IDGLC+ +R+++A     E A +   P+ V+L +++   C++G  + A  L  
Sbjct: 446 VVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVV 505

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M +    P+   Y  LI GLC +  M++A    + M   GV  D   Y  L        
Sbjct: 506 EMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGG 565

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +++ A  +  +++ +G  PD  T   L
Sbjct: 566 RVAEAMAMYDEMVARGFLPDGSTSKTL 592


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 170/574 (29%), Positives = 280/574 (48%), Gaps = 21/574 (3%)

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
           + K+   SV+  + ++  +      E A  +F    K GL     S N L+  L  A   
Sbjct: 171 SPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRR 230

Query: 150 EEALEFTNDMGRHGVEPDAITYSIL----AKGFHLLSQISG--AWKVIQKLLIKGSDPDI 203
           E       +M   G  P+  TY+I+     KG    + I    A ++++++   G  P +
Sbjct: 231 EFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTV 290

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           VTY+  I G C++G VE  L     ++S    +NV  Y+ ++  +CK G +DEAL +L E
Sbjct: 291 VTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEE 350

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M++ G+ PD+ TYSILI G CKQ  V K + L  EM    + P+  ++ ++  GLC+K +
Sbjct: 351 MKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRL 410

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
              +   F  L  +    D   Y+I+I G+   G++  A +L  +++   ++P    F S
Sbjct: 411 SDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFES 470

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L++GFCK G   +A    + +   G+ PS  T    ++A+C EG ++  L L+ EM+T+ 
Sbjct: 471 LVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQG 530

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           I P   TY  VI  LCK+ K + A++L   M    V P  + Y+T+I  F K  + +KA 
Sbjct: 531 IFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKAL 590

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L  +M    + P    Y ILI+ LC    +  A  L   + E+ ++  K++YT++I   
Sbjct: 591 MLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGF 650

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQ 608
           C  GD+ KA   F +M+++G   ++  YT     +C              M   G  PD 
Sbjct: 651 CRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDV 710

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
               V++ A  + G+L    E+   M ++G+LPD
Sbjct: 711 VTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPD 744



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 155/568 (27%), Positives = 284/568 (50%), Gaps = 44/568 (7%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +L  V++   M+ +AV V  + K+  L++S ++ N LL  L      + +  L++++K +
Sbjct: 184 LLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKST 243

Query: 58  ETPRNVYTNSIVIDGLCQQS------RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
             P NV+T +I+++  C+ +        + A   L+E       P+VV+ +  +   C++
Sbjct: 244 GPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRV 303

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G+ E A      ++      + + YN +IHGLC  G ++EAL+   +M   G+ PD  TY
Sbjct: 304 GYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTY 363

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           SIL  GF     +     +I+++     +P +V+Y+ L  G C+    +  L +   + +
Sbjct: 364 SILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGA 423

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK------ 285
            G+K +  AYS+L+   C  G +D A  L+ EM    L PD   +  L+ G CK      
Sbjct: 424 AGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVN 483

Query: 286 -----------------------------QDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
                                        + +V +A+ L NEM ++ I PN F + A++ 
Sbjct: 484 ALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVIN 543

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
            LC++     A   F  ++  N +  VV+Y+ +IDG+ K  N  +A+ LY ++++  ++P
Sbjct: 544 RLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTP 603

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            +V +  LI   C   ++ +A  L   +  +G+ P  ++YT+ +  +C  G++++  AL 
Sbjct: 604 DMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALF 663

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
            EM  +   PT VTYT ++ G CK  ++  A  L+++M   G+TPD +TYN +I +  + 
Sbjct: 664 NEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRR 723

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            +L KA ++LN+M  + + P   TY +L
Sbjct: 724 GNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 210/468 (44%), Gaps = 21/468 (4%)

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           K +   ++ + +LI  +     +E  + +       G +L+  + + LL  + ++ R + 
Sbjct: 173 KDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREF 232

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQD------KVHKAIQLYNEMCSKRISPNSFA 310
              L  EM++ G  P++ TY+I++   CK +         +A ++  EM     SP    
Sbjct: 233 LRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVT 292

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +   + GLC    +  A  +  SLI +N + +V  YN +I G  K G + EA+++  ++ 
Sbjct: 293 YSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMK 352

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
              ISP + T++ LI+GFCK G V     L++ +K   +EPS V+Y++  +  C++    
Sbjct: 353 SCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSD 412

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             L + +++           Y+++IKG C Q  L  A +L+E+M    + PD   + +++
Sbjct: 413 ISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLV 472

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             FCK      A +  N M    + P+ AT N++ID  C  G ++ A  L+  +Q   I 
Sbjct: 473 HGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIF 532

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SF 595
                Y  +I   C E    +A+  F  M+++    S+  Y+                  
Sbjct: 533 PNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALML 592

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           +  ML  G  PD     +++        +   + L   M ++G+ PDK
Sbjct: 593 YARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDK 640



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 194/465 (41%), Gaps = 66/465 (14%)

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE---------MEAVGL 269
           V   +K    M   GF  ++ A+  +++ +  +G   E   LL +         ++A  L
Sbjct: 105 VARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFEL 164

Query: 270 KP-----------DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            P            ++ + +LI+       +  A+ ++ +     +  ++ +   +L  L
Sbjct: 165 FPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCL 224

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
            E       R  F+ +  +    +V  Y IM++ Y K GN GEA    RQ  E       
Sbjct: 225 AEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCK-GNFGEADIDTRQATE------- 276

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
                                +L+ ++ +G  P+ VTY+T++   C  G ++  L  ++ 
Sbjct: 277 ---------------------ILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRS 315

Query: 439 METKAIGPTHV-TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           +   A G  +V  Y  +I GLCK+ +L EA+++LE+M   G++PD  TY+ +I  FCK  
Sbjct: 316 L-ISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQG 374

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
           D+ K   L+ +M   N+EP+  +Y+ L  GLC       +  +   L        + AY+
Sbjct: 375 DVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYS 434

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTK--------SFFCMMLSN 602
            +IK  C +GD+  A     +MV          FE  +  + K         FF MML  
Sbjct: 435 ILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEG 494

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           G  P    C V++ A  + G +     L   M   G+ P+ F  N
Sbjct: 495 GILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYN 539



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 80/381 (20%), Positives = 130/381 (34%), Gaps = 118/381 (30%)

Query: 374 ISPSIV-TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
           +SP +V  F SL      N +VA   +   T+K +G   S   + T +N     G    +
Sbjct: 90  LSPVVVKVFKSL------NWEVARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEV 143

Query: 433 LALLQEM--------------------ETKAIGPTHVTYTVVIKGLCKQWKLQEAV---- 468
            ALL+++                      K    + + + ++IK       L+ AV    
Sbjct: 144 YALLRDIVCYYNKVNLDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFL 203

Query: 469 -------------------------------QLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
                                           L E+M   G  P+  TY  ++  +CK  
Sbjct: 204 QAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGN 263

Query: 498 ------DLRKAFQLLNQMWLHNLEPTSAT------------------------------- 520
                 D R+A ++L +M  +   PT  T                               
Sbjct: 264 FGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLV 323

Query: 521 ----YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
               YN +I GLC  G+L  A  +L  ++   IS     Y+ +I   C +GDV K +   
Sbjct: 324 NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLI 383

Query: 577 CQMVEKGFEISIRDYTKSF---------------FCMMLSNGFPPDQEICEVMLIAFHQG 621
            +M     E S+  Y+  F               F  + + G+  DQ    +++  F   
Sbjct: 384 EEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQ 443

Query: 622 GDLGSVFELAAVMIKSGLLPD 642
           GDL S  +L   M+++ L PD
Sbjct: 444 GDLDSAHKLMEEMVRNNLAPD 464


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 168/598 (28%), Positives = 290/598 (48%), Gaps = 22/598 (3%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E P +VY  + +I  LC++ R  DA   L+   G      V + N +++ YC+ G  + A
Sbjct: 72  EAP-DVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   M    + PDA++Y  LI  LC  G + +AL   +DM R G +P+ +TY++L + 
Sbjct: 131 RRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
               S    A  V+ ++  KG  P+IVTY V+I G C+ G V++  +L   + S GF+ +
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            ++Y+ LL  +C S R D+   L  EM      P+ VT+ +LIR  C+   V +AIQ+  
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M     + N+     ++  +C++  + +A    + +    C  D + Y  ++ G  +  
Sbjct: 308 QMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE 367

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
              +A +L  +++     P+ VTFN+ I   C+ G +  A  L++ +  HG     VTY 
Sbjct: 368 RWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYN 427

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N +C +G+I   L L + M  K   P  +TYT ++ GLC   +L  A +L+ +M   
Sbjct: 428 ALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRG 484

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
              P+ +T+N ++  FC+   L +A +L+ QM  H   P   TYN L+DG+  +   ++A
Sbjct: 485 DCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDA 544

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---- 593
             LL  L    +S   + +++II     E  + +A+  F  + + G       Y K    
Sbjct: 545 LELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLG 604

Query: 594 -----------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                       FF  M+SNG  P++    +++      G L    +L +V+   G+L
Sbjct: 605 LCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVL 662



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 158/572 (27%), Positives = 282/572 (49%), Gaps = 38/572 (6%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           R G   DA  V+   +     V +  YN+L+       H D    L   + V+    + Y
Sbjct: 88  RRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVAP---DAY 144

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I  LC + R+ DA+  L +   +   P+VV+   ++   C+    E A  +   M
Sbjct: 145 TYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEM 204

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G  P+  +YN++I+G+C  G +++A E  N +  +G +PD ++Y+ L KG     + 
Sbjct: 205 RAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRW 264

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
               ++  +++ K   P+ VT+ +LI  +C+ G VE  +++ E M   G   N    +++
Sbjct: 265 DDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIV 324

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++S+CK GR+D+A  LL +M + G  PD ++Y+ +++GLC+ ++   A +L NEM     
Sbjct: 325 INSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNC 384

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN       +  LC+K +I +A M  + +    C   VV YN +++G+   G+I  A++
Sbjct: 385 PPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALE 444

Query: 365 LYR--------------------------------QLIEKRISPSIVTFNSLIYGFCKNG 392
           L+R                                +++     P++VTFN L+  FC+ G
Sbjct: 445 LFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKG 504

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
            + +A  L++ +  HG  P+ +TY T ++   ++ + +  L LL  + +K + P  +T++
Sbjct: 505 FLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFS 564

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I  L K+ +++EAVQL   +  IG+ P  + YN I+   CK  ++  A      M  +
Sbjct: 565 SIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSN 624

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
              P  +TY ILI+GL   G LK A  LL  L
Sbjct: 625 GCMPNESTYIILIEGLAHEGLLKEAQDLLSVL 656



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 222/456 (48%), Gaps = 6/456 (1%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  PD +    LI  LC  G   +A          G   D   Y+ L  G+     +  A
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++I  + +    PD  TYT LI   C  G V + L L + ML +G + NV+ Y+VLL +
Sbjct: 131 RRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           MC++   ++A+ +L EM A G  P++VTY+++I G+C++ +V  A +L N + S    P+
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           + ++  +L GLC  +   +    F  ++  NC+ + V ++++I  + + G +  A+Q+  
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           Q+ E   + +    N +I   CK G+V DA +LL+ +  +G  P  ++YTT +   C   
Sbjct: 308 QMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE 367

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
                  LL EM      P  VT+   I  LC++  +++A+ L+E M   G T   +TYN
Sbjct: 368 RWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYN 427

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++  FC    +  A +L   M     +P + TY  L+ GLC    L  A  L+  +   
Sbjct: 428 ALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRG 484

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +     V +  ++   C +G + +A+    QM+E G
Sbjct: 485 DCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHG 520



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 229/481 (47%), Gaps = 6/481 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R      A+ V+ +M+      +I TYN ++  +      D   +L + +       +  
Sbjct: 190 RNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTV 249

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           + + ++ GLC   R  D      E   K   P+ V+ + ++  +C+ G  E A  +   M
Sbjct: 250 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQM 309

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            ++G   +    NI+I+ +C  G +++A +  NDMG +G  PD I+Y+ + KG     + 
Sbjct: 310 TEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERW 369

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +++ +++     P+ VT+   IC  CQ G +E+ + L E M   G  + V+ Y+ L
Sbjct: 370 DDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNAL 429

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++  C  G ID AL L   M     KP+ +TY+ L+ GLC  +++  A +L  EM     
Sbjct: 430 VNGFCVQGHIDSALELFRSMPC---KPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDC 486

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN      ++   C+K  + EA    + ++   C  +++ YN ++DG  K  +  +A++
Sbjct: 487 PPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALE 546

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L   L+ K +SP ++TF+S+I    K  ++ +A +L   ++  G+ P AV Y   +   C
Sbjct: 547 LLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLC 606

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +   I   +     M +    P   TY ++I+GL  +  L+EA  LL  +   GV    +
Sbjct: 607 KRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVLNKNL 666

Query: 485 T 485
           T
Sbjct: 667 T 667



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 193/377 (51%), Gaps = 6/377 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           ML   + R GMV  A+ V+ +M E     +    N ++ ++      D  + L +D+   
Sbjct: 288 MLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSY 347

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +  + + V+ GLC+  R  DA   L E       P+ V+ N  +   C+ G  E A
Sbjct: 348 GCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQA 407

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M ++G      +YN L++G C+ G ++ ALE    M     +P+ ITY+ L  G
Sbjct: 408 IMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTG 464

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++ GA +++ ++L     P++VT+ VL+  +CQ G +EE ++L E M+  G   N
Sbjct: 465 LCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPN 524

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +I Y+ LL  + K    ++AL LL+ + + G+ PD++T+S +I  L K+D++ +A+QL++
Sbjct: 525 LITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFH 584

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            +    + P +  +  ILLGLC++  I  A  +F  ++ + C+ +   Y I+I+G    G
Sbjct: 585 VVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEG 644

Query: 358 NIGEAVQLYRQLIEKRI 374
            + EA  L   L  + +
Sbjct: 645 LLKEAQDLLSVLCSRGV 661



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 144/302 (47%), Gaps = 25/302 (8%)

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP-SIVTFNSLIYGFCKNGKVADARRL 400
           DV L   +I    + G   +A ++ R   E   SP  +  +N+L+ G+C+ G +  ARRL
Sbjct: 75  DVYLCTKLIRNLCRRGRTSDAARVLRA-AEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 133

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           + ++ +    P A TYT  +   C+ G +   L+LL +M  +   P  VTYTV+++ +C+
Sbjct: 134 IGSMPV---APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
               ++A+ +L++M   G TP+ +TYN II   C+   +  A +LLN++  +  +P + +
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVS 250

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y  L+ GLC +    + + L   + E N    +V +  +I+  C  G V +A+    QM 
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT 310

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           E G                       +  +C +++ +  + G +   F+L   M   G  
Sbjct: 311 EHGCAT--------------------NTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCN 350

Query: 641 PD 642
           PD
Sbjct: 351 PD 352


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  271 bits (693), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 143/459 (31%), Positives = 250/459 (54%), Gaps = 4/459 (0%)

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFT--NDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           + PD ++  ILI+  C +        F+   +M + G++P+ +T+S L  G    ++I  
Sbjct: 6   IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A K+  +++  G +PD++TY+ +I G C++G+    ++L + M  +G K NV+ YS ++ 
Sbjct: 66  AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           S+CK   I EA+  L EM   G+ P++VTYS ++ G C   + ++A  L+ +M  + + P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           ++     ++ GL ++ MI EA+  F+++I      +V  YN ++DGY     + EA +L+
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             ++ K  +PS+ ++N LI G CK+G++ +A+ LL  +    L P  VTY+T M  +C++
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G  Q    LL+EM +  + P  +TY++V+ GLCKQ  L EA +LL+ M    + P+   Y
Sbjct: 306 GRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIY 365

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC-LLVSLQ 545
             +I+  C    L  A +L + +++  ++P   TY ++I GL + G L N  C L   + 
Sbjct: 366 TILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGL-LKGGLSNEACELFRDMA 424

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            H        Y  II+     GD   A     +MV +GF
Sbjct: 425 VHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGF 463



 Score =  271 bits (693), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 247/448 (55%), Gaps = 2/448 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCL--MLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           P V +L  +++ +C             L  M K GL P+  +++ L++GL     + +A+
Sbjct: 8   PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           +  ++M + G EPD ITYS +  G   +   + A ++++K+  KG  P++V Y+ +I   
Sbjct: 68  KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+   + E ++    M+++G   NV+ YS +L   C  GR +EA  L  +M    + PD 
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDT 187

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VT++IL+ GL K+  + +A  ++  M  K + PN   + A++ G C +  + EA+  F+ 
Sbjct: 188 VTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNI 247

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++   C   V  YNI+I G+ K G I EA  L  ++  K ++P  VT+++L+ GFC++G+
Sbjct: 248 MVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR 307

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
             DA++LL+ ++ +GL P  +TY+  ++  C++G++     LL+ M+   I P    YT+
Sbjct: 308 PQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTI 367

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I+G+C   KL+ A +L  +++V G+ PD +TY  +I    K     +A +L   M +H 
Sbjct: 368 LIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHG 427

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLL 541
             P S TYN++I G   NGD  NA  L+
Sbjct: 428 CLPNSCTYNVIIQGFLRNGDTSNAGRLI 455



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 227/459 (49%), Gaps = 17/459 (3%)

Query: 201 PDIVTYTVLICGYCQIGN--VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
           PD+ T T+LI  +C   +        +   M   G + N + +S LL+ +    +I +A+
Sbjct: 8   PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L  EM  +G +PD++TYS +I GLCK      AIQL  +M  K   PN   +  I+  L
Sbjct: 68  KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C+ ++ITEA  +   ++      +VV Y+ ++ G+  LG   EA  L++Q++E+ + P  
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDT 187

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VTFN L+ G  K G + +A+ + +T+   G+EP+  TY   M+ YC +  +     L   
Sbjct: 188 VTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNI 247

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M  K   P+  +Y ++IKG CK  ++ EA  LL +M    +TPD +TY+T+++ FC+   
Sbjct: 248 MVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR 307

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
            + A +LL +M  + L P   TY+I++DGLC  G L  A  LL ++QE  I      YT 
Sbjct: 308 PQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTI 367

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNG 603
           +I+  C  G +  A   F  +  KG +  +  YT                  F  M  +G
Sbjct: 368 LIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHG 427

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             P+     V++  F + GD  +   L   M+  G   D
Sbjct: 428 CLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSAD 466



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/455 (30%), Positives = 226/455 (49%), Gaps = 5/455 (1%)

Query: 4   FVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDD-IKVSET 59
           F +S     H A  V+  M +L L+ +  T+++LL  L     + D   L+D+ +K+   
Sbjct: 20  FCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYE 79

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P +V T S +I+GLC+      AI  L++   K   P+VV  + I+   CK      A  
Sbjct: 80  P-DVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAME 138

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
               M+  G+ P+  +Y+ ++HG C  G   EA      M    V PD +T++IL  G  
Sbjct: 139 FLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLS 198

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               I  A  V + ++ KG +P++ TY  L+ GYC    ++E  KL  +M+ +G   +V 
Sbjct: 199 KEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVR 258

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           +Y++L+   CKSGRIDEA GLL EM    L PD VTYS L++G C+  +   A +L  EM
Sbjct: 259 SYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEM 318

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            S  + P+   +  +L GLC++  + EA     ++  S    ++ +Y I+I G    G +
Sbjct: 319 RSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKL 378

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A +L+  L  K I P +VT+  +I G  K G   +A  L   + +HG  P++ TY   
Sbjct: 379 EAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVI 438

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
           +  +   G+      L++EM  +       T+ ++
Sbjct: 439 IQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 225/432 (52%), Gaps = 1/432 (0%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           K+   P +V T S +++GL  ++++ DA+    E     + P V++ + I++  CK+G  
Sbjct: 40  KLGLQPNHV-TFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGST 98

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
            +A  L   M + G  P+   Y+ +I  LC    + EA+EF ++M   G+ P+ +TYS +
Sbjct: 99  TMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSI 158

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             GF  L + + A  + ++++ +   PD VT+ +L+ G  + G + E   + E M+ +G 
Sbjct: 159 LHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGV 218

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           + NV  Y+ L+   C   ++DEA  L   M   G  P + +Y+ILI+G CK  ++ +A  
Sbjct: 219 EPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKG 278

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L  EM  K ++P++  +  ++ G C+     +A+   + +     + D++ Y+I++DG  
Sbjct: 279 LLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLC 338

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K G++ EA +L + + E +I P+I  +  LI G C  GK+  AR L   + + G++P  V
Sbjct: 339 KQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVV 398

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TYT  ++   + G       L ++M      P   TY V+I+G  +      A +L+E+M
Sbjct: 399 TYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEM 458

Query: 475 YVIGVTPDQITY 486
              G + D  T+
Sbjct: 459 VGRGFSADSSTF 470



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 182/384 (47%), Gaps = 22/384 (5%)

Query: 264 MEAVGLKPDLVTYSILIRGLC--KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
           M+   ++PD+ T +ILI   C    D  H A  +   M    + PN      +L GL  K
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             I +A   FD ++      DV+ Y+ +I+G  K+G+   A+QL +++ EK   P++V +
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           +++I   CK+  + +A   L  +   G+ P+ VTY++ ++ +C  G      +L ++M  
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           + + P  VT+ +++ GL K+  + EA  + E M   GV P+  TYN ++  +C    + +
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A +L N M      P+  +YNILI G C +G +  A  LL  +    ++   V Y+T++K
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMK 300

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQG 621
             C +G    A     +M         R Y           G  PD     ++L    + 
Sbjct: 301 GFCQDGRPQDAQKLLEEM---------RSY-----------GLLPDLMTYSIVLDGLCKQ 340

Query: 622 GDLGSVFELAAVMIKSGLLPDKFL 645
           G L   FEL   M +S + P+ F+
Sbjct: 341 GHLDEAFELLKAMQESKIEPNIFI 364


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 186/724 (25%), Positives = 323/724 (44%), Gaps = 87/724 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDD--------- 53
           Y  +  + DAV ++  M   +L   ++T ++LL  L   R    +W+L+D+         
Sbjct: 165 YVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPD 224

Query: 54  -----------------IKVSETPR---------NVYTNSIVIDGLCQQSRLQDAILFLQ 87
                            ++  E  R         ++ T +++I GLC+  R+ +A+   +
Sbjct: 225 PYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKR 284

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
              GK     VV+   ++  +C+L   E    L   M++ G  P   + + L+ GL   G
Sbjct: 285 SLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQG 344

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            +++A E    +GR G  P+   Y+ L         +  A  +   + +    P+ +TY+
Sbjct: 345 KIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYS 404

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +LI  +C+ G ++  +   + M+  G    V AY+ L++  CK G +  A  L  EM   
Sbjct: 405 ILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK 464

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G++P   T++ LI G CK  +V KA +LYN+M    I+PN +   A++ GLC    + EA
Sbjct: 465 GVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEA 524

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              FD L+        V YN++I+GY + G I +A +L   + +K + P   T+  LI G
Sbjct: 525 SELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISG 584

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            C  G+V+ A+  +D +    ++ + + Y+  ++ YC+EG +   L+   EM  + I   
Sbjct: 585 LCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMD 644

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            V + V+I G  KQ   +    LL+DM+  G+ PD + Y ++I ++ K    +KAF+  +
Sbjct: 645 LVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWD 704

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI------------SLTK-- 553
            M      P   TY  L++GLC  G++  A  L   +Q  N+            +LTK  
Sbjct: 705 LMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEG 764

Query: 554 --------------------VAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEI 586
                               V +  II+  C  G  H+A     +M E G       +  
Sbjct: 765 NMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYST 824

Query: 587 SIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
            I +Y +S         +  ML+ G  PD     +++      G+L   FEL   M++ G
Sbjct: 825 LIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRG 884

Query: 639 LLPD 642
           ++PD
Sbjct: 885 IIPD 888



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/586 (27%), Positives = 282/586 (48%), Gaps = 6/586 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYD-DIKVSE-- 58
           L   + R       + ++ +M EL    +    + L+  LR    + D Y+  +KV    
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360

Query: 59  -TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
             P N++  + +I+ LC+   L  A L     +     P+ ++ + ++  +C+ G  +VA
Sbjct: 361 FVP-NLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVA 419

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              F  M++ G+    ++YN LI+G C  G +  A     +M   GVEP A T++ L  G
Sbjct: 420 ISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISG 479

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +    Q+  A+K+  K++  G  P++ T+T LI G C    + E  +L + ++ +  K  
Sbjct: 480 YCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPT 539

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + Y+VL+   C+ G+ID+A  LL +M   GL PD  TY  LI GLC   +V KA    +
Sbjct: 540 EVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFID 599

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           ++  + +  N   + A+L G C++  + EA      +I      D+V + ++IDG +K  
Sbjct: 600 DLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQP 659

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           +      L + + ++ + P  V + S+I  + K G    A    D +      P+ VTYT
Sbjct: 660 DRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYT 719

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             MN  C+ G + R   L + M+   + P  +TY   +  L K+  ++EA+ L   M + 
Sbjct: 720 ALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAM-LK 778

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+  + +T+N IIR FCK     +A ++L++M  + + P   TY+ LI   C +G++  +
Sbjct: 779 GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGAS 838

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             L  ++    +    VAY  +I   C  G++ KA      M+ +G
Sbjct: 839 VKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRG 884



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 146/303 (48%), Gaps = 4/303 (1%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMWDLYDDIKVSETPRN--VYT 65
           TG V  A   I  + + ++K++   Y++LL+   +   +M  L    ++ +   N  +  
Sbjct: 588 TGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVC 647

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           ++++IDG  +Q   +     L++   +   P  V   +++  Y K G  + A   + LM+
Sbjct: 648 HAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMV 707

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
                P+  +Y  L++GLC AG M+ A      M    V P++ITY            + 
Sbjct: 708 TEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMK 767

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A   +   ++KG   + VT+ ++I G+C++G   E  K+   M   G   + + YS L+
Sbjct: 768 EAIG-LHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLI 826

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              C+SG +  ++ L   M   GL+PDLV Y++LI G C   ++ KA +L ++M  + I 
Sbjct: 827 YEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGII 886

Query: 306 PNS 308
           P++
Sbjct: 887 PDN 889


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 151/534 (28%), Positives = 282/534 (52%), Gaps = 7/534 (1%)

Query: 7    SRTGM----VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSET 59
            SR G+    + DAV +  +M +     SI  ++ LL     +   D++  L + ++    
Sbjct: 667  SRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI 726

Query: 60   PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
            P N YT SI+I+  C++S+L  A+  L +     + P++V+L+++++ YC       A  
Sbjct: 727  PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA 786

Query: 120  LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
            L   M   G  P+  ++N LIHGL +     EA+   + M   G +PD +TY ++  G  
Sbjct: 787  LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 846

Query: 180  LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
                   A+ ++ K+     +P ++ Y  +I G C+  ++++ L L + M ++G + NV+
Sbjct: 847  KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 906

Query: 240  AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
             YS L+S +C  GR  +A  LL +M    + PD+ T+S LI    K+ K+ +A +LY+EM
Sbjct: 907  TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 966

Query: 300  CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
              + I P+   + +++ G C  + + EA+  F+ ++  +C  DVV YN +I G+ K   +
Sbjct: 967  VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 1026

Query: 360  GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             E ++++R++ ++ +  + VT+N LI G  + G    A+ +   +   G+ P+ +TY T 
Sbjct: 1027 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 1086

Query: 420  MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
            ++  C+ G +++ + + + ++   + PT  TY ++I+G+CK  K+++   L  ++ + GV
Sbjct: 1087 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 1146

Query: 480  TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
             PD + YNT+I  FC+     +A  L  +M      P S  YN LI     +GD
Sbjct: 1147 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 1200



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 272/520 (52%), Gaps = 1/520 (0%)

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            Y   +  +GL  + +L DA+    E       PS++  + ++S   K+   +V   L   
Sbjct: 662  YREKLSRNGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQ 720

Query: 124  MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
            M   G+  + ++Y+ILI+  C    +  AL     M + G EP+ +T S L  G+    +
Sbjct: 721  MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 780

Query: 184  ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
            IS A  ++ ++ + G  P+ VT+  LI G        E + L + M+++G + +++ Y V
Sbjct: 781  ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 840

Query: 244  LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
            +++ +CK G  D A  LL +ME   L+P ++ Y+ +I GLCK   +  A+ L+ EM +K 
Sbjct: 841  VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 900

Query: 304  ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            I PN   + +++  LC     ++A      +I      DV  ++ +ID +VK G + EA 
Sbjct: 901  IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 960

Query: 364  QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +LY +++++ I PSIVT++SLI GFC + ++ +A+++ + +      P  VTY T +  +
Sbjct: 961  KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 1020

Query: 424  CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            C+   ++  + + +EM  + +    VTY ++I+GL +      A ++ ++M   GV P+ 
Sbjct: 1021 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 1080

Query: 484  ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            +TYNT++   CK   L KA  +   +    +EPT  TYNI+I+G+C  G +++   L  +
Sbjct: 1081 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 1140

Query: 544  LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            L    +    VAY T+I   C +G   +A   F +M E G
Sbjct: 1141 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 1180



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 173/667 (25%), Positives = 298/667 (44%), Gaps = 90/667 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + R   V DAV ++ KM E+  K  I  YN+++ +L   +  +  +D + +I+      N
Sbjct: 268 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 327

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +++GLC  SR  DA   L +   K+  P+V++ +A++  + K G    AK LF 
Sbjct: 328 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 387

Query: 123 LMLKYGLHP-----------------------------------DAFSYNILIHGLCIAG 147
            M++  + P                                   D  SYN LI+G C A 
Sbjct: 388 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 447

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            +E+ ++   +M + G+  + +TY+ L +GF     +  A +   ++   G  PDI TY 
Sbjct: 448 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 507

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +L+ G C  G +E+ L + E M  +   L+++ Y+ ++  MCK+G+++EA  L   +   
Sbjct: 508 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 567

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN--SFAHGAILL--------- 316
           GLKPD+VTY+ ++ GLC +  +H+   LY +M  + +  N  + + G I L         
Sbjct: 568 GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKML 627

Query: 317 --------------GLCEKEM---------------------------ITEARMYFDSLI 335
                         G+C+K +                           + +A   F  ++
Sbjct: 628 SCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMV 687

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            S     ++ ++ ++    K+      + L  Q+    I  +  T++ LI  FC+  ++ 
Sbjct: 688 KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 747

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  +L  +   G EP+ VT ++ +N YC    I   +AL+ +M      P  VT+  +I
Sbjct: 748 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 807

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GL    K  EA+ L++ M   G  PD +TY  ++   CK  D   AF LLN+M    LE
Sbjct: 808 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 867

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P    YN +IDGLC    + +A  L   ++   I    V Y+++I   C  G    A   
Sbjct: 868 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 927

Query: 576 FCQMVEK 582
              M+E+
Sbjct: 928 LSDMIER 934



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 256/541 (47%), Gaps = 15/541 (2%)

Query: 117  AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
            A  LF  M+K    P    ++ L+  +      +  +     M   G+  +  TYSIL  
Sbjct: 679  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 738

Query: 177  GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
             F   SQ+  A  V+ K++  G +P+IVT + L+ GYC    + E + L + M   G++ 
Sbjct: 739  CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 798

Query: 237  NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            N + ++ L+  +    +  EA+ L+  M A G +PDLVTY +++ GLCK+     A  L 
Sbjct: 799  NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 858

Query: 297  NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            N+M   ++ P    +  I+ GLC+ + + +A   F  +       +VV Y+ +I      
Sbjct: 859  NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 918

Query: 357  GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
            G   +A +L   +IE++I+P + TF++LI  F K GK+ +A +L D +    ++PS VTY
Sbjct: 919  GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 978

Query: 417  TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            ++ +N +C    +     + + M +K   P  VTY  +IKG CK  +++E +++  +M  
Sbjct: 979  SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 1038

Query: 477  IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             G+  + +TYN +I+   +  D   A ++  +M    + P   TYN L+DGLC NG L+ 
Sbjct: 1039 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 1098

Query: 537  ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--S 594
            A  +   LQ   +  T   Y  +I+  C  G V      FC +  KG +  +  Y    S
Sbjct: 1099 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 1158

Query: 595  FFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
             FC              M  +G  P+      ++ A  + GD  +  EL   M   G   
Sbjct: 1159 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAG 1218

Query: 642  D 642
            D
Sbjct: 1219 D 1219



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 220/417 (52%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +L DAI    +       PS+V  N ++S   KL   +V   L   M   G+  D +++N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           I+I+  C    +  AL     M + G EPD +T   L  GF   +++S A  ++ K++  
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  PDIV Y  +I   C+   V +     + +  +G + NV+ Y+ L++ +C S R  +A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             LL +M    + P+++TYS L+    K  KV +A +L+ EM    I P+   + +++ G
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC  + I EA   FD ++   C+ DVV YN +I+G+ K   + + ++L+R++ ++ +  +
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 467

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            VT+N+LI GF + G V  A+     +   G+ P   TY   +   C+ G +++ L + +
Sbjct: 468 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 527

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +M+ + +    VTYT VI+G+CK  K++EA  L   + + G+ PD +TY T++   C
Sbjct: 528 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 584



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 245/480 (51%), Gaps = 12/480 (2%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  M+K    P    +N L+  +      +  +     M   G+  D  T++I+   F 
Sbjct: 175 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 234

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              Q+S A  ++ K+L  G +PD VT   L+ G+C+   V + + L + M+  G+K +++
Sbjct: 235 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 294

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           AY+ ++ S+CK+ R+++A     E+E  G++P++VTY+ L+ GLC   +   A +L ++M
Sbjct: 295 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 354

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K+I+PN   + A+L    +   + EA+  F+ ++  +   D+V Y+ +I+G      I
Sbjct: 355 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 414

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA Q++  ++ K     +V++N+LI GFCK  +V D  +L   +   GL  + VTY T 
Sbjct: 415 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 474

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +  + + G++ +      +M+   I P   TY +++ GLC   +L++A+ + EDM    +
Sbjct: 475 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 534

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             D +TY T+IR  CK   + +A+ L   + L  L+P   TY  ++ GLC  G L   + 
Sbjct: 535 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 594

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHC--AEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
           L           TK+    ++K  C  ++GD+  +     +M+  G+  S+    KS  C
Sbjct: 595 L----------YTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVC 644



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 189/750 (25%), Positives = 332/750 (44%), Gaps = 107/750 (14%)

Query: 3    AFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSET 59
            AFV  + G V +A  +  +M  + +   I TY+SL+  L      D    ++D +     
Sbjct: 372  AFV--KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 429

Query: 60   PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
              +V + + +I+G C+  R++D +   +E + +    + V+ N ++  + + G  + A+ 
Sbjct: 430  LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 489

Query: 120  LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH----------------- 162
             F  M  +G+ PD ++YNIL+ GLC  G +E+AL    DM +                  
Sbjct: 490  FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 549

Query: 163  ------------------GVEPDAITYSILAKGF---HLLSQISGAW-KVIQKLLIKG-- 198
                              G++PD +TY+ +  G     LL ++   + K+ Q+ L+K   
Sbjct: 550  KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 609

Query: 199  --SDPDIVTYTVLI-----CGYC-------QIGNVEEGLKL------------REVMLSQ 232
              SD DI     LI     CGY        + G  ++ L L            RE +   
Sbjct: 610  TLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRN 669

Query: 233  GF---KLN-----------------VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            G    KL+                 +I +S LLS++ K  + D  + L  +M+ +G+  +
Sbjct: 670  GLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHN 729

Query: 273  LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
              TYSILI   C++ ++  A+ +  +M      PN     ++L G C  + I+EA    D
Sbjct: 730  HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVD 789

Query: 333  SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
             + ++    + V +N +I G        EA+ L  +++ K   P +VT+  ++ G CK G
Sbjct: 790  QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 849

Query: 393  KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
                A  LL+ ++   LEP  + Y T ++  C+  ++   L L +EMETK I P  VTY+
Sbjct: 850  DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 909

Query: 453  VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
             +I  LC   +  +A +LL DM    + PD  T++ +I +F K   L +A +L ++M   
Sbjct: 910  SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 969

Query: 513  NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            +++P+  TY+ LI+G C++  L  A  +   +   +     V Y T+IK  C    V + 
Sbjct: 970  SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 1029

Query: 573  MTFFCQMVEKG---------------FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIA 617
            M  F +M ++G               F+    D  +  F  M+S+G PP+      +L  
Sbjct: 1030 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 1089

Query: 618  FHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              + G L     +   + +S + P  +  N
Sbjct: 1090 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 1119



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 242/483 (50%), Gaps = 3/483 (0%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
            + R   +  A+ V+ KM +L  + +I T +SLL    H+  + +   L D + V+    N
Sbjct: 740  FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 799

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
              T + +I GL   ++  +A+  +     K   P +V+   +++  CK G  ++A  L  
Sbjct: 800  TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 859

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             M +  L P    YN +I GLC    M++AL    +M   G+ P+ +TYS L        
Sbjct: 860  KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 919

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            + S A +++  ++ +  +PD+ T++ LI  + + G + E  KL + M+ +    +++ YS
Sbjct: 920  RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 979

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             L++  C   R+DEA  +   M +    PD+VTY+ LI+G CK  +V + ++++ EM  +
Sbjct: 980  SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 1039

Query: 303  RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             +  N+  +  ++ GL +      A+  F  ++      +++ YN ++DG  K G + +A
Sbjct: 1040 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 1099

Query: 363  VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            + ++  L   ++ P+I T+N +I G CK GKV D   L   + L G++P  V Y T ++ 
Sbjct: 1100 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 1159

Query: 423  YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            +C +G+ +   AL +EM+     P    Y  +I+   +    + + +L+++M   G   D
Sbjct: 1160 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 1219

Query: 483  QIT 485
              T
Sbjct: 1220 AST 1222



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 229/465 (49%), Gaps = 7/465 (1%)

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           + +A++  +DM +    P  + ++ L      L +      + +K+ + G   D+ T+ +
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           +I  +C    V   L +   ML  G++ + +    L++  C+  R+ +A+ L+ +M  +G
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
            KPD+V Y+ +I  LCK  +V+ A   + E+  K I PN   + A++ GLC     ++A 
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
                +I      +V+ Y+ ++D +VK G + EA +L+ +++   I P IVT++SLI G 
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C + ++ +A ++ D +   G     V+Y T +N +C+   ++  + L +EM  + +    
Sbjct: 409 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VTY  +I+G  +   + +A +    M   G++PD  TYN ++   C   +L KA  +   
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 528

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    ++    TY  +I G+C  G ++ A  L  SL    +    V YTT++   C +G 
Sbjct: 529 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 588

Query: 569 VHKAMTFFCQMVEKGF-----EISIRDYTKS--FFCMMLSNGFPP 606
           +H+    + +M ++G       +S  D T S      MLS G+ P
Sbjct: 589 LHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAP 633



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 163/706 (23%), Positives = 313/706 (44%), Gaps = 70/706 (9%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           ++DA+ + + M +     SI  +N LL     L+  D++  L   ++V     ++YT +I
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           VI+  C   ++  A+  L +     + P  V++ ++++ +C+      A  L   M++ G
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  +YN +I  LC    + +A +F  ++ R G+ P+ +TY+ L  G    S+ S A 
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +++  ++ K   P+++TY+ L+  + + G V E  +L E M+      +++ YS L++ +
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C   RIDEA  +   M + G   D+V+Y+ LI G CK  +V   ++L+ EM  + +  N+
Sbjct: 409 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  ++ G  +   + +A+ +F  +       D+  YNI++ G    G + +A+ ++  
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 528

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + ++ +   IVT+ ++I G CK GKV +A  L  ++ L GL+P  VTYTT M+  C +G 
Sbjct: 529 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 588

Query: 429 IQRLLALLQEMETKAI---------GPTHVTYTVVIK----------------GLCK--- 460
           +  + AL  +M+ + +         G   ++  ++ K                G+CK   
Sbjct: 589 LHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKAL 648

Query: 461 ------------------------QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
                                   + KL +AV L  +M      P  I ++ ++ +  K 
Sbjct: 649 SLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKM 708

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
                   L  QM    +     TY+ILI+  C    L  A  +L  + +       V  
Sbjct: 709 NKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTL 768

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLS 601
           ++++  +C    + +A+    QM   G++ +   +                 +    M++
Sbjct: 769 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVA 828

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            G  PD     V++    + GD    F L   M +  L P   + N
Sbjct: 829 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 874



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 30   SIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
            +I TYN+LL  L     +     +++ ++ S+    +YT +I+I+G+C+  +++D     
Sbjct: 1079 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 1138

Query: 87   QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
               + K   P VV+ N ++S +C+ G  E A  LF  M + G  P++  YN LI      
Sbjct: 1139 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 1198

Query: 147  GSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
            G  E + E   +M   G   DA T  ++    H
Sbjct: 1199 GDREASAELIKEMRSCGFAGDASTIGLVTNMLH 1231


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 168/610 (27%), Positives = 283/610 (46%), Gaps = 32/610 (5%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL+ D+  S    +V     ++  + +  R    I   Q+   K+    + S N ++  +
Sbjct: 65  DLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCF 124

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           C       A   F  + K GLHPD  ++  L+HGLC+   + EAL+F + M      P+ 
Sbjct: 125 CSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNV 184

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LRE 227
           +T++ L  G     +I  A  ++ +++  G  P  +TY  ++ G C+ G+    L  LR+
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
           +        NV+ YS ++ S+CK GR  +A  L  EM+  G+ PDL TY+ +I G C   
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +   A QL  EM  ++ISP+   + A++    ++    EA   +D ++    I + + YN
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYN 364

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            MIDG+ K   +  A  ++  +  K  SP + TF +LI G+C   ++ D   LL  +   
Sbjct: 365 SMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRR 424

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           GL  + VTY T ++ +C  G++   L L Q+M +  + P  VT   ++ GLC   KL++A
Sbjct: 425 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 484

Query: 468 VQLLEDMY-----------VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           +++ + M              GV PD +TYN +I          +A +L  +M    + P
Sbjct: 485 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 544

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            + TY+ +IDGLC    L  A  + VS+   + S   V + T+I  +C  G V   +  F
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 604

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           C+M  +                    G   D  I   ++  F + G++    ++   MI 
Sbjct: 605 CEMGRR--------------------GIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 644

Query: 637 SGLLPDKFLI 646
           SG+ PD   I
Sbjct: 645 SGVYPDTITI 654



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 150/575 (26%), Positives = 271/575 (47%), Gaps = 15/575 (2%)

Query: 37  LLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGP 96
           ++  +   D++  LY  ++  +   ++Y+ +I+I   C  S+L  A+    +       P
Sbjct: 88  VVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHP 147

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
            VV+   ++   C       A   F  M +    P+  ++  L++GLC  G + EA+   
Sbjct: 148 DVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL-LIKGSDPDIVTYTVLICGYCQ 215
           + M   G++P  ITY  +  G         A  +++K+  +    P++V Y+ +I   C+
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCK 267

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G   +   L   M  +G   ++  Y+ ++   C SGR  +A  LL EM    + PD+VT
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI    K+ K  +A +LY+EM  + I PN+  + +++ G C+++ +  A   F  + 
Sbjct: 328 YNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 387

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C  DV  +  +IDGY     I + ++L  ++  + +  + VT+N+LI+GFC  G + 
Sbjct: 388 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 447

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET-----------KAI 444
            A  L   +   G+ P  VT  T ++  C+ G ++  L + + M+              +
Sbjct: 448 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGV 507

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  +TY ++I GL  + K  EA +L E+M   G+ PD ITY+++I   CK   L +A Q
Sbjct: 508 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           +   M   +  P   T+N LI+G C  G + +   L   +    I    + Y T+I    
Sbjct: 568 MFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 627

Query: 565 AEGDVHKAMTFFCQMVEKGF---EISIRDYTKSFF 596
             G+++ A+  F +M+  G     I+IR+    F+
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGFW 662



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 239/482 (49%), Gaps = 15/482 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMWDLYDDIKVSETPR---NV 63
           R G + +AV ++ +M E  L+ +  TY +++  + +  D +  L    K+ E      NV
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
              S +ID LC+  R  DA     E   K   P + + N+++  +C  G    A+ L   
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           ML+  + PD  +YN LI+     G   EA E  ++M   G+ P+ ITY+ +  GF    +
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 375

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A  +   +  KG  PD+ T+T LI GYC    +++G++L   M  +G   N + Y+ 
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+   C  G ++ AL L  +M + G+ PD+VT + L+ GLC   K+  A++++  M   +
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495

Query: 304 -----------ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
                      + P+   +  ++ GL  +    EA   ++ +     + D + Y+ MIDG
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
             K   + EA Q++  +  K  SP++VTFN+LI G+CK G+V D   L   +   G+   
Sbjct: 556 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 615

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
           A+ Y T +  + + GNI   L + QEM +  + P  +T   ++ G   + +L+ AV +LE
Sbjct: 616 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 675

Query: 473 DM 474
           D+
Sbjct: 676 DL 677



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 137/546 (25%), Positives = 258/546 (47%), Gaps = 15/546 (2%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVID 71
           A+    K+ +L L   + T+ +LL+ L   D +    D +  +  +    NV T + +++
Sbjct: 133 ALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMN 192

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LH 130
           GLC++ R+ +A+  L         P+ ++   I+   CK G    A  L   M +   + 
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+   Y+ +I  LC  G   +A     +M   G+ PD  TY+ +  GF    + S A ++
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           +Q++L +   PD+VTY  LI  + + G   E  +L + ML +G   N I Y+ ++   CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 372

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             R+D A  + Y M   G  PD+ T++ LI G C   ++   ++L +EM  + +  N+  
Sbjct: 373 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 432

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C    +  A      +I S    D+V  N ++DG    G + +A+++++ + 
Sbjct: 433 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 492

Query: 371 EKR-----------ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           + +           + P ++T+N LI G    GK  +A  L + +   G+ P  +TY++ 
Sbjct: 493 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C++  +     +   M +K+  P  VT+  +I G CK  ++ + ++L  +M   G+
Sbjct: 553 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             D I Y T+I  F K  ++  A  +  +M    + P + T   ++ G     +L+ A  
Sbjct: 613 VADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVA 672

Query: 540 LLVSLQ 545
           +L  LQ
Sbjct: 673 MLEDLQ 678



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 212/414 (51%), Gaps = 16/414 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
           + G   DA  +  +M+E  +   + TYNS++       R +D    L + ++   +P +V
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP-DV 325

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +I+   ++ +  +A     E   +   P+ ++ N+++  +CK    + A+ +F L
Sbjct: 326 VTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYL 385

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G  PD F++  LI G C A  +++ +E  ++M R G+  + +TY+ L  GF L+  
Sbjct: 386 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 445

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS-----------Q 232
           ++ A  + Q+++  G  PDIVT   L+ G C  G +++ L++ + M              
Sbjct: 446 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 505

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G + +V+ Y++L+  +   G+  EA  L  EM   G+ PD +TYS +I GLCKQ ++ +A
Sbjct: 506 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            Q++  M SK  SPN      ++ G C+   + +    F  +     + D ++Y  +I G
Sbjct: 566 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 625

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           + K+GNI  A+ +++++I   + P  +T  +++ GF    ++  A  +L+ +++
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQM 679



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 157/319 (49%), Gaps = 14/319 (4%)

Query: 33  TYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYNS++         D   D++  +       +V+T + +IDG C   R+ D +  L E 
Sbjct: 362 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 421

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             +    + V+ N ++  +C +G    A  L   M+  G+ PD  + N L+ GLC  G +
Sbjct: 422 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 481

Query: 150 EEALEFTNDMGR-----------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           ++ALE    M +           +GVEPD +TY+IL  G     +   A ++ +++  +G
Sbjct: 482 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 541

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD +TY+ +I G C+   ++E  ++   M S+ F  NV+ ++ L++  CK+GR+D+ L
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 601

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L  EM   G+  D + Y  LI G  K   ++ A+ ++ EM S  + P++     +L G 
Sbjct: 602 ELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 661

Query: 319 CEKEMITEARMYFDSLIMS 337
             KE +  A    + L MS
Sbjct: 662 WSKEELERAVAMLEDLQMS 680



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 149/332 (44%), Gaps = 21/332 (6%)

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           G  E + + +A   F  ++ S  +  VV +  ++   V++      + LY+++  K+I  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            I +FN LI  FC   K+  A      I   GL P  VT+TT ++  C E  +   L   
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
            +M      P  VT+T ++ GLC++ ++ EAV LL+ M   G+ P QITY TI+   CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 497 KDLRKAFQLLNQMW-LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
            D   A  LL +M  + ++ P    Y+ +ID LC +G   +A  L   +QE  I      
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
           Y ++I   C+ G    A     +M+E+  +IS                  PD      ++
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLER--KIS------------------PDVVTYNALI 332

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            AF + G      EL   M+  G++P+    N
Sbjct: 333 NAFVKEGKFFEAAELYDEMLPRGIIPNTITYN 364


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 258/472 (54%), Gaps = 3/472 (0%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           L +   L+D   FL+    +   P ++   +++  +C++G  + A  +  ++ + G  PD
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
             +YN+LI G C +G ++ AL+    + R  V PD +TY+ + +      ++  A +V+ 
Sbjct: 127 VITYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           + L K   PD++TYT+LI   C+   V + +KL + M ++G K +V+ Y+VL++ +CK G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           R+DEA+  L  M + G +P+++T++I++R +C   +   A +L ++M  K  SP+     
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC + ++  A    + + M  C  + + YN ++ G+ K   +  A++    ++ +
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P IVT+N+L+   CK+GKV  A  +L+ +   G  P  +TY T ++   + G  +R 
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           + LL EM  K + P  +TY+ ++ GL ++ K+ EA++   D+  +G+ P+ ITYN+I+  
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 483

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            CK +   +A   L  M     +PT ATY ILI+G+   G  K A  LL  L
Sbjct: 484 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 535



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 241/457 (52%), Gaps = 3/457 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I G C+  + + A   ++        P V++ N ++S YCK G  E+   L  L  +  
Sbjct: 98  LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSG--EIDNALQVLD-RMN 154

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + PD  +YN ++  LC +G +++A+E  +   +    PD ITY+IL +     S +  A 
Sbjct: 155 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 214

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           K++ ++  KGS PD+VTY VLI G C+ G ++E +K    M S G + NVI ++++L SM
Sbjct: 215 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 274

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C +GR  +A  LL +M   G  P +VT++ILI  LC+Q  + +AI +  +M     +PNS
Sbjct: 275 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 334

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
            ++  +L G C+++ +  A  Y D ++   C  D+V YN ++    K G +  AV++  Q
Sbjct: 335 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 394

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           L  K  SP ++T+N++I G  K GK   A +LLD ++  GL+P  +TY++ ++    EG 
Sbjct: 395 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 454

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +   +    ++E   I P  +TY  ++ GLCK  +   A+  L  M      P + TY  
Sbjct: 455 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 514

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           +I         ++A  LLN++    L   S+   + +
Sbjct: 515 LIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAV 551



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 236/461 (51%), Gaps = 3/461 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G  PD      LI G C  G  ++A      + + G  PD ITY++L  G+    +
Sbjct: 83  MVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGE 142

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I  A +V+ ++ +    PD+VTY  ++   C  G +++ +++ +  L +    +VI Y++
Sbjct: 143 IDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTI 199

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+ + CK   + +A+ LL EM   G KPD+VTY++LI G+CK+ ++ +AI+  N M S  
Sbjct: 200 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 259

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN   H  IL  +C      +A      ++   C   VV +NI+I+   + G +G A+
Sbjct: 260 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 319

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +  ++     +P+ +++N L++GFCK  K+  A   LD +   G  P  VTY T + A 
Sbjct: 320 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 379

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++G +   + +L ++ +K   P  +TY  VI GL K  K + A++LL++M   G+ PD 
Sbjct: 380 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 439

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           ITY++++    +   + +A +  + +    + P + TYN ++ GLC +     A   L  
Sbjct: 440 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 499

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +       T+  YT +I+    EG   +A+    ++  +G 
Sbjct: 500 MISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 233/446 (52%), Gaps = 3/446 (0%)

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G +E+  +F   M   G  PD I  + L +GF  + +   A  V++ L   G+ PD++TY
Sbjct: 71  GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 130

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            VLI GYC+ G ++  L++ + M       +V+ Y+ +L ++C SG++ +A+ +L     
Sbjct: 131 NVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 187

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
               PD++TY+ILI   CK+  V +A++L +EM +K   P+   +  ++ G+C++  + E
Sbjct: 188 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 247

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A  + +++    C  +V+ +NI++      G   +A +L   ++ K  SPS+VTFN LI 
Sbjct: 248 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 307

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             C+ G +  A  +L+ + +HG  P++++Y   ++ +C+E  + R +  L  M ++   P
Sbjct: 308 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 367

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             VTY  ++  LCK  K+  AV++L  +   G +P  ITYNT+I    K     +A +LL
Sbjct: 368 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 427

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           ++M    L+P   TY+ L+ GL   G +  A      L+   I    + Y +I+   C  
Sbjct: 428 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 487

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYT 592
               +A+ F   M+ K  + +   YT
Sbjct: 488 RQTDRAIDFLAYMISKRCKPTEATYT 513



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 233/477 (48%), Gaps = 41/477 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           + R G    A +V+  +++      + TYN L+     +   D    + D + V+    +
Sbjct: 102 FCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAP---D 158

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + ++  LC   +L+ A+  L     KE  P V++   ++   CK      A  L  
Sbjct: 159 VVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLD 218

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G  PD  +YN+LI+G+C  G ++EA++F N+M  +G +P+ IT++I+ +      
Sbjct: 219 EMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTG 278

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A K++  +L KG  P +VT+ +LI   C+ G +   + + E M   G   N ++Y+
Sbjct: 279 RWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYN 338

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            LL   CK  ++D A+  L  M + G  PD+VTY+ L+  LCK  KV  A+++ N++ SK
Sbjct: 339 PLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 398

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             SP                                    ++ YN +IDG  K+G    A
Sbjct: 399 GCSPV-----------------------------------LITYNTVIDGLSKVGKTERA 423

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++L  ++  K + P I+T++SL+ G  + GKV +A +    ++  G+ P+A+TY + M  
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 483

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
            C+     R +  L  M +K   PT  TYT++I+G+  +   +EA+ LL ++   G+
Sbjct: 484 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 176/380 (46%), Gaps = 32/380 (8%)

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL--------- 295
           L  + ++G +++    L  M   G  PD++  + LIRG C+  K  KA  +         
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 296 ------YNEMCSK-----------------RISPNSFAHGAILLGLCEKEMITEARMYFD 332
                 YN + S                   ++P+   +  IL  LC+   + +A    D
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
             +   C  DV+ Y I+I+   K   +G+A++L  ++  K   P +VT+N LI G CK G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           ++ +A + L+ +  +G +P+ +T+   + + C  G       LL +M  K   P+ VT+ 
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
           ++I  LC+Q  L  A+ +LE M + G TP+ ++YN ++  FCK K + +A + L+ M   
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
              P   TYN L+  LC +G +  A  +L  L     S   + Y T+I      G   +A
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423

Query: 573 MTFFCQMVEKGFEISIRDYT 592
           +    +M  KG +  I  Y+
Sbjct: 424 IKLLDEMRRKGLKPDIITYS 443



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 18/273 (6%)

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           +NG++ D  + L+++   G  P  +  T+ +  +C  G  ++   +++ +E     P  +
Sbjct: 69  RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY V+I G CK  ++  A+Q+L+ M    V PD +TYNTI+R+ C    L++A ++L++ 
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 185

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
                 P   TY ILI+  C    +  A  LL  ++        V Y  +I   C EG +
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245

Query: 570 HKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVM 614
            +A+ F   M   G + ++  +                +     ML  G  P      ++
Sbjct: 246 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 305

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +    + G LG   ++   M   G  P+    N
Sbjct: 306 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYN 338


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 166/583 (28%), Positives = 276/583 (47%), Gaps = 38/583 (6%)

Query: 6   YSRTGMVHDAV-FVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
           Y+R     DAV  V  ++    ++     YN LL  L       ++  +Y+++       
Sbjct: 134 YARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQP 193

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T + +I  LC+  +++ A+L L+E +     P   +   +M  + + G  E A  + 
Sbjct: 194 DVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVK 253

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M++ G  P   + N+LI+G C  G +E+AL +       G EPD +TY+         
Sbjct: 254 TKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQN 313

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +S A KV+  +L +G DPD+ TY  +I    + G ++E   +   M+ +G   +   +
Sbjct: 314 GHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTF 373

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+ ++C   R++EAL L  E+   GL PD+ T++ILI  LCK    H  I+L+ EM S
Sbjct: 374 NTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKS 433

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
              +P+   +  ++  LC    +  A      +  + C +  V YN +ID   K   I E
Sbjct: 434 SGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEE 493

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +++ Q+    IS S VTFN+LI G CK  ++ DA  L++ +   GL+PS +TY + + 
Sbjct: 494 AEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILT 553

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC++G++++   +L+ M         VTY  +I GLCK  + Q A++LL  M + G+ P
Sbjct: 554 HYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRP 613

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
               YN +I+S  +  +LR A  L  +M      P + TY I+  GLC  G         
Sbjct: 614 TPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGG--------- 664

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
                                    G + +A  F  +MV KGF
Sbjct: 665 -------------------------GPIKEAFDFLVEMVNKGF 682



 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 165/599 (27%), Positives = 279/599 (46%), Gaps = 19/599 (3%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           R VY   I   G      L + ++      G E G  VV   + +  Y +L   + A  L
Sbjct: 89  RAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVV--RSFVESYARLRRFDDAVDL 146

Query: 121 FCLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
               L  +G+  D   YN L++ L     M+      N+M   G++PD +T + L K   
Sbjct: 147 VRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALC 206

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              Q+  A  +++++      PD  T+T L+ G+ + G++E  L+++  M+  G     +
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRV 266

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
             +VL++  CK GR+++ALG + +  A G +PD VTY+  +  LC+   V  A+++ + M
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLM 326

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             +   P+ F +  ++  L +   + EA+   + ++   C+ D   +N +I        +
Sbjct: 327 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRL 386

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA+ L R+L  K +SP + TFN LI   CK G      RL + +K  G  P  VTY   
Sbjct: 387 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNIL 446

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C  G +   L LL+EME+     + VTY  +I  LCKQ +++EA ++ + M   G+
Sbjct: 447 IDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGI 506

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +   +T+NT+I   CK K +  A +L+ QM    L+P++ TYN ++   C  GDLK A  
Sbjct: 507 SRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAAD 566

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------ 593
           +L ++  +   +  V Y T+I   C  G    A+     M  KG   + + Y        
Sbjct: 567 ILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLF 626

Query: 594 ---------SFFCMMLSNGFPPDQEICEVMLIAF-HQGGDLGSVFELAAVMIKSGLLPD 642
                    S F  M   G PPD    +++       GG +   F+    M+  G +P+
Sbjct: 627 RRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPE 685



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 140/306 (45%), Gaps = 20/306 (6%)

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D  +YN +++   +   +     +Y ++ ++ I P +VT N+LI   C+  +V  A  +L
Sbjct: 159 DTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLML 218

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           + +  H + P   T+TT M  + EEG+I+  L +  +M      PT VT  V+I G CK 
Sbjct: 219 EEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKM 278

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++++A+  ++     G  PDQ+TYNT +   C+   +  A ++++ M     +P   TY
Sbjct: 279 GRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTY 338

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N +I+ L  NG+L  A  ++  + +         + T+I A C++  + +A+    ++  
Sbjct: 339 NTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTV 398

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           KG                      PD     +++ A  + GD      L   M  SG  P
Sbjct: 399 KGLS--------------------PDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAP 438

Query: 642 DKFLIN 647
           D+   N
Sbjct: 439 DEVTYN 444



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 132/301 (43%), Gaps = 25/301 (8%)

Query: 350 IDGYVKLGNIGEAVQLYR-QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           ++ Y +L    +AV L R QL    +      +N L+    +  ++     + + +   G
Sbjct: 131 VESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRG 190

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           ++P  VT  T + A C    ++  + +L+EM + A+ P   T+T +++G  ++  ++ A+
Sbjct: 191 IQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAAL 250

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           ++   M   G +P ++T N +I  +CK   +  A   + +      EP   TYN  +  L
Sbjct: 251 RVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCL 310

Query: 529 CVNGDLKNA-DCLLVSLQE-HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           C NG + +A   + + LQE H+  +    Y T+I      G++ +A     QMV++G   
Sbjct: 311 CQNGHVSHALKVMDLMLQEGHDPDV--FTYNTVINCLSKNGELDEAKGIVNQMVDRG--- 365

Query: 587 SIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
                     C+       PD      +++A      L    +LA  +   GL PD +  
Sbjct: 366 ----------CL-------PDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTF 408

Query: 647 N 647
           N
Sbjct: 409 N 409



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/284 (20%), Positives = 113/284 (39%), Gaps = 21/284 (7%)

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L   L  +  +PS   +  +I      G       L+  ++  G E  A    +F+ +Y 
Sbjct: 76  LNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYA 135

Query: 425 EEGNIQRLLALLQ-EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
                   + L++ ++ T  +      Y  ++  L +  +++    +  +M   G+ PD 
Sbjct: 136 RLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDV 195

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +T NT+I++ C+   +R A  +L +M  H + P   T+  L+ G    G ++ A  +   
Sbjct: 196 VTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTK 255

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           + E   S T+V    +I  +C  G V  A+ +  + +  GFE                  
Sbjct: 256 MMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFE------------------ 297

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             PDQ      +    Q G +    ++  +M++ G  PD F  N
Sbjct: 298 --PDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYN 339


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 166/532 (31%), Positives = 271/532 (50%), Gaps = 16/532 (3%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVS-----ET 59
           V    GM+ +A  +  KM    L +S+ + N  + +L       DL D IK++     E 
Sbjct: 191 VLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSE-----DL-DGIKIALKVFVEF 244

Query: 60  PR-----NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           P      N  + +I+   LCQ  R+ +A   L +   +   P V+S + +++ YC++G  
Sbjct: 245 PEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGEL 304

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           +    L   M   GL P+ ++YN +I  LC  G + EA     +M   G+ PD + Y+ L
Sbjct: 305 QRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 364

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             GF  L  +S A+++  ++  +   PD +TYT +ICG CQ G V E  KL   M+ +  
Sbjct: 365 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 424

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           + + + Y+ L+   CK G++ EA  L  +M  +GL P++VTY+ L  GLCK  +V  A +
Sbjct: 425 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 484

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L +EMC K +  N + + +++ GLC+   I +A      + ++    D V Y  ++D Y 
Sbjct: 485 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 544

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K   +  A +L RQ++++ + P++VTFN L+ GFC +G + D  +LL  +   G+ P+A 
Sbjct: 545 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 604

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TY + +  YC   N++    + + M  K + P   TY ++IKG CK   ++EA  L  DM
Sbjct: 605 TYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM 664

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
              G      +YN +I+ F K K   +A +L  QM    L      YNI  D
Sbjct: 665 VGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 716



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 151/489 (30%), Positives = 256/489 (52%), Gaps = 1/489 (0%)

Query: 97  SVVSLNAIMSRYCK-LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           SV S N  +S   + L   ++A  +F    + G+  +  SYNI+ H LC  G + EA + 
Sbjct: 216 SVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQL 275

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M   G  PD I+YS +  G+  + ++    K+I+++ IKG  P+  TY  +I   C+
Sbjct: 276 LLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCK 335

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G V E  ++   M+S+G   + + Y+ L+   CK G +  A  L  EM+   + PD +T
Sbjct: 336 TGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFIT 395

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ +I GLC+  +V +A +L++EM  KR+ P+   + A++ G C++  + EA    + ++
Sbjct: 396 YTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQML 455

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 ++V Y  + DG  K G +  A +L  ++  K +  +I T+NSL+ G CK G + 
Sbjct: 456 QMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNID 515

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A +L+  +++ G  P AVTYTT M+AYC+   + R   LL++M  + + PT VT+ V++
Sbjct: 516 QAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLM 575

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G C    L++  +LL+ M   G+ P+  TYN++I+ +C   ++R   ++   M    + 
Sbjct: 576 NGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVV 635

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TYNILI G C   ++K A  L   +     +LT  +Y  +IK         +A   
Sbjct: 636 PDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEAREL 695

Query: 576 FCQMVEKGF 584
           F QM  +G 
Sbjct: 696 FEQMRREGL 704



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 241/486 (49%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           +  S N I    C+LG    A  L   M   G  PD  SY+ +I+G C  G ++  L+  
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
            +M   G++P+  TY+ +        +++ A +V+++++ +G  PD V YT LI G+C++
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           GNV    +L + M  +    + I Y+ ++  +C++GR+ EA  L +EM    L+PD VTY
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + LI G CK+ K+ +A  L+N+M    ++PN   + A+  GLC+   +  A      +  
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                ++  YN +++G  K GNI +AV+L + +      P  VT+ +L+  +CK+ ++  
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 551

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  LL  +    L+P+ VT+   MN +C  G ++    LL+ M  K I P   TY  +IK
Sbjct: 552 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 611

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
             C +  ++   ++   M   GV PD  TYN +I+  CK +++++A+ L   M       
Sbjct: 612 QYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNL 671

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           T ++YN LI G         A  L   ++   +   +  Y      +  EG +   +   
Sbjct: 672 TVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELC 731

Query: 577 CQMVEK 582
            + +EK
Sbjct: 732 DEAIEK 737



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 164/585 (28%), Positives = 275/585 (47%), Gaps = 57/585 (9%)

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           + F    + L      +G  P  F  +I    L  AG ++EA +  + M  +G+     +
Sbjct: 162 VSFGHFVEQLIYTYKDWGSDPRVF--DIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDS 219

Query: 171 YSILAKGFHLLSQISG---AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            ++     HL   + G   A KV  +    G   +  +Y ++    CQ+G V E  +L  
Sbjct: 220 CNLFIS--HLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLL 277

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M  +G   +VI+YS +++  C+ G +   L L+ EM+  GLKP+  TY+ +I  LCK  
Sbjct: 278 QMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTG 337

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           KV +A ++  EM S+ I+P+   +  ++ G C+   ++ A   FD +       D + Y 
Sbjct: 338 KVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYT 397

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I G  + G + EA +L+ +++ KR+ P  VT+ +LI G+CK GK+ +A  L + +   
Sbjct: 398 AVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQM 457

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           GL P+ VTYT   +  C+ G +     LL EM  K +     TY  ++ GLCK   + +A
Sbjct: 458 GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQA 517

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           V+L++DM V G  PD +TY T++ ++CK +++ +A +LL QM    L+PT  T+N+L++G
Sbjct: 518 VKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNG 577

Query: 528 LCVNGDLKNADCLLVSLQEHNI--------SLTKV------------------------- 554
            C++G L++ + LL  + E  I        SL K                          
Sbjct: 578 FCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPD 637

Query: 555 --AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFC 597
              Y  +IK HC   ++ +A      MV KGF +++  Y                +  F 
Sbjct: 638 GNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFE 697

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            M   G   D+EI  +     +  G +    EL    I+  L+ D
Sbjct: 698 QMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGD 742



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 209/425 (49%), Gaps = 37/425 (8%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L +++++     N YT + VI  LC+  ++ +A   L+E   +   P  V    ++  +C
Sbjct: 310 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 369

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           KLG    A  LF  M K  + PD  +Y  +I GLC  G + EA +  ++M    +EPD +
Sbjct: 370 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 429

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           TY+ L  G+    ++  A+ +  ++L  G  P+IVTYT L  G C+ G V+   +L   M
Sbjct: 430 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 489

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
             +G +LN+  Y+ L++ +CK+G ID+A+ L+ +ME  G  PD VTY+ L+   CK  ++
Sbjct: 490 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 549

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLC----------------EKEMITEARMYFDS 333
            +A +L  +M  + + P       ++ G C                EK ++  A  Y +S
Sbjct: 550 VRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTY-NS 608

Query: 334 LIMSNCIQ--------------------DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           LI   CI+                    D   YNI+I G+ K  N+ EA  L+R ++ K 
Sbjct: 609 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 668

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
            + ++ ++N+LI GF K  K  +AR L + ++  GL      Y  F +   +EG ++  L
Sbjct: 669 FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTL 728

Query: 434 ALLQE 438
            L  E
Sbjct: 729 ELCDE 733



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 204/423 (48%), Gaps = 16/423 (3%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ-DKVHKAIQLYNEM 299
           + +    + ++G +DEA  L  +M   GL   + + ++ I  L +  D +  A++++ E 
Sbjct: 185 FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEF 244

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               +  N+ ++  I   LC+   + EA      + +  CI DV+ Y+ +I+GY ++G +
Sbjct: 245 PEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGEL 304

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
              ++L  ++  K + P+  T+N +I   CK GKVA+A R+L  +   G+ P  V YTT 
Sbjct: 305 QRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 364

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ +C+ GN+     L  EM+ + I P  +TYT VI GLC+  ++ EA +L  +M    +
Sbjct: 365 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 424

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD++TY  +I  +CK   +++AF L NQM    L P   TY  L DGLC  G++  A+ 
Sbjct: 425 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 484

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC 597
           LL  +    + L    Y +++   C  G++ +A+     M   GF      YT     +C
Sbjct: 485 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 544

Query: 598 -------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                         ML     P      V++  F   G L    +L   M++ G++P+  
Sbjct: 545 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 604

Query: 645 LIN 647
             N
Sbjct: 605 TYN 607



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 192/381 (50%), Gaps = 3/381 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           + + G V  A  +  +M++  +     TY +++  L  T  + +   L+ ++       +
Sbjct: 368 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 427

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +IDG C++ ++++A     +       P++V+  A+    CK G  + A  L  
Sbjct: 428 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 487

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + GL  + ++YN L++GLC AG++++A++   DM   G  PDA+TY+ L   +    
Sbjct: 488 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 547

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A ++++++L +   P +VT+ VL+ G+C  G +E+G KL + ML +G   N   Y+
Sbjct: 548 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 607

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C    +     +   M A G+ PD  TY+ILI+G CK   + +A  L+ +M  K
Sbjct: 608 SLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGK 667

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             +    ++ A++ G  +++   EAR  F+ +     + D  +YNI  D     G +   
Sbjct: 668 GFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELT 727

Query: 363 VQLYRQLIEKRISPSIVTFNS 383
           ++L  + IEK +   I T N+
Sbjct: 728 LELCDEAIEKCLVGDIQTKNT 748


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 258/472 (54%), Gaps = 3/472 (0%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           L +   L+D   FL+    +   P ++   +++  +C++G  + A  +  ++ + G  PD
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
             +YN+LI G C +G ++ AL+    + R  V PD +TY+ + +      ++  A +V+ 
Sbjct: 184 VITYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           + L K   PD++TYT+LI   C+   V + +KL + M ++G K +V+ Y+VL++ +CK G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           R+DEA+  L  M + G +P+++T++I++R +C   +   A +L ++M  K  SP+     
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC + ++  A    + + M  C  + + YN ++ G+ K   +  A++    ++ +
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P IVT+N+L+   CK+GKV  A  +L+ +   G  P  +TY T ++   + G  +R 
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           + LL EM  K + P  +TY+ ++ GL ++ K+ EA++   D+  +G+ P+ ITYN+I+  
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 540

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            CK +   +A   L  M     +PT ATY ILI+G+   G  K A  LL  L
Sbjct: 541 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 592



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 241/457 (52%), Gaps = 3/457 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I G C+  + + A   ++        P V++ N ++S YCK G  E+   L  L  +  
Sbjct: 155 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSG--EIDNALQVLD-RMN 211

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + PD  +YN ++  LC +G +++A+E  +   +    PD ITY+IL +     S +  A 
Sbjct: 212 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 271

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           K++ ++  KGS PD+VTY VLI G C+ G ++E +K    M S G + NVI ++++L SM
Sbjct: 272 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 331

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C +GR  +A  LL +M   G  P +VT++ILI  LC+Q  + +AI +  +M     +PNS
Sbjct: 332 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 391

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
            ++  +L G C+++ +  A  Y D ++   C  D+V YN ++    K G +  AV++  Q
Sbjct: 392 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 451

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           L  K  SP ++T+N++I G  K GK   A +LLD ++  GL+P  +TY++ ++    EG 
Sbjct: 452 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 511

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +   +    ++E   I P  +TY  ++ GLCK  +   A+  L  M      P + TY  
Sbjct: 512 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 571

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           +I         ++A  LLN++    L   S+   + +
Sbjct: 572 LIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAV 608



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 236/461 (51%), Gaps = 3/461 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G  PD      LI G C  G  ++A      + + G  PD ITY++L  G+    +
Sbjct: 140 MVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGE 199

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I  A +V+ ++ +    PD+VTY  ++   C  G +++ +++ +  L +    +VI Y++
Sbjct: 200 IDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTI 256

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+ + CK   + +A+ LL EM   G KPD+VTY++LI G+CK+ ++ +AI+  N M S  
Sbjct: 257 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 316

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN   H  IL  +C      +A      ++   C   VV +NI+I+   + G +G A+
Sbjct: 317 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 376

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +  ++     +P+ +++N L++GFCK  K+  A   LD +   G  P  VTY T + A 
Sbjct: 377 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 436

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++G +   + +L ++ +K   P  +TY  VI GL K  K + A++LL++M   G+ PD 
Sbjct: 437 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 496

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           ITY++++    +   + +A +  + +    + P + TYN ++ GLC +     A   L  
Sbjct: 497 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 556

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +       T+  YT +I+    EG   +A+    ++  +G 
Sbjct: 557 MISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 233/446 (52%), Gaps = 3/446 (0%)

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G +E+  +F   M   G  PD I  + L +GF  + +   A  V++ L   G+ PD++TY
Sbjct: 128 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 187

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            VLI GYC+ G ++  L++ + M       +V+ Y+ +L ++C SG++ +A+ +L     
Sbjct: 188 NVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 244

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
               PD++TY+ILI   CK+  V +A++L +EM +K   P+   +  ++ G+C++  + E
Sbjct: 245 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 304

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A  + +++    C  +V+ +NI++      G   +A +L   ++ K  SPS+VTFN LI 
Sbjct: 305 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 364

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             C+ G +  A  +L+ + +HG  P++++Y   ++ +C+E  + R +  L  M ++   P
Sbjct: 365 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 424

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             VTY  ++  LCK  K+  AV++L  +   G +P  ITYNT+I    K     +A +LL
Sbjct: 425 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 484

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           ++M    L+P   TY+ L+ GL   G +  A      L+   I    + Y +I+   C  
Sbjct: 485 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 544

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYT 592
               +A+ F   M+ K  + +   YT
Sbjct: 545 RQTDRAIDFLAYMISKRCKPTEATYT 570



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 233/477 (48%), Gaps = 41/477 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           + R G    A +V+  +++      + TYN L+     +   D    + D + V+    +
Sbjct: 159 FCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAP---D 215

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + ++  LC   +L+ A+  L     KE  P V++   ++   CK      A  L  
Sbjct: 216 VVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLD 275

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G  PD  +YN+LI+G+C  G ++EA++F N+M  +G +P+ IT++I+ +      
Sbjct: 276 EMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTG 335

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A K++  +L KG  P +VT+ +LI   C+ G +   + + E M   G   N ++Y+
Sbjct: 336 RWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYN 395

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            LL   CK  ++D A+  L  M + G  PD+VTY+ L+  LCK  KV  A+++ N++ SK
Sbjct: 396 PLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 455

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             SP                                    ++ YN +IDG  K+G    A
Sbjct: 456 GCSPV-----------------------------------LITYNTVIDGLSKVGKTERA 480

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++L  ++  K + P I+T++SL+ G  + GKV +A +    ++  G+ P+A+TY + M  
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 540

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
            C+     R +  L  M +K   PT  TYT++I+G+  +   +EA+ LL ++   G+
Sbjct: 541 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 176/380 (46%), Gaps = 32/380 (8%)

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL--------- 295
           L  + ++G +++    L  M   G  PD++  + LIRG C+  K  KA  +         
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 296 ------YNEMCSK-----------------RISPNSFAHGAILLGLCEKEMITEARMYFD 332
                 YN + S                   ++P+   +  IL  LC+   + +A    D
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
             +   C  DV+ Y I+I+   K   +G+A++L  ++  K   P +VT+N LI G CK G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           ++ +A + L+ +  +G +P+ +T+   + + C  G       LL +M  K   P+ VT+ 
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
           ++I  LC+Q  L  A+ +LE M + G TP+ ++YN ++  FCK K + +A + L+ M   
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
              P   TYN L+  LC +G +  A  +L  L     S   + Y T+I      G   +A
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480

Query: 573 MTFFCQMVEKGFEISIRDYT 592
           +    +M  KG +  I  Y+
Sbjct: 481 IKLLDEMRRKGLKPDIITYS 500



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 18/273 (6%)

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           +NG++ D  + L+++   G  P  +  T+ +  +C  G  ++   +++ +E     P  +
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY V+I G CK  ++  A+Q+L+ M    V PD +TYNTI+R+ C    L++A ++L++ 
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 242

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
                 P   TY ILI+  C    +  A  LL  ++        V Y  +I   C EG +
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302

Query: 570 HKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVM 614
            +A+ F   M   G + ++  +                +     ML  G  P      ++
Sbjct: 303 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 362

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +    + G LG   ++   M   G  P+    N
Sbjct: 363 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYN 395


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 260/542 (47%), Gaps = 14/542 (2%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  +   G   D F Y   I       +++  +EF + M + GV P+   Y++L  G  
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +I  A K+  ++        IVTY  LI GYC++G ++   K+RE M  +    N+I
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            ++ LLS +CK  ++ EA  LL EME  G  PD  TYSIL  GL + D  + A++LY + 
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQA 342

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K I  N++    +L GLC++  + +A         +  + D V+YN  ++GY ++G++
Sbjct: 343 TEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDM 402

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A+    ++    + P+ +TFNSLI  FC   ++  A   +  +   G+ PS  TY T 
Sbjct: 403 NKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTL 462

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ Y +     R   +L++ME   + P  V+Y  +I  LCK  K+ EA  +L DM   GV
Sbjct: 463 IDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGV 522

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+   YN +I   C    ++ A +  ++M    + PT  TYN+LIDGLC  G L  A+ 
Sbjct: 523 LPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAED 582

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY-------- 591
            L  +     S   + Y ++I  +   G+V K +  +  M   G + ++R Y        
Sbjct: 583 FLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCS 642

Query: 592 ------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                  +  +  ML     PD+ +   M+  + + G+    + L   M+  G+ PDK  
Sbjct: 643 KEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMT 702

Query: 646 IN 647
            N
Sbjct: 703 YN 704



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/625 (26%), Positives = 294/625 (47%), Gaps = 30/625 (4%)

Query: 22  MKELDLKVSIQTYNSLLYNL------RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQ 75
           M++  ++ ++  YN L+  L      R  + M+D   +I +  +   + T + +IDG C+
Sbjct: 202 MRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGS---IVTYNTLIDGYCK 258

Query: 76  QSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFS 135
              L  A    +    K   P++++ N+++S  CK+   + A+ L   M   G  PD ++
Sbjct: 259 VGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYT 318

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           Y+IL  GL        A+E        G+  +  T SIL  G     ++  A ++++K  
Sbjct: 319 YSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFT 378

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
             G   D V Y   + GYC+IG++ + +   E M S G + N I ++ L+   C    +D
Sbjct: 379 ENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMD 438

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           +A   + +M   G+ P + TY+ LI G  K     +  Q+  +M    + PN  ++G+++
Sbjct: 439 KAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLI 498

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
             LC+   I EA +    +I    + +  +YN++IDG   +G + +A++ + +++   IS
Sbjct: 499 NCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEIS 558

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P++VT+N LI G CK GK+ +A   L  I   G  P  +TY + ++ Y   GN+ + L L
Sbjct: 559 PTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGL 618

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
            + M+   I PT  TY  +I G C +  ++   +L  +M  + + PD++ YN +I  + +
Sbjct: 619 YETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAE 677

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
             + +KA+ L   M    + P   TYN LI G    G L N   L+ +++   ++     
Sbjct: 678 IGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADT 737

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
           Y  ++K HC   D   A  ++ +MVE                    N F P+  IC  + 
Sbjct: 738 YDILVKGHCDLKDFSGAYVWYREMVE--------------------NNFLPNASICNELT 777

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLL 640
               Q G L  V  + + M   G++
Sbjct: 778 AGLEQEGRLQEVQVICSEMNVKGII 802



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/533 (29%), Positives = 262/533 (49%), Gaps = 4/533 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G +  A  +  +MKE  +  +I T+NSLL  L   R       L  +++V+    +
Sbjct: 256 YCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPD 315

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            YT SI+ DGL +      A+   ++   K    +  + + +++  CK G  E A+ +  
Sbjct: 316 GYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILK 375

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
              + GL  D   YN  ++G C  G M +A+     M   G+ P++IT++ L   F  + 
Sbjct: 376 KFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMK 435

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A + ++K+  KG  P + TY  LI GY ++   +   ++ E M   G K NV++Y 
Sbjct: 436 EMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYG 495

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++ +CK G+I EA  +L +M   G+ P+   Y++LI G C   KV  A++ ++EM   
Sbjct: 496 SLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRS 555

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            ISP    +  ++ GLC+K  +TEA  +   +  S    DV+ YN +I GY   GN+ + 
Sbjct: 556 EISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKC 615

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + LY  +    I P++ T++ LI G  K G +    +L + +    L P  V Y   ++ 
Sbjct: 616 LGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHC 674

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           Y E GN Q+  +L Q M  + I P  +TY  +I G  ++ KL     L+ +M    + P 
Sbjct: 675 YAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPK 734

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             TY+ +++  C  KD   A+    +M  +N  P ++  N L  GL   G L+
Sbjct: 735 ADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQ 787



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 156/593 (26%), Positives = 273/593 (46%), Gaps = 21/593 (3%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL+ +I+ S    + +  +  I    +   L+  + FL     +   P+V   N ++   
Sbjct: 162 DLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGL 221

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           C+      A+ +F  M    L     +YN LI G C  G ++ A +    M    V P+ 
Sbjct: 222 CREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNI 281

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           IT++ L  G   + ++  A  +++++ + G  PD  TY++L  G  +  +    ++L E 
Sbjct: 282 ITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQ 341

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
              +G ++N    S+LL+ +CK G++++A  +L +    GL  D V Y+  + G C+   
Sbjct: 342 ATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGD 401

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           ++KAI     M S  + PNS    +++   C+ + + +A  +   +        V  YN 
Sbjct: 402 MNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNT 461

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDGY KL       Q+  Q+ E  + P++V++ SLI   CK+GK+ +A  +L  +   G
Sbjct: 462 LIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRG 521

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P+A  Y   ++  C  G ++  L    EM    I PT VTY V+I GLCK+ KL EA 
Sbjct: 522 VLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAE 581

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
             L  +   G +PD ITYN++I  +    ++ K   L   M    ++PT  TY+ LI G 
Sbjct: 582 DFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG- 640

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C    ++  + L   + + N+   +V Y  +I  +   G+  KA +     + +G     
Sbjct: 641 CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYS-----LHQG----- 690

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                     ML  G  PD+     +++   + G L ++ +L   M    L P
Sbjct: 691 ----------MLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAP 733



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 99/432 (22%), Positives = 193/432 (44%), Gaps = 19/432 (4%)

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           +++L Q    N  AYS+  S +           L     A  +   +    +L+   CK 
Sbjct: 62  QILLQQN--CNEAAYSLAKSLILTKSTFSSPSDLFSCFSACSIPLRITLSDMLLSVCCKS 119

Query: 287 DKVHKAIQLYNEMCSK-RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
             + +A++LY  M    ++             + EK+ +    ++ + +  S    D  +
Sbjct: 120 KMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFME-IENSGFRTDTFM 178

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y   I   VKL N+   ++    + ++ + P++  +N LI G C+  ++ DA ++ D + 
Sbjct: 179 YAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMC 238

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
              L  S VTY T ++ YC+ G +     + + M+ K++ P  +T+  ++ GLCK  K++
Sbjct: 239 NINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMK 298

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA  LL++M V G  PD  TY+ +     +C D   A +L  Q     +   + T +IL+
Sbjct: 299 EARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILL 358

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM-------TF--- 575
           +GLC  G ++ A+ +L    E+ +   +V Y T +  +C  GD++KA+       +F   
Sbjct: 359 NGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLR 418

Query: 576 -----FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
                F  +++K  ++   D  + +   M   G  P  E    ++  + +       F++
Sbjct: 419 PNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQI 478

Query: 631 AAVMIKSGLLPD 642
              M + G+ P+
Sbjct: 479 LEQMEEIGVKPN 490


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 262/488 (53%), Gaps = 3/488 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T +++I  LC+  +L+ AIL L++       P   +   IM  Y + G  + A  + 
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIR 247

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH-GVEPDAITYSILAKGFHL 180
             M+++G      S N+++HG C  G +E+AL F  +M    G  PD  T++ L  G   
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A +++  +L +G DPD+ TY  +I G C++G V+E ++  + M+++    N + 
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVT 367

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+S++CK  +++EA  L   + + G+ PD+ T++ LI+GLC       A++L+ EM 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           SK   P+ F +  ++  LC K  + EA      + +S C + V+ YN +IDG+ K   I 
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIR 487

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA +++ ++    +S + VT+N+LI G CK+ +V DA +L+D + + G +P   TY + +
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLL 547

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             +C  G+I++   ++Q M +    P  VTY  +I GLCK  +++ A +LL  + + G+ 
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIA 607

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN-LEPTSATYNILIDGLCV-NGDLKNAD 538
                YN +I+   + +   +A  L  +M   N   P + +Y I+  GLC   G ++ A 
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAV 667

Query: 539 CLLVSLQE 546
             LV L E
Sbjct: 668 DFLVELLE 675



 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 169/595 (28%), Positives = 300/595 (50%), Gaps = 13/595 (2%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLN 102
           D M  + +D+K S          I+I+   Q   LQD IL +      +FG  P     N
Sbjct: 100 DDMRKILEDMKNSGCEMGTSPFLILIESYAQ-FELQDEILGVVHWMIDDFGLKPDTHFYN 158

Query: 103 AIMSRYC---KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
            +++       L   E+A      M  +G+ PD  ++N+LI  LC A  +  A+    DM
Sbjct: 159 RMLNLLVDGNNLKLVEIAHAK---MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDM 215

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
             +G+ PD  T++ + +G+     + GA ++ ++++  G     V+  V++ G+C+ G V
Sbjct: 216 PSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRV 275

Query: 220 EEGLKLREVMLSQ-GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           E+ L   + M +Q GF  +   ++ L++ +CK+G +  A+ ++  M   G  PD+ TY+ 
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           +I GLCK  +V +A++  ++M ++  SPN+  +  ++  LC++  + EA      L    
Sbjct: 336 VISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
            + DV  +N +I G     N   A++L+ ++  K   P   T+N LI   C  GK+ +A 
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            +L  ++L G   S +TY T ++ +C+   I+    +  EME   +    VTY  +I GL
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK  ++++A QL++ M + G  PD+ TYN+++  FC+  D++KA  ++  M  +  EP  
Sbjct: 516 CKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TY  LI GLC  G ++ A  LL S+Q   I+LT  AY  +I+    +    +A+  F +
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFRE 635

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQG--GDLGSVFELA 631
           M+E+  E +    +       L NG  P +E  + ++    +G   +  S++ LA
Sbjct: 636 MLEQN-EAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLA 689



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 245/529 (46%), Gaps = 42/529 (7%)

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG---FHLLS 182
           K    P+   Y  ++  L  +GS ++  +   DM   G E     + IL +    F L  
Sbjct: 76  KPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQD 135

Query: 183 QISGA--WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV----MLSQGFKL 236
           +I G   W +       G  PD   Y  ++       N    LKL E+    M   G K 
Sbjct: 136 EILGVVHWMIDDF----GLKPDTHFYNRMLNLLVDGNN----LKLVEIAHAKMSVWGIKP 187

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +V  ++VL+ ++C++ ++  A+ +L +M + GL PD  T++ +++G  ++  +  A+++ 
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIR 247

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN---CIQDVVLYNIMIDGY 353
            +M     S ++ +   I+ G C++  + +A  +     MSN      D   +N +++G 
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE--MSNQDGFFPDQYTFNTLVNGL 305

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K G++  A+++   ++++   P + T+NS+I G CK G+V +A   LD +      P+ 
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNT 365

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTY T ++  C+E  ++    L + + +K I P   T+  +I+GLC     + A++L E+
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G  PD+ TYN +I S C    L +A  +L QM L     +  TYN LIDG C    
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           ++ A+ +   ++ H +S   V Y T+I   C    V  A     QM+ +G +        
Sbjct: 486 IREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQK-------- 537

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                       PD+     +L  F +GGD+    ++   M  +G  PD
Sbjct: 538 ------------PDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/368 (20%), Positives = 154/368 (41%), Gaps = 25/368 (6%)

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKR--ISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           L+  L  Q     A++L+N + SK+   SP    +  ILL L       + R   + +  
Sbjct: 53  LLDSLRSQADDSAALRLFN-LASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKN 111

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVA 395
           S C      + I+I+ Y +     E + +   +I+   + P    +N ++        + 
Sbjct: 112 SGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLK 171

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
                   + + G++P   T+   + A C    ++  + +L++M +  + P   T+T ++
Sbjct: 172 LVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIM 231

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN-L 514
           +G  ++  L  A+++ E M   G +   ++ N I+  FCK   +  A   + +M   +  
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P   T+N L++GLC  G +K+A  ++  + +         Y ++I   C  G+V +A+ 
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351

Query: 575 FFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
           F  QM+        RD +             P+      ++    +   +    ELA V+
Sbjct: 352 FLDQMI-------TRDCS-------------PNTVTYNTLISTLCKENQVEEATELARVL 391

Query: 635 IKSGLLPD 642
              G+LPD
Sbjct: 392 TSKGILPD 399



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 122/301 (40%), Gaps = 21/301 (6%)

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           ++D      +   A++L+    +K   SP    +  ++    ++G   D R++L+ +K  
Sbjct: 53  LLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNS 112

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQE 466
           G E     +   + +Y +      +L ++  M +   + P    Y  ++  L     L+ 
Sbjct: 113 GCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKL 172

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
                  M V G+ PD  T+N +I++ C+   LR A  +L  M  + L P   T+  ++ 
Sbjct: 173 VEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQ 232

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           G    GDL  A  +   + E   S + V+   I+   C EG V  A+ F  +M  +    
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ---- 288

Query: 587 SIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
                          +GF PDQ     ++    + G +    E+  VM++ G  PD +  
Sbjct: 289 ---------------DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTY 333

Query: 647 N 647
           N
Sbjct: 334 N 334



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 40/264 (15%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTN 66
           G + +A+ ++ +M+      S+ TYN+L+      + + +   ++D+++V    RN  T 
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTY 508

Query: 67  SIVIDGLCQQSRLQDAILFL-----------------------------------QETAG 91
           + +IDGLC+  R++DA   +                                   Q    
Sbjct: 509 NTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTS 568

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
               P +V+   ++S  CK G  EVA  L   +   G+     +YN +I GL       E
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTE 628

Query: 152 ALEFTNDM-GRHGVEPDAITYSILAKGF-HLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           A+    +M  ++   PDA++Y I+ +G  +    I  A   + +LL KG  P+  +  +L
Sbjct: 629 AINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688

Query: 210 ICGYCQIGNVEEGLKLREVMLSQG 233
             G   +   E  +KL  +++ + 
Sbjct: 689 AEGLLTLSMEETLVKLVNMVMQKA 712


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 191/691 (27%), Positives = 321/691 (46%), Gaps = 64/691 (9%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
           + S+ G V +A  +++++ + DL   + TY SL+      R+ D+ + ++D +       
Sbjct: 249 ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDP 308

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLN------------------- 102
           N  T S +I+GLC + R+ +A+  L+E   K   P+V +                     
Sbjct: 309 NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 368

Query: 103 ----------------AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
                           A++S   +LG  EVA GL+  MLK GL P+  +YN LI+ LC+ 
Sbjct: 369 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVG 428

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G    AL+  + M  HG   +  TY+ + KG  L   I  A  + +K+L  G  P +VTY
Sbjct: 429 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 488

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             LI GY   GNV    +L ++M   G + +   Y+ L+S   K G+++ A     EM  
Sbjct: 489 NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE 548

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            GL P+ V+Y+ LI G  K  KV  A+ L   M     +PN  ++ A++ GL ++   +E
Sbjct: 549 CGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSE 608

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A    D +     + +V+ Y  +IDG  + G    A +++  + +++  P++ T++SLIY
Sbjct: 609 AEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 668

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G C+ GK  +A  LL  ++  GL P  VT+T+ ++ +   G I     LL+ M      P
Sbjct: 669 GLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKP 728

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
            + TY+V++KGL K+  L E    ++   V   +P +   N  I S            LL
Sbjct: 729 NYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVS-----------NLL 777

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +M     EPT  TY+ L+ GLC  G    A+ L+  ++E      +  Y +++ AHC  
Sbjct: 778 ARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKN 837

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEIC 611
            +V  A+  F  +  KGF++ +  Y                ++ F  ML   +  D+ + 
Sbjct: 838 LEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVW 897

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            V++    + G+L    +L  +M      P+
Sbjct: 898 TVLVDGLLKEGELDLCMKLLHIMESKNFTPN 928



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 158/543 (29%), Positives = 268/543 (49%), Gaps = 35/543 (6%)

Query: 85  FLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
           FL E +G  FG S+ S N ++ +  K    E A+ L+  ML  G+ P   ++N LI+ L 
Sbjct: 192 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 251

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
             G + EA    + + ++ + PD  TY+ L  G      +  A+ V  +++ +G DP+ V
Sbjct: 252 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 311

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TY+ LI G C  G V+E L + E M+ +G +  V  Y++ ++++C     +EA+ L+  M
Sbjct: 312 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 371

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA----------- 313
           +  G +P++ TY+ LI GL +  K+  AI LY++M  + + PN+  + A           
Sbjct: 372 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 431

Query: 314 ------------------------ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
                                   I+ GLC    I +A + F+ ++    +  VV YN +
Sbjct: 432 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 491

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           I+GY+  GN+  A +L   + E    P   T+N L+ GF K GK+  A      +   GL
Sbjct: 492 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 551

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P+ V+YTT ++ + ++G +   L+LL+ ME     P   +Y  VI GL K+ +  EA +
Sbjct: 552 NPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEK 611

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           + + M   G+ P+ ITY T+I   C+    + AF++ + M      P   TY+ LI GLC
Sbjct: 612 ICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 671

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             G    A+ LL  ++   ++  +V +T++I      G +  A     +MV+ G + + R
Sbjct: 672 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYR 731

Query: 590 DYT 592
            Y+
Sbjct: 732 TYS 734



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 166/641 (25%), Positives = 304/641 (47%), Gaps = 64/641 (9%)

Query: 30  SIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           S+ + N+LL  L   +++    +LY  +  S    ++ T + +I+ L ++ ++++A L L
Sbjct: 204 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELIL 263

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            +    +  P V +  +++  +C+    ++A G+F  M+K G  P++ +Y+ LI+GLC  
Sbjct: 264 SQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNE 323

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G ++EAL+   +M   G+EP   TY++       +     A +++ ++  +G  P++ TY
Sbjct: 324 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTY 383

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T LI G  ++G +E  + L   ML +G   N + Y+ L++ +C  GR   AL + + ME 
Sbjct: 384 TALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG 443

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G   +  TY+ +I+GLC    + KA+ L+ +M      P    +  ++ G   K  +  
Sbjct: 444 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNN 503

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A    D +  + C  D   YN ++ G+ K G +  A   +++++E  ++P+ V++ +LI 
Sbjct: 504 AARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLID 563

Query: 387 GFCKNGKV-----------------------------------ADARRLLDTIKLHGLEP 411
           G  K+GKV                                   ++A ++ D +   GL P
Sbjct: 564 GHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLP 623

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + +TYTT ++  C  G  Q    +  +ME +   P   TY+ +I GLC++ K  EA  LL
Sbjct: 624 NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILL 683

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
           ++M   G+ PD++T+ ++I  F     +  AF LL +M     +P   TY++L+ GL   
Sbjct: 684 KEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGL--- 740

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
                 +CLL+   E  +++   A  +    H  + +         +M E G E ++  Y
Sbjct: 741 ----QKECLLL---EEKVAVQHEAVYS-FSPHEKDVNFEIVSNLLARMSEIGCEPTLDTY 792

Query: 592 TK--SFFCM-------------MLSNGFPPDQEICEVMLIA 617
           +   S  C              M   GF PD+EI   +LIA
Sbjct: 793 STLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIA 833



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 146/569 (25%), Positives = 253/569 (44%), Gaps = 62/569 (10%)

Query: 18  VIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           ++A+MK+   + ++QTY +L   L  L   ++   LY  +       N  T + +I+ LC
Sbjct: 367 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 426

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
              R   A+       G     +  + N I+   C  G  E A  LF  MLK G  P   
Sbjct: 427 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 486

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +YN LI+G    G++  A    + M  +G EPD  TY+ L  GF    ++  A    Q++
Sbjct: 487 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 546

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           +  G +P+ V+YT LI G+ + G V+  L L E M   G   NV +Y+ +++ + K  R 
Sbjct: 547 VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRF 606

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            EA  +  +M   GL P+++TY+ LI GLC+  +   A +++++M  ++  PN + + ++
Sbjct: 607 SEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 666

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ------ 368
           + GLC++    EA +    +       D V +  +IDG+V LG I  A  L R+      
Sbjct: 667 IYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGC 726

Query: 369 -------------------LIEKRIS---------------------------------- 375
                              L+E++++                                  
Sbjct: 727 KPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCE 786

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P++ T+++L+ G C+ G+  +A +L+  +K  G  P    Y + + A+C+   +   L +
Sbjct: 787 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 846

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
              +E K        Y  +I  LCK  +++EA  L ++M       D+I +  ++    K
Sbjct: 847 FHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLK 906

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
             +L    +LL+ M   N  P   TY IL
Sbjct: 907 EGELDLCMKLLHIMESKNFTPNIQTYVIL 935



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 177/380 (46%), Gaps = 15/380 (3%)

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           ++I+    ++++ +     NE+       + ++   +L+ L + EM+  AR  +  ++ S
Sbjct: 175 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 234

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
                ++ +N +I+   K G + EA  +  Q+ +  +SP + T+ SLI G C+N  +  A
Sbjct: 235 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 294

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             + D +   G +P++VTY+T +N  C EG +   L +L+EM  K I PT  TYT+ I  
Sbjct: 295 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 354

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LC     +EA++L+  M   G  P+  TY  +I    +   L  A  L ++M    L P 
Sbjct: 355 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 414

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
           + TYN LI+ LCV G    A  +   ++ H        Y  IIK  C  GD+ KAM  F 
Sbjct: 415 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 474

Query: 578 QMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           +M++ G   ++  Y                     +M  NG  PD+     ++  F + G
Sbjct: 475 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 534

Query: 623 DLGSVFELAAVMIKSGLLPD 642
            L S       M++ GL P+
Sbjct: 535 KLESASFYFQEMVECGLNPN 554



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 222/498 (44%), Gaps = 33/498 (6%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLY------NLRHTDIMWDLYDDIKVSETPRNV 63
           G +  A+ +  KM ++    ++ TYN+L+       N+ +   + DL   +K +    + 
Sbjct: 464 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL---MKENGCEPDE 520

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T + ++ G  +  +L+ A  + QE       P+ VS   ++  + K G  ++A  L   
Sbjct: 521 WTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLER 580

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M + G +P+  SYN +I+GL       EA +  + M   G+ P+ ITY+ L  G     +
Sbjct: 581 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGR 640

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A+K+   +  +   P++ TY+ LI G CQ G  +E   L + M  +G   + + ++ 
Sbjct: 641 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTS 700

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ-----DKV---HKAI-- 293
           L+      GRID A  LL  M  VG KP+  TYS+L++GL K+     +KV   H+A+  
Sbjct: 701 LIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYS 760

Query: 294 --------------QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
                          L   M      P    +  ++ GLC K    EA      +     
Sbjct: 761 FSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF 820

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             D  +Y  ++  + K   +  A++++  +  K     +  + +LI   CK G+V +A+ 
Sbjct: 821 CPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQA 880

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L D +         + +T  ++   +EG +   + LL  ME+K   P   TY ++ + L 
Sbjct: 881 LFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELS 940

Query: 460 KQWKLQEAVQLLEDMYVI 477
           +  K  E+  L + + V+
Sbjct: 941 RIGKSIESEPLADKLKVL 958



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 215/492 (43%), Gaps = 47/492 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y   G V++A  ++  MKE   +    TYN L                            
Sbjct: 495 YLTKGNVNNAARLLDLMKENGCEPDEWTYNEL---------------------------- 526

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
               + G  +  +L+ A  + QE       P+ VS   ++  + K G  ++A  L   M 
Sbjct: 527 ----VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERME 582

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G +P+  SYN +I+GL       EA +  + M   G+ P+ ITY+ L  G     +  
Sbjct: 583 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQ 642

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A+K+   +  +   P++ TY+ LI G CQ G  +E   L + M  +G   + + ++ L+
Sbjct: 643 FAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLI 702

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
                 GRID A  LL  M  VG KP+  TYS+L++GL K+      + L  ++  +  +
Sbjct: 703 DGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKE-----CLLLEEKVAVQHEA 757

Query: 306 PNSFAHGAILLGLCEKEMITE--ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             SF+     +     E+++   ARM   S I   C   +  Y+ ++ G  + G   EA 
Sbjct: 758 VYSFSPHEKDVNF---EIVSNLLARM---SEI--GCEPTLDTYSTLVSGLCRKGRFYEAE 809

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           QL + + E+   P    + SL+   CKN +V  A ++  +I+  G +     Y   + A 
Sbjct: 810 QLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICAL 869

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ G ++   AL   M  K      + +TV++ GL K+ +L   ++LL  M     TP+ 
Sbjct: 870 CKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNI 929

Query: 484 ITYNTIIRSFCK 495
            TY  + R   +
Sbjct: 930 QTYVILGRELSR 941



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 206/428 (48%), Gaps = 27/428 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRN 62
           +S+ G +  A F   +M E  L  +  +Y +L+         DI   L + ++      N
Sbjct: 530 FSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPN 589

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V + + VI+GL +++R  +A     + A +   P+V++   ++   C+ G  + A  +F 
Sbjct: 590 VESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFH 649

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K    P+ ++Y+ LI+GLC  G  +EA     +M R G+ PD +T++ L  GF +L 
Sbjct: 650 DMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLG 709

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICG------------------------YCQIGN 218
           +I  A+ ++++++  G  P+  TY+VL+ G                        + +  N
Sbjct: 710 RIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVN 769

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
            E    L   M   G +  +  YS L+S +C+ GR  EA  L+ +M+  G  PD   Y  
Sbjct: 770 FEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYS 829

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           L+   CK  +V  A+++++ + +K    +   + A++  LC+   + EA+  FD+++   
Sbjct: 830 LLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKE 889

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              D +++ +++DG +K G +   ++L   +  K  +P+I T+  L     + GK  ++ 
Sbjct: 890 WNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESE 949

Query: 399 RLLDTIKL 406
            L D +K+
Sbjct: 950 PLADKLKV 957



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 128/294 (43%), Gaps = 27/294 (9%)

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN----GKVADARRLLDTIKLHGLEPSA 413
           N+   + +  +L+  R+         L+   C+N     +VAD    L+ I   G   S 
Sbjct: 149 NMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVAD---FLNEISGMGFGFSL 205

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            +  T +    +   ++    L ++M    I P+ +T+  +I  L K+ K++EA  +L  
Sbjct: 206 YSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQ 265

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           ++   ++PD  TY ++I   C+ ++L  AF + ++M     +P S TY+ LI+GLC  G 
Sbjct: 266 IFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGR 325

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           +  A  +L  + E  I  T   YT  I A CA     +A+    +M ++G   +++ YT 
Sbjct: 326 VDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT- 384

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                               ++    + G L     L   M+K GL+P+    N
Sbjct: 385 -------------------ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYN 419


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 179/665 (26%), Positives = 317/665 (47%), Gaps = 23/665 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT--DI-MWDLYDDIKVS 57
           +L  VY R GM+ D++ +   M       S+ T N++L ++  +  D+ +W    ++   
Sbjct: 128 ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR 187

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           +   +V T +I+I+ LC +   + +   +Q+     + P++V+ N ++  YCK G  + A
Sbjct: 188 KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 247

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M   G+  D  +YN+LIH LC +  + +      DM +  + P+ +TY+ L  G
Sbjct: 248 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 307

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    ++  A +++ ++L  G  P+ VT+  LI G+   GN +E LK+  +M ++G   +
Sbjct: 308 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 367

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            ++Y VLL  +CK+   D A G    M+  G+    +TY+ +I GLCK   + +A+ L N
Sbjct: 368 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 427

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM    I P+   + A++ G C+      A+     +       + ++Y+ +I    ++G
Sbjct: 428 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EA+++Y  +I +  +    TFN L+   CK GKVA+A   +  +   G+ P+ V++ 
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 547

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N Y   G   +  ++  EM      PT  TY  ++KGLCK   L+EA + L+ ++ +
Sbjct: 548 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 607

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
               D + YNT++ + CK  +L KA  L  +M   ++ P S TY  LI GLC  G  K  
Sbjct: 608 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG--KTV 665

Query: 538 DCLLVSLQEH---NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR----- 589
             +L + +     N+   KV YT  +      G     + F  QM   G    I      
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725

Query: 590 ----------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                     + T      M +    P+     ++L  + +  D+ + F L   +I +G+
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785

Query: 640 LPDKF 644
           LPDK 
Sbjct: 786 LPDKL 790



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 256/538 (47%), Gaps = 16/538 (2%)

Query: 123 LMLKYGL-HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
           LM  Y L + +   Y+ILI      G ++++LE    MG +G  P   T + +       
Sbjct: 112 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS 171

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +    W  ++++L +   PD+ T+ +LI   C  G+ E+   L + M   G+   ++ Y
Sbjct: 172 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 231

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +L   CK GR   A+ LL  M++ G+  D+ TY++LI  LC+ +++ K   L  +M  
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + I PN   +  ++ G   +  +  A    + ++      + V +N +IDG++  GN  E
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A++++  +  K ++PS V++  L+ G CKN +   AR     +K +G+    +TYT  ++
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+ G +   + LL EM    I P  VTY+ +I G CK  + + A +++  +Y +G++P
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           + I Y+T+I + C+   L++A ++   M L        T+N+L+  LC  G +  A+  +
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------- 591
             +    I    V++  +I  +   G+  KA + F +M + G   +   Y          
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591

Query: 592 -----TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                 + F   + +     D  +   +L A  + G+L     L   M++  +LPD +
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 158/636 (24%), Positives = 283/636 (44%), Gaps = 59/636 (9%)

Query: 61   RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            R  YT   +IDGLC+   L +A++ L E +     P +V+ +A+++ +CK+G  + AK +
Sbjct: 403  RITYTG--MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460

Query: 121  FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             C + + GL P+   Y+ LI+  C  G ++EA+     M   G   D  T+++L      
Sbjct: 461  VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 520

Query: 181  LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV---MLSQGFKLN 237
              +++ A + ++ +   G  P+ V++  LI GY   GN  EGLK   V   M   G    
Sbjct: 521  AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY---GNSGEGLKAFSVFDEMTKVGHHPT 577

Query: 238  VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
               Y  LL  +CK G + EA   L  + AV    D V Y+ L+  +CK   + KA+ L+ 
Sbjct: 578  FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFG 637

Query: 298  EMCSKRISPNSFAHGAILLGLCEKEMITEARMY----------FDSLIMSNCI------- 340
            EM  + I P+S+ + +++ GLC K     A ++            + +M  C        
Sbjct: 638  EMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 697

Query: 341  -------------------QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
                                D+V  N MIDGY ++G I +   L  ++  +   P++ T+
Sbjct: 698  GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTY 757

Query: 382  NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
            N L++G+ K   V+ +  L  +I L+G+ P  +T  + +   CE   ++  L +L+    
Sbjct: 758  NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC 817

Query: 442  KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
            + +     T+ ++I   C   ++  A  L++ M  +G++ D+ T + ++    +    ++
Sbjct: 818  RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 877

Query: 502  AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
            +  +L++M    + P S  Y  LI+GLC  GD+K A  +   +  H I    VA + +++
Sbjct: 878  SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 937

Query: 562  AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPP 606
            A    G   +A      M++     +I  +T                    +M + G   
Sbjct: 938  ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 997

Query: 607  DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            D     V++      GD+   FEL   M   G L +
Sbjct: 998  DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 140/623 (22%), Positives = 265/623 (42%), Gaps = 40/623 (6%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
            + + G    A  ++ ++  + L  +   Y++L+YN      + +   +Y+ + +    R+
Sbjct: 448  FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +T ++++  LC+  ++ +A  F++        P+ VS + +++ Y   G    A  +F 
Sbjct: 508  HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             M K G HP  F+Y  L+ GLC  G + EA +F   +       D + Y+ L        
Sbjct: 568  EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV----------------------- 219
             ++ A  +  +++ +   PD  TYT LI G C+ G                         
Sbjct: 628  NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687

Query: 220  -------------EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
                         + G+  RE M + G   +++  + ++    + G+I++   LL EM  
Sbjct: 688  TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747

Query: 267  VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
                P+L TY+IL+ G  K+  V  +  LY  +    I P+     +++LG+CE  M+  
Sbjct: 748  QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807

Query: 327  ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
                  + I      D   +N++I      G I  A  L + +    IS    T ++++ 
Sbjct: 808  GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867

Query: 387  GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
               +N +  ++R +L  +   G+ P +  Y   +N  C  G+I+    + +EM    I P
Sbjct: 868  VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927

Query: 447  THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             +V  + +++ L K  K  EA  LL  M  + + P   ++ T++   CK  ++ +A +L 
Sbjct: 928  PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELR 987

Query: 507  NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA- 565
              M    L+    +YN+LI GLC  GD+  A  L   ++          Y  +I+   A 
Sbjct: 988  VVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1047

Query: 566  EGDVHKAMTFFCQMVEKGFEISI 588
            E     A      ++ +GF  S+
Sbjct: 1048 ETAFSGADIILKDLLARGFITSM 1070


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 192/690 (27%), Positives = 315/690 (45%), Gaps = 54/690 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRN 62
           Y R G +  AV ++  MK       I TYN+L+        ++    L  +I +     N
Sbjct: 27  YCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPN 86

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +ID  C+   L+DA+    E   K   P VV+   IM+  CK G  E AK +F 
Sbjct: 87  VITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFR 146

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + G+ P+ FSY  LI  L   G++ EA      M   G+  D + Y+ L  G     
Sbjct: 147 EMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAG 206

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
             + A  + Q LL +   P+ VTY+ LI G+C++G+V +G  L + M  +    NVI YS
Sbjct: 207 MANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYS 266

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++    K G ++EA+ ++ +M    + P++  Y  LI G  K D+   A+ L+ EM S+
Sbjct: 267 SIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSR 326

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +  N+F   + +  L     + EA   F  ++    + D V Y  M+DG+ K G   +A
Sbjct: 327 GLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDA 386

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             + +++ EK     +V +N LI G  K GK  ++      ++  GL P + T+ T +NA
Sbjct: 387 FNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINA 445

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP- 481
           YC+EGN+   L LL EM++  + P  +T  ++++ LC   ++++ + LL DM V+G  P 
Sbjct: 446 YCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPT 505

Query: 482 ------------------------DQI----------TYNTIIRSFCKCKDLRKAFQLLN 507
                                   DQ+          TYNT+I +FC+   +R+A  +  
Sbjct: 506 PTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M    +     TYN LI G C++  LK A  +   +    +S     Y  ++    A  
Sbjct: 566 DMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAAR 625

Query: 568 DVHKAMTFFCQMVEKG-------FEISIRDYTK--------SFFCMMLSNGFPPDQEICE 612
            + +A     QM E+G       ++I +  + K          +C M++ GF P      
Sbjct: 626 LIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYN 685

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           V++  F +G  +    EL   M   G+ P+
Sbjct: 686 VLISCFAKGKKMSQAKELMQEMQVRGIPPN 715



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 173/635 (27%), Positives = 288/635 (45%), Gaps = 51/635 (8%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E  R+V   +++IDG C+   +  A+  L+    +   P +V+ N +M+ +CK+G    A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           K L   +    L P+  +Y  LI   C +  +E+AL   ++M    + PD +TY+ +  G
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A  V +++   G  P+  +Y  LI    + GNV E   L+  M+ +G   +
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFD 191

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V+ Y+ L+  + K+G  + A  +   +    L P+ VTYS LI G CK   V+K   L  
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  K I PN   + +I+ G  +K ++ EA      ++  N + +V +Y  +IDGY K  
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
             G A+ L++++  + +  +    +S +    ++G++ +A  L   +   GL P  V YT
Sbjct: 312 QRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT 371

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           + M+ + + G       + QEM  K+ G   V Y V+I GL K  K  E+      M  +
Sbjct: 372 SMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQL 430

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD  T+NT+I ++CK  +L  A +LLN+M  + L+P S T NIL+  LC  G+++  
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 538 DCLL-----------------------------VSLQEHN------ISLTKVAYTTIIKA 562
             LL                             V L  H+      + L    Y T+I  
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIST 550

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------------KSF--FCMMLSNGFPPD 607
            C  G + +A   F  M+ KG    I  Y              K+F     ML+ G  P+
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            E   ++L        +     L   M + GL+P+
Sbjct: 611 VETYNILLGGLSAARLIKEAAGLVNQMKERGLVPN 645



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 233/485 (48%), Gaps = 43/485 (8%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   S ++DG  ++  L +A+  +++   +   P+V     ++  Y K     +A  LF
Sbjct: 261 NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLF 320

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   GL  + F  +  ++ L  +G MEEA E   DM   G+ PD + Y+ +  GF   
Sbjct: 321 KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA 380

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            + S A+ + Q++  K S  D+V Y VLI G  ++G  E        M   G   +   +
Sbjct: 381 GKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATF 439

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++++ CK G +  AL LL EM++ GLKP+ +T +IL++ LC   ++ K + L N+M  
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLV 499

Query: 302 KRISPNSFAHGAIL---------------------LGL--------------CEKEMITE 326
               P    H A+L                     +G+              C   MI  
Sbjct: 500 MGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A + F  ++    + D++ YN +I GY    ++ +A  ++ Q++ + +SP++ T+N L+ 
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G      + +A  L++ +K  GL P+A TY   ++ + + GN++  + L  EM TK   P
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC-------KDL 499
              TY V+I    K  K+ +A +L+++M V G+ P+  TY+ +I  + K        K L
Sbjct: 680 KTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSL 739

Query: 500 RKAFQ 504
           ++++Q
Sbjct: 740 KRSYQ 744



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 218/456 (47%), Gaps = 14/456 (3%)

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           + VLI GYC+ G +   ++L E M ++G   +++ Y+ L++  CK G +  A  L+ E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
            V L+P+++TY+ LI   CK   +  A+ +Y+EM  K + P+   +  I+ GLC+   + 
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA+  F  +     + +   Y  +ID   K GN+ EA  L  +++ + I   +V + +L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G  K G   +A  +   +    L P+ VTY+  ++ +C+ G++ +   LLQEME K I 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  + Y+ ++ G  K+  L EA+ ++  M    + P+   Y T+I  + K      A  L
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
             +M    LE  +   +  ++ L  +G ++ AD L   +    +   +V YT+++     
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379

Query: 566 EGDVHKAMTFFCQMVEK--GFEISIRDY------------TKSFFCMMLSNGFPPDQEIC 611
            G    A     +M EK  GF++   +             ++SF   M   G  PD    
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATF 439

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             M+ A+ + G+LG+  +L   M   GL P+    N
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCN 475



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 234/476 (49%), Gaps = 16/476 (3%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVID 71
           A+ +  +MK   L+ +    +S + NL+ +  M +   L+ D+       +    + ++D
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           G  +  +  DA    QE   K  G  VV+ N +++   KLG  E ++     M + GL P
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAP 434

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D+ ++N +I+  C  G++  AL+  N+M  +G++P++IT +IL +      +I     ++
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             +L+ G  P   T+  ++    +    +  L + + ++  G KL++  Y+ L+S+ C+ 
Sbjct: 495 NDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRL 554

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G I  A  +  +M   G+  D++TY+ LI G C    + KA  ++++M ++ +SPN   +
Sbjct: 555 GMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETY 614

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             +L GL    +I EA    + +     + +   Y+I++ G+ K+GN+ E V+LY ++I 
Sbjct: 615 NILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMIT 674

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY---CEEGN 428
           K   P   T+N LI  F K  K++ A+ L+  +++ G+ P++ TY   +  +    ++  
Sbjct: 675 KGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPE 734

Query: 429 IQRLLA---------LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           + + L          L +EM  K   P   T   +   L K  K  +A ++L  +Y
Sbjct: 735 LNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLY 790



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 104/194 (53%)

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           R L+T +   +  S   +   ++ YC  G I R + LL+ M+T+   P  VTY  ++ G 
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK   L  A +L+ ++ ++ + P+ ITY T+I ++CK + L  A  + ++M + +L P  
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TY  +++GLC +G ++ A  +   ++E  +   + +Y T+I +   EG+V +A     +
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGR 182

Query: 579 MVEKGFEISIRDYT 592
           MV +G    +  YT
Sbjct: 183 MVVRGIGFDVVVYT 196



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 121/300 (40%), Gaps = 55/300 (18%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
            + R GM+  A  V   M    +   I TYN+L++                         
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIH------------------------- 584

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
                  G C  S L+ A     +   +   P+V + N ++         + A GL   M
Sbjct: 585 -------GYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQM 637

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + GL P+A +Y+IL+ G    G+M+E ++   +M   G  P   TY++L   F    ++
Sbjct: 638 KERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKM 697

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           S A +++Q++ ++G  P+  TY +LICG+ ++    E        L++  K +  A    
Sbjct: 698 SQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPE--------LNKSLKRSYQA---- 745

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
                      EA  L  EM   G  P   T + +   L K  K   A ++ N++  K++
Sbjct: 746 -----------EAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKV 794


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 192/690 (27%), Positives = 315/690 (45%), Gaps = 54/690 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRN 62
           Y R G +  AV ++  MK       I TYN+L+        ++    L  +I +     N
Sbjct: 27  YCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPN 86

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +ID  C+   L+DA+    E   K   P VV+   IM+  CK G  E AK +F 
Sbjct: 87  VITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFR 146

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + G+ P+ FSY  LI  L   G++ EA      M   G+  D + Y+ L  G     
Sbjct: 147 EMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAG 206

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
             + A  + Q LL +   P+ VTY+ LI G+C++G+V +G  L + M  +    NVI YS
Sbjct: 207 MANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYS 266

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++    K G ++EA+ ++ +M    + P++  Y  LI G  K D+   A+ L+ EM S+
Sbjct: 267 SIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSR 326

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +  N+F   + +  L     + EA   F  ++    + D V Y  M+DG+ K G   +A
Sbjct: 327 GLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDA 386

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             + +++ EK     +V +N LI G  K GK  ++      ++  GL P + T+ T +NA
Sbjct: 387 FNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINA 445

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP- 481
           YC+EGN+   L LL EM++  + P  +T  ++++ LC   ++++ + LL DM V+G  P 
Sbjct: 446 YCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPT 505

Query: 482 ------------------------DQI----------TYNTIIRSFCKCKDLRKAFQLLN 507
                                   DQ+          TYNT+I +FC+   +R+A  +  
Sbjct: 506 PTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M    +     TYN LI G C++  LK A  +   +    +S     Y  ++    A  
Sbjct: 566 DMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAAR 625

Query: 568 DVHKAMTFFCQMVEKG-------FEISIRDYTK--------SFFCMMLSNGFPPDQEICE 612
            + +A     QM E+G       ++I +  + K          +C M++ GF P      
Sbjct: 626 LIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYN 685

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           V++  F +G  +    EL   M   G+ P+
Sbjct: 686 VLISCFAKGKKMSQAKELMQEMQVRGIPPN 715



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 173/635 (27%), Positives = 288/635 (45%), Gaps = 51/635 (8%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E  R+V   +++IDG C+   +  A+  L+    +   P +V+ N +M+ +CK+G    A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           K L   +    L P+  +Y  LI   C +  +E+AL   ++M    + PD +TY+ +  G
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A  V +++   G  P+  +Y  LI    + GNV E   L+  M+ +G   +
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFD 191

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V+ Y+ L+  + K+G  + A  +   +    L P+ VTYS LI G CK   V+K   L  
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  K I PN   + +I+ G  +K ++ EA      ++  N + +V +Y  +IDGY K  
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
             G A+ L++++  + +  +    +S +    ++G++ +A  L   +   GL P  V YT
Sbjct: 312 QRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT 371

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           + M+ + + G       + QEM  K+ G   V Y V+I GL K  K  E+      M  +
Sbjct: 372 SMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQL 430

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD  T+NT+I ++CK  +L  A +LLN+M  + L+P S T NIL+  LC  G+++  
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 538 DCLL-----------------------------VSLQEHN------ISLTKVAYTTIIKA 562
             LL                             V L  H+      + L    Y T+I  
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLIST 550

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------------KSF--FCMMLSNGFPPD 607
            C  G + +A   F  M+ KG    I  Y              K+F     ML+ G  P+
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            E   ++L        +     L   M + GL+P+
Sbjct: 611 VETYNILLGGLSAARLIKEAAGLVNQMKERGLVPN 645



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 228/466 (48%), Gaps = 1/466 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   S ++DG  ++  L +A+  +++   +   P+V     ++  Y K     +A  LF
Sbjct: 261 NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLF 320

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   GL  + F  +  ++ L  +G MEEA E   DM   G+ PD + Y+ +  GF   
Sbjct: 321 KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA 380

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            + S A+ + Q++  K S  D+V Y VLI G  ++G  E        M   G   +   +
Sbjct: 381 GKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATF 439

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++++ CK G +  AL LL EM++ GLKP+ +T +IL++ LC   ++ K + L N+M  
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLV 499

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               P    H A+L    +           D L+      D+  YN +I  + +LG I  
Sbjct: 500 MGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  +++ ++ K I   I+T+N+LI+G+C +  +  A  +   +   G+ P+  TY   + 
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
                  I+    L+ +M+ + + P   TY +++ G  K   ++E V+L  +M   G  P
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
              TYN +I  F K K + +A +L+ +M +  + P S+TY+ILI G
Sbjct: 680 KTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICG 725



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 218/456 (47%), Gaps = 14/456 (3%)

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           + VLI GYC+ G +   ++L E M ++G   +++ Y+ L++  CK G +  A  L+ E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
            V L+P+++TY+ LI   CK   +  A+ +Y+EM  K + P+   +  I+ GLC+   + 
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA+  F  +     + +   Y  +ID   K GN+ EA  L  +++ + I   +V + +L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G  K G   +A  +   +    L P+ VTY+  ++ +C+ G++ +   LLQEME K I 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  + Y+ ++ G  K+  L EA+ ++  M    + P+   Y T+I  + K      A  L
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
             +M    LE  +   +  ++ L  +G ++ AD L   +    +   +V YT+++     
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379

Query: 566 EGDVHKAMTFFCQMVEK--GFEISIRDY------------TKSFFCMMLSNGFPPDQEIC 611
            G    A     +M EK  GF++   +             ++SF   M   G  PD    
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATF 439

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             M+ A+ + G+LG+  +L   M   GL P+    N
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCN 475



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 233/476 (48%), Gaps = 16/476 (3%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVID 71
           A+ +  +MK   L+ +    +S + NL+ +  M +   L+ D+       +    + ++D
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           G  +  +  DA    QE   K  G  VV+ N +++   KLG  E ++     M + GL P
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAP 434

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D+ ++N +I+  C  G++  AL+  N+M  +G++P++IT +IL +      +I     ++
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             +L+ G  P   T+  ++    +    +  L   + ++  G KL++  Y+ L+S+ C+ 
Sbjct: 495 NDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRL 554

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G I  A  +  +M   G+  D++TY+ LI G C    + KA  ++++M ++ +SPN   +
Sbjct: 555 GMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETY 614

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             +L GL    +I EA    + +     + +   Y+I++ G+ K+GN+ E V+LY ++I 
Sbjct: 615 NILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMIT 674

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY---CEEGN 428
           K   P   T+N LI  F K  K++ A+ L+  +++ G+ P++ TY   +  +    ++  
Sbjct: 675 KGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPE 734

Query: 429 IQRLLA---------LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           + + L          L +EM  K   P   T   +   L K  K  +A ++L  +Y
Sbjct: 735 LNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLY 790



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 104/194 (53%)

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           R L+T +   +  S   +   ++ YC  G I R + LL+ M+T+   P  VTY  ++ G 
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK   L  A +L+ ++ ++ + P+ ITY T+I ++CK + L  A  + ++M + +L P  
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TY  +++GLC +G ++ A  +   ++E  +   + +Y T+I +   EG+V +A     +
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGR 182

Query: 579 MVEKGFEISIRDYT 592
           MV +G    +  YT
Sbjct: 183 MVVRGIGFDVVVYT 196



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 120/299 (40%), Gaps = 55/299 (18%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
            + R GM+  A  V   M    +   I TYN+L++                         
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIH------------------------- 584

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
                  G C  S L+ A     +   +   P+V + N ++         + A GL   M
Sbjct: 585 -------GYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQM 637

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + GL P+A +Y+IL+ G    G+M+E ++   +M   G  P   TY++L   F    ++
Sbjct: 638 KERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKM 697

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           S A +++Q++ ++G  P+  TY +LICG+ ++    E        L++  K +  A    
Sbjct: 698 SQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPE--------LNKSLKRSYQA---- 745

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
                      EA  L  EM   G  P   T + +   L K  K   A ++ N++  K+
Sbjct: 746 -----------EAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKK 793


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 179/665 (26%), Positives = 317/665 (47%), Gaps = 23/665 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT--DI-MWDLYDDIKVS 57
           +L  VY R GM+ D++ +   M       S+ T N++L ++  +  D+ +W    ++   
Sbjct: 168 ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR 227

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           +   +V T +I+I+ LC +   + +   +Q+     + P++V+ N ++  YCK G  + A
Sbjct: 228 KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 287

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M   G+  D  +YN+LIH LC +  + +      DM +  + P+ +TY+ L  G
Sbjct: 288 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 347

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    ++  A +++ ++L  G  P+ VT+  LI G+   GN +E LK+  +M ++G   +
Sbjct: 348 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 407

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            ++Y VLL  +CK+   D A G    M+  G+    +TY+ +I GLCK   + +A+ L N
Sbjct: 408 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 467

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM    I P+   + A++ G C+      A+     +       + ++Y+ +I    ++G
Sbjct: 468 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 527

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EA+++Y  +I +  +    TFN L+   CK GKVA+A   +  +   G+ P+ V++ 
Sbjct: 528 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 587

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N Y   G   +  ++  EM      PT  TY  ++KGLCK   L+EA + L+ ++ +
Sbjct: 588 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 647

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
               D + YNT++ + CK  +L KA  L  +M   ++ P S TY  LI GLC  G  K  
Sbjct: 648 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG--KTV 705

Query: 538 DCLLVSLQEH---NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR----- 589
             +L + +     N+   KV YT  +      G     + F  QM   G    I      
Sbjct: 706 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 765

Query: 590 ----------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                     + T      M +    P+     ++L  + +  D+ + F L   +I +G+
Sbjct: 766 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825

Query: 640 LPDKF 644
           LPDK 
Sbjct: 826 LPDKL 830



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 256/538 (47%), Gaps = 16/538 (2%)

Query: 123 LMLKYGL-HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
           LM  Y L + +   Y+ILI      G ++++LE    MG +G  P   T + +       
Sbjct: 152 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS 211

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +    W  ++++L +   PD+ T+ +LI   C  G+ E+   L + M   G+   ++ Y
Sbjct: 212 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 271

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +L   CK GR   A+ LL  M++ G+  D+ TY++LI  LC+ +++ K   L  +M  
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + I PN   +  ++ G   +  +  A    + ++      + V +N +IDG++  GN  E
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A++++  +  K ++PS V++  L+ G CKN +   AR     +K +G+    +TYT  ++
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+ G +   + LL EM    I P  VTY+ +I G CK  + + A +++  +Y +G++P
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           + I Y+T+I + C+   L++A ++   M L        T+N+L+  LC  G +  A+  +
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------- 591
             +    I    V++  +I  +   G+  KA + F +M + G   +   Y          
Sbjct: 572 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631

Query: 592 -----TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                 + F   + +     D  +   +L A  + G+L     L   M++  +LPD +
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 689



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 158/636 (24%), Positives = 283/636 (44%), Gaps = 59/636 (9%)

Query: 61   RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            R  YT   +IDGLC+   L +A++ L E +     P +V+ +A+++ +CK+G  + AK +
Sbjct: 443  RITYTG--MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 500

Query: 121  FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             C + + GL P+   Y+ LI+  C  G ++EA+     M   G   D  T+++L      
Sbjct: 501  VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 560

Query: 181  LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV---MLSQGFKLN 237
              +++ A + ++ +   G  P+ V++  LI GY   GN  EGLK   V   M   G    
Sbjct: 561  AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY---GNSGEGLKAFSVFDEMTKVGHHPT 617

Query: 238  VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
               Y  LL  +CK G + EA   L  + AV    D V Y+ L+  +CK   + KA+ L+ 
Sbjct: 618  FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFG 677

Query: 298  EMCSKRISPNSFAHGAILLGLCEKEMITEARMY----------FDSLIMSNCI------- 340
            EM  + I P+S+ + +++ GLC K     A ++            + +M  C        
Sbjct: 678  EMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 737

Query: 341  -------------------QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
                                D+V  N MIDGY ++G I +   L  ++  +   P++ T+
Sbjct: 738  GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTY 797

Query: 382  NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
            N L++G+ K   V+ +  L  +I L+G+ P  +T  + +   CE   ++  L +L+    
Sbjct: 798  NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC 857

Query: 442  KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
            + +     T+ ++I   C   ++  A  L++ M  +G++ D+ T + ++    +    ++
Sbjct: 858  RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 917

Query: 502  AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
            +  +L++M    + P S  Y  LI+GLC  GD+K A  +   +  H I    VA + +++
Sbjct: 918  SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 977

Query: 562  AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPP 606
            A    G   +A      M++     +I  +T                    +M + G   
Sbjct: 978  ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 1037

Query: 607  DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            D     V++      GD+   FEL   M   G L +
Sbjct: 1038 DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1073



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 140/623 (22%), Positives = 265/623 (42%), Gaps = 40/623 (6%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
            + + G    A  ++ ++  + L  +   Y++L+YN      + +   +Y+ + +    R+
Sbjct: 488  FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 547

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +T ++++  LC+  ++ +A  F++        P+ VS + +++ Y   G    A  +F 
Sbjct: 548  HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 607

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             M K G HP  F+Y  L+ GLC  G + EA +F   +       D + Y+ L        
Sbjct: 608  EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 667

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV----------------------- 219
             ++ A  +  +++ +   PD  TYT LI G C+ G                         
Sbjct: 668  NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 727

Query: 220  -------------EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
                         + G+  RE M + G   +++  + ++    + G+I++   LL EM  
Sbjct: 728  TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 787

Query: 267  VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
                P+L TY+IL+ G  K+  V  +  LY  +    I P+     +++LG+CE  M+  
Sbjct: 788  QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 847

Query: 327  ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
                  + I      D   +N++I      G I  A  L + +    IS    T ++++ 
Sbjct: 848  GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 907

Query: 387  GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
               +N +  ++R +L  +   G+ P +  Y   +N  C  G+I+    + +EM    I P
Sbjct: 908  VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 967

Query: 447  THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             +V  + +++ L K  K  EA  LL  M  + + P   ++ T++   CK  ++ +A +L 
Sbjct: 968  PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELR 1027

Query: 507  NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA- 565
              M    L+    +YN+LI GLC  GD+  A  L   ++          Y  +I+   A 
Sbjct: 1028 VVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1087

Query: 566  EGDVHKAMTFFCQMVEKGFEISI 588
            E     A      ++ +GF  S+
Sbjct: 1088 ETAFSGADIILKDLLARGFITSM 1110


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/531 (29%), Positives = 275/531 (51%), Gaps = 3/531 (0%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVS 57
           +L +VYS+  MV   + V  KM +  L   ++  N +L  LR  D+M    ++Y  +   
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
                + T + ++D  C+  ++Q  +  L E   +   P+ V+ N +++   K G  E A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           KGL   MLK GL   A++YN LI+G    G + EAL    +M   G  P   TY+    G
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
              L ++S A + +  +L     PD+V+Y  LI GYC++GN+ +   L + + S      
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           ++ Y+ LL  +C+ G ++ A  L  EM   G+ PD+VTY+IL+ G CK   +  A + ++
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  + +  +S+A+   ++G  +    + A    + ++      D+++YN+++DG  KLG
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N+ EA +L ++++   + P  VT+ S+I+   +NG++   R +   +   GL PS VTYT
Sbjct: 529 NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYT 588

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++ +  +G ++R      EM+ K I P  +TY  +I GLCK  ++ +A     +M   
Sbjct: 589 VLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEK 648

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           G+ P++ +Y  +I   C   + ++A  L  QM    ++P S T++ L+  L
Sbjct: 649 GIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/526 (30%), Positives = 251/526 (47%), Gaps = 15/526 (2%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           SV  L+ ++  Y K    E    +F  M+K  L PD  + N ++  L     M +A+E  
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
             MG  G++P  +TY+ L   +    ++     ++ ++  +G  P+ VTY VLI G  + 
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G  E+   L   ML  G K++   Y+ L+      G + EAL L  EM   G  P + TY
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +  I GLCK  ++  A+Q  ++M +  + P+  ++  ++ G C    + +A + FD L  
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                 +V YN ++DG  + G +  A QL  ++I + I+P IVT+  L+ G CK G ++ 
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A+   D +   GLE  +  Y T +    + G+  R  +L +EM  K   P  + Y VV+ 
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 522

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLCK   L+EA +LL+ M   GV PD +TY +II +  +   LRK  ++  +M    L P
Sbjct: 523 GLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTP 582

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           +  TY +LI G    G L+ A      +QE  I    + Y ++I   C    + +A  FF
Sbjct: 583 SVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF 642

Query: 577 CQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPD 607
            +MVEKG   +   YT                S +  ML  G  PD
Sbjct: 643 AEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPD 688



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 221/487 (45%), Gaps = 50/487 (10%)

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +LI  Y +   VE+ L + + M+      +V   + +L  +     + +A+ +   M   
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G+KP +VTY+ L+   CK  KV + + L +EM  +  +PN   +  ++ GL +K    +A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           +     ++ +        YN +I GY   G + EA+ L  +++ K  SP++ T+NS IYG
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G+++DA + L  +  + L P  V+Y T +  YC  GN+ +   L  E+ +  + PT
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC------------- 494
            VTY  ++ GLC+Q +L+ A QL  +M   G+ PD +TY  ++   C             
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468

Query: 495 ----------------------KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
                                 K  D  +AF L  +M      P    YN+++DGLC  G
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +L+ A  LL  +    +    V YT+II AH   G + K    F +M+ KG   S+  YT
Sbjct: 529 NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYT 588

Query: 593 -------------KSF--FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
                        ++F  F  M   G  P+      ++    +   +   +   A M++ 
Sbjct: 589 VLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEK 648

Query: 638 GLLPDKF 644
           G+ P+K+
Sbjct: 649 GIFPNKY 655



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 110/219 (50%)

Query: 41  LRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVS 100
           L  T   + L +++     P ++   ++V+DGLC+   L++A   LQ+       P  V+
Sbjct: 492 LGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVT 551

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
             +I+  + + G     + +F  ML  GL P   +Y +LIHG    G +E A  + ++M 
Sbjct: 552 YTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ 611

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
             G+ P+ ITY+ L  G   + ++  A+    +++ KG  P+  +YT+LI   C +GN +
Sbjct: 612 EKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQ 671

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
           E L L + ML +G + +   +S LL  + K  ++    G
Sbjct: 672 EALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVHG 710


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 179/665 (26%), Positives = 317/665 (47%), Gaps = 23/665 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT--DI-MWDLYDDIKVS 57
           +L  VY R GM+ D++ +   M       S+ T N++L ++  +  D+ +W    ++   
Sbjct: 128 ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR 187

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           +   +V T +I+I+ LC +   + +   +Q+     + P++V+ N ++  YCK G  + A
Sbjct: 188 KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 247

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M   G+  D  +YN+LIH LC +  + +      DM +  + P+ +TY+ L  G
Sbjct: 248 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 307

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    ++  A +++ ++L  G  P+ VT+  LI G+   GN +E LK+  +M ++G   +
Sbjct: 308 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 367

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            ++Y VLL  +CK+   D A G    M+  G+    +TY+ +I GLCK   + +A+ L N
Sbjct: 368 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 427

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM    I P+   + A++ G C+      A+     +       + ++Y+ +I    ++G
Sbjct: 428 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EA+++Y  +I +  +    TFN L+   CK GKVA+A   +  +   G+ P+ V++ 
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 547

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N Y   G   +  ++  EM      PT  TY  ++KGLCK   L+EA + L+ ++ +
Sbjct: 548 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 607

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
               D + YNT++ + CK  +L KA  L  +M   ++ P S TY  LI GLC  G  K  
Sbjct: 608 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG--KTV 665

Query: 538 DCLLVSLQEH---NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR----- 589
             +L + +     N+   KV YT  +      G     + F  QM   G    I      
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725

Query: 590 ----------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                     + T      M +    P+     ++L  + +  D+ + F L   +I +G+
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785

Query: 640 LPDKF 644
           LPDK 
Sbjct: 786 LPDKL 790



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 256/538 (47%), Gaps = 16/538 (2%)

Query: 123 LMLKYGL-HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
           LM  Y L + +   Y+ILI      G ++++LE    MG +G  P   T + +       
Sbjct: 112 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS 171

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +    W  ++++L +   PD+ T+ +LI   C  G+ E+   L + M   G+   ++ Y
Sbjct: 172 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 231

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +L   CK GR   A+ LL  M++ G+  D+ TY++LI  LC+ +++ K   L  +M  
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + I PN   +  ++ G   +  +  A    + ++      + V +N +IDG++  GN  E
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A++++  +  K ++PS V++  L+ G CKN +   AR     +K +G+    +TYT  ++
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+ G +   + LL EM    I P  VTY+ +I G CK  + + A +++  +Y +G++P
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           + I Y+T+I + C+   L++A ++   M L        T+N+L+  LC  G +  A+  +
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------- 591
             +    I    V++  +I  +   G+  KA + F +M + G   +   Y          
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591

Query: 592 -----TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                 + F   + +     D  +   +L A  + G+L     L   M++  +LPD +
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 158/636 (24%), Positives = 283/636 (44%), Gaps = 59/636 (9%)

Query: 61   RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            R  YT   +IDGLC+   L +A++ L E +     P +V+ +A+++ +CK+G  + AK +
Sbjct: 403  RITYTG--MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460

Query: 121  FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             C + + GL P+   Y+ LI+  C  G ++EA+     M   G   D  T+++L      
Sbjct: 461  VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 520

Query: 181  LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV---MLSQGFKLN 237
              +++ A + ++ +   G  P+ V++  LI GY   GN  EGLK   V   M   G    
Sbjct: 521  AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY---GNSGEGLKAFSVFDEMTKVGHHPT 577

Query: 238  VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
               Y  LL  +CK G + EA   L  + AV    D V Y+ L+  +CK   + KA+ L+ 
Sbjct: 578  FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFG 637

Query: 298  EMCSKRISPNSFAHGAILLGLCEKEMITEARMY----------FDSLIMSNCI------- 340
            EM  + I P+S+ + +++ GLC K     A ++            + +M  C        
Sbjct: 638  EMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 697

Query: 341  -------------------QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
                                D+V  N MIDGY ++G I +   L  ++  +   P++ T+
Sbjct: 698  GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTY 757

Query: 382  NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
            N L++G+ K   V+ +  L  +I L+G+ P  +T  + +   CE   ++  L +L+    
Sbjct: 758  NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC 817

Query: 442  KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
            + +     T+ ++I   C   ++  A  L++ M  +G++ D+ T + ++    +    ++
Sbjct: 818  RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 877

Query: 502  AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
            +  +L++M    + P S  Y  LI+GLC  GD+K A  +   +  H I    VA + +++
Sbjct: 878  SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 937

Query: 562  AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPP 606
            A    G   +A      M++     +I  +T                    +M + G   
Sbjct: 938  ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 997

Query: 607  DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            D     V++      GD+   FEL   M   G L +
Sbjct: 998  DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/623 (22%), Positives = 265/623 (42%), Gaps = 40/623 (6%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
            + + G    A  ++ ++  + L  +   Y++L+YN      + +   +Y+ + +    R+
Sbjct: 448  FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +T ++++  LC+  ++ +A  F++        P+ VS + +++ Y   G    A  +F 
Sbjct: 508  HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             M K G HP  F+Y  L+ GLC  G + EA +F   +       D + Y+ L        
Sbjct: 568  EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV----------------------- 219
             ++ A  +  +++ +   PD  TYT LI G C+ G                         
Sbjct: 628  NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687

Query: 220  -------------EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
                         + G+  RE M + G   +++  + ++    + G+I++   LL EM  
Sbjct: 688  TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747

Query: 267  VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
                P+L TY+IL+ G  K+  V  +  LY  +    I P+     +++LG+CE  M+  
Sbjct: 748  QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807

Query: 327  ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
                  + I      D   +N++I      G I  A  L + +    IS    T ++++ 
Sbjct: 808  GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867

Query: 387  GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
               +N +  ++R +L  +   G+ P +  Y   +N  C  G+I+    + +EM    I P
Sbjct: 868  VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927

Query: 447  THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             +V  + +++ L K  K  EA  LL  M  + + P   ++ T++   CK  ++ +A +L 
Sbjct: 928  PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELR 987

Query: 507  NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA- 565
              M    L+    +YN+LI GLC  GD+  A  L   ++          Y  +I+   A 
Sbjct: 988  VVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1047

Query: 566  EGDVHKAMTFFCQMVEKGFEISI 588
            E     A      ++ +GF  S+
Sbjct: 1048 ETAFSGADIILKDLLARGFITSM 1070


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 182/679 (26%), Positives = 315/679 (46%), Gaps = 53/679 (7%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVID 71
           A+ V+ +M    L + +  YN+L+    ++   D  W++ + +K      +V T++ +I 
Sbjct: 208 ALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIG 267

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
             C+  R+++A    +        P VV+L+A++   C+ G    A  LF  M K G+ P
Sbjct: 268 EYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAP 327

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           +  +Y   I  L     + E+L    +M   GV  D + Y+ +        +I  A  V+
Sbjct: 328 NHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVL 387

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           +  L     P+ VTYTVL+  +C+ GN++   ++   M  +    NV+ +S +L+ + K 
Sbjct: 388 RHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKR 447

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G I +A G + +M+  G+ P++VTY  LI G  K      A+ +Y +M  + +  N+F  
Sbjct: 448 GCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIV 507

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
            +++ GL +   I EA   F  +     + D V Y  ++DG  K GN+  A+++ ++L+E
Sbjct: 508 DSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELME 567

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           + +SP  V +N  I   C+ GK ++A+  L  ++  GLEP   TY T ++A C EGN  +
Sbjct: 568 RNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSK 627

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT------ 485
            L LL EM+  +I P  +TYT ++ GL +   +++A  LL +M   G TP  +T      
Sbjct: 628 ALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQ 687

Query: 486 -----------------------------YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
                                        YNT++   C     RKA  +L++M    + P
Sbjct: 688 ACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAP 747

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            + T+N LI G C +  L NA      +    +S     + T++    + G + +A T  
Sbjct: 748 DTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVI 807

Query: 577 CQMVEKGFE-------ISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQG 621
           C+M + G E       I +  Y K          +C M+S GF P       ++  F + 
Sbjct: 808 CEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKA 867

Query: 622 GDLGSVFELAAVMIKSGLL 640
           G +    EL + M + G+L
Sbjct: 868 GMMNQAKELFSEMKRRGVL 886



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 159/599 (26%), Positives = 275/599 (45%), Gaps = 19/599 (3%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I + GL +Q   + A   L E   +      V+++  +    + G    A  L   ML 
Sbjct: 121 NIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAAL-AEMLV 179

Query: 127 YGLHPDAFS---YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
            G   D      +N LI G C    M  AL     M   G+  D + Y+ L  GF     
Sbjct: 180 RGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGD 239

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              AW+V +++   G +P +VT+T LI  YC++  +EE   L E M+  G   +V+  S 
Sbjct: 240 ADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSA 299

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +C+ GR  EA  L  EM+ +G+ P+ VTY   I  L K  +V++++ L  EM S+ 
Sbjct: 300 LVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRG 359

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++ +   +  ++  L ++  I EA+      +  N   + V Y +++D + + GNI  A 
Sbjct: 360 VAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAE 419

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           Q+  Q+ EK +SP++VTF+S++ G  K G +A A   +  +K  G+ P+ VTY T ++ +
Sbjct: 420 QMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGF 479

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            +    +  L + ++M  + +   +     ++ GL K   ++EA  L +DM   G+  D 
Sbjct: 480 FKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDH 539

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           + Y T++    K  ++  A ++  ++   NL P +  YN+ I+ LC  G    A   L  
Sbjct: 540 VNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKE 599

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT----------- 592
           ++   +   +  Y T+I A C EG+  KA+    +M     + ++  YT           
Sbjct: 600 MRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGV 659

Query: 593 ----KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               K     M S GF P       +L A         + E+  +M+ +GL  D  + N
Sbjct: 660 VEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYN 718



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 159/589 (26%), Positives = 270/589 (45%), Gaps = 15/589 (2%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +IDG C+   +  A+  ++    +     VV  N +++ +   G A+ A  +   M   G
Sbjct: 195 LIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADG 254

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + P   ++  LI   C    +EEA      M R GV PD +T S L  G     + S A+
Sbjct: 255 VEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAY 314

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            + +++   G  P+ VTY   I    ++  V E L L   M+S+G  ++++ Y+ ++  +
Sbjct: 315 ALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRL 374

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
            K G+I+EA  +L    +  + P+ VTY++L+   C+   +  A Q+  +M  K +SPN 
Sbjct: 375 GKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNV 434

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
               +IL GL ++  I +A  Y   +  S    +VV Y  +IDG+ K      A+ +YR 
Sbjct: 435 VTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRD 494

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           ++ + +  +    +SL+ G  KNG + +A  L   +   GL    V Y T M+   + GN
Sbjct: 495 MLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGN 554

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +   L + QE+  + + P  V Y V I  LC+  K  EA   L++M   G+ PDQ TYNT
Sbjct: 555 MPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNT 614

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I + C+  +  KA +LLN+M   +++P   TY  L+ GL   G ++ A  LL  +    
Sbjct: 615 MISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAG 674

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM---------- 598
            + T + Y  +++A       +  +     M+  G    I  Y      +          
Sbjct: 675 FTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKAT 734

Query: 599 -----MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                ML  G  PD      +++   +   L + F   A M+  GL P+
Sbjct: 735 IVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPN 783



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 153/578 (26%), Positives = 268/578 (46%), Gaps = 28/578 (4%)

Query: 90  AGKEFGP---SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP----DAFSYNILIHG 142
           A   F P     ++LN+I+  YC L     A  L  L    G  P    D  SYNI + G
Sbjct: 69  AASRFRPVPGDPLTLNSIILSYCSLHALRPA--LSLLRSSSGPQPQVAADTVSYNIFLAG 126

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           L   G    A    ++M + GV  D +T S    G    + + G    + ++L++G   D
Sbjct: 127 LSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSR-TGLVGEAAALAEMLVRGRGID 185

Query: 203 ---IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
              +V +  LI GYC++ ++   L + E M +QG  L+V+ Y+ L++    SG  D A  
Sbjct: 186 GLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWE 245

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           +   M+A G++P +VT++ LI   CK  ++ +A  LY  M    + P+     A++ GLC
Sbjct: 246 VAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLC 305

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
                +EA   F  +       + V Y   ID   K+  + E++ L  +++ + ++  +V
Sbjct: 306 RDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLV 365

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
            + +++    K GK+ +A+ +L       + P+ VTYT  ++A+C  GNI     +L +M
Sbjct: 366 MYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQM 425

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
           E K++ P  VT++ ++ GL K+  + +A   +  M   G+ P+ +TY T+I  F KC+  
Sbjct: 426 EEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQ 485

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
             A  +   M    +E  +   + L++GL  NG+++ A+ L   + E  + L  V Y T+
Sbjct: 486 EAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATL 545

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGF 604
           +      G++  A+    +++E+        Y                KSF   M + G 
Sbjct: 546 MDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGL 605

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            PDQ     M+ A  + G+     +L   M  S + P+
Sbjct: 606 EPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPN 643



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 246/507 (48%), Gaps = 2/507 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T S +++GL ++  +  A  ++++       P+VV+   ++  + K    E A  ++
Sbjct: 433 NVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVY 492

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  G+  + F  + L++GL   G++EEA     DMG  G+  D + Y+ L  G    
Sbjct: 493 RDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKT 552

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A KV Q+L+ +   PD V Y V I   C++G   E     + M + G + +   Y
Sbjct: 553 GNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATY 612

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++S+ C+ G   +AL LL EM+   +KP+L+TY+ L+ GL +   V KA  L NEM S
Sbjct: 613 NTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMAS 672

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIG 360
              +P    +  +L   C         +    L+M   +  D+ +YN ++      G   
Sbjct: 673 AGFTPTPLTYRRVLQA-CSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTR 731

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  +  +++ + I+P  +TFN+LI G CK+  + +A      +   GL P+  T+ T +
Sbjct: 732 KATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLL 791

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
                 G I     ++ EM+   + P ++TY +++ G  K+    EA++L  +M   G  
Sbjct: 792 GGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFI 851

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P   TYN++I  F K   + +A +L ++M    +  TS+TY+IL++G     +      L
Sbjct: 852 PKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRIL 911

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEG 567
           L  ++E     +K   +++ +A    G
Sbjct: 912 LKDMKELGFKPSKGTISSMSRAFSKPG 938



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 235/507 (46%), Gaps = 5/507 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVY 64
           + G +  A   + KMK+  +  ++ TY +L+   +  +  +   D+Y D+       N +
Sbjct: 446 KRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNF 505

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
               +++GL +   +++A    ++   +      V+   +M    K G    A  +   +
Sbjct: 506 IVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQEL 565

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++  L PDA  YN+ I+ LC  G   EA  F  +M   G+EPD  TY+ +          
Sbjct: 566 MERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNT 625

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           S A K++ ++      P+++TYT L+ G  + G VE+   L   M S GF    + Y  +
Sbjct: 626 SKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRV 685

Query: 245 LSSMCKSGRIDEALGLLYE-MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L + C   R    +  ++E M   GL  D+  Y+ L+  LC      KA  + +EM  + 
Sbjct: 686 LQA-CSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRG 744

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I+P++    A++LG C+   +  A   +  ++      ++  +N ++ G    G IGEA 
Sbjct: 745 IAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEAD 804

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +  ++ +  + P+ +T++ L+ G+ K     +A RL   +   G  P A TY + ++ +
Sbjct: 805 TVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDF 864

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            + G + +   L  EM+ + +  T  TY +++ G  K     E   LL+DM  +G  P +
Sbjct: 865 AKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSK 924

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMW 510
            T +++ R+F K     +A +LL  ++
Sbjct: 925 GTISSMSRAFSKPGMTWEARRLLKTLF 951


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 154/506 (30%), Positives = 254/506 (50%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           ++ DAI   +        P+ +  N + S   +    ++  G    M   G+  D ++  
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           I+I+  C    +  A        + G EPD IT+S L  GF L  ++S A  ++ +++  
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
              PD+VT + LI G C  G V E L L + M+  GF+ + + Y  +L+ +CKSG    A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L L  +ME   +K  +V YSI+I  LCK      A+ L+NEM  K I  +   + +++ G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC      +       +I  N I DVV ++ +ID +VK G + EA +LY ++I + I+P 
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            +T+NSLI GFCK   + +A ++ D +   G EP  VTY+  +N+YC+   +   + L +
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           E+ +K + P  +TY  ++ G C+  KL  A +L ++M   GV P  +TY  ++   C   
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
           +L KA ++  +M    +      YNI+I G+C    + +A  L  SL +  +    V Y 
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +I   C +G + +A   F +M E G
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDG 555



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 151/486 (31%), Positives = 242/486 (49%), Gaps = 12/486 (2%)

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K G  PD  +++ L++G C+ G + EA+   + M      PD +T S L  G  L  ++S
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  +I +++  G  PD VTY  ++   C+ GN    L L   M  +  K +V+ YS+++
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
            S+CK G  D+AL L  EME  G+K D+VTYS LI GLC   K     ++  EM  + I 
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+     A++    ++  + EA+  ++ +I      D + YN +IDG+ K   + EA Q+
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           +  ++ K   P IVT++ LI  +CK  +V D  RL   I   GL P+ +TY T +  +C+
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G +     L QEM ++ + P+ VTY +++ GLC   +L +A+++ E M    +T     
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YN II   C    +  A+ L   +    ++P   TYN++I GLC  G L  AD L   ++
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE------------ISIRDYTK 593
           E   +     Y  +I+AH     +  ++    +M   GF             +S R   K
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDK 612

Query: 594 SFFCMM 599
           SF  M+
Sbjct: 613 SFLDML 618



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 143/517 (27%), Positives = 269/517 (52%), Gaps = 3/517 (0%)

Query: 12  VHDAVFVIAKM---KELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           V+DA+ +   M   + L   +      S +   +  D++      ++++    ++YT +I
Sbjct: 51  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+  C++ +L  A   L       + P  ++ + +++ +C  G    A  L   M++  
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  + + LI+GLC+ G + EAL   + M  +G +PD +TY  +          + A 
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            + +K+  +     +V Y+++I   C+ G+ ++ L L   M  +G K +V+ YS L+  +
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C  G+ D+   +L EM    + PD+VT+S LI    K+ K+ +A +LYNEM ++ I+P++
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             + +++ G C++  + EA   FD ++   C  D+V Y+I+I+ Y K   + + ++L+R+
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  K + P+ +T+N+L+ GFC++GK+  A+ L   +   G+ PS VTY   ++  C+ G 
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           + + L + ++M+   +      Y ++I G+C   K+ +A  L   +   GV PD +TYN 
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           +I   CK   L +A  L  +M      P   TYNILI
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 232/437 (53%), Gaps = 1/437 (0%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +++ + P ++ T S +I+GLC + R+ +A++ +       F P  V+   +++R CK G 
Sbjct: 167 VEMKQRP-DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
           + +A  LF  M +  +      Y+I+I  LC  GS ++AL   N+M   G++ D +TYS 
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L  G     +     K++++++ +   PD+VT++ LI  + + G + E  +L   M+++G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              + I Y+ L+   CK   + EA  +   M + G +PD+VTYSILI   CK  +V   +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           +L+ E+ SK + PN+  +  ++LG C+   +  A+  F  ++       VV Y I++DG 
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
              G + +A++++ ++ + R++  I  +N +I+G C   KV DA  L  ++   G++P  
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTY   +   C++G++     L ++M+     P   TY ++I+       L  +V+L+E+
Sbjct: 526 VTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEE 585

Query: 474 MYVIGVTPDQITYNTII 490
           M V G + D  T   +I
Sbjct: 586 MKVCGFSADSSTIKMVI 602



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 209/409 (51%), Gaps = 3/409 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G V +A+ +I +M E   +    TY  +L  L    ++ +  DL+  ++      +V   
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           SIVID LC+     DA+    E   K     VV+ ++++   C  G  +    +   M+ 
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + PD  +++ LI      G + EA E  N+M   G+ PD ITY+ L  GF   + +  
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A ++   ++ KG +PDIVTY++LI  YC+   V++G++L   + S+G   N I Y+ L+ 
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             C+SG+++ A  L  EM + G+ P +VTY IL+ GLC   +++KA++++ +M   R++ 
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
               +  I+ G+C    + +A   F SL       DVV YN+MI G  K G++ EA  L+
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           R++ E   +P   T+N LI        +  +  L++ +K+ G    + T
Sbjct: 549 RKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 597



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 174/362 (48%), Gaps = 32/362 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + G   DA+ +  +M+   +K  + TY+SL                              
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSL------------------------------ 286

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
             I GLC   +  D    L+E  G+   P VV+ +A++  + K G    AK L+  M+  
Sbjct: 287 --IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+ PD  +YN LI G C    + EA +  + M   G EPD +TYSIL   +    ++   
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++ +++  KG  P+ +TY  L+ G+CQ G +    +L + M+S+G   +V+ Y +LL  
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C +G +++AL +  +M+   +   +  Y+I+I G+C   KV  A  L+  +  K + P+
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  ++ GLC+K  ++EA M F  +    C  D   YNI+I  ++    +  +V+L  
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584

Query: 368 QL 369
           ++
Sbjct: 585 EM 586



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 134/282 (47%), Gaps = 9/282 (3%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN------LRHTDIMWDLYDDIKVSE 58
           V+ + G + +A  +  +M    +     TYNSL+        L   + M+DL   +    
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM--VSKGC 381

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
            P ++ T SI+I+  C+  R+ D +   +E + K   P+ ++ N ++  +C+ G    AK
Sbjct: 382 EP-DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            LF  M+  G+ P   +Y IL+ GLC  G + +ALE    M +  +      Y+I+  G 
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
              S++  AW +   L  KG  PD+VTY V+I G C+ G++ E   L   M   G   + 
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
             Y++L+ +      +  ++ L+ EM+  G   D  T  ++I
Sbjct: 561 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 114/253 (45%), Gaps = 5/253 (1%)

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           IQ ++  N     + ++   G ++  Y  + E ++S      N ++     + KV DA  
Sbjct: 2   IQRLIPLNRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIV-----DIKVNDAID 56

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L +++      P+ + +    +A         +L   + ME   I     T T++I   C
Sbjct: 57  LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           ++ KL  A  +L   + +G  PD IT++T++  FC    + +A  L+++M      P   
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           T + LI+GLC+ G +  A  L+  + E+     +V Y  ++   C  G+   A+  F +M
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236

Query: 580 VEKGFEISIRDYT 592
            E+  + S+  Y+
Sbjct: 237 EERNIKASVVQYS 249


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 151/534 (28%), Positives = 283/534 (52%), Gaps = 7/534 (1%)

Query: 7   SRTGM----VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSET 59
           SR G+    + DAV +  +M +     SI  ++ LL     +   D++  L + ++    
Sbjct: 53  SRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGM 112

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N YT SI+I+  C++S+L  A+  L +     + P++V+L+++++ YC       A  
Sbjct: 113 PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA 172

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M   G  P+  ++N LIHGL +     EA+   + M   G +PD +TY ++  G  
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLC 232

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
                  A+ ++ K+     +P ++ YT +I G C+  ++++ L L + M ++G + NV+
Sbjct: 233 KRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVV 292

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            YS L+S +C  GR  +A  LL +M    + PD+ T+S LI    K+ K+ +A +LY+EM
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             + I P+   + +++ G C  + + EA+  F+ ++  +C  DVV Y+ +I G+ K   +
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRV 412

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            E ++L+R++ ++ +  + VT+ +LI G  + G    A+ +   +   G+ P+ +TY T 
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C+ G +++ + + + ++   + PT  TY ++I+G+CK  K+++   L  ++ + GV
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
            PD + YNT+I  FC+     +A  L  +M      P S  YN LI     +GD
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 272/520 (52%), Gaps = 1/520 (0%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           Y   +  +GL  + +L DA+    E       PS++  + ++S   K+   +V   L   
Sbjct: 48  YREKLSRNGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQ 106

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G+  + ++Y+ILI+  C    +  AL     M + G EP+ +T S L  G+    +
Sbjct: 107 MQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           IS A  ++ ++ + G  P+ VT+  LI G        E + L + M+++G + +++ Y V
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGV 226

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +++ +CK G  D A  LL +ME   L+P ++ Y+ +I GLCK   +  A+ L+ EM +K 
Sbjct: 227 VVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKG 286

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I PN   + +++  LC     ++A      +I      DV  ++ +ID +VK G + EA 
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +LY +++++ I PSIVT++SLI GFC + ++ +A+++ + +      P  V+Y+T +  +
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGF 406

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+   +   + L +EM  + +    VTYT +I+GL +      A ++ ++M   GV P+ 
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TYNT++   CK   L KA  +   +    +EPT  TYNI+I+G+C  G +++   L  +
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L    +    VAY T+I   C +G   +A   F +M E G
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 256/541 (47%), Gaps = 15/541 (2%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  M+K    P    ++ L+  +      +  +     M   G+  +  TYSIL  
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILIN 124

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F   SQ+  A  V+ K++  G +P+IVT + L+ GYC    + E + L + M   G++ 
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N + ++ L+  +    +  EA+ L+  M A G +PDLVTY +++ GLCK+     A  L 
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILL 244

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           N+M   ++ P    +  I+ GLC+ + + +A   F  +       +VV Y+ +I      
Sbjct: 245 NKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   +A +L   +IE++I+P + TF++LI  F K GK+ +A +L D +    ++PS VTY
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           ++ +N +C    +     + + M +K   P  V+Y+ +IKG CK  ++ E ++L  +M  
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQ 424

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+  + +TY T+I+   +  D   A ++  +M    + P   TYN L+DGLC NG L+ 
Sbjct: 425 RGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--S 594
           A  +   LQ   +  T   Y  +I+  C  G V      FC +  KG +  +  Y    S
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544

Query: 595 FFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            FC              M  +G  P+      ++ A  + GD  +  EL   M   G   
Sbjct: 545 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAG 604

Query: 642 D 642
           D
Sbjct: 605 D 605



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 241/483 (49%), Gaps = 3/483 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           + R   +  A+ V+ KM +L  + +I T +SLL    H+  + +   L D + V+    N
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +I GL   ++  +A+  +     K   P +V+   +++  CK G  ++A  L  
Sbjct: 186 TVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLN 245

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M +  L P    Y  +I GLC    M++AL    +M   G+ P+ +TYS L        
Sbjct: 246 KMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           + S A +++  ++ +  +PD+ T++ LI  + + G + E  KL + M+ +    +++ YS
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++  C   R+DEA  +   M +    PD+V+YS LI+G CK  +V + ++L+ EM  +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQR 425

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +  N+  +  ++ GL +      A+  F  ++      +++ YN ++DG  K G + +A
Sbjct: 426 GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + ++  L   ++ P+I T+N +I G CK GKV D   L   + L G++P  V Y T ++ 
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +C +G+ +   AL +EM+     P    Y  +I+   +    + + +L+++M   G   D
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605

Query: 483 QIT 485
             T
Sbjct: 606 AST 608



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 214/436 (49%), Gaps = 16/436 (3%)

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           E++ S+ F  ++I +S LLS++ K  + D  + L  +M+ +G+  +  TYSILI   C++
Sbjct: 71  EMVKSRPFP-SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRR 129

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            ++  A+ +  +M      PN     ++L G C  + I+EA    D + ++    + V +
Sbjct: 130 SQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF 189

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N +I G        EAV L  +++ K   P +VT+  ++ G CK G    A  LL+ ++ 
Sbjct: 190 NTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQ 249

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
             LEP  + YTT ++  C+  ++   L L +EMETK I P  VTY+ +I  LC   +  +
Sbjct: 250 GKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A +LL DM    + PD  T++ +I +F K   L +A +L ++M   +++P+  TY+ LI+
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG--- 583
           G C++  L  A  +   +   +     V+Y+T+IK  C    V + M  F +M ++G   
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVG 429

Query: 584 ------------FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
                       F+    D  +  F  M+S+G PP+      +L    + G L     + 
Sbjct: 430 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489

Query: 632 AVMIKSGLLPDKFLIN 647
             + +S + P  +  N
Sbjct: 490 EYLQRSKMEPTIYTYN 505



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 137/298 (45%), Gaps = 15/298 (5%)

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + +AV L+ ++++ R  PSI+ F+ L+    K  K      L + ++  G+  +  TY+ 
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +N +C    +   LA+L +M      P  VT + ++ G C   ++ EAV L++ M+V G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
             P+ +T+NT+I          +A  L+++M     +P   TY ++++GLC  GD   A 
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            LL  +++  +    + YTTII   C    +  A+  F +M  KG   ++  Y+    C+
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 599 ---------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                          M+     PD      ++ AF + G L    +L   M+K  + P
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 30  SIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           +I TYN+LL  L     +     +++ ++ S+    +YT +I+I+G+C+  +++D     
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
              + K   P VV+ N ++S +C+ G  E A  LF  M + G  P++  YN LI      
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           G  E + E   +M   G   DA T  ++    H
Sbjct: 585 GDREASAELIKEMRSCGFAGDASTIGLVTNMLH 617


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 192/690 (27%), Positives = 315/690 (45%), Gaps = 54/690 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRN 62
           Y R G +  AV ++  MK       I TYN+L+        ++    L  +I +     N
Sbjct: 27  YCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPN 86

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +ID  C+   L+DA+    E   K   P VV+   IM+  CK G  E AK +F 
Sbjct: 87  VITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFR 146

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + G+ P+ FSY  LI  L   G++ EA      M   G+  D + Y+ L  G     
Sbjct: 147 EMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAG 206

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
             + A  + Q LL +   P+ VTY+ LI G+C++G+V +G  L + M  +    NVI YS
Sbjct: 207 MANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYS 266

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++    K G ++EA+ ++ +M    + P++  Y  LI G  K D+   A+ L+ EM S+
Sbjct: 267 SIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSR 326

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +  N+F   + +  L     + EA   F  ++    + D V Y  M+DG+ K G   +A
Sbjct: 327 GLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDA 386

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             + +++ EK     +V +N LI G  K GK  ++      ++  GL P + T+ T +NA
Sbjct: 387 FNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINA 445

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP- 481
           YC+EGN+   L LL EM++  + P  +T  ++++ LC   ++++ + LL DM V+G  P 
Sbjct: 446 YCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPT 505

Query: 482 ------------------------DQI----------TYNTIIRSFCKCKDLRKAFQLLN 507
                                   DQ+          TYNT+I +FC+   +R+A  +  
Sbjct: 506 PTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M    +     TYN LI G C++  LK A  +   +    +S     Y  ++    A  
Sbjct: 566 DMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAAR 625

Query: 568 DVHKAMTFFCQMVEKG-------FEISIRDYTK--------SFFCMMLSNGFPPDQEICE 612
            + +A     QM E+G       ++I +  + K          +C M++ GF P      
Sbjct: 626 LIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYN 685

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           V++  F +G  +    EL   M   G+ P+
Sbjct: 686 VLISCFAKGKKMSQAKELMQEMQVRGIPPN 715



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 173/635 (27%), Positives = 288/635 (45%), Gaps = 51/635 (8%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E  R+V   +++IDG C+   +  A+  L+    +   P +V+ N +M+ +CK+G    A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           K L   +    L P+  +Y  LI   C +  +E+AL   ++M    + PD +TY+ +  G
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A  V +++   G  P+  +Y  LI    + GNV E   L+  M+ +G   +
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFD 191

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V+ Y+ L+  + K+G  + A  +   +    L P+ VTYS LI G CK   V+K   L  
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  K I PN   + +I+ G  +K ++ EA      ++  N + +V +Y  +IDGY K  
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
             G A+ L++++  + +  +    +S +    ++G++ +A  L   +   GL P  V YT
Sbjct: 312 QRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT 371

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           + M+ + + G       + QEM  K+ G   V Y V+I GL K  K  E+      M  +
Sbjct: 372 SMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQL 430

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD  T+NT+I ++CK  +L  A +LLN+M  + L+P S T NIL+  LC  G+++  
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 538 DCLL-----------------------------VSLQEHN------ISLTKVAYTTIIKA 562
             LL                             V L  H+      + L    Y T+I  
Sbjct: 491 MDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIST 550

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------------KSF--FCMMLSNGFPPD 607
            C  G + +A   F  M+ KG    I  Y              K+F     ML+ G  P+
Sbjct: 551 FCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            E   ++L        +     L   M + GL+P+
Sbjct: 611 VETYNILLGGLSAARLIKEAAGLVNQMKERGLVPN 645



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 233/485 (48%), Gaps = 43/485 (8%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   S ++DG  ++  L +A+  +++   +   P+V     ++  Y K     +A  LF
Sbjct: 261 NVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLF 320

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   GL  + F  +  ++ L  +G MEEA E   DM   G+ PD + Y+ +  GF   
Sbjct: 321 KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKA 380

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            + S A+ + Q++  K S  D+V Y VLI G  ++G  E        M   G   +   +
Sbjct: 381 GKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATF 439

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++++ CK G +  AL LL EM++ GLKP+ +T +IL++ LC   ++ K + L N+M  
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLV 499

Query: 302 KRISPNSFAHGAIL---------------------LGL--------------CEKEMITE 326
               P    H A+L                     +G+              C   MI  
Sbjct: 500 MGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A + F  ++    + D++ YN +I GY    ++ +A  ++ Q++ + +SP++ T+N L+ 
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G      + +A  L++ +K  GL P+A TY   ++ + + GN++  + L  EM TK   P
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC-------KDL 499
              TY V+I    K  K+ +A +L+++M V G+ P+  TY+ +I  + K        K L
Sbjct: 680 KTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSL 739

Query: 500 RKAFQ 504
           ++++Q
Sbjct: 740 KRSYQ 744



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 218/456 (47%), Gaps = 14/456 (3%)

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           + VLI GYC+ G +   ++L E M ++G   +++ Y+ L++  CK G +  A  L+ E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
            V L+P+++TY+ LI   CK   +  A+ +Y+EM  K + P+   +  I+ GLC+   + 
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA+  F  +     + +   Y  +ID   K GN+ EA  L  +++ + I   +V + +L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G  K G   +A  +   +    L P+ VTY+  ++ +C+ G++ +   LLQEME K I 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  + Y+ ++ G  K+  L EA+ ++  M    + P+   Y T+I  + K      A  L
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
             +M    LE  +   +  ++ L  +G ++ AD L   +    +   +V YT+++     
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379

Query: 566 EGDVHKAMTFFCQMVEK--GFEISIRDY------------TKSFFCMMLSNGFPPDQEIC 611
            G    A     +M EK  GF++   +             ++SF   M   G  PD    
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATF 439

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             M+ A+ + G+LG+  +L   M   GL P+    N
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCN 475



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 234/476 (49%), Gaps = 16/476 (3%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVID 71
           A+ +  +MK   L+ +    +S + NL+ +  M +   L+ D+       +    + ++D
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           G  +  +  DA    QE   K  G  VV+ N +++   KLG  E ++     M + GL P
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAP 434

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D+ ++N +I+  C  G++  AL+  N+M  +G++P++IT +IL +      +I     ++
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             +L+ G  P   T+  ++    +    +  L + + ++  G KL++  Y+ L+S+ C+ 
Sbjct: 495 NDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRL 554

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G I  A  +  +M   G+  D++TY+ LI G C    + KA  ++++M ++ +SPN   +
Sbjct: 555 GMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETY 614

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             +L GL    +I EA    + +     + +   Y+I++ G+ K+GN+ E V+LY ++I 
Sbjct: 615 NILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMIT 674

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY---CEEGN 428
           K   P   T+N LI  F K  K++ A+ L+  +++ G+ P++ TY   +  +    ++  
Sbjct: 675 KGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPE 734

Query: 429 IQRLLA---------LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           + + L          L +EM  K   P   T   +   L K  K  +A ++L  +Y
Sbjct: 735 LNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLY 790



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 104/194 (53%)

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           R L+T +   +  S   +   ++ YC  G I R + LL+ M+T+   P  VTY  ++ G 
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK   L  A +L+ ++ ++ + P+ ITY T+I ++CK + L  A  + ++M + +L P  
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TY  +++GLC +G ++ A  +   ++E  +   + +Y T+I +   EG+V +A     +
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGR 182

Query: 579 MVEKGFEISIRDYT 592
           MV +G    +  YT
Sbjct: 183 MVVRGIGFDVVVYT 196



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 120/299 (40%), Gaps = 55/299 (18%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
            + R GM+  A  V   M    +   I TYN+L++                         
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIH------------------------- 584

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
                  G C  S L+ A     +   +   P+V + N ++         + A GL   M
Sbjct: 585 -------GYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQM 637

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + GL P+A +Y+IL+ G    G+M+E ++   +M   G  P   TY++L   F    ++
Sbjct: 638 KERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKM 697

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           S A +++Q++ ++G  P+  TY +LICG+ ++    E        L++  K +  A    
Sbjct: 698 SQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPE--------LNKSLKRSYQA---- 745

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
                      EA  L  EM   G  P   T + +   L K  K   A ++ N++  K+
Sbjct: 746 -----------EAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKK 793


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 164/589 (27%), Positives = 292/589 (49%), Gaps = 3/589 (0%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNV 63
           ++ G   +A  +  ++K       + +Y+ L+ +L      +   ++  +++      N+
Sbjct: 20  AKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNL 79

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T + ++D L +  +  +A+  L E       P V + N ++S   K G    A  LF  
Sbjct: 80  WTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAE 139

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M + G  PD F+YN LI+GL   G  ++A+E   +M RHG  PD +TYS L  G     +
Sbjct: 140 MRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGE 199

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A+K+ Q++  +G  PD +T+T L+    + G V++ L+L + M  +G K  V+ Y+ 
Sbjct: 200 TVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNA 259

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++   K G + EA  LL EM+  G KPD+VTYS LI GL K  ++ +A Q+  +M  + 
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P++  +  ++ GL +  ++ +A   FD +    C  DVV Y+ +I    K   +  A 
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESAC 379

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L+ ++    I P + T+ S+I    K G+V DA RL   ++  GL P  +TY  F+N+ 
Sbjct: 380 VLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSL 439

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
              G  +    + ++M+   + P   TY  ++ GL K  ++ +A  LL+++   G   D 
Sbjct: 440 GRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDS 499

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           + ++  +       ++ +A +LL       L P +++YN LID L   G +  A   L  
Sbjct: 500 LKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLED 559

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           L+E       V+Y+++I A    G +  A     +M ++G ++S R Y+
Sbjct: 560 LKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYS 608



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 166/593 (27%), Positives = 286/593 (48%), Gaps = 15/593 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + +++ L +  + ++A L  +E    ++ P VVS + +++   + G  E A  + 
Sbjct: 8   NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G  P+ ++YN L+  L  AG  +EAL    +M  +G  PD  TY+ L       
Sbjct: 68  AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++S A+ +  ++  +G  PD  TY  LI G  ++G  ++ ++L E M   G   +V+ Y
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S L++ + K G   +A  L  EM+  G KPD +T++ L+  L K  +V  A++L +EM  
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + + P    + A++ G  +   + EA    D +  + C  DVV Y+ +I G +K   + E
Sbjct: 248 RGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDE 307

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A Q+ +++ ++   P  +T+N+LI G  K G + DA RL D +K  G  P  VTY+T + 
Sbjct: 308 ACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLIT 367

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           A  +   ++    L +EME+  I P   TY  +I  L K  ++ +A +L  +M   G++P
Sbjct: 368 ALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSP 427

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D ITYN  + S  +    ++A ++   M    L P  ATY+ L+ GL    ++ +A  LL
Sbjct: 428 DVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLL 487

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------- 591
             L E   +   + +   ++   + G+V +A         KG       Y          
Sbjct: 488 KELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKA 547

Query: 592 ---TKSFFCM--MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
              +++F  +  +   G  PD      ++ A  Q G + + FEL   M K GL
Sbjct: 548 GRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGL 600



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 264/521 (50%), Gaps = 3/521 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVY 64
           + G   +A+ ++A+M++      ++TYN L+  L     +   + L+ +++      + +
Sbjct: 91  KAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTF 150

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I GL +  R Q A+  L+E       P V++ +++++   K G    A  LF  M
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEM 210

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G  PD+ ++  L+  L  AG +++ALE  ++M   GV+P  +TY+ L  GF  +  +
Sbjct: 211 KRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDL 270

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A+ ++ ++   G  PD+VTY+ LI G  +   ++E  ++ + M  +G   + I Y+ L
Sbjct: 271 VEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTL 330

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++ + K+G +++A  L   M++ G  PD+VTYS LI  L K  +V  A  L+ EM S  I
Sbjct: 331 INGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGI 390

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+ F + +I+  L +   + +A   F  +       DV+ YN  ++   + G   EA +
Sbjct: 391 QPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARK 450

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           ++  + E  + P + T+++L+ G  K  +V DA  LL  +   G    ++ +   +    
Sbjct: 451 IFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILT 510

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             GN+     LLQ   +K + P   +Y  +I  L K  ++ EA   LED+   G  PD +
Sbjct: 511 SWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIV 570

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           +Y+++I +  +   +  AF+LL +M    L+ +  +Y+ L+
Sbjct: 571 SYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 221/462 (47%)

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P+  +YN L++ L  AG  EEA     ++      PD ++YS L        +   A +
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           V+ ++  KG  P++ TY  L+    + G  +E L+L   M   G   +V  Y+ L+S++ 
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K+GR+ EA  L  EM   G  PD  TY+ LI GL K  +  KA++L  EM      P+  
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            + +++ GL +     +A   F  +       D + +  ++D   K G + +A++L  ++
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            E+ + P +VT+N+LI GF K G + +A  LLD +K +G +P  VTY+  +    +   +
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
                +L++ME +   P  +TY  +I GL K   L +A +L + M   G  PD +TY+T+
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTL 365

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I +  K   +  A  L  +M    ++P   TY  +I  L   G + +AD L   ++   +
Sbjct: 366 ITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGL 425

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           S   + Y   + +    G   +A   F  M E G    +  Y
Sbjct: 426 SPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATY 467



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 226/477 (47%), Gaps = 20/477 (4%)

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           P+ +TY+ L        Q   A  + ++L      PD+V+Y+ LI    + G  E  L++
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
              M ++G K N+  Y+ L+  + K+G+ DEAL LL EM   G  PD+ TY+ LI  L K
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
             ++ +A  L+ EM  +   P++F + +++ GL +     +A    + +    C  DV+ 
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y+ +I G  K G   +A +L++++  +   P  +TF +L+    K G+V DA  LLD +K
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             G++P  VTY   +  + + G++     LL EM+     P  VTY+ +I GL K  +L 
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA Q+L+ M   G  PD ITYNT+I    K   L  A +L ++M      P   TY+ LI
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
             L     +++A  L   ++   I      Y +II      G V  A   F +M  KG  
Sbjct: 367 TALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLS 426

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             +  Y          N F          L +  +GG      ++   M +SGLLPD
Sbjct: 427 PDVITY----------NAF----------LNSLGRGGRFKEARKIFEDMKESGLLPD 463



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 235/464 (50%), Gaps = 4/464 (0%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVSE 58
           L +   + G    A+ ++ +M+       + TY+SL+  L     T   + L+ ++K   
Sbjct: 155 LIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRG 214

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +  T + ++D L +  R+ DA+  L E   +   P VV+ NA+++ + K+G    A 
Sbjct: 215 RKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAY 274

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M + G  PD  +Y+ LI GL  A  ++EA +    M + G  PD ITY+ L  G 
Sbjct: 275 NLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGL 334

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                ++ A ++  ++  KG +PD+VTY+ LI    +   VE    L E M S G + ++
Sbjct: 335 GKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDL 394

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y  +++ + K+G++D+A  L  EM   GL PD++TY+  +  L +  +  +A +++ +
Sbjct: 395 FTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFED 454

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M    + P+   + A+LLGL + + + +A      LI   C  D + ++  ++     GN
Sbjct: 455 MKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGN 514

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EA +L +    K + P   ++N+LI    K G+V++A   L+ +K  G +P  V+Y++
Sbjct: 515 VDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSS 574

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            ++A  + G I     LL+EM  + +  +  +Y+ +++ L + W
Sbjct: 575 LISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL-QDW 617



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 198/408 (48%), Gaps = 20/408 (4%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NV+ Y+ LL+++ K+G+ +EA  L  E++A    PD+V+YS LI  L +  K   A+++ 
Sbjct: 8   NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM +K   PN + +  ++  L +     EA      +  + C+ DV  YN +I    K 
Sbjct: 68  AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G + EA  L+ ++ E+   P   T+NSLIYG  K G+   A  LL+ ++ HG  P  +TY
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           ++ +    ++G   +   L QEM+ +   P  +T+T ++  L K  ++ +A++LL++M  
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            GV P  +TYN +I  F K  DL +A+ LL++M  +  +P   TY+ LI GL     L  
Sbjct: 248 RGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDE 307

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFF 596
           A  +L  +++       + Y T+I      G ++ A   F +M  KG    +  Y+    
Sbjct: 308 ACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYS---- 363

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                            ++ A  +   + S   L   M   G+ PD F
Sbjct: 364 ----------------TLITALGKAARVESACVLFEEMESVGIQPDLF 395



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 157/357 (43%), Gaps = 23/357 (6%)

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SPN   + ++L  L +     EA++ F+ L  +    DVV Y+ +I+   + G    A++
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +  ++  K   P++ T+N+L+    K G+  +A RLL  ++ +G  P   TY   ++   
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G +     L  EM  +   P   TY  +I GL K  + Q+A++LLE+M   G  PD +
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TY+++I    K  +  KAF+L  +M     +P S T+  L+D L   G + +A  LL  +
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM------ 598
           +E  +    V Y  +I      GD+ +A     +M   G +  +  Y+    C+      
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS----CLITGLIK 301

Query: 599 -------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                        M   G PPD      ++    + G L     L   M   G  PD
Sbjct: 302 ASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPD 358



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 64/168 (38%), Gaps = 20/168 (11%)

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +P+ +TYN+++ +  K     +A  L  ++      P   +Y+ LI+ L   G  + A  
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           ++  +Q          Y T++      G   +A+    +M         RD         
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEM---------RD--------- 107

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             NG  PD      ++    + G L   F L A M + G +PD F  N
Sbjct: 108 --NGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYN 153


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 154/506 (30%), Positives = 254/506 (50%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           ++ DAI   +        P+ +  N + S   +    ++  G    M   G+  D ++  
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           I+I+  C    +  A        + G EPD IT+S L  GF L  ++S A  ++ +++  
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
              PD+VT + LI G C  G V E L L + M+  GF+ + + Y  +L+ +CKSG    A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L L  +ME   +K  +V YSI+I  LCK      A+ L+NEM  K I  +   + +++ G
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC      +       +I  N I DVV ++ +ID +VK G + EA +LY ++I + I+P 
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            +T+NSLI GFCK   + +A ++ D +   G EP  VTY+  +N+YC+   +   + L +
Sbjct: 379 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 438

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           E+ +K + P  +TY  ++ G C+  KL  A +L ++M   GV P  +TY  ++   C   
Sbjct: 439 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 498

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
           +L KA ++  +M    +      YNI+I G+C    + +A  L  SL +  +    V Y 
Sbjct: 499 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 558

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +I   C +G + +A   F +M E G
Sbjct: 559 VMIGGLCKKGSLSEADMLFRKMKEDG 584



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 154/504 (30%), Positives = 247/504 (49%), Gaps = 12/504 (2%)

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           YC+      A  +     K G  PD  +++ L++G C+ G + EA+   + M      PD
Sbjct: 144 YCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 203

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            +T S L  G  L  ++S A  +I +++  G  PD VTY  ++   C+ GN    L L  
Sbjct: 204 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR 263

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M  +  K +V+ YS+++ S+CK G  D+AL L  EME  G+K D+VTYS LI GLC   
Sbjct: 264 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 323

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           K     ++  EM  + I P+     A++    ++  + EA+  ++ +I      D + YN
Sbjct: 324 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYN 383

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +IDG+ K   + EA Q++  ++ K   P IVT++ LI  +CK  +V D  RL   I   
Sbjct: 384 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 443

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           GL P+ +TY T +  +C+ G +     L QEM ++ + P+ VTY +++ GLC   +L +A
Sbjct: 444 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 503

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           +++ E M    +T     YN II   C    +  A+ L   +    ++P   TYN++I G
Sbjct: 504 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 563

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE-- 585
           LC  G L  AD L   ++E   +     Y  +I+AH     +  ++    +M   GF   
Sbjct: 564 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 623

Query: 586 ----------ISIRDYTKSFFCMM 599
                     +S R   KSF  M+
Sbjct: 624 SSTIKMVIDMLSDRRLDKSFLDML 647



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 143/517 (27%), Positives = 269/517 (52%), Gaps = 3/517 (0%)

Query: 12  VHDAVFVIAKM---KELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           V+DA+ +   M   + L   +      S +   +  D++      ++++    ++YT +I
Sbjct: 80  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 139

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+  C++ +L  A   L       + P  ++ + +++ +C  G    A  L   M++  
Sbjct: 140 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 199

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  + + LI+GLC+ G + EAL   + M  +G +PD +TY  +          + A 
Sbjct: 200 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 259

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            + +K+  +     +V Y+++I   C+ G+ ++ L L   M  +G K +V+ YS L+  +
Sbjct: 260 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 319

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C  G+ D+   +L EM    + PD+VT+S LI    K+ K+ +A +LYNEM ++ I+P++
Sbjct: 320 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 379

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             + +++ G C++  + EA   FD ++   C  D+V Y+I+I+ Y K   + + ++L+R+
Sbjct: 380 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 439

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  K + P+ +T+N+L+ GFC++GK+  A+ L   +   G+ PS VTY   ++  C+ G 
Sbjct: 440 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 499

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           + + L + ++M+   +      Y ++I G+C   K+ +A  L   +   GV PD +TYN 
Sbjct: 500 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 559

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           +I   CK   L +A  L  +M      P   TYNILI
Sbjct: 560 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 232/437 (53%), Gaps = 1/437 (0%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +++ + P ++ T S +I+GLC + R+ +A++ +       F P  V+   +++R CK G 
Sbjct: 196 VEMKQRP-DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 254

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
           + +A  LF  M +  +      Y+I+I  LC  GS ++AL   N+M   G++ D +TYS 
Sbjct: 255 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 314

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L  G     +     K++++++ +   PD+VT++ LI  + + G + E  +L   M+++G
Sbjct: 315 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 374

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              + I Y+ L+   CK   + EA  +   M + G +PD+VTYSILI   CK  +V   +
Sbjct: 375 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 434

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           +L+ E+ SK + PN+  +  ++LG C+   +  A+  F  ++       VV Y I++DG 
Sbjct: 435 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 494

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
              G + +A++++ ++ + R++  I  +N +I+G C   KV DA  L  ++   G++P  
Sbjct: 495 CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 554

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTY   +   C++G++     L ++M+     P   TY ++I+       L  +V+L+E+
Sbjct: 555 VTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEE 614

Query: 474 MYVIGVTPDQITYNTII 490
           M V G + D  T   +I
Sbjct: 615 MKVCGFSADSSTIKMVI 631



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 209/409 (51%), Gaps = 3/409 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G V +A+ +I +M E   +    TY  +L  L    ++ +  DL+  ++      +V   
Sbjct: 218 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 277

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           SIVID LC+     DA+    E   K     VV+ ++++   C  G  +    +   M+ 
Sbjct: 278 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 337

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + PD  +++ LI      G + EA E  N+M   G+ PD ITY+ L  GF   + +  
Sbjct: 338 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 397

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A ++   ++ KG +PDIVTY++LI  YC+   V++G++L   + S+G   N I Y+ L+ 
Sbjct: 398 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 457

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             C+SG+++ A  L  EM + G+ P +VTY IL+ GLC   +++KA++++ +M   R++ 
Sbjct: 458 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 517

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
               +  I+ G+C    + +A   F SL       DVV YN+MI G  K G++ EA  L+
Sbjct: 518 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 577

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           R++ E   +P   T+N LI        +  +  L++ +K+ G    + T
Sbjct: 578 RKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 626



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 174/362 (48%), Gaps = 32/362 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + G   DA+ +  +M+   +K  + TY+SL                              
Sbjct: 286 KDGSFDDALSLFNEMEMKGIKADVVTYSSL------------------------------ 315

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
             I GLC   +  D    L+E  G+   P VV+ +A++  + K G    AK L+  M+  
Sbjct: 316 --IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 373

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+ PD  +YN LI G C    + EA +  + M   G EPD +TYSIL   +    ++   
Sbjct: 374 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 433

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++ +++  KG  P+ +TY  L+ G+CQ G +    +L + M+S+G   +V+ Y +LL  
Sbjct: 434 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 493

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C +G +++AL +  +M+   +   +  Y+I+I G+C   KV  A  L+  +  K + P+
Sbjct: 494 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 553

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  ++ GLC+K  ++EA M F  +    C  D   YNI+I  ++    +  +V+L  
Sbjct: 554 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 613

Query: 368 QL 369
           ++
Sbjct: 614 EM 615



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 134/282 (47%), Gaps = 9/282 (3%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN------LRHTDIMWDLYDDIKVSE 58
           V+ + G + +A  +  +M    +     TYNSL+        L   + M+DL   +    
Sbjct: 353 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM--VSKGC 410

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
            P ++ T SI+I+  C+  R+ D +   +E + K   P+ ++ N ++  +C+ G    AK
Sbjct: 411 EP-DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 469

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            LF  M+  G+ P   +Y IL+ GLC  G + +ALE    M +  +      Y+I+  G 
Sbjct: 470 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 529

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
              S++  AW +   L  KG  PD+VTY V+I G C+ G++ E   L   M   G   + 
Sbjct: 530 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 589

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
             Y++L+ +      +  ++ L+ EM+  G   D  T  ++I
Sbjct: 590 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 631



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 114/253 (45%), Gaps = 5/253 (1%)

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           IQ ++  N     + ++   G ++  Y  + E ++S      N ++     + KV DA  
Sbjct: 31  IQRLIPLNRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIV-----DIKVNDAID 85

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L +++      P+ + +    +A         +L   + ME   I     T T++I   C
Sbjct: 86  LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 145

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           ++ KL  A  +L   + +G  PD IT++T++  FC    + +A  L+++M      P   
Sbjct: 146 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 205

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           T + LI+GLC+ G +  A  L+  + E+     +V Y  ++   C  G+   A+  F +M
Sbjct: 206 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 265

Query: 580 VEKGFEISIRDYT 592
            E+  + S+  Y+
Sbjct: 266 EERNIKASVVQYS 278


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 153/495 (30%), Positives = 250/495 (50%), Gaps = 6/495 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P + S N ++    K+        L+  M   GL PD  + NILI+  C    ++  L  
Sbjct: 90  PPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAV 149

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M R G  P+ +T++ L KG  L S+IS A  +++K++  G  P++VTY  L+ G C 
Sbjct: 150 LGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCM 209

Query: 216 IGNVEEGLKLREVMLSQ--GF----KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
            GN    +KL E ML+   GF    K N++ Y  ++ S+CK G ID+   L  EM+  G+
Sbjct: 210 TGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGI 269

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            PD+V YS +I G+C   +   A  L+NEM  + + PN      ++  LC+   + EA  
Sbjct: 270 SPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANH 329

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               +I      D   YN +IDG+   G I +A  L+  +  K I    V++N LI G+C
Sbjct: 330 LLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYC 389

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K+G++ +A++L   +    + P+ +TY T +     EG ++    L  EM+   + P   
Sbjct: 390 KSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESC 449

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY +++ GLCK   L EA++L   +      P    +N +I   CK + +  A +L N++
Sbjct: 450 TYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRL 509

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               LEP   TY ++I GLC +G L+NA  L + ++E   +   V + T+++  C   ++
Sbjct: 510 SHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEM 569

Query: 570 HKAMTFFCQMVEKGF 584
            K +    +M EK F
Sbjct: 570 QKVVELLQEMAEKDF 584



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 252/503 (50%), Gaps = 7/503 (1%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           I +  TP  + + + ++  + +  R  D I   +  +     P  ++LN +++ YC L  
Sbjct: 84  IDMQPTPP-ISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNK 142

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            +    +   ML+ G  P+  ++  L+ GLC+   + EA      M R G  P+ +TY  
Sbjct: 143 VDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGT 202

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGS------DPDIVTYTVLICGYCQIGNVEEGLKLRE 227
           L  G  +      A K+ +++L           P++V Y  +I   C+ G +++G +L  
Sbjct: 203 LLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFL 262

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M  +G   +V+AYS ++  MC +GR + A GL  EM   G+ P++VT+++LI  LCK  
Sbjct: 263 EMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAG 322

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           K+ +A  L   M  +  SP++F +  ++ G C +  I +AR  F S+       D V YN
Sbjct: 323 KMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYN 382

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           ++I+GY K G + EA +LYR+++ K I P+++T+N+L+ G  + GKV DA  L   +K+H
Sbjct: 383 VLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVH 442

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
            L P + TY   ++  C+  ++   + L   +E     P+   +  +I GLCK  K++ A
Sbjct: 443 DLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIA 502

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            +L   +   G+ P+ ITY  +I   CK   L  A  L   M      P   T+N L+ G
Sbjct: 503 RELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRG 562

Query: 528 LCVNGDLKNADCLLVSLQEHNIS 550
            C N +++    LL  + E + S
Sbjct: 563 FCQNDEMQKVVELLQEMAEKDFS 585



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 249/540 (46%), Gaps = 23/540 (4%)

Query: 131 PDAFSYNILIHGLCIAGSME--EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           PD       +   C +G ++  EA    N +      P   +++ L      + +     
Sbjct: 53  PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVI 112

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            + +++ + G  PD +T  +LI  YC +  V+ GL +   ML +G   N + ++ L+  +
Sbjct: 113 SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGL 172

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR----- 303
           C   RI EA GLL +M  +G +P++VTY  L+ GLC       A++L+ EM +       
Sbjct: 173 CLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGV 232

Query: 304 -ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I PN   +  I+  LC+  +I + +  F  +       DVV Y+ +I G    G    A
Sbjct: 233 TIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGA 292

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L+ +++++ + P++VTFN LI   CK GK+ +A  LL  +   G  P   TY T ++ 
Sbjct: 293 KGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDG 352

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +C EG I     L   ME+K I    V+Y V+I G CK  ++ EA +L  +M    + P 
Sbjct: 353 FCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPT 412

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            ITYNT++    +   +R A+ L  +M +H+L P S TYNIL+DGLC N  L  A  L  
Sbjct: 413 VITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFH 472

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------- 592
            L+ H+   +   +  +I   C    +  A   F ++  +G E ++  YT          
Sbjct: 473 YLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSG 532

Query: 593 -----KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                K  F  M   G  P+      ++  F Q  ++  V EL   M +    PD   I+
Sbjct: 533 QLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTIS 592



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 250/502 (49%), Gaps = 9/502 (1%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           D + +  +M  + L     T N L+    NL   D    +  ++       N  T + ++
Sbjct: 110 DVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLV 169

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK---- 126
            GLC  SR+ +A   L++     + P+VV+   +++  C  G   +A  L   ML     
Sbjct: 170 KGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGG 229

Query: 127 YG--LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +G  + P+   Y  +I  LC  G +++  E   +M   G+ PD + YS +  G     + 
Sbjct: 230 FGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRW 289

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
            GA  +  +++ +G  P++VT+ VLI   C+ G +EE   L ++M+ +G   +   Y+ L
Sbjct: 290 EGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTL 349

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   C  GRID+A  L   ME+ G++ D V+Y++LI G CK  ++ +A +LY EM  K I
Sbjct: 350 IDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEI 409

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P    +  +L GL  +  + +A   F  + + +   +   YNI++DG  K  ++ EA++
Sbjct: 410 MPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAME 469

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+  L      PSI  FN LI G CK  K+  AR L + +   GLEP+ +TYT  ++  C
Sbjct: 470 LFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLC 529

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G ++    L   ME K   P  VT+  +++G C+  ++Q+ V+LL++M     +PD  
Sbjct: 530 KSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAS 589

Query: 485 TYNTIIRSFCKCKDLRKAFQLL 506
           T + ++    K +  R+   LL
Sbjct: 590 TISIVVDLLSKDEKYREYLHLL 611



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 131/425 (30%), Positives = 223/425 (52%), Gaps = 6/425 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQE--TAGKEFG----PSVVSLNAIMSRYCKLGFAE 115
           NV T   +++GLC       A+   +E       FG    P++V    I+   CK G  +
Sbjct: 196 NVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLID 255

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
             K LF  M   G+ PD  +Y+ +IHG+C  G  E A    N+M   GV P+ +T+++L 
Sbjct: 256 KGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLI 315

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                  ++  A  +++ ++ +G  PD  TY  LI G+C  G +++   L   M S+G +
Sbjct: 316 DALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIE 375

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            + ++Y+VL++  CKSGR+ EA  L  EM    + P ++TY+ L+ GL ++ KV  A  L
Sbjct: 376 TDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNL 435

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           + EM    ++P S  +  +L GLC+   ++EA   F  L   +    + ++N +IDG  K
Sbjct: 436 FGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCK 495

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
              I  A +L+ +L  + + P+++T+  +I+G CK+G++ +A+ L   ++  G  P+ VT
Sbjct: 496 ARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVT 555

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           + T M  +C+   +Q+++ LLQEM  K   P   T ++V+  L K  K +E + LL    
Sbjct: 556 FNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFP 615

Query: 476 VIGVT 480
             G T
Sbjct: 616 AQGQT 620



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 180/360 (50%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +L+ ++K      +V   S +I G+C   R + A     E   +   P+VV+ N ++   
Sbjct: 259 ELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDAL 318

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK G  E A  L  LM++ G  PD F+YN LI G C+ G +++A +    M   G+E DA
Sbjct: 319 CKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDA 378

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           ++Y++L  G+    ++  A K+ ++++ K   P ++TY  L+ G  + G V +   L   
Sbjct: 379 VSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGE 438

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M           Y++LL  +CK+  + EA+ L + +E    +P +  ++ LI GLCK  K
Sbjct: 439 MKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARK 498

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           +  A +L+N +  + + PN   +  ++ GLC+   +  A+  F  +    C  ++V +N 
Sbjct: 499 IEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNT 558

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           ++ G+ +   + + V+L +++ EK  SP   T + ++    K+ K  +   LL T    G
Sbjct: 559 LMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 118/231 (51%), Gaps = 3/231 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRN 62
           Y ++G + +A  +  +M   ++  ++ TYN+LL  L R   +   W+L+ ++KV +    
Sbjct: 388 YCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPE 447

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T +I++DGLC+ + L +A+         +F PS+   N ++   CK    E+A+ LF 
Sbjct: 448 SCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFN 507

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   GL P+  +Y ++IHGLC +G +E A +    M   G  P+ +T++ L +GF    
Sbjct: 508 RLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQND 567

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           ++    +++Q++  K   PD  T ++++    +     E L L     +QG
Sbjct: 568 EMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 170/603 (28%), Positives = 286/603 (47%), Gaps = 44/603 (7%)

Query: 8   RTGMVH----DAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETP 60
           R+G+V     DAV +  +M     +  +  ++   S++   +  D++ DL   +++    
Sbjct: 45  RSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIA 104

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N+YT SI+I+  C+  +L                               L F+ + K  
Sbjct: 105 HNLYTLSIMINCCCRCRKLS------------------------------LAFSAMGK-- 132

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              ++K G  PD  +++ LI+GLC+ G + EALE  + M   G +P  IT + L  G  L
Sbjct: 133 ---IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             ++S A  +I +++  G  P+ VTY  ++   C+ G     ++L   M  +  KL+ + 
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS+++  +CK G +D A  L  EME  G K D++ Y+ LIRG C   +     +L  +M 
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            ++I+P+  A  A++    ++  + EA      +I      D V Y  +IDG+ K   + 
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  +   ++ K   P+I TFN LI G+CK   + D   L   + L G+    VTY T +
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             +CE G ++    L QEM ++ + P  V+Y +++ GLC   + ++A+++ E +    + 
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            D   YN II   C    +  A+ L   + L  ++P   TYNI+I GLC  G L  AD L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
              ++E   S     Y  +I+AH  EGD  K+     ++   GF  S+   T      ML
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF--SVDASTVKMVVDML 607

Query: 601 SNG 603
           S+G
Sbjct: 608 SDG 610



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 252/526 (47%), Gaps = 20/526 (3%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  M +    P    ++ L   +      +  L+    M   G+  +  T SI+  
Sbjct: 56  AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
                 ++S A+  + K++  G +PD VT++ LI G C  G V E L+L + M+  G K 
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +I  + L++ +C +G++ +A+ L+  M   G +P+ VTY  +++ +CK  +   A++L 
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M  ++I  ++  +  I+ GLC+   +  A   F+ + +     D+++Y  +I G+   
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   +  +L R +I+++I+P +V F++LI  F K GK+ +A  L   +   G+ P  VTY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           T+ ++ +C+E  + +   +L  M +K  GP   T+ ++I G CK   + + ++L   M +
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            GV  D +TYNT+I+ FC+   L  A +L  +M    + P   +Y IL+DGLC NG+ + 
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFF 596
           A  +   +++  + L    Y  II   C    V  A   FC +                 
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP---------------- 519

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                 G  PD +   +M+    + G L     L   M + G  P+
Sbjct: 520 ----LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 152/490 (31%), Positives = 249/490 (50%), Gaps = 20/490 (4%)

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           +  +  M   G+ PD  T SIL   F  L ++  A+ V  K++  G  PD VT+  LI G
Sbjct: 115 ISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLING 174

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            C++G   + ++  +   + G +  V  Y+ +++ +CK G    A GL  +ME  G +P+
Sbjct: 175 LCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPN 234

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY+ILI  LCK   V++A+ +++ M +KRISP+ F + +++ GLC      EA    +
Sbjct: 235 VVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLN 294

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +   N + ++  +N+++D   K G + EA  +++ + E  + P +VT++SL+YG+    
Sbjct: 295 EMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRM 354

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           ++ +AR+L D +   G +P A +Y   +  YC+   I     L  EM  + + P +V Y 
Sbjct: 355 EIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYN 414

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I GLC+  +L+EA  L ++M+  G  PD  TY+ ++  FCK   L KAF+L   M   
Sbjct: 415 TLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQST 474

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            L+P  A YNILID +C  G+LK+A  L   L    +      YTTII   C EG + +A
Sbjct: 475 YLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEA 534

Query: 573 MTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
           +  F  M                      +G PPD+    V++  F Q  D     +L  
Sbjct: 535 LEAFRNME--------------------GDGCPPDEFSYNVIIRGFLQYKDESRAAQLIG 574

Query: 633 VMIKSGLLPD 642
            M   G + +
Sbjct: 575 EMRDRGFVAE 584



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 244/460 (53%), Gaps = 2/460 (0%)

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           E AG    P + +L+ ++  +  L   ++A  +F  M+K GL PDA ++N LI+GLC  G
Sbjct: 122 ELAG--LSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVG 179

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
              +A+EF +D    G +P   TY+ +  G   + + + A  + +K+   G  P++VTY 
Sbjct: 180 KFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYN 239

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +LI   C+   V E L +   M ++    ++  Y+ L+  +C   R  EA  LL EM ++
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL 299

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
            + P++ T+++L+  +CK+ KV +A  ++  M    + P+   + +++ G   +  I EA
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEA 359

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           R  FD++I   C  D   YNI+I GY K   I EA QL+ ++I + ++P  V +N+LI+G
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            C+ G++ +A+ L   +  +G  P   TY+  ++ +C+EG + +   L + M++  + P 
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD 479

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
              Y ++I  +CK   L++A +L  +++V G+ P+   Y TII + CK   L +A +   
Sbjct: 480 IAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFR 539

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            M      P   +YN++I G     D   A  L+  +++ 
Sbjct: 540 NMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDR 579



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 216/442 (48%), Gaps = 3/442 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRN 62
           +S    V  A  V +KM +L L+    T+N+L+  L          + +DD + S     
Sbjct: 140 FSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPT 199

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT + +I+GLC+      A    ++       P+VV+ N ++   CK      A  +F 
Sbjct: 200 VYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFS 259

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M    + PD F+YN LI GLC     +EA    N+M    + P+  T+++L        
Sbjct: 260 YMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEG 319

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++S A  V + +   G +PD+VTY+ L+ GY     + E  KL + M+++G K +  +Y+
Sbjct: 320 KVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYN 379

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L+   CK+ RIDEA  L  EM   GL PD V Y+ LI GLC+  ++ +A  L+  M S 
Sbjct: 380 ILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSN 439

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P+ F +  +L G C++  + +A   F  +  +    D+ +YNI+ID   K GN+ +A
Sbjct: 440 GNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDA 499

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +L+ +L  + + P++  + ++I   CK G + +A      ++  G  P   +Y   +  
Sbjct: 500 RKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRG 559

Query: 423 YCEEGNIQRLLALLQEMETKAI 444
           + +  +  R   L+ EM  +  
Sbjct: 560 FLQYKDESRAAQLIGEMRDRGF 581



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 200/413 (48%), Gaps = 3/413 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G    AV      +    + ++ TY +++  L     T     L+  ++ +    NV 
Sbjct: 177 KVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVV 236

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I+ID LC+   + +A+        K   P + + N+++   C     + A  L   M
Sbjct: 237 TYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEM 296

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
               + P+ F++N+L+  +C  G + EA      M   GVEPD +TYS L  G+ L  +I
Sbjct: 297 TSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEI 356

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A K+   ++ KG  PD  +Y +LI GYC+   ++E  +L   M+ QG   + + Y+ L
Sbjct: 357 VEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTL 416

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +C+ GR+ EA  L   M + G  PDL TYS+L+ G CK+  + KA +L+  M S  +
Sbjct: 417 IHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYL 476

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+   +  ++  +C+   + +AR  F  L +   + +V +Y  +I+   K G + EA++
Sbjct: 477 KPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALE 536

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            +R +      P   ++N +I GF +    + A +L+  ++  G    A T T
Sbjct: 537 AFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 156/356 (43%), Gaps = 50/356 (14%)

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D+   +I+ID +  L  +  A  ++ ++I+  + P  VTFN+LI G CK GK A A    
Sbjct: 129 DIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFF 188

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           D  +  G +P+  TYTT +N  C+ G       L ++ME     P  VTY ++I  LCK 
Sbjct: 189 DDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKD 248

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
             + EA+ +   M    ++PD  TYN++I+  C  +  ++A  LLN+M   N+ P   T+
Sbjct: 249 KLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTF 308

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI---------------------- 559
           N+L+D +C  G +  A  +  ++ E  +    V Y+++                      
Sbjct: 309 NVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMIT 368

Query: 560 -------------IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------------- 592
                        IK +C    + +A   F +M+ +G      +Y               
Sbjct: 369 KGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLRE 428

Query: 593 -KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            +  F  M SNG  PD     ++L  F + G LG  F L  VM  + L PD  + N
Sbjct: 429 AQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYN 484



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 147/335 (43%), Gaps = 16/335 (4%)

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI-GEAVQLYRQLIEKRISPSIVTFN 382
           I +A   F+ ++    +  ++ +  ++   VK+G   G  + L +Q+    +SP I T +
Sbjct: 75  IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
            LI  F    +V  A  +   +   GL+P AVT+ T +N  C+ G   + +    + E  
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
              PT  TYT +I GLCK  +   A  L + M   G  P+ +TYN +I S CK K + +A
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
             + + M    + P   TYN LI GLC     K A  LL  +   NI      +  ++ A
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPD 607
            C EG V +A   F  M E G E  +  Y+               +  F  M++ G  PD
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPD 374

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                +++  + +   +    +L   MI  GL PD
Sbjct: 375 AFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPD 409


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 150/474 (31%), Positives = 263/474 (55%), Gaps = 5/474 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKG 119
           +V T +I+I  LC+  +++ AIL ++E   ++FG  P   +   IM  + + G  + A  
Sbjct: 194 DVSTFNILIKALCRAHQIRPAILLMEEM--EDFGLLPDEKTFTTIMQGFIEEGNLDGAMR 251

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG-RHGVEPDAITYSILAKGF 178
           +   M++ G      + N+L++G C  G +EEAL F  +M  R G  PD  T+++L  G 
Sbjct: 252 VKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGL 311

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +  A +V+  +L +G DPDI TY  LI G C++G V+E +K+   M+ +    N 
Sbjct: 312 SKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNT 371

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y+ ++S++CK  +++EA  L   +   G+ PD+ TY+ LI+GLC       A++LY E
Sbjct: 372 VTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKE 431

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M +K   P+ F +  ++  LC +  + EA      + +S C ++V+ YN +IDG+ K   
Sbjct: 432 MKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKR 491

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I EA +++ Q+  + +S + VT+N+LI G CK+ +V +A +L+D + + GL P   TY +
Sbjct: 492 IAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNS 551

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +  +C+ G+I++   ++Q M +    P  VTY  +I GLCK  +++ A +LL  + + G
Sbjct: 552 LLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKG 611

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +      YN +I++  + K  ++A +L  +M      P + TY I+  GLC  G
Sbjct: 612 INLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGG 665



 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 162/535 (30%), Positives = 274/535 (51%), Gaps = 25/535 (4%)

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           KL   E+A      M+  G+ PD  ++NILI  LC A  +  A+    +M   G+ PD  
Sbjct: 175 KLKLVEIAHSN---MVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEK 231

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LREV 228
           T++ + +GF     + GA +V ++++  G     VT  VL+ G+C+ G +EE L+ + E+
Sbjct: 232 TFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEM 291

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
            L +GF  +   +++L++ + K+G +  AL ++  M   G  PD+ TY+ LI GLCK  +
Sbjct: 292 SLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGE 351

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V +A+++ N+M  +  SPN+  +  I+  LC++  + EA      L     + DV  YN 
Sbjct: 352 VDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNS 411

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I G     N   A++LY+++  K   P   T+N LI   C  GK+ +A  LL  +++ G
Sbjct: 412 LIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSG 471

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
              + +TY T ++ +C+   I     +  +ME + +    VTY  +I GLCK  +++EA 
Sbjct: 472 CARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEAS 531

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           QL++ M + G+ PD+ TYN+++  FCK  D++KA  ++  M     EP   TY  LI GL
Sbjct: 532 QLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGL 591

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C  G ++ A  LL ++Q   I+LT  AY  +I+A        +A+  F +M+EK      
Sbjct: 592 CKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEK------ 645

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ-GGDLGSVFELAAVMIKSGLLPD 642
                            PD    +++     Q GG +G   +    M++ G +P+
Sbjct: 646 --------------AEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPE 686



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 115/279 (41%), Gaps = 22/279 (7%)

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           +    PS   F  +++   K G+    + +L  +K+        +   F+ +Y   G   
Sbjct: 82  QPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYN 141

Query: 431 RLLALLQEMETK--AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
            +L  +  ME +   +  TH  Y  ++  L    KL+       +M   G+ PD  T+N 
Sbjct: 142 EILQFVDAMEVEFGVVANTHF-YNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNI 200

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I++ C+   +R A  L+ +M    L P   T+  ++ G    G+L  A  +   + E  
Sbjct: 201 LIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAG 260

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ 608
             +T V    ++   C EG + +A+ F  +M       S+R+            GF PD+
Sbjct: 261 CVVTNVTVNVLVNGFCKEGRIEEALRFIEEM-------SLRE------------GFFPDK 301

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               +++    + G +    E+  +M++ G  PD +  N
Sbjct: 302 YTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYN 340


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 159/484 (32%), Positives = 243/484 (50%), Gaps = 37/484 (7%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + +IDGLC+ +    A    +     E  PS+V+ N ++    + G  E A  LF
Sbjct: 9   NVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALF 68

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF-------------------------- 155
             ML    H D  S+NIL+ GLC AG +E ALEF                          
Sbjct: 69  QEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKAN 127

Query: 156 --------TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
                      M   G  PD ITY+IL  G    S+++ AW+V++++L  G  P++VTY 
Sbjct: 128 RVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYN 187

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            L+ G C+   V + L L   M  +G   NV+ Y  L+  +CK GR+ +A  +L +M   
Sbjct: 188 SLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK 247

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  PDL+ Y++LI GLCK D+V ++I L     S  I P+   + +++ GLC    + EA
Sbjct: 248 GGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEA 307

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                 +    C  DV+LY+ +IDG  K G + EA  LY  +        +VT+++LI G
Sbjct: 308 CRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDG 367

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G+V +A  LL  +   G  PS +TY + +   C+  ++   + L++EME     P+
Sbjct: 368 LCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPS 427

Query: 448 HVTYTVVIKGLCKQWKLQE-AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL- 505
            VTY ++I G+C+  ++   A+   ++M   GV PD ITY+ ++    K KDL +   L 
Sbjct: 428 AVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLV 487

Query: 506 LNQM 509
           L+QM
Sbjct: 488 LDQM 491



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 139/434 (32%), Positives = 237/434 (54%), Gaps = 2/434 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+VV+ N+++   CK    + A+ LF  M      P   +YN L+ GL   G +E A+  
Sbjct: 8   PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMAL 67

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M       D I+++IL  G     +I  A +  +K+  + S P+++TY+VLI G C+
Sbjct: 68  FQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDDRCS-PNVITYSVLIDGLCK 125

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              V + ++L E M ++G   +VI Y++L+  +CK  ++  A  +L EM   G  P+LVT
Sbjct: 126 ANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVT 185

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ L+ GLC+  +V  A+ L  +M  +  +PN   +G ++ GLC+   + +A      +I
Sbjct: 186 YNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI 245

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D+++YN++I+G  K   + E++ L R+ +   I P +VT++S+IYG C++ ++ 
Sbjct: 246 DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLD 305

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A RLL  +K  G  P  + Y+T ++  C+ G +     L + M         VTY+ +I
Sbjct: 306 EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLI 365

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLCK  ++ EA  LL  M  +G  P  +TYN++I+  C    L +A +L+ +M   N  
Sbjct: 366 DGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCA 425

Query: 516 PTSATYNILIDGLC 529
           P++ TYNILI G+C
Sbjct: 426 PSAVTYNILIHGMC 439



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 145/461 (31%), Positives = 235/461 (50%), Gaps = 3/461 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M  +G  P+  +YN LI GLC     + A E    M      P  +TY+ L  G     +
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A  + Q++L + S  D++++ +L+ G C+ G +E  L+    M       NVI YSV
Sbjct: 61  LERAMALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSV 118

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +CK+ R+ +A+ LL  M+A G  PD++TY+IL+ GLCK+ KV  A ++  EM    
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN   + ++L GLC    +++A      +    C  +VV Y  +IDG  K+G + +A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +   +I+K  +P ++ +N LI G CK  +V ++  LL      G++P  VTY++ +   
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C    +     LL  ++++   P  + Y+ +I GLCK  K+ EA  L E M   G   D 
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADV 358

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TY+T+I   CK   + +A  LL +M      P++ TYN LI GLC    L  A  L+  
Sbjct: 359 VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE 418

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHK-AMTFFCQMVEKG 583
           ++  N + + V Y  +I   C    V   A+ +F +M++ G
Sbjct: 419 MERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNG 459



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 207/395 (52%), Gaps = 2/395 (0%)

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G +P++VTY  LI G C+    +   +L E M S     +++ Y+ LL  + ++G+++ A
Sbjct: 5   GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           + L  EM       D+++++IL+ GLC+  K+  A++ + +M   R SPN   +  ++ G
Sbjct: 65  MALFQEM-LDRRSHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSVLIDG 122

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC+   +++A    +S+    C  DV+ Y I++DG  K   +  A ++ R++++    P+
Sbjct: 123 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 182

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           +VT+NSL++G C+  +V+DA  L+  +   G  P+ VTY T ++  C+ G ++   A+L 
Sbjct: 183 LVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLA 242

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           +M  K   P  + Y ++I GLCK  ++ E++ LL      G+ PD +TY+++I   C+  
Sbjct: 243 DMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSN 302

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            L +A +LL  +      P    Y+ LIDGLC  G +  A  L   +         V Y+
Sbjct: 303 RLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYS 362

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           T+I   C  G V +A     +MV  G   S   Y 
Sbjct: 363 TLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYN 397



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 201/434 (46%), Gaps = 17/434 (3%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   G + NV+ Y+ L+  +CK+   D A  L   M++V   P +VTY+ L+ GL +  K
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + +A+ L+ EM  +R S +  +   ++ GLC    I  A  +F  +    C  +V+ Y++
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYSV 118

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDG  K   + +AV+L   +  +  SP ++T+  L+ G CK  KVA A  +L  +   G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
             P+ VTY + ++  C    +   LAL+++M  +   P  VTY  +I GLCK  ++++A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            +L DM   G TPD + YN +I   CK   + ++  LL +     ++P   TY+ +I GL
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C +  L  A  LL+ ++        + Y+T+I   C  G V +A   +  M   G +  +
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADV 358

Query: 589 RDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             Y+                     M+  G PP       ++        L    EL   
Sbjct: 359 VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE 418

Query: 634 MIKSGLLPDKFLIN 647
           M +S   P     N
Sbjct: 419 MERSNCAPSAVTYN 432



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 190/362 (52%), Gaps = 4/362 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           +   V  AV ++  MK       + TY  L+  L         W++  ++  +    N+ 
Sbjct: 125 KANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLV 184

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + ++ GLC+  R+ DA+  +++   +   P+VV+   ++   CK+G  + A  +   M
Sbjct: 185 TYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADM 244

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G  PD   YN+LI+GLC A  ++E++         G++PD +TYS +  G    +++
Sbjct: 245 IDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRL 304

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +++  +  +G  PD++ Y+ LI G C+ G V+E   L EVM   G   +V+ YS L
Sbjct: 305 DEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTL 364

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +CK+GR+DEA  LL  M  +G  P  +TY+ LI+GLC  + + +AI+L  EM     
Sbjct: 365 IDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNC 424

Query: 305 SPNSFAHGAILLGLCEKEMITEARM-YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           +P++  +  ++ G+C  E +  A + YF  +I +  I D + Y+I+++G  K  ++ E  
Sbjct: 425 APSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELR 484

Query: 364 QL 365
            L
Sbjct: 485 HL 486



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 202/398 (50%), Gaps = 5/398 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R G +  A+    KM +     ++ TY+ L+  L          +L + +K      +V 
Sbjct: 91  RAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVI 149

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I++DGLC++S++  A   L+E       P++V+ N+++   C+      A  L   M
Sbjct: 150 TYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM 209

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G  P+  +Y  LI GLC  G +++A     DM   G  PD + Y++L  G     Q+
Sbjct: 210 TCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQV 269

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             +  ++++ +  G  PD+VTY+ +I G C+   ++E  +L   + S+G   +VI YS L
Sbjct: 270 DESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTL 329

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +CK+G++DEA  L   M   G   D+VTYS LI GLCK  +V +A  L   M     
Sbjct: 330 IDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGT 389

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI-GEAV 363
            P++  + +++ GLC+   + EA    + +  SNC    V YNI+I G  ++  +   A+
Sbjct: 390 PPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAAL 449

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
             ++++I+  + P  +T++ L+ G  K+  + + R L+
Sbjct: 450 DYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLV 487


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 254/471 (53%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T +++I  LC+  +L+ AIL L+E A     P  ++   +M  + + G    A  + 
Sbjct: 157 DVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMK 216

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML YG      S  +L++G C  G +EEAL F  ++   G  PD +T++ L  GF  +
Sbjct: 217 KQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRI 276

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             ++ A  ++  ++ KG DPD+ TY  LI G C++G  E+ +++ + M+ +    N + Y
Sbjct: 277 GNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTY 336

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+S++CK   I+ A  L   + + GL PD+ T++ LI+GLC       A++++ EM +
Sbjct: 337 NTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKN 396

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   P+ F +  ++  LC +  + EA M    +  S C ++ V+YN +IDG  K   I +
Sbjct: 397 KGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIED 456

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +++ Q+    +S S VT+N+LI G CKN +V +A +L+D + + GL+P   TY + + 
Sbjct: 457 AEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLT 516

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C  G+I++   ++Q M +    P   TY  +I GLC+  ++  A +LL  + + G+  
Sbjct: 517 YFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVL 576

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
               YN +I++    K  ++  +L  +M   +  P + T+ I+  GLC  G
Sbjct: 577 TPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGG 627



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 250/515 (48%), Gaps = 23/515 (4%)

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
           HP   +  +L+  L  + S +        +   G  P+A T++ L + F    +I    K
Sbjct: 53  HPLPPNETLLLQ-LTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLK 111

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           +++  L  G  PD   Y + +    +   ++    L   M+++G  L+V  ++VL+ ++C
Sbjct: 112 ILENEL--GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALC 169

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K+ ++  A+ +L EM   GLKPD +T++ L++G  ++  ++ A+++  +M        + 
Sbjct: 170 KAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNV 229

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
           +   ++ G C++  + EA  +   +       D V +N +++G+ ++GN+ +A+ +   +
Sbjct: 230 SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFM 289

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           IEK   P + T+NSLI G CK G+   A  +L  + L    P+ VTY T ++A C+E  I
Sbjct: 290 IEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEI 349

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           +    L + + +K + P   T+  +I+GLC       A+++ E+M   G  PD+ TY+ +
Sbjct: 350 EAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSIL 409

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I S C  + L++A  LL +M        +  YN LIDGLC +  +++A+ +   ++   +
Sbjct: 410 IDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGV 469

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
           S + V Y T+I   C    V +A     QM+ +G +                    PD+ 
Sbjct: 470 SRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLK--------------------PDKF 509

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
               +L  F + GD+    ++   M  +G  PD F
Sbjct: 510 TYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIF 544



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/498 (24%), Positives = 209/498 (41%), Gaps = 68/498 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + R G V+DA+ ++  M E      + TYNSL                            
Sbjct: 273 FCRIGNVNDALDIVDFMIEKGFDPDVYTYNSL---------------------------- 304

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
               I G+C+    + AI  LQ+   +E  P+ V+ N ++S  CK    E A  L  +++
Sbjct: 305 ----ISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILV 360

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             GL PD  ++N LI GLC++ + + A+E   +M   G +PD  TYSIL        ++ 
Sbjct: 361 SKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLK 420

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  +++++   G   + V Y  LI G C+   +E+  ++ + M   G   + + Y+ L+
Sbjct: 421 EALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLI 480

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +CK+ R++EA  L+ +M   GLKPD  TY+ L+   C+   + KA  +   M S    
Sbjct: 481 DGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCE 540

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+ F +G ++ GLC    +  A     S+ M   +     YN +I          E ++L
Sbjct: 541 PDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRL 600

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           +R+++EK   P  +T   +  G C  G                                 
Sbjct: 601 FREMMEKSDPPDALTHKIVFRGLCNGG--------------------------------- 627

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G IQ  +    EM  K I P   ++  + +GLC        ++L+  +       ++ T
Sbjct: 628 -GPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERET 686

Query: 486 YNTIIRSFCKCKDLRKAF 503
             ++IR F K +    A 
Sbjct: 687 --SMIRGFLKIRKFNDAL 702



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 22/248 (8%)

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           LL  +K  G  P+A T+ T + ++     I+ LL +L+        P    Y + +  L 
Sbjct: 77  LLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELGFKPDTNFYNIALNALV 134

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           +  KL+    L   M   G+  D  T+N +I++ CK   LR A  +L +M  H L+P   
Sbjct: 135 EDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEI 194

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           T+  L+ G    GDL  A  +   +  +   LT V+   ++   C EG V +A+ F  ++
Sbjct: 195 TFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEV 254

Query: 580 VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
            E+G                    F PDQ     ++  F + G++    ++   MI+ G 
Sbjct: 255 SEEG--------------------FSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGF 294

Query: 640 LPDKFLIN 647
            PD +  N
Sbjct: 295 DPDVYTYN 302


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 147/488 (30%), Positives = 262/488 (53%), Gaps = 3/488 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T +++I  LC+  +L+ AIL L++       P   +   +M  Y + G  + A  + 
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH-GVEPDAITYSILAKGFHL 180
             M+++G      S N+++HG C  G +E+AL F  +M    G  PD  T++ L  G   
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A +++  +L +G DPD+ TY  +I G C++G V+E +++ + M+++    N + 
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+S++CK  +++EA  L   + + G+ PD+ T++ LI+GLC       A++L+ EM 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           SK   P+ F +  ++  LC K  + EA      + +S C + V+ YN +IDG+ K     
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA +++ ++    +S + VT+N+LI G CK+ +V DA +L+D + + G +P   TY + +
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             +C  G+I++   ++Q M +    P  VTY  +I GLCK  +++ A +LL  + + G+ 
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA-TYNILIDGLCV-NGDLKNAD 538
                YN +I+   + +   +A  L  +M   N  P  A +Y I+  GLC   G ++ A 
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAV 667

Query: 539 CLLVSLQE 546
             LV L E
Sbjct: 668 DFLVELLE 675



 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 165/602 (27%), Positives = 299/602 (49%), Gaps = 24/602 (3%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLN 102
           D M  + +D+K S       T  I+I+   Q   LQD IL + +    EFG  P     N
Sbjct: 100 DDMKKILEDMKSSRCEMGTSTFLILIESYAQ-FELQDEILSVVDWMIDEFGLKPDTHFYN 158

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
            +++        ++ +     M  +G+ PD  ++N+LI  LC A  +  A+    DM  +
Sbjct: 159 RMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSY 218

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G+ PD  T++ + +G+     + GA ++ ++++  G     V+  V++ G+C+ G VE+ 
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278

Query: 223 LKLREVMLSQ-GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
           L   + M +Q GF  +   ++ L++ +CK+G +  A+ ++  M   G  PD+ TY+ +I 
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           GLCK  +V +A+++ ++M ++  SPN+  +  ++  LC++  + EA      L     + 
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           DV  +N +I G     N   A++L+ ++  K   P   T+N LI   C  GK+ +A  +L
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             ++L G   S +TY T ++ +C+    +    +  EME   +    VTY  +I GLCK 
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++++A QL++ M + G  PD+ TYN+++  FC+  D++KA  ++  M  +  EP   TY
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
             LI GLC  G ++ A  LL S+Q   I+LT  AY  +I+    +    +A+  F +M+E
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAF-HQGGDLGSVFELAAVMIKSGLL 640
           +                   N  PPD     ++     + GG +    +    +++ G +
Sbjct: 639 Q-------------------NEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFV 679

Query: 641 PD 642
           P+
Sbjct: 680 PE 681



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/368 (20%), Positives = 154/368 (41%), Gaps = 25/368 (6%)

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKR--ISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           L+  L  Q     A++L+N + SK+   SP    +  ILL L       + +   + +  
Sbjct: 53  LLDSLRSQPDDSAALRLFN-LASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKS 111

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVA 395
           S C      + I+I+ Y +     E + +   +I++  + P    +N ++        + 
Sbjct: 112 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLK 171

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
                   + + G++P   T+   + A C    ++  + +L++M +  + P   T+T V+
Sbjct: 172 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN-L 514
           +G  ++  L  A+++ E M   G +   ++ N I+  FCK   +  A   + +M   +  
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P   T+N L++GLC  G +K+A  ++  + +         Y ++I   C  G+V +A+ 
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351

Query: 575 FFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
              QM+        RD +             P+      ++    +   +    ELA V+
Sbjct: 352 VLDQMI-------TRDCS-------------PNTVTYNTLISTLCKENQVEEATELARVL 391

Query: 635 IKSGLLPD 642
              G+LPD
Sbjct: 392 TSKGILPD 399



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 20/274 (7%)

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
           SP    +  ++    ++G   D +++L+ +K    E    T+   + +Y +      +L+
Sbjct: 80  SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILS 139

Query: 435 LLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           ++  M +   + P    Y  ++  L     L+        M V G+ PD  T+N +I++ 
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C+   LR A  +L  M  + L P   T+  ++ G    GDL  A  +   + E   S + 
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
           V+   I+   C EG V  A+ F  +M  +                   +GF PDQ     
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQ-------------------DGFFPDQYTFNT 300

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           ++    + G +    E+  VM++ G  PD +  N
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 40/264 (15%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G + +A+ ++ +M+      S+ TYN+L+        T    +++D+++V    RN  T 
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508

Query: 67  SIVIDGLCQQSRLQDAILFL-----------------------------------QETAG 91
           + +IDGLC+  R++DA   +                                   Q    
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
               P +V+   ++S  CK G  EVA  L   +   G++    +YN +I GL       E
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628

Query: 152 ALEFTNDM-GRHGVEPDAITYSILAKGF-HLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           A+    +M  ++   PDA++Y I+ +G  +    I  A   + +LL KG  P+  +  +L
Sbjct: 629 AINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688

Query: 210 ICGYCQIGNVEEGLKLREVMLSQG 233
             G   +   E  +KL  +++ + 
Sbjct: 689 AEGLLTLSMEETLVKLVNMVMQKA 712


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 173/600 (28%), Positives = 291/600 (48%), Gaps = 60/600 (10%)

Query: 13  HDAVFVIAKMK-------------ELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKV 56
           HDA F++  ++             +L  K+S+ +YN LL  L      D M  LY ++ +
Sbjct: 120 HDATFLLNLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEM-L 178

Query: 57  SETPRNVYTNSIVIDGL----CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
           ++   +V+ N I ++ +    C+   +  A LF       E GP + +  +++  YC+  
Sbjct: 179 TDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRND 238

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
             E A G+FC+M +     +A SY  LIHGLC AG + EALEF                 
Sbjct: 239 DVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEF----------------- 277

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
                          W  +++    G  P + TYTVL+C  C+ G   E L L   M  +
Sbjct: 278 ---------------WARMRE---DGCFPTVRTYTVLVCALCESGRELEALSLFGEMRER 319

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G + NV  Y+VL+  +CK GR+DEAL +L EM   G+ P +V ++ LI   CK+  +  A
Sbjct: 320 GCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDA 379

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           + +   M SK++ PN   +  ++ G C  + +  A    + ++ S    DVV YN +I G
Sbjct: 380 VGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHG 439

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
             ++G +  A +L+R +I    SP   TFN+ +   C+ G+V +A ++L+++K   ++ +
Sbjct: 440 LCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKAN 499

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
              YT  ++ YC+ G I+   +L + M  +   P  +T+ V+I GL K+ K+Q+A+ L+E
Sbjct: 500 EHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVE 559

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           DM    V P   TYN ++    K  D  +A ++LN++     +P   TY   I   C  G
Sbjct: 560 DMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQG 619

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            L+ A+ +++ ++   + L    Y  +I A+   G +  A     +M   G E S   Y+
Sbjct: 620 RLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYS 679



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 169/658 (25%), Positives = 304/658 (46%), Gaps = 65/658 (9%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVY 64
            G +H+A+   A+M+E     +++TY  L+  L    R  + +  L+ +++      NVY
Sbjct: 268 AGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEAL-SLFGEMRERGCEPNVY 326

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +++ID LC++ R+ +A+  L E   K   PSVV  NA++  YCK G  E A G+  LM
Sbjct: 327 TYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLM 386

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
               + P+  +YN LI G C   SM+ A+   N M    + PD +TY+ L  G   +  +
Sbjct: 387 ESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVV 446

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++ + ++  G  PD  T+   +   C++G V E  ++ E +  +  K N  AY+ L
Sbjct: 447 DSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTAL 506

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   CK+G+I+ A  L   M A    P+ +T++++I GL K+ KV  A+ L  +M    +
Sbjct: 507 IDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDV 566

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P                                    +  YNI+++  +K  +   A +
Sbjct: 567 KPT-----------------------------------LHTYNILVEEVLKEYDFDRANE 591

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +  +LI     P++VT+ + I  +C  G++ +A  ++  IK  G+   +  Y   +NAY 
Sbjct: 592 ILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYG 651

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE-DMYVIGVTPDQ 483
             G +     +L+ M      P+++TY++++K L  +   +E    +  D+ +  ++ D 
Sbjct: 652 CMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVD- 710

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
              NT I S     D      L  +M      P   TY+ LI+GLC  G L  A  L   
Sbjct: 711 ---NTDIWSKI---DFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHH 764

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG---------------FEISI 588
           ++E  IS +++ + +++ + C  G   +A+T    M+E                 FE   
Sbjct: 765 MREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMN 824

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG--LLPDKF 644
           ++  ++ FC +L  G+  D+   +V++    + G +    EL  +M K+G  L P+ +
Sbjct: 825 KEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETY 882



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 239/516 (46%), Gaps = 27/516 (5%)

Query: 135 SYNILIHGLCIAGSMEEALEFTNDM---GRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           SYN L+  L     ++E +    +M     + V P+ IT + +   +  L  ++ A    
Sbjct: 153 SYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFF 212

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            ++L     PD+ TYT L+ GYC+  +VE    +  VM  +    N ++Y+ L+  +C++
Sbjct: 213 VRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEA 268

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G++ EAL     M   G  P + TY++L+  LC+  +  +A+ L+ EM  +   PN + +
Sbjct: 269 GKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTY 328

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++  LC++  + EA    + ++       VV +N +I  Y K G + +AV +   +  
Sbjct: 329 TVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMES 388

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K++ P++ T+N LI GFC+   +  A  LL+ +    L P  VTY T ++  CE G +  
Sbjct: 389 KKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDS 448

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              L + M      P   T+   +  LC+  ++ EA Q+LE +    V  ++  Y  +I 
Sbjct: 449 ASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALID 508

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            +CK   +  A  L  +M      P S T+N++IDGL   G +++A  L+  + + ++  
Sbjct: 509 GYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKP 568

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEIC 611
           T   Y  +++    E D  +A     +++  G++ ++  YT                   
Sbjct: 569 TLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYT------------------- 609

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              + A+   G L    E+   +   G+L D F+ N
Sbjct: 610 -AFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYN 644



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 194/421 (46%), Gaps = 19/421 (4%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL------YNLRHTDIMWDLYDDIKVSETPR 61
           R G V +A  ++  +KE  +K +   Y +L+        + H      L+  +   E   
Sbjct: 477 RMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAA---SLFKRMLAEECLP 533

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T +++IDGL ++ ++QDA+L +++ A  +  P++ + N ++    K    + A  + 
Sbjct: 534 NSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEIL 593

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ++  G  P+  +Y   I   C  G +EEA E    +   GV  D+  Y++L   +  +
Sbjct: 594 NRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCM 653

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A+ V++++   G +P  +TY++L+       + +EG        S    L+V   
Sbjct: 654 GLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEG--------SNPVGLDVSLT 705

Query: 242 SVLLSSMCKSGRIDEALG--LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           ++ + +     +ID  +   L  +M   G  P+L TYS LI GLCK  +++ A  LY+ M
Sbjct: 706 NISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHM 765

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               ISP+   H ++L   C+  M  EA    DS++  + +  +  Y ++I G  +  N 
Sbjct: 766 REGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNK 825

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A  ++  L+    +   V +  LI G  K G V     LL+ ++ +G      TY+  
Sbjct: 826 EKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSML 885

Query: 420 M 420
           M
Sbjct: 886 M 886



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 118/520 (22%), Positives = 213/520 (40%), Gaps = 67/520 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + GM+ DAV V+  M+   +  +++TYN L+      +  D    L + +  S+   +
Sbjct: 370 YCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPD 429

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIM----------------- 105
           V T + +I GLC+   +  A    +      F P   + NA M                 
Sbjct: 430 VVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILE 489

Query: 106 ------------------SRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
                               YCK G  E A  LF  ML     P++ ++N++I GL   G
Sbjct: 490 SLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEG 549

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            +++A+    DM +  V+P   TY+IL +          A +++ +L+  G  P++VTYT
Sbjct: 550 KVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYT 609

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
             I  YC  G +EE  ++   + ++G  L+   Y++L+++    G +D A G+L  M   
Sbjct: 610 AFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGT 669

Query: 268 GLKPDLVTYSILIRGLCKQ---------------------------DKVHKAIQ--LYNE 298
           G +P  +TYSIL++ L  +                            K+   I   L+ +
Sbjct: 670 GCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEK 729

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M      PN   +  ++ GLC+   +  A   +  +         +++N ++    KLG 
Sbjct: 730 MAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGM 789

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
            GEAV L   ++E      + ++  LI G  +      A  +  ++   G     V +  
Sbjct: 790 FGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKV 849

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            ++   + G + +   LL  ME         TY+++++ L
Sbjct: 850 LIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQEL 889


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 185/609 (30%), Positives = 289/609 (47%), Gaps = 31/609 (5%)

Query: 13  HDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLY-------DDIKVSETPRNVYT 65
           H A  +  +MK L LK ++ T N+L+  L        +Y       D IK+     N  T
Sbjct: 156 HHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLG-VKVNTNT 214

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            +I+I G C +++L +AI  + +       P  VS N I+   CK G    A+ L   M 
Sbjct: 215 FNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMK 274

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             GL P+  ++NIL+ G C  G ++EA +  + M ++ V PD  TY++L  G     +I 
Sbjct: 275 NNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKID 334

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A+++  ++      PD+VTY  LI G     +  +G +L + M  +G K N + Y+V++
Sbjct: 335 EAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVV 394

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
               K G++D A   L +ME  G  PD VT++ LI G CK  ++ +A ++ +EM  K + 
Sbjct: 395 KWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLK 454

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
            NS     IL  LC +  + +A     S        D V Y  +I GY K G   EA++L
Sbjct: 455 MNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKL 514

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           + ++ EK I PSI+T+N++I G C +GK   +   L+ +   GL P   TY T +  YC 
Sbjct: 515 WDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCR 574

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           EG +++      +M  K+  P   T  ++++GLC +  L +A++L       G   D +T
Sbjct: 575 EGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVT 634

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV--- 542
           YNTII   CK     +AF LL +M    L P   TYN ++  L   G +K A+  +    
Sbjct: 635 YNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIV 694

Query: 543 ---SLQEHNISLTK-----------------VAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
               LQ+  ISL K                 V ++  I   C +G    AM    +  +K
Sbjct: 695 EQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQK 754

Query: 583 GFEISIRDY 591
           G  +    Y
Sbjct: 755 GITLHKSTY 763



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/585 (26%), Positives = 270/585 (46%), Gaps = 63/585 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y     V+ +  + + + +L +KV+  T+N L+Y      + ++ +  +      S  P 
Sbjct: 187 YPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPD 246

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV  N+I +D LC++ +L +A   L +       P+  + N ++S YCKLG+ + A  + 
Sbjct: 247 NVSYNTI-LDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVI 305

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA------ 175
            LM +  + PD ++YN+LI GLC  G ++EA    ++M    + PD +TY+ L       
Sbjct: 306 DLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDC 365

Query: 176 ----KGFHLLSQISGA--------------WKV-----------IQKLLIKGSDPDIVTY 206
               KGF L+ ++ G               W V           ++K+   G  PD VT+
Sbjct: 366 SSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTF 425

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             LI GYC+ G + E  ++ + M  +G K+N +  + +L ++C   ++D+A  LL     
Sbjct: 426 NTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASK 485

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G   D V+Y  LI G  K  K  +A++L++EM  K I P+   +  ++ GLC      +
Sbjct: 486 RGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQ 545

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           +    + L+ S  + D   YN +I GY + G + +A Q + ++++K   P + T N L+ 
Sbjct: 546 SIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLR 605

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G C  G +  A +L +T    G    AVTY T ++  C+E   +    LL EME K +GP
Sbjct: 606 GLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGP 665

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-----------------------VTPDQ 483
              TY  ++  L    +++EA + +  +   G                         P+ 
Sbjct: 666 DCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNS 725

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +T++  I   C     + A  ++ +     +    +TY  L++GL
Sbjct: 726 VTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGL 770



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 231/484 (47%), Gaps = 26/484 (5%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G + +A  VI  M + ++   + TYN L+  L      D  + L D+++  +   +
Sbjct: 292 YCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPD 351

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +I+G    S        + +  GK   P+ V+ N ++  Y K G  + A     
Sbjct: 352 VVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELR 411

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + G  PD  ++N LI+G C AG + EA    ++M R G++ +++T + +        
Sbjct: 412 KMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGER 471

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A+K++     +G   D V+Y  LI GY + G   E +KL + M  +    ++I Y+
Sbjct: 472 KLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYN 531

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++  +C SG+ D+++  L E+   GL PD  TY+ +I G C++ +V KA Q +N+M  K
Sbjct: 532 TMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKK 591

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P+ F    +L GLC + M+ +A   F++ I      D V YN +I G  K     EA
Sbjct: 592 SFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEA 651

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-------------- 408
             L  ++ EK++ P   T+N+++      G++ +A   +  I   G              
Sbjct: 652 FDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKI 711

Query: 409 ---------LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
                     +P++VT++  +N  C +G  +  + ++QE   K I     TY  +++GL 
Sbjct: 712 ESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLI 771

Query: 460 KQWK 463
           K+ K
Sbjct: 772 KRRK 775



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 238/514 (46%), Gaps = 18/514 (3%)

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW--KVIQKLLIK-GSDPDIVTYTV 208
           A +  N M R  ++P+ +T + L             +  K I   +IK G   +  T+ +
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNI 217

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI G C    + E + L   M       + ++Y+ +L  +CK G+++EA  LL +M+  G
Sbjct: 218 LIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNG 277

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           L P+  T++IL+ G CK   + +A Q+ + M    + P+ + +  ++ GLC+   I EA 
Sbjct: 278 LLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAF 337

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
              D +     + DVV YN +I+G     +  +  +L  ++  K + P+ VT+N ++  +
Sbjct: 338 RLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWY 397

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            K GK+ +A   L  ++  G  P  VT+ T +N YC+ G +     ++ EM  K +    
Sbjct: 398 VKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNS 457

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VT   ++  LC + KL +A +LL      G   D+++Y T+I  + K     +A +L ++
Sbjct: 458 VTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDE 517

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    + P+  TYN +I GLC +G    +   L  L E  +   +  Y TII  +C EG 
Sbjct: 518 MKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQ 577

Query: 569 VHKAMTFFCQMVEKGFE-------ISIR--------DYTKSFFCMMLSNGFPPDQEICEV 613
           V KA  F  +MV+K F+       I +R        D     F   +S G   D      
Sbjct: 578 VEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNT 637

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           ++    +       F+L A M +  L PD +  N
Sbjct: 638 IISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYN 671



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 185/449 (41%), Gaps = 88/449 (19%)

Query: 287 DKVHKAIQLYNEMCSKRISP--------------------------------------NS 308
           ++ H A Q++N M    + P                                      N+
Sbjct: 153 NRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNT 212

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID----------------- 351
                ++ G C +  ++EA      +   +C  D V YN ++D                 
Sbjct: 213 NTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLD 272

Query: 352 ------------------GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
                             GY KLG + EA Q+   + +  + P + T+N LI G CK+GK
Sbjct: 273 MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGK 332

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + +A RL D ++   L P  VTY T +N   +  +  +   L+ +ME K + P  VTY V
Sbjct: 333 IDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNV 392

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           V+K   K+ K+  A   L  M   G +PD +T+NT+I  +CK   L +AF+++++M    
Sbjct: 393 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG 452

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           L+  S T N ++  LC    L +A  LL S  +    + +V+Y T+I  +  +G   +AM
Sbjct: 453 LKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAM 512

Query: 574 TFFCQMVEKGFEISIRDYTKSF--FCM-------------MLSNGFPPDQEICEVMLIAF 618
             + +M EK    SI  Y       C              +L +G  PD+     +++ +
Sbjct: 513 KLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGY 572

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            + G +   F+    M+K    PD F  N
Sbjct: 573 CREGQVEKAFQFHNKMVKKSFKPDLFTCN 601



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 148/323 (45%), Gaps = 20/323 (6%)

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK---NGKVADARRL 400
           V+ +  I  YV       A Q++ ++    + P+++T N+LI    +      V  ++ +
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199

Query: 401 L-DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
             D IKL G++ +  T+   +   C E  +   + L+ +M+  +  P +V+Y  ++  LC
Sbjct: 200 FSDVIKL-GVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLC 258

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K+ KL EA  LL DM   G+ P++ T+N ++  +CK   L++A Q+++ M  +N+ P   
Sbjct: 259 KKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVW 318

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYN+LI GLC +G +  A  L   ++   +    V Y T+I          K      +M
Sbjct: 319 TYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKM 378

Query: 580 VEKG-------FEISIRDYTK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
             KG       + + ++ Y K        +    M  +GF PD      ++  + + G L
Sbjct: 379 EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRL 438

Query: 625 GSVFELAAVMIKSGLLPDKFLIN 647
              F +   M + GL  +   +N
Sbjct: 439 SEAFRMMDEMSRKGLKMNSVTLN 461


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 174/628 (27%), Positives = 301/628 (47%), Gaps = 59/628 (9%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +L++ +K  +   NV+  +++I GLC++ R++DA     E + +   P+ V+ N ++  Y
Sbjct: 87  ELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGY 146

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK G  +VA GL   M K  + P   ++N L+ GLC A  +EEA    N++  +G  PD 
Sbjct: 147 CKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDG 206

Query: 169 ITY------------------------------------SILAKGFHLLSQISGAWKVIQ 192
            TY                                    SIL  G     ++  A +V++
Sbjct: 207 FTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLK 266

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
            L+  G  P  V Y  ++ GYCQIG+++  +   E M S+G + N IA++ ++   C+  
Sbjct: 267 SLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQ 326

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            ID+A   + +M   G+ P + TY+ILI G  +     +  Q+  EM      PN  ++G
Sbjct: 327 MIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYG 386

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           +++  LC+   I EA M    ++    + +  +YN++IDG   +G + EA++ + ++ + 
Sbjct: 387 SLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKN 446

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            I  +IVT+NSLI G CK GK+ +A  +   I   G  P  +TY + ++ Y   GN Q+ 
Sbjct: 447 GIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKC 506

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQW-KLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
           L L + M+   + PT  T+  +I G  K+  KL+E   L  +M  + ++PD++ YN +I 
Sbjct: 507 LELYETMKKLGLKPTINTFHPLISGCSKEGIKLKET--LFNEMLQMNLSPDRVVYNAMIH 564

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            + +   ++KAF L  +M    + P + TYN LI G    G L     L+  ++   +  
Sbjct: 565 CYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIP 624

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEIC 611
               Y+ +I+ HC   D + A  ++ +M+E                    NGF P+  IC
Sbjct: 625 EADTYSLLIQGHCDLKDFNGAYVWYREMLE--------------------NGFLPNVCIC 664

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGL 639
             +     + G L     + + MI +G+
Sbjct: 665 NELSTGLRKDGRLQEAQSICSEMIANGM 692



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 258/543 (47%), Gaps = 15/543 (2%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  M+  G  PD   Y   +      G ++ A+E    M R  V P+   Y++L  G  
Sbjct: 53  LFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLC 112

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +I  A K+  ++ ++   P+ VT+  LI GYC+ G V+  + LRE M  +  + ++I
Sbjct: 113 KEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSII 172

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK-VHKAIQLYNE 298
            ++ LLS +CK+ RI+EA  +L E++  G  PD  TYSI+  GL K D     A+ LY E
Sbjct: 173 TFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYRE 232

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
              K +  +++    +L GLC++  + +A     SL+    +   V+YN +++GY ++G+
Sbjct: 233 AIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGD 292

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +  A+    Q+  + + P+ + FNS+I  FC+   +  A   +  +   G+ PS  TY  
Sbjct: 293 MDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNI 352

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++ Y       R   +L+EME     P  ++Y  +I  LCK  K+ EA  +L DM   G
Sbjct: 353 LIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRG 412

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           V P+   YN +I   C    LR+A +  ++M  + +  T  TYN LI GLC  G LK A+
Sbjct: 413 VLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAE 472

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY------- 591
            +   +         + Y ++I  +   G+  K +  +  M + G + +I  +       
Sbjct: 473 EMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGC 532

Query: 592 -------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                   ++ F  ML     PD+ +   M+  + + G +   F L   M+  G+ PD  
Sbjct: 533 SKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNK 592

Query: 645 LIN 647
             N
Sbjct: 593 TYN 595



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/631 (25%), Positives = 287/631 (45%), Gaps = 52/631 (8%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++++ L +  +  + +   +E  G  F P  +     M    KLG  ++A  LF  M + 
Sbjct: 36  MIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRR 95

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            + P+ F YN+LI GLC    + +A +   +M    + P+ +T++ L  G+    ++  A
Sbjct: 96  KVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVA 155

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG------------------------- 222
             + +++  +  +P I+T+  L+ G C+   +EE                          
Sbjct: 156 IGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDG 215

Query: 223 -----------LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
                      L L    + +G K++    S+LL+ +CK G++++A  +L  +   GL P
Sbjct: 216 LLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVP 275

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
             V Y+ ++ G C+   + +AI    +M S+ + PN  A  +++   CE +MI +A  + 
Sbjct: 276 GEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWV 335

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             ++       V  YNI+IDGY +L       Q+  ++ E    P+++++ SLI   CK+
Sbjct: 336 KKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKD 395

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           GK+ +A  +L  +   G+ P+A  Y   ++  C  G ++  L    EM    IG T VTY
Sbjct: 396 GKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTY 455

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             +IKGLCK  KL+EA ++   +   G  PD ITYN++I  +    + +K  +L   M  
Sbjct: 456 NSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKK 515

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             L+PT  T++ LI G C    +K  + L   + + N+S  +V Y  +I  +   G V K
Sbjct: 516 LGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQK 574

Query: 572 AMTFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLI 616
           A +   +MV+ G     + Y               TK     M + G  P+ +   +++ 
Sbjct: 575 AFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQ 634

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                 D    +     M+++G LP+  + N
Sbjct: 635 GHCDLKDFNGAYVWYREMLENGFLPNVCICN 665



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 158/536 (29%), Positives = 270/536 (50%), Gaps = 5/536 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G V  A+ +  +MK+  ++ SI T+NSLL  L   R  +    + ++IK +    +
Sbjct: 146 YCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPD 205

Query: 63  VYTNSIVIDGLCQQSRLQDAILFL-QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            +T SI+ DGL +      A L L +E  GK       + + +++  CK G  E A+ + 
Sbjct: 206 GFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVL 265

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ++++GL P    YN +++G C  G M+ A+     M   G+ P+ I ++ +   F  +
Sbjct: 266 KSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEM 325

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             I  A + ++K++ KG  P + TY +LI GY ++       ++ E M   G K NVI+Y
Sbjct: 326 QMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISY 385

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
             L++ +CK G+I EA  +L +M   G+ P+   Y++LI G C   K+ +A++ ++EM  
Sbjct: 386 GSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSK 445

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             I      + +++ GLC+   + EA   F  +  +    DV+ YN +I GY   GN  +
Sbjct: 446 NGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQK 505

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            ++LY  + +  + P+I TF+ LI G  K G +     L + +    L P  V Y   ++
Sbjct: 506 CLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIH 564

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            Y E G++Q+  +L +EM    + P + TY  +I G  K+ KL E   L++DM   G+ P
Sbjct: 565 CYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIP 624

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           +  TY+ +I+  C  KD   A+    +M  +   P     N L  GL  +G L+ A
Sbjct: 625 EADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEA 680



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 204/412 (49%), Gaps = 12/412 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRN 62
           Y + G +  A+  I +M+   L+ +   +NS++     ++  D   +    +       +
Sbjct: 287 YCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPS 346

Query: 63  VYTNSIVIDG---LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           V T +I+IDG   LC  SR    +  ++E   K   P+V+S  ++++  CK G    A+ 
Sbjct: 347 VETYNILIDGYGRLCVFSRCFQILEEMEENGEK---PNVISYGSLINCLCKDGKILEAEM 403

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   M+  G+ P+A  YN+LI G C  G + EAL F ++M ++G+    +TY+ L KG  
Sbjct: 404 VLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLC 463

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
            + ++  A ++   +   G  PD++TY  LI GY   GN ++ L+L E M   G K  + 
Sbjct: 464 KMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTIN 523

Query: 240 AYSVLLSSMCKSG-RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
            +  L+S   K G ++ E L    EM  + L PD V Y+ +I    +   V KA  L  E
Sbjct: 524 TFHPLISGCSKEGIKLKETL--FNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKE 581

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M    + P++  + +++LG  ++  ++E +   D +     I +   Y+++I G+  L +
Sbjct: 582 MVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKD 641

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
              A   YR+++E    P++   N L  G  K+G++ +A+ +   +  +G++
Sbjct: 642 FNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGMD 693



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 181/377 (48%), Gaps = 17/377 (4%)

Query: 283 LCKQDKVHKAI-QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           +C + K+H  + +LY+ M  +   P+      I+  L E +        F  ++      
Sbjct: 5   VCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRP 64

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D ++Y   +   VKLG++  A++L+  +  +++ P++  +N LI G CK  ++ DA +L 
Sbjct: 65  DKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLF 124

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             + +  L P+ VT+ T ++ YC+ G +   + L + M+ + + P+ +T+  ++ GLCK 
Sbjct: 125 GEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKA 184

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD-LRKAFQLLNQMWLHNLEPTSAT 520
            +++EA  +L ++   G  PD  TY+ I     K  D    A  L  +     ++  + T
Sbjct: 185 RRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYT 244

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
            +IL++GLC  G ++ A+ +L SL EH +   +V Y TI+  +C  GD+ +A+    QM 
Sbjct: 245 CSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQME 304

Query: 581 EKGF---------------EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
            +G                E+ + D  + +   M+  G  P  E   +++  + +     
Sbjct: 305 SRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFS 364

Query: 626 SVFELAAVMIKSGLLPD 642
             F++   M ++G  P+
Sbjct: 365 RCFQILEEMEENGEKPN 381



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 165/351 (47%), Gaps = 2/351 (0%)

Query: 244 LLSSMCKSGRIDEALGLLYE-MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L S+C   ++   +  LY+ M   G  P      +++  L +  K    + L+ EM   
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P+   +G  +L   +   +  A   F+++     + +V +YN++I G  K   I +A
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +L+ ++  + + P+ VTFN+LI G+CK G+V  A  L + +K   +EPS +T+ + ++ 
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK-LQEAVQLLEDMYVIGVTP 481
            C+   I+    +L E++     P   TY+++  GL K       A+ L  +    GV  
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D  T + ++   CK   + KA ++L  +  H L P    YN +++G C  GD+  A   +
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             ++   +    +A+ ++I   C    + KA  +  +MV KG   S+  Y 
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYN 351


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 158/536 (29%), Positives = 271/536 (50%), Gaps = 15/536 (2%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +M K  L P+  + + L+HGL        A+E  +DM   G+ PD   Y+ + +    L 
Sbjct: 182 MMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELK 241

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +S A ++I ++   G D +IV Y VLI G C+   V E + +++ +  +  K +V+ Y 
Sbjct: 242 DLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYC 301

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +CK    +  L ++ EM  +   P     S L+ GL K+ KV +A+ L   +   
Sbjct: 302 TLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEF 361

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +SPN F + A++  LC+     EA + FD +       + V Y+I+ID + + G +  A
Sbjct: 362 GVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTA 421

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +    ++I+  + PS+  +NSLI G CK G ++ A  L+  +    LEP+ VTYT+ M  
Sbjct: 422 LSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGG 481

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC +G I + L L  EM  K I P+  T+T ++ GL +   +++AV+L  +M    V P+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPN 541

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           ++TYN +I  +C+  ++ KAF+ LN+M    + P + +Y  LI GLC+ G    A   + 
Sbjct: 542 RVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI-----------SIRDY 591
            L + N  L ++ YT ++   C EG + +A++    M  +G ++           S++  
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHK 661

Query: 592 TKSFFCMML----SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
            +  F  +L      G  PD  I   M+ A  + GD    F +  +MI  G +P++
Sbjct: 662 DRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717



 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 189/696 (27%), Positives = 323/696 (46%), Gaps = 54/696 (7%)

Query: 6   YSRTGMVHDAVFVIAKM-KELDLKVSIQTYNSLLYNL---RHTDIMWDLYDD-IKVSETP 60
           Y R+  V D V V   M  ++ L   ++T ++LL+ L   RH  +  +L+DD I V   P
Sbjct: 166 YVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRP 225

Query: 61  R----------------------------------NVYTNSIVIDGLCQQSRLQDAILFL 86
                                              N+   +++IDGLC++ ++ +A+   
Sbjct: 226 DVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIK 285

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           ++ AGKE  P VV+   ++   CK+   EV   +   ML+    P   + + L+ GL   
Sbjct: 286 KDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKR 345

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G +EEAL     +   GV P+   Y+ L            A  +  ++   G  P+ VTY
Sbjct: 346 GKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTY 405

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           ++LI  +C+ G ++  L     M+  G K +V  Y+ L++  CK G I  A  L+ EM  
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMIN 465

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
             L+P +VTY+ L+ G C + K++KA++LY+EM  K I P+ +    +L GL    +I +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRD 525

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A   F  +   N   + V YN+MI+GY + GN+ +A +   ++IEK I P   ++  LI+
Sbjct: 526 AVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIH 585

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G C  G+ ++A+  +D +     E + + YT  ++ +C EG ++  L++ Q+M  + +  
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDL 645

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             V Y V+I G  K    +  + LL++M+  G+ PD + Y ++I +  K  D ++AF + 
Sbjct: 646 DLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC-A 565
           + M      P   TY  +I+GLC  G +  A+ L   ++  N    +V Y   +      
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKG 765

Query: 566 EGDVHKAM-------------TFFCQMVEKGFEISIR-DYTKSFFCMMLSNGFPPDQEIC 611
            GD+ KA+             T    M+ +GF    R +        M+ +G  PD    
Sbjct: 766 VGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITY 825

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             M+    +  D+    EL   M + G+ PD+   N
Sbjct: 826 TTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861



 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 181/664 (27%), Positives = 309/664 (46%), Gaps = 60/664 (9%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLC 74
           +I +M+     V+I  YN L+  L     +W+   +  D+   E   +V T   ++ GLC
Sbjct: 249 MIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLC 308

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +    +  +  + E     F PS  ++++++    K G  E A  L   + ++G+ P+ F
Sbjct: 309 KVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIF 368

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI--------------------- 173
            YN LI  LC   + +EA    + MG+ G+ P+ +TYSI                     
Sbjct: 369 VYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEM 428

Query: 174 --------------LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
                         L  G      IS A  ++ +++ K  +P +VTYT L+ GYC  G +
Sbjct: 429 IDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            + L+L   M  +G   ++  ++ LLS + ++G I +A+ L  EM    +KP+ VTY+++
Sbjct: 489 NKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVM 548

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I G C++  + KA +  NEM  K I P+++++  ++ GLC     +EA+++ D L   NC
Sbjct: 549 IEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             + + Y  ++ G+ + G + EA+ + + +  + +   +V +  LI G  K+        
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLG 668

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           LL  +   GL+P  V YT+ ++A  + G+ +    +   M  +   P  VTYT VI GLC
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK-CKDLRKAFQLLNQMWLHNLEPTS 518
           K   + EA  L   M      P+Q+TY   +    K   D++KA +L N + L  L   +
Sbjct: 729 KAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAI-LKGLLANT 787

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
           ATYN+LI G C  G ++ A  L+  +    +S   + YTT+I   C   DV KA+  +  
Sbjct: 788 ATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNS 847

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
           M EKG                      PD+     ++      G++G   EL   M++ G
Sbjct: 848 MTEKGIR--------------------PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887

Query: 639 LLPD 642
           L P+
Sbjct: 888 LKPN 891



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 246/490 (50%), Gaps = 5/490 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY-NLRHTDI--MWDLYDDIKVSETPR 61
           ++ R G +  A+  + +M ++ LK S+  YNSL+  + +  DI     L  ++   +   
Sbjct: 411 MFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEP 470

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V T + ++ G C + ++  A+    E  GK   PS+ +   ++S   + G    A  LF
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLF 530

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M ++ + P+  +YN++I G C  G+M +A EF N+M   G+ PD  +Y  L  G  L 
Sbjct: 531 TEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLT 590

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            Q S A   +  L     + + + YT L+ G+C+ G +EE L + + M  +G  L+++ Y
Sbjct: 591 GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCY 650

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            VL+    K       LGLL EM   GLKPD V Y+ +I    K     +A  +++ M +
Sbjct: 651 GVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK-LGNIG 360
           +   PN   + A++ GLC+   + EA +    +   N + + V Y   +D   K +G++ 
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMK 770

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +AV+L+  ++ K +  +  T+N LI GFC+ G++ +A  L+  +   G+ P  +TYTT +
Sbjct: 771 KAVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMI 829

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C   ++++ + L   M  K I P  V Y  +I G C   ++ +A +L  +M   G+ 
Sbjct: 830 SELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLK 889

Query: 481 PDQITYNTII 490
           P+  T  T I
Sbjct: 890 PNTETSETTI 899



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 260/558 (46%), Gaps = 42/558 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDI-KVSETPRNV 63
           + G V +A+ ++ ++ E  +  +I  YN+L+ +L   R+ D    L+D + K+   P +V
Sbjct: 344 KRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDV 403

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T SI+ID  C++ +L  A+ FL E       PSV   N++++ +CK G    A+ L   
Sbjct: 404 -TYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAE 462

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+   L P   +Y  L+ G C  G + +AL   ++M   G+ P   T++ L  G      
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGL 522

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF--------- 234
           I  A K+  ++      P+ VTY V+I GYC+ GN+ +  +    M+ +G          
Sbjct: 523 IRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRP 582

Query: 235 --------------------------KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
                                     +LN I Y+ LL   C+ G+++EAL +  +M   G
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRG 642

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           +  DLV Y +LI G  K       + L  EM  + + P+   + +++    +     EA 
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             +D +I   C+ + V Y  +I+G  K G + EA  L  ++      P+ VT+   +   
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDIL 762

Query: 389 CKN-GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            K  G +  A  L + I L GL  +  TY   +  +C +G ++    L+  M    + P 
Sbjct: 763 TKGVGDMKKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPD 821

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            +TYT +I  LC++  +++A++L   M   G+ PD++ YNT+I   C   ++ KA +L N
Sbjct: 822 CITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRN 881

Query: 508 QMWLHNLEPTSATYNILI 525
           +M    L+P + T    I
Sbjct: 882 EMLRQGLKPNTETSETTI 899



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 211/483 (43%), Gaps = 68/483 (14%)

Query: 230 LSQGFKLNVIAYSVLLSSMC--------------------KSGRIDEALGLLYE------ 263
           L +GF  +  ++ +L+ ++                     K   + +AL   YE      
Sbjct: 96  LHRGFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALKPSEVFDALFSCYEKCKLSS 155

Query: 264 ---------------------------MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
                                      M  V L P++ T S L+ GL K      A++L+
Sbjct: 156 SSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELF 215

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           ++M +  I P+ + +  ++  LCE + ++ A+     +  + C  ++V YN++IDG  K 
Sbjct: 216 DDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKK 275

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             + EAV + + L  K + P +VT+ +L+ G CK  +      ++D +      PS    
Sbjct: 276 QKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAV 335

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           ++ +    + G ++  L L++ +    + P    Y  +I  LCK     EA  L + M  
Sbjct: 336 SSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGK 395

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
           IG+ P+ +TY+ +I  FC+   L  A   L +M    L+P+   YN LI+G C  GD+  
Sbjct: 396 IGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISA 455

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--- 593
           A+ L+  +    +  T V YT+++  +C++G ++KA+  + +M  KG   SI  +T    
Sbjct: 456 AESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLS 515

Query: 594 ------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                         F  M      P++    VM+  + + G++   FE    MI+ G++P
Sbjct: 516 GLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVP 575

Query: 642 DKF 644
           D +
Sbjct: 576 DTY 578



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 93/202 (46%), Gaps = 5/202 (2%)

Query: 47  MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMS 106
           +WDL   I     P  V T + VI+GLC+   + +A +   +       P+ V+    + 
Sbjct: 704 IWDLM--INEGCVPNEV-TYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLD 760

Query: 107 RYCK-LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE 165
              K +G  + A  L   +LK GL  +  +YN+LI G C  G MEEA E    M   GV 
Sbjct: 761 ILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVS 819

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           PD ITY+ +       + +  A ++   +  KG  PD V Y  LI G C  G + +  +L
Sbjct: 820 PDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879

Query: 226 REVMLSQGFKLNVIAYSVLLSS 247
           R  ML QG K N       +S+
Sbjct: 880 RNEMLRQGLKPNTETSETTISN 901


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 155/556 (27%), Positives = 276/556 (49%), Gaps = 20/556 (3%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
            ++  C+      A   L E   +  G + V+ N +++  C+ G  E A G    M  YG
Sbjct: 228 ALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 287

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           L PD F+Y  LI+GLC +    EA    ++M    ++P+ + Y+ L  GF        A+
Sbjct: 288 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 347

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           K+I++++  G  P+ +TY  L+ G C++G ++    L + M+    + + I Y++++   
Sbjct: 348 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 407

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
            +     +A  LL EME  G+ P++ TYSI+I GLC+  +  KA  L  EM +K + PN+
Sbjct: 408 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 467

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F +  ++ G C +  ++ A   FD +   N + D+  YN +I G  K+G + E+ + + Q
Sbjct: 468 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 527

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + E+ + P+  T++ LI+G+ KNG +  A +L+  +   GL+P+ V Y   + +Y +  +
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 587

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           I+++ +  + M  + +   +  Y ++I  L     ++ A ++L  +   G  PD   Y++
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 647

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I   CK  D  KAF +L++M    ++P    YN LIDGLC +GD+  A  +  S+    
Sbjct: 648 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 707

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ 608
           +    V YT++I   C  GD+  A   + +                    ML+ G  PD 
Sbjct: 708 LVPNCVTYTSLIDGSCKVGDISNAFYLYNE--------------------MLATGITPDA 747

Query: 609 EICEVMLIAFHQGGDL 624
            +  V+       GDL
Sbjct: 748 FVYSVLTTGCSSAGDL 763



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 153/603 (25%), Positives = 274/603 (45%), Gaps = 4/603 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R+G V +A      M++  L     TY +L+  L   R ++    L D++  +E   NV 
Sbjct: 269 RSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV 328

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             + +IDG  ++    +A   ++E       P+ ++ + ++   CK+G  + A  L   M
Sbjct: 329 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 388

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++    PD  +YN++I G     S ++A    ++M   G+ P+  TYSI+  G     + 
Sbjct: 389 VRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEP 448

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +++++  KG  P+   Y  LI GYC+ GNV    ++ + M       ++  Y+ L
Sbjct: 449 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 508

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  + K GR++E+     +M+  GL P+  TYS LI G  K   +  A QL   M    +
Sbjct: 509 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 568

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   +  +L    + + I +    F S++    + D  +Y I+I      GN+  A +
Sbjct: 569 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 628

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +   + +    P +  ++SLI G CK      A  +LD +   G++P+ V Y   ++  C
Sbjct: 629 VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 688

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G+I     +   +  K + P  VTYT +I G CK   +  A  L  +M   G+TPD  
Sbjct: 689 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 748

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y+ +        DL +A  L+ +M+L     + +++N L+DG C  G ++    LL  +
Sbjct: 749 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVI 807

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
               +    +    II      G + +  T F ++ +K  E + R ++  F  M+     
Sbjct: 808 MGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKI 867

Query: 605 PPD 607
           P D
Sbjct: 868 PLD 870



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 162/571 (28%), Positives = 270/571 (47%), Gaps = 25/571 (4%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY-NLRH--TDIMWDLYDDIKVSETPRNVY 64
           + G +  A  ++ +M     +    TYN ++  + RH      + L  +++ +    NVY
Sbjct: 374 KMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVY 433

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T SI+I GLCQ    + A   L+E   K   P+      ++S YC+ G   +A  +F  M
Sbjct: 434 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 493

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K  + PD + YN LI GL   G +EE+ ++   M   G+ P+  TYS L  G+     +
Sbjct: 494 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDL 553

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +++Q++L  G  P+ V Y  L+  Y +  ++E+     + ML QG  L+   Y +L
Sbjct: 554 ESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGIL 613

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           + ++  SG ++ A  +L  +E  G  PD+  YS LI GLCK     KA  + +EM  K +
Sbjct: 614 IHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGV 673

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   + A++ GLC+   I+ AR  F+S++    + + V Y  +IDG  K+G+I  A  
Sbjct: 674 DPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFY 733

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           LY +++   I+P    ++ L  G    G +  A  L++ + L G   S  ++   ++ +C
Sbjct: 734 LYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFC 792

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA----------------- 467
           + G +Q  L LL  +  + + P  +T   +I GL +  KL E                  
Sbjct: 793 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAAR 852

Query: 468 --VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
               L  DM   G  P  +  + +IR  CK  +L KA  L + +   +     ++Y  ++
Sbjct: 853 HFSSLFMDMINQGKIPLDVV-DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIV 911

Query: 526 DGLCVNGDLKNADCLLVSLQEH-NISLTKVA 555
           D LC  G L  A  LL  + +  N+  T VA
Sbjct: 912 DNLCRKGKLSEALNLLKEMDKRGNLQPTLVA 942



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 166/665 (24%), Positives = 289/665 (43%), Gaps = 92/665 (13%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLY---DDIKVSETPRNVYTNSIVIDGLC 74
           V+ +M+E    ++  TYN L+  L  +  + + +    D++      + +T   +I+GLC
Sbjct: 244 VLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLC 303

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +  R  +A   L E +  E  P+VV    ++  + + G A+ A  +   M+  G+ P+  
Sbjct: 304 KSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKI 363

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +Y+ L+ GLC  G M+ A      M R    PD ITY+++ +G         A++++ ++
Sbjct: 364 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEM 423

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC----- 249
              G  P++ TY+++I G CQ G  E+   L E M ++G K N   Y+ L+S  C     
Sbjct: 424 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 483

Query: 250 ------------------------------KSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
                                         K GR++E+     +M+  GL P+  TYS L
Sbjct: 484 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 543

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I G  K   +  A QL   M    + PN   +  +L    + + I +    F S++    
Sbjct: 544 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 603

Query: 340 IQDVVLYNIMIDGYVKLGNIGEA---------------VQLYRQLI-------------- 370
           + D  +Y I+I      GN+  A               V +Y  LI              
Sbjct: 604 MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFG 663

Query: 371 ------EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
                 +K + P+IV +N+LI G CK+G ++ AR + ++I   GL P+ VTYT+ ++  C
Sbjct: 664 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 723

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G+I     L  EM    I P    Y+V+  G      L++A+ L+E+M++ G      
Sbjct: 724 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS- 782

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           ++N ++  FCK   +++  +LL+ +    L P + T   +I GL   G L     + V L
Sbjct: 783 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 842

Query: 545 QEHNISLTKVAYTTI------------------IKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           Q+         ++++                  I+ HC EG++ KA+     +V K   +
Sbjct: 843 QQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPM 902

Query: 587 SIRDY 591
               Y
Sbjct: 903 GCSSY 907



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 257/548 (46%), Gaps = 61/548 (11%)

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           ++ A+E +   GRHG   +A         +  + +   A KV+ ++  +G   + VTY V
Sbjct: 212 LQRAVEGSAARGRHGSALEA---------YCKVREFDTAKKVLVEMRERGCGLNTVTYNV 262

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI G C+ G VEE    ++ M   G   +   Y  L++ +CKS R +EA  LL EM    
Sbjct: 263 LIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAE 322

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           LKP++V Y+ LI G  ++    +A ++  EM +  + PN   +  ++ GLC+   +  A 
Sbjct: 323 LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRAS 382

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
           +    ++  +   D + YN++I+G+ +  +  +A +L  ++    ISP++ T++ +I+G 
Sbjct: 383 LLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGL 442

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C++G+   A  LL+ +   GL+P+A  Y   ++ YC EGN+     +  +M    + P  
Sbjct: 443 CQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDL 502

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
             Y  +I GL K  +++E+ +    M   G+ P++ TY+ +I  + K  DL  A QL+ +
Sbjct: 503 YCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQR 562

Query: 509 MWLHNLEPT--------------------SAT---------------YNILIDGLCVNGD 533
           M    L+P                     S+T               Y ILI  L  +G+
Sbjct: 563 MLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 622

Query: 534 LKNADCLLVSLQEHNISLTKV-AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR--- 589
           ++ A  +L  + E N S+  V  Y+++I   C   D  KA     +M +KG + +I    
Sbjct: 623 MEAAFRVLSGI-EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYN 681

Query: 590 ------------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
                        Y ++ F  +L+ G  P+      ++    + GD+ + F L   M+ +
Sbjct: 682 ALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT 741

Query: 638 GLLPDKFL 645
           G+ PD F+
Sbjct: 742 GITPDAFV 749



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 203/476 (42%), Gaps = 63/476 (13%)

Query: 3   AFVYS-------RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYD 52
           AFVY+       R G V  A  +  KM ++++   +  YNSL++ L     + +    + 
Sbjct: 467 AFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFA 526

Query: 53  DIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
            ++      N +T S +I G  +   L+ A   +Q        P+ V    ++  Y K  
Sbjct: 527 QMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSD 586

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
             E     F  ML  G+  D   Y ILIH L  +G+ME A    + + ++G  PD   YS
Sbjct: 587 DIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYS 646

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  G    +    A+ ++ ++  KG DP+IV Y  LI G C+ G++     +   +L++
Sbjct: 647 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 706

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL------------- 279
           G   N + Y+ L+   CK G I  A  L  EM A G+ PD   YS+L             
Sbjct: 707 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA 766

Query: 280 ---------------------IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
                                + G CK+ K+ + ++L + +  + + PN+     I+ GL
Sbjct: 767 MFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 826

Query: 319 CEKEMITE---------------ARMYFDSLIMSNCIQDVVLYNI---MIDGYVKLGNIG 360
            E   ++E               A  +F SL M    Q  +  ++   MI  + K GN+ 
Sbjct: 827 SEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLD 886

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-LEPSAVT 415
           +A+ L   ++ K       ++ +++   C+ GK+++A  LL  +   G L+P+ V 
Sbjct: 887 KALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVA 942


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 151/476 (31%), Positives = 253/476 (53%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  + +I++  LCQ  ++++A   L +   +   P VVS + I+  YC++        L 
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLM 310

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             + + GL P+ ++YN +I  LC  G + EA +    M    + PD + Y+ L  GF   
Sbjct: 311 EELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKS 370

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +S  +K+  ++  K   PD VTYT +I G CQ G V E  KL   MLS+G K + + Y
Sbjct: 371 GNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   CK+G + EA  L  +M   GL P++VTY+ L+ GLCK  +V  A +L +EM  
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K + PN   + A++ GLC+   I +A    + + ++    D + Y  ++D Y K+G + +
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAK 550

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +L R +++K + P+IVTFN L+ GFC +G + D  RL+  +   G+ P+A T+ + M 
Sbjct: 551 AHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMK 610

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC   N++  + + + M  + + P   TY ++IKG CK   ++EA  L ++M   G + 
Sbjct: 611 QYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSL 670

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
              +YN++I+ F K K   +A +L  +M  H        Y+I +D     G+ +N 
Sbjct: 671 TAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENT 726



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 163/569 (28%), Positives = 286/569 (50%), Gaps = 24/569 (4%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA-GSME 150
           K++G   +  +       + G    A  LF  +L YG+     S N+ +  L  +   + 
Sbjct: 175 KDWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIR 234

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI----KGSDPDIVTY 206
            A     +    GV  + ++Y+I+    HLL Q+ G  K    LLI    +G+ PD+V+Y
Sbjct: 235 TAFRVFREYSEVGVCWNTVSYNII---LHLLCQL-GKVKEAHSLLIQMEFRGNVPDVVSY 290

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           +V++ GYCQ+  + + LKL E +  +G K N   Y+ ++S +CK+GR+ EA  +L  M+ 
Sbjct: 291 SVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKN 350

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
             + PD V Y+ LI G  K   V    +L++EM  K+I P+   + +++ GLC+   + E
Sbjct: 351 QRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVE 410

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           AR  F  ++      D V Y  +IDGY K G + EA  L+ Q++EK ++P++VT+ +L+ 
Sbjct: 411 ARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVD 470

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G CK G+V  A  LL  +   GL+P+  TY   +N  C+ GNI++ + L++EM+     P
Sbjct: 471 GLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFP 530

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             +TYT ++   CK  ++ +A +LL  M   G+ P  +T+N ++  FC    L    +L+
Sbjct: 531 DTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLI 590

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
             M    + P + T+N L+   C+  +++    +   +    +      Y  +IK HC  
Sbjct: 591 KWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKA 650

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEIC 611
            ++ +A     +MVEKGF ++   Y                +  F  M ++GF  ++EI 
Sbjct: 651 RNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIY 710

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           ++ +   ++ G+  +  EL    I+  L+
Sbjct: 711 DIFVDVNYEEGNWENTLELCDEAIEKCLV 739



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 216/428 (50%), Gaps = 8/428 (1%)

Query: 18  VIAKMKELD---LKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIV----I 70
           V+  M+EL    LK +  TYNS++  L  T  + +    ++V +  R ++ +++V    I
Sbjct: 306 VLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR-IFPDNVVYTTLI 364

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
            G  +   +        E   K+  P  V+  +++   C+ G    A+ LF  ML  GL 
Sbjct: 365 SGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLK 424

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD  +Y  LI G C AG M+EA    N M   G+ P+ +TY+ L  G     ++  A ++
Sbjct: 425 PDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANEL 484

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           + ++  KG  P++ TY  LI G C++GN+E+ +KL E M   GF  + I Y+ ++ + CK
Sbjct: 485 LHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCK 544

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G + +A  LL  M   GL+P +VT+++L+ G C    +    +L   M  K I PN+  
Sbjct: 545 MGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATT 604

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
             +++   C +  +      +  +     + D   YNI+I G+ K  N+ EA  L+++++
Sbjct: 605 FNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMV 664

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           EK  S +  ++NSLI GF K  K  +AR+L + ++ HG       Y  F++   EEGN +
Sbjct: 665 EKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWE 724

Query: 431 RLLALLQE 438
             L L  E
Sbjct: 725 NTLELCDE 732



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 140/300 (46%), Gaps = 21/300 (7%)

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN-GKVADARRLLD 402
           +++++     V+ G + EA +L+ +L+   +  S+ + N  +     +   +  A R+  
Sbjct: 182 LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFR 241

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
                G+  + V+Y   ++  C+ G ++   +LL +ME +   P  V+Y+V++ G C+  
Sbjct: 242 EYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVE 301

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           +L + ++L+E++   G+ P+Q TYN+II   CK   + +A Q+L  M    + P +  Y 
Sbjct: 302 QLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYT 361

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            LI G   +G++     L   ++   I    V YT++I   C  G V +A   F +M   
Sbjct: 362 TLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM--- 418

Query: 583 GFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                            LS G  PD+     ++  + + G++   F L   M++ GL P+
Sbjct: 419 -----------------LSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPN 461



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 9/156 (5%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLY------NLRHTDIMWDLYDDIKVSETPRN 62
           +GM+ D   +I  M +  +  +  T+NSL+       N+R T    ++Y  +       +
Sbjct: 580 SGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRAT---IEIYKGMHAQGVVPD 636

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T +I+I G C+   +++A    +E   K F  +  S N+++  + K    E A+ LF 
Sbjct: 637 TNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFE 696

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
            M  +G   +   Y+I +      G+ E  LE  ++
Sbjct: 697 EMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDE 732


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 177/644 (27%), Positives = 295/644 (45%), Gaps = 82/644 (12%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIV- 69
           D + V+  M +  +   I+T + +L  L   R   +   L+D+I  S    +VY  + V 
Sbjct: 163 DGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVV 222

Query: 70  ----------------------------------IDGLCQQSRLQDAILFLQETAGKEFG 95
                                             I GLC+  R+ +A+      + K   
Sbjct: 223 RSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLR 282

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
             V +   ++   CK+   E  + +   M+++G  P   + + L+ GL   G++  A + 
Sbjct: 283 ADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDL 342

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            N + + GV P    Y+ L        ++  A  +   +  KG  P+ VTY++LI  +C+
Sbjct: 343 VNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCK 402

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G ++  L     M   G K  V  YS L+S  CK G++  A  L  EM A GLKP++V 
Sbjct: 403 RGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVI 462

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G CK+ ++H A +LY+EM  K ISPN++   A++ GLC    + EA   F  ++
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
             N I + V YN++I+G+ K GN   A +L  +++EK + P   T+  LI G C  G+V+
Sbjct: 523 EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVS 582

Query: 396 DARRLLDTIK--------LHGLEPSAVTYTTFMNAYCE---------------------- 425
           +AR  ++ ++        + G  P+ VTYT  +N  C+                      
Sbjct: 583 EAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 642

Query: 426 -------------EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
                        EGNI++ +  L ++  +      VTY ++I+G CK  ++QEA ++L 
Sbjct: 643 QNTYACFLDYLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLV 701

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +M   G++PD I+Y+TII  +C+  DL++A +L   M    + P +  YN LI G CV G
Sbjct: 702 NMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTG 761

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           +L  A  L   +    +   +  Y ++I   C    V     +F
Sbjct: 762 ELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 167/613 (27%), Positives = 278/613 (45%), Gaps = 34/613 (5%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T S V++GL +  + + A+    E       P V    A++   C+L     A+ +  
Sbjct: 180 IRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIG 239

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G      +YN+ I GLC    + EA+E  N +   G+  D  TY  L  G   + 
Sbjct: 240 RMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVE 299

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +     +++ +++  G  P     + L+ G  + GN+     L   +   G   ++  Y+
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++SMCK G++DEA  L   M   GL P+ VTYSILI   CK+ K+  A+    +M   
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I    + + +++ G C+   +  A+  FD +I +    +VV+Y  +I GY K G +  A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +LY ++  K ISP+  TF +LI G C   ++A+A +L   +    + P+ VTY   +  
Sbjct: 480 FRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY------- 475
           +C+EGN  R   LL EM  K + P   TY  +I GLC   ++ EA + + D+        
Sbjct: 540 HCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLN 599

Query: 476 -VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
            + G  P+ +TY  +I   CK   + KA  L  +M   N  P   TY   +D L   G++
Sbjct: 600 EIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNI 659

Query: 535 KNADCLLVSLQEHNISL-----TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG------ 583
           + A      +Q H++ L       V Y  +I+  C  G + +A      M++ G      
Sbjct: 660 EKA------IQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 713

Query: 584 -FEISIRDYTK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
            +   I +Y +          +  ML+ G  PD      ++      G+L   FEL   M
Sbjct: 714 SYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDM 773

Query: 635 IKSGLLPDKFLIN 647
           ++ G+ P++   N
Sbjct: 774 MRRGVKPNRATYN 786



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 147/543 (27%), Positives = 255/543 (46%), Gaps = 24/543 (4%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           LM+  G+ P   + + +++GL        AL   +++   G+ PD   Y+ + +    L 
Sbjct: 170 LMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELK 229

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               A +VI ++   G D  + TY V I G C+   V E ++++ ++  +G + +V  Y 
Sbjct: 230 DFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYC 289

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +CK    +    ++ EM   G  P     S L+ GL K+  +  A  L N++   
Sbjct: 290 TLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKF 349

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            ++P+ F + A++  +C+   + EA   F+++       + V Y+I+ID + K G +  A
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +    ++ E  I  ++  ++SLI G CK GK+  A+ L D +  +GL+P+ V YT+ ++ 
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC+EG +     L  EM  K I P   T+T +I GLC   ++ EA +L  +M    V P+
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           ++TYN +I   CK  +  +AF+LL++M    L P + TY  LI GLC  G +  A   + 
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMN 589

Query: 543 SLQEHNISLTK--------VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
            LQ     L +        V YT +I   C  G + KA    C+ +     +  ++    
Sbjct: 590 DLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKA-ELLCREMLASNSLPNQNTYAC 648

Query: 595 FFCMMLS---------------NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
           F   + S                GF  +     +++  F + G +    E+   MI SG+
Sbjct: 649 FLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGI 708

Query: 640 LPD 642
            PD
Sbjct: 709 SPD 711



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 154/602 (25%), Positives = 271/602 (45%), Gaps = 22/602 (3%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++I    Q  R  D ++ ++        P + +L+ +++   ++    +A  LF  ++  
Sbjct: 150 LLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSS 209

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           GL PD + Y  ++  LC       A E    M   G +    TY++  +G     ++  A
Sbjct: 210 GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEA 269

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++   L  KG   D+ TY  L+ G C++   E G ++   M+  GF  +  A S L+  
Sbjct: 270 VEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           + K G I  A  L+ +++  G+ P L  Y+ LI  +CK  K+ +A  L+N M  K + PN
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  ++   C++  +  A  +   +        V  Y+ +I G+ KLG +  A  L+ 
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFD 449

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++I   + P++V + SLI G+CK G++ +A RL   +   G+ P+  T+T  ++  C   
Sbjct: 450 EMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHAN 509

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            +     L  EM    + P  VTY V+I+G CK+     A +LL++M   G+ PD  TY 
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYR 569

Query: 488 TIIRSFCKCKDLRKAFQLLN-----QMWLHNLE---PTSATYNILIDGLCVNGDLKNADC 539
            +I   C    + +A + +N     Q  L+ +E   P   TY  LI+GLC  G +  A+ 
Sbjct: 570 PLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAEL 629

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK------GFEISIRDYTK 593
           L   +   N    +  Y   +    +EG++ KA+     ++E        + I IR + K
Sbjct: 630 LCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCK 689

Query: 594 --------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                        M+ +G  PD      ++  + + GDL    +L   M+  G+ PD   
Sbjct: 690 LGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVA 749

Query: 646 IN 647
            N
Sbjct: 750 YN 751



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 233/463 (50%), Gaps = 12/463 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G +  A  ++ K+K+  +  S+  YN+L+ ++      D    L++++       N  
Sbjct: 332 KKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDV 391

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T SI+ID  C++ +L  A+ FL +        +V   ++++S +CKLG    AK LF  M
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  GL P+   Y  LI G C  G +  A    ++M   G+ P+  T++ L  G    +++
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A K+  +++     P+ VTY VLI G+C+ GN     +L + M+ +G   +   Y  L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571

Query: 245 LSSMCKSGRIDEALGLLYEM--------EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +S +C +GR+ EA   + ++        E  G  P++VTY+ LI GLCK   + KA  L 
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLC 631

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM +    PN   +   L  L  +  I +A    D +++   + + V YNI+I G+ KL
Sbjct: 632 REMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHD-VLLEGFLANTVTYNILIRGFCKL 690

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G I EA ++   +I+  ISP  ++++++IY +C+ G + +A +L +++   G+ P  V Y
Sbjct: 691 GRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAY 750

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
              +   C  G + +   L  +M  + + P   TY  +I G C
Sbjct: 751 NFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 195/422 (46%), Gaps = 15/422 (3%)

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + + +L+ +  ++ R  + L ++  M   G+ P + T S ++ GL +  +   A+ L++
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           E+ S  + P+ + + A++  LCE +    AR     +  S C   V  YN+ I G  K  
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EAV++   L  K +   + T+ +L+ G CK  +      +++ +   G  PS    +
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVS 324

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++   ++GNI     L+ +++   + P+   Y  +I  +CK  KL EA  L  +M   
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ P+ +TY+ +I SFCK   L  A   L +M    ++ T   Y+ LI G C  G L+ A
Sbjct: 385 GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAA 444

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT----- 592
             L   +  + +    V YT++I  +C EG++H A   + +M  KG   +   +T     
Sbjct: 445 KSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISG 504

Query: 593 ----------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                        F  M+     P++    V++    + G+    FEL   M++ GL+PD
Sbjct: 505 LCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPD 564

Query: 643 KF 644
            +
Sbjct: 565 TY 566



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 157/305 (51%), Gaps = 17/305 (5%)

Query: 9   TGMVH-----DAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETP 60
           +G+ H     +A  +  +M E ++  +  TYN L+       +T   ++L D++      
Sbjct: 503 SGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV 562

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--------PSVVSLNAIMSRYCKLG 112
            + YT   +I GLC   R+ +A  F+ +  G++          P+VV+  A+++  CK+G
Sbjct: 563 PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIG 622

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
             + A+ L   ML     P+  +Y   +  L   G++E+A++  +D+   G   + +TY+
Sbjct: 623 LMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYN 681

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
           IL +GF  L +I  A +V+  ++  G  PD ++Y+ +I  YC+ G+++E +KL E ML++
Sbjct: 682 ILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNR 741

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   + +AY+ L+   C +G + +A  L  +M   G+KP+  TY+ LI G C    V   
Sbjct: 742 GVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSST 801

Query: 293 IQLYN 297
              ++
Sbjct: 802 ADYFS 806


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 161/550 (29%), Positives = 285/550 (51%), Gaps = 3/550 (0%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVI 70
           DA+ + +KM++L +  ++ TYN++++ L  +   D  +   + +   +   ++ T S+ I
Sbjct: 274 DAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFI 333

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +GL +  ++ +A   L+E +   F P+ V  N ++  YCK+G    A  +   ML  G+ 
Sbjct: 334 NGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGIS 393

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P++ + N LI G C +  + +A     +M   G+  +  ++S++     L  +   A   
Sbjct: 394 PNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHF 453

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           I+++L++   P+    T L+ G C+ G   E ++L   +L +GF  N++  + L+  +CK
Sbjct: 454 IREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCK 513

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           +G + E L LL +M   GL  D +TY+ LI G CK+ KV +  +L  EM  K I P+ + 
Sbjct: 514 AGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYT 573

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
              +L GLC  + I EA   +     +  + +V  Y +MIDGY K   + E   L  +L+
Sbjct: 574 FNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELV 633

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            K++  + V +NSLI  +C NG +  A RL D +K  G+  S  TY++ M+  C  G + 
Sbjct: 634 SKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVD 693

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               LL EM  + + P  V YT +I G  K  ++ +   +L++M    + P++ TY  +I
Sbjct: 694 DAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMI 753

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             FCK    ++A +LLN+M    + P + TYN   +GLC  G ++ A  +   +    + 
Sbjct: 754 DGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVC 813

Query: 551 LTKVAYTTII 560
           L ++ YTT+I
Sbjct: 814 LDEITYTTLI 823



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 163/552 (29%), Positives = 273/552 (49%), Gaps = 20/552 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V   + +++ +CK    + A GLF  M K G+ P+  +YN +IHGLC +G ++EA  F
Sbjct: 254 PDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRF 313

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M +  V P  ITYS+   G   L +I  A  V++++   G  P+ V Y  LI GYC+
Sbjct: 314 KEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCK 373

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +GN+ E LK+R+ MLS+G   N +  + L+   CKS +I +A  +L EM   GL  +  +
Sbjct: 374 MGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGS 433

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           +S++I  LC + +   A+    EM  + + PN      ++ GLC+     EA   +  L+
Sbjct: 434 FSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLL 493

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
               + ++V  N +I G  K GN+ E ++L R ++E+ +    +T+N+LI G CK GKV 
Sbjct: 494 GKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVK 553

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +   L + +   G++P   T+   ++  C    I     L  E +     P   TY V+I
Sbjct: 554 EGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMI 613

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G CK  K++E   LL ++    +  + + YN++IR++C   ++  AF+L + M    + 
Sbjct: 614 DGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVL 673

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
            + ATY+ L+ GLC  G + +A  LL  +++  +    V YTTII  +   G ++K    
Sbjct: 674 LSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIV 733

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
             +M                     S+   P++    +M+  F + G      +L   M 
Sbjct: 734 LQEMS--------------------SHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMT 773

Query: 636 KSGLLPDKFLIN 647
           + G+LPD    N
Sbjct: 774 EKGILPDAVTYN 785



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 238/459 (51%), Gaps = 4/459 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRN 62
           Y + G + +A+ +   M    +  +  T NSL+     +D +    ++ +++     P N
Sbjct: 371 YCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPIN 430

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             + S+VI+ LC + R   A+ F++E   +   P+   L  ++S  CK G    A  L+C
Sbjct: 431 QGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWC 490

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +L  G  P+  + N LIHGLC AG+M+E L+   DM   G+  D ITY+ L  G     
Sbjct: 491 RLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEG 550

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++   +++ ++++ KG  PDI T+ +L+ G C    ++E  +L       G+  NV  Y 
Sbjct: 551 KVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYG 610

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           V++   CK+ +++E   LL E+ +  L+ + V Y+ LIR  C    ++ A +L ++M S+
Sbjct: 611 VMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSR 670

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +  +   + +++ GLC   ++ +A+   D +     + +VV Y  +I GY KLG + + 
Sbjct: 671 GVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKV 730

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             + +++    I P+  T+  +I GFCK GK  +A +LL+ +   G+ P AVTY  F N 
Sbjct: 731 NIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNG 790

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
            C+EG ++    +  EM + A+    +TYT +I G C Q
Sbjct: 791 LCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG-CHQ 828



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 211/436 (48%), Gaps = 35/436 (8%)

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  V   L  KG  P + T T L+    +   +++  ++ + +   G   +V  +S +++
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           + CK  R D+A+GL  +ME +G+ P++VTY+ +I GLCK  ++ +A +   +M  +++SP
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +   + GL + E I EA      +     + + V+YN +IDGY K+GNI EA+++ 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD------------------------ 402
             ++ K ISP+ VT NSLI GFCK+ ++  A  +L+                        
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLK 444

Query: 403 -----------TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
                       + L  L P+    TT ++  C+ G     + L   +  K   P  VT 
Sbjct: 445 FRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTS 504

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             +I GLCK   +QE ++LL DM   G+  D+ITYNT+I   CK   +++ F+L  +M  
Sbjct: 505 NALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVK 564

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             ++P   T+N+L+ GLC    +  A  L    +++        Y  +I  +C    V +
Sbjct: 565 KGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEE 624

Query: 572 AMTFFCQMVEKGFEIS 587
                 ++V K  E++
Sbjct: 625 GENLLNELVSKKLELN 640



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 15/298 (5%)

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           G A  ++  L +K + PS+ T   L+    K  ++  +  + D I L G+ P    ++T 
Sbjct: 203 GFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTM 262

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +NA+C+       + L  +ME   + P  VTY  +I GLCK  +L EA +  E M    V
Sbjct: 263 INAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKV 322

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +P  ITY+  I    K + + +A  +L +M      P    YN LIDG C  G++  A  
Sbjct: 323 SPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALK 382

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC 597
           +   +    IS   V   ++I+  C    + +A     +M+ +G  I+   ++   ++ C
Sbjct: 383 IRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLC 442

Query: 598 M-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +             ML     P+  +   ++    + G  G   EL   ++  G +P+
Sbjct: 443 LKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPN 500


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 170/644 (26%), Positives = 312/644 (48%), Gaps = 30/644 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRN 62
           Y R G V +AV V  +M   D + ++ +YN   S+L +  + D    +Y  ++      +
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VY+ +I +   C+ SR   A+  L   + +    +VV+   ++  + +  F      LF 
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML  G+     ++N L+  LC  G ++E  +  + + + GV P+  TY++  +G     
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++ GA +++  L+ +G  PD++TY  LI G C+    +E       M+++G + +   Y+
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++  CK G +  A  ++ +    G  PD  TY  LI GLC + + ++A+ L+NE   K
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I PN   +  ++ GL  + MI EA    + +     I +V  +NI+++G  K+G + +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L + +I K   P I TFN LI+G+    K+ +A  +LD +  +G++P   TY + +N 
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+    + ++   + M  K   P   T+ ++++ LC+  KL EA+ LLE+M    V PD
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMW-LHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
            +T+ T+I  FCK  DL  A+ L  +M   + +  ++ TYNI+I       ++  A+ L 
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
             + +  +      Y  ++   C  G+V+    F  +M+E GF  S+    +   C+ + 
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAV---MIKSGLLPD 642
           +                        V+E A +   M++ GL+P+
Sbjct: 686 D-----------------------RVYEAAGIIHRMVQKGLVPE 706



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 160/642 (24%), Positives = 305/642 (47%), Gaps = 26/642 (4%)

Query: 23  KELDLKVSIQTYNSLLYNLRH-------TDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQ 75
           KE+  K ++ TY S++  L +        +++ D+ +++  +     VY  ++   G  +
Sbjct: 32  KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVG-NHMLEGVYVGAMKNYG--R 88

Query: 76  QSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFS 135
           + ++Q+A+   +     +  P+V S NAIMS     G+ + A  ++  M   G+ PD +S
Sbjct: 89  KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYS 148

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           + I +   C       AL   N+M   G E + + Y  +  GF+  +  +  +++  K+L
Sbjct: 149 FTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKML 208

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
             G    + T+  L+   C+ G+V+E  KL + ++ +G   N+  Y++ +  +C+ G +D
Sbjct: 209 ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
            A+ ++  +   G KPD++TY+ LI GLCK  K  +A     +M ++ + P+S+ +  ++
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            G C+  M+  A       + +  + D   Y  +IDG    G    A+ L+ + + K I 
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+++ +N+LI G    G + +A +L + +   GL P   T+   +N  C+ G +     L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           ++ M +K   P   T+ ++I G   Q K++ A+++L+ M   GV PD  TYN+++   CK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
                   +    M      P   T+NIL++ LC    L  A  LL  ++  +++   V 
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVE--------KGFEISIRDYT--------KSFFCMM 599
           + T+I   C  GD+  A T F +M E          + I I  +T        +  F  M
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM 628

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           +     PD     +M+  F + G++   ++    M+++G +P
Sbjct: 629 VDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 237/479 (49%), Gaps = 15/479 (3%)

Query: 56  VSETPR-NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           + + P+ +V T + +I GLC+ S+ Q+A ++L +   +   P   + N +++ YCK G  
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           ++A+ +    +  G  PD F+Y  LI GLC  G    AL   N+    G++P+ I Y+ L
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
            KG      I  A ++  ++  KG  P++ T+ +L+ G C++G V +   L +VM+S+G+
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             ++  +++L+       +++ AL +L  M   G+ PD+ TY+ L+ GLCK  K    ++
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
            Y  M  K  +PN F    +L  LC    + EA    + +   +   D V +  +IDG+ 
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577

Query: 355 KLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           K G++  A  L+R++ E  ++S S  T+N +I+ F +   V  A +L   +    L P  
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            TY   ++ +C+ GN+      L EM      P+  T   VI  LC + ++ EA  ++  
Sbjct: 638 YTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHR 697

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA----TYNILIDGL 528
           M   G+ P+ +  NTI        D+ K      ++ L +L   S      Y +L DGL
Sbjct: 698 MVQKGLVPEAV--NTIC-------DVDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGL 747



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 228/502 (45%), Gaps = 26/502 (5%)

Query: 148 SMEEAL-EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           +MEE L +   ++G H +E     Y    K +    ++  A  V +++     +P + +Y
Sbjct: 58  AMEEVLVDMRENVGNHMLEG---VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSY 114

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             ++      G  ++  K+   M  +G   +V ++++ + S CK+ R   AL LL  M +
Sbjct: 115 NAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSS 174

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G + ++V Y  ++ G  +++   +  +L+ +M +  +S        +L  LC+K  + E
Sbjct: 175 QGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKE 234

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
                D +I    + ++  YN+ I G  + G +  AV++   LIE+   P ++T+N+LIY
Sbjct: 235 CEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIY 294

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G CKN K  +A   L  +   GLEP + TY T +  YC+ G +Q    ++ +       P
Sbjct: 295 GLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVP 354

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              TY  +I GLC + +   A+ L  +    G+ P+ I YNT+I+       + +A QL 
Sbjct: 355 DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLA 414

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           N+M    L P   T+NIL++GLC  G + +AD L                   +K   ++
Sbjct: 415 NEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL-------------------VKVMISK 455

Query: 567 GDVHKAMTFFCQMVEKGFEISIR-DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
           G      TF   ++  G+   ++ +       +ML NG  PD      +L    +     
Sbjct: 456 GYFPDIFTF--NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513

Query: 626 SVFELAAVMIKSGLLPDKFLIN 647
            V E    M++ G  P+ F  N
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFN 535



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 217/447 (48%), Gaps = 4/447 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD--LYDDIKVSET-PRNVY 64
           + G +  AV ++  + E   K  + TYN+L+Y L       +  +Y    V+E    + Y
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I G C+   +Q A   + +     F P   +  +++   C  G    A  LF   
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L  G+ P+   YN LI GL   G + EA +  N+M   G+ P+  T++IL  G   +  +
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           S A  +++ ++ KG  PDI T+ +LI GY     +E  L++ +VML  G   +V  Y+ L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L+ +CK+ + ++ +     M   G  P+L T++IL+  LC+  K+ +A+ L  EM +K +
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV-LYNIMIDGYVKLGNIGEAV 363
           +P++   G ++ G C+   +  A   F  +  +  +      YNI+I  + +  N+  A 
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L+++++++ + P   T+  ++ GFCK G V    + L  +  +G  PS  T    +N  
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVT 450
           C E  +     ++  M  K + P  V 
Sbjct: 683 CVEDRVYEAAGIIHRMVQKGLVPEAVN 709



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 157/357 (43%), Gaps = 46/357 (12%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP---RNV 63
           S  GM+ +A  +  +M E  L   +QT+N L+  L     + D    +KV  +     ++
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T +I+I G   Q ++++A+  L         P V + N++++  CK    E     +  
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M++ G  P+ F++NIL+  LC    ++EAL    +M    V PDA+T+  L  GF     
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 184 ISGAW------------------------------------KVIQKLLIKGSDPDIVTYT 207
           + GA+                                    K+ Q+++ +   PD  TY 
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +++ G+C+ GNV  G K    M+  GF  ++     +++ +C   R+ EA G+++ M   
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701

Query: 268 GLKPDLVTYSILIRGLCKQDKVH-KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           GL P+ V        +C  DK    A +L  E   K+     +A+  +  GL +K +
Sbjct: 702 GLVPEAVN------TICDVDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGLRDKRL 752


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 150/568 (26%), Positives = 277/568 (48%), Gaps = 20/568 (3%)

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           Q  +L++     Q    K    S+ + N ++    + G+ ++A  ++  +++ G+  + +
Sbjct: 199 QAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVY 258

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           + NI+++ LC     E  + F +DM   GV  D +TY+ L   +     +  A++++   
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             +G +P ++TY  ++ G C+IG  +    +   ML  G   N   Y+ LL  +C+   I
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            EA  +  EM   G+ PDLV++S LI  L +   +++A+  + EM    I P++  +  +
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G C    +++A    D ++   C  DVV YN  ++G  K     +A  L+ +++E+ +
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P   TF +LI G+CK+G +  A  L + +    L+P  VTY T ++ +C+ G + R   
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L  +M  K I P H++Y  V+ G C    L EA+ L + M   G+ P+ +T NT+I+ +C
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC 618

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           +  D+ KA++ L++M  + + P S +YN LIDG     +L+ A  L+  +++  +    +
Sbjct: 619 RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
            Y  I+   CAEG + +A     +M+E G                      PD      +
Sbjct: 679 TYNLILNGFCAEGKMQEAEQVLRKMIEIGIN--------------------PDGATYSSL 718

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +       ++   F     M++ GL+PD
Sbjct: 719 INGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 157/551 (28%), Positives = 284/551 (51%), Gaps = 17/551 (3%)

Query: 4   FVYSRTGMVHD---AVFVIAK-----------MKELDLKVSIQTYNSLLYNLRHT---DI 46
           F +   G+++D     +V AK           ++   + VSI   N LL  L  T   D+
Sbjct: 181 FYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDL 240

Query: 47  MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMS 106
            W++Y ++       NVYT +I+++ LC+  + ++ + FL +  GK     +V+ N +++
Sbjct: 241 AWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLIN 300

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
            YC+ G  E A  L       G+ P   +YN +++GLC  G  + A +   +M + G+ P
Sbjct: 301 AYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTP 360

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           +A TY+ L         I  A ++  ++  +G  PD+V+++ LI    + G++ + L   
Sbjct: 361 NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHF 420

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
             M   G   + + Y++L+   C++G + +AL +  EM A G   D+VTY+  + GLCK+
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
                A  L+NEM  + + P+ +    ++ G C+   + +A   F++++ +N   D V Y
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTY 540

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N +IDG+ K G +G A +L+  +I K I P  +++ +++ GFC +G + +A  L D +  
Sbjct: 541 NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+ P+ VT  T +  YC  G++ +    L +M +  I P   +Y  +I G  K+  L++
Sbjct: 601 KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A  L+ +M   G+  + ITYN I+  FC    +++A Q+L +M    + P  ATY+ LI+
Sbjct: 661 AFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720

Query: 527 GLCVNGDLKNA 537
           G     ++K A
Sbjct: 721 GHVSQDNMKEA 731



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 244/504 (48%), Gaps = 20/504 (3%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           Y++L+     A  + E  E    + R GV       + L  G      +  AW++  +++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
             G + ++ T  +++   C+    E  +     M  +G   +++ Y+ L+++ C+ G ++
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           EA  LL    + G++P L+TY+ ++ GLCK  K  +A  +  EM    ++PN+  +  +L
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
           + +C ++ I EA+  FD +     + D+V ++ +I    + G++ +A+  +R++    I 
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P  V +  LI GFC+NG ++DA ++ D +   G     VTY TF+N  C++        L
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
             EM  + + P   T+T +I+G CK   + +A+ L E M    + PD++TYNT+I  FCK
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
             ++ +A +L + M   ++ P   +Y  +++G C +G L  A  L   + E  I    V 
Sbjct: 550 AGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
             T+IK +C  GD+ KA  +  +M+                    SNG  PD      ++
Sbjct: 610 CNTLIKGYCRSGDMPKAYEYLSKMI--------------------SNGIIPDSFSYNTLI 649

Query: 616 IAFHQGGDLGSVFELAAVMIKSGL 639
             + +  +L   F L   M K GL
Sbjct: 650 DGYLKEANLEKAFILINEMEKRGL 673



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 226/480 (47%), Gaps = 20/480 (4%)

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            + Y +L + +    ++    +  Q L  KG    I     L+ G  + G V+   ++  
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            ++  G +LNV   +++++++CK  + +  +  L +ME  G+  D+VTY+ LI   C++ 
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
            V +A QL N   S+ + P    + AIL GLC+      A+     ++      +   YN
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            ++    +  NI EA +++ ++  + + P +V+F+SLI    +NG +  A      ++  
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G+ P  V YT  ++ +C  G +   L +  EM  +      VTY   + GLCK+    +A
Sbjct: 427 GIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADA 486

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
             L  +M   G+ PD  T+ T+IR +CK  ++ KA  L   M   NL+P   TYN LIDG
Sbjct: 487 DMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
            C  G++  A  L   +   +I    ++Y T++   C+ G + +A+    QM+EKG    
Sbjct: 547 FCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR-- 604

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                             P+   C  ++  + + GD+   +E  + MI +G++PD F  N
Sbjct: 605 ------------------PNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYN 646



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 15/214 (7%)

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
            G   + Y ++++   +  KL+E  +  + +   GV+      N ++    +   +  A+
Sbjct: 183 FGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAW 242

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           ++  ++    +E    T NI+++ LC +   +N    L  ++   +    V Y T+I A+
Sbjct: 243 EIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAY 302

Query: 564 CAEGDVHKAMTFFCQMVEKGFE---------------ISIRDYTKSFFCMMLSNGFPPDQ 608
           C EG V +A         +G E               I   D  K     ML  G  P+ 
Sbjct: 303 CREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNA 362

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                +L+   +  ++    E+   M + G+LPD
Sbjct: 363 ATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPD 396


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 161/528 (30%), Positives = 275/528 (52%), Gaps = 18/528 (3%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDD----IKVSETPR---- 61
           G++ +A  V  KM    L +S+ + N  L  L       D Y      I   E P     
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK-----DCYKTATAIIVFREFPEVGVC 243

Query: 62  -NVYTNSIVIDGLCQQSRLQDA--ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
            NV + +IVI  +CQ  R+++A  +L L E  G  + P V+S + +++ YC+ G  +   
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG--YTPDVISYSTVVNGYCRFGELDKVW 301

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L  +M + GL P+++ Y  +I  LC    + EA E  ++M R G+ PD + Y+ L  GF
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                I  A K   ++  +   PD++TYT +I G+CQIG++ E  KL   M  +G + + 
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + ++ L++  CK+G + +A  +   M   G  P++VTY+ LI GLCK+  +  A +L +E
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M    + PN F + +I+ GLC+   I EA         +    D V Y  ++D Y K G 
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + +A ++ ++++ K + P+IVTFN L+ GFC +G + D  +LL+ +   G+ P+A T+ +
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +  YC   N++   A+ ++M ++ +GP   TY  ++KG CK   ++EA  L ++M   G
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
            +    TY+ +I+ F K K   +A ++ +QM    L      ++   D
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 149/512 (29%), Positives = 256/512 (50%), Gaps = 3/512 (0%)

Query: 97  SVVSLNAIMSRYCKLGF-AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           SV S N  ++R  K  +    A  +F    + G+  +  SYNI+IH +C  G ++EA   
Sbjct: 209 SVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHL 268

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M   G  PD I+YS +  G+    ++   WK+I+ +  KG  P+   Y  +I   C+
Sbjct: 269 LLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           I  + E  +    M+ QG   + + Y+ L+   CK G I  A    YEM +  + PD++T
Sbjct: 329 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ +I G C+   + +A +L++EM  K + P+S     ++ G C+   + +A    + +I
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            + C  +VV Y  +IDG  K G++  A +L  ++ +  + P+I T+NS++ G CK+G + 
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A +L+   +  GL    VTYTT M+AYC+ G + +   +L+EM  K + PT VT+ V++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G C    L++  +LL  M   G+ P+  T+N++++ +C   +L+ A  +   M    + 
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TY  L+ G C   ++K A  L   ++    S++   Y+ +IK         +A   
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
           F QM  +G       +   FF      G  PD
Sbjct: 689 FDQMRREGLAADKEIF--DFFSDTKYKGKRPD 718



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 264/548 (48%), Gaps = 20/548 (3%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGL---CIAGS 148
           K++G      +         G    A+ +F  ML YGL     S N+ +  L   C   +
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 228

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
              A+    +    GV  +  +Y+I+      L +I  A  ++  + +KG  PD+++Y+ 
Sbjct: 229 T--AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           ++ GYC+ G +++  KL EVM  +G K N   Y  ++  +C+  ++ EA     EM   G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           + PD V Y+ LI G CK+  +  A + + EM S+ I+P+   + AI+ G C+   + EA 
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             F  +       D V +  +I+GY K G++ +A +++  +I+   SP++VT+ +LI G 
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           CK G +  A  LL  +   GL+P+  TY + +N  C+ GNI+  + L+ E E   +    
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VTYT ++   CK  ++ +A ++L++M   G+ P  +T+N ++  FC    L    +LLN 
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    + P + T+N L+   C+  +LK A  +   +    +      Y  ++K HC   +
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646

Query: 569 VHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEV 613
           + +A   F +M  KGF +S+  Y+               +  F  M   G   D+EI + 
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706

Query: 614 MLIAFHQG 621
                ++G
Sbjct: 707 FSDTKYKG 714



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 175/369 (47%), Gaps = 3/369 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           + + G +  A     +M   D+   + TY +++        M +   L+ ++       +
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +I+G C+   ++DA             P+VV+   ++   CK G  + A  L  
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K GL P+ F+YN +++GLC +G++EEA++   +    G+  D +TY+ L   +    
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A ++++++L KG  P IVT+ VL+ G+C  G +E+G KL   ML++G   N   ++
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C    +  A  +  +M + G+ PD  TY  L++G CK   + +A  L+ EM  K
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             S +   +  ++ G  +++   EAR  FD +       D  +++   D   K       
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTI 720

Query: 363 VQLYRQLIE 371
           V    ++IE
Sbjct: 721 VDPIDEIIE 729



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 25/254 (9%)

Query: 392 GKVADARRLLDTIKLHGLEPSAVT---YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           G + +ARR+ + +  +GL  S  +   Y T ++  C +      + + +E     +    
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYK--TATAIIVFREFPEVGVCWNV 246

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
            +Y +VI  +C+  +++EA  LL  M + G TPD I+Y+T++  +C+  +L K ++L+  
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    L+P S  Y  +I  LC    L  A+     +    I    V YTT+I   C  GD
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
           +  A  FF       +E+  RD T             PD      ++  F Q GD+    
Sbjct: 367 IRAASKFF-------YEMHSRDIT-------------PDVLTYTAIISGFCQIGDMVEAG 406

Query: 629 ELAAVMIKSGLLPD 642
           +L   M   GL PD
Sbjct: 407 KLFHEMFCKGLEPD 420


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 166/623 (26%), Positives = 286/623 (45%), Gaps = 51/623 (8%)

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           I    +  RL+ A+   +        P+  + NAIM       + + A  ++  ML  G+
Sbjct: 78  IQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGV 137

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            PDA ++ + +   C+ G    AL     +   G +     Y  + +G +       A  
Sbjct: 138 APDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARH 197

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           +  ++L +   PD+ T+  ++   CQ G+V E   L   +L +G   N    ++ +  +C
Sbjct: 198 LFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLC 257

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           + GR++EA+ L+  M A  + PD+VTY+ L+RGLCK  KV +A Q    M ++   P+ F
Sbjct: 258 EDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDF 316

Query: 310 AHGAILLGLCEKEMITEA---------------RMYFDSLIMSNCIQ------------- 341
            +  I+ G C+  M+ EA               R+ + SLI   C +             
Sbjct: 317 TYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEA 376

Query: 342 -------DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                  D+V+YN ++ G  + G I  A+Q+  +++E+   P I T+N +I G CK G +
Sbjct: 377 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNI 436

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
           +DA  +++   + G  P   T+ T ++ YC+   +   L L++ M T  I P  +TY  V
Sbjct: 437 SDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSV 496

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           + GLCK  K +E  +  E+M + G  P+ ITYN +I +FCK   L +A  ++ +M    L
Sbjct: 497 LNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGL 556

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P + ++N LI G C NGDL  A  L   L E   S T   +  +I A+ ++ ++  A  
Sbjct: 557 VPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 616

Query: 575 FFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFH 619
            F +M+ KG++  +  Y                 +    M+S GF P       ML    
Sbjct: 617 IFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLA 676

Query: 620 QGGDLGSVFELAAVMIKSGLLPD 642
               +     +  +M++ G++P+
Sbjct: 677 MNHRVSEAVAIIHIMVRMGVVPE 699



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 246/469 (52%), Gaps = 1/469 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           V+ GL       +A     E  G++  P V + N ++   C+ G    +  L   +LK G
Sbjct: 182 VVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRG 241

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           +  + F+ NI I GLC  G +EEA+     MG + V PD +TY+ L +G    S++  A 
Sbjct: 242 MSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAA 300

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           + + +++ +G  PD  TY  +I GYC+ G ++E  +L +  + +GF  + + Y  L++ +
Sbjct: 301 QYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGL 360

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C  G I+ AL L  E +A  LKPDLV Y+ L++GLC+Q  +  A+Q+ NEM  +   P+ 
Sbjct: 361 CAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDI 420

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           + +  I+ GLC+   I++A +  +  I+   + DV  +N +IDGY K   +  A+QL  +
Sbjct: 421 WTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVER 480

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +    I+P ++T+NS++ G CK GK  +     + + L G  P+A+TY   +  +C+   
Sbjct: 481 MWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 540

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           ++    ++  M    + P  V++  +I G C+   L  A  L + +   G +    T+N 
Sbjct: 541 LEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 600

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           +I ++    +++ A ++  +M     +P   TY IL+DGLC   ++  A
Sbjct: 601 LIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRA 649



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 157/589 (26%), Positives = 265/589 (44%), Gaps = 51/589 (8%)

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
           A +  Y + G    A   F  M  +   P A +YN ++  L  A   ++A +    M   
Sbjct: 76  ASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAA 135

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           GV PDA T+++  K F L  +   A ++++ L  +G D     Y  ++ G    G+    
Sbjct: 136 GVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNA 195

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
             L + ML +    +V  ++ +L ++C+ G + E+  LL ++   G+  +  T +I IRG
Sbjct: 196 RHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRG 255

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           LC+  ++ +A+ L   M    ++P+   +  ++ GLC+   + EA  Y   ++   CI D
Sbjct: 256 LCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPD 314

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
              YN +IDGY K G + EA +L +  + K   P  VT+ SLI G C  G +  A  L +
Sbjct: 315 DFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFN 374

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL---- 458
             +   L+P  V Y + +   C +G I   L ++ EM  +   P   TY ++I GL    
Sbjct: 375 EAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMG 434

Query: 459 -------------------------------CKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
                                          CK+ KL  A+QL+E M+  G+ PD ITYN
Sbjct: 435 NISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYN 494

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           +++   CK    ++  +   +M L    P + TYNILI+  C    L+ A  ++V + + 
Sbjct: 495 SVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQD 554

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYT-------- 592
            +    V++ T+I   C  GD+  A   F ++ EKG       F I I  Y+        
Sbjct: 555 GLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMA 614

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           +  F  M+S G+ PD     +++    +  ++   +   A MI  G +P
Sbjct: 615 EKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVP 663



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 242/484 (50%), Gaps = 4/484 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMWD--LYDDIKVSETPRNVYTN 66
           G  ++A  +  +M   D+   + T+N++L+ L +  D+M    L   +       N +T 
Sbjct: 190 GHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTC 249

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I I GLC+  RL++A+  L E  G    P VV+ N +M   CK    + A      M+ 
Sbjct: 250 NIWIRGLCEDGRLEEAVA-LVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMN 308

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD F+YN +I G C +G ++EA E   D    G  PD +TY  L  G      I  
Sbjct: 309 QGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIER 368

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A ++  +   K   PD+V Y  L+ G C+ G +   L++   M+ +G   ++  Y+++++
Sbjct: 369 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIIN 428

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CK G I +A  ++ +    G  PD+ T++ LI G CK+ K+  A+QL   M +  I+P
Sbjct: 429 GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAP 488

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   + ++L GLC+     E    F+ +I+  C  + + YNI+I+ + K+  + EA  + 
Sbjct: 489 DVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI 548

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++ +  + P  V+FN+LI+GFC+NG +  A  L   +   G   +A T+   + AY  +
Sbjct: 549 VRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSK 608

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
            N+Q    +  EM +K   P   TY +++ GLCK   +  A   L +M   G  P   T+
Sbjct: 609 LNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATF 668

Query: 487 NTII 490
             ++
Sbjct: 669 GRML 672



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 215/423 (50%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T + ++ GLC+ S++Q+A  +L     +   P   + N I+  YCK G  + A  L 
Sbjct: 279 DVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELL 338

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              +  G  PD  +Y  LI+GLC  G +E ALE  N+     ++PD + Y+ L KG    
Sbjct: 339 KDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQ 398

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             I  A +V+ +++ +G  PDI TY ++I G C++GN+ +   +    + +G+  +V  +
Sbjct: 399 GLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTF 458

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   CK  ++D AL L+  M   G+ PD++TY+ ++ GLCK  K  +  + + EM  
Sbjct: 459 NTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMIL 518

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   PN+  +  ++   C+   + EA      +     + D V +N +I G+ + G++  
Sbjct: 519 KGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDG 578

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+++L EK  S +  TFN LI  +     +  A ++   +   G +P   TY   ++
Sbjct: 579 AYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVD 638

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+  N+ R  A L EM +K   P+  T+  ++  L    ++ EAV ++  M  +GV P
Sbjct: 639 GLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVP 698

Query: 482 DQI 484
           + +
Sbjct: 699 EVV 701



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 189/430 (43%), Gaps = 25/430 (5%)

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT--YSILIRGLCKQDKVHKAIQL 295
           + AY  L+  +  +GR+D+    L    +  L PD +   Y   I+   +  ++  A+  
Sbjct: 35  IPAYRALIRELVSAGRLDDVDAALASARS-HLAPDSLQPLYVASIQAYARAGRLRAAVDA 93

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +  M      P + A+ AI+  L       +A   +  ++ +    D   + + +  +  
Sbjct: 94  FERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCL 153

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G    A++L R L E+        + +++ G   +G   +AR L D +    + P   T
Sbjct: 154 TGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVAT 213

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           +   ++A C++G++    ALL ++  + +     T  + I+GLC+  +L+EAV L+E M 
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMG 273

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
              V PD +TYNT++R  CK   +++A Q L +M      P   TYN +IDG C +G L+
Sbjct: 274 AY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQ 332

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK-- 593
            A  LL           +V Y ++I   CAEGD+ +A+  F +   K  +  +  Y    
Sbjct: 333 EATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLV 392

Query: 594 -------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM---IKS 637
                             M+  G  PD     +++    +   +G++ + A VM   I  
Sbjct: 393 KGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCK---MGNISDAAVVMNDAIVK 449

Query: 638 GLLPDKFLIN 647
           G LPD F  N
Sbjct: 450 GYLPDVFTFN 459



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 156/337 (46%), Gaps = 32/337 (9%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           R G++  A+ V+ +M E      I TYN                                
Sbjct: 397 RQGLILHALQVMNEMVEEGCHPDIWTYNI------------------------------- 425

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
            +I+GLC+   + DA + + +   K + P V + N ++  YCK    + A  L   M  Y
Sbjct: 426 -IINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTY 484

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+ PD  +YN +++GLC AG  +E  E   +M   G  P+AITY+IL + F  ++Q+  A
Sbjct: 485 GIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEA 544

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             VI ++   G  PD V++  LI G+C+ G+++    L + +  +G+      +++L+ +
Sbjct: 545 SGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGA 604

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
                 +  A  +  EM + G KPDL TY IL+ GLCK   V +A     EM SK   P+
Sbjct: 605 YSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPS 664

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
               G +L  L     ++EA      ++    + +VV
Sbjct: 665 MATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV 701


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 150/568 (26%), Positives = 277/568 (48%), Gaps = 20/568 (3%)

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           Q  +L++     Q    K    S+ + N ++    + G+ ++A  ++  +++ G+  + +
Sbjct: 199 QAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVY 258

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           + NI+++ LC     E  + F +DM   GV  D +TY+ L   +     +  A++++   
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             +G +P ++TY  ++ G C+IG  +    +   ML  G   N   Y+ LL  +C+   I
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            EA  +  EM   G+ PDLV++S LI  L +   +++A+  + EM    I P++  +  +
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G C    +++A    D ++   C  DVV YN  ++G  K     +A  L+ +++E+ +
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P   TF +LI G+CK+G +  A  L + +    L+P  VTY T ++ +C+ G + R   
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L  +M  K I P H++Y  V+ G C    L EA+ L + M   G+ P+ +T NT+I+ +C
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC 618

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           +  D+ KA++ L++M  + + P S +YN LIDG     +L+ A  L+  +++  +    +
Sbjct: 619 RSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
            Y  I+   CAEG + +A     +M+E G                      PD      +
Sbjct: 679 TYNLILNGFCAEGKMQEAEQVLRKMIEIGIN--------------------PDGATYSSL 718

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +       ++   F     M++ GL+PD
Sbjct: 719 INGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 157/551 (28%), Positives = 284/551 (51%), Gaps = 17/551 (3%)

Query: 4   FVYSRTGMVHD---AVFVIAK-----------MKELDLKVSIQTYNSLLYNLRHT---DI 46
           F +   G+++D     +V AK           ++   + VSI   N LL  L  T   D+
Sbjct: 181 FYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDL 240

Query: 47  MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMS 106
            W++Y ++       NVYT +I+++ LC+  + ++ + FL +  GK     +V+ N +++
Sbjct: 241 AWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLIN 300

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
            YC+ G  E A  L       G+ P   +YN +++GLC  G  + A +   +M + G+ P
Sbjct: 301 AYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTP 360

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           +A TY+ L         I  A ++  ++  +G  PD+V+++ LI    + G++ + L   
Sbjct: 361 NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHF 420

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
             M   G   + + Y++L+   C++G + +AL +  EM A G   D+VTY+  + GLCK+
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
                A  L+NEM  + + P+ +    ++ G C+   + +A   F++++ +N   D V Y
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTY 540

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N +IDG+ K G +G A +L+  +I K I P  +++ +++ GFC +G + +A  L D +  
Sbjct: 541 NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+ P+ VT  T +  YC  G++ +    L +M +  I P   +Y  +I G  K+  L++
Sbjct: 601 KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A  L+ +M   G+  + ITYN I+  FC    +++A Q+L +M    + P  ATY+ LI+
Sbjct: 661 AFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720

Query: 527 GLCVNGDLKNA 537
           G     ++K A
Sbjct: 721 GHVSQDNMKEA 731



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 244/504 (48%), Gaps = 20/504 (3%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           Y++L+     A  + E  E    + R GV       + L  G      +  AW++  +++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
             G + ++ T  +++   C+    E  +     M  +G   +++ Y+ L+++ C+ G ++
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           EA  LL    + G++P L+TY+ ++ GLCK  K  +A  +  EM    ++PN+  +  +L
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
           + +C ++ I EA+  FD +     + D+V ++ +I    + G++ +A+  +R++    I 
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P  V +  LI GFC+NG ++DA ++ D +   G     VTY TF+N  C++        L
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
             EM  + + P   T+T +I+G CK   + +A+ L E M    + PD++TYNT+I  FCK
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
             ++ +A +L + M   ++ P   +Y  +++G C +G L  A  L   + E  I    V 
Sbjct: 550 AGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
             T+IK +C  GD+ KA  +  +M+                    SNG  PD      ++
Sbjct: 610 CNTLIKGYCRSGDMPKAYEYLSKMI--------------------SNGIIPDSFSYNTLI 649

Query: 616 IAFHQGGDLGSVFELAAVMIKSGL 639
             + +  +L   F L   M K GL
Sbjct: 650 DGYLKEANLEKAFILINEMEKRGL 673



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 226/480 (47%), Gaps = 20/480 (4%)

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            + Y +L + +    ++    +  Q L  KG    I     L+ G  + G V+   ++  
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            ++  G +LNV   +++++++CK  + +  +  L +ME  G+  D+VTY+ LI   C++ 
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
            V +A QL N   S+ + P    + AIL GLC+      A+     ++      +   YN
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            ++    +  NI EA +++ ++  + + P +V+F+SLI    +NG +  A      ++  
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G+ P  V YT  ++ +C  G +   L +  EM  +      VTY   + GLCK+    +A
Sbjct: 427 GIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADA 486

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
             L  +M   G+ PD  T+ T+IR +CK  ++ KA  L   M   NL+P   TYN LIDG
Sbjct: 487 DMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
            C  G++  A  L   +   +I    ++Y T++   C+ G + +A+    QM+EKG    
Sbjct: 547 FCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR-- 604

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                             P+   C  ++  + + GD+   +E  + MI +G++PD F  N
Sbjct: 605 ------------------PNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYN 646



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 15/214 (7%)

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
            G   + Y ++++   +  KL+E  +  + +   GV+      N ++    +   +  A+
Sbjct: 183 FGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAW 242

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           ++  ++    +E    T NI+++ LC +   +N    L  ++   +    V Y T+I A+
Sbjct: 243 EIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAY 302

Query: 564 CAEGDVHKAMTFFCQMVEKGFE---------------ISIRDYTKSFFCMMLSNGFPPDQ 608
           C EG V +A         +G E               I   D  K     ML  G  P+ 
Sbjct: 303 CREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNA 362

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                +L+   +  ++    E+   M + G+LPD
Sbjct: 363 ATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPD 396


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 165/598 (27%), Positives = 290/598 (48%), Gaps = 22/598 (3%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E P +VY  + +I  LC++ R  DA   L+   G      V + N +++ YC+ G  + A
Sbjct: 71  EAP-DVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   M    + PDA++Y  LI  LC  G + +AL   +DM R G +P+ +TY++L + 
Sbjct: 130 RRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
               S    A  V+ ++  KG  P+IVTY V+I G C+ G V++   L   + S G + +
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPD 246

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            ++Y+ LL  +C S R D+   L  EM      P+ VT+ +LIR  C+   V +AIQ+  
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQ 306

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M     + N+     ++  +C++  + +A  + +++    C  D + Y  ++ G  +  
Sbjct: 307 QMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
              +A +L ++++     P+ VTFN+ I   C+ G +  A  L++ ++ HG     VTY 
Sbjct: 367 RWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYN 426

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N +C +G+I   L L + M  K   P  +TYT ++ GLC   +L  A +L+ +M   
Sbjct: 427 ALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHR 483

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
              P+ +T+N ++  FC+   L +A +L+ QM  H   P   TYN L DG+  +   ++A
Sbjct: 484 DCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDA 543

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---- 593
             LL  L    +S   + +++II     E  V +A+  F    + G       Y K    
Sbjct: 544 LELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLG 603

Query: 594 -----------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                       F   M+SNG  P++    +++    + G L    +L +++   G++
Sbjct: 604 LCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVV 661



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/579 (25%), Positives = 285/579 (49%), Gaps = 9/579 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           R G   DA  V+   +     V +  YN+L+       H D    L   + V+    + Y
Sbjct: 87  RRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVAP---DAY 143

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I  LC + R+ DA+  L +   +   P+VV+   ++   CK    E A  +   M
Sbjct: 144 TYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEM 203

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G  P+  +YN++I+G+C  G +++A +  N +  +G +PD ++Y+ L KG     + 
Sbjct: 204 RAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRW 263

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
               ++  +++ K   P+ VT+ +LI  +C+ G VE  +++ + M       N    +++
Sbjct: 264 DDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIV 323

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++S+CK GR+D+A   L  M + G  PD ++Y+ +++GLC+ ++ + A +L  EM     
Sbjct: 324 INSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNC 383

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN       +  LC+K +I +A M  + +    C   VV YN +++G+   G+I  A++
Sbjct: 384 PPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALE 443

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+R +  K   P+ +T+ +L+ G C   ++  A  L+  +      P+ VT+   +N +C
Sbjct: 444 LFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFC 500

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           ++G +   + L+++M      P  +TY  +  G+ K    ++A++LL  +   GV+PD I
Sbjct: 501 QKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVI 560

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           T+++II    K   + +A Q+ +      + P +  YN ++ GLC   ++ NA   L  +
Sbjct: 561 TFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYM 620

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             +     +  Y  +I+    EG + +A      +  +G
Sbjct: 621 VSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRG 659



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 227/470 (48%), Gaps = 6/470 (1%)

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G  PD +    LI  LC  G   +A          G   D   Y+ L  G+     + 
Sbjct: 68  RDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD 127

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A ++I  + +    PD  TYT LI   C  G V + L L + ML +G + NV+ Y+VLL
Sbjct: 128 AARRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 184

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
            +MCK+   ++A+ +L EM A G  P++VTY+++I G+C++ +V  A  L N + S    
Sbjct: 185 EAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQ 244

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P++ ++  +L GLC  +   +    F  ++  NC+ + V ++++I  + + G +  A+Q+
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 304

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
            +Q+ E   + +    N +I   CK G+V DA + L+ +  +G  P  ++YTT +   C 
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCR 364

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
                    LL+EM      P  VT+   I  LC++  +++A+ L+E M   G T   +T
Sbjct: 365 AERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVT 424

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YN ++  FC    +  A +L   M     +P + TY  L+ GLC    L  A  L+  + 
Sbjct: 425 YNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEML 481

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF 595
             +     V +  ++   C +G + +A+    QM+E G   ++  Y   F
Sbjct: 482 HRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLF 531



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 229/468 (48%), Gaps = 6/468 (1%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A+ V+ +M+      +I TYN ++  +      D   DL + +       +  + + ++ 
Sbjct: 196 AMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLK 255

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           GLC   R  D      E   K   P+ V+ + ++  +C+ G  E A  +   M ++    
Sbjct: 256 GLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECAT 315

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           +    NI+I+ +C  G +++A +F N+MG +G  PD I+Y+ + KG     + + A +++
Sbjct: 316 NTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELL 375

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           ++++     P+ VT+   IC  CQ G +E+ + L E M   G  + V+ Y+ L++  C  
Sbjct: 376 KEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQ 435

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G ID AL L   M     KP+ +TY+ L+ GLC  +++  A +L  EM  +   PN    
Sbjct: 436 GHIDSALELFRSMPC---KPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTF 492

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++   C+K  + EA    + ++   C  +++ YN + DG  K  +  +A++L   L+ 
Sbjct: 493 NVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVS 552

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K +SP ++TF+S+I    K  +V +A ++    +  G+ P A+ Y   +   C+   I  
Sbjct: 553 KGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDN 612

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
            +  L  M +    P   TY ++I+GL ++  L+EA  LL  +   GV
Sbjct: 613 AIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 192/377 (50%), Gaps = 6/377 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           ML   + R GMV  A+ V+ +M E +   +    N ++ ++      D  +   +++   
Sbjct: 287 MLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSY 346

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +  + + V+ GLC+  R  DA   L+E       P+ V+ N  +   C+ G  E A
Sbjct: 347 GCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQA 406

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M ++G      +YN L++G C+ G ++ ALE    M     +P+ ITY+ L  G
Sbjct: 407 IMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTG 463

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A +++ ++L +   P++VT+ VL+  +CQ G ++E ++L E M+  G   N
Sbjct: 464 LCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPN 523

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +I Y+ L   + K    ++AL LL+ + + G+ PD++T+S +I  L K+D+V +AIQ+++
Sbjct: 524 LITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFH 583

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
                 + P +  +  ILLGLC++  I  A  +   ++ + C+ +   Y I+I+G  + G
Sbjct: 584 LAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREG 643

Query: 358 NIGEAVQLYRQLIEKRI 374
            + EA  L   L  + +
Sbjct: 644 LLKEAQDLLSMLCSRGV 660


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 149/525 (28%), Positives = 281/525 (53%), Gaps = 3/525 (0%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           V DAV +   M +     SI  +N LL     +   +++  L + ++      ++YT SI
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
            I+  C++S+L  A+  L +     + P +V+L+++++ YC       A  L   M++ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD F++  LIHGL +     EA+   + M + G +PD +TY  +  G      I  A 
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            +++K+     + D+V Y  +I G C+  ++++ L L   M ++G + +V  YS L+S +
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C  GR  +A  LL +M    + P++VT+S LI    K+ K+ +A +LY+EM  + I P+ 
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F + +++ G C  + + EA+  F+ +I  +C  +VV Y+ +I G+ K   + E ++L+R+
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + ++ +  + VT+ +LI+GF +     +A+ +   +   G+ P+ +TY   ++  C+ G 
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           + + + + + ++   + P   TY ++I+G+CK  K+++  +L  ++ + GV+P+ I YNT
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           +I  FC+     +A  LL +M      P S TYN LI     +GD
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588



 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 149/506 (29%), Positives = 262/506 (51%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           ++ DA+    +       PS+V  N ++S   K+   E+   L   M   G+  D ++Y+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           I I+  C    +  AL     M + G EPD +T S L  G+    +IS A  ++ +++  
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  PD  T+T LI G        E + L + M+ +G + +++ Y  +++ +CK G ID A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L LL +ME   ++ D+V Y+ +I GLCK   +  A+ L+ EM +K I P+ F + +++  
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC     ++A      +I      +VV ++ +ID +VK G + EA +LY ++I++ I P 
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           I T++SLI GFC + ++ +A+ + + +      P+ VTY+T +  +C+   ++  + L +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM  + +    VTYT +I G  +      A  + + M  +GV P+ +TYN ++   CK  
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            L KA  +   +    +EP   TYNI+I+G+C  G +++   L  +L    +S   +AY 
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG 583
           T+I   C +G   +A +   +M E G
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDG 568



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 242/483 (50%), Gaps = 3/483 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           + R   +  A+ V+AKM +L  +  I T +SLL    H+  + D   L D +       +
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T + +I GL   ++  +A+  + +   +   P +V+   +++  CK G  ++A  L  
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K  +  D   YN +I GLC    M++AL    +M   G+ PD  TYS L        
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           + S A +++  ++ +  +P++VT++ LI  + + G + E  KL + M+ +    ++  YS
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++  C   R+DEA  +   M +    P++VTYS LI+G CK  +V + ++L+ EM  +
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +  N+  +  ++ G  +      A+M F  ++      +++ YNI++DG  K G + +A
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + ++  L    + P I T+N +I G CK GKV D   L   + L G+ P+ + Y T ++ 
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +C +G+ +   +LL++M+     P   TY  +I+   +    + + +L+++M   G   D
Sbjct: 548 FCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607

Query: 483 QIT 485
             T
Sbjct: 608 AST 610



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 245/544 (45%), Gaps = 50/544 (9%)

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +++A++   DM +    P  + ++ L      +++      + +++   G   D+ TY++
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
            I  +C+   +   L +   M+  G++ +++  S LL+  C S RI +A+ L+ +M  +G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
            KPD  T++ LI GL   +K  +A+ L ++M  +   P+   +G ++ GLC++  I  A 
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
                +       DVV+YN +IDG  K  ++ +A+ L+ ++  K I P + T++SLI   
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C  G+ +DA RLL  +    + P+ VT++  ++A+ +EG +     L  EM  ++I P  
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
            TY+ +I G C   +L EA  + E M      P+ +TY+T+I+ FCK K + +  +L  +
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423

Query: 509 MWLHNL-----------------------------------EPTSATYNILIDGLCVNGD 533
           M    L                                    P   TYNIL+DGLC NG 
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           L  A  +   LQ   +      Y  +I+  C  G V      FC +  KG   ++  Y  
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543

Query: 594 --SFFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
             S FC              M  +G  P+      ++ A  + GD  +  EL   M   G
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603

Query: 639 LLPD 642
              D
Sbjct: 604 FAGD 607



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 3/169 (1%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVI 70
           +A  V  +M  + +  +I TYN LL  L     +     +++ ++ S    ++YT +I+I
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +G+C+  +++D        + K   P+V++ N ++S +C+ G  E A  L   M + G  
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           P++ +YN LI      G  E + E   +M   G   DA T  ++    H
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 619



 Score = 42.4 bits (98), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 55/140 (39%)

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           K+ +AV L  DM      P  + +N ++ +  K         L  QM    +     TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           I I+  C    L  A  +L  + +       V  ++++  +C    +  A+    QMVE 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 583 GFEISIRDYTKSFFCMMLSN 602
           G++     +T     + L N
Sbjct: 183 GYKPDTFTFTTLIHGLFLHN 202


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 161/536 (30%), Positives = 264/536 (49%), Gaps = 25/536 (4%)

Query: 66  NSIVIDGLCQQSRLQ---------DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           +SI    +C + RL+         DAI   QE       PS+V      SR+    F+ +
Sbjct: 47  SSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDF----SRF----FSAI 98

Query: 117 AKGL-------FCLMLKY-GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           A+         FC  L+  G+  + ++ NI+I+  C       A      + + G EPD 
Sbjct: 99  ARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDT 158

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
            T++ L KG  L  ++S A  ++ +++  G  PD+VTY  ++ G C+ G+    L L   
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M  +  K +V  YS ++ S+C+ G ID A+ L  EME  G+K  +VTY+ L+RGLCK  K
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
            +    L  +M S+ I PN      +L    ++  + EA   +  +I      +++ YN 
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           ++DGY     + EA  +   ++  + SP IVTF SLI G+C   +V D  ++   I   G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L  +AVTY+  +  +C+ G I+    L QEM +  + P  +TY +++ GLC   KL++A+
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           ++ ED+    +    + Y TII   CK   +  A+ L   +    ++P   TY ++I GL
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           C  G L  A+ LL  ++E   +     Y T+I+AH  +GD+  +     +M   GF
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 156/602 (25%), Positives = 267/602 (44%), Gaps = 62/602 (10%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK- 118
           P  + T S+  D LC        I     +  ++F  S+ + N       + G  ++ K 
Sbjct: 19  PHLLKTGSLRTDLLC-------TISSFFSSCERDFS-SISNGNVCFRERLRSGIVDIKKD 70

Query: 119 ---GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
               LF  M++    P    ++     +         L+F   +  +G+  +  T +I+ 
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
             F    +   A+ V+ K++  G +PD  T+  LI G    G V E + L + M+  G +
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +V+ Y+ +++ +C+SG    AL LL +ME   +K D+ TYS +I  LC+   +  AI L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           + EM +K I  +                                   VV YN ++ G  K
Sbjct: 251 FKEMETKGIKSS-----------------------------------VVTYNSLVRGLCK 275

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G   +   L + ++ + I P+++TFN L+  F K GK+ +A  L   +   G+ P+ +T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y T M+ YC +  +     +L  M      P  VT+T +IKG C   ++ + +++  ++ 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G+  + +TY+ +++ FC+   ++ A +L  +M  H + P   TY IL+DGLC NG L+
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK-- 593
            A  +   LQ+  + L  V YTTII+  C  G V  A   FC +  KG + ++  YT   
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 594 SFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           S  C              M  +G  P+      ++ A  + GDL +  +L   M   G  
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

Query: 641 PD 642
            D
Sbjct: 576 AD 577



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 225/452 (49%), Gaps = 3/452 (0%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVID 71
           A  V+ K+ +L  +    T+N+L+  L     + +   L D +  +    +V T + +++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           G+C+      A+  L++   +     V + + I+   C+ G  + A  LF  M   G+  
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
              +YN L+ GLC AG   +      DM    + P+ IT+++L   F    ++  A ++ 
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           ++++ +G  P+I+TY  L+ GYC    + E   + ++M+      +++ ++ L+   C  
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            R+D+ + +   +   GL  + VTYSIL++G C+  K+  A +L+ EM S  + P+   +
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
           G +L GLC+   + +A   F+ L  S     +V+Y  +I+G  K G + +A  L+  L  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K + P+++T+  +I G CK G +++A  LL  ++  G  P+  TY T + A+  +G++  
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
              L++EM++        +  +VI  L    K
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 161/536 (30%), Positives = 264/536 (49%), Gaps = 25/536 (4%)

Query: 66  NSIVIDGLCQQSRLQ---------DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           +SI    +C + RL+         DAI   QE       PS+V      SR+    F+ +
Sbjct: 47  SSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDF----SRF----FSAI 98

Query: 117 AKGL-------FCLMLKY-GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           A+         FC  L+  G+  + ++ NI+I+  C       A      + + G EPD 
Sbjct: 99  ARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDT 158

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
            T++ L KG  L  ++S A  ++ +++  G  PD+VTY  ++ G C+ G+    L L   
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M  +  K +V  YS ++ S+C+ G ID A+ L  EME  G+K  +VTY+ L+RGLCK  K
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
            +    L  +M S+ I PN      +L    ++  + EA   +  +I      +++ YN 
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           ++DGY     + EA  +   ++  + SP IVTF SLI G+C   +V D  ++   I   G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L  +AVTY+  +  +C+ G I+    L QEM +  + P  +TY +++ GLC   KL++A+
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           ++ ED+    +    + Y TII   CK   +  A+ L   +    ++P   TY ++I GL
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           C  G L  A+ LL  ++E   +     Y T+I+AH  +GD+  +     +M   GF
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 139/534 (26%), Positives = 270/534 (50%), Gaps = 42/534 (7%)

Query: 8   RTGMVH----DAVFVIAKM---KELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           R+G+V     DA+ +  +M   + L   V    + S +   +  +++ D    ++++   
Sbjct: 61  RSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N+YT +I+I+  C                                R CK  FA    G 
Sbjct: 121 HNIYTLNIMINCFC--------------------------------RCCKTCFAYSVLGK 148

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              ++K G  PD  ++N LI GL + G + EA+   + M  +G +PD +TY+ +  G   
Sbjct: 149 ---VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
               S A  +++K+  +    D+ TY+ +I   C+ G ++  + L + M ++G K +V+ 
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+  +CK+G+ ++   LL +M +  + P+++T+++L+    K+ K+ +A +LY EM 
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           ++ ISPN   +  ++ G C +  ++EA    D ++ + C  D+V +  +I GY  +  + 
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           + ++++R + ++ +  + VT++ L+ GFC++GK+  A  L   +  HG+ P  +TY   +
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C+ G +++ L + ++++   +    V YT +I+G+CK  K+++A  L   +   GV 
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
           P+ +TY  +I   CK   L +A  LL +M      P   TYN LI     +GDL
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 156/602 (25%), Positives = 267/602 (44%), Gaps = 62/602 (10%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK- 118
           P  + T S+  D LC  S           +  ++F  S+ + N       + G  ++ K 
Sbjct: 19  PHLLKTGSLRTDLLCTISSFF-------SSCERDFS-SISNGNVCFRERLRSGIVDIKKD 70

Query: 119 ---GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
               LF  M++    P    ++     +         L+F   +  +G+  +  T +I+ 
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
             F    +   A+ V+ K++  G +PD  T+  LI G    G V E + L + M+  G +
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +V+ Y+ +++ +C+SG    AL LL +ME   +K D+ TYS +I  LC+   +  AI L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           + EM +K I  +                                   VV YN ++ G  K
Sbjct: 251 FKEMETKGIKSS-----------------------------------VVTYNSLVRGLCK 275

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G   +   L + ++ + I P+++TFN L+  F K GK+ +A  L   +   G+ P+ +T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y T M+ YC +  +     +L  M      P  VT+T +IKG C   ++ + +++  ++ 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G+  + +TY+ +++ FC+   ++ A +L  +M  H + P   TY IL+DGLC NG L+
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK-- 593
            A  +   LQ+  + L  V YTTII+  C  G V  A   FC +  KG + ++  YT   
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 594 SFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           S  C              M  +G  P+      ++ A  + GDL +  +L   M   G  
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

Query: 641 PD 642
            D
Sbjct: 576 AD 577


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 166/620 (26%), Positives = 289/620 (46%), Gaps = 36/620 (5%)

Query: 39  YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSV 98
           Y ++  +   DL+ D+  S    +V   + ++  + +  R    I   Q+   K+    +
Sbjct: 57  YEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDI 116

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
            S   ++  +C       A   F  + K GLHPD  ++  L+HGLC+   + EAL+  + 
Sbjct: 117 YSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQ 176

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           + R    PD +T++ L  G     ++  A  ++ +++  G  PD +TY   + G C++G+
Sbjct: 177 ICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGD 232

Query: 219 VEEGLK-LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
               L  LR++      K NV+ YS ++  +CK GR  ++  L  EM+  G+ P++VTY+
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN 292

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            +I G C   +   A +L  EM  ++ISPN   + A++    ++    EA   +D ++  
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
             I + + YN MIDG+ K   +  A  ++  +  K  SP + TF +LI G+C   ++ D 
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 412

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             LL  +   GL  + VTY T ++ +C  G++   L L Q+M +  + P  VT   ++ G
Sbjct: 413 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 472

Query: 458 LCKQWKLQEAVQLLEDMY-----------VIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
           LC   KL++A+++ + M              GV PD +TYN +I          +A +L 
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELY 532

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +M    + P + TY+ +IDGLC    L  A  + VS+   + S   V + T+I  +C  
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA 592

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
           G V   +  FC+M  +                    G   D  I   ++  F + G++  
Sbjct: 593 GRVDDGLELFCEMGRR--------------------GIVADAIIYITLIYGFRKVGNING 632

Query: 627 VFELAAVMIKSGLLPDKFLI 646
             ++   MI SG+ PD   I
Sbjct: 633 ALDIFQEMISSGVYPDTITI 652



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 160/603 (26%), Positives = 286/603 (47%), Gaps = 22/603 (3%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           + DA+ + + M       S+  +N L+     +   D++  LY  ++  +   ++Y+ +I
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I   C  S+L  A+    +       P VV+   ++   C       A  LF  + +  
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  ++  L++GLC  G + EA+   + M  +G++PD ITY     G   +     A 
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 189 KVIQKLL-IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            +++K+  I    P++V Y+ +I G C+ G   +   L   M  +G   N++ Y+ ++  
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            C SGR   A  LL EM    + P++VTY+ LI    K+ K  +A +LY+EM  + I PN
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           +  + +++ G C+++ +  A   F  +    C  DV  +  +IDGY     I + ++L  
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++  + +  + VT+N+LI+GFC  G +  A  L   +   G+ P  VT  T ++  C+ G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 428 NIQRLLALLQEMET-----------KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            ++  L + + M+              + P  +TY ++I GL  + K  EA +L E+M  
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 537

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+ PD ITY+++I   CK   L +A Q+   M   +  P   T+N LI+G C  G + +
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 597

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF---EISIRDYTK 593
              L   +    I    + Y T+I      G+++ A+  F +M+  G     I+IR+   
Sbjct: 598 GLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 657

Query: 594 SFF 596
            F+
Sbjct: 658 GFW 660



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 239/488 (48%), Gaps = 27/488 (5%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDI----------KVS 57
           R G V +AV ++ +M E  L+    TY + +      D M  + D +          ++S
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFV------DGMCKMGDTVSALNLLRKMEEIS 247

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NV   S +IDGLC+  R  D+     E   K   P++V+ N ++  +C  G    A
Sbjct: 248 HIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAA 307

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   ML+  + P+  +YN LI+     G   EA E  ++M   G+ P+ ITY+ +  G
Sbjct: 308 QRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 367

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    ++  A  +   +  KG  PD+ T+T LI GYC    +++G++L   M  +G   N
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + Y+ L+   C  G ++ AL L  +M + G+ PD+VT + L+ GLC   K+  A++++ 
Sbjct: 428 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 487

Query: 298 EMCSKR-----------ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            M   +           + P+   +  ++ GL  +    EA   ++ +     + D + Y
Sbjct: 488 AMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           + MIDG  K   + EA Q++  +  K  SP++VTFN+LI G+CK G+V D   L   +  
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 607

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+   A+ Y T +  + + GNI   L + QEM +  + P  +T   ++ G   + +L+ 
Sbjct: 608 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELER 667

Query: 467 AVQLLEDM 474
           AV +LED+
Sbjct: 668 AVAMLEDL 675



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/550 (24%), Positives = 260/550 (47%), Gaps = 19/550 (3%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A+    K+ +L L   + T+ +LL+ L          DL+  I       +V T + +++
Sbjct: 135 ALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMN 190

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LH 130
           GLC++ R+ +A+  L         P  ++    +   CK+G    A  L   M +   + 
Sbjct: 191 GLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIK 250

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+   Y+ +I GLC  G   ++     +M   G+ P+ +TY+ +  GF +  + S A ++
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           +Q++L +   P++VTY  LI  + + G   E  +L + ML +G   N I Y+ ++   CK
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             R+D A  + Y M   G  PD+ T++ LI G C   ++   ++L +EM  + +  N+  
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C    +  A      +I S    D+V  N ++DG    G + +A+++++ + 
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 371 EKR-----------ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           + +           + P ++T+N LI G    GK  +A  L + +   G+ P  +TY++ 
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C++  +     +   M +K+  P  VT+  +I G CK  ++ + ++L  +M   G+
Sbjct: 551 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 610

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             D I Y T+I  F K  ++  A  +  +M    + P + T   ++ G     +L+ A  
Sbjct: 611 VADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVA 670

Query: 540 LLVSLQEHNI 549
           +L  LQ + +
Sbjct: 671 MLEDLQRYQL 680



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 224/495 (45%), Gaps = 25/495 (5%)

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
            GS+  AL   +  G  G          L  G + +  +  A  +   +L     P ++ 
Sbjct: 24  TGSIRHALAEKSRDGESGEAGFRGESLKLRSGSYEIKGLEDAIDLFSDMLRSRPLPSVID 83

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           +  L+    ++   +  + L + M  +  + ++ ++++L+   C   ++  AL    ++ 
Sbjct: 84  FNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLT 143

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
            +GL PD+VT++ L+ GLC   +V +A+ L++++C     P+      ++ GLC +  + 
Sbjct: 144 KLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC----RPDVLTFTTLMNGLCREGRVV 199

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE-KRISPSIVTFNSL 384
           EA    D ++ +    D + Y   +DG  K+G+   A+ L R++ E   I P++V ++++
Sbjct: 200 EAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAI 259

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G CK+G+ +D+  L   ++  G+ P+ VTY   +  +C  G       LLQEM  + I
Sbjct: 260 IDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKI 319

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  VTY  +I    K+ K  EA +L ++M   G+ P+ ITYN++I  FCK   L  A  
Sbjct: 320 SPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 379

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           +   M      P   T+  LIDG C    + +   LL  +    +    V Y T+I   C
Sbjct: 380 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
             GD++ A+    QM+                    S+G  PD   C  +L      G L
Sbjct: 440 LVGDLNAALDLSQQMI--------------------SSGVCPDIVTCNTLLDGLCDNGKL 479

Query: 625 GSVFELAAVMIKSGL 639
               E+   M KS +
Sbjct: 480 KDALEMFKAMQKSKM 494



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 239/450 (53%), Gaps = 19/450 (4%)

Query: 8   RTGMVHDAVFVIAKMKELD-LKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRN 62
           + G    A+ ++ KM+E+  +K ++  Y++++  L    RH+D   +L+ +++      N
Sbjct: 229 KMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD-SHNLFIEMQDKGIFPN 287

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEVAKGLF 121
           + T + +I G C   R   A   LQE   ++  P+VV+ NA+++ + K G F E A+ L+
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAE-LY 346

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  G+ P+  +YN +I G C    ++ A +    M   G  PD  T++ L  G+   
Sbjct: 347 DEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 406

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I    +++ ++  +G   + VTY  LI G+C +G++   L L + M+S G   +++  
Sbjct: 407 KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 466

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAV-----------GLKPDLVTYSILIRGLCKQDKVH 290
           + LL  +C +G++ +AL +   M+             G++PD++TY+ILI GL  + K  
Sbjct: 467 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFL 526

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A +LY EM  + I P++  + +++ GLC++  + EA   F S+   +   +VV +N +I
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           +GY K G + + ++L+ ++  + I    + + +LIYGF K G +  A  +   +   G+ 
Sbjct: 587 NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVY 646

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           P  +T    +  +  +  ++R +A+L++++
Sbjct: 647 PDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 127/281 (45%), Gaps = 14/281 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRN 62
           Y     + D + ++ +M    L  +  TYN+L++    +   +   DL   +  S    +
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQE--------TAGKEFG---PSVVSLNAIMSRYCKL 111
           + T + ++DGLC   +L+DA+   +          A   F    P V++ N ++      
Sbjct: 463 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINE 522

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G    A+ L+  M   G+ PD  +Y+ +I GLC    ++EA +    MG     P+ +T+
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + L  G+    ++    ++  ++  +G   D + Y  LI G+ ++GN+   L + + M+S
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 642

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            G   + I    +L+       ++ A+ +L +++   L+ +
Sbjct: 643 SGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQLEDE 683


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 166/541 (30%), Positives = 275/541 (50%), Gaps = 6/541 (1%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           + S +P  V  N++ I+GLC+  +L++A+  L E       P+ V+   +M   CK G  
Sbjct: 172 RKSVSPDIVSYNTL-INGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRM 230

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           + A  L   M K G   D   Y  LI G C  G+++   E  ++M   G+  + +TYS L
Sbjct: 231 DEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCL 290

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G   L Q   A  V+  +   G  PD+VTYT LI G C+ G     + L  +M+ +G 
Sbjct: 291 VHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGE 350

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           + + + Y+VLLS +CK G + +A  +L  M   G K D+VTY+ L++GLC + KV +A++
Sbjct: 351 EPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALK 410

Query: 295 LYNEMCSKR--ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           L+N M      + PN F    ++ GLC++  +T+A      ++      ++V YN+++ G
Sbjct: 411 LFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGG 470

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
            +K G I EA++L++Q+++    P+  T++ LI GFCK   +  A+ L   ++ HGL P+
Sbjct: 471 CLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPA 530

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
              Y T M + C+EG++++  +L QEM      P  +++  +I G  K    Q   +L  
Sbjct: 531 LFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQM 590

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            M  +G+ PD +T++T+I    K  +L +A   L +M      P +  Y+ L+ GL   G
Sbjct: 591 KMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKG 650

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHC---AEGDVHKAMTFFCQMVEKGFEISIR 589
           D      LL  +      L +   +TI+   C    E DV + +  F Q   +G  IS  
Sbjct: 651 DTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCN 710

Query: 590 D 590
           +
Sbjct: 711 E 711



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 161/569 (28%), Positives = 278/569 (48%), Gaps = 17/569 (2%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS  SL+A++  +      ++  G+  L+LK G   + F  NI++ GLC  G + EA+  
Sbjct: 107 PSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGL 166

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +MGR  V PD ++Y+ L  G     ++  A  ++ ++   G  P+ VT T L+ G C+
Sbjct: 167 IREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCK 226

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G ++E ++L E M  +GF  +V+ Y  L+S  C +G +D    L  EM   G+  ++VT
Sbjct: 227 DGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVT 286

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           YS L+ GLC+  +  +A  + N M    I P+   +  ++ GLC+    T A    + ++
Sbjct: 287 YSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMV 346

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                   V YN+++ G  K G + +A ++ R +IEK     +VT+N+L+ G C  GKV 
Sbjct: 347 EKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVD 406

Query: 396 DARRLLDTI--KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           +A +L +++    + LEP+  T+   +   C+EG + + + + ++M  K      VTY +
Sbjct: 407 EALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNM 466

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           ++ G  K  K++EA++L + +  +G  P+  TY+ +I  FCK + L  A  L  +M  H 
Sbjct: 467 LLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 526

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           L P    YN L+  LC  G L+ A  L   +   N     +++ T+I      GD     
Sbjct: 527 LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVK 586

Query: 574 TFFCQMVEKGF---------------EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAF 618
               +MVE G                ++   D  KS    M+++GF PD  + + +L   
Sbjct: 587 ELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGL 646

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              GD   +  L   M   G + D+ +++
Sbjct: 647 SSKGDTTEIINLLHQMAAKGTVLDRKIVS 675



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 152/524 (29%), Positives = 268/524 (51%), Gaps = 2/524 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV+  +IV+ GLC+   + +A+  ++E   K   P +VS N +++  CK    + A GL 
Sbjct: 143 NVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLL 202

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G  P++ +   L+ GLC  G M+EA+E    M + G + D + Y  L  GF   
Sbjct: 203 LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNN 262

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +    ++  ++L KG   ++VTY+ L+ G C++G  +E   +   M   G   +V+ Y
Sbjct: 263 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 322

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+  +CK GR   A+ LL  M   G +P  VTY++L+ GLCK+  V  A ++   M  
Sbjct: 323 TGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIE 382

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQ-DVVLYNIMIDGYVKLGNI 359
           K    +   +  ++ GLC+K  + EA   F+S+    NC++ +V  +N++I G  K G +
Sbjct: 383 KGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRL 442

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +AV+++R++++K    ++VT+N L+ G  K GK+ +A  L   +   G  P++ TY+  
Sbjct: 443 TKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSIL 502

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ +C+   +     L  EM T  + P    Y  ++  LCK+  L++A  L ++M     
Sbjct: 503 IDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANC 562

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD I++NT+I    K  D +   +L  +M    L P + T++ LI+ L   G+L  A  
Sbjct: 563 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKS 622

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            L  +     +   + Y +++K   ++GD  + +    QM  KG
Sbjct: 623 ALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 148/558 (26%), Positives = 263/558 (47%), Gaps = 40/558 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           R G V +A+ +I +M    +   I +YN+L+  L     + +   L  +++ +    N  
Sbjct: 156 RNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSV 215

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + ++DGLC+  R+ +A+  L+    K F   VV    ++S +C  G  +  K LF  M
Sbjct: 216 TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 275

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L  G+  +  +Y+ L+HGLC  G  +EA    N M  HG+ PD +TY+ L  G     + 
Sbjct: 276 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 335

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A  ++  ++ KG +P  VTY VL+ G C+ G V +  K+  +M+ +G K +V+ Y+ L
Sbjct: 336 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 395

Query: 245 LSSMCKSGRIDEALGLLYEM--EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM--- 299
           +  +C  G++DEAL L   M      L+P++ T+++LI GLCK+ ++ KA++++ +M   
Sbjct: 396 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 455

Query: 300 --CSKRIS------------------------------PNSFAHGAILLGLCEKEMITEA 327
             C   ++                              PNSF +  ++ G C+  M+  A
Sbjct: 456 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIA 515

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           +  F  +        +  YN ++    K G++ +A  L++++      P I++FN++I G
Sbjct: 516 KGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG 575

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
             K G     + L   +   GL P A+T++T +N   + G +    + L+ M      P 
Sbjct: 576 TLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPD 635

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            + Y  ++KGL  +    E + LL  M   G   D+   +TI+   C         +LL 
Sbjct: 636 ALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLP 695

Query: 508 QMWLHNLEPTSATYNILI 525
             +    E  S + N L+
Sbjct: 696 TFFQGTSEGASISCNELL 713



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 150/543 (27%), Positives = 248/543 (45%), Gaps = 17/543 (3%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF   L + L P   + N L+  L  + +   A      M    V P   + S L +
Sbjct: 58  AVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIE 117

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F    +    + V+  +L +G   ++    +++ G C+ G V E + L   M  +    
Sbjct: 118 CFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSP 177

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           ++++Y+ L++ +CK+ ++ EA+GLL EMEA G  P+ VT + L+ GLCK  ++ +A++L 
Sbjct: 178 DIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELL 237

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             M  K    +   +G ++ G C    +   +  FD ++      +VV Y+ ++ G  +L
Sbjct: 238 EAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRL 297

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   EA  +   + E  I P +VT+  LI G CK+G+   A  LL+ +   G EPS VTY
Sbjct: 298 GQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTY 357

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              ++  C+EG +     +L+ M  K      VTY  ++KGLC + K+ EA++L   M+ 
Sbjct: 358 NVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFD 417

Query: 477 IG--VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
               + P+  T+N +I   CK   L KA ++  +M          TYN+L+ G    G +
Sbjct: 418 NENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKI 477

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-- 592
           K A  L   + +         Y+ +I   C    ++ A   FC+M   G   ++ DY   
Sbjct: 478 KEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTL 537

Query: 593 -------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                        KS F  M +    PD      M+    + GD   V EL   M++ GL
Sbjct: 538 MASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGL 597

Query: 640 LPD 642
            PD
Sbjct: 598 RPD 600



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 131/315 (41%), Gaps = 37/315 (11%)

Query: 315 LLGLCEK--EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           L  LC+K     TEA   F S +  N +      N ++D   +  N G A  +YR++   
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            + PS  + ++LI  F    K      ++  +   G   +       +   C  G +   
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT------- 485
           + L++EM  K++ P  V+Y  +I GLCK  KL+EAV LL +M   G  P+ +T       
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223

Query: 486 ----------------------------YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
                                       Y T+I  FC   +L +  +L ++M    +   
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             TY+ L+ GLC  G  K A+ +L ++ EH I    V YT +I   C +G    AM    
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 343

Query: 578 QMVEKGFEISIRDYT 592
            MVEKG E S   Y 
Sbjct: 344 LMVEKGEEPSNVTYN 358


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/610 (27%), Positives = 283/610 (46%), Gaps = 32/610 (5%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL+ D+  S    +V     ++  + +  R    I   Q+   K+    + S N ++  +
Sbjct: 65  DLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCF 124

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           C       A   F  + K GLHPD  ++  L+HGLC+   + EAL+F + M      P+ 
Sbjct: 125 CSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNV 184

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LRE 227
           +T++ L  G     +I  A  ++ +++  G  P  +TY  ++ G C+ G+    L  LR+
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
           +        NV+ YS ++ S+CK GR  +A  L  EM+  G+ PDL TY+ +I G C   
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +   A QL  EM  ++ISP+   + A++    ++    EA   +D ++    I + + Y+
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            MIDG+ K   +  A  ++  +  K  SP+++TFN+LI G+C   ++ D   LL  +   
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET 424

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           GL     TY T ++ +   G++   L LLQEM +  + P  VT   ++ GLC   KL++A
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484

Query: 468 VQLLEDMY-----------VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           +++ + M              GV PD  TYN +I          +A +L  +M    + P
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            + TY+ +IDGLC    L  A  +  S+   + S   V +TT+I  +C  G V   +  F
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           C+M  +G   +   Y                      ++  F + G++    ++   MI 
Sbjct: 605 CEMGRRGIVANAITYI--------------------TLICGFRKVGNINGALDIFQEMIS 644

Query: 637 SGLLPDKFLI 646
           SG+ PD   I
Sbjct: 645 SGVYPDTITI 654



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/569 (26%), Positives = 267/569 (46%), Gaps = 15/569 (2%)

Query: 37  LLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGP 96
           ++  +   D++  LY  ++  +   ++Y+ +I+I   C  S+L  A+    +       P
Sbjct: 88  VVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHP 147

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
            VV+   ++   C       A   F  M +    P+  ++  L++GLC  G + EA+   
Sbjct: 148 DVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL-LIKGSDPDIVTYTVLICGYCQ 215
           + M   G++P  ITY  +  G         A  +++K+  +    P++V Y+ +I   C+
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCK 267

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G   +   L   M  +G   ++  Y+ ++   C SGR  +A  LL EM    + PD+VT
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI    K+ K  +A +LY+EM  + I PN+  + +++ G C++  +  A   F  + 
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C  +++ +N +IDGY     I + ++L  ++ E  +     T+N+LI+GF   G + 
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET-----------KAI 444
            A  LL  +   GL P  VT  T ++  C+ G ++  L + + M+              +
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P   TY ++I GL  + K  EA +L E+M   G+ PD ITY+++I   CK   L +A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           + + M   +  P   T+  LI+G C  G + +   L   +    I    + Y T+I    
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 565 AEGDVHKAMTFFCQMVEKGF---EISIRD 590
             G+++ A+  F +M+  G     I+IR+
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRN 656



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 262/547 (47%), Gaps = 50/547 (9%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVID 71
           A+    K+ +L L   + T+ +LL+ L   D +    D +  +  +    NV T + +++
Sbjct: 133 ALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMN 192

Query: 72  GLCQQSRLQDAILFL-----------QETAG-------------------------KEFG 95
           GLC++ R+ +A+  L           Q T G                             
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+VV  +AI+   CK G    A+ LF  M + G+ PD F+YN +I G C +G   +A + 
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M    + PD +TY+ L   F    +   A ++  ++L +G  P+ +TY+ +I G+C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              ++    +  +M ++G   N+I ++ L+   C + RID+ + LL+EM   GL  D  T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G      ++ A+ L  EM S  + P+      +L GLC+   + +A   F  + 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 336 MS----------NCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            S          N ++ DV  YNI+I G +  G   EA +LY ++  + I P  +T++S+
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G CK  ++ +A ++ D++      P+ VT+TT +N YC+ G +   L L  EM  + I
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
               +TY  +I G  K   +  A+ + ++M   GV PD IT   ++      ++L++A  
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA 672

Query: 505 LLNQMWL 511
           +L ++ +
Sbjct: 673 MLEKLQM 679



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 212/414 (51%), Gaps = 16/414 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
           + G   DA  +  +M+E  +   + TYNS++       R +D    L + ++   +P +V
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP-DV 325

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +I+   ++ +  +A     E   +   P+ ++ ++++  +CK    + A+ +F L
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G  P+  ++N LI G C A  +++ +E  ++M   G+  D  TY+ L  GF+L+  
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS-----------Q 232
           ++ A  ++Q+++  G  PDIVT   L+ G C  G +++ L++ +VM              
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G + +V  Y++L+S +   G+  EA  L  EM   G+ PD +TYS +I GLCKQ ++ +A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            Q+++ M SK  SPN      ++ G C+   + +    F  +     + + + Y  +I G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           + K+GNI  A+ +++++I   + P  +T  +++ G     ++  A  +L+ +++
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 176/383 (45%), Gaps = 53/383 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           +  +G   DA  ++ +M E  +   + TYN+L+         ++   LYD++       N
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T S +IDG C+Q+RL  A       A K   P++++ N ++  YC  G   +  G+  
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC--GAKRIDDGMEL 417

Query: 123 L--MLKYGLHPDAFSYNILIHG-----------------------------------LCI 145
           L  M + GL  D  +YN LIHG                                   LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 146 AGSMEEALEFTNDMGR-----------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
            G +++ALE    M +           +GVEPD  TY+IL  G     +   A ++ +++
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             +G  PD +TY+ +I G C+   ++E  ++ + M S+ F  NV+ ++ L++  CK+GR+
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D+ L L  EM   G+  + +TY  LI G  K   ++ A+ ++ EM S  + P++     +
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 315 LLGLCEKEMITEARMYFDSLIMS 337
           L GL  KE +  A    + L MS
Sbjct: 658 LTGLWSKEELKRAVAMLEKLQMS 680



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 127/292 (43%), Gaps = 21/292 (7%)

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G+ ++  + +A+ L+  ++  R  PS+V F  L+    +  +      L   ++   +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
              ++   +  +C    +   L+   ++    + P  VT+T ++ GLC + ++ EA+   
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
             M+     P+ +T+ T++   C+   + +A  LL++M    L+PT  TY  ++DG+C  
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 532 GDLKNADCLLVSLQE-HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
           GD  +A  LL  ++E  +I    V Y+ II + C +G    A   F +M EKG       
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF----- 287

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                          PD      M++ F   G      +L   M++  + PD
Sbjct: 288 ---------------PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 159/566 (28%), Positives = 280/566 (49%), Gaps = 22/566 (3%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E P +VY  + +I  LC++ R  DA   L+          V + N +++ YC+ G  + A
Sbjct: 74  EAP-DVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 132

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   M    + PDA++Y  +I GLC  G + EAL   +DM   G +P  +TY++L + 
Sbjct: 133 RRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 189

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
               +    A +V+ ++  KG  P+IVTY V+I G C+ G V++  +    + S GF+ +
Sbjct: 190 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 249

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            ++Y+ +L  +C + R ++   L  EM      P+ VT+ +L+R  C+   V +AIQ+  
Sbjct: 250 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLE 309

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M     + N+     ++  +C++  + +A  + +++    C  D + Y  ++ G  +  
Sbjct: 310 QMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAE 369

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
              +A +L ++++ K   P+ VTFN+ I   C+ G +  A  L++ +  HG E + VTY 
Sbjct: 370 RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYN 429

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N +C +G +   L L   M  K   P  +TYT ++ GLC   +L  A +LL +M   
Sbjct: 430 ALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQK 486

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
              P+ +T+N ++  FC+   + +A +L+ QM  H   P   TYN L+DG+  + + + A
Sbjct: 487 DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEA 546

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---- 593
             LL  L  + +S   V Y++II     E  V +A+  F  + + G       Y K    
Sbjct: 547 LELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLA 606

Query: 594 -----------SFFCMMLSNGFPPDQ 608
                       FF  M+SNG  P++
Sbjct: 607 LCKRCNTDGAIDFFAYMVSNGCMPNE 632



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 143/580 (24%), Positives = 288/580 (49%), Gaps = 11/580 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           R G   DA  V+   +     V +  YN+L+         D    L   + V+    + Y
Sbjct: 90  RRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAP---DAY 146

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK-LGFAEVAKGLFCL 123
           T + +I GLC + R+ +A+  L +   +   PSVV+   ++   CK  GF +  + L  +
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
             K G  P+  +YN++I+G+C  G +++A EF N +  +G +PD ++Y+ + KG     +
Sbjct: 207 RAK-GCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 265

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
                ++  +++ K   P+ VT+ +L+  +C+ G VE  +++ E M   G   N    ++
Sbjct: 266 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +++++CK GR+D+A   L  M + G  PD ++Y+ +++GLC+ ++   A +L  EM  K 
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN       +  LC+K +I +A M  + +    C  ++V YN +++G+   G +  A+
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L+  +  K   P+ +T+ +L+ G C   ++  A  LL  +      P+ VT+   ++ +
Sbjct: 446 ELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++G +   + L+++M      P  +TY  ++ G+ K    +EA++LL  +   GV+PD 
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 562

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TY++II    +   + +A ++ + +    + P +  YN ++  LC   +   A      
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 622

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +  +     ++ Y T+I+    E  + +      ++  +G
Sbjct: 623 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 238/493 (48%), Gaps = 11/493 (2%)

Query: 95  GPSVVSLNAIMSRYCKL----GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
            PS  S N   +R  +L      AE A+ L       G  PD +    LI  LC  G   
Sbjct: 37  APSASSPNPANARLRRLIARDDLAEAAR-LVDRATSRGEAPDVYLCTKLIRNLCRRGRTS 95

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           +A        R G   D   Y+ L  G+    Q+  A ++I  + +    PD  TYT +I
Sbjct: 96  DAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPII 152

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C  G V E L L + ML +G + +V+ Y+VLL ++CKS    +A+ +L EM A G  
Sbjct: 153 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 212

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P++VTY+++I G+C++ +V  A +  N + S    P++ ++  +L GLC  +   +    
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           F  ++  NC+ + V +++++  + + G +  A+Q+  Q+     + +    N +I   CK
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G+V DA + L+ +  +G  P  ++YTT +   C     +    LL+EM  K   P  VT
Sbjct: 333 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 392

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           +   I  LC++  +++A  L+E M   G   + +TYN ++  FC    +  A +L   M 
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM- 451

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
               +P + TY  L+ GLC    L  A  LL  + + + +   V +  ++   C +G + 
Sbjct: 452 --PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 509

Query: 571 KAMTFFCQMVEKG 583
           +A+    QM+E G
Sbjct: 510 EAIELVEQMMEHG 522



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 246/508 (48%), Gaps = 41/508 (8%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVYTN 66
           G V +A+ ++  M     + S+ TY  LL  + + T      ++ D+++      N+ T 
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 218

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +++I+G+C++ R+ DA  FL   +   F P  VS   ++   C     E  + LF  M++
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278

Query: 127 YGLHPDAFSY-----------------------------------NILIHGLCIAGSMEE 151
               P+  ++                                   NI+I+ +C  G +++
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A +F N+MG +G  PD I+Y+ + KG     +   A +++++++ K   P+ VT+   IC
Sbjct: 339 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
             CQ G +E+   L E M   G ++N++ Y+ L++  C  GR+D AL L Y M     KP
Sbjct: 399 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KP 455

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           + +TY+ L+ GLC  +++  A +L  EM  K  +PN      ++   C+K ++ EA    
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 515

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           + ++   C  +++ YN ++DG  K  N  EA++L   L+   +SP IVT++S+I    + 
Sbjct: 516 EQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSRE 575

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
            +V +A ++   ++  G+ P AV Y   + A C+  N    +     M +    P  +TY
Sbjct: 576 DRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY 635

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
             +I+GL  +  L+E   LL ++   GV
Sbjct: 636 ITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 215/476 (45%), Gaps = 15/476 (3%)

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           ++ A +++ +   +G  PD+   T LI   C+ G   +  ++       G  ++V AY+ 
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++  C+ G++D A  L+  M    + PD  TY+ +IRGLC + +V +A+ L ++M  + 
Sbjct: 119 LVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+   +  +L  +C+     +A    D +    C  ++V YN++I+G  + G + +A 
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +   +L      P  V++ +++ G C   +  D   L   +      P+ VT+   +  +
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C  G ++R + +L++M             +VI  +CKQ ++ +A Q L +M   G +PD 
Sbjct: 296 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           I+Y T+++  C+ +    A +LL +M   N  P   T+N  I  LC  G ++ A  L+  
Sbjct: 356 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 415

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR------------DY 591
           + EH   +  V Y  ++   C +G V  A+  F  M  K   I+              D 
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDA 475

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                  ML     P+     V++  F Q G +    EL   M++ G  P+    N
Sbjct: 476 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYN 531



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 192/377 (50%), Gaps = 6/377 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           ML   + R GMV  A+ V+ +M       +    N ++  +      D  +   +++   
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +  + + V+ GLC+  R +DA   L+E   K   P+ V+ N  +   C+ G  E A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M ++G   +  +YN L++G C+ G ++ ALE    M     +P+ ITY+ L  G
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTG 466

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A +++ ++L K   P++VT+ VL+  +CQ G ++E ++L E M+  G   N
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +I Y+ LL  + K    +EAL LL+ + + G+ PD+VTYS +I  L ++D+V +AI++++
Sbjct: 527 LITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 586

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            +    + P +  +  ILL LC++     A  +F  ++ + C+ + + Y  +I+G     
Sbjct: 587 IVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANED 646

Query: 358 NIGEAVQLYRQLIEKRI 374
            + E   L R+L  + +
Sbjct: 647 FLKETRDLLRELCSRGV 663



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 144/313 (46%), Gaps = 3/313 (0%)

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           +R L  +D + +A +L +   S+  +P+ +    ++  LC +   ++A     +   S  
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             DV  YN ++ GY + G +  A +L   +    ++P   T+  +I G C  G+V +A  
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALS 166

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           LLD +   G +PS VTYT  + A C+     + + +L EM  K   P  VTY V+I G+C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           ++ ++ +A + L  +   G  PD ++Y T+++  C  K      +L  +M   N  P   
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           T+++L+   C  G ++ A  +L  +  H  +        +I   C +G V  A  F   M
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 580 VEKGFEISIRDYT 592
              G       YT
Sbjct: 347 GSYGCSPDTISYT 359



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 137/312 (43%), Gaps = 20/312 (6%)

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N  +   +   ++ EA +L  +   +  +P +     LI   C+ G+ +DA R+L   + 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G       Y T +  YC  G +     L+  M    + P   TYT +I+GLC + ++ E
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A+ LL+DM   G  P  +TY  ++ + CK     +A ++L++M      P   TYN++I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF-- 584
           G+C  G + +A   L  L  +      V+YTT++K  CA          F +M+EK    
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 585 -EISIRDYTKSFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
            E++  D    FFC              M  +G   +  +C +++    + G +   F+ 
Sbjct: 284 NEVTF-DMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 342

Query: 631 AAVMIKSGLLPD 642
              M   G  PD
Sbjct: 343 LNNMGSYGCSPD 354


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 166/620 (26%), Positives = 289/620 (46%), Gaps = 36/620 (5%)

Query: 39  YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSV 98
           Y ++  +   DL+ D+  S    +V   + ++  + +  R    I   Q+   K+    +
Sbjct: 57  YEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDI 116

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
            S   ++  +C       A   F  + K GLHPD  ++  L+HGLC+   + EAL+  + 
Sbjct: 117 YSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQ 176

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           + R    PD +T++ L  G     ++  A  ++ +++  G  PD +TY   + G C++G+
Sbjct: 177 ICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGD 232

Query: 219 VEEGLK-LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
               L  LR++      K NV+ YS ++  +CK GR  ++  L  EM+  G+ P++VTY+
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN 292

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            +I G C   +   A +L  EM  ++ISPN   + A++    ++    EA   +D ++  
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
             I + + YN MIDG+ K   +  A  ++  +  K  SP + TF +LI G+C   ++ D 
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 412

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             LL  +   GL  + VTY T ++ +C  G++   L L Q+M +  + P  VT   ++ G
Sbjct: 413 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 472

Query: 458 LCKQWKLQEAVQLLEDMY-----------VIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
           LC   KL++A+++ + M              GV PD +TYN +I          +A +L 
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELY 532

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +M    + P + TY+ +IDGLC    L  A  + VS+   + S   V + T+I  +C  
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA 592

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
           G V   +  FC+M  +                    G   D  I   ++  F + G++  
Sbjct: 593 GRVDDGLELFCEMGRR--------------------GIVADAIIYITLIYGFRKVGNING 632

Query: 627 VFELAAVMIKSGLLPDKFLI 646
             ++   MI SG+ PD   I
Sbjct: 633 ALDIFQEMISSGVYPDTITI 652



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 160/603 (26%), Positives = 286/603 (47%), Gaps = 22/603 (3%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           + DA+ + + M       S+  +N L+     +   D++  LY  ++  +   ++Y+ +I
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I   C  S+L  A+    +       P VV+   ++   C       A  LF  + +  
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  ++  L++GLC  G + EA+   + M  +G++PD ITY     G   +     A 
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 189 KVIQKLL-IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            +++K+  I    P++V Y+ +I G C+ G   +   L   M  +G   N++ Y+ ++  
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            C SGR   A  LL EM    + P++VTY+ LI    K+ K  +A +LY+EM  + I PN
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           +  + +++ G C+++ +  A   F  +    C  DV  +  +IDGY     I + ++L  
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++  + +  + VT+N+LI+GFC  G +  A  L   +   G+ P  VT  T ++  C+ G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 428 NIQRLLALLQEMET-----------KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            ++  L + + M+              + P  +TY ++I GL  + K  EA +L E+M  
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 537

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+ PD ITY+++I   CK   L +A Q+   M   +  P   T+N LI+G C  G + +
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 597

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF---EISIRDYTK 593
              L   +    I    + Y T+I      G+++ A+  F +M+  G     I+IR+   
Sbjct: 598 GLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 657

Query: 594 SFF 596
            F+
Sbjct: 658 GFW 660



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 239/488 (48%), Gaps = 27/488 (5%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDI----------KVS 57
           R G V +AV ++ +M E  L+    TY + +      D M  + D +          ++S
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFV------DGMCKMGDTVSALNLLRKMEEIS 247

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NV   S +IDGLC+  R  D+     E   K   P++V+ N ++  +C  G    A
Sbjct: 248 HIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAA 307

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   ML+  + P+  +YN LI+     G   EA E  ++M   G+ P+ ITY+ +  G
Sbjct: 308 QRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 367

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    ++  A  +   +  KG  PD+ T+T LI GYC    +++G++L   M  +G   N
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + Y+ L+   C  G ++ AL L  +M + G+ PD+VT + L+ GLC   K+  A++++ 
Sbjct: 428 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 487

Query: 298 EMCSKR-----------ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            M   +           + P+   +  ++ GL  +    EA   ++ +     + D + Y
Sbjct: 488 AMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           + MIDG  K   + EA Q++  +  K  SP++VTFN+LI G+CK G+V D   L   +  
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 607

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+   A+ Y T +  + + GNI   L + QEM +  + P  +T   ++ G   + +L+ 
Sbjct: 608 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELER 667

Query: 467 AVQLLEDM 474
           AV +LED+
Sbjct: 668 AVAMLEDL 675



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 134/546 (24%), Positives = 258/546 (47%), Gaps = 19/546 (3%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A+    K+ +L L   + T+ +LL+ L          DL+  I       +V T + +++
Sbjct: 135 ALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMN 190

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LH 130
           GLC++ R+ +A+  L         P  ++    +   CK+G    A  L   M +   + 
Sbjct: 191 GLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIK 250

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+   Y+ +I GLC  G   ++     +M   G+ P+ +TY+ +  GF +  + S A ++
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           +Q++L +   P++VTY  LI  + + G   E  +L + ML +G   N I Y+ ++   CK
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             R+D A  + Y M   G  PD+ T++ LI G C   ++   ++L +EM  + +  N+  
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C    +  A      +I S    D+V  N ++DG    G + +A+++++ + 
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 371 EKR-----------ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           + +           + P ++T+N LI G    GK  +A  L + +   G+ P  +TY++ 
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C++  +     +   M +K+  P  VT+  +I G CK  ++ + ++L  +M   G+
Sbjct: 551 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 610

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             D I Y T+I  F K  ++  A  +  +M    + P + T   ++ G     +L+ A  
Sbjct: 611 VADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVA 670

Query: 540 LLVSLQ 545
           +L  LQ
Sbjct: 671 MLEDLQ 676



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 216/467 (46%), Gaps = 25/467 (5%)

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L  G + +  +  A  +   +L     P ++ +  L+    ++   +  + L + M  + 
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            + ++ ++++L+   C   ++  AL    ++  +GL PD+VT++ L+ GLC   +V +A+
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            L++++C     P+      ++ GLC +  + EA    D ++ +    D + Y   +DG 
Sbjct: 172 DLFHQIC----RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 354 VKLGNIGEAVQLYRQLIE-KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
            K+G+   A+ L R++ E   I P++V ++++I G CK+G+ +D+  L   ++  G+ P+
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            VTY   +  +C  G       LLQEM  + I P  VTY  +I    K+ K  EA +L +
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +M   G+ P+ ITYN++I  FCK   L  A  +   M      P   T+  LIDG C   
Sbjct: 348 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 407

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            + +   LL  +    +    V Y T+I   C  GD++ A+    QM+            
Sbjct: 408 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI------------ 455

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                   S+G  PD   C  +L      G L    E+   M KS +
Sbjct: 456 --------SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 239/450 (53%), Gaps = 19/450 (4%)

Query: 8   RTGMVHDAVFVIAKMKELD-LKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRN 62
           + G    A+ ++ KM+E+  +K ++  Y++++  L    RH+D   +L+ +++      N
Sbjct: 229 KMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD-SHNLFIEMQDKGIFPN 287

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEVAKGLF 121
           + T + +I G C   R   A   LQE   ++  P+VV+ NA+++ + K G F E A+ L+
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAE-LY 346

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  G+ P+  +YN +I G C    ++ A +    M   G  PD  T++ L  G+   
Sbjct: 347 DEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 406

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I    +++ ++  +G   + VTY  LI G+C +G++   L L + M+S G   +++  
Sbjct: 407 KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 466

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAV-----------GLKPDLVTYSILIRGLCKQDKVH 290
           + LL  +C +G++ +AL +   M+             G++PD++TY+ILI GL  + K  
Sbjct: 467 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFL 526

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A +LY EM  + I P++  + +++ GLC++  + EA   F S+   +   +VV +N +I
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           +GY K G + + ++L+ ++  + I    + + +LIYGF K G +  A  +   +   G+ 
Sbjct: 587 NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVY 646

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           P  +T    +  +  +  ++R +A+L++++
Sbjct: 647 PDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 157/319 (49%), Gaps = 14/319 (4%)

Query: 33  TYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYNS++         D   D++  +       +V+T + +IDG C   R+ D +  L E 
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             +    + V+ N ++  +C +G    A  L   M+  G+ PD  + N L+ GLC  G +
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479

Query: 150 EEALEFTNDMGR-----------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           ++ALE    M +           +GVEPD +TY+IL  G     +   A ++ +++  +G
Sbjct: 480 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 539

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD +TY+ +I G C+   ++E  ++   M S+ F  NV+ ++ L++  CK+GR+D+ L
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 599

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L  EM   G+  D + Y  LI G  K   ++ A+ ++ EM S  + P++     +L G 
Sbjct: 600 ELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 659

Query: 319 CEKEMITEARMYFDSLIMS 337
             KE +  A    + L MS
Sbjct: 660 WSKEELERAVAMLEDLQMS 678


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 166/541 (30%), Positives = 275/541 (50%), Gaps = 6/541 (1%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           + S +P  V  N++ I+GLC+  +L++A+  L E       P+ V+   +M   CK G  
Sbjct: 26  RKSVSPDIVSYNTL-INGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRM 84

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           + A  L   M K G   D   Y  LI G C  G+++   E  ++M   G+  + +TYS L
Sbjct: 85  DEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCL 144

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G   L Q   A  V+  +   G  PD+VTYT LI G C+ G     + L  +M+ +G 
Sbjct: 145 VHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGE 204

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           + + + Y+VLLS +CK G + +A  +L  M   G K D+VTY+ L++GLC + KV +A++
Sbjct: 205 EPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALK 264

Query: 295 LYNEMCSKR--ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           L+N M      + PN F    ++ GLC++  +T+A      ++      ++V YN+++ G
Sbjct: 265 LFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGG 324

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
            +K G I EA++L++Q+++    P+  T++ LI GFCK   +  A+ L   ++ HGL P+
Sbjct: 325 CLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPA 384

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
              Y T M + C+EG++++  +L QEM      P  +++  +I G  K    Q   +L  
Sbjct: 385 LFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQM 444

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            M  +G+ PD +T++T+I    K  +L +A   L +M      P +  Y+ L+ GL   G
Sbjct: 445 KMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKG 504

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHC---AEGDVHKAMTFFCQMVEKGFEISIR 589
           D      LL  +      L +   +TI+   C    E DV + +  F Q   +G  IS  
Sbjct: 505 DTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCN 564

Query: 590 D 590
           +
Sbjct: 565 E 565



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 159/549 (28%), Positives = 267/549 (48%), Gaps = 22/549 (4%)

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
           +N ++   C+ G    A GL   M +  + PD  SYN LI+GLC A  ++EA+    +M 
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
             G  P+++T + L  G     ++  A ++++ +  KG D D+V Y  LI G+C  GN++
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
            G +L + ML +G   NV+ YS L+  +C+ G+  EA  +L  M   G+ PD+VTY+ LI
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
            GLCK  +   A+ L N M  K   P++  +  +L GLC++ ++ +A      +I     
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR--ISPSIVTFNSLIYGFCKNGKVADAR 398
            DVV YN ++ G    G + EA++L+  + +    + P++ TFN LI G CK G++  A 
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 300

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           ++   +   G   + VTY   +    + G I+  + L +++      P   TY+++I G 
Sbjct: 301 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK   L  A  L  +M   G+ P    YNT++ S CK   L +A  L  +M   N EP  
Sbjct: 361 CKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDI 420

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            ++N +IDG    GD +    L + + E  +    + ++T+I      G++         
Sbjct: 421 ISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGEL--------- 471

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
                      D  KS    M+++GF PD  + + +L      GD   +  L   M   G
Sbjct: 472 -----------DEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520

Query: 639 LLPDKFLIN 647
            + D+ +++
Sbjct: 521 TVLDRKIVS 529



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 265/519 (51%), Gaps = 2/519 (0%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +IV+ GLC+   + +A+  ++E   K   P +VS N +++  CK    + A GL   M  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  P++ +   L+ GLC  G M+EA+E    M + G + D + Y  L  GF     +  
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
             ++  ++L KG   ++VTY+ L+ G C++G  +E   +   M   G   +V+ Y+ L+ 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CK GR   A+ LL  M   G +P  VTY++L+ GLCK+  V  A ++   M  K    
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQ 364
           +   +  ++ GLC+K  + EA   F+S+    NC++ +V  +N++I G  K G + +AV+
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           ++R++++K    ++VT+N L+ G  K GK+ +A  L   +   G  P++ TY+  ++ +C
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 361

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +   +     L  EM T  + P    Y  ++  LCK+  L++A  L ++M      PD I
Sbjct: 362 KMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDII 421

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           ++NT+I    K  D +   +L  +M    L P + T++ LI+ L   G+L  A   L  +
Sbjct: 422 SFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERM 481

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
                +   + Y +++K   ++GD  + +    QM  KG
Sbjct: 482 VASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 148/558 (26%), Positives = 263/558 (47%), Gaps = 40/558 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           R G V +A+ +I +M    +   I +YN+L+  L     + +   L  +++ +    N  
Sbjct: 10  RNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSV 69

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + ++DGLC+  R+ +A+  L+    K F   VV    ++S +C  G  +  K LF  M
Sbjct: 70  TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 129

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L  G+  +  +Y+ L+HGLC  G  +EA    N M  HG+ PD +TY+ L  G     + 
Sbjct: 130 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 189

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A  ++  ++ KG +P  VTY VL+ G C+ G V +  K+  +M+ +G K +V+ Y+ L
Sbjct: 190 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 249

Query: 245 LSSMCKSGRIDEALGLLYEM--EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM--- 299
           +  +C  G++DEAL L   M      L+P++ T+++LI GLCK+ ++ KA++++ +M   
Sbjct: 250 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 309

Query: 300 --CSKRIS------------------------------PNSFAHGAILLGLCEKEMITEA 327
             C   ++                              PNSF +  ++ G C+  M+  A
Sbjct: 310 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIA 369

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           +  F  +        +  YN ++    K G++ +A  L++++      P I++FN++I G
Sbjct: 370 KGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG 429

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
             K G     + L   +   GL P A+T++T +N   + G +    + L+ M      P 
Sbjct: 430 TLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPD 489

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            + Y  ++KGL  +    E + LL  M   G   D+   +TI+   C         +LL 
Sbjct: 490 ALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLP 549

Query: 508 QMWLHNLEPTSATYNILI 525
             +    E  S + N L+
Sbjct: 550 TFFQGTSEGASISCNELL 567


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 158/516 (30%), Positives = 264/516 (51%), Gaps = 1/516 (0%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I+ +GL    +L DAI            PS+   N ++S   K+   ++   L   M + 
Sbjct: 56  ILRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+  + ++YNILI+  C    +  AL     M + G EP  +T S L  G+    +IS A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             ++ +++  G  PD +T+T LI G        E + L + M+ +G + N++ Y V+++ 
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK G ID A  LL +MEA  ++ ++V YS +I  LCK      A+ L+ EM +K + PN
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              + +++  LC  E  ++A      +I      +VV +N +ID +VK G + EA +LY 
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++I++ I P I T++SLI GFC + ++ +A+ + + +      P+ VTY T +N +C+  
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            I   + L +EM  + +    VTYT +I G  +      A  + + M   GV P+ +TYN
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           T++   CK   L KA  +   +    +EPT  TYNI+I+G+C  G +++   L  SL   
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +    + Y T+I   C +G   +A   F +M E G
Sbjct: 535 GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570



 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 275/510 (53%), Gaps = 3/510 (0%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DA+ +   M +     SI  +N LL     ++  D++  L + ++      N+YT +I+I
Sbjct: 68  DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +  C++S++  A+  L +     + PS+V+L+++++ YC       A  L   M++ G  
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD  ++  LIHGL +     EA+   + M + G +P+ +TY ++  G      I  A+ +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           + K+     + ++V Y+ +I   C+  + ++ L L   M ++G + NVI YS L+S +C 
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             R  +A  LL +M    + P++VT++ LI    K+ K+ +A +LY+EM  + I P+ F 
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + +++ G C  + + EA+  F+ +I  +C  +VV YN +I+G+ K   I E V+L+R++ 
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           ++ +  + VT+ +LI+GF +     +A+ +   +   G+ P+ +TY T ++  C+ G ++
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           + + + + ++   + PT  TY ++I+G+CK  K+++   L   + + GV PD I YNT+I
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             FC+     +A  L  +M      P S T
Sbjct: 548 SGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 145/573 (25%), Positives = 252/573 (43%), Gaps = 35/573 (6%)

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFA-EVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
           LQ        PS + L  +    C  G A     G +  +L+ GLH              
Sbjct: 21  LQGKGNPRIAPSSIDLCGM----CYWGRAFSSGSGDYREILRNGLH-------------- 62

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
            +  +++A+     M +    P    ++ L      + +      + +K+   G   ++ 
Sbjct: 63  -SMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TY +LI  +C+   +   L L   M+  G++ +++  S LL+  C   RI +A+ L+ +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
             +G +PD +T++ LI GL   +K  +A+ L + M  +   PN   +G ++ GLC++  I
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
             A    + +  +    +VV+Y+ +ID   K  +  +A+ L+ ++  K + P+++T++SL
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I   C   + +DA RLL  +    + P+ VT+   ++A+ +EG +     L  EM  ++I
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P   TY+ +I G C   +L EA  + E M      P+ +TYNT+I  FCK K + +  +
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           L  +M    L   + TY  LI G     D  NA  +   +    +    + Y T++   C
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQE 609
             G + KAM  F  +     E +I  Y                   FC +   G  PD  
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           I   M+  F + G       L   M + G LPD
Sbjct: 542 IYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 162/597 (27%), Positives = 296/597 (49%), Gaps = 4/597 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRN 62
           Y R G V +AV V  +M   D + ++ +YN   S+L +  + D    +Y  ++      +
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPD 145

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VY+ +I +   C+ SR   A+  L   + +    +VV+   ++  + +  F +    LF 
Sbjct: 146 VYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFG 205

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML  G+     ++N L+H LC  G ++E  +  + + + GV P+  TY+   +G     
Sbjct: 206 KMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKG 265

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A +++ +L+ +G  PD+VTY  LI G C+    +E       ++++G + +   Y+
Sbjct: 266 ELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYN 325

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++  CK G +  A  +L      G  PD  TY  LI GLC + + ++A+ L+NE   K
Sbjct: 326 TLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I PN   +  ++ GL  + +I EA      +     I +V  +NI+++G  K+G + +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L + +I K   P I TFN LI+G+    K+ +A  +LD +  +G++P   TY + +N 
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNG 505

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+    + ++   + M  K   P   T+ ++++ LC+  KL +A+ LLE+M    V PD
Sbjct: 506 LCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPD 565

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMW-LHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
            +T+ T+I  FCK  DL  A+ L  +M  ++ +  ++ TYNI+I       ++  A+ L 
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLF 625

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
             + +  +      Y  ++   C  G+V     F  +M+E GF  S+    +   C+
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCL 682



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 161/642 (25%), Positives = 300/642 (46%), Gaps = 26/642 (4%)

Query: 23  KELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQ 75
           KE   K ++ TY S++  L          +++ D+  ++  +     VY  ++   G  +
Sbjct: 32  KEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVG-NHMLEGVYVGAMKNYG--R 88

Query: 76  QSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFS 135
           + ++Q+A+   +     +  P+V S NAIMS     G+ + A  ++  M   G+ PD +S
Sbjct: 89  KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYS 148

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           + I +   C       AL   N+M   G E + + Y  +  GF+  +     +++  K+L
Sbjct: 149 FTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKML 208

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
             G    + T+  L+   C+ G+V+E  KL + ++ +G   N+  Y+  +  +C+ G +D
Sbjct: 209 ASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELD 268

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
            A+ ++  +   G KPD+VTY+ LI GLCK  K  +A     ++ ++ + P+SF +  ++
Sbjct: 269 AAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLI 328

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            G C+  M+  A     + + +  + D   Y  +IDG    G    A+ L+ + + K I 
Sbjct: 329 AGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+++ +N+LI G    G + +A +L   +   GL P   T+   +N  C+ G +     L
Sbjct: 389 PNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           ++ M +K   P   T+ ++I G   Q K++ A+++L+ M   GV PD  TYN+++   CK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCK 508

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
                   +    M      P   T+NIL++ LC    L  A  LL  ++  +++   V 
Sbjct: 509 TSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVT 568

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVE--------KGFEISIRDYT--------KSFFCMM 599
           + T+I   C  GD+  A T F +M E          + I I  +T        +  F  M
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEM 628

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           +     PD     +M+  F + G++   ++    M+++G +P
Sbjct: 629 VDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIP 670



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 236/475 (49%), Gaps = 7/475 (1%)

Query: 56  VSETPR-NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           + + P+ +V T + +I GLC+ S+ Q+A ++L +   +   P   + N +++ YCK G  
Sbjct: 278 IDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMV 337

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           ++A+ +    +  G  PD F+Y  LI GLC  G    AL   N+    G++P+ I Y+ L
Sbjct: 338 QLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
            KG      I  A ++  ++  KG  P++ T+ +L+ G C++G V +   L +VM+S+G+
Sbjct: 398 IKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             ++  +++L+       +++ AL +L  M   G+ PD+ TY+ L+ GLCK  K    ++
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVME 517

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
            Y  M  K  +PN F    +L  LC    + +A    + +   +   D V +  +IDG+ 
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFC 577

Query: 355 KLGNIGEAVQLYRQLIE-KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           K G++  A  L+R++ E   +S S  T+N +I+ F +   V  A +L   +    L P  
Sbjct: 578 KNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            TY   ++ +C+ GN+      L EM      P+  T   VI  LC + ++ EA  ++  
Sbjct: 638 YTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHR 697

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           M   G+ P+ +  NTI   F   K    A +L+ +  L     T   Y +L DGL
Sbjct: 698 MVQKGLVPEAV--NTI---FDHDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGL 747



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 233/518 (44%), Gaps = 29/518 (5%)

Query: 135 SYNILIHGLCIAG---SMEEAL-EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           +Y  +I  L + G   +MEE L +   ++G H +E     Y    K +    ++  A  V
Sbjct: 42  TYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEG---VYVGAMKNYGRKGKVQEAVNV 98

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
            +++     +P + +Y  ++      G  ++  K+   M  +G   +V ++++ + S C+
Sbjct: 99  FERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCR 158

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           + R   AL LL  M + G + ++V Y  ++ G  +++   +  +L+ +M +  +S     
Sbjct: 159 TSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLST 218

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
              +L  LC+K  + E     D +I    + ++  YN  I G  + G +  AV++  +LI
Sbjct: 219 FNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLI 278

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           ++   P +VT+N LIYG CKN K  +A   L  +   GLEP + TY T +  YC+ G +Q
Sbjct: 279 DQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQ 338

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               +L         P   TY  +I GLC + +   A+ L  +    G+ P+ I YNT+I
Sbjct: 339 LAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
           +       + +A QL ++M    L P   T+NIL++GLC  G + +AD L          
Sbjct: 399 KGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL---------- 448

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR-DYTKSFFCMMLSNGFPPDQE 609
                    +K   ++G      TF   ++  G+   ++ +       +M+ NG  PD  
Sbjct: 449 ---------VKVMISKGYFPDIFTF--NILIHGYSTQLKMENALEILDVMMDNGVDPDVY 497

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               +L    +      V E    M++ G  P+ F  N
Sbjct: 498 TYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFN 535



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 140/308 (45%), Gaps = 39/308 (12%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP---RNV 63
           S  G++ +A  + ++M E  L   +QT+N L+  L     + D    +KV  +     ++
Sbjct: 402 SNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T +I+I G   Q ++++A+  L         P V + N++++  CK    E     +  
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKT 521

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M++ G  P+ F++NIL+  LC    +++AL    +M    V PDA+T+  L  GF     
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 184 ISGAW------------------------------------KVIQKLLIKGSDPDIVTYT 207
           + GA+                                    K+ Q+++ +   PD  TY 
Sbjct: 582 LDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +++ G+C+ GNV+ G K    M+  GF  ++     +++ +C   R+ EA G+++ M   
Sbjct: 642 LMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701

Query: 268 GLKPDLVT 275
           GL P+ V 
Sbjct: 702 GLVPEAVN 709


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 159/566 (28%), Positives = 280/566 (49%), Gaps = 22/566 (3%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E P +VY  + +I  LC++ R  DA   L+          V + N +++ YC+ G  + A
Sbjct: 74  EAP-DVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 132

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   M    + PDA++Y  +I GLC  G + EAL   +DM   G +P  +TY++L + 
Sbjct: 133 RRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 189

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
               +    A +V+ ++  KG  P+IVTY V+I G C+ G V++  +    + S GF+ +
Sbjct: 190 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 249

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            ++Y+ +L  +C + R ++   L  EM      P+ VT+ +L+R  C+   V +AIQ+  
Sbjct: 250 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLE 309

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M     + N+     ++  +C++  + +A  + +++    C  D + Y  ++ G  +  
Sbjct: 310 QMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAE 369

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
              +A +L ++++ K   P+ VTFN+ I   C+ G +  A  L++ +  HG E + VTY 
Sbjct: 370 RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYN 429

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N +C +G +   L L   M  K   P  +TYT ++ GLC   +L  A +LL +M   
Sbjct: 430 ALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQK 486

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
              P+ +T+N ++  FC+   + +A +L+ QM  H   P   TYN L+DG+  + + + A
Sbjct: 487 DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEA 546

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---- 593
             LL  L  + +S   V Y++II     E  V +A+  F  + + G       Y K    
Sbjct: 547 LELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLA 606

Query: 594 -----------SFFCMMLSNGFPPDQ 608
                       FF  M+SNG  P++
Sbjct: 607 LCKRCNTDGAIDFFAYMVSNGCMPNE 632



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 142/580 (24%), Positives = 287/580 (49%), Gaps = 11/580 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           R G   DA  V+   +     V +  YN+L+         D    L   + V+    + Y
Sbjct: 90  RRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAP---DAY 146

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK-LGFAEVAKGLFCL 123
           T + +I GLC + R+ +A+  L +   +   PSVV+   ++   CK  GF +  + L  +
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
             K G  P+  +YN++I+G+C  G +++A EF N +  +G +PD ++Y+ + KG     +
Sbjct: 207 RAK-GCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 265

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
                ++  +++ K   P+ VT+ +L+  +C+ G VE  +++ E M   G   N    ++
Sbjct: 266 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +++++CK GR+D+A   L  M + G  PD ++Y+ +++GLC+ ++   A +L  EM  K 
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN       +  LC+K +I +A M  + +    C  ++V YN +++G+   G +  A+
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L+  +  K   P+ +T+ +L+ G C   ++  A  LL  +      P+ VT+   ++ +
Sbjct: 446 ELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++G +   + L+++M      P  +TY  ++ G+      +EA++LL  +   GV+PD 
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDI 562

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TY++II    +   + +A ++ + +    + P +  YN ++  LC   +   A      
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 622

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +  +     ++ Y T+I+    E  + +      ++  +G
Sbjct: 623 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 238/493 (48%), Gaps = 11/493 (2%)

Query: 95  GPSVVSLNAIMSRYCKL----GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
            PS  S N   +R  +L      AE A+ L       G  PD +    LI  LC  G   
Sbjct: 37  APSASSPNPANARLRRLIARDDLAEAAR-LVDRATSRGEAPDVYLCTKLIRNLCRRGRTS 95

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           +A        R G   D   Y+ L  G+    Q+  A ++I  + +    PD  TYT +I
Sbjct: 96  DAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPII 152

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C  G V E L L + ML +G + +V+ Y+VLL ++CKS    +A+ +L EM A G  
Sbjct: 153 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 212

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P++VTY+++I G+C++ +V  A +  N + S    P++ ++  +L GLC  +   +    
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           F  ++  NC+ + V +++++  + + G +  A+Q+  Q+     + +    N +I   CK
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G+V DA + L+ +  +G  P  ++YTT +   C     +    LL+EM  K   P  VT
Sbjct: 333 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 392

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           +   I  LC++  +++A  L+E M   G   + +TYN ++  FC    +  A +L   M 
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM- 451

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
               +P + TY  L+ GLC    L  A  LL  + + + +   V +  ++   C +G + 
Sbjct: 452 --PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 509

Query: 571 KAMTFFCQMVEKG 583
           +A+    QM+E G
Sbjct: 510 EAIELVEQMMEHG 522



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 245/508 (48%), Gaps = 41/508 (8%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVYTN 66
           G V +A+ ++  M     + S+ TY  LL  + + T      ++ D+++      N+ T 
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 218

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +++I+G+C++ R+ DA  FL   +   F P  VS   ++   C     E  + LF  M++
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278

Query: 127 YGLHPDAFSY-----------------------------------NILIHGLCIAGSMEE 151
               P+  ++                                   NI+I+ +C  G +++
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A +F N+MG +G  PD I+Y+ + KG     +   A +++++++ K   P+ VT+   IC
Sbjct: 339 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
             CQ G +E+   L E M   G ++N++ Y+ L++  C  GR+D AL L Y M     KP
Sbjct: 399 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KP 455

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           + +TY+ L+ GLC  +++  A +L  EM  K  +PN      ++   C+K ++ EA    
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 515

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           + ++   C  +++ YN ++DG     N  EA++L   L+   +SP IVT++S+I    + 
Sbjct: 516 EQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSRE 575

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
            +V +A ++   ++  G+ P AV Y   + A C+  N    +     M +    P  +TY
Sbjct: 576 DRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY 635

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
             +I+GL  +  L+E   LL ++   GV
Sbjct: 636 ITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 215/476 (45%), Gaps = 15/476 (3%)

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           ++ A +++ +   +G  PD+   T LI   C+ G   +  ++       G  ++V AY+ 
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++  C+ G++D A  L+  M    + PD  TY+ +IRGLC + +V +A+ L ++M  + 
Sbjct: 119 LVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+   +  +L  +C+     +A    D +    C  ++V YN++I+G  + G + +A 
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +   +L      P  V++ +++ G C   +  D   L   +      P+ VT+   +  +
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C  G ++R + +L++M             +VI  +CKQ ++ +A Q L +M   G +PD 
Sbjct: 296 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           I+Y T+++  C+ +    A +LL +M   N  P   T+N  I  LC  G ++ A  L+  
Sbjct: 356 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 415

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR------------DY 591
           + EH   +  V Y  ++   C +G V  A+  F  M  K   I+              D 
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDA 475

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                  ML     P+     V++  F Q G +    EL   M++ G  P+    N
Sbjct: 476 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYN 531



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 191/377 (50%), Gaps = 6/377 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           ML   + R GMV  A+ V+ +M       +    N ++  +      D  +   +++   
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +  + + V+ GLC+  R +DA   L+E   K   P+ V+ N  +   C+ G  E A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M ++G   +  +YN L++G C+ G ++ ALE    M     +P+ ITY+ L  G
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTG 466

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A +++ ++L K   P++VT+ VL+  +CQ G ++E ++L E M+  G   N
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +I Y+ LL  +      +EAL LL+ + + G+ PD+VTYS +I  L ++D+V +AI++++
Sbjct: 527 LITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 586

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            +    + P +  +  ILL LC++     A  +F  ++ + C+ + + Y  +I+G     
Sbjct: 587 IVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANED 646

Query: 358 NIGEAVQLYRQLIEKRI 374
            + E   L R+L  + +
Sbjct: 647 FLKETRDLLRELCSRGV 663



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 144/313 (46%), Gaps = 3/313 (0%)

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           +R L  +D + +A +L +   S+  +P+ +    ++  LC +   ++A     +   S  
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             DV  YN ++ GY + G +  A +L   +    ++P   T+  +I G C  G+V +A  
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALS 166

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           LLD +   G +PS VTYT  + A C+     + + +L EM  K   P  VTY V+I G+C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           ++ ++ +A + L  +   G  PD ++Y T+++  C  K      +L  +M   N  P   
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           T+++L+   C  G ++ A  +L  +  H  +        +I   C +G V  A  F   M
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 580 VEKGFEISIRDYT 592
              G       YT
Sbjct: 347 GSYGCSPDTISYT 359



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 137/312 (43%), Gaps = 20/312 (6%)

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N  +   +   ++ EA +L  +   +  +P +     LI   C+ G+ +DA R+L   + 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G       Y T +  YC  G +     L+  M    + P   TYT +I+GLC + ++ E
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A+ LL+DM   G  P  +TY  ++ + CK     +A ++L++M      P   TYN++I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF-- 584
           G+C  G + +A   L  L  +      V+YTT++K  CA          F +M+EK    
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 585 -EISIRDYTKSFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
            E++  D    FFC              M  +G   +  +C +++    + G +   F+ 
Sbjct: 284 NEVTF-DMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 342

Query: 631 AAVMIKSGLLPD 642
              M   G  PD
Sbjct: 343 LNNMGSYGCSPD 354


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 161/577 (27%), Positives = 281/577 (48%), Gaps = 33/577 (5%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PSV++ NA++           A+  F  ML  G+ P+ ++YNIL+  LC  G  +EAL  
Sbjct: 154 PSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             DM   G  P+ +TY+ L   F    ++ GA +++  +   G  P++VT+  ++ G C+
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G +E+  K+ + M+ +G   + ++Y+ L+   CK+G   EAL +  EM   G+ PD+VT
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ LI  +CK   + +A+ L  +M  + +  N     A++ G C+K  + +A +    + 
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMK 392

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                  VV YN +I+GY  +G + EA +L  ++  K + P +VT++++I  +CKN    
Sbjct: 393 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 452

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L   +   G+ P A+TY++ +   C E  +     L + M    + P   TYT +I
Sbjct: 453 SAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 512

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G CK+  ++ A+ L + M   GV PD +TY+ +I    K     +A QLL +++  +  
Sbjct: 513 DGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPI 572

Query: 516 PTSATYN---------------ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           P +  Y+                L+ G C+ G +  AD +  S+ + N +L    Y+ +I
Sbjct: 573 PANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLI 632

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP--------------- 605
             HC  G+V KA++F  QM++ GF  +    T S    +  NG                 
Sbjct: 633 HGHCRAGNVMKALSFHKQMLQGGFAPN-STSTISLIRGLFENGMVVEADQVIQQLLNYCS 691

Query: 606 -PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
             D E  + ++      G++ +V ++   M K GLLP
Sbjct: 692 LADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 728



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 162/597 (27%), Positives = 284/597 (47%), Gaps = 57/597 (9%)

Query: 30  SIQTYNSLLYNLRHTDIM--WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           S+  YN++L  L    +      +D +       NVYT +I++  LC +   ++A+  L+
Sbjct: 155 SVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILR 214

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           +  G   GP+VV+ N +++ + + G  + A+ L  +M + GL P+  ++N +++G+C AG
Sbjct: 215 DMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAG 274

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            ME+A +  ++M R G+ PD ++Y+ L  G+        A  V  ++  KG  PD+VT+T
Sbjct: 275 KMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFT 334

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS---------------- 251
            LI   C+ GN+E  + L   M  +G ++N + ++ L+   CK                 
Sbjct: 335 SLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQC 394

Query: 252 -------------------GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
                              GR+DEA  LL+EMEA GLKPD+VTYS +I   CK    H A
Sbjct: 395 RIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSA 454

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            +L  +M  K + P++  + +++  LC ++ +++A + F ++I      D   Y  +IDG
Sbjct: 455 FELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 514

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           + K GN+  A+ L+ ++++  + P +VT++ LI G  K+ +  +A++LL  +      P+
Sbjct: 515 HCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPA 574

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
              Y   M+  C +  ++ +LALL                   KG C +  + EA ++ +
Sbjct: 575 NTKYDALMHC-CRKAELKSVLALL-------------------KGFCMKGLMNEADKVYQ 614

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            M       D   Y+ +I   C+  ++ KA     QM      P S +   LI GL  NG
Sbjct: 615 SMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENG 674

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            +  AD ++  L  +       A   +I  +  EG+V   +     M + G   S R
Sbjct: 675 MVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPSPR 731



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 228/488 (46%), Gaps = 47/488 (9%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
           L   + R G V  A  ++  M+E  LK ++ T+NS+                        
Sbjct: 231 LVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSM------------------------ 266

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
                   ++G+C+  +++DA     E   +   P  VS N ++  YCK G +  A  +F
Sbjct: 267 --------VNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVF 318

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+ PD  ++  LIH +C AG++E A+     M   G++ + +T++ L  GF   
Sbjct: 319 AEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKK 378

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A   ++ +      P +V Y  LI GYC +G ++E  +L   M ++G K +V+ Y
Sbjct: 379 GFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTY 438

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S ++S+ CK+     A  L  +M   G+ PD +TYS LIR LC + ++  A  L+  M  
Sbjct: 439 STIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIK 498

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             + P+ F + +++ G C++  +  A    D ++ +  + DVV Y+++I+G  K     E
Sbjct: 499 LGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAME 558

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIY---------------GFCKNGKVADARRLLDTIKL 406
           A QL  +L  +   P+   +++L++               GFC  G + +A ++  ++  
Sbjct: 559 AQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLD 618

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
                    Y+  ++ +C  GN+ + L+  ++M      P   +   +I+GL +   + E
Sbjct: 619 RNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVE 678

Query: 467 AVQLLEDM 474
           A Q+++ +
Sbjct: 679 ADQVIQQL 686



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 188/390 (48%), Gaps = 16/390 (4%)

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  P ++ Y+ ++  L     +  A + ++ M S  ++PN + +  ++  LC +    EA
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                 +  + C  +VV YN ++  + + G +  A +L   + E  + P++VTFNS++ G
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK GK+ DAR++ D +   GL P  V+Y T +  YC+ G     L++  EM  K I P 
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            VT+T +I  +CK   L+ AV L+  M   G+  +++T+  +I  FCK   L  A   + 
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M    ++P+   YN LI+G C+ G +  A  LL  ++   +    V Y+TII A+C   
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICE 612
           D H A     QM+EKG       Y+                  F  M+  G  PD+    
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            ++    + G++ S   L   M+K+G+LPD
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPD 539



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 188/425 (44%), Gaps = 53/425 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           Y + G  H+A+ V A+M +  +   + T+ SL++      + +    L   ++      N
Sbjct: 305 YCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMN 364

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +IDG C++  L DA+L ++        PSVV  NA+++ YC +G  + A+ L  
Sbjct: 365 EVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLH 424

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   GL PD  +Y+ +I   C       A E    M   GV PDAITYS L +      
Sbjct: 425 EMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEK 484

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++S A  + + ++  G  PD  TYT LI G+C+ GNVE  L L + M+  G   +V+ YS
Sbjct: 485 RLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYS 544

Query: 243 VLLSSMCKSGRIDEALGLLY------------------------EMEAV----------G 268
           VL++ + KS R  EA  LL+                        E+++V          G
Sbjct: 545 VLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKG 604

Query: 269 L----------------KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           L                  D   YS+LI G C+   V KA+  + +M     +PNS +  
Sbjct: 605 LMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTI 664

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           +++ GL E  M+ EA      L+    + D      +ID  +  GN+   + +   + + 
Sbjct: 665 SLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKD 724

Query: 373 RISPS 377
            + PS
Sbjct: 725 GLLPS 729


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 161/528 (30%), Positives = 275/528 (52%), Gaps = 18/528 (3%)

Query: 10   GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDD----IKVSETPR---- 61
            G++ +A  V  KM    L +S+ + N  L  L       D Y      I   E P     
Sbjct: 632  GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK-----DCYKTATAIIVFREFPEVGVC 686

Query: 62   -NVYTNSIVIDGLCQQSRLQDA--ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
             NV + +IVI  +CQ  R+++A  +L L E  G  + P V+S + +++ YC+ G  +   
Sbjct: 687  WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG--YTPDVISYSTVVNGYCRFGELDKVW 744

Query: 119  GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             L  +M + GL P+++ Y  +I  LC    + EA E  ++M R G+ PD + Y+ L  GF
Sbjct: 745  KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 804

Query: 179  HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                 I  A K   ++  +   PD++TYT +I G+CQIG++ E  KL   M  +G + + 
Sbjct: 805  CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 864

Query: 239  IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
            + ++ L++  CK+G + +A  +   M   G  P++VTY+ LI GLCK+  +  A +L +E
Sbjct: 865  VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 924

Query: 299  MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
            M    + PN F + +I+ GLC+   I EA         +    D V Y  ++D Y K G 
Sbjct: 925  MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 984

Query: 359  IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
            + +A ++ ++++ K + P+IVTFN L+ GFC +G + D  +LL+ +   G+ P+A T+ +
Sbjct: 985  MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 1044

Query: 419  FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
             +  YC   N++   A+ ++M ++ +GP   TY  ++KG CK   ++EA  L ++M   G
Sbjct: 1045 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 1104

Query: 479  VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
             +    TY+ +I+ F K K   +A ++ +QM    L      ++   D
Sbjct: 1105 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 1152



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/512 (29%), Positives = 256/512 (50%), Gaps = 3/512 (0%)

Query: 97   SVVSLNAIMSRYCKLGF-AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
            SV S N  ++R  K  +    A  +F    + G+  +  SYNI+IH +C  G ++EA   
Sbjct: 652  SVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHL 711

Query: 156  TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
               M   G  PD I+YS +  G+    ++   WK+I+ +  KG  P+   Y  +I   C+
Sbjct: 712  LLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 771

Query: 216  IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            I  + E  +    M+ QG   + + Y+ L+   CK G I  A    YEM +  + PD++T
Sbjct: 772  ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 831

Query: 276  YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
            Y+ +I G C+   + +A +L++EM  K + P+S     ++ G C+   + +A    + +I
Sbjct: 832  YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 891

Query: 336  MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
             + C  +VV Y  +IDG  K G++  A +L  ++ +  + P+I T+NS++ G CK+G + 
Sbjct: 892  QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 951

Query: 396  DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            +A +L+   +  GL    VTYTT M+AYC+ G + +   +L+EM  K + PT VT+ V++
Sbjct: 952  EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 1011

Query: 456  KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             G C    L++  +LL  M   G+ P+  T+N++++ +C   +L+ A  +   M    + 
Sbjct: 1012 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 1071

Query: 516  PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
            P   TY  L+ G C   ++K A  L   ++    S++   Y+ +IK         +A   
Sbjct: 1072 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 1131

Query: 576  FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
            F QM  +G       +   FF      G  PD
Sbjct: 1132 FDQMRREGLAADKEIF--DFFSDTKYKGKRPD 1161



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 264/548 (48%), Gaps = 20/548 (3%)

Query: 92   KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGL---CIAGS 148
            K++G      +         G    A+ +F  ML YGL     S N+ +  L   C   +
Sbjct: 612  KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 671

Query: 149  MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
               A+    +    GV  +  +Y+I+      L +I  A  ++  + +KG  PD+++Y+ 
Sbjct: 672  T--AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 729

Query: 209  LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
            ++ GYC+ G +++  KL EVM  +G K N   Y  ++  +C+  ++ EA     EM   G
Sbjct: 730  VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 789

Query: 269  LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
            + PD V Y+ LI G CK+  +  A + + EM S+ I+P+   + AI+ G C+   + EA 
Sbjct: 790  ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 849

Query: 329  MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
              F  +       D V +  +I+GY K G++ +A +++  +I+   SP++VT+ +LI G 
Sbjct: 850  KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 909

Query: 389  CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            CK G +  A  LL  +   GL+P+  TY + +N  C+ GNI+  + L+ E E   +    
Sbjct: 910  CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 969

Query: 449  VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
            VTYT ++   CK  ++ +A ++L++M   G+ P  +T+N ++  FC    L    +LLN 
Sbjct: 970  VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1029

Query: 509  MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
            M    + P + T+N L+   C+  +LK A  +   +    +      Y  ++K HC   +
Sbjct: 1030 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 1089

Query: 569  VHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEV 613
            + +A   F +M  KGF +S+  Y+               +  F  M   G   D+EI + 
Sbjct: 1090 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 1149

Query: 614  MLIAFHQG 621
                 ++G
Sbjct: 1150 FSDTKYKG 1157



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 175/369 (47%), Gaps = 3/369 (0%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
            + + G +  A     +M   D+   + TY +++        M +   L+ ++       +
Sbjct: 804  FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 863

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
              T + +I+G C+   ++DA             P+VV+   ++   CK G  + A  L  
Sbjct: 864  SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 923

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             M K GL P+ F+YN +++GLC +G++EEA++   +    G+  D +TY+ L   +    
Sbjct: 924  EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 983

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            ++  A ++++++L KG  P IVT+ VL+ G+C  G +E+G KL   ML++G   N   ++
Sbjct: 984  EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 1043

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             L+   C    +  A  +  +M + G+ PD  TY  L++G CK   + +A  L+ EM  K
Sbjct: 1044 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 1103

Query: 303  RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              S +   +  ++ G  +++   EAR  FD +       D  +++   D   K       
Sbjct: 1104 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTI 1163

Query: 363  VQLYRQLIE 371
            V    ++IE
Sbjct: 1164 VDPIDEIIE 1172



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 25/254 (9%)

Query: 392 GKVADARRLLDTIKLHGLEPSAVT---YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           G + +ARR+ + +  +GL  S  +   Y T ++  C +      + + +E     +    
Sbjct: 632 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYK--TATAIIVFREFPEVGVCWNV 689

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
            +Y +VI  +C+  +++EA  LL  M + G TPD I+Y+T++  +C+  +L K ++L+  
Sbjct: 690 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 749

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    L+P S  Y  +I  LC    L  A+     +    I    V YTT+I   C  GD
Sbjct: 750 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 809

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
           +  A  FF       +E+  RD T             PD      ++  F Q GD+    
Sbjct: 810 IRAASKFF-------YEMHSRDIT-------------PDVLTYTAIISGFCQIGDMVEAG 849

Query: 629 ELAAVMIKSGLLPD 642
           +L   M   GL PD
Sbjct: 850 KLFHEMFCKGLEPD 863


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 151/500 (30%), Positives = 263/500 (52%), Gaps = 2/500 (0%)

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           QE +    G +V +LN +++  CK G  E        + + G++PD  +YN LI      
Sbjct: 214 QEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQ 273

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G MEEA E  + M   G  P   TY+ +  G     +   A +V  ++L  G  PD  TY
Sbjct: 274 GLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 333

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             L+   C+ G+  E   +   M S+    +++ +S ++S   +SG +D+AL     ++ 
Sbjct: 334 RSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 393

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            GL PD V Y+ILI+G C++  + +A+ L NEM  +  + +   +  IL GLC+++M+ E
Sbjct: 394 AGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 453

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A   F+ +       D     I+IDG+ KLGN+  A++L++++ EKRI   +VT+N+L+ 
Sbjct: 454 ADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLD 513

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           GF K G +  A+ +   +    + P+ ++++  +NA C +G++     +  EM +K+I P
Sbjct: 514 GFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKP 573

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
           T +    +IKG C+     +    LE M   G  PD I+YNT+I  F K +++ KAF L+
Sbjct: 574 TVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLV 633

Query: 507 NQMWLHN--LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
            +M      L P   TYN ++ G C    +K A+ +L  + E  ++  +  YT++I    
Sbjct: 634 KKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFV 693

Query: 565 AEGDVHKAMTFFCQMVEKGF 584
           ++ ++ +A  F  +M+++GF
Sbjct: 694 SQDNLTEAFRFHDEMLQRGF 713



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 158/554 (28%), Positives = 266/554 (48%), Gaps = 42/554 (7%)

Query: 3   AFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSET 59
            FV +R   + +A      ++     VSI   N+L+ +L      ++ W +Y +I  S  
Sbjct: 164 TFVQARK--LREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGV 221

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             NVYT +I+++ LC+  +++    FL E   K   P +V+ N ++S Y   G  E A  
Sbjct: 222 GVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFE 281

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL----- 174
           L   M   G  P  ++YN +I+GLC  G  E A E   +M R G+ PD+ TY  L     
Sbjct: 282 LMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 341

Query: 175 AKG------------------------------FHLLSQISGAWKVIQKLLIKGSDPDIV 204
            KG                              F     +  A      +   G  PD V
Sbjct: 342 KKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 401

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            YT+LI GYC+ G + E + LR  ML QG  ++V+ Y+ +L  +CK   + EA  L  EM
Sbjct: 402 IYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 461

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              GL PD  T +ILI G CK   +  A++L+ +M  KRI  +   +  +L G  +   I
Sbjct: 462 TERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDI 521

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
             A+  +  ++    +   + ++I+++     G++ EA +++ ++I K I P+++  NS+
Sbjct: 522 DTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSM 581

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G+C++G  +D    L+ +   G  P  ++Y T +  + +E N+ +   L+++ME K  
Sbjct: 582 IKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQG 641

Query: 445 G--PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
           G  P   TY  ++ G C++ +++EA  +L  M   GV PD+ TY ++I  F    +L +A
Sbjct: 642 GLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEA 701

Query: 503 FQLLNQMWLHNLEP 516
           F+  ++M      P
Sbjct: 702 FRFHDEMLQRGFSP 715



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 157/655 (23%), Positives = 294/655 (44%), Gaps = 73/655 (11%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           R+G + DA   + +M        ++  NSL+    N    D ++DL              
Sbjct: 115 RSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDL-------------- 160

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
               +I    Q  +L++A         K +  S+ + NA++    ++G+ E+A  ++  +
Sbjct: 161 ----LIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI 216

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G+  + ++ NI+++ LC  G ME+   F +++   GV P                  
Sbjct: 217 SRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYP------------------ 258

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
                            DIVTY  LI  Y   G +EE  +L   M S+GF   V  Y+ +
Sbjct: 259 -----------------DIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTV 301

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++ +CK G+ + A  +  EM   GL PD  TY  L+   CK+    +   ++++M S+ +
Sbjct: 302 INGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDV 361

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+     +++        + +A MYF+S+  +  I D V+Y I+I GY + G I EA+ 
Sbjct: 362 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMN 421

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L  +++++  +  +VT+N++++G CK   + +A +L + +   GL P + T T  ++ +C
Sbjct: 422 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHC 481

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + GN+Q  + L ++M+ K I    VTY  ++ G  K   +  A ++  DM    + P  I
Sbjct: 482 KLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 541

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           +++ ++ + C    L +AF++ ++M   +++PT    N +I G C +G+  + +  L  +
Sbjct: 542 SFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKM 601

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK--GFEISIRDYTKSF--FCM-- 598
                    ++Y T+I     E ++ KA     +M EK  G    +  Y      FC   
Sbjct: 602 ISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCREN 661

Query: 599 -----------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                      M+  G  PD+     ++  F    +L   F     M++ G  PD
Sbjct: 662 QMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 123/511 (24%), Positives = 205/511 (40%), Gaps = 102/511 (19%)

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEM------EAVGLKPDLV-TYS--------- 277
           FK   ++ S ++  + +SGR+ +A   +  M        V +   LV TYS         
Sbjct: 99  FKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVF 158

Query: 278 -ILIRGLCKQDKVHKAIQ-----------------------------------LYNEMCS 301
            +LIR   +  K+ +A +                                   +Y E+  
Sbjct: 159 DLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISR 218

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +  N +    ++  LC+   + +   +   +       D+V YN +I  Y   G + E
Sbjct: 219 SGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEE 278

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY----- 416
           A +L   +  K  SP + T+N++I G CK+GK   A+ +   +   GL P + TY     
Sbjct: 279 AFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 338

Query: 417 ------------------------------TTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
                                         ++ M+ +   GN+ + L     ++   + P
Sbjct: 339 EACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 398

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
            +V YT++I+G C++  + EA+ L  +M   G   D +TYNTI+   CK K L +A +L 
Sbjct: 399 DNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 458

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           N+M    L P S T  ILIDG C  G+L+NA  L   ++E  I L  V Y T++      
Sbjct: 459 NEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKV 518

Query: 567 GDVHKAMTFFCQMVEK-------GFEISIR------DYTKSF--FCMMLSNGFPPDQEIC 611
           GD+  A   +  MV K        F I +         +++F  +  M+S    P   IC
Sbjct: 519 GDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMIC 578

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             M+  + + G+          MI  G +PD
Sbjct: 579 NSMIKGYCRSGNASDGEIFLEKMISEGFVPD 609



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 20/265 (7%)

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           F+ LI  F +  K+ +A      ++  G   S       + +    G ++    + QE+ 
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
              +G    T  +++  LCK  K+++    L ++   GV PD +TYNT+I ++     + 
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLME 277

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +AF+L++ M      P   TYN +I+GLC +G  + A  +   +    +S     Y +++
Sbjct: 278 EAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 337

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
              C +GD           VE          T++ F  M S    PD      M+  F +
Sbjct: 338 MEACKKGDA----------VE----------TENIFSDMRSRDVVPDLVCFSSMMSLFTR 377

Query: 621 GGDLGSVFELAAVMIKSGLLPDKFL 645
            G+L         + ++GL+PD  +
Sbjct: 378 SGNLDKALMYFNSVKEAGLIPDNVI 402


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/566 (28%), Positives = 280/566 (49%), Gaps = 22/566 (3%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E P +VY  + +I  LC++ R  DA   L+          V + N +++ YC+ G  + A
Sbjct: 105 EAP-DVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 163

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   M    + PDA++Y  +I GLC  G + EAL   +DM   G +P  +TY++L + 
Sbjct: 164 RRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 220

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
               +    A +V+ ++  KG  P+IVTY V+I G C+ G V++  +    + S GF+ +
Sbjct: 221 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 280

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            ++Y+ +L  +C + R ++   L  EM      P+ VT+ +L+R  C+   V +AIQ+  
Sbjct: 281 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLE 340

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M     + N+     ++  +C++  + +A  + +++    C  D + Y  ++ G  +  
Sbjct: 341 QMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAE 400

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
              +A +L ++++ K   P+ VTFN+ I   C+ G +  A  L++ +  HG E + VTY 
Sbjct: 401 RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYN 460

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N +C +G +   L L   M  K   P  +TYT ++ GLC   +L  A +LL +M   
Sbjct: 461 ALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQK 517

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
              P+ +T+N ++  FC+   + +A +L+ QM  H   P   TYN L+DG+  + + + A
Sbjct: 518 DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEA 577

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---- 593
             LL  L  + +S   V Y++II     E  V +A+  F  + + G       Y K    
Sbjct: 578 LELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLA 637

Query: 594 -----------SFFCMMLSNGFPPDQ 608
                       FF  M+SNG  P++
Sbjct: 638 LCKRCNTDGAIDFFAYMVSNGCMPNE 663



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/580 (24%), Positives = 288/580 (49%), Gaps = 11/580 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           R G   DA  V+   +     V +  YN+L+         D    L   + V+    + Y
Sbjct: 121 RRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAP---DAY 177

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK-LGFAEVAKGLFCL 123
           T + +I GLC + R+ +A+  L +   +   PSVV+   ++   CK  GF +  + L  +
Sbjct: 178 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 237

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
             K G  P+  +YN++I+G+C  G +++A EF N +  +G +PD ++Y+ + KG     +
Sbjct: 238 RAK-GCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 296

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
                ++  +++ K   P+ VT+ +L+  +C+ G VE  +++ E M   G   N    ++
Sbjct: 297 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 356

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +++++CK GR+D+A   L  M + G  PD ++Y+ +++GLC+ ++   A +L  EM  K 
Sbjct: 357 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 416

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN       +  LC+K +I +A M  + +    C  ++V YN +++G+   G +  A+
Sbjct: 417 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 476

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L+  +  K   P+ +T+ +L+ G C   ++  A  LL  +      P+ VT+   ++ +
Sbjct: 477 ELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 533

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++G +   + L+++M      P  +TY  ++ G+ K    +EA++LL  +   GV+PD 
Sbjct: 534 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 593

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TY++II    +   + +A ++ + +    + P +  YN ++  LC   +   A      
Sbjct: 594 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 653

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +  +     ++ Y T+I+    E  + +      ++  +G
Sbjct: 654 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 693



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 246/508 (48%), Gaps = 41/508 (8%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVYTN 66
           G V +A+ ++  M     + S+ TY  LL  + + T      ++ D+++      N+ T 
Sbjct: 190 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 249

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +++I+G+C++ R+ DA  FL   +   F P  VS   ++   C     E  + LF  M++
Sbjct: 250 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 309

Query: 127 YGLHPDAFSY-----------------------------------NILIHGLCIAGSMEE 151
               P+  ++                                   NI+I+ +C  G +++
Sbjct: 310 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 369

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A +F N+MG +G  PD I+Y+ + KG     +   A +++++++ K   P+ VT+   IC
Sbjct: 370 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 429

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
             CQ G +E+   L E M   G ++N++ Y+ L++  C  GR+D AL L Y M     KP
Sbjct: 430 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KP 486

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           + +TY+ L+ GLC  +++  A +L  EM  K  +PN      ++   C+K ++ EA    
Sbjct: 487 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 546

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           + ++   C  +++ YN ++DG  K  N  EA++L   L+   +SP IVT++S+I    + 
Sbjct: 547 EQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSRE 606

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
            +V +A ++   ++  G+ P AV Y   + A C+  N    +     M +    P  +TY
Sbjct: 607 DRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY 666

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
             +I+GL  +  L+E   LL ++   GV
Sbjct: 667 ITLIEGLANEDFLKETRDLLRELCSRGV 694



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 225/456 (49%), Gaps = 6/456 (1%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  PD +    LI  LC  G   +A        R G   D   Y+ L  G+    Q+  A
Sbjct: 104 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 163

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++I  + +    PD  TYT +I G C  G V E L L + ML +G + +V+ Y+VLL +
Sbjct: 164 RRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 220

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CKS    +A+ +L EM A G  P++VTY+++I G+C++ +V  A +  N + S    P+
Sbjct: 221 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 280

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           + ++  +L GLC  +   +    F  ++  NC+ + V +++++  + + G +  A+Q+  
Sbjct: 281 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLE 340

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           Q+     + +    N +I   CK G+V DA + L+ +  +G  P  ++YTT +   C   
Sbjct: 341 QMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAE 400

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
             +    LL+EM  K   P  VT+   I  LC++  +++A  L+E M   G   + +TYN
Sbjct: 401 RWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYN 460

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++  FC    +  A +L   M     +P + TY  L+ GLC    L  A  LL  + + 
Sbjct: 461 ALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK 517

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           + +   V +  ++   C +G + +A+    QM+E G
Sbjct: 518 DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 553



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 213/473 (45%), Gaps = 15/473 (3%)

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +++ +   +G  PD+   T LI   C+ G   +  ++       G  ++V AY+ L++
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             C+ G++D A  L+  M    + PD  TY+ +IRGLC + +V +A+ L ++M  +   P
Sbjct: 153 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +  +L  +C+     +A    D +    C  ++V YN++I+G  + G + +A +  
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            +L      P  V++ +++ G C   +  D   L   +      P+ VT+   +  +C  
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 329

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G ++R + +L++M             +VI  +CKQ ++ +A Q L +M   G +PD I+Y
Sbjct: 330 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY 389

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
            T+++  C+ +    A +LL +M   N  P   T+N  I  LC  G ++ A  L+  + E
Sbjct: 390 TTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 449

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR------------DYTKS 594
           H   +  V Y  ++   C +G V  A+  F  M  K   I+              D    
Sbjct: 450 HGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAE 509

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               ML     P+     V++  F Q G +    EL   M++ G  P+    N
Sbjct: 510 LLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYN 562



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 192/377 (50%), Gaps = 6/377 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           ML   + R GMV  A+ V+ +M       +    N ++  +      D  +   +++   
Sbjct: 321 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 380

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +  + + V+ GLC+  R +DA   L+E   K   P+ V+ N  +   C+ G  E A
Sbjct: 381 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 440

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M ++G   +  +YN L++G C+ G ++ ALE    M     +P+ ITY+ L  G
Sbjct: 441 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTG 497

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A +++ ++L K   P++VT+ VL+  +CQ G ++E ++L E M+  G   N
Sbjct: 498 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 557

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +I Y+ LL  + K    +EAL LL+ + + G+ PD+VTYS +I  L ++D+V +AI++++
Sbjct: 558 LITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 617

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            +    + P +  +  ILL LC++     A  +F  ++ + C+ + + Y  +I+G     
Sbjct: 618 IVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANED 677

Query: 358 NIGEAVQLYRQLIEKRI 374
            + E   L R+L  + +
Sbjct: 678 FLKETRDLLRELCSRGV 694



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 138/302 (45%), Gaps = 3/302 (0%)

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A +L +   S+  +P+ +    ++  LC +   ++A     +   S    DV  YN ++
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            GY + G +  A +L   +    ++P   T+  +I G C  G+V +A  LLD +   G +
Sbjct: 152 AGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           PS VTYT  + A C+     + + +L EM  K   P  VTY V+I G+C++ ++ +A + 
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L  +   G  PD ++Y T+++  C  K      +L  +M   N  P   T+++L+   C 
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            G ++ A  +L  +  H  +        +I   C +G V  A  F   M   G       
Sbjct: 329 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 388

Query: 591 YT 592
           YT
Sbjct: 389 YT 390



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 18/228 (7%)

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           R   L+    ++   P     T +I+ LC++ +  +A ++L      G   D   YNT++
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             +C+   L  A +L+  M    + P + TY  +I GLC  G +  A  LL  +      
Sbjct: 152 AGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSF 595
            + V YT +++A C      +AM    +M  KG   +I  Y                + F
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
              + S GF PD      +L           V EL A M++   +P++
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNE 316


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 157/509 (30%), Positives = 265/509 (52%), Gaps = 9/509 (1%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M +  + PD  SYN +I+GLC    +E+A++   +M     EP++ TY IL  G     +
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A +++ ++  KG + D+V Y+ LI G+C  G ++ G  L + ML +G   NV+ YS 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++  CK G   EA  +L+ M   G++PD+ TY+ +I GLCK  +  KA+ L++ M  K 
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P++  +  ++ GLC++  I +A   F++++      +VV YN +I G    G + EA+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 364 QLYRQLIE--KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           +L+  L+E    + P ++TFN++I G CK G++  A  + DT+   G   +  T    + 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            Y + G I + + L + +    + P+  TY+V+I G CK   L  A  L   M + G++P
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
               YNT++ S CK   L +A +L  +M   N EP + ++NI+IDG    GD+ +A  LL
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
             +Q+  ++     Y++ I      G + +A   F  M+  G       Y        L 
Sbjct: 421 NDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDS------LI 474

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
            GF  + EI EV+ +   Q  D+G + +L
Sbjct: 475 KGFGLNDEIEEVINL-LRQMADMGVILDL 502



 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 155/548 (28%), Positives = 280/548 (51%), Gaps = 40/548 (7%)

Query: 22  MKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSR 78
           MK +++   I +YN+++  L   +  +   DL  +++ S    N +T  I++DGLC++ R
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           +++A+  L E   K     VV  + ++S +C  G  +  K LF  ML+ G+ P+   Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI+G C  G   EA    + M   G++PD  TY+ +  G     +   A  +   +  KG
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
            +P  VTY VLI G C+ G + +  K+ E ML +G +L V++Y+ L+  +C +G++DEA+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 259 GLLYEMEAVG--LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
            L   +   G  ++PD++T++ +I+GLCK+ ++ KA+++Y+ M    I   SF +    L
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTM----IERGSFGN----L 292

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
             C                           +I+I  Y+K G I +A++L++++ +  + P
Sbjct: 293 FTC---------------------------HILIGEYIKSGIIDKAMELWKRVHKLGLVP 325

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           S  T++ +I GFCK   +  A+ L   +K+ GL P+   Y T M + C+E ++++   L 
Sbjct: 326 SSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLF 385

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           QEM+     P  +++ ++I G  K   +  A +LL DM  +G+TPD  TY++ I    K 
Sbjct: 386 QEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKL 445

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
             + +A    + M    + P +  Y+ LI G  +N +++    LL  + +  + L     
Sbjct: 446 GQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEIT 505

Query: 557 TTIIKAHC 564
            +I+   C
Sbjct: 506 NSILTFLC 513



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/506 (29%), Positives = 252/506 (49%), Gaps = 4/506 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P +VS N I++  CK    E A  L   M      P++F+Y IL+ GLC  G +EEA+  
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M R G+E D + YS L  GF     +     +  ++L KG  P++V Y+ LI G+C+
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G   E   +   M  +G + +V  Y+ ++  +CK GR  +AL L   M   G +P  VT
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y++LI GLCK+  +  A +++  M  K       ++  +++GLC    + EA   F SL+
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247

Query: 336 M-SNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
              N ++ DV+ +N +I G  K G + +AV++Y  +IE+    ++ T + LI  + K+G 
Sbjct: 248 EDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGI 307

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           +  A  L   +   GL PS+ TY+  ++ +C+   +     L   M+   + PT   Y  
Sbjct: 308 IDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNT 367

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           ++  LCK+  L++A +L ++M      PD I++N +I    K  D+  A +LLN M    
Sbjct: 368 LMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMG 427

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           L P + TY+  I+ L   G ++ A     S+    I+     Y ++IK      ++ + +
Sbjct: 428 LTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVI 487

Query: 574 TFFCQMVEKG--FEISIRDYTKSFFC 597
               QM + G   ++ I +   +F C
Sbjct: 488 NLLRQMADMGVILDLEITNSILTFLC 513



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 216/446 (48%), Gaps = 22/446 (4%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           PDIV+Y  +I G C+   +E+ + L   M     + N   Y +L+  +CK GR++EA+ L
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L EM+  GL+ D+V YS LI G C +  + +   L++EM  K ISPN   +  ++ G C+
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
           K +  EA     ++       DV  Y  MI G  K G   +A+ L+  + EK   PS VT
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM- 439
           +N LI G CK G + DA ++ +T+   G     V+Y T +   C  G +   + L   + 
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247

Query: 440 -ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
            +   + P  +T+  VI+GLCK+ +L +AV++ + M   G   +  T + +I  + K   
Sbjct: 248 EDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGI 307

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           + KA +L  ++    L P+S TY+++IDG C    L  A  L   ++   +S T   Y T
Sbjct: 308 IDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNT 367

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAF 618
           ++ + C E  + +A   F +M E   E                    PD     +M+   
Sbjct: 368 LMASLCKESSLEQARRLFQEMKESNCE--------------------PDTISFNIMIDGT 407

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDKF 644
            + GD+ S  EL   M + GL PD +
Sbjct: 408 LKAGDIHSAKELLNDMQQMGLTPDAY 433



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 193/392 (49%), Gaps = 21/392 (5%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + + G+  +A  V+  M E  ++  + TY  ++  L          DL+D +       +
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPS 184

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T +++I+GLC++  + DA    +    K     VVS N ++   C  G  + A  LF 
Sbjct: 185 TVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFS 244

Query: 123 LMLKYG--LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF-- 178
            +L+ G  + PD  ++N +I GLC  G +++A+E  + M   G   +  T  IL   +  
Sbjct: 245 SLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIK 304

Query: 179 -HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG--NVEEGLKLREVMLSQGFK 235
             ++ +    WK + KL   G  P   TY+V+I G+C++   N  +GL  R  M   G  
Sbjct: 305 SGIIDKAMELWKRVHKL---GLVPSSTTYSVMIDGFCKMHMLNFAKGLFSR--MKISGLS 359

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
             +  Y+ L++S+CK   +++A  L  EM+    +PD ++++I+I G  K   +H A +L
Sbjct: 360 PTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKEL 419

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
            N+M    ++P+++ + + +  L +   + EA+  FDS+I S    D  +Y+ +I G+  
Sbjct: 420 LNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGL 479

Query: 356 LGNIGEAVQLYRQL------IEKRISPSIVTF 381
              I E + L RQ+      ++  I+ SI+TF
Sbjct: 480 NDEIEEVINLLRQMADMGVILDLEITNSILTF 511


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 145/461 (31%), Positives = 250/461 (54%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           L+L     P  F +N ++  L  A     AL     M  +G+E D  T++IL   F  L 
Sbjct: 51  LLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLG 110

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
             S ++ +  K+L KG  P  +T+  LI G C  G++ + L   + +++QGF L+ ++Y 
Sbjct: 111 LNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYG 170

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++ +CK GRI  AL LL  ++   ++P+ V Y+++I  +CK   V+ A  LY++M +K
Sbjct: 171 TLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK 230

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
           RI P+ F + A++ G      +  A   F+ +   N   +V  +NI++DG+ K G + +A
Sbjct: 231 RICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDA 290

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +   +++  I P +VT+NSL+ G+C   KV  A+ + D++   G+  +   YTT +N 
Sbjct: 291 KVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNG 350

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +C+   +   + L +EM  + I P  VTY+ +I GLCK  ++  A++L+++M+  G  P+
Sbjct: 351 FCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPN 410

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TY++I+ + CK   + KA  LL  +    + P   TY ILI GLC +G L++A  +  
Sbjct: 411 IVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFE 470

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            L     +L   AYT +I+  C +G   KA+    +M + G
Sbjct: 471 DLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNG 511



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 257/485 (52%), Gaps = 1/485 (0%)

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           + TP     N I +  L +      A+   Q+           + N +++ + +LG   +
Sbjct: 56  NPTPPTFQFNKI-LSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSL 114

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           +  +F  +LK G HP A ++N LI GLC+ G + +AL F + +   G   D ++Y  L  
Sbjct: 115 SFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLIN 174

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G   + +I+ A ++++++  K   P+ V Y ++I   C+   V +   L   M+++    
Sbjct: 175 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICP 234

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +V  Y+ L+S      +++ A+ L  +M+   + P++ T++IL+ G CK+ KV+ A  + 
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             M    I P+   + +++ G C    + +A+  FDS+     I +V +Y  M++G+ K+
Sbjct: 295 AIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKI 354

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             + EA+ L+ ++  ++I P++VT++SLI G CK G++  A +L+D +   G  P+ VTY
Sbjct: 355 KMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTY 414

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           ++ ++A C+  ++ + +ALL  ++ + I P   TYT++IKGLC+  +L++A  + ED+ V
Sbjct: 415 SSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLV 474

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G   D   Y  +I+ FC      KA  LL++M  +   P + TY ++I  L    +   
Sbjct: 475 KGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDT 534

Query: 537 ADCLL 541
           A+ LL
Sbjct: 535 AEKLL 539



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 239/484 (49%), Gaps = 3/484 (0%)

Query: 34  YNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA 90
           +N +L +L   +H      L+  ++++    + +T +I+I+   Q      +     +  
Sbjct: 64  FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKIL 123

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
            K + P+ ++ N ++   C  G    A      ++  G H D  SY  LI+GLC  G + 
Sbjct: 124 KKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 183

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            AL+    +    V+P+A+ Y+++         ++ A+ +  +++ K   PD+ TY  LI
Sbjct: 184 AALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALI 243

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G+  +  +   + L   M  +    NV  +++L+   CK G++++A  +L  M    +K
Sbjct: 244 SGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIK 303

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD+VTY+ L+ G C  +KV+KA  +++ M S  +  N   +  ++ G C+ +M+ EA   
Sbjct: 304 PDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINL 363

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           F+ +     I +VV Y+ +IDG  KLG I  A++L  ++ ++   P+IVT++S++   CK
Sbjct: 364 FEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCK 423

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           N  V  A  LL  +K  G+ P   TYT  +   C+ G ++    + +++  K        
Sbjct: 424 NHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYA 483

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           YTV+I+G C +    +A+ LL  M   G  P+  TY  +I S  +  +   A +LL +M 
Sbjct: 484 YTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMI 543

Query: 511 LHNL 514
           +  L
Sbjct: 544 VRGL 547



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 156/317 (49%), Gaps = 32/317 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           +S    ++ A+ +  KMK+ ++  ++ T+N                              
Sbjct: 246 FSAVSKLNYAIDLFNKMKKENINPNVYTFN------------------------------ 275

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
             I++DG C++ ++ DA + L      +  P VV+ N++M  YC +     AK +F  M 
Sbjct: 276 --ILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMA 333

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G+  +   Y  +++G C    ++EA+    +M    + P+ +TYS L  G   L +I 
Sbjct: 334 SGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIF 393

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A K++ ++  +G  P+IVTY+ ++   C+  +V++ + L   +  QG + ++  Y++L+
Sbjct: 394 YALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILI 453

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +C+SGR+++A  +  ++   G   D+  Y+++I+G C +    KA+ L ++M      
Sbjct: 454 KGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCI 513

Query: 306 PNSFAHGAILLGLCEKE 322
           PN+  +  ++L L EK+
Sbjct: 514 PNAKTYELVILSLFEKD 530



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 135/267 (50%), Gaps = 3/267 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           + + G V+DA  V+A M + D+K  + TYNSL+    ++   +   D++D +       N
Sbjct: 281 FCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIAN 340

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V   + +++G C+   + +AI   +E   ++  P+VV+ ++++   CKLG    A  L  
Sbjct: 341 VQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVD 400

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G  P+  +Y+ ++  LC    +++A+    ++   G+ PD  TY+IL KG     
Sbjct: 401 EMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSG 460

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A  V + LL+KG + D+  YTV+I G+C  G  ++ L L   M   G   N   Y 
Sbjct: 461 RLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYE 520

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGL 269
           +++ S+ +    D A  LL EM   GL
Sbjct: 521 LVILSLFEKDENDTAEKLLREMIVRGL 547



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 117/274 (42%), Gaps = 20/274 (7%)

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           L+ K  +P    FN ++    K    + A  L   ++L+G+E    T+   +N + + G 
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
                ++  ++  K   PT +T+  +IKGLC +  + +A+   + +   G   DQ++Y T
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I   CK   +  A QLL ++    ++P +  YN++ID +C    + +A  L   +    
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ 608
           I      Y  +I    A   ++ A+  F +M ++                       P+ 
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENIN--------------------PNV 271

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
               +++  F + G +     + A+M+K  + PD
Sbjct: 272 YTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPD 305


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 165/585 (28%), Positives = 278/585 (47%), Gaps = 40/585 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELD---LKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSET 59
           Y+R     DAV ++    + D   ++     +N LL  L       ++  +Y+++     
Sbjct: 134 YARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGI 193

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             +V T + +I  LC+  +++ A+L L+E +     P   +   +M  + + G  E A  
Sbjct: 194 QPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALR 253

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   M++ G  P   + N+LI+G C  G +E+AL +       G EPD +TY+    G  
Sbjct: 254 VKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLC 313

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               +S A KV+  +L +G DPD+ TY  +I    + G ++E   +   M+ +G   +  
Sbjct: 314 QNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTT 373

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            ++ L+ ++    R++EAL L  E+   GL PD+ T++ILI  LCK    H  I+L+ EM
Sbjct: 374 TFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM 433

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            S   +P+   +  ++  LC    +  A    + +  + C +  V YN +ID   K   I
Sbjct: 434 KSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRI 493

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA +++ Q+  + IS S VTFN+LI G CK  ++ DA  L++ +   GL+P+ +TY + 
Sbjct: 494 EEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSI 553

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +  YC++GNI++   +L+ M         VTY  +I GLCK  + Q A++LL  M + G+
Sbjct: 554 LTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGI 613

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P    YN +I+S  +  +LR A  L  +M      P + TY I+   LC  G       
Sbjct: 614 RPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGG------- 666

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
                                      G + +A  F  +MV KGF
Sbjct: 667 ---------------------------GPIKEAFDFLVEMVNKGF 684



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 158/577 (27%), Positives = 282/577 (48%), Gaps = 24/577 (4%)

Query: 70  IDGLCQQSRLQDAI-LFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           ++   +  R  DA+ L L +     FG     V  N +++   +    ++ + ++  M  
Sbjct: 131 VESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTG 190

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G+ PD  + N LI  LC A  +  A+    +M  HGV PD  T++ L +GF     I  
Sbjct: 191 RGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEA 250

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +V  K++  G  P  VT  VLI GYC++G VE+ L   +  ++ GF+ + + Y+  + 
Sbjct: 251 ALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVH 310

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C++G +  AL ++  M   G  PD+ TY+ +I  L K  ++ +A  + N+M  +   P
Sbjct: 311 GLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLP 370

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           ++     +++ L  +  + EA      L +     DV  +NI+I+   K+G+    ++L+
Sbjct: 371 DTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLF 430

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++     +P  VT+N LI   C  GK+ +A  LL+ ++ +G   S VTY T ++A C++
Sbjct: 431 EEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKK 490

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
             I+    +  +M+ + I  + VT+  +I GLCK  ++ +A +L+E M   G+ P+ ITY
Sbjct: 491 MRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITY 550

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           N+I+  +CK  +++KA  +L  M  +  E    TY  LI+GLC  G  + A  LL  ++ 
Sbjct: 551 NSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRI 610

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPP 606
             I  T  AY  +I++     ++  A+  F +M E                     G PP
Sbjct: 611 KGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEV--------------------GEPP 650

Query: 607 DQEICEVMLIAF-HQGGDLGSVFELAAVMIKSGLLPD 642
           D    +++  +    GG +   F+    M+  G +P+
Sbjct: 651 DALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPE 687



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 141/306 (46%), Gaps = 20/306 (6%)

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D V++N +++  V+   +     +Y ++  + I P +VT N+LI   C+  +V  A  +L
Sbjct: 161 DTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLML 220

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           + +  HG+ P   T+TT M  + EEG+I+  L +  +M      PT VT  V+I G CK 
Sbjct: 221 EEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKM 280

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++++A+  ++     G  PDQ+TYNT +   C+   +  A ++++ M     +P   TY
Sbjct: 281 GRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTY 340

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N +I+ L  NG+L  A  ++  + +         + T+I A  ++  + +A+    ++  
Sbjct: 341 NTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTV 400

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           KG                      PD     +++ A  + GD      L   M  SG  P
Sbjct: 401 KGLS--------------------PDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTP 440

Query: 642 DKFLIN 647
           D+   N
Sbjct: 441 DEVTYN 446



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 27/310 (8%)

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR---ISPSIVTFNSLIYGFCKNGKVADARR 399
            V+    ++ Y +L    +AV L    ++     +    V FN L+    +  K+     
Sbjct: 124 AVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLES 183

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           + + +   G++P  VT  T + A C    ++  + +L+EM +  + P   T+T +++G  
Sbjct: 184 VYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFI 243

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           ++  ++ A+++   M   G +P  +T N +I  +CK   +  A   + Q      EP   
Sbjct: 244 EEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQV 303

Query: 520 TYNILIDGLCVNGDLKNA-DCLLVSLQE-HNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
           TYN  + GLC NG + +A   + + LQE H+  +    Y T+I      G++ +A     
Sbjct: 304 TYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDV--FTYNTVINCLSKNGELDEAKGIVN 361

Query: 578 QMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
           QMV++G             C+       PD      +++A      L    +LA  +   
Sbjct: 362 QMVDRG-------------CL-------PDTTTFNTLIVALSSQNRLEEALDLARELTVK 401

Query: 638 GLLPDKFLIN 647
           GL PD +  N
Sbjct: 402 GLSPDVYTFN 411



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 113/286 (39%), Gaps = 23/286 (8%)

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L   L  +  +PS   +  ++      G       L+  ++  G +  AV   +F+ +Y 
Sbjct: 76  LNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYA 135

Query: 425 EEGNIQRLLAL-LQEMETKAIG--PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
                   + L L +++    G     V +  ++  L +  KL+    +  +M   G+ P
Sbjct: 136 RLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQP 195

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D +T NT+I++ C+   +R A  +L +M  H + P   T+  L+ G    G ++ A  + 
Sbjct: 196 DVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVK 255

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
             + E   S T V    +I  +C  G V  A+ +  Q +  GFE                
Sbjct: 256 AKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFE---------------- 299

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               PDQ      +    Q G +    ++  +M++ G  PD F  N
Sbjct: 300 ----PDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYN 341


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 165/559 (29%), Positives = 277/559 (49%), Gaps = 15/559 (2%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +L DAI    E       PS+V  N ++S   K+   ++   L   M    +  D +SYN
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           ILI+  C    +  AL     M + G EPD +T S L  G+    +IS A  ++ +++  
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  PD VT+  LI G        E + L + M+ +G + +++ Y  +++ +CK G ID A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L LL +ME   ++ D+V Y+ +I GLCK   +  A  L+N+M +K I P+ F + +++  
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC     ++A     ++I      +VV ++ +ID +VK G + EA +LY ++I++ I P 
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           I T++SLI GFC + ++ +A+ + + +      P+ VTY T +  +C+   ++  + L +
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM  + +    VTY  +I+GL +      A ++ + M   GV PD ITY+ ++   CK  
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            L KA  +   +    +EP   TYNI+I+G+C  G +++   L  SL    +    + YT
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG-----------FEISIRDYTKS----FFCMMLSN 602
           T+I   C +G   +A   F +M E G               +RD  K+        M S 
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSC 599

Query: 603 GFPPDQEICEVMLIAFHQG 621
           GF  D     +++   H G
Sbjct: 600 GFVGDASTISMVINMLHDG 618



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 271/516 (52%), Gaps = 19/516 (3%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
            IAKMK+ DL +S+      + NLR   I +DLY             + +I+I+  C++S
Sbjct: 89  AIAKMKKFDLVISL---GERMQNLR---ISYDLY-------------SYNILINCFCRRS 129

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +L  A+  L +     + P +V+L+++++ YC       A  L   M++ G  PD  ++N
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFN 189

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
            LIHGL +     EA+   + M + G +PD +TY  +  G      I  A  +++K+   
Sbjct: 190 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKG 249

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
             + D+V Y  +I G C+  ++++   L   M ++G + +V  Y+ L+S +C  GR  +A
Sbjct: 250 KIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDA 309

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             LL  M    + P++VT+S LI    K+ K+ +A +LY+EM  + I P+ F + +++ G
Sbjct: 310 SRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
            C  + + EA+  F+ +I  +C  +VV YN +I G+ K   + E ++L+R++ ++ +  +
Sbjct: 370 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            VT+N+LI G  + G    A+++   +   G+ P  +TY+  ++  C+ G +++ L + +
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            ++   + P   TY ++I+G+CK  K+++   L   + + GV P+ I Y T+I  FC+  
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
              +A  L  +M      P S  YN LI     +GD
Sbjct: 550 LKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGD 585



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 153/546 (28%), Positives = 263/546 (48%), Gaps = 15/546 (2%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A GLF  M++    P    +N L+  +      +  +     M    +  D  +Y+IL  
Sbjct: 64  AIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILIN 123

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F   SQ+  A  V+ K++  G +PDIVT + L+ GYC    + + + L + M+  G+K 
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 183

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + + ++ L+  +    +  EA+ L+ +M   G +PDLVTY  ++ GLCK+  +  A+ L 
Sbjct: 184 DTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLL 243

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M   +I  +   +  I+ GLC+ + I +A   F+ +       DV  YN +I      
Sbjct: 244 KKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNY 303

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   +A +L   +IE++I+P++VTF++LI  F K GK+ +A +L D +    ++P   TY
Sbjct: 304 GRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           ++ +N +C    +     + + M +K   P  VTY  +IKG CK  +++E ++L  +M  
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+  + +TYNT+I+   +  D   A ++  +M    + P   TY+IL+DGLC  G L+ 
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--S 594
           A  +   LQ+  +      Y  +I+  C  G V      FC +  KG + ++  YT   S
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543

Query: 595 FFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            FC              M  +G  PD      ++ A  + GD  +  EL   M   G + 
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVG 603

Query: 642 DKFLIN 647
           D   I+
Sbjct: 604 DASTIS 609



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 226/456 (49%), Gaps = 3/456 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y  +  + DAV ++ +M E+  K    T+N+L++ L           L D +       +
Sbjct: 160 YCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPD 219

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T   V++GLC++  +  A+  L++    +    VV  N I+   CK    + A  LF 
Sbjct: 220 LVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFN 279

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G+ PD F+YN LI  LC  G   +A    ++M    + P+ +T+S L   F    
Sbjct: 280 KMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEG 339

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A K+  +++ +  DPDI TY+ LI G+C    ++E   + E+M+S+    NV+ Y+
Sbjct: 340 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   CK+ R++E + L  EM   GL  + VTY+ LI+GL +      A +++ +M S 
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   +  +L GLC+   + +A + F+ L  S    D+  YNIMI+G  K G + + 
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L+  L  K + P+++ + ++I GFC+ G   +A  L   +K  G  P +  Y T + A
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA 579

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
              +G+      L++EM +        T ++VI  L
Sbjct: 580 RLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 255/491 (51%), Gaps = 1/491 (0%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           N +++   + G  +  K ++  ML+  + P+ ++YN +++G C  G++EEA ++ + +  
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            G++PD  TY+ L  G+     +  A+KV  ++ +KG   + V YT LI G C    ++E
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            + L   M        V  Y+VL+ S+C S R  EAL L+ EME  G+KP++ TY++LI 
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
            LC Q K  KA +L  +M  K + PN   + A++ G C++ MI +A    + +       
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           +   YN +I GY K  N+ +A+ +  +++E+++ P +VT+NSLI G C++G    A RLL
Sbjct: 427 NTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +   GL P   TYT+ +++ C+   ++    L   +E K + P  V YT +I G CK 
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            K+ EA  +LE M      P+ +T+N +I   C    L++A  L  +M    L+PT +T 
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
            ILI  L  +GD  +A      +           YTT I+ +C EG +  A     +M E
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665

Query: 582 KGFEISIRDYT 592
            G    +  Y+
Sbjct: 666 NGVSPDLFTYS 676



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/509 (29%), Positives = 251/509 (49%), Gaps = 21/509 (4%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           YN L++ L   G ++E  +   +M    V P+  TY+ +  G+  L  +  A + + K++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
             G DPD  TYT LI GYCQ  +++   K+   M  +G + N +AY+ L+  +C + RID
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           EA+ L  +M+     P + TY++LI+ LC  ++  +A+ L  EM    I PN   +  ++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
             LC +    +AR     ++    + +V+ YN +I+GY K G I +AV +   +  +++S
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+  T+N LI G+CK+  V  A  +L+ +    + P  VTY + ++  C  GN      L
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           L  M  + + P   TYT +I  LCK  +++EA  L + +   GV P+ + Y  +I  +CK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              + +A  +L +M   N  P S T+N LI GLC +G LK A  L   + +  +  T   
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
            T +I     +GD                     D+  S F  MLS+G  PD       +
Sbjct: 605 DTILIHRLLKDGDF--------------------DHAYSRFQQMLSSGTKPDAHTYTTFI 644

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
             + + G L    ++ A M ++G+ PD F
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPDLF 673



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 182/692 (26%), Positives = 320/692 (46%), Gaps = 81/692 (11%)

Query: 12  VHDAVFVI---AKMK-----ELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETP 60
           V DA++V+    KM      EL  K+ I  YN+LL +L      D M  +Y ++   +  
Sbjct: 156 VGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVC 215

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N+YT + +++G C+   +++A  ++ +       P   +  +++  YC+    + A  +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M   G   +  +Y  LIHGLC+A  ++EA++    M      P   TY++L K    
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             + S A  +++++   G  P+I TYTVLI   C     E+  +L   ML +G   NVI 
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L++  CK G I++A+ ++  ME+  L P+  TY+ LI+G CK + VHKA+ + N+M 
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454

Query: 301 SKRISPNSFAHGAILLG-----------------------------------LCEKEMIT 325
            +++ P+   + +++ G                                   LC+ + + 
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA   FDSL       +VV+Y  +IDGY K G + EA  +  +++ K   P+ +TFN+LI
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
           +G C +GK+ +A  L + +   GL+P+  T T  ++   ++G+     +  Q+M +    
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P   TYT  I+  C++ +L +A  ++  M   GV+PD  TY+++I+ +        AF +
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694

Query: 506 LNQMWLHNLEPTSATYNILIDG---------------LCVNGDLKNADC---LLVSLQEH 547
           L +M     EP+  T+  LI                 LC   ++   D    LL  + EH
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE-KGFEISIRDYTKSFFCM-------- 598
           +++    +Y  +I   C  G++  A   F  M   +G   S   +     C         
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814

Query: 599 -------MLSNGFPPDQEICEVMLIAFHQGGD 623
                  M+  G  P  E C+V++   ++ G+
Sbjct: 815 AAKVVDDMICVGHLPQLESCKVLICGLYKKGE 846



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 161/632 (25%), Positives = 285/632 (45%), Gaps = 65/632 (10%)

Query: 33  TYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
            Y  L++ L   R  D   DL+  +K  E    V T +++I  LC   R  +A+  ++E 
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                 P++ +   ++   C     E A+ L   ML+ GL P+  +YN LI+G C  G +
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           E+A++    M    + P+  TY+ L KG+   S +  A  V+ K+L +   PD+VTY  L
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSL 468

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G C+ GN +   +L  +M  +G   +   Y+ ++ S+CKS R++EA  L   +E  G+
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P++V Y+ LI G CK  KV +A  +  +M SK   PNS    A++ GLC    + EA +
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             + ++       V    I+I   +K G+   A   ++Q++     P   T+ + I  +C
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY--------------------CEEGN- 428
           + G++ DA  ++  ++ +G+ P   TY++ +  Y                    CE    
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708

Query: 429 -----IQRLLA---------------------------LLQEMETKAIGPTHVTYTVVIK 456
                I+ LL                            LL++M   ++ P   +Y  +I 
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768

Query: 457 GLCKQWKLQEAVQLLEDMYVI-GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           G+C+   L+ A ++ + M    G++P ++ +N ++   CK K   +A ++++ M      
Sbjct: 769 GICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL 828

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   +  +LI GL   G+ +    +  +L +      ++A+  II     +G V      
Sbjct: 829 PQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYEL 888

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
           F  M + G + S + Y+      +L  G PPD
Sbjct: 889 FNVMEKNGCKFSSQTYS------LLIEG-PPD 913



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 230/466 (49%), Gaps = 25/466 (5%)

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           I+ L+IK  D   V   + +   C+  N +E  +L+       +KL +  Y+ LL+S+ +
Sbjct: 145 IRLLMIKSCDS--VGDALYVLDLCRKMNKDERFELK-------YKLIIGCYNTLLNSLAR 195

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G +DE   +  EM    + P++ TY+ ++ G CK   V +A Q  +++    + P+ F 
Sbjct: 196 FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + ++++G C+++ +  A   F+ + +  C ++ V Y  +I G      I EA+ L+ ++ 
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           +    P++ T+  LI   C + + ++A  L+  ++  G++P+  TYT  +++ C +   +
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           +   LL +M  K + P  +TY  +I G CK+  +++AV ++E M    ++P+  TYN +I
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
           + +CK  ++ KA  +LN+M    + P   TYN LIDG C +G+  +A  LL  + +  + 
Sbjct: 436 KGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC----------- 597
             +  YT++I + C    V +A   F  + +KG   ++  YT     +C           
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554

Query: 598 --MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
              MLS    P+      ++      G L     L   M+K GL P
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 126/544 (23%), Positives = 246/544 (45%), Gaps = 58/544 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y + GM+ DAV V+  M+   L  + +TYN L                            
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNEL---------------------------- 434

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
               I G C +S +  A+  L +   ++  P VV+ N+++   C+ G  + A  L  LM 
Sbjct: 435 ----IKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             GL PD ++Y  +I  LC +  +EEA +  + + + GV P+ + Y+ L  G+    ++ 
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  +++K+L K   P+ +T+  LI G C  G ++E   L E M+  G +  V   ++L+
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             + K G  D A     +M + G KPD  TY+  I+  C++ ++  A  +  +M    +S
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIM---SNCIQDVVLYNIMIDGYVK------- 355
           P+ F + +++ G  +   + +    FD L     + C      +  +I   ++       
Sbjct: 670 PDLFTYSSLIKGYGD---LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK 726

Query: 356 --------LGNIGE---AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
                   + N+ E    V+L  +++E  ++P+  ++  LI G C+ G +  A ++ D +
Sbjct: 727 GSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786

Query: 405 KLH-GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           + + G+ PS + +   ++  C+         ++ +M      P   +  V+I GL K+ +
Sbjct: 787 QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGE 846

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
            +    + +++   G   D++ +  II    K   +   ++L N M  +  + +S TY++
Sbjct: 847 KERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSL 906

Query: 524 LIDG 527
           LI+G
Sbjct: 907 LIEG 910


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 156/562 (27%), Positives = 276/562 (49%), Gaps = 67/562 (11%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++IDG C+  ++ DA+  L E        ++   N++++ YCK G    A+G+   M+ +
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            L PD++SYN L+ G C  G   EA    + M + G+EP  +TY+ L KG   +     A
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++   ++  G  PD V Y+ L+ G  ++ N E    L + +L++GF  + I ++ ++S 
Sbjct: 457 LQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 516

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA--------------- 292
           +CK G++ EA  +  +M+ +G  PD +TY  LI G CK   V +A               
Sbjct: 517 LCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPS 576

Query: 293 IQLYN--------------------EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           I++YN                    EM  + ++PN   +GA++ G C++ M+ +A   + 
Sbjct: 577 IEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYF 636

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE--------------------K 372
            +  +    ++++ + M+ G  +LG I EA  L +++++                    +
Sbjct: 637 EMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQ 696

Query: 373 RIS------------PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +I+            P+ + +N  I G CK GKV DARR    + L G  P   TY T +
Sbjct: 697 KIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLI 756

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + Y   GN+     L  EM  + + P  VTY  +I GLCK   +  A +L   ++  G+ 
Sbjct: 757 HGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLF 816

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ +TYNT+I  +CK  ++  AF+L ++M    + P+  TY+ LI+GLC +GD++ +  L
Sbjct: 817 PNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKL 876

Query: 541 LVSLQEHNISLTKVAYTTIIKA 562
           L  + +  +    + Y T+++ 
Sbjct: 877 LNQMIKAGVDSKLIEYCTLVQG 898



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 173/654 (26%), Positives = 301/654 (46%), Gaps = 65/654 (9%)

Query: 45  DIMWD----LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGK-EFGPSVV 99
           +++WD    +Y +   S T  ++     V  GL + +      L++ +  GK    PS+ 
Sbjct: 139 NVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNA------LYVFDNMGKCGRIPSLR 192

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           S N++++   K G    A  ++  M++ G+ PD F  +I+++  C  G ++EA  F   M
Sbjct: 193 SCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKM 252

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT------------ 207
              GVEP+ +TY  L  G+  L  +  A  V++ +  KG   ++VTYT            
Sbjct: 253 ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKM 312

Query: 208 ------------------------VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
                                   VLI GYC+ G +++ ++L + ML  G K N+   + 
Sbjct: 313 DEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNS 372

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++  CK G I EA G++  M    LKPD  +Y+ L+ G C++    +A  L ++M  + 
Sbjct: 373 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 432

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I P    +  +L GLC      +A   +  ++      D V Y+ ++DG  K+ N   A 
Sbjct: 433 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGAS 492

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L++ ++ +  + S +TFN++I G CK GK+ +A  + D +K  G  P  +TY T ++ Y
Sbjct: 493 TLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 552

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+  N+ +   +   ME + I P+   Y  +I GL K  +L E   LL +M + G+TP+ 
Sbjct: 553 CKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNI 612

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TY  +I  +CK   L KAF    +M  + L       + ++ GL   G +  A+ L+  
Sbjct: 613 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 672

Query: 544 LQEHNISL-------TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR------- 589
           + +H           + + Y  I K   +  +  K       +V   + I+I        
Sbjct: 673 MVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIV---YNIAIAGLCKTGK 729

Query: 590 -DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            D  + FF M+   GF PD      ++  +   G++   F L   M++ GL+P+
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 783



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 260/568 (45%), Gaps = 57/568 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN--------------LRHTDIMWDLY 51
           Y RTG + DAV ++ +M  L LK ++   NSL+                 R  D  W+L 
Sbjct: 342 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD--WNLK 399

Query: 52  DDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
            D          Y+ + ++DG C++    +A     +   +   P+V++ N ++   C++
Sbjct: 400 PD---------SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G  + A  ++ LM+K G+ PD   Y+ L+ GL    + E A     D+   G     IT+
Sbjct: 451 GAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + +  G   + ++  A ++  K+   G  PD +TY  LI GYC+  NV +  K++  M  
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +    ++  Y+ L+S + KS R+ E   LL EM   GL P++VTY  LI G CK+  + K
Sbjct: 571 EXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 630

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM----------------YFDSLI 335
           A   Y EM    +S N      ++ GL     I EA +                +  S I
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 690

Query: 336 MSNCIQDV----------------VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
               IQ +                ++YNI I G  K G + +A + +  L  K   P   
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 750

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T+ +LI+G+   G V +A RL D +   GL P+ VTY   +N  C+  N+ R   L  ++
Sbjct: 751 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 810

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
             K + P  VTY  +I G CK   +  A +L + M   G++P  +TY+ +I   CK  D+
Sbjct: 811 HQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDI 870

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDG 527
            ++ +LLNQM    ++     Y  L+ G
Sbjct: 871 ERSMKLLNQMIKAGVDSKLIEYCTLVQG 898



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 227/510 (44%), Gaps = 79/510 (15%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI------MWDLYDDIKVSET 59
           Y R G   +A  +  KM +  ++ ++ TYN+LL  L           +W L   +K    
Sbjct: 412 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLM--MKXGVA 469

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P  V   S ++DGL +    + A    ++   + F  S ++ N ++S  CK+G    A+ 
Sbjct: 470 PDEV-GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE 528

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F  M   G  PD  +Y  LI G C A ++ +A +    M R  + P    Y+ L  G  
Sbjct: 529 IFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLF 588

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC------------------------- 214
              ++     ++ ++ I+G  P+IVTY  LI G+C                         
Sbjct: 589 KSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANII 648

Query: 215 ----------QIGNVEEGLKLREVMLSQGF------------------KL---------- 236
                     ++G ++E   L + M+  GF                  K+          
Sbjct: 649 ICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKT 708

Query: 237 ----NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
               N I Y++ ++ +CK+G++D+A      +   G  PD  TY  LI G      V +A
Sbjct: 709 FLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEA 768

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            +L +EM  + + PN   + A++ GLC+ E +  A+  F  L       +VV YN +IDG
Sbjct: 769 FRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDG 828

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           Y K+GN+  A +L  ++IE+ ISPS+VT+++LI G CK+G +  + +LL+ +   G++  
Sbjct: 829 YCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSK 888

Query: 413 AVTYTTFMNAYCEEGN---IQRLLALLQEM 439
            + Y T +    +  N   + +  AL Q M
Sbjct: 889 LIEYCTLVQGGFKTSNYNEMSKPEALKQNM 918



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 191/413 (46%), Gaps = 37/413 (8%)

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           Q F+ NV +Y  L+  + +    DE    L ++       DL  +    RG    D++  
Sbjct: 96  QNFRPNVKSYCKLVHILSRGRMYDETRAYLNQL------VDLCKFKD--RGNVIWDEL-- 145

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
            + +Y E      SP  F    IL    EK +   A   FD++     I  +   N +++
Sbjct: 146 -VGVYREFA---FSPTVF--DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLN 199

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
             VK G    A  +Y+Q+I   I P +   + ++  FCK+GKV +A   +  ++  G+EP
Sbjct: 200 NLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEP 259

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + VTY + +N Y   G+++    +L+ M  K +    VTYT++IKG CKQ K+ EA ++L
Sbjct: 260 NIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVL 319

Query: 472 EDMY-VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
             M     + PD+  Y  +I  +C+   +  A +LL++M    L+      N LI+G C 
Sbjct: 320 RGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCK 379

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            G++  A+ ++  + + N+     +Y T++  +C EG   +A     +M+++G E ++  
Sbjct: 380 RGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLT 439

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           Y                + +C V        G      ++  +M+K G+ PD+
Sbjct: 440 YNTLL------------KGLCRV--------GAFDDALQIWHLMMKXGVAPDE 472



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/347 (22%), Positives = 143/347 (41%), Gaps = 37/347 (10%)

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +   PN  ++  ++  L    M  E R Y + L+     +D    N++ D         E
Sbjct: 96  QNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKD--RGNVIWD---------E 144

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            V +YR+      SP++  F+ ++  + + G   +A  + D +   G  PS  +  + +N
Sbjct: 145 LVGVYREFA---FSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLN 199

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
              + G       + Q+M    I P     ++++   CK  K+ EA   ++ M  +GV P
Sbjct: 200 NLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEP 259

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           + +TY+++I  +    D+  A  +L  M    +     TY +LI G C    +  A+ +L
Sbjct: 260 NIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVL 319

Query: 542 VSLQEHN-ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
             +QE   +   + AY  +I  +C  G +  A+    +M+  G +      T  F C  L
Sbjct: 320 RGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLK------TNLFICNSL 373

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            NG+    EI E       +G        +   M+   L PD +  N
Sbjct: 374 INGYCKRGEIHEA------EG--------VITRMVDWNLKPDSYSYN 406


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/489 (30%), Positives = 256/489 (52%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PSVV     +    K         L   M  +G+  + +S NILI+ LC    +  A+  
Sbjct: 90  PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISV 149

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + G++PDAIT++ L  G  +  +I  A  +  +++ +G  PD+++Y+ +I G C+
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCK 209

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            GN    L+L   M  +G K N++AY+ ++ S+CK   +++A+ LL EM   G+ PD+VT
Sbjct: 210 SGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVT 269

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           YS ++ G C    +++A  L+NEM  + + PN+     ++ GLC++ M++EAR  F+++ 
Sbjct: 270 YSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMT 329

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 +   YN ++DGY     + EA ++   +++K  +P + ++N LI G+CK  ++ 
Sbjct: 330 KKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLD 389

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A+ LL  +    L P  VTY+T M   C+ G  Q  L L +EM +  + P  +TY+ ++
Sbjct: 390 EAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLL 449

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLCK   L EA++LL+ M    + PD + YN +I        L  A +L ++++   ++
Sbjct: 450 DGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQ 509

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           PT  TY I+I GL   G    A  L   +++        +Y  II+      D   A+  
Sbjct: 510 PTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRL 569

Query: 576 FCQMVEKGF 584
             +MV K F
Sbjct: 570 IDEMVGKRF 578



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 241/464 (51%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  ML+    P    +   +  +         +   N M   GV  +  + +IL      
Sbjct: 80  FYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCR 139

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L+ +  A  V+ K+   G  PD +T+  LI G C  G ++E + L   M+ +G + +VI+
Sbjct: 140 LNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVIS 199

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS +++ +CKSG    AL LL +ME  G KP+LV Y+ +I  LCK   V+ A+ L +EM 
Sbjct: 200 YSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMV 259

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            + I P+   +  IL G C    + EA + F+ ++  N + + V + I++DG  K G + 
Sbjct: 260 DRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVS 319

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  ++  + +K   P+  T+N+L+ G+C N ++ +A+++LD +   G  P   +Y   +
Sbjct: 320 EARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILI 379

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YC+   +    +LL EM  K + P  VTY+ +++GLC+  + QEA+ L ++M   G+ 
Sbjct: 380 NGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLL 439

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +TY+T++   CK   L +A +LL  M    +EP    YNILI+G+ + G L+ A  L
Sbjct: 440 PDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKEL 499

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
              L    I  T   YT +IK    EG   +A   F +M + GF
Sbjct: 500 FSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGF 543



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 238/465 (51%), Gaps = 35/465 (7%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           +V SLN +++  C+L     A  +   M K G+ PDA ++N LI+G CI G ++EA+   
Sbjct: 126 NVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLF 185

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           N+M R G +PD I+YS +  G       S A ++++K+  KG  P++V YT +I   C+ 
Sbjct: 186 NEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKD 245

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
             V + + L   M+ +G   +V+ YS +L   C  G ++EA  L  EM    + P+ VT+
Sbjct: 246 TLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTF 305

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +IL+ GLCK+  V +A  ++  M  K   PN++ + A++ G C    + EA+   D ++ 
Sbjct: 306 TILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVD 365

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
             C   V  YNI+I+GY K   + EA  L  ++ EK ++P  VT+++L+ G C+ G+  +
Sbjct: 366 KGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQE 425

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME---------------- 440
           A  L   +   GL P  +TY+T ++  C+ G++   L LL+ M+                
Sbjct: 426 ALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIE 485

Query: 441 -------------------TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
                                 I PT  TYT++IKGL K+    EA +L   M   G  P
Sbjct: 486 GMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLP 545

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           +  +YN II+ F + +D   A +L+++M        S+T+ +L+D
Sbjct: 546 NSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 240/503 (47%), Gaps = 15/503 (2%)

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           S+++AL     M R    P  + +           Q S    +  ++ + G   ++ +  
Sbjct: 72  SIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 131

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +LI   C++ +V   + +   M   G + + I ++ L++  C  G I EA+GL  EM   
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRR 191

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G +PD+++YS +I GLCK      A+QL  +M  K   PN  A+  I+  LC+  ++ +A
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDA 251

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                 ++      DVV Y+ ++ G+  LG++ EA  L+ +++ + + P+ VTF  L+ G
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G V++AR + + +   G EP+A TY   M+ YC    +     +L  M  K   P 
Sbjct: 312 LCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPV 371

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             +Y ++I G CK+ +L EA  LL +M    +TPD +TY+T+++  C+    ++A  L  
Sbjct: 372 VHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFK 431

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M    L P   TY+ L+DGLC +G L  A  LL S+QE  I    V Y  +I+     G
Sbjct: 432 EMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAG 491

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICE 612
            +  A   F ++   G + +IR YT                  F  M  +GF P+     
Sbjct: 492 KLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYN 551

Query: 613 VMLIAFHQGGDLGSVFELAAVMI 635
           V++  F Q  D  +   L   M+
Sbjct: 552 VIIQGFLQNQDSSTAIRLIDEMV 574


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 262/507 (51%), Gaps = 17/507 (3%)

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           + PS+++ NA++           A+ L   ML+ G+ P+ ++YNIL+  LC  G  EEAL
Sbjct: 116 YAPSLLAYNAVLLALSDASLPS-ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEAL 174

Query: 154 EFT-NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
               +DM   G  P+ +TY+ L   F    ++  A +++  +   G  P +VT+  ++ G
Sbjct: 175 GVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNG 234

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            C+ G +E+  K+ + M  +G   + ++Y+ L+S  CK+G + EAL +  EM   G+ PD
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VT++ LI  +C+   + +A+ L  +M  + +  N F   A++ G C    + +A +   
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +        VV YN++I+GY KLG + EA +L  ++  K + P +VT+++++ G+CK G
Sbjct: 355 EMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
               A  L   +   G+ P A+TY++ +   CEE  +     L ++M    + P   TYT
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYT 474

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I G CK+  +Q+A+ L ++M   GV PD +TY+ +I    K    ++A +LL +++  
Sbjct: 475 TLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYE 534

Query: 513 NLEPTSATYN---------------ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
           +  P +  Y                 L+ G  + G +  AD +  S+ + +  L    Y+
Sbjct: 535 DPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYS 594

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            +I  HC  G++ KA++F  Q++  GF
Sbjct: 595 VLIHGHCRGGNIMKALSFHKQLLRCGF 621



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 257/519 (49%), Gaps = 56/519 (10%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFL-QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           NVYT +I++  LC + + ++A+  +  +  G    P+VV+ N +++ +C+ G  + A+ L
Sbjct: 153 NVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERL 212

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             +M + G+ P   ++N +++GLC AG ME+A +  ++M R G+ PD ++Y+ L  G+  
Sbjct: 213 VGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCK 272

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN--- 237
              +  A  V  ++  KG  PD+VT+T LI   C+ GN+E  + L   M  +G ++N   
Sbjct: 273 AGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFT 332

Query: 238 --------------------------------VIAYSVLLSSMCKSGRIDEALGLLYEME 265
                                           V+ Y+VL++  CK GR+DEA  L++EME
Sbjct: 333 FTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEME 392

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
           A G+KPD+VTYS ++ G CK      A +L  +M  K + P++  + +++ GLCE+  + 
Sbjct: 393 AKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLG 452

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +A   F+ ++      D   Y  +IDG+ K GN+ +A+ L+ ++I+K + P +VT++ LI
Sbjct: 453 DACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLI 512

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G  K+ +  +A+RLL  +      P  + Y   M+  C     + ++ALL+    K  G
Sbjct: 513 DGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHC-CRTAEFKSVVALLKGFSMK--G 569

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
             +    V    L + WKL  +V                 Y+ +I   C+  ++ KA   
Sbjct: 570 LMNQADKVYQSMLDRHWKLDGSV-----------------YSVLIHGHCRGGNIMKALSF 612

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
             Q+      P S +   L+ GL   G    AD ++  L
Sbjct: 613 HKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 226/457 (49%), Gaps = 20/457 (4%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDI-KVS 57
           L   + R G V  A  ++  M+E  ++ S+ T+N+++  L     M D   ++D++ +  
Sbjct: 196 LVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREG 255

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            TP  V  N++V  G C+   L +A+    E A K   P VV+  +++   C+ G  E A
Sbjct: 256 LTPDGVSYNTLV-SGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERA 314

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M + GL  + F++  LI G C  G +++AL    +M    ++P  + Y++L  G
Sbjct: 315 VALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLING 374

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +  L ++  A ++I ++  KG  PD+VTY+ ++ GYC+IG+ +   +L   ML +G   +
Sbjct: 375 YCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPD 434

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            I YS L+  +C+  R+ +A  L  +M  +GL+PD  TY+ LI G CK+  V KA+ L++
Sbjct: 435 AITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHD 494

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN---------- 347
           EM  K + P+   +  ++ GL +     EA+     L   + + D + Y           
Sbjct: 495 EMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAE 554

Query: 348 -----IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
                 ++ G+   G + +A ++Y+ ++++        ++ LI+G C+ G +  A     
Sbjct: 555 FKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHK 614

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
            +   G  P++ +  + +    EEG       ++QE+
Sbjct: 615 QLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 203/431 (47%), Gaps = 72/431 (16%)

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  P ++ Y  ++       ++    +L   ML  G   NV  Y++L+ ++C  G+ +EA
Sbjct: 115 GYAPSLLAYNAVLLALSD-ASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 258 LGLLYE-MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           LG++ + M   G  P++VTY+ L+   C+  +V  A +L   M    + P+         
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPS--------- 224

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
                                     +V +N +++G  K G + +A +++ ++  + ++P
Sbjct: 225 --------------------------LVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTP 258

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
             V++N+L+ G+CK G + +A  +   +   G+ P  VT+T+ ++A C  GN++R +AL+
Sbjct: 259 DGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALV 318

Query: 437 QEMETKA-----------------------------------IGPTHVTYTVVIKGLCKQ 461
            +M  +                                    I P+ V Y V+I G CK 
Sbjct: 319 GQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKL 378

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++ EA +L+ +M   G+ PD +TY+TI+  +CK  D   AF+L  +M    + P + TY
Sbjct: 379 GRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITY 438

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           + LI GLC    L +A  L   + +  +   +  YTT+I  HC EG+V KA++   +M++
Sbjct: 439 SSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIK 498

Query: 582 KGFEISIRDYT 592
           KG    +  Y+
Sbjct: 499 KGVLPDVVTYS 509



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 188/399 (47%), Gaps = 53/399 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G +H+A+ V A+M +  +   + T+ SL++ +    + +    L   ++      N
Sbjct: 270 YCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMN 329

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T + +IDG C+   L DA+L ++E       PSVV  N +++ YCKLG  + A+ L  
Sbjct: 330 EFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIH 389

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G+ PD  +Y+ ++ G C  G  + A E    M + GV PDAITYS L +G     
Sbjct: 390 EMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEER 449

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A ++ +K+L  G  PD  TYT LI G+C+ GNV++ L L + M+ +G   +V+ YS
Sbjct: 450 RLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYS 509

Query: 243 VLLSSMCKSGRIDEALGLLYEM------------EAV----------------------G 268
           VL+  + KS R  EA  LL+++            EA+                      G
Sbjct: 510 VLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKG 569

Query: 269 L----------------KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           L                K D   YS+LI G C+   + KA+  + ++     SPNS +  
Sbjct: 570 LMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTI 629

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           +++ GL E+ M  EA      L+    + D      +ID
Sbjct: 630 SLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALID 668



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 112/238 (47%), Gaps = 22/238 (9%)

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G  PS + Y   + A   + ++     LL  M    + P   TY ++++ LC + + +EA
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 468 VQLL-EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           + ++ +DM   G  P+ +TYNT++ +FC+  ++  A +L+  M    + P+  T+N +++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           GLC  G +++A  +   +    ++   V+Y T++  +C  G +H+A+  F +M +     
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQ----- 288

Query: 587 SIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                           G  PD      ++ A  + G+L     L   M + GL  ++F
Sbjct: 289 ---------------KGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEF 331


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/526 (30%), Positives = 278/526 (52%), Gaps = 3/526 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAK 118
           NV++ +I++ GLC ++R Q+A+  L   A    G   P VVS   +++ + K G ++ A 
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 216

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             +  ML  G+ PD  +YN +I  LC A +M++A+E  N M ++GV PD +TY+ +  G+
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 276

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               Q   A   ++K+   G +PD+VTY++L+   C+ G   E  K+ + M  +G K  +
Sbjct: 277 CSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y  LL      G + E  GLL  M   G+ PD   +SILI    KQ KV +A+ ++++
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSK 396

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  + ++PN+  +GA++  LC+   + +A +YF+ +I        ++YN +I G      
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
              A +L  +++++ I  + + FNS+I   CK G+V ++ +L + +   G++P+ +TY T
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +N YC  G +   + LL  M +  + P  VTY+ +I G CK  ++++A+ L ++M   G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           V+PD ITYN I++   + +    A +L  ++     +   +TYNI++ GLC N    +A 
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            +  +L   ++ L    +  +I A    G   +A   F      G 
Sbjct: 637 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682



 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 172/627 (27%), Positives = 308/627 (49%), Gaps = 43/627 (6%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLY--DDIKVSETPRNVYTNSIVID 71
           V+ +M EL    ++ +YN LL  L    R  + +  L+   D +   +P +V + + VI+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           G  ++     A     E   +   P VV+ N+I++  CK    + A  +   M+K G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  +YN ++HG C +G  +EA+ F   M   GVEPD +TYS+L        +   A K+ 
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             +  +G  P+I TY  L+ GY   G + E   L ++M+  G   +   +S+L+ +  K 
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G++D+A+ +  +M   GL P+ VTY  +I  LCK  +V  A+  + +M  + +SP +  +
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
            +++ GLC       A      ++      + + +N +ID + K G + E+ +L+  ++ 
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
             + P+++T+N+LI G+C  GK+ +A +LL  +   GL+P+ VTY+T +N YC+   ++ 
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            L L +EME+  + P  +TY ++++GL +  +   A +L   +   G   +  TYN I+ 
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILH 624

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID---------------------GLCV 530
             CK K    A Q+   + L +L+  + T+NI+ID                     GL  
Sbjct: 625 GLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 684

Query: 531 N--------------GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           N              G L+  D L +S++++  ++       I++     G++ +A T+ 
Sbjct: 685 NYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 744

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNG 603
             + EK F  S+   T S F  +LS G
Sbjct: 745 SMIDEKHF--SLEASTASLFIDLLSGG 769



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/581 (24%), Positives = 267/581 (45%), Gaps = 23/581 (3%)

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG---LHPDAFSY 136
           +DA     E   +  G S+  LN  ++   +   A  A   +  M + G   + PD  +Y
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGADEVTPDLCTY 90

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
            ILI   C AG ++       ++ + G   DAI ++ L KG     + S A  ++ + + 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 197 K-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ---GFKLNVIAYSVLLSSMCKSG 252
           + G  P++ +Y +L+ G C     +E L+L  +M      G   +V++Y+ +++   K G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
             D+A    +EM   G+ PD+VTY+ +I  LCK   + KA+++ N M    + P+   + 
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           +IL G C      EA  +   +       DVV Y++++D   K G   EA +++  + ++
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            + P I T+ +L+ G+   G + +   LLD +  +G+ P    ++  + AY ++G + + 
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           + +  +M  + + P  VTY  VI  LCK  ++++A+   E M   G++P  I YN++I  
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            C C    +A +L+ +M    +   +  +N +ID  C  G +  ++ L   +    +   
Sbjct: 451 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFC 597
            + Y T+I  +C  G + +AM     MV  G + +   Y+                  F 
Sbjct: 511 VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
            M S+G  PD     ++L    Q     +  EL   + +SG
Sbjct: 571 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 233/496 (46%), Gaps = 54/496 (10%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           PD+ TY +LI   C+ G ++ G      ++ +GF+++ IA++ LL  +C   R  +A+ +
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 261 -LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL------------------------ 295
            L  M  +G  P++ +Y+IL++GLC +++  +A++L                        
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 296 --------------YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
                         Y+EM  + I P+   + +I+  LC+ + + +A    ++++ +  + 
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D + YN ++ GY   G   EA+   +++    + P +VT++ L+   CKNG+  +AR++ 
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           D++   GL+P   TY T +  Y  +G +  +  LL  M    I P H  ++++I    KQ
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            K+ +A+ +   M   G+ P+ +TY  +I   CK   +  A     QM    L P +  Y
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N LI GLC     + A+ L++ + +  I L  + + +II +HC EG V ++   F  MV 
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504

Query: 582 KGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGS 626
            G + ++  Y    + +C+             M+S G  P+      ++  + +   +  
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564

Query: 627 VFELAAVMIKSGLLPD 642
              L   M  SG+ PD
Sbjct: 565 ALVLFKEMESSGVSPD 580



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 197/405 (48%), Gaps = 6/405 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y++ G V  A+ V +KM++  L  +  TY +++  L    R  D M      I  
Sbjct: 376 ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
             +P N+  NS+ I GLC  ++ + A   + E   +    + +  N+I+  +CK G    
Sbjct: 436 GLSPGNIVYNSL-IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           ++ LF LM++ G+ P+  +YN LI+G C+AG M+EA++  + M   G++P+ +TYS L  
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+  +S++  A  + +++   G  PDI+TY +++ G  Q        +L   +   G ++
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 614

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +  Y+++L  +CK+   D+AL +   +  + LK +  T++I+I  L K  +  +A  L+
Sbjct: 615 ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
               S  + PN + +  +   +  + ++ E    F S+  + C  D  + N ++   ++ 
Sbjct: 675 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 734

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           G I  A      + EK  S    T  SL       GK  +  R L
Sbjct: 735 GEITRAGTYLSMIDEKHFSLEAST-ASLFIDLLSGGKYQEYYRFL 778


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 167/610 (27%), Positives = 282/610 (46%), Gaps = 32/610 (5%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL+ D+  S    +V     ++  + +  R    I   Q+   K+    + S   ++  +
Sbjct: 65  DLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCF 124

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           C       A   F  + K GLHPD  ++N L+HGLC+   + EAL   + M      P+ 
Sbjct: 125 CSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 184

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LRE 227
           +T++ L  G     +I  A  ++ +++  G  P  +TY  ++ G C+IG+    L  LR+
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRK 244

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
           +        NV+ YS ++ S+CK GR  +A  L  EM+  G+ PDL TY+ +I G C   
Sbjct: 245 MEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +   A QL  EM  ++ISP+   + A++    ++    EA   +D ++    I + + Y+
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            MIDG+ K   +  A  ++  +  K  SP+++TFN+LI G+C   ++ D   LL  +   
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET 424

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           GL     TY T ++ +   G++   L LLQEM +  + P  VT   ++ GLC   KL++A
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484

Query: 468 VQLLEDMY-----------VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           +++ + M              GV PD  TYN +I          +A +L  +M    + P
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            + TY+ +IDGLC    L  A  +  S+   + S   V +TT+I  +C  G V   +  F
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           C+M  +G   +   Y                      ++  F + G++    ++   MI 
Sbjct: 605 CEMGRRGIVANAITYI--------------------TLICGFRKVGNINGALDIFQEMIS 644

Query: 637 SGLLPDKFLI 646
           SG+ PD   I
Sbjct: 645 SGVYPDTITI 654



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/569 (26%), Positives = 270/569 (47%), Gaps = 15/569 (2%)

Query: 37  LLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGP 96
           ++  +   D++  LY  ++  +   ++Y+ +I+I   C  S+L  A+    +       P
Sbjct: 88  VVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHP 147

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
            VV+ N ++   C       A  LF  M +    P+  ++  L++GLC  G + EA+   
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL-LIKGSDPDIVTYTVLICGYCQ 215
           + M   G++P  ITY  +  G   +     A  +++K+  I    P++V Y+ +I   C+
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCK 267

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G   +   L   M  +G   ++  Y+ ++   C SGR  +A  LL EM    + PD+VT
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI    K+ K  +A +LY+EM  + I PN+  + +++ G C++  +  A   F  + 
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C  +++ +N +IDGY     I + ++L  ++ E  +     T+N+LI+GF   G + 
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET-----------KAI 444
            A  LL  +   GL P  VT  T ++  C+ G ++  L + + M+              +
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P   TY ++I GL  + K  EA +L E+M   G+ PD ITY+++I   CK   L +A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           + + M   +  P   T+  LI+G C  G + +   L   +    I    + Y T+I    
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 565 AEGDVHKAMTFFCQMVEKGF---EISIRD 590
             G+++ A+  F +M+  G     I+IR+
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRN 656



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 266/547 (48%), Gaps = 50/547 (9%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVID 71
           A+    K+ +L L   + T+N+LL+ L   D +    +L+  +  +    NV T + +++
Sbjct: 133 ALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192

Query: 72  GLCQQSRLQDAILFL-----------QETAGK------EFG------------------- 95
           GLC++ R+ +A+  L           Q T G       + G                   
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHII 252

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+VV  +AI+   CK G    A+ LF  M + G+ PD F+YN +I G C +G   +A + 
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M    + PD +TY+ L   F    +   A ++  ++L +G  P+ +TY+ +I G+C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              ++    +  +M ++G   N+I ++ L+   C + RID+ + LL+EM   GL  D  T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G      ++ A+ L  EM S  + P+      +L GLC+   + +A   F  + 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 336 MS----------NCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            S          N ++ DV  YNI+I G +  G   EA +LY ++  + I P  +T++S+
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G CK  ++ +A ++ D++      P+ VT+TT +N YC+ G +   L L  EM  + I
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
               +TY  +I G  K   +  A+ + ++M   GV PD IT   ++      ++L++A  
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA 672

Query: 505 LLNQMWL 511
           +L ++ +
Sbjct: 673 MLEKLQM 679



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 212/414 (51%), Gaps = 16/414 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
           + G   DA  +  +M+E  +   + TYNS++       R +D    L + ++   +P +V
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP-DV 325

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +I+   ++ +  +A     E   +   P+ ++ ++++  +CK    + A+ +F L
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G  P+  ++N LI G C A  +++ +E  ++M   G+  D  TY+ L  GF+L+  
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS-----------Q 232
           ++ A  ++Q+++  G  PDIVT   L+ G C  G +++ L++ +VM              
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G + +V  Y++L+S +   G+  EA  L  EM   G+ PD +TYS +I GLCKQ ++ +A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            Q+++ M SK  SPN      ++ G C+   + +    F  +     + + + Y  +I G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           + K+GNI  A+ +++++I   + P  +T  +++ G     ++  A  +L+ +++
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 176/383 (45%), Gaps = 53/383 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           +  +G   DA  ++ +M E  +   + TYN+L+         ++   LYD++       N
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T S +IDG C+Q+RL  A       A K   P++++ N ++  YC  G   +  G+  
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC--GAKRIDDGMEL 417

Query: 123 L--MLKYGLHPDAFSYNILIHG-----------------------------------LCI 145
           L  M + GL  D  +YN LIHG                                   LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 146 AGSMEEALEFTNDMGR-----------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
            G +++ALE    M +           +GVEPD  TY+IL  G     +   A ++ +++
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             +G  PD +TY+ +I G C+   ++E  ++ + M S+ F  NV+ ++ L++  CK+GR+
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D+ L L  EM   G+  + +TY  LI G  K   ++ A+ ++ EM S  + P++     +
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 315 LLGLCEKEMITEARMYFDSLIMS 337
           L GL  KE +  A    + L MS
Sbjct: 658 LTGLWSKEELKRAVAMLEKLQMS 680



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 128/292 (43%), Gaps = 21/292 (7%)

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G+ ++  + +A+ L+  ++  R  PS+V F  L+    +  +      L   ++   +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
              ++T  +  +C    +   L+   ++    + P  VT+  ++ GLC + ++ EA+ L 
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
             M+     P+ +T+ T++   C+   + +A  LL++M    L+PT  TY  ++DG+C  
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKI 232

Query: 532 GDLKNADCLLVSLQE-HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
           GD  +A  LL  ++E  +I    V Y+ II + C +G    A   F +M EKG       
Sbjct: 233 GDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF----- 287

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                          PD      M++ F   G      +L   M++  + PD
Sbjct: 288 ---------------PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 157/569 (27%), Positives = 282/569 (49%), Gaps = 42/569 (7%)

Query: 7   SRTGMVH----DAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSET 59
           SR  ++H    +AV +  +M +     SI  ++ LL     ++  D++    + +++   
Sbjct: 37  SRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGV 96

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             N+YT +I+I+ LC++S+L  A+                   AI+ +  KLG+      
Sbjct: 97  SHNLYTYNIMINCLCRRSQLSFAL-------------------AILGKMMKLGYG----- 132

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
                      P   + N L++G C    + EA+   + M   G +PD +T++ L  G  
Sbjct: 133 -----------PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
             ++ S A  +++++++KG  PD+VTY  +I G C+ G  +  L L   M     + +V+
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            YS ++ S+CK   +D+AL L  EM+  G++PD+ TYS LI  LC   +   A +L ++M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             ++I+PN     +++    ++  + EA   FD +I  +   ++V YN +I+G+     +
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA Q++  ++ K   P +VT+N+LI GFCK  KV D   L   +   GL  + VTYTT 
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ + +  +      + ++M +  + P  +TY  ++ GLCK  KL++A+ + E +    +
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD  TYN +    CK   +   + L   + L  ++P    YN +I G C  G  + A  
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           L + ++E         Y T+I+AH  +GD
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 156/531 (29%), Positives = 270/531 (50%), Gaps = 8/531 (1%)

Query: 61  RNVYTNSIVIDGLCQQ-SR-------LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
           R +Y + +  DG  ++ SR       L +A+    E       PS+V  + ++S   K+ 
Sbjct: 20  RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
             ++       M   G+  + ++YNI+I+ LC    +  AL     M + G  P  +T +
Sbjct: 80  KFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLN 139

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  GF   ++IS A  ++ +++  G  PD VT+T L+ G  Q     E + L E M+ +
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G + +++ Y  +++ +CK G  D AL LL +ME   ++ D+V YS +I  LCK   V  A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           + L+ EM +K I P+ F + +++  LC     ++A      ++      +VV +N +ID 
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           + K G + EA +L+ ++I++ I P+IVT+NSLI GFC + ++ +A+++   +      P 
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            VTY T +N +C+   +   + L ++M  + +    VTYT +I G  +      A  + +
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            M   GV P+ +TYNT++   CK   L KA  +   +    +EP   TYNI+ +G+C  G
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +++   L  SL    +    +AY T+I   C +G   +A T F +M E G
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 170/368 (46%), Gaps = 15/368 (4%)

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           K+ +A+ L+ EM   R  P+      +L  + + +       + + + +     ++  YN
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           IMI+   +   +  A+ +  ++++    PSIVT NSL+ GFC   ++++A  L+D +   
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G +P  VT+TT ++   +       +AL++ M  K   P  VTY  VI GLCK+ +   A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           + LL  M    +  D + Y+T+I S CK + +  A  L  +M    + P   TY+ LI  
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC  G   +A  LL  + E  I+   V + ++I A   EG + +A   F +M+++  + +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344

Query: 588 IRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
           I  Y                +  F +M+S    PD      ++  F +   +    EL  
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404

Query: 633 VMIKSGLL 640
            M + GL+
Sbjct: 405 DMSRRGLV 412



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 3/169 (1%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVI 70
           +A  V  +M    +  +I TYN+LL  L     +     +++ ++ S+   ++YT +I+ 
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +G+C+  +++D        + K   P V++ N ++S +CK G  E A  LF  M + G  
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           PD+ +YN LI      G    + E   +M       DA TY ++    H
Sbjct: 553 PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLH 601


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 161/536 (30%), Positives = 264/536 (49%), Gaps = 25/536 (4%)

Query: 66  NSIVIDGLCQQSRLQ---------DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           +SI    +C + RL+         DAI   QE       PS+V      SR+    F+ +
Sbjct: 37  SSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDF----SRF----FSAI 88

Query: 117 AKGL-------FCLMLKY-GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           A+         FC  L+  G+  + ++ NI+I+  C       A      + + G EPD 
Sbjct: 89  ARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDT 148

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
            T++ L KG  L  ++S A  ++ +++  G  PD+VTY  ++ G C+ G+    L L   
Sbjct: 149 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 208

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M  +  K +V  YS ++ S+C+ G ID A+ L  EME  G+K  +VTY+ L+RGLCK  K
Sbjct: 209 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 268

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
            +    L  +M S+ I PN      +L    ++  + EA   +  +I      +++ YN 
Sbjct: 269 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 328

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           ++DGY     + EA  +   ++  + SP IVTF SLI G+C   +V D  ++   I   G
Sbjct: 329 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 388

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L  +AVTY+  +  +C+ G I+    L QEM +  + P  +TY +++ GLC   KL++A+
Sbjct: 389 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 448

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           ++ ED+    +    + Y TII   CK   +  A+ L   +    ++P   TY ++I GL
Sbjct: 449 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 508

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           C  G L  A+ LL  ++E   +     Y T+I+AH  +GD+  +     +M   GF
Sbjct: 509 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 564



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 156/602 (25%), Positives = 267/602 (44%), Gaps = 62/602 (10%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK- 118
           P  + T S+  D LC        I     +  ++F  S+ + N       + G  ++ K 
Sbjct: 9   PHLLKTGSLRTDLLC-------TISSFFSSCERDFS-SISNGNVCFRERLRSGIVDIKKD 60

Query: 119 ---GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
               LF  M++    P    ++     +         L+F   +  +G+  +  T +I+ 
Sbjct: 61  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 120

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
             F    +   A+ V+ K++  G +PD  T+  LI G    G V E + L + M+  G +
Sbjct: 121 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 180

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +V+ Y+ +++ +C+SG    AL LL +ME   +K D+ TYS +I  LC+   +  AI L
Sbjct: 181 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 240

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           + EM +K I  +                                   VV YN ++ G  K
Sbjct: 241 FKEMETKGIKSS-----------------------------------VVTYNSLVRGLCK 265

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G   +   L + ++ + I P+++TFN L+  F K GK+ +A  L   +   G+ P+ +T
Sbjct: 266 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 325

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y T M+ YC +  +     +L  M      P  VT+T +IKG C   ++ + +++  ++ 
Sbjct: 326 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 385

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G+  + +TY+ +++ FC+   ++ A +L  +M  H + P   TY IL+DGLC NG L+
Sbjct: 386 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 445

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK-- 593
            A  +   LQ+  + L  V YTTII+  C  G V  A   FC +  KG + ++  YT   
Sbjct: 446 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 505

Query: 594 SFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           S  C              M  +G  P+      ++ A  + GDL +  +L   M   G  
Sbjct: 506 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 565

Query: 641 PD 642
            D
Sbjct: 566 AD 567



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 225/452 (49%), Gaps = 3/452 (0%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVID 71
           A  V+ K+ +L  +    T+N+L+  L     + +   L D +  +    +V T + +++
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           G+C+      A+  L++   +     V + + I+   C+ G  + A  LF  M   G+  
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 251

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
              +YN L+ GLC AG   +      DM    + P+ IT+++L   F    ++  A ++ 
Sbjct: 252 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 311

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           ++++ +G  P+I+TY  L+ GYC    + E   + ++M+      +++ ++ L+   C  
Sbjct: 312 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 371

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            R+D+ + +   +   GL  + VTYSIL++G C+  K+  A +L+ EM S  + P+   +
Sbjct: 372 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 431

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
           G +L GLC+   + +A   F+ L  S     +V+Y  +I+G  K G + +A  L+  L  
Sbjct: 432 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 491

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K + P+++T+  +I G CK G +++A  LL  ++  G  P+  TY T + A+  +G++  
Sbjct: 492 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 551

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
              L++EM++        +  +VI  L    K
Sbjct: 552 SAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 583



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 35/47 (74%)

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           A +L++++I++ I+P+ +T++SLI GFCK  ++ +A ++LD +   G
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 253/524 (48%), Gaps = 2/524 (0%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L DA+            PS V    +++   K+        L   M  +G+ PD ++ NI
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI+  C    +  A      + + G +PD  T++ L +G  +  +I  A  +  K + +G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD+VTY  L+ G C++GN    ++L   M+ +  + NVIAY+ ++ S+CK  ++ EA 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L  EM   G+ PD+ TY+ LI  LC   +      L NEM + +I PN      ++  L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++ MI  A    D +I      DVV Y  ++DG+     + EAV+++  ++ K   P++
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            ++N LI G+C+  ++  A  LL+ + L GL    VTY T ++  C  G +Q  +AL  E
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M      P  VTY +++  LCK   L EA+ LL+ +    +  D + YN  I   C+  +
Sbjct: 491 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 550

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L  A  L + +    L+P   TYNI+I GLC  G L  A+ L   + E+  S     Y T
Sbjct: 551 LEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNT 610

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
           II+      +   A     +M+ +GF   +   T +    MLS+
Sbjct: 611 IIRGFLRSNETFGATQLLQEMLAEGFSADVS--TTTLIVEMLSD 652



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 143/502 (28%), Positives = 240/502 (47%), Gaps = 15/502 (2%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  ML     P    +  L+  +         L  +  M   G+ PD  T +IL   F  
Sbjct: 138 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 197

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L ++  A+ V+ KLL  G  PD  T+  LI G C  G + E L L +  + +GF+ +V+ 
Sbjct: 198 LRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVT 257

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y  L++ +CK G    A+ LL  M     +P+++ Y+ +I  LCK  +V +A  L++EM 
Sbjct: 258 YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI 317

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +K ISP+ F + +++  LC            + ++ S  + +VV+++ ++D   K G I 
Sbjct: 318 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIA 377

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A  +   +I++ + P +VT+ +L+ G C   ++ +A ++ DT+   G  P+  +Y   +
Sbjct: 378 IAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILI 437

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YC+   + + + LL++M  + +    VTY  +I GLC   +LQ A+ L  +M   G  
Sbjct: 438 NGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI 497

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +TY  ++   CK   L +A  LL  +   NL+     YNI IDG+C  G+L+ A  L
Sbjct: 498 PDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDL 557

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTK 593
             +L    +      Y  +I   C  G + +A   F +M E G       +   IR + +
Sbjct: 558 FSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLR 617

Query: 594 S--------FFCMMLSNGFPPD 607
           S            ML+ GF  D
Sbjct: 618 SNETFGATQLLQEMLAEGFSAD 639



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/522 (26%), Positives = 246/522 (47%), Gaps = 3/522 (0%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DA+    +M  +    S   +  LL +   ++H   +  L   +     P +VYT +I+I
Sbjct: 133 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 192

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +  C   RL  A   L +       P   + N ++   C  G    A  LF   +  G  
Sbjct: 193 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 252

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD  +Y  L++GLC  G+   A+     M +    P+ I Y+ +        Q++ A+ +
Sbjct: 253 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL 312

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
             +++ KG  PDI TY  LI   C +   +    L   M++     NV+ +S ++ ++CK
Sbjct: 313 FSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 372

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G I  A  ++  M   G++PD+VTY+ L+ G C + ++ +A+++++ M  K   PN  +
Sbjct: 373 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 432

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C+ + + +A    + + +   I D V YN +I G   +G +  A+ L+ +++
Sbjct: 433 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 492

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
                P +VT+  L+   CKN  +A+A  LL  I+   L+   + Y   ++  C  G ++
Sbjct: 493 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 552

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L   + +K + P   TY ++I GLCK+  L EA +L   M   G + D   YNTII
Sbjct: 553 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTII 612

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           R F +  +   A QLL +M         +T  ++++ L  +G
Sbjct: 613 RGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDG 654



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 224/510 (43%), Gaps = 15/510 (2%)

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           ++++AL   N M      P  + ++ L      +   S    +  ++   G  PD+ T  
Sbjct: 130 TLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLN 189

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +LI  +C +  +     +   +L  G + +   ++ L+  +C  G+I EAL L  +    
Sbjct: 190 ILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 249

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G +PD+VTY  L+ GLCK      AI+L   M  K   PN  A+  I+  LC+   +TEA
Sbjct: 250 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 309

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F  +I      D+  YN +I     L        L  +++  +I P++V F++++  
Sbjct: 310 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 369

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G +A A  ++D +   G+EP  VTYT  M+ +C    +   + +   M  K   P 
Sbjct: 370 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 429

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             +Y ++I G C+  ++ +A+ LLE M + G+  D +TYNT+I   C    L+ A  L +
Sbjct: 430 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 489

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M      P   TY IL+D LC N  L  A  LL +++  N+    + Y   I   C  G
Sbjct: 490 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 549

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICE 612
           ++  A   F  +  KG +  +R Y                   F  M  NG   D  I  
Sbjct: 550 ELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYN 609

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            ++  F +  +     +L   M+  G   D
Sbjct: 610 TIIRGFLRSNETFGATQLLQEMLAEGFSAD 639



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 202/396 (51%), Gaps = 3/396 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G    A+ ++  M + + + ++  YN+++ +L   R     ++L+ ++       +++
Sbjct: 267 KVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIF 326

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I  LC     +     L E    +  P+VV  + ++   CK G   +A  +  +M
Sbjct: 327 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 386

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +K G+ PD  +Y  L+ G C+   M+EA++  + M   G  P+  +Y+IL  G+  + ++
Sbjct: 387 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 446

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +++++ ++G   D VTY  LI G C +G ++  + L   M++ G   +++ Y +L
Sbjct: 447 DKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL 506

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L  +CK+  + EA+ LL  +E   L  D++ Y+I I G+C+  ++  A  L++ + SK +
Sbjct: 507 LDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGL 566

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+   +  ++ GLC++ ++ EA   F  +  + C +D  +YN +I G+++      A Q
Sbjct: 567 QPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQ 626

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
           L ++++ +  S  + T   ++     +G      RL
Sbjct: 627 LLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFERL 662


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 160/554 (28%), Positives = 292/554 (52%), Gaps = 19/554 (3%)

Query: 65  TNSIVIDGLCQQSRLQDA-ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           T + +++G C+  RL +A +LF     G +  P++V+ + ++  YCK G  EV +GL  L
Sbjct: 151 TYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSG--EVGEGLGLL 208

Query: 124 --MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + GL  D F Y+ LI   C  G +E   E  ++M R  V P+ +TYS L +G    
Sbjct: 209 EEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRT 268

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A ++++ +  +G  PD+V YTVL  G C+ G   + +K+ ++M+ +G +   + Y
Sbjct: 269 GRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTY 328

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +V+++ +CK  R+D+A G++  M   G KPD VTY+ L++GLC   K+H+A+ L+  + S
Sbjct: 329 NVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLS 388

Query: 302 KR--ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
           ++  + P+ F    ++ GLC++  + +A     S++      ++V YN +I+GY+    +
Sbjct: 389 EKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKL 448

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA++L++  +E   SP+ +T++ +I G CK   ++ AR L   +K  G+ P+ + Y   
Sbjct: 449 IEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNAL 508

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           M + C E ++++  +L QEM         V++ ++I G  K   ++ A +LL +M+++ +
Sbjct: 509 MTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDL 568

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD +T++ +I  F K   L +A  L  +M      P    ++ L+ G  + G+ +    
Sbjct: 569 VPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIIS 628

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEG---DVHKAMTFFCQMVE---KGFEISIRDYTK 593
           LL  + + ++ L     +TI+   C      DV K +  F Q  E   KG  I   +   
Sbjct: 629 LLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQQSEHTSKGTTIKCHEL-- 686

Query: 594 SFFCMMLSNGFPPD 607
               +M  N F P+
Sbjct: 687 ----LMRLNNFHPE 696



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 254/497 (51%), Gaps = 5/497 (1%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY--GLHPDAFSYNILIHGLCIAGSM 149
           + FG +V +LN ++  +C+ G  + A  LF  M +    + PD  +YN L++G C A  +
Sbjct: 106 RGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRL 165

Query: 150 EEALEFTNDMGRHG-VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
            EA      M + G   P+ +TYS+L   +    ++     +++++  +G   D+  Y+ 
Sbjct: 166 AEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSS 225

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI  +C  G++E G +L + ML +    NV+ YS L+  + ++GR  EA  +L +M A G
Sbjct: 226 LISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARG 285

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           ++PD+V Y++L  GLCK  +   AI++ + M  K   P +  +  ++ GLC+++ + +A 
Sbjct: 286 VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAF 345

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR--ISPSIVTFNSLIY 386
              + ++      D V YN ++ G    G I EA+ L++ L+ ++  + P + T N+LI 
Sbjct: 346 GVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQ 405

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G CK G+V DA R+  ++   GL+ + VTY   +  Y     +   L L +        P
Sbjct: 406 GLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSP 465

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             +TY+V+I GLCK   L  A  L   M   G+ P  I YN ++ S C+   L +A  L 
Sbjct: 466 NSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLF 525

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +M   N      ++NI+IDG    GD+K+A  LL  +   ++    V ++ +I      
Sbjct: 526 QEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKL 585

Query: 567 GDVHKAMTFFCQMVEKG 583
           G + +AM  + +MV  G
Sbjct: 586 GMLDEAMGLYEKMVSCG 602



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 150/588 (25%), Positives = 266/588 (45%), Gaps = 58/588 (9%)

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFL-QETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           +P +    S +ID L +++R  DA++ +  +       P   SL+A+   +        A
Sbjct: 38  SPPSEPACSTLIDNL-RKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFA 96

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             +  LM K G   + ++ N+++ G C +G  ++A+   + M R+        Y  +   
Sbjct: 97  FSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRN--------YDCVV-- 146

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG-FKL 236
                                  PD VTY  L+ G+C+   + E   L E M   G  + 
Sbjct: 147 -----------------------PDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRP 183

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N++ YSVL+   CKSG + E LGLL EME  GLK D+  YS LI   C +  +    +L+
Sbjct: 184 NLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELF 243

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           +EM  +++SPN   +  ++ GL       EA      +       DVV Y ++ DG  K 
Sbjct: 244 DEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKN 303

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G  G+A+++   +++K   P  +T+N ++ G CK  ++ DA  +++ +   G +P AVTY
Sbjct: 304 GRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTY 363

Query: 417 TTFMNAYCEEGNIQRLLALLQEM--ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            T +   C  G I   + L + +  E   + P   T   +I+GLCK+ ++ +A ++   M
Sbjct: 364 NTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSM 423

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
             +G+  + +TYN +I  +   + L +A +L          P S TY+++I+GLC    L
Sbjct: 424 VEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQML 483

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
             A  L   +++  I  T + Y  ++ + C E  + +A + F +M      + +  +   
Sbjct: 484 SVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFN-- 541

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                             +++    + GD+ S  EL + M    L+PD
Sbjct: 542 ------------------IIIDGTLKAGDVKSAKELLSEMFMMDLVPD 571



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 179/391 (45%), Gaps = 73/391 (18%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + G   DA+ V+                         D+M      ++  E P    T +
Sbjct: 302 KNGRAGDAIKVL-------------------------DLM------VQKGEEP-GTLTYN 329

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML-- 125
           +V++GLC++ R+ DA   ++    K   P  V+ N ++   C  G    A  L+ L+L  
Sbjct: 330 VVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSE 389

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K+ + PD F+ N LI GLC  G + +A    + M   G++ + +TY+ L +G+    ++ 
Sbjct: 390 KFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLI 449

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYC--QIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
            A K+ +  +  G  P+ +TY+V+I G C  Q+ +V  GL  +  M   G +  VI Y+ 
Sbjct: 450 EALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCK--MKDSGIRPTVIDYNA 507

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++S+C+   +++A  L  EM  V    D+V+++I+I G  K   V  A +L +EM    
Sbjct: 508 LMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEM---- 563

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
                                           M + + D V ++I+I+ + KLG + EA+
Sbjct: 564 -------------------------------FMMDLVPDAVTFSILINRFSKLGMLDEAM 592

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
            LY +++     P +V F+SL+ G+   G+ 
Sbjct: 593 GLYEKMVSCGHVPGVVVFDSLLKGYGLKGET 623



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 122/284 (42%), Gaps = 24/284 (8%)

Query: 368 QLIEKR-ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH--GLEPSAVTYTTFMNAYC 424
            L+ KR    ++   N ++ GFC++G+   A  L   +K +   + P  VTY T +N +C
Sbjct: 101 SLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFC 160

Query: 425 EEGNIQRLLALLQEMETKA-IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           +   +     L + M+      P  VTY+V+I   CK  ++ E + LLE+M   G+  D 
Sbjct: 161 KAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADV 220

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
             Y+++I +FC   D+    +L ++M    + P   TY+ L+ GL   G  + A  +L  
Sbjct: 221 FVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKD 280

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           +    +    VAYT +    C  G    A+     MV+KG E     Y       ++ NG
Sbjct: 281 MTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYN------VVVNG 334

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              +                +   F +  +M+K G  PD    N
Sbjct: 335 LCKEDR--------------MDDAFGVVEMMVKKGKKPDAVTYN 364


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 177/612 (28%), Positives = 297/612 (48%), Gaps = 27/612 (4%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDL-------YDD 53
           + A+V S+   +   +F   KMK L  + ++ T N+LL  L  ++    L        D 
Sbjct: 145 LAAYVISKQPHLGHQIF--NKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDA 202

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKL 111
           +K+   P NV T +I+I G C  +  ++A+  + +    E+G  P  V+ N +++  CK 
Sbjct: 203 VKLGVQP-NVNTFNILIHGYCSDNNTEEALRLINQMG--EYGCCPDNVTYNTVLTALCKR 259

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
                 + L   M   GL P+  +YNIL+HG C    ++EA E    M   G+ PD  TY
Sbjct: 260 SQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTY 319

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + + +G     +I  A ++  K+      PD+VTY  LI G  +    +   KL E M +
Sbjct: 320 NTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKA 379

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +G K N + +++++   C  G+IDEA  ++ +M   G  PD  TY+ +I G CK  K+ +
Sbjct: 380 RGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAE 439

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A ++ +EM  K +  ++F    +L  +C ++ + +A            I D V Y  +I 
Sbjct: 440 AYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIM 499

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           GY K      A++L+ ++ E  I  +I+T+N++I G C +GK   A   L+ +   GL P
Sbjct: 500 GYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVP 559

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
              T    ++ YC EG +++      +M   ++ P   T  ++++GLC++  L++ + L 
Sbjct: 560 DESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLF 619

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
                 G   D +TYN II SFCK + L  AF L+ +M   NLEP   TYN ++ GL   
Sbjct: 620 NTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKA 679

Query: 532 GDLKNADCLLVSLQEH-----------NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           G  + A+ L +   E             +  + + Y+  I + C +G    AM  F Q  
Sbjct: 680 GRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAE 739

Query: 581 EKGFEISIRDYT 592
           +KG  +S+  YT
Sbjct: 740 QKG--VSLNKYT 749



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 245/512 (47%), Gaps = 12/512 (2%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P NV  N+ V+  LC++S+L      L +       P+  + N ++  YCKL + + A  
Sbjct: 244 PDNVTYNT-VLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAE 302

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +  LM   G+ PD ++YN ++ GLC  G ++EA+   + M    + PD +TY+ L  G  
Sbjct: 303 VIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCF 362

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
                  A+K+++++  +G   + VT+ ++I  +C  G ++E   +   M+  GF  +  
Sbjct: 363 EHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCF 422

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ +++  CK+G++ EA  ++ EM   GLK D  T + L+  +C + ++  A  L  + 
Sbjct: 423 TYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKA 482

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             +    +   +G +++G  + E    A   ++ +  +  +  ++ YN +I G    G  
Sbjct: 483 RKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKT 542

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +AV    +L+EK + P   T N +I+G+C  G V  A +  + +  H L+P   T    
Sbjct: 543 DQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNIL 602

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +   C EG +++ L L     +K      VTY ++I   CK+ +L++A  L+ +M    +
Sbjct: 603 LRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNL 662

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLL-------NQMWLHNLEPTSATYNIL----IDGL 528
            PD+ TYN I+    K     +A +L         Q+   +  P   T +++    I  L
Sbjct: 663 EPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSL 722

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           C  G  K+A  L    ++  +SL K  Y  ++
Sbjct: 723 CTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLM 754



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 247/537 (45%), Gaps = 14/537 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRN 62
           Y       +A+ +I +M E        TYN++L  L + + +  + DL   +K S    N
Sbjct: 221 YCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPN 280

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T +I++ G C+   L++A   ++   GK   P V + N ++   C  G  + A  L  
Sbjct: 281 RNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRD 340

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M  + L PD  +YN LI G       + A +   +M   GV+ + +T++I+ K F    
Sbjct: 341 KMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEG 400

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +I  A  V+ K++  G  PD  TY  +I GYC+ G + E  K+ + M  +G KL+    +
Sbjct: 401 KIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLN 460

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            LL +MC   ++D+A  L  +    G   D VTY  LI G  K ++  +A++L+ EM   
Sbjct: 461 TLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKET 520

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I      +  I+ GLC      +A    + L+    + D    NI+I GY   G + +A
Sbjct: 521 GIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKA 580

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            Q + +++E  + P I T N L+ G C+ G +     L +T    G     VTY   +++
Sbjct: 581 FQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISS 640

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL-------EDMY 475
           +C+E  ++    L+ EME K + P   TY  ++ GL K  + +EA +L        + + 
Sbjct: 641 FCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVK 700

Query: 476 VIGVTPD----QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
               +P+     + Y+  I S C     + A +L  Q     +     TY  L+DGL
Sbjct: 701 TQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGL 757



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 235/509 (46%), Gaps = 18/509 (3%)

Query: 157 NDMGRHGVEPDAITYSILAKGF---HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           N M R    P+ +T + L       +    +  + +V Q  +  G  P++ T+ +LI GY
Sbjct: 162 NKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGY 221

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C   N EE L+L   M   G   + + Y+ +L+++CK  ++ +   LL +M+  GL P+ 
Sbjct: 222 CSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNR 281

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            TY+IL+ G CK   + +A ++   M  K + P+ + +  ++ GLC++  I EA    D 
Sbjct: 282 NTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDK 341

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +     + DVV YN +IDG  +      A +L  ++  + +  + VT N +I  FC  GK
Sbjct: 342 MESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGK 401

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + +A  ++  +   G  P   TY T +N YC+ G +     ++ EM  K +     T   
Sbjct: 402 IDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNT 461

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           ++  +C + +L +A  L       G   D++TY T+I  + K +   +A +L  +M    
Sbjct: 462 LLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETG 521

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           +  T  TYN +I GLC++G    A   L  L E  +   +     II  +C EG V KA 
Sbjct: 522 IVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAF 581

Query: 574 TFFCQMVEKGFE-------ISIRDYTK--------SFFCMMLSNGFPPDQEICEVMLIAF 618
            F  +MVE   +       I +R   +        + F   +S G P D     +++ +F
Sbjct: 582 QFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSF 641

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            +   L   F+L   M    L PD++  N
Sbjct: 642 CKERRLEDAFDLMTEMEGKNLEPDRYTYN 670



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 218/503 (43%), Gaps = 60/503 (11%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +L   Y +   + +A  VI  M    +   + TYN+++  L      D    L D ++  
Sbjct: 286 ILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESF 345

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFL-QETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           +   +V T + +IDG C + R  DA   L +E   +    + V+ N ++  +C  G  + 
Sbjct: 346 KLVPDVVTYNTLIDG-CFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDE 404

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  +   M++ G  PD F+YN +I+G C AG M EA +  ++MGR G++ D  T + L  
Sbjct: 405 ASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLH 464

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
              L  Q+  A+ +  K   +G   D VTY  LI GY +    +  LKL E M   G   
Sbjct: 465 TMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVA 524

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +I Y+ ++  +C SG+ D+A+  L E+   GL PD  T +I+I G C +  V KA Q +
Sbjct: 525 TIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFH 584

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           N+M    + P+ F    +L GLC + M+ +    F++ I      D V YNI+I  + K 
Sbjct: 585 NKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKE 644

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF---------------------------- 388
             + +A  L  ++  K + P   T+N+++ G                             
Sbjct: 645 RRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDT 704

Query: 389 ------------------CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
                             C  GK  DA +L    +  G+  +  TY   M+         
Sbjct: 705 SPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDG-------- 756

Query: 431 RLLALLQEMETKAIGPTHVTYTV 453
            LL   +   T ++ P  V+ T+
Sbjct: 757 -LLKRRKSFTTTSLLPFMVSATI 778



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 140/317 (44%), Gaps = 19/317 (5%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DA  +  K ++    +   TY +L+   +     D    L++++K +     + T + +I
Sbjct: 474 DAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTII 533

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
            GLC   +   A+  L E   K   P   + N I+  YC  G  E A      M+++ L 
Sbjct: 534 RGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLK 593

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD F+ NIL+ GLC  G +E+ L   N     G   D +TY+I+   F    ++  A+ +
Sbjct: 594 PDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDL 653

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV-----------I 239
           + ++  K  +PD  TY  ++ G  + G  EE  KL      +G ++             +
Sbjct: 654 MTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDM 713

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            YS  +SS+C  G+  +A+ L  + E  G+  +  TY  L+ GL K+ K      L   M
Sbjct: 714 MYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFM 773

Query: 300 CSKRI-----SPNSFAH 311
            S  I     +P  +AH
Sbjct: 774 VSATIQFFDRNPMRYAH 790


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 259/491 (52%), Gaps = 1/491 (0%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           N +++   + G  +  K ++  ML+  + P+ ++YN +++G C  G++EEA ++ + +  
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVE 246

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            G++PD  TY+ L  G+     +  A+KV +++ +KG   + V YT LI G C    ++E
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDE 306

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            + L   M        V  Y+VL+ ++C S R  EAL L+ EME  G+KP++ TY++LI 
Sbjct: 307 AMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLID 366

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
            LC Q K+ KA +L  +M  K + PN   + A++ G C++ MI +A    + +   N   
Sbjct: 367 SLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRP 426

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           +   YN +I GY K  N+ +A+ +  +++E+++ P +VT+NSLI G C++G    A RLL
Sbjct: 427 NTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +   GL P   TYT+ +++ C+   ++    L   +E K + P  V YT +I G CK 
Sbjct: 486 SLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKA 545

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            K+ EA  +LE M      P+ +T+N +I   C    L++A  L  +M   +L+PT +T 
Sbjct: 546 GKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTD 605

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
            ILI  L  +GD  +A      +           YTT I+ +C EG +  A     +M E
Sbjct: 606 TILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKE 665

Query: 582 KGFEISIRDYT 592
            G    +  Y+
Sbjct: 666 NGVSPDLFTYS 676



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 175/635 (27%), Positives = 306/635 (48%), Gaps = 65/635 (10%)

Query: 12  VHDAVFVI---AKMK-----ELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETP 60
           V D +FV+    KM      EL  K+ I  YN+LL +L      D M  +Y ++   +  
Sbjct: 156 VADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVC 215

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N+YT + +++G C+   +++A  ++         P   +  +++  YC+    + A  +
Sbjct: 216 PNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M   G   +  +Y  LIHGLC+   ++EA++    M      P   TY++L K    
Sbjct: 276 FKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCG 335

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             + S A  +++++  KG  P+I TYTVLI   C    +E+  +L   ML +G   NVI 
Sbjct: 336 SERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVIT 395

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L++  CK G I++AL ++  ME+  L+P+  TY+ LI+G CK++ VHKA+ + N+M 
Sbjct: 396 YNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKML 454

Query: 301 SKRISPNSFAHGAILLG-----------------------------------LCEKEMIT 325
            +++ P+   + +++ G                                   LC+ + + 
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVE 514

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA   FDSL   + I +VV+Y  +IDGY K G + EA  +  +++ K   P+ +TFN+LI
Sbjct: 515 EACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALI 574

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
           +G C +GK+ +A  L + +    L+P+  T T  ++   ++G+        Q+M +    
Sbjct: 575 HGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTK 634

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P   TYT  I+  C++ +LQ+A  ++  M   GV+PD  TY+++I+ +        AF +
Sbjct: 635 PDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVV 694

Query: 506 LNQMWLHNLEPTSATYNILID---------------GLCVNGDLKNADC---LLVSLQEH 547
           L +M     EP+  T+  LI                G+CV  ++   D    LL  + EH
Sbjct: 695 LKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEH 754

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            ++    +Y  ++   C  G++  A   F  M +K
Sbjct: 755 GVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQK 789



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 248/509 (48%), Gaps = 21/509 (4%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           YN L++ L   G ++E  +   +M    V P+  TY+ +  G+  +  +  A + +  ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
             G DPD  TYT LI GYCQ  +++   K+ + M  +G + N +AY+ L+  +C   RID
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           EA+ L  +M+     P + TY++LI+ LC  ++  +A+ L  EM  K I PN   +  ++
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
             LC +  + +AR     ++    + +V+ YN +I+GY K G I +A+ +   +  + + 
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLR 425

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+  T+N LI G+CK   V  A  +L+ +    + P  VTY + ++  C  GN      L
Sbjct: 426 PNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           L  M  + + P   TYT +I  LCK  +++EA  L + +    V P+ + Y  +I  +CK
Sbjct: 485 LSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCK 544

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              + +A  +L +M   N  P S T+N LI GLC +G LK A  L   + + ++  T   
Sbjct: 545 AGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVST 604

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
            T +I     +GD   A   F Q                    MLS+G  PD       +
Sbjct: 605 DTILIHRLLKDGDFDHAYRRFQQ--------------------MLSSGTKPDAHTYTTFI 644

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
             + + G L    ++ A M ++G+ PD F
Sbjct: 645 QTYCREGRLQDAEDMVAKMKENGVSPDLF 673



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 167/654 (25%), Positives = 291/654 (44%), Gaps = 70/654 (10%)

Query: 14  DAVFVIAKMKELDLKVSIQT---YNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNS 67
           D+ F +   KE+ LK   +    Y  L++ L   R  D   DL+  +K  +    V T +
Sbjct: 270 DSAFKV--FKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYT 327

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++I  LC   R  +A+  ++E   K   P++ +   ++   C     E A+ L   ML+ 
Sbjct: 328 VLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEK 387

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           GL P+  +YN LI+G C  G +E+AL+    M    + P+  TY+ L KG+     +  A
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGY-CKRNVHKA 446

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             V+ K+L +   PD+VTY  LI G C+ GN +   +L  +M  +G   +   Y+ ++ S
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDS 506

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CKS R++EA  L   +E   + P++V Y+ LI G CK  KV++A  +  +M SK   PN
Sbjct: 507 LCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPN 566

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           S    A++ GLC    + EA +  + ++  +    V    I+I   +K G+   A + ++
Sbjct: 567 SLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQ 626

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           Q++     P   T+ + I  +C+ G++ DA  ++  +K +G+ P   TY++ +  Y + G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLG 686

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIK---------------GLCKQWKLQE---AVQ 469
                  +L+ M      P+  T+  +IK               G+C    + E    V+
Sbjct: 687 RTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVE 746

Query: 470 LLEDMYVIGVTPD------------------------------------QITYNTIIRSF 493
           LLE M   GVTP+                                    ++ +N ++   
Sbjct: 747 LLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCC 806

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           CK +   +A ++++ M      P   +  ILI  L   G+ +    +  +L +      +
Sbjct: 807 CKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDE 866

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
           +A+  II     +G V      F  M + G   S + Y+      +L  G PPD
Sbjct: 867 LAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYS------LLIEG-PPD 913



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 210/402 (52%), Gaps = 10/402 (2%)

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           I+ L+IK  D   V  T+ +   C+  N +E  +L+       +KL +  Y+ LL+S+ +
Sbjct: 145 IRLLMIKSCDS--VADTLFVLDLCRKMNKDESFELK-------YKLIIGCYNTLLNSLAR 195

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G +DE   +  EM    + P++ TY+ ++ G CK   V +A Q  + +    + P+ F 
Sbjct: 196 FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFT 255

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + ++++G C+++ +  A   F  + +  C ++ V Y  +I G      I EA+ L+ ++ 
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMK 315

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           +    P++ T+  LI   C + + ++A  L+  ++  G++P+  TYT  +++ C +  ++
Sbjct: 316 DDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLE 375

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           +   LL +M  K + P  +TY  +I G CK+  +++A+ ++E M    + P+  TYN +I
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELI 435

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
           + +CK +++ KA  +LN+M    + P   TYN LIDG C +G+  +A  LL  + +  + 
Sbjct: 436 KGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
                YT++I + C    V +A   F  + +K    ++  YT
Sbjct: 495 PDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYT 536



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 96/437 (21%), Positives = 177/437 (40%), Gaps = 92/437 (21%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R+G    A  +++ M +  L     TY S++ +L   +  +   DL+D ++  +   NV 
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVV 533

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC--------------- 109
             + +IDG C+  ++ +A L L++   K   P+ ++ NA++   C               
Sbjct: 534 MYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKM 593

Query: 110 --------------------KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                               K G  + A   F  ML  G  PDA +Y   I   C  G +
Sbjct: 594 VKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL--------------- 194
           ++A +    M  +GV PD  TYS L KG+  L + + A+ V++++               
Sbjct: 654 QDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSL 713

Query: 195 ----------LIKGSDP-----------DIV-----------------TYTVLICGYCQI 216
                      +KG +P           DIV                 +Y  L+ G C+I
Sbjct: 714 IKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEI 773

Query: 217 GNVEEGLKLREVML-SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           GN+    K+ + M   +G   + + ++ LLS  CK  + +EA  ++ +M  VG  P L +
Sbjct: 774 GNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLES 833

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
             ILI  L K+ +  +   ++  +       +  A   I+ G+ ++ ++      F+ + 
Sbjct: 834 CKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVME 893

Query: 336 MSNCIQDVVLYNIMIDG 352
            + C      Y+++I+G
Sbjct: 894 KNGCTFSSQTYSLLIEG 910


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 153/500 (30%), Positives = 261/500 (52%), Gaps = 2/500 (0%)

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           QE +    G +V +LN +++  CK G  E        + + G++PD  +YN LI      
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G MEEA E  N M   G  P   TY+ +  G     +   A +V  ++L  G  PD  TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             L+   C+ G+V E  K+   M S+    +++ +S ++S   +SG +D+AL     ++ 
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            GL PD V Y+ILI+G C++  +  A+ L NEM  +  + +   +  IL GLC+++M+ E
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A   F+ +       D     I+IDG+ KLGN+  A++L++++ EKRI   +VT+N+L+ 
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           GF K G +  A+ +   +    + P+ ++Y+  +NA C +G++     +  EM +K I P
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
           T +    +IKG C+     +    LE M   G  PD I+YNT+I  F + +++ KAF L+
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643

Query: 507 NQMWLHN--LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
            +M      L P   TYN ++ G C    +K A+ +L  + E  ++  +  YT +I    
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703

Query: 565 AEGDVHKAMTFFCQMVEKGF 584
           ++ ++ +A     +M+++GF
Sbjct: 704 SQDNLTEAFRIHDEMLQRGF 723



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 155/556 (27%), Positives = 263/556 (47%), Gaps = 40/556 (7%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVS 57
           +L   Y +   + +A      ++     VSI   N+L+ +L      ++ W +Y +I  S
Sbjct: 170 LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NVYT +I+++ LC+  +++    FL +   K   P +V+ N ++S Y   G  E A
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL--- 174
             L   M   G  P  ++YN +I+GLC  G  E A E   +M R G+ PD+ TY  L   
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349

Query: 175 --AKG------------------------------FHLLSQISGAWKVIQKLLIKGSDPD 202
              KG                              F     +  A      +   G  PD
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
            V YT+LI GYC+ G +   + LR  ML QG  ++V+ Y+ +L  +CK   + EA  L  
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           EM    L PD  T +ILI G CK   +  A++L+ +M  KRI  +   +  +L G  +  
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            I  A+  +  ++    +   + Y+I+++     G++ EA +++ ++I K I P+++  N
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           S+I G+C++G  +D    L+ +   G  P  ++Y T +  +  E N+ +   L+++ME +
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE 649

Query: 443 AIG--PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
             G  P   TY  ++ G C+Q +++EA  +L  M   GV PD+ TY  +I  F    +L 
Sbjct: 650 QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLT 709

Query: 501 KAFQLLNQMWLHNLEP 516
           +AF++ ++M      P
Sbjct: 710 EAFRIHDEMLQRGFSP 725



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 151/592 (25%), Positives = 276/592 (46%), Gaps = 52/592 (8%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++I    Q  +L++A         K F  S+ + NA++    ++G+ E+A G++  + + 
Sbjct: 170 LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+  + ++ NI+++ LC  G ME+   F                         LSQ+   
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTF-------------------------LSQVQE- 263

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
                    KG  PDIVTY  LI  Y   G +EE  +L   M  +GF   V  Y+ +++ 
Sbjct: 264 ---------KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 314

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK G+ + A  +  EM   GL PD  TY  L+   CK+  V +  +++++M S+ + P+
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
                +++        + +A MYF+S+  +  I D V+Y I+I GY + G I  A+ L  
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           +++++  +  +VT+N++++G CK   + +A +L + +    L P + T T  ++ +C+ G
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           N+Q  + L Q+M+ K I    VTY  ++ G  K   +  A ++  DM    + P  I+Y+
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++ + C    L +AF++ ++M   N++PT    N +I G C +G+  + +  L  +   
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK--GFEISIRDYTKSF--FCM----- 598
                 ++Y T+I     E ++ KA     +M E+  G    +  Y      FC      
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674

Query: 599 --------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                   M+  G  PD+     M+  F    +L   F +   M++ G  PD
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 219/460 (47%), Gaps = 17/460 (3%)

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           GS+  +  + +LI  Y Q   + E  +   ++ S+GF +++ A + L+ S+ + G ++ A
Sbjct: 162 GSNDSV--FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
            G+  E+   G+  ++ T +I++  LCK  K+ K     +++  K + P+   +  ++  
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
              K ++ EA    +++        V  YN +I+G  K G    A +++ +++   +SP 
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
             T+ SL+   CK G V +  ++   ++   + P  V +++ M+ +   GN+ + L    
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            ++   + P +V YT++I+G C++  +  A+ L  +M   G   D +TYNTI+   CK K
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            L +A +L N+M    L P S T  ILIDG C  G+L+NA  L   ++E  I L  V Y 
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------------KSF--FCMMLSN 602
           T++      GD+  A   +  MV K    +   Y+             ++F  +  M+S 
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              P   IC  M+  + + G+          MI  G +PD
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 20/265 (7%)

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           F+ LI  + +  K+ +A      ++  G   S       + +    G ++    + QE+ 
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
              +G    T  +++  LCK  K+++    L  +   GV PD +TYNT+I ++     + 
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +AF+L+N M      P   TYN +I+GLC +G  + A  +   +    +S     Y +++
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
              C +GDV          VE          T+  F  M S    PD      M+  F +
Sbjct: 348 MEACKKGDV----------VE----------TEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387

Query: 621 GGDLGSVFELAAVMIKSGLLPDKFL 645
            G+L         + ++GL+PD  +
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVI 412



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 40/237 (16%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           + + G + +A+ +  KMKE  +++ + TYN+LL         D   +++ D+   E    
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE------- 115
             + SI+++ LC +  L +A     E   K   P+V+  N+++  YC+ G A        
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609

Query: 116 --VAKGLFCLMLKY----------------------------GLHPDAFSYNILIHGLCI 145
             +++G     + Y                            GL PD F+YN ++HG C 
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
              M+EA      M   GV PD  TY+ +  GF     ++ A+++  ++L +G  PD
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 185/664 (27%), Positives = 314/664 (47%), Gaps = 21/664 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYN----SLLYNLRHTDIMWDLYDDIKV 56
           +L  VY R GMV  AV   + M     K S+ T N    S++ N R   ++W  +  +  
Sbjct: 110 LLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCR-AHLVWSFFKQMLT 168

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           S    NV + +I+I  LC Q +L+ A+  L       + P++VS N ++S  CK G  + 
Sbjct: 169 SRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKF 228

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  L   M   G+  D  +YN+ I  LC      +       M    + P+ ++Y+ L  
Sbjct: 229 ALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLIN 288

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           GF    +I  A +V  +++     P+++TY +LI GYC  GN EE L++ +VM +   + 
Sbjct: 289 GFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRP 348

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N +    LL+ + KS + D A  +L          + ++++++I GLC+   + +A QL 
Sbjct: 349 NEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLL 408

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EMC   + P+      ++ G C+   I +A+     +     + + V+++ +I    K+
Sbjct: 409 IEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKV 468

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           GN+ EA++ Y  +     +    T NSL+   C+NGK+ +A   L  I   GL P++VT+
Sbjct: 469 GNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTF 528

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              +N Y   G+     ++   M +    P+  TY  ++K LCK     EA +LL+ ++ 
Sbjct: 529 DCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHC 588

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
           I +  D I+YNT+I    K  +L +A +L  +M  +N+ P S TY  ++ GL   G L  
Sbjct: 589 IPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVC 648

Query: 537 ADCLLVSLQEHNI-SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI------SIR 589
           A   L  L +  I +L  + YT  I      G    A+  F +M EKG  +      SI 
Sbjct: 649 AFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSIT 708

Query: 590 D-YTK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           D Y++        S      +    P+     ++L  + +G D+ S F+L  +M +SG  
Sbjct: 709 DGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFF 768

Query: 641 PDKF 644
           P++ 
Sbjct: 769 PNRL 772



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 156/608 (25%), Positives = 292/608 (48%), Gaps = 23/608 (3%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           I+++ +P N+ T +I+I+G C     ++A+  L      +  P+ V++  +++   K   
Sbjct: 307 IELNLSP-NLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAK 365

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            +VA+ +           +  S+ ++I GLC  G ++EA +   +M + GV PD IT+S+
Sbjct: 366 FDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSV 425

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L  GF  +  I+ A +V+ K+  +G  P+ V ++ LI   C++GNV E +K    M   G
Sbjct: 426 LINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNG 485

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              +    + L++S+C++G++ EA   L+ +  +GL P+ VT+  +I G         A 
Sbjct: 486 QNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAF 545

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ---DVVLYNIMI 350
            +++ M S    P+ F +G++L  LC+ +   EAR     L   +CI    D + YN +I
Sbjct: 546 SVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKL---HCIPLAVDTISYNTLI 602

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI-KLHGL 409
               K GN+ EAV+L+ ++I+  I P   T+  ++ G  + G++  A   L  + +   L
Sbjct: 603 VEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEIL 662

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
             +++ YT F++   + G  +  L L +EME K +    +    +  G  +  K+  A  
Sbjct: 663 TLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASS 722

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           L+       V P+  T+N ++  + + +D+   F+L N M      P   TY+ LI GLC
Sbjct: 723 LISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLC 782

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA------MTFFCQMVEKG 583
            +G L+    +L      + ++  + +  +I+  C   D+ K       M  F   ++K 
Sbjct: 783 NHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKD 842

Query: 584 FEISIRDY------TKSFFCMM---LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
            + ++ D       ++++F  M   L  GF P  +    M+    + GD+   F+L   M
Sbjct: 843 TQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQM 902

Query: 635 IKSGLLPD 642
           +  G+  D
Sbjct: 903 VALGISLD 910



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/528 (23%), Positives = 246/528 (46%), Gaps = 23/528 (4%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           +++LI      G +  A+   + M   G +P   T +++        +    W   +++L
Sbjct: 108 FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQML 167

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
                P++ ++ +LI   C  G +++ + +  +M   G+   +++Y+ LLS  CK GR  
Sbjct: 168 TSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFK 227

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
            AL L++ ME  G++ D+ TY++ I  LC+  +  +   +  +M +K I+PN  ++  ++
Sbjct: 228 FALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            G  ++  I  A   F+ +I  N   +++ YNI+I+GY   GN  EA+++   +    + 
Sbjct: 288 NGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVR 347

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+ VT  +L+ G  K+ K   AR +L+   ++    + +++T  ++  C  G +     L
Sbjct: 348 PNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQL 407

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           L EM    + P  +T++V+I G CK   + +A +++  +Y  G  P+ + ++T+I + CK
Sbjct: 408 LIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCK 467

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
             ++ +A +    M L+     + T N L+  LC NG L  A+  L  +    +    V 
Sbjct: 468 VGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVT 527

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS-------------------IRDYTKSFF 596
           +  II  +   GD   A + F +M+  G   S                    R   K   
Sbjct: 528 FDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLH 587

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           C+ L+     D      +++   + G+L     L   MI++ +LPD +
Sbjct: 588 CIPLA----VDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSY 631



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 154/695 (22%), Positives = 298/695 (42%), Gaps = 109/695 (15%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLK---VSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRN 62
            Y   G   +A+ V+  M+  D++   V+I T  + LY     D+  ++ +   ++ T  N
Sbjct: 325  YCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLN 384

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
              +++++IDGLC+   L +A   L E       P +++ + +++ +CK+G    AK +  
Sbjct: 385  CISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMS 444

Query: 123  LMLKYGLHP-----------------------------------DAFSYNILIHGLCIAG 147
             + + G  P                                   D F+ N L+  LC  G
Sbjct: 445  KIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENG 504

Query: 148  SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
             + EA EF + + R G+ P+++T+  +  G+  +   SGA+ V  +++  G  P   TY 
Sbjct: 505  KLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYG 564

Query: 208  VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
             L+   C+  N  E  KL + +      ++ I+Y+ L+  + KSG + EA+ L  EM   
Sbjct: 565  SLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQN 624

Query: 268  GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI-SPNSFAHGAILLGLCEKEMITE 326
             + PD  TY+ ++ GL ++ ++  A      +  K I + NS  +   + GL +      
Sbjct: 625  NILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKA 684

Query: 327  ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
            A   F  +       D++  N + DGY ++G +  A  L  +   K + P++ TFN L++
Sbjct: 685  ALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLH 744

Query: 387  GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
            G+ +   +    +L + ++  G  P+ +TY + +   C  G ++  + +L+    ++   
Sbjct: 745  GYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTI 804

Query: 447  THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT--------------------- 485
              +T+ ++I+  C+   L + + L  +M V  V+ D+ T                     
Sbjct: 805  DDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFM 864

Query: 486  --------------YNTIIRSFCKCKDLRKAFQLLNQ----------------------- 508
                          Y T+++  C+  D++ AF+L +Q                       
Sbjct: 865  HEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALC 924

Query: 509  ------MWLHNLE------PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
                  MW+          PT++T+  L+   C   + K A  L + ++ + + L  VAY
Sbjct: 925  GKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAY 984

Query: 557  TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
              +I A CA GDV  A+ F+ ++ +KG   ++  Y
Sbjct: 985  NVLISACCANGDVITALDFYEEIKQKGLLPNMTTY 1019



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 110/504 (21%), Positives = 226/504 (44%), Gaps = 16/504 (3%)

Query: 14   DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVI 70
            +A  ++ K+  + L V   +YN+L+  +  +  + +   L++++  +    + YT + ++
Sbjct: 578  EARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCIL 637

Query: 71   DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI-----MSRYCKLGFAEVAKGLFCLML 125
             GL ++ RL  A +FL     KE    +++LN+I     +    K G ++ A  LF  M 
Sbjct: 638  SGLIREGRLVCAFIFLGRLMQKE----ILTLNSIVYTCFIDGLFKAGQSKAALYLFKEME 693

Query: 126  KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
            + GL  D  + N +  G    G +  A    +      V P+  T++IL  G+     I 
Sbjct: 694  EKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIM 753

Query: 186  GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
              +K+   +   G  P+ +TY  LI G C  G +E G+K+ ++ +++   ++ + +++L+
Sbjct: 754  SCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLI 813

Query: 246  SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
               C+   +D+ + L + ME   +  D  T   +   L ++          +EM  K   
Sbjct: 814  RKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFI 873

Query: 306  PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
            P S  +  ++  +C    I  A    D ++      D      M+ G    G I EA+ +
Sbjct: 874  PTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWI 933

Query: 366  YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++++  +  P+  TF +L++ FCK     +A  L   ++ + ++   V Y   ++A C 
Sbjct: 934  LQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCA 993

Query: 426  EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
             G++   L   +E++ K + P   TY V++  +  +  +     +L+D+   G+    + 
Sbjct: 994  NGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLD 1053

Query: 486  YNTIIRSFCKCKDLRKAFQLLNQM 509
                 +S   C+D   A + LN +
Sbjct: 1054 G----KSQKSCRDFVVAIKKLNSL 1073



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 97/207 (46%)

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
           S +   F+ LI  + + G V  A     ++ + G +PS  T    M +  +      + +
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWS 161

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
             ++M T  + P   ++ ++I  LC Q KL++AV +L  M   G  P  ++YNT++   C
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K    + A  L++ M    ++    TYN+ ID LC N        +L  ++   I+  +V
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           +Y T+I     EG +  A   F +M+E
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIE 308


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 150/525 (28%), Positives = 276/525 (52%), Gaps = 3/525 (0%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           + DAV +   M +     SI  ++ LL     +   D++  L + ++      N+YT SI
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+  C++S+L  A+  L +     + P +V+LN++++ +C       A  L   M++ G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD+F++N LIHGL       EA+   + M   G +PD +TY I+  G      I  A 
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            +++K+     +P +V Y  +I   C   NV + L L   M ++G + NV+ Y+ L+  +
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C  GR  +A  LL +M    + P++VT+S LI    K+ K+ +A +LY+EM  + I P+ 
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F + +++ G C  + + EA+  F+ +I  +C  +VV YN +I G+ K   + E ++L+R+
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + ++ +  + VT+ +LI+GF +  +  +A+ +   +   G+ P  +TY+  ++  C  G 
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           ++  L + + ++   + P   TY ++I+G+CK  K+++   L   + + GV P+ +TY T
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           ++  FC+     +A  L  +M      P S TYN LI     +GD
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 138/541 (25%), Positives = 273/541 (50%), Gaps = 5/541 (0%)

Query: 28  KVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           K+SI   N L       D   +L+ D+  S    ++   S ++  + + ++    I   +
Sbjct: 51  KISINRLNDL-----KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGE 105

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           +        ++ + + +++ +C+     +A  +   M+K G  PD  + N L++G C   
Sbjct: 106 QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGN 165

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            + +A+     M   G +PD+ T++ L  G    ++ S A  ++ ++++KG  PD+VTY 
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +++ G C+ G+++  L L + M     +  V+ Y+ ++ ++C    +++AL L  EM+  
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G++P++VTY+ LIR LC   +   A +L ++M  ++I+PN     A++    ++  + EA
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              +D +I  +   D+  Y+ +I+G+     + EA  ++  +I K   P++VT+N+LI G
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           FCK  +V +   L   +   GL  + VTYTT ++ + +         + ++M +  + P 
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            +TY++++ GLC   K++ A+ + E +    + PD  TYN +I   CK   +   + L  
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            + L  ++P   TY  ++ G C  G  + AD L   ++E         Y T+I+AH  +G
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585

Query: 568 D 568
           D
Sbjct: 586 D 586



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 259/506 (51%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +L DA+    +       PS+V  + ++S   K+   ++   L   M   G+  + ++Y+
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           ILI+  C    +  AL     M + G EPD +T + L  GF   ++IS A  ++ +++  
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  PD  T+  LI G  +     E + L + M+ +G + +++ Y ++++ +CK G ID A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L LL +ME   ++P +V Y+ +I  LC    V+ A+ L+ EM +K I PN   + +++  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC     ++A      +I      +VV ++ +ID +VK G + EA +LY ++I++ I P 
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           I T++SLI GFC + ++ +A+ + + +      P+ VTY T +  +C+   +   + L +
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM  + +    VTYT +I G  +  +   A  + + M   GV PD +TY+ ++   C   
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            +  A  +   +    +EP   TYNI+I+G+C  G +++   L  SL    +    V YT
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG 583
           T++   C +G   +A   F +M E+G
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEG 566



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/533 (28%), Positives = 252/533 (47%), Gaps = 15/533 (2%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  M+K    P    ++ L+  +      +  +     M   G+  +  TYSIL  
Sbjct: 65  AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F   SQ+S A  V+ K++  G +PDIVT   L+ G+C    + + + L   M+  G++ 
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +   ++ L+  + +  R  EA+ L+  M   G +PDLVTY I++ GLCK+  +  A+ L 
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M   +I P    +  I+  LC  + + +A   F  +       +VV YN +I      
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   +A +L   +IE++I+P++VTF++LI  F K GK+ +A +L D +    ++P   TY
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           ++ +N +C    +     + + M +K   P  VTY  +IKG CK  ++ E ++L  +M  
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+  + +TY T+I  F + ++   A  +  QM    + P   TY+IL+DGLC NG ++ 
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--S 594
           A  +   LQ   +      Y  +I+  C  G V      FC +  KG + ++  YT   S
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544

Query: 595 FFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
            FC              M   G  PD      ++ A  + GD  +  EL   M
Sbjct: 545 GFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 243/473 (51%), Gaps = 5/473 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPR 61
           + R   +  A+ V+AKM +L  +  I T NSLL    H + + D    +   +++   P 
Sbjct: 126 FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP- 184

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + +T + +I GL + +R  +A+  +     K   P +V+   +++  CK G  ++A  L 
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M +  + P    YN +I  LC   ++ +AL    +M   G+ P+ +TY+ L +     
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            + S A +++  ++ +  +P++VT++ LI  + + G + E  KL + M+ +    ++  Y
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S L++  C   R+DEA  +   M +    P++VTY+ LI+G CK  +V + ++L+ EM  
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + +  N+  +  ++ G  +      A++ F  ++    + D++ Y+I++DG    G +  
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ ++  L   ++ P I T+N +I G CK GKV D   L  ++ L G++P+ VTYTT M+
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            +C +G  +   AL +EM+ +   P   TY  +I+   +      + +L+ +M
Sbjct: 545 GFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 219/433 (50%), Gaps = 3/433 (0%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVYTNSI 68
           + DAV ++ +M E+  +    T+N+L++ L RH        L D + V     ++ T  I
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           V++GLC++  +  A+  L++    +  P VV  N I+   C       A  LF  M   G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + P+  +YN LI  LC  G   +A    +DM    + P+ +T+S L   F    ++  A 
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           K+  +++ +  DPDI TY+ LI G+C    ++E   + E+M+S+    NV+ Y+ L+   
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK+ R+DE + L  EM   GL  + VTY+ LI G  +  +   A  ++ +M S  + P+ 
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  +L GLC    +  A + F+ L  S    D+  YNIMI+G  K G + +   L+  
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           L  K + P++VT+ +++ GFC+ G   +A  L   +K  G  P + TY T + A+  +G+
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586

Query: 429 IQRLLALLQEMET 441
                 L++EM +
Sbjct: 587 KAASAELIREMRS 599



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 157/324 (48%), Gaps = 11/324 (3%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDD-IKVSETPRNVYT 65
           G   DA  +++ M E  +  ++ T+++L+        + +   LYD+ IK S  P +++T
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP-DIFT 363

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            S +I+G C   RL +A    +    K+  P+VV+ N ++  +CK    +    LF  M 
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + GL  +  +Y  LIHG   A   + A      M   GV PD +TYSIL  G     ++ 
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  V + L     +PDI TY ++I G C+ G VE+G  L   +  +G K NV+ Y+ ++
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 543

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           S  C+ G  +EA  L  EM+  G  PD  TY+ LIR   +      + +L  EM S R  
Sbjct: 544 SGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR-- 601

Query: 306 PNSFAHGAILLGLCEKEMITEARM 329
              F   A  +GL    M+ + R+
Sbjct: 602 ---FVGDASTIGLV-TNMLHDGRL 621



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 50/123 (40%)

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           KL +AV L  DM      P  + ++ ++ +  K         L  QM    +     TY+
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           ILI+  C    L  A  +L  + +       V   +++   C    +  A++   QMVE 
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 583 GFE 585
           G++
Sbjct: 181 GYQ 183


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 184/664 (27%), Positives = 314/664 (47%), Gaps = 21/664 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYN----SLLYNLRHTDIMWDLYDDIKV 56
           +L  VY R GMV  AV   + M     K S+ T N    S++ N R   ++W  +  +  
Sbjct: 110 LLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCR-AHLVWXFFKQMLT 168

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           S    NV + +I+I  LC Q +L+ A+  L       + P++VS N ++S  CK G  + 
Sbjct: 169 SRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKF 228

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  L   M   G+  D  +YN+ I  LC      +       M    + P+ ++Y+ L  
Sbjct: 229 ALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLIN 288

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           GF    +I  A +V  +++     P+++TY +LI GYC  GN EE L+L +VM +   + 
Sbjct: 289 GFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRP 348

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N +    LL+ + KS + D A  +L          + ++++++I GLC+   + +A QL 
Sbjct: 349 NEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLL 408

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EMC   + P+      ++ G C+   + +A+     +     + + V+++ +I    K+
Sbjct: 409 IEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKV 468

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           GN+ E ++ Y  +     +    T NSL+   C+NGK+ +A   L  I   GL P++VT+
Sbjct: 469 GNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTF 528

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              +N Y   G+     ++  +M +    P+  TY  ++K LCK     EA +LL+ ++ 
Sbjct: 529 DCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHC 588

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
           I +  D I+YNT+I    K  +L +A +L  +M  +N+ P S TY  ++ GL   G L  
Sbjct: 589 IPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVC 648

Query: 537 ADCLLVSLQEHNI-SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI------SIR 589
           A   L  L +  I +L  + YT  I      G    A+  F +M EKG  +      SI 
Sbjct: 649 AFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSIT 708

Query: 590 D-YTK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           D Y++        S      +    P+     ++L  + +G D+ S F+L  +M +SG  
Sbjct: 709 DGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFF 768

Query: 641 PDKF 644
           P++ 
Sbjct: 769 PNRL 772



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 157/611 (25%), Positives = 299/611 (48%), Gaps = 29/611 (4%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           I+++ +P N+ T +I+I+G C     ++A+  L      +  P+ V++  +++   K   
Sbjct: 307 IELNLSP-NLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAK 365

Query: 114 AEVAKGLFCLMLKYGLHP---DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
            +VA+ +   + +Y ++    +  S+ ++I GLC  G ++EA +   +M + GV PD IT
Sbjct: 366 FDVARNI---LERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIIT 422

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           +S+L  GF  +  ++ A +V+ K+  +G  P+ V ++ LI   C++GNV EG+K    M 
Sbjct: 423 FSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMN 482

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
             G   +    + L++S+C++G++ EA   L+ +  +GL P+ VT+  +I G        
Sbjct: 483 LNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGS 542

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ---DVVLYN 347
            A  ++++M S    P+ F +G++L  LC+ +   EAR     L   +CI    D + YN
Sbjct: 543 GAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKL---HCIPLAVDTISYN 599

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI-KL 406
            +I    K GN+ EAV+L+ ++I+  I P   T+  ++ G  + G++  A   L  + + 
Sbjct: 600 TLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQK 659

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
             L  +++ YT F++   + G  +  L L +EME K +    +    +  G  +  K+  
Sbjct: 660 EILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFS 719

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A  L+       V P+  T+N ++  + + +D+   F+L N M      P   TY+ LI 
Sbjct: 720 ASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLIL 779

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA------MTFFCQMV 580
           GLC +G L+    +L      + ++  + +  +I+  C   D+ K       M  F   +
Sbjct: 780 GLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSL 839

Query: 581 EKGFEISIRDY------TKSFFCMM---LSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           +K  + ++ D       ++++F  M   L  GF P  +    M+    + GD+   F+L 
Sbjct: 840 DKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLK 899

Query: 632 AVMIKSGLLPD 642
             M+  G+  D
Sbjct: 900 DQMVALGISLD 910



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/528 (24%), Positives = 245/528 (46%), Gaps = 23/528 (4%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           +++LI      G +  A+   + M   G +P   T +++        +    W   +++L
Sbjct: 108 FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQML 167

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
                P++ ++ +LI   C  G +++ + +  +M   G+   +++Y+ LLS  CK GR  
Sbjct: 168 TSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFK 227

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
            AL L++ ME  G++ D+ TY++ I  LC+  +  +   +  +M +K I+PN  ++  ++
Sbjct: 228 FALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            G  ++  I  A   F+ +I  N   +++ YNI+I+GY   GN  EA++L   +    + 
Sbjct: 288 NGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVR 347

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+ VT  +L+ G  K+ K   AR +L+   ++    + +++T  ++  C  G +     L
Sbjct: 348 PNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQL 407

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           L EM    + P  +T++V+I G CK   L +A +++  +Y  G  P+ + ++T+I + CK
Sbjct: 408 LIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCK 467

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
             ++ +  +    M L+     + T N L+  LC NG L  A+  L  +    +    V 
Sbjct: 468 VGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVT 527

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS-------------------IRDYTKSFF 596
           +  II  +   GD   A + F +M+  G   S                    R   K   
Sbjct: 528 FDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLH 587

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           C+ L+     D      +++   + G+L     L   MI++ +LPD +
Sbjct: 588 CIPLA----VDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSY 631



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 154/695 (22%), Positives = 298/695 (42%), Gaps = 109/695 (15%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLK---VSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRN 62
            Y   G   +A+ ++  M+  D++   V+I T  + LY     D+  ++ +   ++ T  N
Sbjct: 325  YCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLN 384

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
              +++++IDGLC+   L +A   L E       P +++ + +++ +CK+G    AK +  
Sbjct: 385  CISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMS 444

Query: 123  LMLKYGLHP-----------------------------------DAFSYNILIHGLCIAG 147
             + + G  P                                   D F+ N L+  LC  G
Sbjct: 445  KIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENG 504

Query: 148  SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
             + EA EF + + R G+ P+++T+  +  G+  +   SGA+ V  K++  G  P   TY 
Sbjct: 505  KLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYG 564

Query: 208  VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
             L+   C+  N  E  KL + +      ++ I+Y+ L+  + KSG + EA+ L  EM   
Sbjct: 565  SLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQN 624

Query: 268  GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI-SPNSFAHGAILLGLCEKEMITE 326
             + PD  TY+ ++ GL ++ ++  A      +  K I + NS  +   + GL +      
Sbjct: 625  NILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKA 684

Query: 327  ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
            A   F  +       D++  N + DGY ++G +  A  L  +   K + P++ TFN L++
Sbjct: 685  ALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLH 744

Query: 387  GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
            G+ +   +    +L + ++  G  P+ +TY + +   C  G ++  + +L+    ++   
Sbjct: 745  GYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTI 804

Query: 447  THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT--------------------- 485
              +T+ ++I+  C+   L + + L  +M V  V+ D+ T                     
Sbjct: 805  DDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFM 864

Query: 486  --------------YNTIIRSFCKCKDLRKAFQLLNQ----------------------- 508
                          Y T+++  C+  D++ AF+L +Q                       
Sbjct: 865  HEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALC 924

Query: 509  ------MWLHNLE------PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
                  MW+          PT++T+  L+   C   + K A  L + ++ + + L  VAY
Sbjct: 925  GKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAY 984

Query: 557  TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
              +I A CA GDV  A+ F+ ++ +KG   ++  Y
Sbjct: 985  NVLISACCANGDVITALDFYEEIKQKGLLPNMTTY 1019



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 110/504 (21%), Positives = 226/504 (44%), Gaps = 16/504 (3%)

Query: 14   DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVI 70
            +A  ++ K+  + L V   +YN+L+  +  +  + +   L++++  +    + YT + ++
Sbjct: 578  EARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCIL 637

Query: 71   DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI-----MSRYCKLGFAEVAKGLFCLML 125
             GL ++ RL  A +FL     KE    +++LN+I     +    K G ++ A  LF  M 
Sbjct: 638  SGLIREGRLVCAFIFLGRLMQKE----ILTLNSIVYTCFIDGLFKAGQSKAALYLFKEME 693

Query: 126  KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
            + GL  D  + N +  G    G +  A    +      V P+  T++IL  G+     I 
Sbjct: 694  EKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIM 753

Query: 186  GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
              +K+   +   G  P+ +TY  LI G C  G +E G+K+ ++ +++   ++ + +++L+
Sbjct: 754  SCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLI 813

Query: 246  SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
               C+   +D+ + L + ME   +  D  T   +   L ++          +EM  K   
Sbjct: 814  RKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFI 873

Query: 306  PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
            P S  +  ++  +C    I  A    D ++      D      M+ G    G I EA+ +
Sbjct: 874  PTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWI 933

Query: 366  YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++++  +  P+  TF +L++ FCK     +A  L   ++ + ++   V Y   ++A C 
Sbjct: 934  LQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCA 993

Query: 426  EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
             G++   L   +E++ K + P   TY V++  +  +  +     +L+D+   G+    + 
Sbjct: 994  NGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLD 1053

Query: 486  YNTIIRSFCKCKDLRKAFQLLNQM 509
                 +S   C+D   A + LN +
Sbjct: 1054 G----KSQKSCRDFVVAIKKLNSL 1073



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 96/207 (46%)

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
           S +   F+ LI  + + G V  A     ++ + G +PS  T    M +  +      +  
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWX 161

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
             ++M T  + P   ++ ++I  LC Q KL++AV +L  M   G  P  ++YNT++   C
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K    + A  L++ M    ++    TYN+ ID LC N        +L  ++   I+  +V
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           +Y T+I     EG +  A   F +M+E
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIE 308


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 251/493 (50%), Gaps = 20/493 (4%)

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +  +  T  M   G+ P+  T SIL   F  L ++  A+ V+ K++  G  P IVT+T L
Sbjct: 115 DTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTL 174

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I   C++G   + ++L + M+++G + +V  Y+ +++ +CK G    A GLL +ME  G 
Sbjct: 175 INWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGC 234

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           +P++VTYS +I    K  +V++A+ +++ M  K ISP+ F + +++ GLC      EA  
Sbjct: 235 QPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASA 294

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             + +   N + D+V +N+++D   K G + EA  + + + E  + P +VT++SL+YG+ 
Sbjct: 295 LLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYS 354

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
              +V +AR+L D +   G +P   +Y   +N YC+   I     L  EM  + + P +V
Sbjct: 355 LRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNV 414

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           +Y  +I GLC+   L+EA  L ++M+  G  P+  TY+ ++  FCK     KAF+L   M
Sbjct: 415 SYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAM 474

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
                +P    YNILID +C +G+L++A  L   L    +      YTTII   C EG +
Sbjct: 475 QSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLL 534

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
            +A+  F  M E                    +G PPD+    V++  F    D     +
Sbjct: 535 DEALEAFRNMEE--------------------DGCPPDEISYNVIIRGFLHHKDESRAVQ 574

Query: 630 LAAVMIKSGLLPD 642
           L   M   G + D
Sbjct: 575 LIGEMRDKGFIAD 587



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 144/468 (30%), Positives = 246/468 (52%)

Query: 42  RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSL 101
           ++ D +  L   ++++    N+YT SI+I+      R+  A   L +       P++V+ 
Sbjct: 112 QYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTF 171

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
             +++  CK+G    A  LF  M+  G  PD ++Y  +I+GLC  G    A      M  
Sbjct: 172 TTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEE 231

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            G +P+ +TYS +        +++ A  +   + +KG  PDI TY  LI G C     +E
Sbjct: 232 AGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKE 291

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
              L   M S     +++ ++VL+ ++CK G++ EA G+L  M  +G++PD+VTYS L+ 
Sbjct: 292 ASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMY 351

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           G   + +V +A +L++ M +K   P+ F++  ++ G C+ + I EA+  F+ +I      
Sbjct: 352 GYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTP 411

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           + V YN +I G  +LG++ EA  L++ +      P++ T++ L+ GFCK G    A RL 
Sbjct: 412 NNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLF 471

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             ++    +P+ V Y   ++A C+ GN++    L  E+  K + P    YT +I GLCK+
Sbjct: 472 RAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKE 531

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
             L EA++   +M   G  PD+I+YN IIR F   KD  +A QL+ +M
Sbjct: 532 GLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEM 579



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 246/459 (53%), Gaps = 2/459 (0%)

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           E AG    P++ +L+ +++ +  L   ++A  +   ++K GL P   ++  LI+ LC  G
Sbjct: 125 ELAG--LSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVG 182

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
              +A+E  +DM   G  PD  TY+ +  G   + + + A  +++K+   G  P++VTY+
Sbjct: 183 KFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYS 242

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            +I  + +   V E L +   M  +G   ++  Y+ L+  +C   +  EA  LL EM ++
Sbjct: 243 TIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSL 302

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
            + PD+VT+++L+  +CK+ KV +A  +   M    + P+   + +++ G   +  + EA
Sbjct: 303 NIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEA 362

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           R  FD++I   C  DV  YNI+I+GY K+  I EA QL+ ++I + ++P+ V++N+LI+G
Sbjct: 363 RKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHG 422

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            C+ G + +AR L   +  +G  P+  TY+  ++ +C++G   +   L + M++    P 
Sbjct: 423 LCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPN 482

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            V Y ++I  +CK   L++A +L  +++V G+ P+   Y TII   CK   L +A +   
Sbjct: 483 LVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFR 542

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
            M      P   +YN++I G   + D   A  L+  +++
Sbjct: 543 NMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRD 581



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 228/442 (51%), Gaps = 5/442 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           +S    V  A  V+AK+ +L L+ +I T+ +L+  L    +    M +L+DD+       
Sbjct: 143 FSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAM-ELFDDMVARGCRP 201

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +VYT + +I+GLC+      A   L++       P+VV+ + I+  + K      A  +F
Sbjct: 202 DVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIF 261

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G+ PD F+YN LI GLC     +EA    N+M    + PD +T+++L       
Sbjct: 262 SYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKE 321

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++S A  V++ +   G +PD+VTY+ L+ GY     V E  KL + M+++G K +V +Y
Sbjct: 322 GKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSY 381

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++L++  CK  RIDEA  L  EM   GL P+ V+Y+ LI GLC+   + +A  L+  M +
Sbjct: 382 NILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHT 441

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               PN F +  +L G C++    +A   F ++  +    ++V+YNI+ID   K GN+ +
Sbjct: 442 NGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRD 501

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +L+ +L  K + P+   + ++I G CK G + +A      ++  G  P  ++Y   + 
Sbjct: 502 ARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIR 561

Query: 422 AYCEEGNIQRLLALLQEMETKA 443
            +    +  R + L+ EM  K 
Sbjct: 562 GFLHHKDESRAVQLIGEMRDKG 583



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 147/330 (44%), Gaps = 21/330 (6%)

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV-QLYRQLIEKRISPS 377
           C    I +A   F+ ++    +  ++ +  ++   VK+G   + V  L +Q+    +SP+
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           I T + LI  F    +V  A  +L  I   GL+P+ VT+TT +N  C+ G   + + L  
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           +M  +   P   TYT +I GLCK  +   A  LL+ M   G  P+ +TY+TII S  K +
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            + +A  + + M +  + P   TYN LI GLC     K A  LL  ++  NI    V + 
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIA 617
            ++   C EG V +A      M E G E  +  Y+   +      G+    E+ E     
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMY------GYSLRSEVVEAR--- 363

Query: 618 FHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                      +L   MI  G  PD F  N
Sbjct: 364 -----------KLFDAMITKGCKPDVFSYN 382


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 154/547 (28%), Positives = 266/547 (48%), Gaps = 20/547 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P   S N ++ R  K G  ++ +  F  M+  G+ P  F+YN++I  LC  G +E +   
Sbjct: 252 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 311

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M   G+ PD +TY+ L  G+  +  +     +  ++   G  PDI+TY  LI  YC+
Sbjct: 312 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 371

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              +    +    M + G K NV+ YS L+ + CK G +  A+ L  +M   GL P+  T
Sbjct: 372 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFT 431

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI   CK   + +A +L N+M    +  N   + A+L GLC+   + EA   F S++
Sbjct: 432 YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 491

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 +  +Y  ++ GY+K   + +A+++ +Q+ E  I P ++ + S+I+G C   K+ 
Sbjct: 492 KDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLE 551

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           + + +L+ +K  G+  + V  TT ++AY + G     L   QEM+   +  T VTY V+I
Sbjct: 552 ETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLI 611

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLCK   ++ AV     M  +G+ P+   Y ++I   CK   +  A +L ++M    + 
Sbjct: 612 DGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMT 671

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P    +  LIDG   +G+L+ A  L+  + E  I      YT+++      G++H+A  F
Sbjct: 672 PDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKF 731

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
           F +M+EK                    G  P++ +C  +L  +++ G L    EL   M 
Sbjct: 732 FNEMIEK--------------------GILPEEVLCICLLREYYKRGQLDEAIELKNEME 771

Query: 636 KSGLLPD 642
           + GL+ +
Sbjct: 772 RMGLITE 778



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 266/545 (48%), Gaps = 20/545 (3%)

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
            + + S + +LG  E A   F  M  +   P A S N L+H L  +G+ +   +F NDM 
Sbjct: 222 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 281

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
             G+ P   TY+++         +  + ++  ++   G  PD+VTY  LI GY ++G++E
Sbjct: 282 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 341

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
           E   L   M   G   ++I Y+ L++  CK  ++  A     EM+  GLKP++VTYS LI
Sbjct: 342 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 401

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
              CK+  +  AI+L+ +M    + PN F + +++   C+   +TEA    + ++ +   
Sbjct: 402 DAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK 461

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            ++V Y  ++DG  K G + EA +++R +++  ISP+   + +L++G+ K  ++ DA ++
Sbjct: 462 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKI 521

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L  +    ++P  + Y + +  +C +  ++    +L+EM+++ I    V  T +I    K
Sbjct: 522 LKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFK 581

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             K  +A+   ++M  +GV    +TY  +I   CK   +  A     +M    L+P  A 
Sbjct: 582 AGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAV 641

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y  LIDGLC N  +++A  L   +Q   ++    A+T +I  +   G++ +A+    +M 
Sbjct: 642 YTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMT 701

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           E   E  +  YT                     ++  F Q G+L    +    MI+ G+L
Sbjct: 702 ELAIEFDLHVYTS--------------------LVSGFSQCGELHQARKFFNEMIEKGIL 741

Query: 641 PDKFL 645
           P++ L
Sbjct: 742 PEEVL 746



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 258/554 (46%), Gaps = 38/554 (6%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPR 61
           V+   G++ +A    ++M+        ++ N LL+ L  +    ++   ++D+  +    
Sbjct: 228 VFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAP 287

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+T +++ID LC++  L+++     +       P VV+ N+++  Y K+G  E    LF
Sbjct: 288 SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 347

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G  PD  +YN LI+  C    M  A E+ ++M  +G++P+ +TYS L   F   
Sbjct: 348 NEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKE 407

Query: 182 SQISGA-----------------------------------WKVIQKLLIKGSDPDIVTY 206
             + GA                                   WK++  +L  G   +IVTY
Sbjct: 408 GMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTY 467

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T L+ G C+ G + E  ++   ML  G   N   Y+ L+    K+ R+++A+ +L +M  
Sbjct: 468 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 527

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
             +KPDL+ Y  +I G C Q K+ +   +  EM S+ IS N      I+    +    ++
Sbjct: 528 CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSD 587

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A  +F  +        +V Y ++IDG  K G +  AV  + +++   + P++  + SLI 
Sbjct: 588 ALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLID 647

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G CKN  +  A++L D ++  G+ P    +T  ++   + GN+Q  L L+  M   AI  
Sbjct: 648 GLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF 707

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
               YT ++ G  +  +L +A +   +M   G+ P+++    ++R + K   L +A +L 
Sbjct: 708 DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELK 767

Query: 507 NQMWLHNLEPTSAT 520
           N+M    L   SAT
Sbjct: 768 NEMERMGLITESAT 781



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 167/350 (47%), Gaps = 25/350 (7%)

Query: 321 KEMITEARM--------YFDSLIMSN--CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           KE+I  +RM         FD L  +   C+    +++++   +V+LG + EA + + ++ 
Sbjct: 187 KEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMR 246

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
             R  P   + N L++   K+G     R+  + +   G+ PS  TY   ++  C+EG+++
Sbjct: 247 NFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLE 306

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L  +M    + P  VTY  +I G  K   L+E   L  +M  +G  PD ITYN +I
Sbjct: 307 NSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLI 366

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             +CK + + +AF+  ++M  + L+P   TY+ LID  C  G ++ A  L V ++   + 
Sbjct: 367 NCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLL 426

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSF 595
             +  YT++I A+C  G++ +A      M++ G +++I  YT               +  
Sbjct: 427 PNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEV 486

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           F  ML +G  P+Q++   ++  + +   +    ++   M +  + PD  L
Sbjct: 487 FRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLIL 536


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 156/521 (29%), Positives = 253/521 (48%), Gaps = 32/521 (6%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS  S N ++          VA  +F  ML  G+ P+ +++ +++  LC+   ++ A   
Sbjct: 173 PSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLL 232

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             DM +HG  P+++ Y  L        ++  A K+++++ + G  PD+ T+  +I G+C+
Sbjct: 233 LRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCR 292

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM----------- 264
           +  V EG KL + M+ +GF  N + Y  L+  +CK+ RIDEA  LL ++           
Sbjct: 293 LNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTL 352

Query: 265 -----------EAV----------GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
                      EA           G  PD+ T+S L+ GLCK+     A++L N+M +K 
Sbjct: 353 VNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKG 412

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN   +  ++ G C+K  + EA +    ++      + V YN +I    K G I EA+
Sbjct: 413 CKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEAL 472

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            ++ ++  K   P I TFNSLI+G C+  ++ DA  L   + L G+  ++VT+ T ++A+
Sbjct: 473 DMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAF 532

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
              G IQ  L L+ +M  +      +TY  +IK LCK   +++ + L E+M   G+TP  
Sbjct: 533 LRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSI 592

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           IT N +I  FC    +  A + +  M      P   TYN LI+GLC  G ++ A  L   
Sbjct: 593 ITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEK 652

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           LQ   I    + Y T+I   C EG    A     + VE GF
Sbjct: 653 LQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGF 693



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 148/466 (31%), Positives = 241/466 (51%), Gaps = 7/466 (1%)

Query: 32  QTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAG 91
           QT    L      D    L +++ +   P +V T + VI G C+ +R+ +    +     
Sbjct: 249 QTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMIL 308

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           K F P+ ++   +M   CK    + A+ L    L     P+   +N L++G    G + E
Sbjct: 309 KGFTPNDMTYGYLMHGLCKTCRIDEAQAL----LSKVPGPNVVHFNTLVNGFVRNGRLNE 364

Query: 152 ALEFTND-MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           A  F  D M  +G  PD  T+S L  G         A +++  +  KG  P++ TYT+LI
Sbjct: 365 ATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILI 424

Query: 211 CGYCQIGNVEE-GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
            G+C+ G +EE GL LRE ML++GF LN + Y+ L+S++CK G+I EAL +  EM + G 
Sbjct: 425 DGFCKKGQLEEAGLILRE-MLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGC 483

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           KPD+ T++ LI GLC+ D++  A+ LY +M  + +  NS     ++     +  I EA  
Sbjct: 484 KPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALK 543

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             + ++   C  D + YN +I    K G + + + L+ ++I K ++PSI+T N LI GFC
Sbjct: 544 LVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFC 603

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
             GKV +A   +  +   G  P  VTY + +N  C+ G IQ  L L ++++ + I P  +
Sbjct: 604 TAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSI 663

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           TY  +I  LC++    +A  LL      G  P+ +T+N ++ +F K
Sbjct: 664 TYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGK 709



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 156/560 (27%), Positives = 280/560 (50%), Gaps = 9/560 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDL-KVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
           Y R G+   A  ++  MK +   + S ++YN +L  L       +  +++ D+       
Sbjct: 149 YGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSP 208

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N YT  +V+  LC  + + +A L L++       P+ +    ++    K    + A  L 
Sbjct: 209 NDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLL 268

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G  PD  ++N +I+G C    + E  +  + M   G  P+ +TY  L  G    
Sbjct: 269 EEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKT 328

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LREVMLSQGFKLNVIA 240
            +I  A    Q LL K   P++V +  L+ G+ + G + E    + + M++ G+  +V  
Sbjct: 329 CRIDEA----QALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFT 384

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           +S L++ +CK G    AL L+ +M+A G KP+L TY+ILI G CK+ ++ +A  +  EM 
Sbjct: 385 FSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREML 444

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +K  S N+  + A++  LC+   I EA   F  +    C  D+  +N +I G  ++  + 
Sbjct: 445 TKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEME 504

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A+ LYR ++ + +  + VTFN+LI+ F + G++ +A +L++ +   G     +TY   +
Sbjct: 505 DALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLI 564

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
            A C+ G +++ L L +EM  K + P+ +T  ++I G C   K+  A++ + DM   G +
Sbjct: 565 KALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFS 624

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +TYN++I   CK   +++A  L  ++    ++P S TYN LI  LC  G   +A  L
Sbjct: 625 PDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFL 684

Query: 541 LVSLQEHNISLTKVAYTTII 560
           L    E+      V +  ++
Sbjct: 685 LYRGVENGFVPNDVTWNILV 704



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 245/519 (47%), Gaps = 21/519 (4%)

Query: 146 AGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
           AG   +A     DM G +  EP   +Y+++     + +  S A  V   +L KG  P+  
Sbjct: 152 AGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDY 211

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           T+ +++   C +  V+    L   M   G   N + Y  L+ ++ K  R+DEAL LL EM
Sbjct: 212 TFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEM 271

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
             +G  PD+ T++ +I G C+ ++V +  +L + M  K  +PN   +G ++ GLC+   I
Sbjct: 272 FLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRI 331

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ-LYRQLIEKRISPSIVTFNS 383
            EA+     +   N    VV +N +++G+V+ G + EA   +Y ++I     P + TF++
Sbjct: 332 DEAQALLSKVPGPN----VVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFST 387

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L+ G CK G    A  L++ +   G +P+  TYT  ++ +C++G ++    +L+EM TK 
Sbjct: 388 LVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKG 447

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
                V Y  +I  LCK  K+ EA+ +  +M   G  PD  T+N++I   C+  ++  A 
Sbjct: 448 FSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDAL 507

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L   M L  +   S T+N LI      G+++ A  L+  +      L ++ Y  +IKA 
Sbjct: 508 ALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKAL 567

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIR--DYTKSFFCM-------------MLSNGFPPDQ 608
           C  G V K +  F +M+ KG   SI   +   + FC              M+  GF PD 
Sbjct: 568 CKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDI 627

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                ++    + G +     L   +   G+ PD    N
Sbjct: 628 VTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYN 666



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 192/368 (52%), Gaps = 4/368 (1%)

Query: 6   YSRTGMVHDAV-FVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPR 61
           + R G +++A  FV  KM        + T+++L+  L    +     +L +D+       
Sbjct: 356 FVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKP 415

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+ T +I+IDG C++ +L++A L L+E   K F  + V  NA++S  CK G    A  +F
Sbjct: 416 NLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMF 475

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G  PD F++N LI GLC    ME+AL    DM   GV  +++T++ L   F   
Sbjct: 476 GEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRR 535

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A K++  +L +G   D +TY  LI   C+ G VE+GL L E M+ +G   ++I  
Sbjct: 536 GEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITC 595

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++L++  C +G++  AL  + +M   G  PD+VTY+ LI GLCK+ ++ +A+ L+ ++ +
Sbjct: 596 NILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQA 655

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + I P+S  +  ++  LC +    +A       + +  + + V +NI++  + K  N   
Sbjct: 656 EGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEG 715

Query: 362 AVQLYRQL 369
               Y Q 
Sbjct: 716 QTITYAQF 723


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 141/441 (31%), Positives = 239/441 (54%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           +V SLN +++  C+L   + A  +   M K G+HP A ++N LI+GLC  G ++EA+E  
Sbjct: 122 NVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELF 181

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           N+M R G EP+ I+Y+ +  G       S A  V +K+   G  PD+VTY  +I   C+ 
Sbjct: 182 NEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKD 241

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
             V + ++    ML +G   NV  Y+ ++   C  G+++EA  L  EM    + PD VT 
Sbjct: 242 RLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTL 301

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +IL+ GLCK+  V +A  ++  M  K + PN   + A++ G C + ++ EA+  F+ +I 
Sbjct: 302 TILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIR 361

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
             C   V  YNI+I+G+ K   + EA  L  ++  K ++P  VT+++L+ G C+ G+  +
Sbjct: 362 QGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKE 421

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  +   +  +GL P+ VTY+  ++ +C+ G++   L LL+ M+ K + P  V +T++I+
Sbjct: 422 ALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIE 481

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           G+    KL+ A +L   ++  G+ P   TY  +I+   K     +A+ L  +M      P
Sbjct: 482 GMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 541

Query: 517 TSATYNILIDGLCVNGDLKNA 537
            S +YN++I G   N D   A
Sbjct: 542 NSCSYNVMIQGFLQNQDSSTA 562



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 236/464 (50%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M++    P    +   +            +   N M   GV  +  + ++L      
Sbjct: 76  FYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCR 135

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L+ +  A  ++ K+   G  P   T+  LI G C  G ++E ++L   M+ +G + NVI+
Sbjct: 136 LNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVIS 195

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ +++ +CK+G    A+ +  +ME  G KPD+VTY+ +I  LCK   V+ A++  +EM 
Sbjct: 196 YNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEML 255

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            + I PN F +  ++ G C    + EA   F  ++  + + D V   I++DG  K G + 
Sbjct: 256 DRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVS 315

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  ++  + EK + P+I T+N+L+ G+C    + +A+++ + +   G  P   +Y   +
Sbjct: 316 EARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILI 375

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N +C+   +    +LL EM  KA+ P  VTY+ +++GLC+  + +EA+ + ++M   G+ 
Sbjct: 376 NGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLL 435

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ +TY+ ++  FCK   L +A +LL  M    LEP    + ILI+G+ + G L+ A  L
Sbjct: 436 PNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKEL 495

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
              L    I  T   YT +IK    EG   +A   F +M + GF
Sbjct: 496 FSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 539



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 255/496 (51%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PSV      +  + K         L   M  +G+  + +S N+LI+ LC    ++ A+  
Sbjct: 86  PSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI 145

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + G+ P A T++ L  G     +I  A ++  +++ +G +P++++Y  +I G C+
Sbjct: 146 LGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCK 205

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            GN    + + + M   G K +V+ Y+ ++ S+CK   +++A+  L EM   G+ P++ T
Sbjct: 206 TGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFT 265

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ ++ G C   ++++A +L+ EM  + + P++     ++ GLC++ M++EAR+ F+++ 
Sbjct: 266 YNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMT 325

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 ++  YN ++DGY     + EA +++  +I +  +P + ++N LI GFCK+ ++ 
Sbjct: 326 EKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMD 385

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A+ LL  +    L P  VTY+T M   C+ G  +  L + +EM +  + P  VTY++++
Sbjct: 386 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILL 445

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G CK   L EA++LL+ M    + P+ + +  +I        L  A +L ++++   + 
Sbjct: 446 DGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIR 505

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           PT  TY ++I GL   G    A  L   +++        +Y  +I+      D   A+  
Sbjct: 506 PTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRL 565

Query: 576 FCQMVEKGFEISIRDY 591
             +MV K F  ++  +
Sbjct: 566 IDEMVGKRFSANLSTF 581



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 238/503 (47%), Gaps = 15/503 (2%)

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           S+++AL     M R    P    +      F    Q S    +  ++ + G   ++ +  
Sbjct: 68  SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           VLI   C++ +V+  + +   M   G       ++ L++ +C  G+I EA+ L  EM   
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G +P++++Y+ +I GLCK      A+ ++ +M      P+   +  I+  LC+  ++ +A
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
             +   ++      +V  YN M+ G+  LG + EA +L+++++ + + P  VT   L+ G
Sbjct: 248 MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDG 307

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G V++AR + +T+   G+EP+  TY   M+ YC +  +     + + M  +   P 
Sbjct: 308 LCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPG 367

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             +Y ++I G CK  ++ EA  LL +MY   + PD +TY+T+++  C+    ++A  +  
Sbjct: 368 VHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFK 427

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M  + L P   TY+IL+DG C +G L  A  LL S+QE  +    V +T +I+     G
Sbjct: 428 EMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAG 487

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICE 612
            +  A   F ++   G   +IR YT                  F  M  +GF P+     
Sbjct: 488 KLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYN 547

Query: 613 VMLIAFHQGGDLGSVFELAAVMI 635
           VM+  F Q  D  +   L   M+
Sbjct: 548 VMIQGFLQNQDSSTAIRLIDEMV 570



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 200/381 (52%), Gaps = 3/381 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           +TG    AV V  KM++   K  + TYN+++ +L   R  +   +   ++     P NV+
Sbjct: 205 KTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVF 264

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + ++ G C   +L +A    +E  G++  P  V+L  ++   CK G    A+ +F  M
Sbjct: 265 TYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETM 324

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G+ P+  +YN L+ G C+   M EA +    M R G  P   +Y+IL  GF    ++
Sbjct: 325 TEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRM 384

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  ++ ++  K  +PD VTY+ L+ G CQ G  +E L + + M S G   N++ YS+L
Sbjct: 385 DEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSIL 444

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L   CK G +DEAL LL  M+   L+P++V ++ILI G+    K+  A +L++++ +  I
Sbjct: 445 LDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGI 504

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P    +  ++ GL ++ +  EA   F  +     + +   YN+MI G+++  +   A++
Sbjct: 505 RPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIR 564

Query: 365 LYRQLIEKRISPSIVTFNSLI 385
           L  +++ KR S ++ TF  L+
Sbjct: 565 LIDEMVGKRFSANLSTFQMLL 585



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 24/235 (10%)

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT--VVIKGLCKQWKLQEA 467
            PS   +  F+ ++ ++     +++L  +M+    G TH  Y+  V+I  LC+   +  A
Sbjct: 85  RPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDL--FGVTHNVYSLNVLINCLCRLNHVDFA 142

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           V +L  M+ +G+ P   T+N +I   C    +++A +L N+M     EP   +YN +I+G
Sbjct: 143 VSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIING 202

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC  G+   A  +   ++++      V Y TII + C +  V+ AM F  +M+++     
Sbjct: 203 LCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDR----- 257

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                          G PP+      M+  F   G L     L   M+   ++PD
Sbjct: 258 ---------------GIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPD 297


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 177/601 (29%), Positives = 279/601 (46%), Gaps = 27/601 (4%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPS--VVSLNAIMSRYCKLGFAEVA 117
           P  V   +I+I  LC   R+ DA     E      G S  VV+ N +++ YC+ G  E A
Sbjct: 95  PLPVVPCNILIKRLCSGGRVADA-----ERVFATLGASATVVTYNTMVNGYCRAGRIEDA 149

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   M      PD F++N LI  LC+ G + +AL   +DM   G  P  +TYSIL   
Sbjct: 150 RRLISGM---PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDA 206

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
               S    A  ++ ++  KG +PDIVTY VLI   C  G+V+E L +   + S G K +
Sbjct: 207 TCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPD 266

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + Y+ +L S+C S R  E   L  EM +    PD VT++ ++  LC+Q  V +AI++ +
Sbjct: 267 AVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVD 326

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            M      P+   + +IL GLC+   + +A      L    C  D + Y  ++ G   + 
Sbjct: 327 HMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIE 386

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
               A +L  +++     P  VTFN++I   C+ G V  A ++++ +  +G  P  VTY 
Sbjct: 387 QWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYN 446

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           + ++  C E  I   + LL  +++    P  VT+  ++KGLC   + ++A QL+ +M   
Sbjct: 447 SIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHS 506

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
              PD  T+NT+I S C+   L +A + L  M  +   P  +TYNI++D L   G  + A
Sbjct: 507 DCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEA 566

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE---ISIR----- 589
             LL  +      L  + Y T+I      G + +A+     MV  G     I+ R     
Sbjct: 567 LKLLSGMTNGTPDL--ITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYG 624

Query: 590 -------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                  D      C +   G  PD      +L+ F Q        +  A M+ SG +PD
Sbjct: 625 ICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPD 684

Query: 643 K 643
           +
Sbjct: 685 E 685



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 255/530 (48%), Gaps = 10/530 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y R G + DA  +I+ M          T+N L+  L    R  D +  ++DD+       
Sbjct: 140 YCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRVPDALA-VFDDMLHRGCSP 195

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T SI++D  C+ S  + A++ L E   K   P +V+ N +++  C  G  + A  + 
Sbjct: 196 SVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNIL 255

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +  +G  PDA +Y  ++  LC +   +E  E   +M  +   PD +T++ +       
Sbjct: 256 SDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQ 315

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A KV+  +   G  PDIVTY+ ++ G C +G V++ ++L   + S G K + IAY
Sbjct: 316 GLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAY 375

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +L  +C   + + A  L+ EM      PD VT++ +I  LC++  V +AI++  +M  
Sbjct: 376 TTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSE 435

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
              +P+   + +I+ GLC +  I +A     +L    C  D+V +N ++ G   +    +
Sbjct: 436 NGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWED 495

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A QL   ++     P   TFN++I   C+ G +  A   L  +  +G  P+  TY   ++
Sbjct: 496 AEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVD 555

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           A  + G  Q  L LL  M      P  +TY  VI  + K  K++EA+ LL  M   G++P
Sbjct: 556 ALLKAGKTQEALKLLSGMTNGT--PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSP 613

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
           D ITY ++    C+     +A ++L ++    L P +  YN ++ G C N
Sbjct: 614 DTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQN 663



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 243/495 (49%), Gaps = 5/495 (1%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A+ ++ +M+    +  I TYN L+    N    D   ++  D+       +  T + V+ 
Sbjct: 216 AMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLK 275

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
            LC   R ++      E A  +  P  V+ N I++  C+ G  + A  +   M ++G  P
Sbjct: 276 SLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIP 335

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  +Y+ ++ GLC  G +++A+E  + +  +G +PD I Y+ + KG   + Q   A +++
Sbjct: 336 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELM 395

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            +++     PD VT+  +I   CQ G V+  +K+ E M   G   +++ Y+ ++  +C  
Sbjct: 396 AEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNE 455

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
             ID+A+ LL  +++ G KPD+VT++ L++GLC  D+   A QL   M      P++   
Sbjct: 456 RCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTF 515

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++  LC+K ++ +A      +  + CI +   YNI++D  +K G   EA++L   +  
Sbjct: 516 NTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTN 575

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
              +P ++T+N++I    K GK+ +A  LL  +  +GL P  +TY +     C E    R
Sbjct: 576 G--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDR 633

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            + +L  ++   + P    Y  ++ G C+ W+   A+     M   G  PD+ TY  ++ 
Sbjct: 634 AIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLE 693

Query: 492 SFCKCKDLRKAFQLL 506
           +      L +A QLL
Sbjct: 694 ALAYECLLDEAKQLL 708



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 161/609 (26%), Positives = 266/609 (43%), Gaps = 83/609 (13%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIV 69
           G V DA  V A    L    ++ TYN+++        + D    I     P + +T + +
Sbjct: 112 GRVADAERVFAT---LGASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNPL 168

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           I  LC + R+ DA+    +   +   PSVV+ + ++   CK      A  L   M   G 
Sbjct: 169 IRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGC 228

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            PD  +YN+LI+ +C  G ++EAL   +D+  HG +PDA+TY+ + K        S  WK
Sbjct: 229 EPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCG----SERWK 284

Query: 190 VIQKLLIKGSD----PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            +++L  + +     PD VT+  ++   CQ G V+  +K+ + M   G   +++ YS +L
Sbjct: 285 EVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSIL 344

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +C  GR+D+A+ LL  +++ G KPD + Y+ +++GLC  ++   A +L  EM      
Sbjct: 345 DGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCP 404

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+      ++  LC+K ++  A    + +  + C  D+V YN +IDG      I +A++L
Sbjct: 405 PDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMEL 464

Query: 366 YRQLIEKRISPSIVTFNS-----------------------------------LIYGFCK 390
              L      P IVTFN+                                   +I   C+
Sbjct: 465 LSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQ 524

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G +  A   L  +  +G  P+  TY   ++A  + G  Q  L LL  M      P  +T
Sbjct: 525 KGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGT--PDLIT 582

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN--- 507
           Y  VI  + K  K++EA+ LL  M   G++PD ITY ++    C+     +A ++L    
Sbjct: 583 YNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQ 642

Query: 508 -------------------QMWLHNLE-------------PTSATYNILIDGLCVNGDLK 535
                              Q W  ++              P  +TY IL++ L     L 
Sbjct: 643 DMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLD 702

Query: 536 NADCLLVSL 544
            A  LLV+L
Sbjct: 703 EAKQLLVNL 711


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 165/568 (29%), Positives = 278/568 (48%), Gaps = 2/568 (0%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           ++ +AI   +        PS++  + + S   +    ++  G    M   G+  + ++ N
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           I+I+  C    +  A        + G EP+ IT+S L  GF L  ++S A  ++ +++  
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
              P++VT   LI G C  G V E L L + M+  G + N I Y  +L+ MCKSG    A
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L L  +ME   +K  +V YSI+I  LCK   +  A+ L+NEM  K I  +  A+ +I+ G
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGG 288

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC      +       +I  N I +VV ++ +ID +VK G + EA +LY +++ + I+P 
Sbjct: 289 LCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPD 348

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            +T++SLI GFCK  ++ +A ++LD +   G EP+ VTY+  +N+YC+   +   + L  
Sbjct: 349 TITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFC 408

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           E+ +K +    VTY  +++G C+  KL  A +L ++M   GV P  +TY  ++   C   
Sbjct: 409 EISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 468

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
           +L+KA ++  +M    +      YNI+I G+C    + +A  L  SL    +    + Y 
Sbjct: 469 ELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYN 528

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIA 617
            +I   C +G + +A   F +M E G   S   Y       +  +G     E+ E M + 
Sbjct: 529 VMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMR 588

Query: 618 FHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                   S  ++  VM+  G L   FL
Sbjct: 589 GFAAD--ASTIKMVVVMLSDGRLDKTFL 614



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 258/484 (53%)

Query: 42  RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSL 101
           +  D++     ++ ++    N+YT +I+I+  C++ +L  A   +       F P+ ++ 
Sbjct: 83  KEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITF 142

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           + +++ +C  G    A  L   M++    P+  + N LI+GLC+ G + EAL   + M +
Sbjct: 143 STLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVK 202

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
           +G E + ITY  +          + A  + +K+  +     +V Y+++I   C+ GN+++
Sbjct: 203 YGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDD 262

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            L L   M  +G K +V+AYS ++  +C  GR D+   +L EM    + P++VT+S LI 
Sbjct: 263 ALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALID 322

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
              K+ K+ +A +LYNEM ++ I+P++  + +++ G C++  + EA    D ++   C  
Sbjct: 323 VFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEP 382

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           ++V Y+I+I+ Y K   +   ++L+ ++  K +    VT+N+L+ GFC++GK+  A+ L 
Sbjct: 383 NIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELF 442

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +   G+ PS VTY   ++  C+ G +Q+ L + ++M+   +      Y ++I G+C  
Sbjct: 443 QEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNA 502

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            K+ +A  L   + V GV PD +TYN +I   CK   L +A  L  +M      P+  TY
Sbjct: 503 SKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTY 562

Query: 522 NILI 525
           NILI
Sbjct: 563 NILI 566



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 212/409 (51%), Gaps = 3/409 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G V +A+ +I +M +   + +  TY  +L  +    +T +  DL+  ++      +V   
Sbjct: 188 GRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQY 247

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           SIVID LC+   L DA+    E   K     VV+ ++I+   C  G  +    +   M+ 
Sbjct: 248 SIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIG 307

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + P+  +++ LI      G + EA E  N+M   G+ PD ITYS L  GF   +++  
Sbjct: 308 RNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGE 367

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +++  ++ KG +P+IVTY++LI  YC+   V+ G++L   + S+G   + + Y+ L+ 
Sbjct: 368 ANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQ 427

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             C+SG+++ A  L  EM + G+ P +VTY IL+ GLC   ++ KA++++ +M   R+  
Sbjct: 428 GFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMIL 487

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
               +  I+ G+C    + +A   F SL +     DV+ YN+MI G  K G++ EA  L+
Sbjct: 488 GIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLF 547

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           R++ E   +PS  T+N LI        V  +  L++ +K+ G    A T
Sbjct: 548 RKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADAST 596



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 171/362 (47%), Gaps = 32/362 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + G + DA+ +  +M+   +K  +  Y+S                               
Sbjct: 256 KDGNLDDALSLFNEMEMKGIKADVVAYSS------------------------------- 284

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
            +I GLC   R  D    L+E  G+   P+VV+ +A++  + K G    AK L+  M+  
Sbjct: 285 -IIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVAR 343

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+ PD  +Y+ LI G C    + EA +  + M   G EP+ +TYSIL   +    ++   
Sbjct: 344 GIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNG 403

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++  ++  KG   D VTY  L+ G+CQ G +    +L + M+S+G   +V+ Y +LL  
Sbjct: 404 MRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDG 463

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C +G + +AL +  +M+   +   +  Y+I+I G+C   KV  A  L+  +  K + P+
Sbjct: 464 LCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPD 523

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  ++ GLC+K  ++EA M F  +    C      YNI+I  ++    +  +V+L  
Sbjct: 524 VLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIE 583

Query: 368 QL 369
           ++
Sbjct: 584 EM 585



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 100/219 (45%)

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           IS + V++   +     + KV +A  L +++      PS + ++   +A         +L
Sbjct: 30  ISEAKVSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVL 89

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
              +EM+   I     T  ++I   C++ KL  A  ++      G  P+ IT++T+I  F
Sbjct: 90  GFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGF 149

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C    + +A  L+++M      P   T N LI+GLC+ G +  A  L+  + ++     +
Sbjct: 150 CLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANE 209

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           + Y  ++   C  G+   A+  F +M E+  + S+  Y+
Sbjct: 210 ITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYS 248



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 3/208 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           Y +   V + + +  ++    L     TYN+L+     +   ++  +L+ ++     P +
Sbjct: 394 YCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPS 453

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T  I++DGLC    LQ A+   ++         +   N I+   C     + A  LFC
Sbjct: 454 VVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFC 513

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   G+ PD  +YN++I GLC  GS+ EA      M   G  P   TY+IL +     S
Sbjct: 514 SLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGS 573

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            +  + ++I+++ ++G   D  T  +++
Sbjct: 574 GVISSVELIEEMKMRGFAADASTIKMVV 601


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 169/616 (27%), Positives = 293/616 (47%), Gaps = 22/616 (3%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRL--QDAILFLQETAGKEFG--PSVVSLNAIM 105
           LY    +S TP     + +++  +C +S++  + A L++     K+ G  PSV SLN  +
Sbjct: 99  LYTLFSLSSTPMKPLFSDMLL-SICSESKMVSESAELYM---LMKKDGVLPSVASLNLFL 154

Query: 106 SRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE 165
                    E    LF  +++ GL PD F Y   I      G ++ A+E    M R GV 
Sbjct: 155 ESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVS 214

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           P    Y+++  G     ++  A K+  ++L +   P+ +TY  LI GYC++G +EE   +
Sbjct: 215 PGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNI 274

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
           RE M  +  +  +I ++ LL+ +C++  ++EA  +L EME  G  PD  TY+ L  G  K
Sbjct: 275 RERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLK 334

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
              V  +I L  E   K +    +    +L  LC++  + +A       + +      V 
Sbjct: 335 CGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVF 394

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           +N +++GY ++G+I +A     ++    + P+ VT+NSL+  FC+   + +A + +  + 
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMV 454

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             G+ P+  TY T ++ Y       R   +L+EME K + P  ++Y  +I  LCK   + 
Sbjct: 455 EKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANIL 514

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA  +L DM   GV P+   YN +I   C    L+ AF+  ++M    + PT  TYNILI
Sbjct: 515 EAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILI 574

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           +GLC  G +  A+ L   +    +S   + Y ++I  + + G+V KA+  +  M + G +
Sbjct: 575 NGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIK 634

Query: 586 ISIRDYTK--------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
            ++  Y +                +  ML     PD+ I   ++  + + GD+     L 
Sbjct: 635 PTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLH 694

Query: 632 AVMIKSGLLPDKFLIN 647
           + M   G+ PDK   N
Sbjct: 695 SAMEAQGIQPDKMTYN 710



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 156/584 (26%), Positives = 286/584 (48%), Gaps = 4/584 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           + G +  A+ ++  MK   +   +  YN ++  L     M D   L+D++       N  
Sbjct: 194 KLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRI 253

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +IDG C+  +L++A    +    +   P++++ N++++  C+    E A+ +   M
Sbjct: 254 TYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEM 313

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             YG  PD F+Y  L  G    G+++ ++  + +  R GV+    T SIL         +
Sbjct: 314 EVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNM 373

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +V++K L  G  P  V +  ++ GYCQ+G++ +     E M + G + N + Y+ L
Sbjct: 374 EKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSL 433

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   C+   ++EA   + +M   G+ P++ TY+ LI G  +     +  Q+  EM  K +
Sbjct: 434 VKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGL 493

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN  ++G ++  LC+   I EA +    ++    + +  +YN++IDG    G + +A +
Sbjct: 494 KPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFR 553

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
            + +++ + I P++VT+N LI G CK GKV +A  L   I   GL    +TY + ++ Y 
Sbjct: 554 FFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYS 613

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             GN+Q+ L L + M+   I PT  TY  +I G C +  L    ++ ++M  + + PD++
Sbjct: 614 SAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRV 672

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            YN +I  + +  D++KA  L + M    ++P   TYN LI G    G +     L+  +
Sbjct: 673 IYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDM 732

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           +   +      Y  +I  HC   D   A  ++ +M E GF  S+
Sbjct: 733 KIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSV 776



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/538 (28%), Positives = 273/538 (50%), Gaps = 4/538 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y + G + +A  +  +MK  +++ +I T+NSLL  L    +M +   + ++++V     +
Sbjct: 262 YCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPD 321

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T + + DG  +   +  +I   +E   K       + + +++  CK G  E A+ +  
Sbjct: 322 RFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLK 381

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             L+ GL P    +N +++G C  G + +A      M   G+ P+ +TY+ L K F  + 
Sbjct: 382 KFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMK 441

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A K I+K++ KG  P++ TY  LI GY +    +   ++ E M  +G K NVI+Y 
Sbjct: 442 NMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYG 501

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++ +CK   I EA  +L +M   G+ P+   Y++LI G C   K+  A + ++EM ++
Sbjct: 502 CLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAR 561

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I P    +  ++ GLC+K  + EA      +       DV+ YN +I GY   GN+ +A
Sbjct: 562 EIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKA 621

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++LY  + +  I P++ T++ LI G  K G V   +   + ++++ L P  V Y   ++ 
Sbjct: 622 LELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMN-LVPDRVIYNALIHC 680

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           Y E G++Q+  +L   ME + I P  +TY  +I G  K+ ++ +   L+ DM + G+ P 
Sbjct: 681 YVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPK 740

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
             TY+ +I   CK KD   A+    +M+ +   P+ +  + LI GL   G   +AD +
Sbjct: 741 TETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVI 798



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 4/198 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW--DLYDD-IKVSETPRN 62
           YS  G V  A+ +   MK+  +K ++ TY+ L+       ++    +Y + ++++  P  
Sbjct: 612 YSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDR 671

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V  N++ I    +   +Q A         +   P  ++ N ++  + K G     K L  
Sbjct: 672 VIYNAL-IHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVN 730

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   GL P   +Y+ILI G C     + A  +  +M  +G  P       L  G     
Sbjct: 731 DMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEG 790

Query: 183 QISGAWKVIQKLLIKGSD 200
           +   A  +  ++ +KG D
Sbjct: 791 RSHDADVICSEMNMKGKD 808


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 157/526 (29%), Positives = 277/526 (52%), Gaps = 3/526 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAK 118
           NV++ +I++ GLC ++R Q+A+  L   A    G   P VVS   +++ + K G ++ A 
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 216

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             +  ML  G+ PD  +YN +I  LC A +M++A+E  N M ++GV PD +TY+ +  G+
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 276

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               Q   A   ++K+   G +PD+VTY++L+   C+ G   E  K+ + M  +G K  +
Sbjct: 277 CSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y  LL      G + E  GLL  M   G+ PD   +SILI     Q KV +A+ ++++
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSK 396

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  + ++PN+  +GA++  LC+   + +A +YF+ +I        ++YN +I G      
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
              A +L  +++++ I  + + FNS+I   CK G+V ++ +L + +   G++P+ +TY T
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +N YC  G +   + LL  M +  + P  VTY+ +I G CK  ++++A+ L ++M   G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           V+PD ITYN I++   + +    A +L  ++     +   +TYNI++ GLC N    +A 
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            +  +L   ++ L    +  +I A    G   +A   F      G 
Sbjct: 637 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 171/627 (27%), Positives = 307/627 (48%), Gaps = 43/627 (6%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLY--DDIKVSETPRNVYTNSIVID 71
           V+ +M EL    ++ +YN LL  L    R  + +  L+   D +   +P +V + + VI+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           G  ++     A     E   +   P VV+ N+I++  CK    + A  +   M+K G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  +YN ++HG C +G  +EA+ F   M   GVEPD +TYS+L        +   A K+ 
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             +  +G  P+I TY  L+ GY   G + E   L ++M+  G   +   +S+L+ +    
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQ 384

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G++D+A+ +  +M   GL P+ VTY  +I  LCK  +V  A+  + +M  + +SP +  +
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
            +++ GLC       A      ++      + + +N +ID + K G + E+ +L+  ++ 
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
             + P+++T+N+LI G+C  GK+ +A +LL  +   GL+P+ VTY+T +N YC+   ++ 
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            L L +EME+  + P  +TY ++++GL +  +   A +L   +   G   +  TYN I+ 
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILH 624

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID---------------------GLCV 530
             CK K    A Q+   + L +L+  + T+NI+ID                     GL  
Sbjct: 625 GLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 684

Query: 531 N--------------GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           N              G L+  D L +S++++  ++       I++     G++ +A T+ 
Sbjct: 685 NYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 744

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNG 603
             + EK F  S+   T S F  +LS G
Sbjct: 745 SMIDEKHF--SLEASTASLFIDLLSGG 769



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/581 (24%), Positives = 266/581 (45%), Gaps = 23/581 (3%)

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG---LHPDAFSY 136
           +DA     E   +  G S+  LN  ++   +   A  A   +  M + G   + PD  +Y
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGADEVTPDLCTY 90

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
            ILI   C AG ++       ++ + G   DAI ++ L KG     + S A  ++ + + 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 197 K-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ---GFKLNVIAYSVLLSSMCKSG 252
           + G  P++ +Y +L+ G C     +E L+L  +M      G   +V++Y+ +++   K G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
             D+A    +EM   G+ PD+VTY+ +I  LCK   + KA+++ N M    + P+   + 
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           +IL G C      EA  +   +       DVV Y++++D   K G   EA +++  + ++
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            + P I T+ +L+ G+   G + +   LLD +  +G+ P    ++  + AY  +G + + 
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQA 390

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           + +  +M  + + P  VTY  VI  LCK  ++++A+   E M   G++P  I YN++I  
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            C C    +A +L+ +M    +   +  +N +ID  C  G +  ++ L   +    +   
Sbjct: 451 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFC 597
            + Y T+I  +C  G + +AM     MV  G + +   Y+                  F 
Sbjct: 511 VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
            M S+G  PD     ++L    Q     +  EL   + +SG
Sbjct: 571 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/496 (24%), Positives = 232/496 (46%), Gaps = 54/496 (10%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           PD+ TY +LI   C+ G ++ G      ++ +GF+++ IA++ LL  +C   R  +A+ +
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 261 -LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL------------------------ 295
            L  M  +G  P++ +Y+IL++GLC +++  +A++L                        
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 296 --------------YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
                         Y+EM  + I P+   + +I+  LC+ + + +A    ++++ +  + 
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D + YN ++ GY   G   EA+   +++    + P +VT++ L+   CKNG+  +AR++ 
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           D++   GL+P   TY T +  Y  +G +  +  LL  M    I P H  ++++I     Q
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQ 384

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            K+ +A+ +   M   G+ P+ +TY  +I   CK   +  A     QM    L P +  Y
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N LI GLC     + A+ L++ + +  I L  + + +II +HC EG V ++   F  MV 
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504

Query: 582 KGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGS 626
            G + ++  Y    + +C+             M+S G  P+      ++  + +   +  
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564

Query: 627 VFELAAVMIKSGLLPD 642
              L   M  SG+ PD
Sbjct: 565 ALVLFKEMESSGVSPD 580



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 196/405 (48%), Gaps = 6/405 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y+  G V  A+ V +KM++  L  +  TY +++  L    R  D M      I  
Sbjct: 376 ILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 435

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
             +P N+  NS+ I GLC  ++ + A   + E   +    + +  N+I+  +CK G    
Sbjct: 436 GLSPGNIVYNSL-IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           ++ LF LM++ G+ P+  +YN LI+G C+AG M+EA++  + M   G++P+ +TYS L  
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+  +S++  A  + +++   G  PDI+TY +++ G  Q        +L   +   G ++
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 614

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +  Y+++L  +CK+   D+AL +   +  + LK +  T++I+I  L K  +  +A  L+
Sbjct: 615 ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
               S  + PN + +  +   +  + ++ E    F S+  + C  D  + N ++   ++ 
Sbjct: 675 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 734

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           G I  A      + EK  S    T  SL       GK  +  R L
Sbjct: 735 GEITRAGTYLSMIDEKHFSLEAST-ASLFIDLLSGGKYQEYYRFL 778


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 160/568 (28%), Positives = 278/568 (48%), Gaps = 18/568 (3%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGK-EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           ++I     +  ++    FL E   K +FG ++ S   ++ +  K    ++A+ ++  ML 
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLN 195

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G+ P   ++N +I+ LC  G ++EA    + + R+   P+A TY+ L  G      +  
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A+ +  +++  G DP+ VTY+ LI G C  G +EE + + E M+ +G +  V  Y++ L 
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           S+C +G   EA+ LL +M+  G  P++ T++ LI GL +  K   AI LY++M +  + P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
            +  + A++  LC +     A   F  ++    +     YN +I  +  +G+I +A+ ++
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++++   SP+++T+N+LIYG+CK G + +A RLL+ +K +GL+P A TYT  ++ +   
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G ++   +L   M    I P HVTYT +I G     K+ +A+ L   M   G  P   TY
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTY 555

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           N +I  F K   + +A     +M    L P   TY   IDGLC NG    A  +   +++
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK 615

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTF--FCQMVEKGFEISIRDYT------------ 592
            N       Y+++I   C EG    A  +    ++   G E ++  YT            
Sbjct: 616 RNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675

Query: 593 ---KSFFCMMLSNGFPPDQEICEVMLIA 617
                    M   G  P +EI   +LI 
Sbjct: 676 YEADQLVVSMQKKGLQPSEEIYRALLIG 703



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 166/597 (27%), Positives = 279/597 (46%), Gaps = 46/597 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL------YNLRHTDIMWDLYDDIKVSETPR 61
           + G V +A  +++ +   D   +  TY SL+      +NL   D+ + ++D +       
Sbjct: 214 KKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNL---DLAFAMFDRMVKDGCDP 270

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSV-------VSL------------- 101
           N  T S +I+GLC + RL++A+  L+E   K   P+V       VSL             
Sbjct: 271 NSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELL 330

Query: 102 ---------------NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
                           A++S   + G  E+A GL+  ML  GL P   +YN LI+ LC+ 
Sbjct: 331 GKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVE 390

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G  E A      M  HG  P   TY+ + K F L+  I  A  +  K+L  GS P+++TY
Sbjct: 391 GRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITY 450

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             LI GYC+ GN+   ++L E+M   G K +   Y+ L+S   + G+++ A  L Y M  
Sbjct: 451 NTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMME 510

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G+ P+ VTY+ +I G     KV  A+ L+ +M      P+S  +  ++ G  +   I+E
Sbjct: 511 HGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISE 570

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A  +   ++    + +V+ Y   IDG  + G  G A +++ ++ ++   P++ T++SLIY
Sbjct: 571 AENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIY 630

Query: 387 GFCKNGKVADAR--RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           G C+ G+  DA    LL  +  +G EP+  TYTT +   C EG       L+  M+ K +
Sbjct: 631 GLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGL 690

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P+   Y  ++ G CK  K++ A+ +   M  +G       Y  +I + CK   + +A  
Sbjct: 691 QPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQC 750

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           +   M   +       + +L+DGL   G+      LL  ++  N +L    Y  + +
Sbjct: 751 IFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAR 807



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 159/622 (25%), Positives = 297/622 (47%), Gaps = 11/622 (1%)

Query: 26  DLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDA 82
           D   ++ ++ +LL  L      D+  D+Y  +  S    ++ T + +I+ LC++ R+Q+A
Sbjct: 162 DFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEA 221

Query: 83  ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
            L +      +  P+  +  +++  +C+    ++A  +F  M+K G  P++ +Y+ LI+G
Sbjct: 222 KLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLING 281

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           LC  G +EEA++   +M + G+EP   TY+I           S A +++ K+  +G  P+
Sbjct: 282 LCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPN 341

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           I T+T LI G  + G  E  + L   ML+ G     + Y+ L++ +C  GR + A  +  
Sbjct: 342 IQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFK 401

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
            M + G  P   TY+ +I+  C    + KA+ ++++M     SPN   +  ++ G C++ 
Sbjct: 402 WMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQG 461

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            +  A    + +  +    D   Y  +I G+ + G +  A  L+  ++E  ISP+ VT+ 
Sbjct: 462 NLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYT 521

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           ++I G+    KV DA  L   +   G  PS+ TY   ++ + +  +I        +M  +
Sbjct: 522 AIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQ 581

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P  +TYT  I GLC+  +   A ++  +M      P+  TY+++I   C+      A
Sbjct: 582 GLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641

Query: 503 --FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
             + LL ++  +  EP   TY  L+ GLC  G    AD L+VS+Q+  +  ++  Y  ++
Sbjct: 642 EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
              C    V  A+  F  M   GF++ + DY K+  C +    F  + +     ++  H 
Sbjct: 702 IGECKNLKVESALNIFYSMDTLGFQLHLSDY-KALICALCKENFIEEAQCIFQTMLEKHW 760

Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
             D     E+   ++  GLL +
Sbjct: 761 NSD-----EVVWTVLLDGLLKE 777



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 133/300 (44%), Gaps = 7/300 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYD----DIKVSETPR 61
           Y     V DA+ +  KM E     S QTYN ++     T+ + +  +     +K    P 
Sbjct: 527 YFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLP- 585

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK--G 119
           NV T +  IDGLC+  R   A     E   + + P++ + ++++   C+ G AE A+   
Sbjct: 586 NVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYN 645

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   +  YG  P+  +Y  L+ GLC  G   EA +    M + G++P    Y  L  G  
Sbjct: 646 LLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGEC 705

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A  +   +   G    +  Y  LIC  C+   +EE   + + ML + +  + +
Sbjct: 706 KNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEV 765

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            ++VLL  + K G  D  L LL+ ME+     +  TY +L R L   D   K  Q+  ++
Sbjct: 766 VWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIKIPQISQQL 825


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 166/610 (27%), Positives = 281/610 (46%), Gaps = 32/610 (5%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL+ D+  S    +V     ++  + +  R    I   Q+   K+    + S   ++  +
Sbjct: 65  DLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCF 124

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           C       A   F  + K GLHPD  ++N L+HGLC+   + EAL   + M      P+ 
Sbjct: 125 CSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 184

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LRE 227
           +T++ L  G     +I  A  ++ +++  G  P  +TY  ++ G C+ G+    L  LR+
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
           +        NV+ YS ++ S+CK GR  +A  L  EM+  G+ PDL TY+ +I G C   
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +   A QL  EM  ++ISP+   + A++    ++    EA   +D ++    I + + Y+
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            MIDG+ K   +  A  ++  +  K  SP+++TFN+LI G+C   ++ D   LL  +   
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET 424

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           GL     TY T ++ +   G++   L LLQEM +  + P  VT   ++ GLC   KL++A
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484

Query: 468 VQLLEDMY-----------VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           +++ + M              GV PD  TYN +I          +A +L  +M    + P
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            + TY+ +IDGLC    L  A  +  S+   + S   V +TT+I  +C  G V   +  F
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           C+M  +G   +   Y                      ++  F + G++    ++   MI 
Sbjct: 605 CEMGRRGIVANAITYI--------------------TLICGFRKVGNINGALDIFQEMIS 644

Query: 637 SGLLPDKFLI 646
           SG+ PD   I
Sbjct: 645 SGVYPDTITI 654



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 269/569 (47%), Gaps = 15/569 (2%)

Query: 37  LLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGP 96
           ++  +   D++  LY  ++  +   ++Y+ +I+I   C  S+L  A+    +       P
Sbjct: 88  VVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHP 147

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
            VV+ N ++   C       A  LF  M +    P+  ++  L++GLC  G + EA+   
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL-LIKGSDPDIVTYTVLICGYCQ 215
           + M   G++P  ITY  +  G         A  +++K+  +    P++V Y+ +I   C+
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCK 267

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G   +   L   M  +G   ++  Y+ ++   C SGR  +A  LL EM    + PD+VT
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI    K+ K  +A +LY+EM  + I PN+  + +++ G C++  +  A   F  + 
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C  +++ +N +IDGY     I + ++L  ++ E  +     T+N+LI+GF   G + 
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET-----------KAI 444
            A  LL  +   GL P  VT  T ++  C+ G ++  L + + M+              +
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P   TY ++I GL  + K  EA +L E+M   G+ PD ITY+++I   CK   L +A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           + + M   +  P   T+  LI+G C  G + +   L   +    I    + Y T+I    
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 565 AEGDVHKAMTFFCQMVEKGF---EISIRD 590
             G+++ A+  F +M+  G     I+IR+
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRN 656



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 264/547 (48%), Gaps = 50/547 (9%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVID 71
           A+    K+ +L L   + T+N+LL+ L   D +    +L+  +  +    NV T + +++
Sbjct: 133 ALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192

Query: 72  GLCQQSRLQDAILFL-----------QETAG-------------------------KEFG 95
           GLC++ R+ +A+  L           Q T G                             
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+VV  +AI+   CK G    A+ LF  M + G+ PD F+YN +I G C +G   +A + 
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M    + PD +TY+ L   F    +   A ++  ++L +G  P+ +TY+ +I G+C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              ++    +  +M ++G   N+I ++ L+   C + RID+ + LL+EM   GL  D  T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G      ++ A+ L  EM S  + P+      +L GLC+   + +A   F  + 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 336 MS----------NCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            S          N ++ DV  YNI+I G +  G   EA +LY ++  + I P  +T++S+
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G CK  ++ +A ++ D++      P+ VT+TT +N YC+ G +   L L  EM  + I
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
               +TY  +I G  K   +  A+ + ++M   GV PD IT   ++      ++L++A  
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA 672

Query: 505 LLNQMWL 511
           +L ++ +
Sbjct: 673 MLEKLQM 679



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 212/414 (51%), Gaps = 16/414 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
           + G   DA  +  +M+E  +   + TYNS++       R +D    L + ++   +P +V
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP-DV 325

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +I+   ++ +  +A     E   +   P+ ++ ++++  +CK    + A+ +F L
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G  P+  ++N LI G C A  +++ +E  ++M   G+  D  TY+ L  GF+L+  
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS-----------Q 232
           ++ A  ++Q+++  G  PDIVT   L+ G C  G +++ L++ +VM              
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G + +V  Y++L+S +   G+  EA  L  EM   G+ PD +TYS +I GLCKQ ++ +A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            Q+++ M SK  SPN      ++ G C+   + +    F  +     + + + Y  +I G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           + K+GNI  A+ +++++I   + P  +T  +++ G     ++  A  +L+ +++
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 176/383 (45%), Gaps = 53/383 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           +  +G   DA  ++ +M E  +   + TYN+L+         ++   LYD++       N
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T S +IDG C+Q+RL  A       A K   P++++ N ++  YC  G   +  G+  
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC--GAKRIDDGMEL 417

Query: 123 L--MLKYGLHPDAFSYNILIHG-----------------------------------LCI 145
           L  M + GL  D  +YN LIHG                                   LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 146 AGSMEEALEFTNDMGR-----------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
            G +++ALE    M +           +GVEPD  TY+IL  G     +   A ++ +++
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             +G  PD +TY+ +I G C+   ++E  ++ + M S+ F  NV+ ++ L++  CK+GR+
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D+ L L  EM   G+  + +TY  LI G  K   ++ A+ ++ EM S  + P++     +
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 315 LLGLCEKEMITEARMYFDSLIMS 337
           L GL  KE +  A    + L MS
Sbjct: 658 LTGLWSKEELKRAVAMLEKLQMS 680



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 128/292 (43%), Gaps = 21/292 (7%)

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G+ ++  + +A+ L+  ++  R  PS+V F  L+    +  +      L   ++   +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
              ++T  +  +C    +   L+   ++    + P  VT+  ++ GLC + ++ EA+ L 
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
             M+     P+ +T+ T++   C+   + +A  LL++M    L+PT  TY  ++DG+C  
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 532 GDLKNADCLLVSLQE-HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
           GD  +A  LL  ++E  +I    V Y+ II + C +G    A   F +M EKG       
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF----- 287

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                          PD      M++ F   G      +L   M++  + PD
Sbjct: 288 ---------------PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 158/575 (27%), Positives = 283/575 (49%), Gaps = 12/575 (2%)

Query: 19  IAKMKELDLKVSI-QTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
           IA+M   D  +S  +   S L +++  D + DL+ D+  S     V   S +   + +  
Sbjct: 142 IARMVANDRNLSYRERLRSGLVDIKADDAI-DLFRDMIHSRPLPTVIDFSRLFSAIAKTK 200

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK-----LGFAEVAKGLFCLMLKYGLHPD 132
           +    +   ++   K    ++ +L+ +++ +C+     L F+ + K     ++K G  P+
Sbjct: 201 QYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK-----IIKLGYEPN 255

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
             +++ LI+GLC+ G + EALE  + M   G +PD IT + L  G  L  + + A  +I 
Sbjct: 256 TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLID 315

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           K++  G  P+ VTY  ++   C+ G     ++L   M  +  KL+ + YS+++  +CK G
Sbjct: 316 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 375

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            +D A  L  EME  G+  +++TY+ILI G C   +     +L  +M  ++I+PN     
Sbjct: 376 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 435

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++    ++  + EA      +I      D + Y  +IDG+ K  ++ +A Q+   ++ K
Sbjct: 436 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 495

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P+I TFN LI G+CK  ++ D   L   + L G+    VTY T +  +CE G +   
Sbjct: 496 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 555

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             L QEM ++ + P  VTY +++ GLC   + ++A+++ E +    +  D   YN II  
Sbjct: 556 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 615

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            C    +  A+ L   + L  ++P   TYNI+I GLC  G L  A+ L   ++E   +  
Sbjct: 616 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 675

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
              Y  +I+AH  +GD  K++    ++   GF + 
Sbjct: 676 GWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 710



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 242/475 (50%), Gaps = 1/475 (0%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           IK+   P N  T S +I+GLC + R+ +A+  +         P ++++N +++  C  G 
Sbjct: 248 IKLGYEP-NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 306

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A  L   M++YG  P+A +Y  +++ +C +G    A+E    M    ++ DA+ YSI
Sbjct: 307 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 366

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +  G      +  A+ +  ++ +KG   +I+TY +LI G+C  G  ++G KL   M+ + 
Sbjct: 367 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 426

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              NV+ +SVL+ S  K G++ EA  L  EM   G+ PD +TY+ LI G CK++ + KA 
Sbjct: 427 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 486

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           Q+ + M SK   PN      ++ G C+   I +    F  + +   + D V YN +I G+
Sbjct: 487 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 546

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            +LG +  A +L+++++ +++ P+IVT+  L+ G C NG+   A  + + I+   +E   
Sbjct: 547 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 606

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
             Y   ++  C    +     L   +  K + P   TY ++I GLCK+  L EA  L   
Sbjct: 607 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 666

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           M   G  PD  TYN +IR+     D  K+ +L+ ++        ++T  ++ID L
Sbjct: 667 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 721



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 264/544 (48%), Gaps = 15/544 (2%)

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
           A+ A  LF  M+     P    ++ L   +      +  L     M   G+  +  T SI
Sbjct: 167 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 226

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +   F    ++  A+  + K++  G +P+ +T++ LI G C  G V E L+L + M+  G
Sbjct: 227 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 286

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            K ++I  + L++ +C SG+  EA+ L+ +M   G +P+ VTY  ++  +CK  +   A+
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           +L  +M  + I  ++  +  I+ GLC+   +  A   F+ + M     +++ YNI+I G+
Sbjct: 347 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 406

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
              G   +  +L R +I+++I+P++VTF+ LI  F K GK+ +A  L   +   G+ P  
Sbjct: 407 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 466

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           +TYT+ ++ +C+E ++ +   ++  M +K   P   T+ ++I G CK  ++ + ++L   
Sbjct: 467 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 526

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M + GV  D +TYNT+I+ FC+   L  A +L  +M    + P   TY IL+DGLC NG+
Sbjct: 527 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 586

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT- 592
            + A  +   +++  + L    Y  II   C    V  A   FC +  KG +  ++ Y  
Sbjct: 587 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 646

Query: 593 --------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
                         +  F  M  +G  PD     +++ A    GD     +L   + + G
Sbjct: 647 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 706

Query: 639 LLPD 642
              D
Sbjct: 707 FSVD 710


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/474 (31%), Positives = 248/474 (52%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  + +I+I  LC+  ++++A   L +   +   P VVS + ++  YC LG  + A  L 
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   GL P+ ++YN +I  LC  G   EA +   +M    + PD + Y+ L  GF  L
Sbjct: 317 DDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKL 376

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A K   ++L K   PD +TYT LI G+ Q G V E   L   M+S+G K + + Y
Sbjct: 377 GHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTY 436

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   CK+G +  A  L  EM  +G+ P++VTY  LI GLCK  ++  A +L +EM  
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K +  N   + +++ G+C+   I +A      + ++    D + Y  +ID Y +LG+I +
Sbjct: 497 KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDK 556

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +L ++++++ + P++VTFN L+ GFC  G + D  RLL  +   G+ P A+TY T M 
Sbjct: 557 AHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMK 616

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C   ++     + + M  + + P   TY ++IKG CK   L+EA  L ++M   G  P
Sbjct: 617 QHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVP 676

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
              +YN +I+ F K +   +A +L  +M  H L      YN  +D     GD++
Sbjct: 677 TVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVE 730



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 154/567 (27%), Positives = 279/567 (49%), Gaps = 17/567 (2%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           K +GP+ ++ +       ++G    A+ L   +L YGL     S N  +    IA + E 
Sbjct: 184 KYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSR--IANNSEG 241

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
                     +G+  +  +Y+I+      L ++  A +++ ++  + S PD+V+Y+ +I 
Sbjct: 242 IEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVID 301

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           GYC +G +++ LKL + M  +G K N   Y+ ++  +CK G+  EA  +L EM +  + P
Sbjct: 302 GYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIP 361

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D V Y+ LI G  K   V  A + ++EM SK+ISP+   +  ++ G  +   + E +  F
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             +I      D V Y  +ID Y K G +  A  L+ ++++  ++P+IVT+ +LI G CK+
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G++  A  LLD ++  GL+ +   Y + +N  C+ GNI++ + L++EME   I P  +TY
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITY 541

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           T VI   C+   + +A +LL++M   G+ P  +T+N ++  FC    L    +LL  M  
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             + P + TYN L+   C+   +     +   ++   ++     Y  +IK HC   ++ +
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKE 661

Query: 572 AMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLI 616
           A   + +M+EKG+  ++  Y                +  F  M  +G   D EI    + 
Sbjct: 662 AWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVD 721

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPDK 643
             ++ GD+     L    I+  LL ++
Sbjct: 722 MCYEEGDVEITLNLCDEAIEKCLLNER 748



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 212/437 (48%), Gaps = 5/437 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPR 61
           Y   G +  A+ ++  M+   LK +  TYNS++  L      ++    L + +     P 
Sbjct: 303 YCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPD 362

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   ++ I G  +   ++ A  +  E   K+  P  ++   ++  + + G     + LF
Sbjct: 363 NVVYTTL-IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  GL PD  +Y  LI   C AG M  A    N+M + G+ P+ +TY  L  G    
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A +++ ++  KG   ++  Y  ++ G C+ GN+E+ +KL + M   G   + I Y
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITY 541

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++ + C+ G ID+A  LL EM   GL+P +VT+++L+ G C    +    +L   M  
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K I P++  +  ++   C +  +      +  +       D   YNI+I G+ K  N+ E
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKE 661

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  LY+++IEK   P++ ++N+LI  F K  K  +AR L + ++ HGL      Y  F++
Sbjct: 662 AWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVD 721

Query: 422 AYCEEGNIQRLLALLQE 438
              EEG+++  L L  E
Sbjct: 722 MCYEEGDVEITLNLCDE 738


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 152/474 (32%), Positives = 249/474 (52%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  + +I+I  LC+  ++++A   L +   +   P VVS + ++  YC LG  + A  L 
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   GL P+ ++YN +I  LC  G   EA +   +M    + PD + Y+ L  GF  L
Sbjct: 317 DDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKL 376

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A K   ++L K   PD +TYT LI G+ Q G V E   L   M+S+G K + + Y
Sbjct: 377 GHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTY 436

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   CK+G +  A  L  EM  +G+ P++VTY  LI GLCK  ++  A +L +EM  
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K +  N   + +++ G+C+   I +A      + ++    D + Y  +ID Y +LG+I +
Sbjct: 497 KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDK 556

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +L ++++++ + P++VTFN L+ GFC  G + D  RLL  +   G+ P A+TY T M 
Sbjct: 557 AHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMK 616

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C   ++     + + M  + + P   TY ++IKG CK   L+EA  L ++M   G  P
Sbjct: 617 QHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVP 676

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
              +YN +I+ F K K + +A +L  +M  H L      YN  +D     GD++
Sbjct: 677 TVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVE 730



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 154/567 (27%), Positives = 279/567 (49%), Gaps = 17/567 (2%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           K +GP+ ++ +       ++G    A+ L   +L YGL     S N  +    IA + E 
Sbjct: 184 KYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSR--IANNSEG 241

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
                     +G+  +  +Y+I+      L ++  A +++ ++  + S PD+V+Y+ +I 
Sbjct: 242 IEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVID 301

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           GYC +G +++ LKL + M  +G K N   Y+ ++  +CK G+  EA  +L EM +  + P
Sbjct: 302 GYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIP 361

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D V Y+ LI G  K   V  A + ++EM SK+ISP+   +  ++ G  +   + E +  F
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             +I      D V Y  +ID Y K G +  A  L+ ++++  ++P+IVT+ +LI G CK+
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G++  A  LLD ++  GL+ +   Y + +N  C+ GNI++ + L++EME   I P  +TY
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITY 541

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           T VI   C+   + +A +LL++M   G+ P  +T+N ++  FC    L    +LL  M  
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             + P + TYN L+   C+   +     +   ++   ++     Y  +IK HC   ++ +
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKE 661

Query: 572 AMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLI 616
           A   + +M+EKG+  ++  Y                +  F  M  +G   D EI    + 
Sbjct: 662 AWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVD 721

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPDK 643
             ++ GD+     L    I+  LL ++
Sbjct: 722 MCYEEGDVEITLNLCDEAIEKCLLNER 748



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 213/437 (48%), Gaps = 5/437 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPR 61
           Y   G +  A+ ++  M+   LK +  TYNS++  L      ++    L + +     P 
Sbjct: 303 YCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPD 362

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   ++ I G  +   ++ A  +  E   K+  P  ++   ++  + + G     + LF
Sbjct: 363 NVVYTTL-IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  GL PD  +Y  LI   C AG M  A    N+M + G+ P+ +TY  L  G    
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A +++ ++  KG   ++  Y  ++ G C+ GN+E+ +KL + M   G   + I Y
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITY 541

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++ + C+ G ID+A  LL EM   GL+P +VT+++L+ G C    +    +L   M  
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K I P++  +  ++   C +  +      +  +       D   YNI+I G+ K  N+ E
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKE 661

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  LY+++IEK   P++ ++N+LI  F K  K+ +AR L + ++ HGL      Y  F++
Sbjct: 662 AWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVD 721

Query: 422 AYCEEGNIQRLLALLQE 438
              EEG+++  L L  E
Sbjct: 722 MCYEEGDVEITLNLCDE 738


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 158/603 (26%), Positives = 292/603 (48%), Gaps = 22/603 (3%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E P +VY  + +I  LC++ R  DA   L+          V + N +++ YC+ G  + A
Sbjct: 70  EAP-DVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAA 128

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   M    + PDA++Y  +I GLC  G + +AL   +DM + G +P  +TY++L + 
Sbjct: 129 RRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEA 185

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
               S    A  V+ ++  KG  P+IVTY V+I G C+ G V++  ++   + S GF+ +
Sbjct: 186 VCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPD 245

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +++Y+ +L  +C + R D+   L  EM      P+ VT+ +L+R  C+   V +AIQ+  
Sbjct: 246 IVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQ 305

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M     +PN+     ++  +C++  + +A  + +++ M  C  D + Y  ++ G  + G
Sbjct: 306 QMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAG 365

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
               A +L  +++ K   P+ VTFN+ I   C+ G +  A +L++ +  +G     VTY 
Sbjct: 366 RWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYN 425

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++ +C +G +   L L   +  +   P  +TYT ++ GLC   +L  A +LL  M   
Sbjct: 426 ALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAGMIQK 482

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
               + +T+N ++  FC+   + +A +L+NQM  H   P   T+N L+DG+  + + + A
Sbjct: 483 DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEA 542

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---- 593
             LL  L    +SL  + Y++++     E    +A+     + + G    +  Y K    
Sbjct: 543 LELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFA 602

Query: 594 -----------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                       FF  M+SNG  P++    +++      G L     + + +   G+L  
Sbjct: 603 LCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSK 662

Query: 643 KFL 645
             L
Sbjct: 663 SLL 665



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 230/456 (50%), Gaps = 6/456 (1%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  PD +    LI  LC  G   +A          G   D   Y+ L  G+    ++  A
Sbjct: 69  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAA 128

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++I  + +    PD  TYT +I G C  G V + L L + ML +G + +V+ Y+VLL +
Sbjct: 129 RRLIASMPVP---PDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEA 185

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CKS    EA+ +L EM A G  P++VTY+++I G+C++ +V  A ++ N + S    P+
Sbjct: 186 VCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPD 245

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
             ++  +L GLC      + ++ F  ++   C+ + V +++++  + + G +  A+Q+ +
Sbjct: 246 IVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQ 305

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           Q+ +   +P+    N +I   CK G+V DA   L+ + ++G  P  ++YTT +   C  G
Sbjct: 306 QMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAG 365

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
             +    LL EM  K   P  VT+   I  LC++  +++A++L+E M   G +   +TYN
Sbjct: 366 RWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYN 425

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++  FC    +  A +L N +     EP + TY  L+ GLC    L  A  LL  + + 
Sbjct: 426 ALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQK 482

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +  L  V +  ++   C +G V +AM    QM+E G
Sbjct: 483 DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG 518



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 152/570 (26%), Positives = 271/570 (47%), Gaps = 34/570 (5%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           R G   DA  V+   +     V +  YN+L+        +      I     P + YT +
Sbjct: 86  RRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYT 145

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL-GFAEVAKGLFCLMLK 126
            +I GLC + R+ DA+  L +   +   PSVV+   ++   CK  GF E A  +   M  
Sbjct: 146 PIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGE-AMNVLDEMRA 204

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  P+  +YN++I+G+C  G +++A E  N +  +G +PD ++Y+ + KG     +   
Sbjct: 205 KGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDD 264

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
              +  +++ K   P+ VT+ +L+  +C+ G VE  +++ + M   G   N    +++++
Sbjct: 265 VKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVIN 324

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           ++CK GR+D+A   L  M   G  PD ++Y+ ++RGLC+  +   A +L  EM  K   P
Sbjct: 325 AICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPP 384

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N       +  LC+K +I +A    + +    C   +V YN ++ G+   G +  A++L+
Sbjct: 385 NEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELF 444

Query: 367 RQL--------------------------------IEKRISPSIVTFNSLIYGFCKNGKV 394
             L                                I+K    + VTFN L+  FC+ G V
Sbjct: 445 NNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFV 504

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +A  L++ +  HG  P+ +T+ T ++   ++ N +  L LL  + +K +    +TY+ V
Sbjct: 505 EEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSV 564

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           +  L ++ + +EA+Q+L  +  +G+ P    YN I+ + CK  +  +A      M  +  
Sbjct: 565 VDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGC 624

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            P  +TY ILI+GL   G LK A  +L  L
Sbjct: 625 MPNESTYIILIEGLAHEGLLKEARYVLSEL 654



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/508 (24%), Positives = 243/508 (47%), Gaps = 41/508 (8%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTN 66
           G V DA+ ++  M +   + S+ TY  LL  +  +       ++ D+++      N+ T 
Sbjct: 155 GRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTY 214

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC--------KLGFAEVAK 118
           +++I+G+C++ R+ DA   L   +   F P +VS   ++   C        K+ FAE+  
Sbjct: 215 NVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVD 274

Query: 119 G--------------LFCL-------------MLKYGLHPDAFSYNILIHGLCIAGSMEE 151
                           FC              M ++G  P+    NI+I+ +C  G +++
Sbjct: 275 KKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDD 334

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A +F N+MG +G  PD I+Y+ + +G     +   A +++ +++ K   P+ VT+   IC
Sbjct: 335 AYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFIC 394

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
             CQ G +E+ +KL E+M   G  + ++ Y+ L+   C  GR+D AL L   +     +P
Sbjct: 395 ILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPC---EP 451

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           + +TY+ L+ GLC  +++  A +L   M  K    N+     ++   C+K  + EA    
Sbjct: 452 NTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELV 511

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           + ++   C  +++ +N ++DG  K  N  EA++L   L+ K +S   +T++S++    + 
Sbjct: 512 NQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRE 571

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
            +  +A ++L  ++  G+ P    Y   + A C+     + +     M +    P   TY
Sbjct: 572 DRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTY 631

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
            ++I+GL  +  L+EA  +L ++Y  GV
Sbjct: 632 IILIEGLAHEGLLKEARYVLSELYAKGV 659



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 218/476 (45%), Gaps = 15/476 (3%)

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           ++ A ++++    +G  PD+   T LI   C+ G   +  ++     + G  ++V AY+ 
Sbjct: 55  LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++  C+ GR+D A  L+  M    + PD  TY+ +IRGLC + +V  A+ L ++M  + 
Sbjct: 115 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+   +  +L  +C+     EA    D +    C  ++V YN++I+G  + G + +A 
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           ++  +L      P IV++ +++ G C   +  D + L   +      P+ VT+   +  +
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 291

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C  G ++R + +LQ+M      P      +VI  +CKQ ++ +A   L +M + G  PD 
Sbjct: 292 CRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDT 351

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           I+Y T++R  C+      A +LL +M   N  P   T+N  I  LC  G ++ A  L+  
Sbjct: 352 ISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIEL 411

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR------------DY 591
           + E+  S+  V Y  ++   C +G V  A+  F  +  +   I+              D 
Sbjct: 412 MPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDA 471

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                  M+    P +     V++  F Q G +    EL   M++ G  P+    N
Sbjct: 472 AAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFN 527



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 207/431 (48%), Gaps = 15/431 (3%)

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
           ++ E  +L E   S+G   +V   + L+ ++C+ GR  +A  +L   EA G   D+  Y+
Sbjct: 54  DLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYN 113

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            L+ G C+  ++  A +L   M    + P+++ +  I+ GLC++  + +A    D ++  
Sbjct: 114 TLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQR 170

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
            C   VV Y ++++   K    GEA+ +  ++  K  +P+IVT+N +I G C+ G+V DA
Sbjct: 171 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 230

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
           + +L+ +  +G +P  V+YTT +   C       +  L  EM  K   P  VT+ ++++ 
Sbjct: 231 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 290

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
            C+   ++ A+Q+L+ M   G TP+    N +I + CK   +  A+  LN M ++   P 
Sbjct: 291 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 350

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
           + +Y  ++ GLC  G  ++A  LL  +   N    +V + T I   C +G + +A+    
Sbjct: 351 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 410

Query: 578 QMVEKGFEISIRDYTK--SFFCMM--------LSNGFP--PDQEICEVMLIAFHQGGDLG 625
            M E G  + I  Y      FC+         L N  P  P+      +L        L 
Sbjct: 411 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLD 470

Query: 626 SVFELAAVMIK 636
           +  EL A MI+
Sbjct: 471 AAAELLAGMIQ 481



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 188/382 (49%), Gaps = 16/382 (4%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL--------RHTDIMWDLYD 52
           ML   + R GMV  A+ V+ +M +        T N+ L N+           D  +D  +
Sbjct: 286 MLVRFFCRGGMVERAIQVLQQMSQHGC-----TPNTTLCNIVINAICKQGRVDDAYDFLN 340

Query: 53  DIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
           ++ +     +  + + V+ GLC+  R + A   L E   K   P+ V+ N  +   C+ G
Sbjct: 341 NMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKG 400

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
             E A  L  LM +YG      +YN L+HG C+ G ++ ALE  N++     EP+ ITY+
Sbjct: 401 LIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYT 457

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  G     ++  A +++  ++ K    + VT+ VL+  +CQ G VEE ++L   M+  
Sbjct: 458 TLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEH 517

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   N+I ++ LL  + K    +EAL LL+ + + G+  D +TYS ++  L ++D+  +A
Sbjct: 518 GCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEA 577

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           IQ+ + +    + P    +  IL  LC++    +A  +F  ++ + C+ +   Y I+I+G
Sbjct: 578 IQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEG 637

Query: 353 YVKLGNIGEAVQLYRQLIEKRI 374
               G + EA  +  +L  K +
Sbjct: 638 LAHEGLLKEARYVLSELYAKGV 659



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 159/360 (44%), Gaps = 39/360 (10%)

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           +R L  +D + +A +L     S+  +P+ +    ++  LC +   ++A     +   S  
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             DV  YN ++ GY + G +  A +L   +    + P   T+  +I G C  G+V DA  
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALA 162

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           LLD +   G +PS VTYT  + A C+       + +L EM  K   P  VTY V+I G+C
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTI------------------------------ 489
           ++ ++ +A ++L  +   G  PD ++Y T+                              
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 282

Query: 490 -----IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
                +R FC+   + +A Q+L QM  H   P +   NI+I+ +C  G + +A   L ++
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
             +  +   ++YTT+++  C  G    A     +MV K    +   +  +F C++   G 
Sbjct: 343 GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTF-NTFICILCQKGL 401


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 255/465 (54%), Gaps = 3/465 (0%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           + ++I +  L +   L++ + FL+    +   P V++  +++  +C+ G  + A  +  +
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +   G  PD  +YN+LI G C +G +++ALE    + R  V PD +TY+ + +      +
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGK 223

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A +V+ + L +   PD++TYT+LI   C    V + +KL + M  +G K +V+ Y+V
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++ +CK GR+DEA+  L  M + G KP+++T++I++R +C   +   A +L ++M  K 
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            SP+      ++  LC K ++  A    + +    C+ + + YN ++ G+ +   +  A+
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +    ++ +   P IVT+N+L+   CK+GKV  A  +L+ +   G  P  +TY T ++  
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGL 463

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            + G  +  + LL+EM  K + P  +TY+ +++GL ++ K+ EA+++  DM  + + P  
Sbjct: 464 TKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSA 523

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +TYN I+   CK +   +A   L  M     +PT ATY ILI+G+
Sbjct: 524 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 238/451 (52%), Gaps = 5/451 (1%)

Query: 114 AEVAKGLFCL--MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
            E+ +GL  L  M+  G  PD  +   LI G C +G  ++A      +   G  PD ITY
Sbjct: 120 GELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITY 179

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           ++L  G+    +I  A +V++++ +    PD+VTY  ++   C  G ++E +++ +  L 
Sbjct: 180 NVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDSGKLKEAMEVLDRQLQ 236

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +    +VI Y++L+ + C    + +A+ LL EM   G KPD+VTY++LI G+CK+ ++ +
Sbjct: 237 RECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDE 296

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           AI+  N M S    PN   H  IL  +C      +A      ++   C   VV +NI+I+
Sbjct: 297 AIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILIN 356

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
              +   +G A+ +  ++ +    P+ +++N L++GFC+  K+  A   L+ +   G  P
Sbjct: 357 FLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 416

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
             VTY T + A C++G +   + +L ++ +K   P  +TY  VI GL K  K + AV+LL
Sbjct: 417 DIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELL 476

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
           E+M   G+ PD ITY+T++R   +   + +A ++ + M   +++P++ TYN ++ GLC  
Sbjct: 477 EEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKA 536

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
                A   L  + E     T+  YT +I+ 
Sbjct: 537 QQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 240/461 (52%), Gaps = 3/461 (0%)

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           + F+ NI +  L   G +EE L+F   M   G  PD I  + L +GF    +   A +++
Sbjct: 105 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIM 164

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           + L   G+ PD++TY VLI GYC+ G +++ L++ E M       +V+ Y+ +L S+C S
Sbjct: 165 EILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDS 221

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G++ EA+ +L         PD++TY+ILI   C    V +A++L +EM  K   P+   +
Sbjct: 222 GKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 281

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++ G+C++  + EA  + +++    C  +V+ +NI++      G   +A +L   ++ 
Sbjct: 282 NVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLR 341

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K  SPS+VTFN LI   C+   +  A  +L+ +  HG  P++++Y   ++ +C+E  + R
Sbjct: 342 KGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDR 401

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            +  L+ M ++   P  VTY  ++  LCK  K+  AV++L  +   G +P  ITYNT+I 
Sbjct: 402 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVID 461

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
              K      A +LL +M    L+P   TY+ L+ GL   G +  A  +   ++  +I  
Sbjct: 462 GLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKP 521

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           + V Y  I+   C      +A+ F   MVEKG + +   YT
Sbjct: 522 SAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYT 562



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 171/303 (56%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L D+++      +V T +++I+G+C++ RL +AI FL         P+V++ N I+   C
Sbjct: 265 LLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMC 324

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
             G    A+ L   ML+ G  P   ++NILI+ LC    +  A++    M +HG  P+++
Sbjct: 325 STGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSL 384

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+ L  GF    ++  A + ++ ++ +G  PDIVTY  L+   C+ G V+  +++   +
Sbjct: 385 SYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQL 444

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
            S+G    +I Y+ ++  + K G+ + A+ LL EM   GLKPD++TYS L+RGL ++ KV
Sbjct: 445 SSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKV 504

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +AI+++++M    I P++  + AI+LGLC+ +  + A  +   ++   C      Y I+
Sbjct: 505 DEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTIL 564

Query: 350 IDG 352
           I+G
Sbjct: 565 IEG 567



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 192/386 (49%), Gaps = 6/386 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRN 62
           Y ++G +  A+ V+ +M    +   + TYN++L +L  +  +    ++ D     E   +
Sbjct: 186 YCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPD 242

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T +I+I+  C  S +  A+  L E   K   P VV+ N +++  CK G  + A     
Sbjct: 243 VITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLN 302

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M  YG  P+  ++NI++  +C  G   +A    +DM R G  P  +T++IL        
Sbjct: 303 NMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKR 362

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A  V++K+   G  P+ ++Y  L+ G+CQ   ++  ++  E+M+S+G   +++ Y+
Sbjct: 363 LLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYN 422

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            LL+++CK G++D A+ +L ++ + G  P L+TY+ +I GL K  K   A++L  EM  K
Sbjct: 423 TLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRK 482

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   +  +L GL  +  + EA   F  +   +     V YN ++ G  K      A
Sbjct: 483 GLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRA 542

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGF 388
           +     ++EK   P+  T+  LI G 
Sbjct: 543 IDFLAYMVEKGCKPTEATYTILIEGI 568


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 159/577 (27%), Positives = 283/577 (49%), Gaps = 13/577 (2%)

Query: 32  QTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAG 91
           +   S L +++  D + DL+ D+  S     V   S +   + +  +    +   ++   
Sbjct: 58  ERLRSGLVDIKADDAI-DLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMEL 116

Query: 92  KEFGPSVVSLNAIMSRYCK-----LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           K    ++ +L+ +++ +C+     L F+ + K     ++K G  P+  +++ LI+GLC+ 
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK-----IIKLGYEPNTITFSTLINGLCLE 171

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G + EALE  + M   G +PD IT + L  G  L  + + A  +I K++  G  P+ VTY
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             ++   C+ G     ++L   M  +  KL+ + YS+++  +CK G +D A  L  EME 
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G+  +++TY+ILI G C   +     +L  +M  ++I+PN      ++    ++  + E
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A      +I      D + Y  +IDG+ K  ++ +A Q+   ++ K   P+I TFN LI 
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G+CK  ++ D   L   + L G+    VTY T +  +CE G +     L QEM ++ + P
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             VTY +++ GLC   + ++A+++ E +    +  D   YN II   C    +  A+ L 
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
             + L  ++P   TYNI+I GLC  G L  A+ L   ++E   +     Y  +I+AH  +
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 591

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           GD  K++    ++   GF  S+   T      MLS+G
Sbjct: 592 GDATKSVKLIEELKRCGF--SVDASTIKMVIDMLSDG 626



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 282/560 (50%), Gaps = 7/560 (1%)

Query: 8   RTGMVH----DAVFVIAKM---KELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           R+G+V     DA+ +   M   + L   +      S +   +  D++  L   +++    
Sbjct: 61  RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIA 120

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N+YT SI+I+  C+  +L  A   + +     + P+ ++ + +++  C  G    A  L
Sbjct: 121 HNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALEL 180

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M++ G  PD  + N L++GLC++G   EA+   + M  +G +P+A+TY  +      
Sbjct: 181 VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 240

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             Q + A ++++K+  +    D V Y+++I G C+ G+++    L   M  +G   N+I 
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y++L+   C +GR D+   LL +M    + P++VT+S+LI    K+ K+ +A +L+ EM 
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            + I+P++  + +++ G C++  + +A    D ++   C  ++  +NI+I+GY K   I 
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           + ++L+R++  + +    VT+N+LI GFC+ GK+  A+ L   +    + P+ VTY   +
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C+ G  ++ L + +++E   +      Y ++I G+C   K+ +A  L   + + GV 
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P   TYN +I   CK   L +A  L  +M      P   TYNILI     +GD   +  L
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600

Query: 541 LVSLQEHNISLTKVAYTTII 560
           +  L+    S+       +I
Sbjct: 601 IEELKRCGFSVDASTIKMVI 620



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 264/544 (48%), Gaps = 15/544 (2%)

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
           A+ A  LF  M+     P    ++ L   +      +  L     M   G+  +  T SI
Sbjct: 69  ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +   F    ++  A+  + K++  G +P+ +T++ LI G C  G V E L+L + M+  G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            K ++I  + L++ +C SG+  EA+ L+ +M   G +P+ VTY  ++  +CK  +   A+
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           +L  +M  + I  ++  +  I+ GLC+   +  A   F+ + M     +++ YNI+I G+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
              G   +  +L R +I+++I+P++VTF+ LI  F K GK+ +A  L   +   G+ P  
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           +TYT+ ++ +C+E ++ +   ++  M +K   P   T+ ++I G CK  ++ + ++L   
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M + GV  D +TYNT+I+ FC+   L  A +L  +M    + P   TY IL+DGLC NG+
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT- 592
            + A  +   +++  + L    Y  II   C    V  A   FC +  KG +  ++ Y  
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548

Query: 593 --------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
                         +  F  M  +G  PD     +++ A    GD     +L   + + G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608

Query: 639 LLPD 642
              D
Sbjct: 609 FSVD 612


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 160/568 (28%), Positives = 278/568 (48%), Gaps = 18/568 (3%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGK-EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           ++I     +  ++    FL E   K +FG ++ S   ++ +  K    ++A+ ++  ML 
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLN 195

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G+ P   ++N +I+ LC  G ++EA    + + R+   P+A TY+ L  G      +  
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A+ +  +++  G DP+ VTY+ LI G C  G +EE + + E M+ +G +  V  Y++ L 
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           S+C +G   EA+ LL +M+  G  P++ T++ LI GL +  K   AI LY++M +  + P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
            +  + A++  LC +     A   F  ++    +     YN +I  +  +G+I +A+ ++
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++++   SP+++T+N+LIYG+CK G + +A RLL+ +K +GL+P A TYT  ++ +   
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G ++   +L   M    I P HVTYT +I G     K+ +A+ L   M   G  P   TY
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTY 555

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           N +I  F K   + +A     +M    L P   TY   IDGLC NG    A  +   +++
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK 615

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTF--FCQMVEKGFEISIRDYT------------ 592
            N       Y+++I   C EG    A  +    ++   G E ++  YT            
Sbjct: 616 RNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675

Query: 593 ---KSFFCMMLSNGFPPDQEICEVMLIA 617
                    M   G  P +EI   +LI 
Sbjct: 676 YEADQLVVSMQKKGLQPSEEIYRALLIG 703



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 166/597 (27%), Positives = 279/597 (46%), Gaps = 46/597 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL------YNLRHTDIMWDLYDDIKVSETPR 61
           + G V +A  +++ +   D   +  TY SL+      +NL   D+ + ++D +       
Sbjct: 214 KKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNL---DLAFAMFDRMVKDGCDP 270

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSV-------VSL------------- 101
           N  T S +I+GLC + RL++A+  L+E   K   P+V       VSL             
Sbjct: 271 NSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELL 330

Query: 102 ---------------NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
                           A++S   + G  E+A GL+  ML  GL P   +YN LI+ LC+ 
Sbjct: 331 GKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVE 390

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G  E A      M  HG  P   TY+ + K F L+  I  A  +  K+L  GS P+++TY
Sbjct: 391 GRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITY 450

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             LI GYC+ GN+   ++L E+M   G K +   Y+ L+S   + G+++ A  L Y M  
Sbjct: 451 NTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMME 510

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G+ P+ VTY+ +I G     KV  A+ L+ +M      P+S  +  ++ G  +   I+E
Sbjct: 511 HGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISE 570

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A  +   ++    + +V+ Y   IDG  + G  G A +++ ++ ++   P++ T++SLIY
Sbjct: 571 AENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIY 630

Query: 387 GFCKNGKVADAR--RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           G C+ G+  DA    LL  +  +G EP+  TYTT +   C EG       L+  M+ K +
Sbjct: 631 GLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGL 690

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P+   Y  ++ G CK  K++ A+ +   M  +G       Y  +I + CK   + +A  
Sbjct: 691 QPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQC 750

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           +   M   +       + +L+DGL   G+      LL  ++  N +L    Y  + +
Sbjct: 751 IFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAR 807



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 160/622 (25%), Positives = 298/622 (47%), Gaps = 11/622 (1%)

Query: 26  DLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDA 82
           D   ++ ++ +LL  L      D+  D+Y  +  S    ++ T + +I+ LC++ R+Q+A
Sbjct: 162 DFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEA 221

Query: 83  ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
            L +      +  P+  +  +++  +C+    ++A  +F  M+K G  P++ +Y+ LI+G
Sbjct: 222 KLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLING 281

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           LC  G +EEA++   +M + G+EP   TY+I           S A +++ K+  +G  P+
Sbjct: 282 LCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPN 341

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           I T+T LI G  + G  E  + L   ML+ G     + Y+ L++ +C  GR + A  +  
Sbjct: 342 IQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFK 401

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
            M + G  P   TY+ +I+  C    + KA+ ++++M     SPN   +  ++ G C++ 
Sbjct: 402 WMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQG 461

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            +  A    + +  +    D   Y  +I G+ + G +  A  L+  ++E  ISP+ VT+ 
Sbjct: 462 NLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYT 521

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           ++I G+    KV DA  L   +   G  PS+ TY   ++ + +  +I        +M  +
Sbjct: 522 AIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQ 581

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P  +TYT  I GLC+  +   A ++  +M      P+  TY+++I   C+      A
Sbjct: 582 GLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641

Query: 503 --FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
             + LL ++  +  EP   TY  L+ GLC  G    AD L+VS+Q+  +  ++  Y  ++
Sbjct: 642 EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
              C    V  A+  F  M   GF++ + DY K+  C +    F  + +     ++  H 
Sbjct: 702 IGECKNLKVESALNIFYSMDTLGFQLHLSDY-KALICALCKENFIEEAQCIFQTMLEKHW 760

Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
             D     E+A  ++  GLL +
Sbjct: 761 NSD-----EVAWTVLLDGLLKE 777



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 134/300 (44%), Gaps = 7/300 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDD----IKVSETPR 61
           Y     V DA+ +  KM E     S QTYN ++     T+ + +  +     +K    P 
Sbjct: 527 YFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLP- 585

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK--G 119
           NV T +  IDGLC+  R   A     E   + + P++ + ++++   C+ G AE A+   
Sbjct: 586 NVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYN 645

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   +  YG  P+  +Y  L+ GLC  G   EA +    M + G++P    Y  L  G  
Sbjct: 646 LLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGEC 705

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A  +   +   G    +  Y  LIC  C+   +EE   + + ML + +  + +
Sbjct: 706 KNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEV 765

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           A++VLL  + K G  D  L LL+ ME+     +  TY +L R L   D   K  Q+  ++
Sbjct: 766 AWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIKIPQISQQL 825


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 148/524 (28%), Positives = 260/524 (49%), Gaps = 2/524 (0%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           + DA+            PS+V  + +++   ++        L+  M  +G+  + ++ NI
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI+  C    +  A     D+ + G +P   T++ L +G  +  +I  A ++  K+  +G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD++TY  LI G C++GN    ++    M  +  +  V+ YS ++ S+CK  ++ EAL
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L  +M A G+ P+  TYS LI GLC      +AI+L+  M  ++I P+      ++  L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++ M+ +A    D +I S+   DVV YN ++DG+     +G+ V ++  ++ K   PS+
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSV 334

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           +++ +LI G+CK   +  A  L + +   GL P  VTY T ++  C  G ++  +AL  E
Sbjct: 335 ISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHE 394

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M      P  VTY ++   LCK  +L EA+ LL+ +    + PD   Y+ ++   C+  +
Sbjct: 395 MVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGE 454

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L  A  L +++    L P   TY I+I+GLC  G L  A  L   + E+  S     Y  
Sbjct: 455 LEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNL 514

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
           I +      +  +A+  F +M+ +GF I +   T +    MLS+
Sbjct: 515 ITRGFLRNNETLRAIQLFQEMLSRGFSIDVS--TTTLLVEMLSD 556



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 257/521 (49%), Gaps = 15/521 (2%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           +A  S+   +   + A  LF  ML+    P    ++ L+  +         L     M  
Sbjct: 23  HAFHSKSLNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDS 82

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            G+  +  T +IL   F  L+++  A+ V+  +L  G  P   T+T LI G C  G + E
Sbjct: 83  FGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGE 142

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            L+L + M  +GF+ +V+ Y  L++ +CK G    A+  L  ME    +P +V YS +I 
Sbjct: 143 ALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIID 202

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
            LCK  ++ +A+ L+++M +K ISPN+F + +++ GLC      EA   F ++I    + 
Sbjct: 203 SLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMP 262

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D + +N ++D   K G + +A  +   +I+  + P +VT+NSL+ G C   ++     + 
Sbjct: 263 DQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVF 322

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           DT+   G  PS ++YTT +N YC+   + + + L +EM  + + P  VTY  +I GLC  
Sbjct: 323 DTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHV 382

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            +L++A+ L  +M V G  PD +TY  +    CK   L +A  LL  +   NL+P    Y
Sbjct: 383 GRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIY 442

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           +I++DG+C  G+L+ A  L   L    +      YT +I   C +G + +A   F +M E
Sbjct: 443 SIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 502

Query: 582 KG-------FEISIRDYTKS--------FFCMMLSNGFPPD 607
            G       + +  R + ++         F  MLS GF  D
Sbjct: 503 NGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSID 543



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 259/524 (49%), Gaps = 3/524 (0%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           + DA+ +  +M  +    SI  ++ LL +   ++H   +  LY  +     P N YT +I
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+  C  +RL  A   L +     + PS  +   ++   C  G    A  LF  M   G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  +Y  LI+GLC  G+   A+ F   M +    P  + YS +        Q++ A 
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            +   +L KG  P+  TY+ LI G C +G+ +E ++L   M+ +    + + ++ L+ ++
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK G + +A  ++  M    LKPD+VTY+ L+ G C + ++ K + +++ M  K   P+ 
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSV 334

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
            ++  ++ G C+ +++ +A   F+ +     I D V YN +I G   +G + +A+ L+ +
Sbjct: 335 ISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHE 394

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           ++     P +VT+  L    CKN ++A+A  LL  I+   L+P    Y+  M+  C  G 
Sbjct: 395 MVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGE 454

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           ++    L  ++ +K + P   TYT++I GLC+Q  L EA +L  +M   G +P+  TYN 
Sbjct: 455 LEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNL 514

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           I R F +  +  +A QL  +M         +T  +L++ L  +G
Sbjct: 515 ITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG 558



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 229/474 (48%), Gaps = 21/474 (4%)

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           I+++  +K  ++ + I  A  +  ++L     P IV ++ L+    ++ +    L L + 
Sbjct: 21  ISHAFHSKSLNV-NTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQ 79

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M S G   N    ++L++S C   R+  A  +L ++  +G +P   T++ LIRGLC + K
Sbjct: 80  MDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGK 139

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + +A+QL+++M  +   P+   +G ++ GLC+    + A  +  S+   NC   VV+Y+ 
Sbjct: 140 IGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYST 199

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +ID   K   + EA+ L+  ++ K ISP+  T++SLI+G C  G   +A RL   +    
Sbjct: 200 IIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 259

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P  +T+ T ++A C+EG + +   ++  M    + P  VTY  ++ G C + ++ + V
Sbjct: 260 IMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTV 319

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            + + M   G  P  I+Y T+I  +CK + + KA  L  +M    L P + TYN LI GL
Sbjct: 320 NVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGL 379

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C  G L++A  L   +  +      V Y  +    C    + +AM    +++E       
Sbjct: 380 CHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLL-KVIE------- 431

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                            PD  I  +++    + G+L +  +L + +   GL PD
Sbjct: 432 ------------GTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPD 473



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 148/301 (49%), Gaps = 38/301 (12%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + GMV  A +V+  M + DLK  + TYNSL+                             
Sbjct: 276 KEGMVVKAHYVVDVMIQSDLKPDVVTYNSLM----------------------------- 306

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
              DG C +S +   +        K   PSV+S   +++ YCK+   + A GLF  M + 
Sbjct: 307 ---DGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQ 363

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF---HLLSQI 184
           GL PD  +YN LIHGLC  G + +A+   ++M  +G  PD +TY IL       H L++ 
Sbjct: 364 GLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEA 423

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
               KVI+       DPDI  Y++++ G C+ G +E    L   + S+G   +V  Y+++
Sbjct: 424 MVLLKVIEG---TNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIM 480

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++ +C+ G + EA  L  EM+  G  P+  TY+++ RG  + ++  +AIQL+ EM S+  
Sbjct: 481 INGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGF 540

Query: 305 S 305
           S
Sbjct: 541 S 541


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 142/472 (30%), Positives = 260/472 (55%), Gaps = 1/472 (0%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           + ++ TP  ++    ++  L + +  Q AI   +E         +V+ N +++ + +LG 
Sbjct: 48  LNINPTPP-IFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGH 106

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              +  +F  +LK G  P+A +   LI GLC+ G + +AL F + +   G   + + Y  
Sbjct: 107 THFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGT 166

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L  G   + Q S A ++++++  K   P++V Y  +I   C++  V E   L   M+S+G
Sbjct: 167 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 226

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              +V+ YS L+S  C  G++++A+GL  +M +  + PD+ T+SIL+ G CK+ +V +A 
Sbjct: 227 ISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAK 286

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            +   M  + I P+   + +++ G C  + + +A+  F+++       +V  YNIMI+G+
Sbjct: 287 NVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGF 346

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K+  + EA+ L++++  K I P +VT+NSLI G CK+GK++ A +L+D +   G+    
Sbjct: 347 CKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDK 406

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           +TY + ++A C+   + + +ALL +M+ + I P   TYT++I GLCK  +L++A  + ED
Sbjct: 407 ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFED 466

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           + V G      TY  +I+ FC      KA  LL++M  +   P + TY I+I
Sbjct: 467 LLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIII 518



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 142/453 (31%), Positives = 244/453 (53%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P  F +  ++  L      + A+    +M  +G+  D +T++IL   F  L     ++ V
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              +L KG +P+ +T T LI G C  G + + L   + +++ GF LN + Y  L++ +CK
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G+   AL LL  ++   ++P++V Y+ +I  +CK   V++A  LY+EM SK ISP+   
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + A++ G C    + +A   F+ +I      DV  ++I++DG+ K G + EA  +   ++
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           ++ I P +VT+ SL+ G+C   +V  A+ + +T+   G+  +  +Y   +N +C+   + 
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             + L +EM  K I P  VTY  +I GLCK  K+  A++L+++M+  GV  D+ITYN+I+
Sbjct: 354 EAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSIL 413

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
            + CK   + KA  LL +M    ++P   TY ILIDGLC  G LK+A  +   L     +
Sbjct: 414 DALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYN 473

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +T   YT +I+  C      KA+    +M + G
Sbjct: 474 ITVYTYTVMIQGFCDNDLFDKALALLSKMEDNG 506



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 224/439 (51%)

Query: 41  LRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVS 100
           L HT   + ++ +I       N  T + +I GLC + ++  A+ F  +     F  + V 
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
              +++  CK+G    A  L   +    + P+   YN +I  +C    + EA +  ++M 
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
             G+ PD +TYS L  GF +L +++ A  +  K++ +  +PD+ T+++L+ G+C+ G V+
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
           E   +  +M+ QG K +V+ Y  L+   C   ++++A  +   M   G+  ++ +Y+I+I
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
            G CK  KV +A+ L+ EM  K I P+   + +++ GLC+   I+ A    D +      
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            D + YN ++D   K   + +A+ L  ++ ++ I P + T+  LI G CK G++ DA+ +
Sbjct: 404 HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNI 463

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            + + + G   +  TYT  +  +C+     + LALL +ME     P   TY ++I  L +
Sbjct: 464 FEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFE 523

Query: 461 QWKLQEAVQLLEDMYVIGV 479
           + +   A +LL +M   G+
Sbjct: 524 KDENDMAEKLLREMIARGL 542



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 201/403 (49%), Gaps = 3/403 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G +H A+    K+  L   ++   Y +L+  L     T     L   +       NV   
Sbjct: 140 GQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMY 199

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +ID +C+   + +A     E   K   P VV+ +A++S +C LG    A GLF  M+ 
Sbjct: 200 NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMIS 259

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             ++PD ++++IL+ G C  G ++EA      M + G++PD +TY  L  G+ L+ Q++ 
Sbjct: 260 EEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNK 319

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  +   +   G   ++ +Y ++I G+C+I  V+E + L + M  +    +V+ Y+ L+ 
Sbjct: 320 AKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLID 379

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CKSG+I  AL L+ EM   G+  D +TY+ ++  LCK  +V KAI L  +M  + I P
Sbjct: 380 GLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP 439

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           + + +  ++ GLC+   + +A+  F+ L++      V  Y +MI G+       +A+ L 
Sbjct: 440 DMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALL 499

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
            ++ +    P+  T+  +I    +  +   A +LL  +   GL
Sbjct: 500 SKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 156/329 (47%), Gaps = 6/329 (1%)

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
           QD  H  +  +N + +   +P  F  G IL  L +      A      +  +    D+V 
Sbjct: 34  QDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVT 93

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           +NI+I+ + +LG+   +  ++  +++K   P+ +T  +LI G C  G++  A    D + 
Sbjct: 94  FNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVV 153

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             G   + V Y T +N  C+ G     L LL+ ++ K + P  V Y  +I  +CK   + 
Sbjct: 154 ALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 213

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA  L  +M   G++PD +TY+ +I  FC    L  A  L N+M    + P   T++IL+
Sbjct: 214 EAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILV 273

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           DG C  G +K A  +L  + +  I    V Y +++  +C    V+KA + F  M + G  
Sbjct: 274 DGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVT 333

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
            +++ Y       ++ NGF   +++ E M
Sbjct: 334 ANVQSYN------IMINGFCKIKKVDEAM 356



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 121/280 (43%), Gaps = 20/280 (7%)

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           V  + +++    +P I  F  ++    K      A  L   ++ +G+    VT+   +N 
Sbjct: 41  VSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINC 100

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           + + G+     ++   +  K   P  +T T +IKGLC + ++ +A+   + +  +G   +
Sbjct: 101 FSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLN 160

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           ++ Y T+I   CK      A QLL ++    ++P    YN +ID +C    +  A  L  
Sbjct: 161 KVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYS 220

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
            +    IS   V Y+ +I   C  G ++ A+  F +M+ +  EI+               
Sbjct: 221 EMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISE--EIN--------------- 263

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              PD     +++  F + G +     + A+M+K G+ PD
Sbjct: 264 ---PDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPD 300



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 80/215 (37%), Gaps = 20/215 (9%)

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           Q  ++L +EME   I    VT+ ++I    +      +  +  ++   G  P+ IT  T+
Sbjct: 73  QTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTL 132

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I+  C    + +A    +++           Y  LI+GLC  G    A  LL  +    +
Sbjct: 133 IKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLV 192

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
               V Y TII + C    V++A   + +MV K                    G  PD  
Sbjct: 193 QPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK--------------------GISPDVV 232

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
               ++  F   G L     L   MI   + PD +
Sbjct: 233 TYSALISGFCILGKLNDAIGLFNKMISEEINPDVY 267


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 166/610 (27%), Positives = 281/610 (46%), Gaps = 32/610 (5%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL+ D+  S    +V     ++  + +  R    I   Q+   K+    + S   ++  +
Sbjct: 65  DLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCF 124

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           C       A   F  + K GLHPD  ++N L+HGLC+   + EAL   + M      P+ 
Sbjct: 125 CSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 184

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LRE 227
           +T++ L  G     +I  A  ++ +++  G  P  +TY  ++ G C+ G+    L  LR+
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
           +        NV+ YS ++ S+CK GR  +A  L  EM+  G+ PDL TY+ +I G C   
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +   A QL  EM  ++ISP+   + A++    ++    EA   +D ++    I + + Y+
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            MIDG+ K   +  A  ++  +  K  SP+++TFN+LI G+C   ++ D   LL  +   
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET 424

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           GL     TY T ++ +   G++   L LLQEM +  + P  VT   ++ GLC   KL++A
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484

Query: 468 VQLLEDMY-----------VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           +++ + M              GV PD  TYN +I          +A +L  +M    + P
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            + TY+ +IDGLC    L  A  +  S+   + S   V +TT+I  +C  G V   +  F
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           C+M  +G   +   Y                      ++  F + G++    ++   MI 
Sbjct: 605 CEMGRRGIVANAITYI--------------------TLICGFRKVGNINGALDIFQEMIS 644

Query: 637 SGLLPDKFLI 646
           SG+ PD   I
Sbjct: 645 SGVYPDTITI 654



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 269/569 (47%), Gaps = 15/569 (2%)

Query: 37  LLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGP 96
           ++  +   D++  LY  ++  +   ++Y+ +I+I   C  S+L  A+    +       P
Sbjct: 88  VVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHP 147

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
            VV+ N ++   C       A  LF  M +    P+  ++  L++GLC  G + EA+   
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL-LIKGSDPDIVTYTVLICGYCQ 215
           + M   G++P  ITY  +  G         A  +++K+  +    P++V Y+ +I   C+
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCK 267

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G   +   L   M  +G   ++  Y+ ++   C SGR  +A  LL EM    + PD+VT
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI    K+ K  +A +LY+EM  + I PN+  + +++ G C++  +  A   F  + 
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C  +++ +N +IDGY     I + ++L  ++ E  +     T+N+LI+GF   G + 
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET-----------KAI 444
            A  LL  +   GL P  VT  T ++  C+ G ++  L + + M+              +
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P   TY ++I GL  + K  EA +L E+M   G+ PD ITY+++I   CK   L +A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           + + M   +  P   T+  LI+G C  G + +   L   +    I    + Y T+I    
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 565 AEGDVHKAMTFFCQMVEKGF---EISIRD 590
             G+++ A+  F +M+  G     I+IR+
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRN 656



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 264/547 (48%), Gaps = 50/547 (9%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVID 71
           A+    K+ +L L   + T+N+LL+ L   D +    +L+  +  +    NV T + +++
Sbjct: 133 ALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192

Query: 72  GLCQQSRLQDAILFL-----------QETAG-------------------------KEFG 95
           GLC++ R+ +A+  L           Q T G                             
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+VV  +AI+   CK G    A+ LF  M + G+ PD F+YN +I G C +G   +A + 
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M    + PD +TY+ L   F    +   A ++  ++L +G  P+ +TY+ +I G+C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              ++    +  +M ++G   N+I ++ L+   C + RID+ + LL+EM   GL  D  T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G      ++ A+ L  EM S  + P+      +L GLC+   + +A   F  + 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 336 MS----------NCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            S          N ++ DV  YNI+I G +  G   EA +LY ++  + I P  +T++S+
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G CK  ++ +A ++ D++      P+ VT+TT +N YC+ G +   L L  EM  + I
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
               +TY  +I G  K   +  A+ + ++M   GV PD IT   ++      ++L++A  
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA 672

Query: 505 LLNQMWL 511
           +L ++ +
Sbjct: 673 MLEKLQM 679



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 212/414 (51%), Gaps = 16/414 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
           + G   DA  +  +M+E  +   + TYNS++       R +D    L + ++   +P +V
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP-DV 325

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +I+   ++ +  +A     E   +   P+ ++ ++++  +CK    + A+ +F L
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G  P+  ++N LI G C A  +++ +E  ++M   G+  D  TY+ L  GF+L+  
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS-----------Q 232
           ++ A  ++Q+++  G  PDIVT   L+ G C  G +++ L++ +VM              
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G + +V  Y++L+S +   G+  EA  L  EM   G+ PD +TYS +I GLCKQ ++ +A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            Q+++ M SK  SPN      ++ G C+   + +    F  +     + + + Y  +I G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           + K+GNI  A+ +++++I   + P  +T  +++ G     ++  A  +L+ +++
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 176/383 (45%), Gaps = 53/383 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           +  +G   DA  ++ +M E  +   + TYN+L+         ++   LYD++       N
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T S +IDG C+Q+RL  A       A K   P++++ N ++  YC  G   +  G+  
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC--GAKRIDDGMEL 417

Query: 123 L--MLKYGLHPDAFSYNILIHG-----------------------------------LCI 145
           L  M + GL  D  +YN LIHG                                   LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 146 AGSMEEALEFTNDMGR-----------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
            G +++ALE    M +           +GVEPD  TY+IL  G     +   A ++ +++
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             +G  PD +TY+ +I G C+   ++E  ++ + M S+ F  NV+ ++ L++  CK+GR+
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D+ L L  EM   G+  + +TY  LI G  K   ++ A+ ++ EM S  + P++     +
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 315 LLGLCEKEMITEARMYFDSLIMS 337
           L GL  KE +  A    + L MS
Sbjct: 658 LTGLWSKEELKRAVAMLEKLQMS 680



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 128/292 (43%), Gaps = 21/292 (7%)

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G+ ++  + +A+ L+  ++  R  PS+V F  L+    +  +      L   ++   +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
              ++T  +  +C    +   L+   ++    + P  VT+  ++ GLC + ++ EA+ L 
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
             M+     P+ +T+ T++   C+   + +A  LL++M    L+PT  TY  ++DG+C  
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 532 GDLKNADCLLVSLQE-HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
           GD  +A  LL  ++E  +I    V Y+ II + C +G    A   F +M EKG       
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF----- 287

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                          PD      M++ F   G      +L   M++  + PD
Sbjct: 288 ---------------PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 166/610 (27%), Positives = 281/610 (46%), Gaps = 32/610 (5%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL+ D+  S    +V     ++  + +  R    I   Q+   K+    + S N ++  +
Sbjct: 65  DLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCF 124

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           C       A   F  + K GLHPD  ++  L+HGLC+   + EAL   + M      P+ 
Sbjct: 125 CSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 184

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LRE 227
           +T++ L  G     +I  A  ++ +++  G  P  +TY  ++ G C+ G+    L  LR+
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
           +        NV+ YS ++ S+CK GR  +A  L  EM+  G+ PDL TY+ +I G C   
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +   A QL  EM  ++ISP+   + A++    ++    EA   +D ++    I + + Y+
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            MIDG+ K   +  A  ++  +  K  SP+++TFN+LI G+C   ++ D   LL  +   
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET 424

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           GL     TY T ++ +   G++   L LLQEM +  + P  VT   ++ GLC   KL++A
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484

Query: 468 VQLLEDMY-----------VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           +++ + M              GV PD  TYN +I          +A +L  +M    + P
Sbjct: 485 LEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 544

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            + TY+ +IDGLC    L  A  +  S+   + S   V +TT+I  +C  G V   +  F
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           C+M  +G   +   Y                      ++  F + G++    ++   MI 
Sbjct: 605 CEMGRRGIVANAITYI--------------------TLICGFRKVGNINGALDIFQEMIS 644

Query: 637 SGLLPDKFLI 646
           SG+ PD   I
Sbjct: 645 SGVYPDTITI 654



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 268/569 (47%), Gaps = 15/569 (2%)

Query: 37  LLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGP 96
           ++  +   D++  LY  ++  +   ++Y+ +I+I   C  S+L  A+    +       P
Sbjct: 88  VVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHP 147

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
            VV+   ++   C       A  LF  M +    P+  ++  L++GLC  G + EA+   
Sbjct: 148 DVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL-LIKGSDPDIVTYTVLICGYCQ 215
           + M   G++P  ITY  +  G         A  +++K+  +    P++V Y+ +I   C+
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCK 267

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G   +   L   M  +G   ++  Y+ ++   C SGR  +A  LL EM    + PD+VT
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI    K+ K  +A +LY+EM  + I PN+  + +++ G C++  +  A   F  + 
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C  +++ +N +IDGY     I + ++L  ++ E  +     T+N+LI+GF   G + 
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET-----------KAI 444
            A  LL  +   GL P  VT  T ++  C+ G ++  L + + M+              +
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P   TY ++I GL  + K  EA +L E+M   G+ PD ITY+++I   CK   L +A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           + + M   +  P   T+  LI+G C  G + +   L   +    I    + Y T+I    
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 565 AEGDVHKAMTFFCQMVEKGF---EISIRD 590
             G+++ A+  F +M+  G     I+IR+
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRN 656



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 257/515 (49%), Gaps = 15/515 (2%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMWD--LYDDIKVSETPRNVYTNSI 68
           V +A+ +  +M E   + ++ T+ +L+  L R   I+    L D +          T   
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 69  VIDGLCQQSRLQDAILFLQETAG-KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++DG+C++     A+  L++        P+VV  +AI+   CK G    A+ LF  M + 
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+ PD F+YN +I G C +G   +A +   +M    + PD +TY+ L   F    +   A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++  ++L +G  P+ +TY+ +I G+C+   ++    +  +M ++G   N+I ++ L+  
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            C + RID+ + LL+EM   GL  D  TY+ LI G      ++ A+ L  EM S  + P+
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMS----------NCIQ-DVVLYNIMIDGYVKL 356
                 +L GLC+   + +A   F  +  S          N ++ DV  YNI+I G +  
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   EA +LY ++  + I P  +T++S+I G CK  ++ +A ++ D++      P+ VT+
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           TT +N YC+ G +   L L  EM  + I    +TY  +I G  K   +  A+ + ++M  
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMIS 644

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            GV PD IT   ++      ++L++A  +L ++ +
Sbjct: 645 SGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/546 (25%), Positives = 260/546 (47%), Gaps = 15/546 (2%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVID 71
           A+    K+ +L L   + T+ +LL+ L   D +    +L+  +  +    NV T + +++
Sbjct: 133 ALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LH 130
           GLC++ R+ +A+  L         P+ ++   I+   CK G    A  L   M +   + 
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+   Y+ +I  LC  G   +A     +M   G+ PD  TY+ +  GF    + S A ++
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           +Q++L +   PD+VTY  LI  + + G   E  +L + ML +G   N I YS ++   CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             R+D A  + Y M   G  P+L+T++ LI G C   ++   ++L +EM    +  ++  
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G      +  A      +I S    D+V  + ++DG    G + +A+++++ + 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 371 EKR-----------ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           + +           + P + T+N LI G    GK  +A  L + +   G+ P  +TY++ 
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C++  +     +   M +K+  P  VT+T +I G CK  ++ + ++L  +M   G+
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             + ITY T+I  F K  ++  A  +  +M    + P + T   ++ GL    +LK A  
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVA 672

Query: 540 LLVSLQ 545
           +L  LQ
Sbjct: 673 MLEKLQ 678



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 212/414 (51%), Gaps = 16/414 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
           + G   DA  +  +M+E  +   + TYNS++       R +D    L + ++   +P +V
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP-DV 325

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +I+   ++ +  +A     E   +   P+ ++ ++++  +CK    + A+ +F L
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G  P+  ++N LI G C A  +++ +E  ++M   G+  D  TY+ L  GF+L+  
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS-----------Q 232
           ++ A  ++Q+++  G  PDIVT   L+ G C  G +++ L++ +VM              
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G + +V  Y++L+S +   G+  EA  L  EM   G+ PD +TYS +I GLCKQ ++ +A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            Q+++ M SK  SPN      ++ G C+   + +    F  +     + + + Y  +I G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           + K+GNI  A+ +++++I   + P  +T  +++ G     ++  A  +L+ +++
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 176/383 (45%), Gaps = 53/383 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           +  +G   DA  ++ +M E  +   + TYN+L+         ++   LYD++       N
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T S +IDG C+Q+RL  A       A K   P++++ N ++  YC  G   +  G+  
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC--GAKRIDDGMEL 417

Query: 123 L--MLKYGLHPDAFSYNILIHG-----------------------------------LCI 145
           L  M + GL  D  +YN LIHG                                   LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 146 AGSMEEALEFTNDMGR-----------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
            G +++ALE    M +           +GVEPD  TY+IL  G     +   A ++ +++
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             +G  PD +TY+ +I G C+   ++E  ++ + M S+ F  NV+ ++ L++  CK+GR+
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D+ L L  EM   G+  + +TY  LI G  K   ++ A+ ++ EM S  + P++     +
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 315 LLGLCEKEMITEARMYFDSLIMS 337
           L GL  KE +  A    + L MS
Sbjct: 658 LTGLWSKEELKRAVAMLEKLQMS 680



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 128/292 (43%), Gaps = 21/292 (7%)

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G+ ++  + +A+ L+  ++  R  PS+V F  L+    +  +      L   ++   +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
              ++   +  +C    +   L+   ++    + P  VT+T ++ GLC + ++ EA+ L 
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLF 172

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
             M+     P+ +T+ T++   C+   + +A  LL++M    L+PT  TY  ++DG+C  
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 532 GDLKNADCLLVSLQE-HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
           GD  +A  LL  ++E  +I    V Y+ II + C +G    A   F +M EKG       
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF----- 287

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                          PD      M++ F   G      +L   M++  + PD
Sbjct: 288 ---------------PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 259/521 (49%), Gaps = 5/521 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+V    +++   K+        L   M  +G+ P+ ++ NILI+  C    +  A   
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              + + G +PD  T++ L +G  +  +I  A  +  K++ +G  P++VTY  LI G C+
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +GN    ++L   M     + +V+ Y+ ++ S+CK  ++ EA  L  +M   G+ PD+ T
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ L+  LC   +      L N+M + +I P+      ++  LC++  +TEA    D +I
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 DVV Y  ++DG+     + EAV+++  ++ K  +P ++++ +LI G+CK  K+ 
Sbjct: 294 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 353

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L + +      P   TY T M+  C  G +Q  +AL  EM  +   P  VTY++++
Sbjct: 354 KAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 413

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             LCK   L+EA+ LL+ +    + PD   YN II   C+  +L  A  L + +    L 
Sbjct: 414 DSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLH 473

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P+  TYNI+I GLC  G L  A+ L + +  ++ S     Y TI +      +  +A+  
Sbjct: 474 PSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQL 533

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLS-NGFPPDQEICEVML 615
             +M+ +GF   +   T +    MLS +G   DQ  C +ML
Sbjct: 534 LEEMLARGFSADVS--TTTLLVEMLSDDGL--DQSSCFLML 570



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 260/532 (48%), Gaps = 4/532 (0%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DA+    ++  +    SI  +  LL +   ++H   +  L   +     P NVYT +I+I
Sbjct: 39  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 98

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +  C  +R+  A   L +       P   +   ++   C  G    A  LF  M+  G  
Sbjct: 99  NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 158

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  +Y  LI+GLC  G+   A+     M +   +PD + Y+ +        Q++ A+ +
Sbjct: 159 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 218

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
             +++ +G  PDI TYT L+   C +   +    L   M++     +V+ +S ++ ++CK
Sbjct: 219 FSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCK 278

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++ EA  ++  M   G++PD+VTY+ L+ G C Q ++ +A+++++ M  K  +P+  +
Sbjct: 279 EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 338

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C+   I +A   F+ +     I D   YN ++ G   +G + +A+ L+ +++
Sbjct: 339 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMV 398

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            +   P +VT++ L+   CKN  + +A  LL  I+   L P    Y   ++  C  G ++
Sbjct: 399 ARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELE 458

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L   + +K + P+  TY ++I GLCK+  L EA +L  +M     +PD  TYNTI 
Sbjct: 459 AARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIA 518

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           R F +  +  +A QLL +M         +T  +L++ L  +G L  + C L+
Sbjct: 519 RGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG-LDQSSCFLM 569



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 226/518 (43%), Gaps = 51/518 (9%)

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
           +K  H  + +  A     +LL     P IV +  L+    ++ +    L L   M S G 
Sbjct: 29  SKSLHF-NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGV 87

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             NV   ++L++S C   R+  A  +L ++  +G +PD  T++ LIRGLC + K+ +A+ 
Sbjct: 88  PPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALH 147

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L+++M  +   PN   +G ++ GLC+    + A     S+   NC  DVV+Y  +ID   
Sbjct: 148 LFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLC 207

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC------------------------- 389
           K   + EA  L+ Q++ + ISP I T+ SL++  C                         
Sbjct: 208 KDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVV 267

Query: 390 ----------KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
                     K GKV +A  ++D +   G+EP  VTYTT M+ +C +  +   + +   M
Sbjct: 268 IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 327

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
             K   P  ++YT +I G CK  K+ +A+ L E+M      PD  TYNT++   C    L
Sbjct: 328 VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRL 387

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
           + A  L ++M      P   TY+IL+D LC N  L+ A  LL +++  N++     Y  I
Sbjct: 388 QDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNII 447

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGF 604
           I   C  G++  A   F  +  KG   S+  Y                   F  M  N  
Sbjct: 448 IDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDC 507

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            PD      +   F Q  +     +L   M+  G   D
Sbjct: 508 SPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 545



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 3/208 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y +   +  A+++  +M   +     +TYN+L++ L H   + D   L+ ++       +
Sbjct: 346 YCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPD 405

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T SI++D LC+   L++A+  L+        P +   N I+   C+ G  E A+ LF 
Sbjct: 406 LVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFS 465

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   GLHP  ++YNI+IHGLC  G + EA +   +M  +   PD  TY+ +A+GF   +
Sbjct: 466 NLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNN 525

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           +   A ++++++L +G   D+ T T+L+
Sbjct: 526 ETLRAIQLLEEMLARGFSADVSTTTLLV 553


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 247/452 (54%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P++ +L+  M+ +C+L   ++   +   ++K GL P   ++  LI+GLC  G   +A+E 
Sbjct: 126 PNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVEL 185

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            +DM   G +PD  TY+ +  G   + + + A  +++K+   G  P++VTY+ LI   C+
Sbjct: 186 FDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCR 245

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              V E L +   M ++G   ++  Y+ L+  +CK  R  EA  LL EM ++ + PD+VT
Sbjct: 246 DRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVT 305

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           +++L+   CK+ KV +A+ +   M    + PN   + +++ G      + EAR  F  +I
Sbjct: 306 FNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMI 365

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C  ++  YNI+I+GY K   I EA+QL+ ++I + ++P+ V++N+LI+GFC+ GK+ 
Sbjct: 366 TKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLR 425

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A+ L   +  +G  P   TY+  ++ +C++G + +   L + M++  + P  V YT+++
Sbjct: 426 EAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILV 485

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             +CK    ++A +L  +++V G+ P    Y TII   CK   L +A +    M      
Sbjct: 486 HAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCP 545

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           P   +YN++I GL  + D   A  L+  +++ 
Sbjct: 546 PDEISYNVIIRGLLQHKDESRALLLVGEMRDR 577



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 148/468 (31%), Positives = 244/468 (52%)

Query: 42  RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSL 101
           ++ D++  L   +++     N+YT SI ++  CQ  R+      L +       P++V+ 
Sbjct: 107 QYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTF 166

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
             +++  CK+G    A  LF  M+  G  PD ++YN +I+GLC  G    A      M  
Sbjct: 167 TTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEE 226

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            G +P+ +TYS L         ++ A  +   +  KG  PDI TYT LI G C+    +E
Sbjct: 227 AGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKE 286

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
              L   M S     +++ ++VL+ + CK G++ EALG+L  M  +G++P++VTYS L+ 
Sbjct: 287 ASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMY 346

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           G      V +A +L++ M +K   PN F++  ++ G C+ + I EA   F+ +I      
Sbjct: 347 GYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTP 406

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           + V YN +I G+ +LG + EA  L+R +      P + T++ L+ GFCK G +  A RL 
Sbjct: 407 NNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLF 466

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             ++   L+P+ V YT  ++A C+ GN +    L  E+  + + P    YT +I GLCK+
Sbjct: 467 RAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKE 526

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
             L EA++   +M   G  PD+I+YN IIR   + KD  +A  L+ +M
Sbjct: 527 GLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEM 574



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 248/480 (51%), Gaps = 20/480 (4%)

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G+ P+  T SI    F  L ++   + V+ K++  G  P IVT+T LI G C++G   + 
Sbjct: 123 GLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQA 182

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           ++L + M+++G + +V  Y+ +++ +CK G    A GLL +ME  G +P++VTYS LI  
Sbjct: 183 VELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDS 242

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           LC+   V++A+ +++ M +K ISP+ F + +++ GLC+     EA    + +   N + D
Sbjct: 243 LCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPD 302

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           +V +N+++D + K G + EA+ + + + E  + P++VT++SL+YG+     V +AR+L  
Sbjct: 303 IVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFH 362

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G +P+  +Y   +N YC+   I   + L  EM  + + P +V+Y  +I G C+  
Sbjct: 363 VMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLG 422

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           KL+EA  L  +M   G  PD  TY+ ++  FCK   L KAF+L   M    L+P    Y 
Sbjct: 423 KLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYT 482

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           IL+  +C +G+ K+A  L   L    +      YTTII   C EG + +A+  F  M   
Sbjct: 483 ILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNME-- 540

Query: 583 GFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                             ++G PPD+    V++    Q  D      L   M   G + D
Sbjct: 541 ------------------ADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 144/480 (30%), Positives = 249/480 (51%), Gaps = 6/480 (1%)

Query: 8   RTGMVHDAVFVIAKMKEL-DLKVSIQT---YNSLLYNLRHTDIMWD-LYDDIKVSETPRN 62
           + G  +D V  ++K  EL  L  +I T   + +    L+  D+ +  L   IK+   P  
Sbjct: 104 KMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQP-T 162

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T + +I+GLC+      A+    +   K   P V + N I++  CK+G    A GL  
Sbjct: 163 IVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLK 222

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + G  P+  +Y+ LI  LC    + EAL+  + M   G+ PD  TY+ L +G    S
Sbjct: 223 KMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFS 282

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A  ++ ++      PDIVT+ VL+  +C+ G V E L + + M   G + NV+ YS
Sbjct: 283 RWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYS 342

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+        + EA  L + M   G KP++ +Y+ILI G CK  ++ +A+QL+NEM  +
Sbjct: 343 SLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQ 402

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            ++PN+ ++  ++ G C+   + EA+  F ++  +  + D+  Y+I++DG+ K G +G+A
Sbjct: 403 GLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKA 462

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +L+R +    + P++V +  L++  CK+G   DAR+L   + + GL+P    YTT +N 
Sbjct: 463 FRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIING 522

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+EG +   L   + ME     P  ++Y V+I+GL +      A+ L+ +M   G   D
Sbjct: 523 LCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 202/426 (47%), Gaps = 21/426 (4%)

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI-DEALGLLYEMEAVGLKPDLVTY 276
           N+++ L     ML +     +I ++ LLS++ K G+  D  + L  +ME VGL P++ T 
Sbjct: 72  NIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTL 131

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           SI +   C+  +V     +  ++    + P       ++ GLC+     +A   FD ++ 
Sbjct: 132 SIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVA 191

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
             C  DV  YN +I+G  K+G    A  L +++ E    P++VT+++LI   C++  V +
Sbjct: 192 KGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNE 251

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  +   +K  G+ P   TYT+ +   C+    +   ALL EM +  I P  VT+ V++ 
Sbjct: 252 ALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVD 311

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
             CK+ K+ EA+ +L+ M  +GV P+ +TY++++  +    D+ +A +L + M     +P
Sbjct: 312 TFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKP 371

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              +YNILI+G C    +  A  L   +    ++   V+Y T+I   C  G + +A   F
Sbjct: 372 NIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLF 431

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
             M                     +NG  PD     ++L  F + G LG  F L   M  
Sbjct: 432 RNMC--------------------TNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQS 471

Query: 637 SGLLPD 642
           + L P+
Sbjct: 472 TYLKPN 477



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 188/374 (50%), Gaps = 38/374 (10%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G    A  ++ KM+E   + ++ TY++L+ +L   R  +   D++  +K      +++
Sbjct: 210 KIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIF 269

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG------------ 112
           T + +I GLC+ SR ++A   L E       P +V+ N ++  +CK G            
Sbjct: 270 TYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTM 329

Query: 113 ---------------------FAEV--AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                                + +V  A+ LF +M+  G  P+ FSYNILI+G C A  +
Sbjct: 330 TEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRI 389

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +EA++  N+M   G+ P+ ++Y+ L  GF  L ++  A  + + +   G+ PD+ TY++L
Sbjct: 390 DEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSIL 449

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + G+C+ G + +  +L   M S   K N++ Y++L+ +MCKSG   +A  L  E+   GL
Sbjct: 450 LDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGL 509

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           +P +  Y+ +I GLCK+  + +A++ +  M +    P+  ++  I+ GL + +  + A +
Sbjct: 510 QPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALL 569

Query: 330 YFDSLIMSNCIQDV 343
               +     I DV
Sbjct: 570 LVGEMRDRGFIADV 583



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 139/276 (50%), Gaps = 3/276 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR-HTDIM--WDLYDDIKVS 57
           +L   + + G V +A+ V+  M E+ ++ ++ TY+SL+Y     TD++    L+  +   
Sbjct: 308 VLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITK 367

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               N+++ +I+I+G C+  R+ +A+    E   +   P+ VS N ++  +C+LG    A
Sbjct: 368 GCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREA 427

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + LF  M   G  PD F+Y+IL+ G C  G + +A      M    ++P+ + Y+IL   
Sbjct: 428 QDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHA 487

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                    A K+  +L ++G  P +  YT +I G C+ G ++E L+    M + G   +
Sbjct: 488 MCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPD 547

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
            I+Y+V++  + +      AL L+ EM   G   D+
Sbjct: 548 EISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 258/503 (51%), Gaps = 4/503 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T   +IDGL +Q R+++A    +E   K   P+VV+ N ++   CK G  E A  L+
Sbjct: 29  DVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLY 88

Query: 122 CLM-LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             M + +G  P   +Y+ LI GLC    +++  +   +M   G  P+A+TY+ L      
Sbjct: 89  DDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLG 148

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE--VMLSQGFKLNV 238
             +   A+ +++++   G  P+++T+ ++I G C+ G +E   ++ +   M+  G   +V
Sbjct: 149 QGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDV 208

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           I ++ +L  +CK  RI +A  +       G +P++VTYS LI GL K  K+ +A+QL  +
Sbjct: 209 ITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAK 268

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M       N+  +  ++ GL +   + +A +    +  + C+ D V YN +IDG+ K   
Sbjct: 269 MVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQR 328

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EAV L R+++E    PS+VT+ +L +G C++G+  +A  +LD +   G  P+A+TY++
Sbjct: 329 LREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSS 388

Query: 419 FMNAYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
            ++  C+ G +   L   ++M   + + P  + Y+ +I GLCK  K+ EA + LE M   
Sbjct: 389 IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRA 448

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G  PD +T++ +I   C    +    +L   M      P   TY  L+D LC    +  A
Sbjct: 449 GRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEA 508

Query: 538 DCLLVSLQEHNISLTKVAYTTII 560
             L   ++   +S  +    T+I
Sbjct: 509 FDLFQQMRSDGLSPDRSTRRTMI 531



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 252/520 (48%), Gaps = 4/520 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +IDGLC+  ++  AI   ++   K   P VV+  A++    K    + A  LF      G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH-GVEPDAITYSILAKGFHLLSQISGA 187
            HP   +YN +I GLC  G +E AL   +DM  H G  P  +TYS L  G     ++   
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            K+++++  +G  P+ VTY  L+      G  +E   L E M + G    +I + +++  
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 248 MCKSGRIDEALGLLYEMEAV--GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           +CK G I+ A  ++ EM  +  GL PD++T++ ++ GLCK+ ++  A  ++     +   
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN   +  ++ GL +   + EA      ++   C  + V Y+ ++DG +K+G + +AV +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
            RQ+ +    P  VT+N+LI GF K  ++ +A  LL  +   G  PS VTYTT  +  C 
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-VTPDQI 484
            G     + +L  M  +   P  +TY+ ++ GLCK  ++ EA+   E M     V P  I
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 420

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y+ +I   CK   + +A++ L +M      P   T++ILI+GLC  G +     L   +
Sbjct: 421 AYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGM 480

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            E       V Y T++   C    V +A   F QM   G 
Sbjct: 481 AERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGL 520



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 154/526 (29%), Positives = 258/526 (49%), Gaps = 19/526 (3%)

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK    + A  LF  M+   ++PD  +Y  LI GL     ++EA +   +    G  P  
Sbjct: 6   CKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTV 65

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIK-GSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
           +TY+ +  G     +I  A  +   + I  G  P +VTY+ LI G C+   V++G KL E
Sbjct: 66  VTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLE 125

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M  +G   N + Y+ L++++   GR  EA  LL +M A G  P+L+T+ ++I+GLCK+ 
Sbjct: 126 EMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEG 185

Query: 288 KVHKAIQLYNEM--CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
           ++  A ++ +EM      +SP+     ++L GLC+++ I +A   F   +   C  +VV 
Sbjct: 186 EIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVT 245

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y+ +IDG  K+  + EA+QL  +++E     + VT+++++ G  K G++ DA  +L  ++
Sbjct: 246 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 305

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             G  P AVTY T ++ + +   ++  + LL+EM      P+ VTYT +  GLC+  +  
Sbjct: 306 DAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFD 365

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL-EPTSATYNIL 524
           EAV++L+ M   G  P+ ITY++I+   CK   + +A     +M    +  P    Y+ L
Sbjct: 366 EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSAL 425

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           IDGLC  G +  A   L  +         V ++ +I   C  G +   +  F  M E+G 
Sbjct: 426 IDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGC 485

Query: 585 ---------------EISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
                            S  D     F  M S+G  PD+     M+
Sbjct: 486 VPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMI 531



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 233/486 (47%), Gaps = 42/486 (8%)

Query: 30  SIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR-NVYTNSIVIDGLCQQSRLQDAILF 85
           ++ TYN+++  L      +    LYDD+ +    R  V T S +IDGLC+   +      
Sbjct: 64  TVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKL 123

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
           L+E AG+   P+ V+ N +++     G ++ A  L   M   G  P+  ++ ++I GLC 
Sbjct: 124 LEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCK 183

Query: 146 AGSMEEALEFTNDMG--RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
            G +E A    ++M     G+ PD IT++ +  G     +I  A  V ++ L +G  P++
Sbjct: 184 EGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNV 243

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID-------- 255
           VTY+ LI G  ++  ++E L+L   M+  G + N + YS ++  + K GR++        
Sbjct: 244 VTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 303

Query: 256 ---------------------------EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
                                      EA+GLL EM   G  P +VTY+ L  GLC+  +
Sbjct: 304 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR 363

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD-VVLYN 347
             +A+++ + M ++  +PN+  + +I+ GLC+   +TEA  YF+ +     +   V+ Y+
Sbjct: 364 FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYS 423

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +IDG  K G I EA +   ++I     P +VTF+ LI G C  G++     L   +   
Sbjct: 424 ALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAER 483

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G  P  VTY T ++  C    +     L Q+M +  + P   T   +I GL +  + ++A
Sbjct: 484 GCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543

Query: 468 VQLLED 473
            ++ ++
Sbjct: 544 KRIQDE 549



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 230/482 (47%), Gaps = 25/482 (5%)

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A  + ++++ K   PD+VTY  LI G  +   V+E   L E   ++G    V+ Y+
Sbjct: 10  KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYN 69

Query: 243 VLLSSMCKSGRIDEALGLLYEMEA-VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            ++  +CK GRI+ AL L  +M    G +P +VTYS LI GLC+  +V K  +L  EM  
Sbjct: 70  TMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAG 129

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +  +PN+  +  ++  L  +    EA    + +  + C  +++ + ++I G  K G I  
Sbjct: 130 RGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEA 189

Query: 362 AVQLYRQL--IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           A ++  ++  IE  +SP ++TFNS++ G CK  ++ DA  +       G  P+ VTY+T 
Sbjct: 190 AFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTL 249

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++   +   +   L LL +M         VTY+ V+ GL K  ++++AV +L  M   G 
Sbjct: 250 IDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGC 309

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD +TYNT+I  F K + LR+A  LL +M      P+  TY  L  GLC +G    A  
Sbjct: 310 LPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVE 369

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE------------------ 581
           +L  +     +   + Y++I+   C  G V +A+ +F +M                    
Sbjct: 370 ILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGL 429

Query: 582 -KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
            K  +I   D    F   M+  G  PD     +++      G + +  EL   M + G +
Sbjct: 430 CKAGKI---DEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCV 486

Query: 641 PD 642
           PD
Sbjct: 487 PD 488



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 160/324 (49%), Gaps = 4/324 (1%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DA  V  +  E   + ++ TY++L   L  +   D    L   +       N  T S V+
Sbjct: 226 DAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVV 285

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           DGL +  R++DA++ L++       P  V+ N ++  + K      A GL   ML+ G H
Sbjct: 286 DGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFH 345

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P   +Y  L HGLC +G  +EA+E  + M   G  P+AITYS +  G     +++ A   
Sbjct: 346 PSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGY 405

Query: 191 IQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
            +K+       P ++ Y+ LI G C+ G ++E  +  E M+  G   +V+ +S+L++ +C
Sbjct: 406 FEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLC 465

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
            +GRID  L L   M   G  PD+VTY+ L+  LC+  +V +A  L+ +M S  +SP+  
Sbjct: 466 DAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRS 525

Query: 310 AHGAILLGLCEKEMITEARMYFDS 333
               ++ GL E     +A+   D 
Sbjct: 526 TRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 158/296 (53%), Gaps = 4/296 (1%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNV 63
           S+   + +A+ ++AKM EL  + +  TY++++  L     M D   +   ++ +    + 
Sbjct: 254 SKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDA 313

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +IDG  ++ RL++A+  L+E     F PSVV+   +    C+ G  + A  +   
Sbjct: 314 VTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDY 373

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV-EPDAITYSILAKGFHLLS 182
           M   G  P+A +Y+ ++ GLC AG + EAL +   M R  V  P  I YS L  G     
Sbjct: 374 MAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAG 433

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +I  A++ +++++  G  PD+VT+++LI G C  G ++ GL+L   M  +G   +++ Y+
Sbjct: 434 KIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYA 493

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
            L+  +C++ R+DEA  L  +M + GL PD  T   +I GL + ++   A ++ +E
Sbjct: 494 TLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 179/395 (45%), Gaps = 43/395 (10%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVS---ETPRNVYTNSI 68
           V D +F+I    E  L   + T+NS+L  L     + D ++  K +       NV T S 
Sbjct: 193 VVDEMFMI----ESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYST 248

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +IDGL + +++ +A+  L +        + V+ + ++    K+G  E A  +   M   G
Sbjct: 249 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 308

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PDA +YN LI G      + EA+    +M   G  P  +TY+ L  G     +   A 
Sbjct: 309 CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV 368

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML-SQGFKLNVIAYSVLLSS 247
           +++  +  +G  P+ +TY+ ++ G C+ G V E L   E M   +    +VIAYS L+  
Sbjct: 369 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 428

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK+G+IDEA   L  M   G  PD+VT+SILI GLC   ++   ++L+  M  +   P+
Sbjct: 429 LCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPD 488

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
                                              +V Y  ++D   +   + EA  L++
Sbjct: 489 -----------------------------------MVTYATLVDRLCRASRVDEAFDLFQ 513

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           Q+    +SP   T  ++I+G  +  +  DA+R+ D
Sbjct: 514 QMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQD 548



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 134/247 (54%), Gaps = 3/247 (1%)

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           MIDG  K   + +A+ L++Q+++K I P +VT+ +LI G  K  +V +A  L +  +  G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK-AIGPTHVTYTVVIKGLCKQWKLQEA 467
             P+ VTY T ++  C+ G I+  L L  +M       PT VTY+ +I GLC+  ++ + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            +LLE+M   G  P+ +TYNT++ +       ++AF LL QM  +   P   T+ ++I G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 528 LCVNGDLKNADCLL--VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           LC  G+++ A  ++  + + E  +S   + + +++   C E  +  A   F + +E+G  
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 586 ISIRDYT 592
            ++  Y+
Sbjct: 241 PNVVTYS 247


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 157/503 (31%), Positives = 254/503 (50%), Gaps = 43/503 (8%)

Query: 66  NSIVIDGL----CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +SIV D L    C+  R  DA         K   P + + NA++S + KL   E    L+
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M +  +    +++NI+I+ LC  G +++A +F   M   GV+P+              
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPN-------------- 270

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
                                +VTY  +I GYC  G VE    + ++M ++G + +   Y
Sbjct: 271 ---------------------VVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTY 309

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
             L+S MCK G+++EA G+L +M+ +GL P  VTY+ LI G C +  + KA    +EM  
Sbjct: 310 GSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVR 369

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + I P    +  ++  L  +  + EA      +  S  + D + YNI+I+GY + GN  +
Sbjct: 370 RAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKK 429

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+ ++I K I P++VT+ SLIY   K  ++  A  L + I   G  P  + +   ++
Sbjct: 430 AFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALID 489

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C  GN+ R  ALL+EM+ + I P  VTY  +++G C++ K++EA +LL++M   G+ P
Sbjct: 490 GHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRP 549

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN--GDLKNADC 539
           D I+YNT+I  + K  D+  AF + ++M      PT  TYN LI GLC N  GDL  A+ 
Sbjct: 550 DHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDL--AEE 607

Query: 540 LLVSLQEHNISLTKVAYTTIIKA 562
           LL  +    I+     Y ++I+ 
Sbjct: 608 LLKEMVSKGITPDDSTYFSLIEG 630



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 151/492 (30%), Positives = 247/492 (50%), Gaps = 38/492 (7%)

Query: 14  DAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DA      MKE  +   I+T+N   SL   L  T+ +W LY ++   +    VYT +I+I
Sbjct: 184 DAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMI 243

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           + LC++                                   G  + AK     M   G+ 
Sbjct: 244 NVLCKE-----------------------------------GKLKKAKDFIGSMENLGVK 268

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  +YN +IHG C  G +E A    + M   GVEPD+ TY  L  G     ++  A  +
Sbjct: 269 PNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGI 328

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++K+   G  P  VTY  LI GYC  G++ +    R+ M+ +     V  Y++L+ ++  
Sbjct: 329 LEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFL 388

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++DEA G++ +M   G+ PD +TY+ILI G C+     KA  L++EM SK I P    
Sbjct: 389 EGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVT 448

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + +++  L ++  +  A   F+ +I      D++++N +IDG+   GN+  A  L +++ 
Sbjct: 449 YTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMD 508

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           ++ I P  VT+N+L+ G C+ GKV +AR LL  +K  G+ P  ++Y T ++ Y + G+I 
Sbjct: 509 KRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDIN 568

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               +  EM +    PT +TY  +I+GLCK  +   A +LL++M   G+TPD  TY ++I
Sbjct: 569 DAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLI 628

Query: 491 RSFCKCKDLRKA 502
               K  D  +A
Sbjct: 629 EGIGKVDDSSEA 640



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 239/475 (50%), Gaps = 20/475 (4%)

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
           +I + +L +    L +   A++    +  KG  P I T+  ++  + ++   E    L  
Sbjct: 166 SIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYA 225

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M     K  V  ++++++ +CK G++ +A   +  ME +G+KP++VTY+ +I G C + 
Sbjct: 226 EMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRG 285

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +V  A  + + M ++ + P+S+ +G+++ G+C+   + EA    + +     +   V YN
Sbjct: 286 RVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYN 345

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +IDGY   G++ +A     +++ + I P++ T+N LI+     GK+ +A  ++  +   
Sbjct: 346 TLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS 405

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G+ P ++TY   +N YC  GN ++   L  EM +K I PT VTYT +I  L K+ +++ A
Sbjct: 406 GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
             L E +   G +PD I +N +I   C   +L +AF LL +M   N+ P   TYN L+ G
Sbjct: 466 DDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQG 525

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
            C  G ++ A  LL  ++   I    ++Y T+I  +   GD++ A T   +M+  GF  +
Sbjct: 526 RCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPT 585

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +  Y                Q +C+      +Q GDL    EL   M+  G+ PD
Sbjct: 586 LLTYNALI------------QGLCK------NQQGDLAE--ELLKEMVSKGITPD 620



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 166/344 (48%), Gaps = 15/344 (4%)

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           CE +   +A   FD +     +  +  +N M+  ++KL        LY ++   +I  ++
Sbjct: 177 CELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTV 236

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            TFN +I   CK GK+  A+  + +++  G++P+ VTY T ++ YC  G ++    +L  
Sbjct: 237 YTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDI 296

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M+ + + P   TY  +I G+CK  KL+EA  +LE M  IG+ P  +TYNT+I  +C   D
Sbjct: 297 MKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGD 356

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L KAF   ++M    + PT +TYN+LI  L + G +  AD ++  + +  I    + Y  
Sbjct: 357 LVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNI 416

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNG 603
           +I  +C  G+  KA     +M+ KG + ++  YT                  F  ++  G
Sbjct: 417 LINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREG 476

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             PD  +   ++      G+L   F L   M K  ++PD+   N
Sbjct: 477 ASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYN 520



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 169/355 (47%), Gaps = 32/355 (9%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + G + +A  ++ KMKE+ L  +  TYN+L                              
Sbjct: 318 KGGKLEEASGILEKMKEIGLLPTAVTYNTL------------------------------ 347

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
             IDG C +  L  A  +  E   +   P+V + N ++      G  + A G+   M   
Sbjct: 348 --IDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS 405

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+ PD+ +YNILI+G C  G+ ++A    ++M   G++P  +TY+ L       +++  A
Sbjct: 406 GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             + +K++ +G+ PD++ +  LI G+C  GN++    L + M  +    + + Y+ L+  
Sbjct: 466 DDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQG 525

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            C+ G+++EA  LL EM+  G++PD ++Y+ LI G  K+  ++ A  + +EM S   +P 
Sbjct: 526 RCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPT 585

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              + A++ GLC+ +    A      ++      D   Y  +I+G  K+ +  EA
Sbjct: 586 LLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 5/221 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDD-IKVSETPR 61
           Y R G    A  +  +M    ++ ++ TY SL+Y L   + M    DL++  I+   +P 
Sbjct: 421 YCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPD 480

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            +  N++ IDG C    L  A   L+E   +   P  V+ N +M   C+ G  E A+ L 
Sbjct: 481 LIMFNAL-IDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELL 539

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+ PD  SYN LI G    G + +A    ++M   G  P  +TY+ L +G    
Sbjct: 540 KEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKN 599

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
            Q   A +++++++ KG  PD  TY  LI G  ++ +  E 
Sbjct: 600 QQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 269/523 (51%), Gaps = 20/523 (3%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  +L+    P AF +N ++  L  +      L  +  M   G++P+ +  +IL  
Sbjct: 69  AVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILIN 128

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F  L  I  A+ V  K+L  G  PD +T+T L  G C  G +++     + +++ GF  
Sbjct: 129 CFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHF 188

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + I+Y  L+  +CK G    AL LL  ++   ++P++V Y+ +I  +CK   V++A  L+
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           +EM SK ISP+   + A++ G C    + +A   F+ +I+ N   DV  +NI+++ + K 
Sbjct: 249 SEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKD 308

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G + E   ++  ++++ I P+ VT+NSL+ G+C   +V  A+ + +T+   G+ P   +Y
Sbjct: 309 GKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSY 368

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           +  +N +C+       + L +EM  K I P  VTY+ +I GL K  ++  A+QL++ M+ 
Sbjct: 369 SIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHD 428

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            GV P+  TYN+I+ + CK   + KA  LL +      +P  +TY+ILI GLC +G L++
Sbjct: 429 RGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLED 488

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFF 596
           A  +   L     +L   AYT +I+  C EG  ++A+    +M +               
Sbjct: 489 ARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMED--------------- 533

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                NG  PD +  E+++++  +  +     +L   MI  GL
Sbjct: 534 -----NGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 147/512 (28%), Positives = 275/512 (53%), Gaps = 10/512 (1%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL-QETAGKEFGPSVVSLNAIMSRYCKLG 112
           ++ + TP     N I+  G   +S+    +L+L Q+   +   P++V+ N +++ +C+LG
Sbjct: 77  LRRNTTPPAFEFNKIL--GSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLG 134

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
               A  +F  +LK G  PD  ++  L  GLC+ G +++A  F + +   G   D I+Y 
Sbjct: 135 LIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYG 194

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  G   + +   A  ++Q++      P++V Y  +I   C++  V E   L   M+S+
Sbjct: 195 TLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSK 254

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   +V+ YS L+S  C  G++ +A+ L  +M    +KPD+ T++IL+   CK  K+ + 
Sbjct: 255 GISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
             +++ M  + I PN   + +++ G C  + + +A+  F+++       D+  Y+IMI+G
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           + K+    EA+ L++++  K I P +VT++SLI G  K+G+++ A +L+D +   G+ P+
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPN 434

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             TY + ++A C+   + + +ALL + + K   P   TY+++IKGLC+  KL++A ++ E
Sbjct: 435 ICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFE 494

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           D+ V G   D   Y  +I+ FC      +A  LL++M  +   P + TY I+I  L    
Sbjct: 495 DLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKD 554

Query: 533 DLKNADCLL-------VSLQEHNISLTKVAYT 557
           +   A+ LL       + L  +++ LT++A T
Sbjct: 555 ENDMAEKLLREMIARGLPLNFYDLYLTRLAQT 586



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 201/403 (49%), Gaps = 3/403 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G +  A     K+  L       +Y +L++ L     T    DL   +  +    NV   
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +ID +C+   + +A     E   K   P VV+ +A++S +C LG  + A  LF  M+ 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + PD +++NIL++  C  G M+E     + M + G++P+ +TY+ L  G+ L+ +++ 
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  +   +   G +PDI +Y+++I G+C+I   +E + L + M  +    +V+ YS L+ 
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            + KSGRI  AL L+ +M   G+ P++ TY+ ++  LCK  +V KAI L  +   K   P
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQP 468

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +  ++ GLC+   + +AR  F+ L++     DV  Y IMI G+   G   EA+ L 
Sbjct: 469 DISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALL 528

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
            ++ +    P   T+  +I    K  +   A +LL  +   GL
Sbjct: 529 SKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 200/450 (44%), Gaps = 18/450 (4%)

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
            S  + ++Y+     +    +V++ + L   +L +        ++ +L S+ KS      
Sbjct: 45  SSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTV 104

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L L  +ME  G+KP+LV  +ILI   C+   +  A  ++ ++      P++     +  G
Sbjct: 105 LYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKG 164

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC K  I +A ++ D ++      D + Y  +I G  K+G    A+ L +++    + P+
Sbjct: 165 LCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPN 224

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           +V +N++I   CK   V +A  L   +   G+ P  VTY+  ++ +C  G ++  + L  
Sbjct: 225 VVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFN 284

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           +M  + I P   T+ +++   CK  K++E   + + M   G+ P+ +TYN+++  +C  K
Sbjct: 285 KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK 344

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
           ++ KA  + N M    + P   +Y+I+I+G C       A  L   +   NI    V Y+
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSN 602
           ++I      G +  A+    QM ++G   +I  Y                 +        
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK 464

Query: 603 GFPPDQEICEVMLIAFHQGG---DLGSVFE 629
           GF PD     +++    Q G   D   VFE
Sbjct: 465 GFQPDISTYSILIKGLCQSGKLEDARKVFE 494



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 170/379 (44%), Gaps = 32/379 (8%)

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           K + ++YS         + V  A+ L+N +  +  +P +F    IL  L       +++ 
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSL------VKSKH 100

Query: 330 YFDSLIMSNCIQ------DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           Y   L +S  ++      ++V  NI+I+ + +LG I  A  ++ ++++    P  +TF +
Sbjct: 101 YHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTT 160

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L  G C  G++  A    D +   G     ++Y T ++  C+ G  +  L LLQ ++   
Sbjct: 161 LSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNL 220

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           + P  V Y  +I  +CK   + EA  L  +M   G++PD +TY+ +I  FC    L+ A 
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAI 280

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L N+M L N++P   T+NIL++  C +G +K    +   + +  I    V Y +++  +
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           C   +V+KA                    KS F  M   G  PD +   +M+  F +   
Sbjct: 341 CLVKEVNKA--------------------KSIFNTMAQGGVNPDIQSYSIMINGFCKIKK 380

Query: 624 LGSVFELAAVMIKSGLLPD 642
                 L   M +  ++PD
Sbjct: 381 FDEAMNLFKEMHRKNIIPD 399



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 109/271 (40%), Gaps = 20/271 (7%)

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           + ++++S    F  N  V DA  L + +      P A  +   + +  +  +   +L L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           Q+ME + I P  V   ++I   C+   +  A  +   +  +G  PD IT+ T+ +  C  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
             +++AF   +++          +Y  LI GLC  G+ + A  LL  +  + +    V Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
            TII + C    V++A   F +MV                    S G  PD      ++ 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMV--------------------SKGISPDVVTYSALIS 268

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            F   G L    +L   MI   + PD +  N
Sbjct: 269 GFCILGKLKDAIDLFNKMILENIKPDVYTFN 299


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 276/532 (51%), Gaps = 24/532 (4%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  +L+    P AF +N ++  L  +      L  +  M   G++P+ +  +IL  
Sbjct: 69  AVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILIN 128

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F  L  I  A+ V  K+L  G  PD +T+T LI G C  G +++     + +++ GF  
Sbjct: 129 CFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHF 188

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + I+Y  L+  +CK G    AL LL  ++   ++P++V Y+ +I  +CK   V++A  L+
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           +EM SK ISP+   + A++ G C    + +A   F+ +I+ N   DV  +NI+++ + K 
Sbjct: 249 SEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKD 308

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G + E   ++  ++++ I P+ VT+NSL+ G+C   +V  A+ + +T+   G+ P   +Y
Sbjct: 309 GKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSY 368

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           +  +N +C+       + L +EM  K I P  VTY+ +I GL K  ++  A+QL++ M+ 
Sbjct: 369 SIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHD 428

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            GV P   TYN+I+ + CK   + KA  LL ++    ++P   TY+ILI GLC +G L++
Sbjct: 429 RGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLED 488

Query: 537 ADCLLVSL--QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
           A  +   L  + HN+++    YT +I+  C EG  ++A+    +M +             
Sbjct: 489 ARKVFEGLLVKGHNLNVD--TYTIMIQGFCVEGLFNEALALLSKMED------------- 533

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
                  NG  PD +  E+++++  +  +     +L   MI  G+ P +  I
Sbjct: 534 -------NGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIAI 578



 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 273/503 (54%), Gaps = 3/503 (0%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL-QETAGKEFGPSVVSLNAIMSRYCKLG 112
           ++ + TP     N I+  G   +S+    +L+L Q+   +   P++V+ N +++ +C+LG
Sbjct: 77  LRRNTTPPAFEFNKIL--GSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLG 134

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
               A  +F  +LK G  PD  ++  LI GLC+ G +++A  F + +   G   D I+Y 
Sbjct: 135 LIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYG 194

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  G   + +   A  ++Q++      P++V Y  +I   C++  V E   L   M+S+
Sbjct: 195 TLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISK 254

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   +V+ YS L+S  C  G++++A+ L  +M    +KPD+ T++IL+   CK  K+ + 
Sbjct: 255 GISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
             +++ M  + I PN   + +++ G C  + + +A+  F+++       D+  Y+IMI+G
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           + K+    EA+ L++++  K I P +VT++SLI G  K+G+++ A +L+D +   G+ P+
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPT 434

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             TY + ++A C+   + + +ALL +++ K I P   TY+++IKGLC+  KL++A ++ E
Sbjct: 435 IRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFE 494

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            + V G   +  TY  +I+ FC      +A  LL++M  +   P + TY I+I  L    
Sbjct: 495 GLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKD 554

Query: 533 DLKNADCLLVSLQEHNISLTKVA 555
           +   A+ LL  +    +   ++A
Sbjct: 555 ENDMAEKLLREMIARGVRPRQIA 577



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 204/409 (49%), Gaps = 3/409 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G +  A     K+  L       +Y +L++ L     T    DL   +  +    NV   
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +ID +C+   + +A     E   K   P VV+ +A++S +C LG    A  LF  M+ 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + PD +++NIL++  C  G M+E     + M + G++P+ +TY+ L  G+ L+ +++ 
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  +   +   G +PDI +Y+++I G+C+I   +E + L + M  +    +V+ YS L+ 
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            + KSGRI  AL L+ +M   G+ P + TY+ ++  LCK  +V KAI L  ++  K I P
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQP 468

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N + +  ++ GLC+   + +AR  F+ L++     +V  Y IMI G+   G   EA+ L 
Sbjct: 469 NMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALL 528

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            ++ +    P   T+  +I    K  +   A +LL  +   G+ P  + 
Sbjct: 529 SKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 186/391 (47%)

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           + ++Y+     +    +V++ + L   +L +        ++ +L S+ KS      L L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            +ME  G+KP+LV  +ILI   C+   +  A  ++ ++      P++     ++ GLC K
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             I +A ++ D ++      D + Y  +I G  K+G    A+ L +++    + P++V +
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N++I   CK   V +A  L   +   G+ P  VTY+  ++ +C  G +   + L  +M  
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           + I P   T+ +++   CK  K++E   + + M   G+ P+ +TYN+++  +C  K++ K
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A  + N M    + P   +Y+I+I+G C       A  L   +   NI    V Y+++I 
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
                G +  A+    QM ++G   +IR Y 
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPTIRTYN 439



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 166/358 (46%)

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           K+N I+YS   ++   +  +D+A+ L   +      P    ++ ++  L K    H  + 
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L  +M  + I PN      ++   C+  +I  A   F  ++    + D + +  +I G  
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
             G I +A   + +++        +++ +LI+G CK G+   A  LL  +  + ++P+ V
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            Y T +++ C+   +     L  EM +K I P  VTY+ +I G C   KL +A+ L   M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
            +  + PD  T+N ++ +FCK   +++   + + M    ++P   TYN L+DG C+  ++
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             A  +  ++ +  ++    +Y+ +I   C      +AM  F +M  K     +  Y+
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 138/336 (41%), Gaps = 50/336 (14%)

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
            ++ +AV L+ +L+ +  +P    FN ++    K+        L   ++  G++P+ V  
Sbjct: 64  NDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNC 123

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              +N +C+ G I    ++  ++      P  +T+T +IKGLC + ++Q+A    + +  
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVA 183

Query: 477 IG-----------------------------------VTPDQITYNTIIRSFCKCKDLRK 501
           +G                                   V P+ + YNTII S CK K + +
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           AF L ++M    + P   TY+ LI G C+ G L +A  L   +   NI      +  ++ 
Sbjct: 244 AFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVN 303

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPP 606
           A C +G + +  T F  M+++G + +   Y                KS F  M   G  P
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           D +   +M+  F +         L   M +  ++PD
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 20/271 (7%)

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           + ++++S    F  N  V DA  L + +      P A  +   + +  +  +   +L L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           Q+ME + I P  V   ++I   C+   +  A  +   +  +G  PD IT+ T+I+  C  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
             +++AF   +++          +Y  LI GLC  G+ + A  LL  +  + +    V Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
            TII + C             ++V + F++         F  M+S G  PD      ++ 
Sbjct: 229 NTIIDSMCK-----------VKLVNEAFDL---------FSEMISKGISPDVVTYSALIS 268

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            F   G L    +L   MI   + PD +  N
Sbjct: 269 GFCILGKLNDAIDLFNKMILENIKPDVYTFN 299



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 38/198 (19%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNV 63
           S++G +  A+ ++ +M +  +  +I+TYNS+L  L      D    L   +K      N+
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNM 470

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           YT SI+I GLCQ  +L+DA                                +V +GL  L
Sbjct: 471 YTYSILIKGLCQSGKLEDA-------------------------------RKVFEGL--L 497

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +  + L+ D  +Y I+I G C+ G   EAL   + M  +G  PDA TY I+        +
Sbjct: 498 VKGHNLNVD--TYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDE 555

Query: 184 ISGAWKVIQKLLIKGSDP 201
              A K++++++ +G  P
Sbjct: 556 NDMAEKLLREMIARGVRP 573


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 180/665 (27%), Positives = 311/665 (46%), Gaps = 22/665 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +L  VY R GMV DA+     M       S+ T N LL  L   R    +W  + ++   
Sbjct: 103 LLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLAR 162

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +V T +I+I+ LC + +L+ A   L++     + PSVV+ N +++ YCK G  + A
Sbjct: 163 RVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAA 222

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M   G+  DA +YN+L+  LC      +       M +  + P+ ITY+ +  G
Sbjct: 223 LELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIING 282

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    +I  A ++ Q++ +    P+ VTY  LI G+C  GN E+ L + E+M + G K N
Sbjct: 283 FVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPN 342

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            ++YS LL+ +C+  + + +  +L  M   G+    + Y+ +I GLC+   ++++++L +
Sbjct: 343 EVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLD 402

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M    + P+      ++ G C    I   +     +  +    + ++Y  +I  Y K G
Sbjct: 403 KMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTG 462

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           ++ EA ++Y  +       +    N L+   CK+GKV  A      +   G  P+++T+ 
Sbjct: 463 DVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFD 522

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N Y   GN  +  ++  EM      P+H TY  ++K LC+  K +EA +LL+ ++ I
Sbjct: 523 CIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYI 582

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
               D +TYNTI+    K   L  A  L ++M   N+ P S TY I+  GL   G +  A
Sbjct: 583 PSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAA 642

Query: 538 DCLLVS-LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK--------GFEISI 588
                + L +  +S  KV YTT +      G   KA  +FC+ +EK           + +
Sbjct: 643 LHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQ-SKAALYFCEDMEKNGLCADLIATNVIL 701

Query: 589 RDYTK--------SFFCMMLSN-GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
             Y++          F MM S     P      ++L  + +  +L     L  +M+++G+
Sbjct: 702 NGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGI 761

Query: 640 LPDKF 644
            PDK 
Sbjct: 762 FPDKL 766



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 250/524 (47%), Gaps = 15/524 (2%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           +++LI      G + +ALE    MG  G  P   T ++L        ++   W   +++L
Sbjct: 101 FDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEML 160

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
            +   PD+ T+ +LI   C  G +++   L + M   G+  +V+ Y+ +L+  CK GR  
Sbjct: 161 ARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYK 220

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
            AL L+ +M + G++ D  TY++L+  LCK ++  K   L  +M  + ISPN   + +I+
Sbjct: 221 AALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSII 280

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            G  ++  I  A   F  + M N + + V YN +IDG+   GN  +A+ +   +      
Sbjct: 281 NGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPK 340

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+ V++++L+ G C++ K   ++ +L+ ++++G+    + YT  ++  C  G +   + L
Sbjct: 341 PNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKL 400

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           L +M    + P  VT++V+I G C+  K++   +++  MY  G+ P+ I Y T+I ++CK
Sbjct: 401 LDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCK 460

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
             D+ +AF++   M     +      N+L+  LC +G +  A+     + +       + 
Sbjct: 461 TGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSIT 520

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE--- 612
           +  II  +   G+  KA + F +M++ G   S   Y      +  +  F   + + +   
Sbjct: 521 FDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLH 580

Query: 613 ------------VMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                        +L+   + G L     L   M++  +LPD +
Sbjct: 581 YIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSY 624



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 147/598 (24%), Positives = 265/598 (44%), Gaps = 42/598 (7%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT-DIM--WDLYDDIKVSETPRN 62
            + R G + +   +I KM +  L  +   Y +L+YN   T D++  + +Y  +       N
Sbjct: 423  FCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDAN 482

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +  ++++  LC+  ++  A  F    +     P+ ++ + I++ Y   G    A  +F 
Sbjct: 483  CFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFD 542

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEA------------------------------ 152
             M+K G HP  F+Y  L+  LC AG  +EA                              
Sbjct: 543  EMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSG 602

Query: 153  -----LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTY 206
                 +   ++M +  V PD+ TY+I+  G     ++  A      LL KG+  P+ V Y
Sbjct: 603  MLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMY 662

Query: 207  TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-- 264
            T  + G  + G  +  L   E M   G   ++IA +V+L+   + G++ +A G ++ M  
Sbjct: 663  TTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKA-GDIFTMMW 721

Query: 265  EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              + + P L TY+IL+ G  K+  + K   LYN M    I P+     +++LG C+  M+
Sbjct: 722  SGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAML 781

Query: 325  TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
                     +++     D   +N++I  Y +   +G+A  L   +    I P + T +S+
Sbjct: 782  DVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSI 841

Query: 385  IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
            I    +   V ++  LL  +   G  P    Y   +N  C  G+I     L  EME   I
Sbjct: 842  ISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGI 901

Query: 445  GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
                V  + +++GL K  K++EA  +L+ M    + P   T+ T++  FC+ + L +A +
Sbjct: 902  SSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALK 961

Query: 505  LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            L + M   +++     YN+LI GLC +GD+ +A  L   +++  +      Y  +I A
Sbjct: 962  LKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDA 1019



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 189/423 (44%), Gaps = 15/423 (3%)

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           K N   + +L+    + G + +AL     M   G  P + T ++L+  L K+ KV     
Sbjct: 95  KSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWL 154

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
            + EM ++R+ P+      ++  LC +  + +A      +  S  +  VV YN +++ Y 
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K G    A++L  Q+  K I     T+N L+   CKN + A    LL  ++   + P+ +
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TY + +N + +EG I     + QEM    + P  VTY  +I G C     ++A+ +LE M
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G  P++++Y+ ++   C+      +  +L +M ++ +      Y  +IDGLC NG L
Sbjct: 335 EATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLL 394

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEIS 587
             +  LL  + +  +    V ++ +I   C  G +       C+M + G       +   
Sbjct: 395 NESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTL 454

Query: 588 IRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
           I +Y K+         +  M   G+  +  IC V++ +  + G +G        M K G 
Sbjct: 455 IYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGN 514

Query: 640 LPD 642
           +P+
Sbjct: 515 VPN 517



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 185/376 (49%), Gaps = 20/376 (5%)

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           K +   + +LIR   ++  V  A++ +  M  +  +P+ +    +L  L ++  +    +
Sbjct: 95  KSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWL 154

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
           +F  ++      DV  +NI+I+     G + +A  L +++ E    PS+VT+N+++  +C
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K G+   A  L+D +   G+E  A TY   ++  C+     +   LL++M  + I P  +
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY  +I G  K+ K+  A ++ ++M ++ + P+ +TYN +I   C   +  +A  +L  M
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
                +P   +Y+ L++GLC +   + +  +L  ++ + + +  +AYT +I   C  G +
Sbjct: 335 EATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLL 394

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
           ++++    ++++K                ML +G  PD     V++  F + G + +V E
Sbjct: 395 NESV----KLLDK----------------MLKDGVVPDVVTFSVLINGFCRVGKIKNVKE 434

Query: 630 LAAVMIKSGLLPDKFL 645
           +   M K+GL P+  +
Sbjct: 435 IICKMYKAGLAPNSII 450



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 223/479 (46%), Gaps = 8/479 (1%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
            R G   +A  ++ K+  +   V   TYN++L     + ++ D   L+D++       + Y
Sbjct: 565  RAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSY 624

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGK-EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T +I+  GL ++ ++  A+ F     GK    P  V     +    + G ++ A   FC 
Sbjct: 625  TYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAAL-YFCE 683

Query: 124  -MLKYGLHPDAFSYNILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLL 181
             M K GL  D  + N++++G    G M +A + FT       + P   TY+IL  G+   
Sbjct: 684  DMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKK 743

Query: 182  SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
              +S    +   ++  G  PD +T   LI G+C+   ++ GLKL + ML  G  ++   +
Sbjct: 744  KNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTF 803

Query: 242  SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            ++L+   C++  + +A  L+  M    + PD+ T+  +I  L +   V ++  L +EM  
Sbjct: 804  NMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLE 863

Query: 302  KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
            +   P+   + A++  +C    I  A    D +         V  + ++ G  K G + E
Sbjct: 864  RGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEE 923

Query: 362  AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            A  +   ++ K + P+I TF +L++ FC+N  + +A +L DT+    ++   + Y   ++
Sbjct: 924  AKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLIS 983

Query: 422  AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL-CKQWKLQEAVQLLEDMYVIGV 479
              C +G++   L L +E++ + + P   TY ++I  +      L +   LL+D+   GV
Sbjct: 984  GLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQERGV 1042


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 178/665 (26%), Positives = 312/665 (46%), Gaps = 23/665 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT--DI-MWDLYDDIKVS 57
           +L  VY R GM+ D++ +   M       S+ T N++L ++  +  D+ +W    ++   
Sbjct: 128 ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKR 187

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           +   +V T +I+I+ LC +   + +   +Q+     + P++V+ N ++  YCK G  + A
Sbjct: 188 KICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 247

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M   G++ D  +YN+LIH LC +    +      DM +  + P+ +TY+ L  G
Sbjct: 248 IELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNG 307

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    ++  A +++ ++L  G  P+ VT+  LI G+   GN +E LK+  +M ++G    
Sbjct: 308 FSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGT 367

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            ++Y VLL  +CK+   D A G    M+  G+    +TY+ +I GLCK   + +A+ + N
Sbjct: 368 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLN 427

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM    I P+   + A++ G C    +  A+     +       + ++Y+ +I    ++G
Sbjct: 428 EMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + E +++Y  +I +  +P   TFN L+   CK GKVA+A   +  +   G+ P+AV++ 
Sbjct: 488 CLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFD 547

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N Y   G   +  ++  EM      PT  TY  ++KGLCK   L  A + L+ +  +
Sbjct: 548 CLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNV 607

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
               D +  NT+I + CK  +L KA  L  +M   ++ P S TY  LI GLC  G  K  
Sbjct: 608 PAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKG--KTV 665

Query: 538 DCLLVSLQEH---NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR----- 589
             +L + +     N+   KV YT  +      G       F  QM + G    +      
Sbjct: 666 IAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAM 725

Query: 590 ----------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                     + T      M +    P+     ++L  + +   + + F L   MI SG+
Sbjct: 726 IDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGI 785

Query: 640 LPDKF 644
           LPDK 
Sbjct: 786 LPDKL 790



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 163/648 (25%), Positives = 291/648 (44%), Gaps = 59/648 (9%)

Query: 33  TYNSLLYNLRHTD---IMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN+LL    +     I   L +++       N  T + +IDG   +   ++A+      
Sbjct: 300 TYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMM 359

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             K    + VS   ++   CK    ++A+G +  M + G+     +Y  +I GLC  G +
Sbjct: 360 EAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +EA+   N+M + G++PD +TYS L  GF  + ++  A +++ ++   G  P+ + Y+ L
Sbjct: 420 DEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTL 479

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I   C++G ++E +++ E M+ +G   +   ++VL++S+CK+G++ EA   +  M + G+
Sbjct: 480 IYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P+ V++  LI G     +  KA  +++EM      P  F +G++L GLC+   +  A  
Sbjct: 540 LPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEK 599

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
           +  SL       D V+ N +I    K GN+ +AV L+ +++++ I P   T+ SLI G C
Sbjct: 600 FLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLC 659

Query: 390 KNGKVADARRLLDTIKLHG-LEPSAVTYTTF----------------------------- 419
           + GK   A       +  G L P+ V YT F                             
Sbjct: 660 RKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDV 719

Query: 420 ------MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
                 ++ Y   G I++   LL EM  +  GP   TY +++ G  K+  +  +  L   
Sbjct: 720 VTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRS 779

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M + G+ PD++T  +II   C+   L    ++L       +E    T+N+LI   C NG+
Sbjct: 780 MILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGE 839

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           +  A  ++  +    ISL K     I+          ++     +M ++G     R Y  
Sbjct: 840 INWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKY-- 897

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
               + L NG      +C V        GD+ + F +   MI   + P
Sbjct: 898 ----IGLLNG------LCRV--------GDIKTAFVVKEEMIAHKICP 927



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 255/540 (47%), Gaps = 20/540 (3%)

Query: 123 LMLKYGL---HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LM  Y L   +P  F  +ILI      G ++++LE    MG +G  P   T + +     
Sbjct: 112 LMATYRLCNSNPSVF--DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIV 169

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +    W  ++++L +   PD+ T+ +LI   C  G+ ++   L + M   G+   ++
Sbjct: 170 KSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIV 229

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ +L   CK GR   A+ LL  M   G+  D+ TY++LI  LC+ ++  K   L  +M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDM 289

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             + I PN   +  +L G   +  +  AR   + ++      + V +N +IDG++  GN 
Sbjct: 290 RKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNF 349

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA++++  +  K +  + V++  L+ G CKN +   AR     +K +G+    +TYT  
Sbjct: 350 KEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C+ G +   + +L EM    I P  VTY+ +I G C+  +L+ A +++  +Y +G+
Sbjct: 410 IDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGL 469

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +P+ I Y+T+I + C+   L++  ++   M L    P   T+N+L+  LC  G +  A+ 
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEE 529

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY-------- 591
            +  +    I    V++  +I  + + G+  KA + F +M + G   +   Y        
Sbjct: 530 FMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589

Query: 592 -------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                   + F   + +     D  +C  ++ A  + G+L     L   M++  +LPD F
Sbjct: 590 KGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSF 649



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/601 (22%), Positives = 261/601 (43%), Gaps = 39/601 (6%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
            + R G +  A  ++ ++  + L  +   Y++L+YN      + +   +Y+ + +     +
Sbjct: 448  FCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPD 507

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +T ++++  LC+  ++ +A  F++        P+ VS + +++ Y   G    A  +F 
Sbjct: 508  HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFD 567

Query: 123  LMLKYGLHPDAFSY-----------------------------------NILIHGLCIAG 147
             M K G HP  F+Y                                   N LI  +C +G
Sbjct: 568  EMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSG 627

Query: 148  SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTY 206
            ++++A+    +M +  + PD+ TY+ L  G     +   A    ++   +G+  P+ V Y
Sbjct: 628  NLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMY 687

Query: 207  TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            T  + G  + G  + G   R+ M   G   +V+  + ++    + G+I++   LL+EM  
Sbjct: 688  TCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGN 747

Query: 267  VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
                P+L TY+IL+ G  K+  V  +  LY  M    I P+     +I+LG+CE  M+  
Sbjct: 748  QNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEI 807

Query: 327  ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
                  + I      D   +N++I      G I  A  +   +    IS    T ++++ 
Sbjct: 808  GLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVS 867

Query: 387  GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
               +N +  ++R +L  +   G+ P +  Y   +N  C  G+I+    + +EM    I P
Sbjct: 868  VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICP 927

Query: 447  THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             +V  + +++ L K  K  EA  LL  M  + + P   ++ T++  FCK  ++ +A +L 
Sbjct: 928  PNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELR 987

Query: 507  NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
              M    L+    +YN+LI GLC  GD+  A  L   ++          Y  ++    ++
Sbjct: 988  VVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQ 1047

Query: 567  G 567
            G
Sbjct: 1048 G 1048



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 206/449 (45%), Gaps = 13/449 (2%)

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGK-EFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T + +I GLC++ +   AILF +E   +    P+ V     +    K G  +       
Sbjct: 649  FTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQ 708

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             M K GL  D  + N +I G    G +E+  +   +MG     P+  TY+IL  G+    
Sbjct: 709  QMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRK 768

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
             +S ++ + + +++ G  PD +T   +I G C+   +E GLK+ +  + +G +++   ++
Sbjct: 769  HVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFN 828

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +L+S  C +G I+ A  ++  M ++G+  D  T   ++  L +  +  ++  + +EM  +
Sbjct: 829  MLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQ 888

Query: 303  RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             ISP S  +  +L GLC    I  A +  + +I        V  + M+    K G   EA
Sbjct: 889  GISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948

Query: 363  VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
              L R +++ ++ P+I +F +L++ FCKNG V +A  L   +   GL+   V+Y   +  
Sbjct: 949  SLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITG 1008

Query: 423  YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ-LLEDMYVIGVT- 480
             C +G++     L +EM+         TY  ++ G+  Q         +L+D+   G   
Sbjct: 1009 LCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLARGFIT 1068

Query: 481  ----------PDQITYNTIIRSFCKCKDL 499
                      P QI+ N  ++    C  +
Sbjct: 1069 AMSFNHMINFPQQISVNAYLKHLFHCSTM 1097



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/360 (20%), Positives = 153/360 (42%), Gaps = 35/360 (9%)

Query: 61   RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            R+V T + +IDG  +  +++     L E   +  GP++ + N ++  Y K      +  L
Sbjct: 717  RDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFML 776

Query: 121  FCLMLKYGLHPD-------------------------AF----------SYNILIHGLCI 145
            +  M+  G+ PD                         AF          ++N+LI   C 
Sbjct: 777  YRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCA 836

Query: 146  AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
             G +  A +  N M   G+  D  T   +    +   +   +  V+ ++  +G  P+   
Sbjct: 837  NGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRK 896

Query: 206  YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
            Y  L+ G C++G+++    ++E M++       +A S ++ ++ K G+ DEA  LL  M 
Sbjct: 897  YIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSML 956

Query: 266  AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             + L P + +++ L+   CK   V +A++L   M +  +  +  ++  ++ GLC K  + 
Sbjct: 957  KMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1016

Query: 326  EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
             A   F+ +     + +V  Y  ++ G +  G       +  + +  R   + ++FN +I
Sbjct: 1017 IAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLARGFITAMSFNHMI 1076


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 157/527 (29%), Positives = 265/527 (50%), Gaps = 21/527 (3%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA-LEFTNDMGRHGVEPDAITYSILA 175
           A   F  ML     P    +N L+  +       +A +  +  M   G+ PD  T  +L 
Sbjct: 105 ALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLI 164

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
             F  L ++   + V+ K++  G    IVT+  LI G C++G   + ++L + M+++G++
Sbjct: 165 NCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQ 224

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +V  Y+ +++ +CK G    A GL  +M   G +PD+VTYS +I  LCK  +V++A+ +
Sbjct: 225 PDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 284

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           ++ M +K ISPN F + +++ GLC      EA    + ++  N + ++V ++++I+ + K
Sbjct: 285 FSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCK 344

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            GN+ EA  + + + E  + P++VT++SL+ G+    +V +AR+L D +   G +P   +
Sbjct: 345 EGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFS 404

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y   +N YC+   I     L  EM  + + P  V+Y  +I GLC+  +L+EA  L ++M 
Sbjct: 405 YNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNML 464

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G  PD  TY+ ++  FCK   L KAF+L   M    L+P    YNILID +C + +LK
Sbjct: 465 TNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLK 524

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF 595
            A  L   L    +      YTTII   C EG + +A+  F  M E              
Sbjct: 525 EARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEE-------------- 570

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                 +G PP++    V++  F Q  D     +L   M + G + D
Sbjct: 571 ------DGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVAD 611



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 141/481 (29%), Positives = 251/481 (52%), Gaps = 5/481 (1%)

Query: 69  VIDGLCQQSRLQDAILFLQ---ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           ++  + +     DA++ L    E AG    P   +L+ +++ + +L   ++   +   ++
Sbjct: 127 LLSAIVKMRHYHDAVISLSKQMELAG--LSPDTYTLHMLINCFFQLQRVDLGFSVLAKII 184

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K GL     ++N LI+GLC  G   +A+E  +DM   G +PD  TY+ +  G   + +  
Sbjct: 185 KLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETV 244

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  + +K+   G  PD+VTY+ +I   C+   V E L +   M ++G   N+  Y+ L+
Sbjct: 245 AAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLI 304

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +C   R  EA  +L EM ++ + P++VT+S+LI   CK+  V +A  +   M    + 
Sbjct: 305 QGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVE 364

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN   + +++ G   +  + EAR  FD +I   C  DV  YNI+I+GY K   IGEA QL
Sbjct: 365 PNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQL 424

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           + ++I + ++P IV++N+LI G C+ G++ +A  L   +  +G  P   TY+  ++ +C+
Sbjct: 425 FNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCK 484

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +G + +   L + M++  + P  V Y ++I  +CK   L+EA +L  +++V G+ P+   
Sbjct: 485 QGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQI 544

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           Y TII   CK   L +A +    M      P   +YN++I G   + D   A  L+  ++
Sbjct: 545 YTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMR 604

Query: 546 E 546
           E
Sbjct: 605 E 605



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 248/478 (51%), Gaps = 6/478 (1%)

Query: 13  HDAVFVIAKMKELDLKVSIQTYN-----SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           HDAV  ++K  EL   +S  TY      +  + L+  D+ + +   I        + T +
Sbjct: 138 HDAVISLSKQMEL-AGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFN 196

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
            +I+GLC+  +   A+    +   + + P V +   I++  CK+G    A GLF  M + 
Sbjct: 197 TLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEA 256

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  PD  +Y+ +I  LC    + EAL+  + M   G+ P+  TY+ L +G    S+   A
Sbjct: 257 GCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREA 316

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             ++ +++     P+IVT+++LI  +C+ GNV E   + + M   G + NV+ YS L++ 
Sbjct: 317 SAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG 376

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
                 + EA  L   M   G KPD+ +Y+ILI G CK  ++ +A QL+NEM  + ++P+
Sbjct: 377 YSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPD 436

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
             ++  ++ GLC+   + EA   F +++ +  + D+  Y+I++DG+ K G + +A +L+R
Sbjct: 437 IVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFR 496

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            +    + P++V +N LI   CK+  + +AR+L   + + GL+P+   YTT +N  C+EG
Sbjct: 497 AMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEG 556

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            +   L   + ME     P   +Y V+I+G  +      AVQL+ +M   G   D  T
Sbjct: 557 LLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 186/410 (45%), Gaps = 16/410 (3%)

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA-IQLYNEMCSKRISPNSFAHG 312
           ID+AL     M     +P ++ ++ L+  + K    H A I L  +M    +SP+++   
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++    + + +         +I       +V +N +I+G  K+G  G+AV+L+  ++ +
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P + T+ ++I G CK G+   A  L   +   G +P  VTY+T +++ C++  +   
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L +   M+ K I P   TY  +I+GLC   + +EA  +L +M  + + P+ +T++ +I  
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
           FCK  ++ +A  +L  M    +EP   TY+ L++G  +  ++  A  L   +        
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPD 401

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFC 597
             +Y  +I  +C    + +A   F +M+ +G    I  Y                   F 
Sbjct: 402 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 461

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            ML+NG  PD     ++L  F + G L   F L   M  + L P+  + N
Sbjct: 462 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYN 511


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 268/522 (51%), Gaps = 3/522 (0%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++IDG C+  ++ DA+  L E        ++   N++++ YCK G    A+G+   M+ +
Sbjct: 303 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 362

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            L PD++SYN L+ G C  G   EA    + M + G+EP  +TY+ L KG   +     A
Sbjct: 363 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 422

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++   ++ +G  PD V Y+ L+ G  ++ N E    L + +L++GF  + I ++ ++S 
Sbjct: 423 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 482

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK G++ EA  +  +M+ +G  PD +TY  LI G CK   V +A ++   M  + ISP+
Sbjct: 483 LCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPS 542

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              + +++ GL +   + E       + +     ++V Y  +IDG+ K G + +A   Y 
Sbjct: 543 IEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYF 602

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++ E  +S +I+  ++++ G  + G++ +A  L+  +  HG  P    +  F+ +     
Sbjct: 603 EMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECFLKSDIRYA 659

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            IQ++   L E     + P ++ Y + I GLCK  K+ +A +    + + G  PD  TY 
Sbjct: 660 AIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYC 719

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           T+I  +    ++ +AF+L ++M    L P   TYN LI+GLC + ++  A  L   L + 
Sbjct: 720 TLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 779

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            +    V Y T+I  +C  G++  A     +M+E+G   SI+
Sbjct: 780 GLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQ 821



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 174/654 (26%), Positives = 309/654 (47%), Gaps = 65/654 (9%)

Query: 45  DIMWD----LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGK-EFGPSVV 99
           +++WD    +Y +   S T  ++     V  GL + +      L++ +  GK    PS+ 
Sbjct: 105 NVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNA------LYVFDNMGKCGRIPSLR 158

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           S N++++   K G    A  ++  M++ G+ PD F  +I+++  C  G ++EA  F   M
Sbjct: 159 SCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKM 218

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              GVEP+ +TY  L  G+  L  +  A  V++ +  KG   ++VTYT+LI GYC+   +
Sbjct: 219 ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKM 278

Query: 220 EEGLK-LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           +E  K LR +        +  AY VL+   C++G+ID+A+ LL EM  +GLK +L   + 
Sbjct: 279 DEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNS 338

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           LI G CK+ ++H+A  +   M    + P+S+++  +L G C +   +EA    D ++   
Sbjct: 339 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 398

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP---------------------- 376
               V+ YN ++ G  ++G   +A+Q++  ++++ ++P                      
Sbjct: 399 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAS 458

Query: 377 -------------SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
                        S +TFN++I G CK GK+ +A  + D +K  G  P  +TY T ++ Y
Sbjct: 459 TLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 518

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+  N+ +   +   ME + I P+   Y  +I GL K  +L E   LL +M + G+TP+ 
Sbjct: 519 CKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNI 578

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TY  +I  +CK   L KAF    +M  + L       + ++ GL   G +  A+ L+  
Sbjct: 579 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 638

Query: 544 LQEHNISL-------TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR------- 589
           + +H           + + Y  I K   +  +  K       +V   + I+I        
Sbjct: 639 MVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIV---YNIAIAGLCKTGK 695

Query: 590 -DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            D  + FF M+   GF PD      ++  +   G++   F L   M++ GL+P+
Sbjct: 696 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 749



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 145/544 (26%), Positives = 251/544 (46%), Gaps = 64/544 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y RTG + DAV ++ +M  L LK ++   NSL                            
Sbjct: 308 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL---------------------------- 339

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
               I+G C++  + +A   +         P   S N ++  YC+ G    A  L   ML
Sbjct: 340 ----INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 395

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G+ P   +YN L+ GLC  G+ ++AL+  + M + GV PD + YS L  G   +    
Sbjct: 396 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFE 455

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
           GA  + + +L +G     +T+  +I G C++G + E  ++ + M   G   + I Y  L+
Sbjct: 456 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 515

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              CK+  + +A  +   ME   + P +  Y+ LI GL K  ++ +   L  EM  + ++
Sbjct: 516 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLT 575

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN   +GA++ G C++ M+ +A   +  +  +    ++++ + M+ G  +LG I EA  L
Sbjct: 576 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 635

Query: 366 YRQLIE--------------------KRIS------------PSIVTFNSLIYGFCKNGK 393
            +++++                    ++I+            P+ + +N  I G CK GK
Sbjct: 636 MQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGK 695

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V DARR    + L G  P   TY T ++ Y   GN+     L  EM  + + P  VTY  
Sbjct: 696 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 755

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I GLCK   +  A +L   ++  G+ P+ +TYNT+I  +CK  ++  AF+L ++M    
Sbjct: 756 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 815

Query: 514 LEPT 517
           + P+
Sbjct: 816 ISPS 819



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 191/413 (46%), Gaps = 37/413 (8%)

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           Q F+ NV +Y  L+  + +    DE    L ++       DL  +    RG    D++  
Sbjct: 62  QNFRPNVKSYCKLVHILSRGRMYDETRAYLNQL------VDLCKFKD--RGNVIWDEL-- 111

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
            + +Y E      SP  F    IL    EK +   A   FD++     I  +   N +++
Sbjct: 112 -VGVYREFA---FSPTVF--DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLN 165

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
             VK G    A  +Y+Q+I   I P +   + ++  FCK+GKV +A   +  ++  G+EP
Sbjct: 166 NLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEP 225

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + VTY + +N Y   G+++    +L+ M  K +    VTYT++IKG CKQ K+ EA ++L
Sbjct: 226 NIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVL 285

Query: 472 EDMY-VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
             M     + PD+  Y  +I  +C+   +  A +LL++M    L+      N LI+G C 
Sbjct: 286 RGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCK 345

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            G++  A+ ++  + + N+     +Y T++  +C EG   +A     +M+++G E ++  
Sbjct: 346 RGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLT 405

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           Y                + +C V        G      ++  +M+K G+ PD+
Sbjct: 406 YNTLL------------KGLCRV--------GAFDDALQIWHLMMKRGVAPDE 438



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/347 (22%), Positives = 143/347 (41%), Gaps = 37/347 (10%)

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +   PN  ++  ++  L    M  E R Y + L+     +D    N++ D         E
Sbjct: 62  QNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKD--RGNVIWD---------E 110

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            V +YR+      SP++  F+ ++  + + G   +A  + D +   G  PS  +  + +N
Sbjct: 111 LVGVYREFA---FSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLN 165

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
              + G       + Q+M    I P     ++++   CK  K+ EA   ++ M  +GV P
Sbjct: 166 NLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEP 225

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           + +TY+++I  +    D+  A  +L  M    +     TY +LI G C    +  A+ +L
Sbjct: 226 NIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVL 285

Query: 542 VSLQEHN-ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
             +QE   +   + AY  +I  +C  G +  A+    +M+  G +      T  F C  L
Sbjct: 286 RGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLK------TNLFICNSL 339

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            NG+    EI E       +G        +   M+   L PD +  N
Sbjct: 340 INGYCKRGEIHEA------EG--------VITRMVDWNLKPDSYSYN 372



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N+  N I I GLC+  ++ DA  F    + K F P   +   ++  Y   G  + A  
Sbjct: 678 PNNIVYN-IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFR 736

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   ML+ GL P+  +YN LI+GLC + +++ A    + + + G+ P+ +TY+ L  G+ 
Sbjct: 737 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYC 796

Query: 180 LLSQISGAWKVIQKLLIKGSDPDI 203
            +  +  A+K+  K++ +G  P I
Sbjct: 797 KIGNMDAAFKLKDKMIEEGISPSI 820


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 133/414 (32%), Positives = 230/414 (55%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M K GL P   ++N L+ GLC    + +A++  ++M + G EPD ITYS +  G   +  
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
            + A ++++K+  KG  P++V Y  +I   C+   V E +     M+ +G   +V  YS 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +L   C  GR++EA  L  +M    + P+ VT++ILI GLCK+  + +A  ++  M  K 
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P+ + + A++ G C +  + EA+  F+ +    C  +V  YNI+I+G+ K G I EA 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L  ++  K ++P I T+++L+ GFC+ G+  +A+ LL  +  +GL P+ +TY+  ++  
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ G++     LL+ M+   I P    YT++I+G+C   KL+ A +L  +++V G+ P  
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           +TY  +I    K     +A +L  +M ++   P S TYN++I G   NGD  NA
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNA 414



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/437 (32%), Positives = 230/437 (52%), Gaps = 5/437 (1%)

Query: 22  MKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDD-IKVSETPRNVYTNSIVIDGLCQQS 77
           M +L L+ ++ T+N+LL  L     + D   L+D+ +K+   P +V T S +I+GLC+  
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEP-DVITYSTIINGLCKMG 59

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
               A+  L++   K   P+VV+ N I+   CK      A   F  M+K G+ PD F+Y+
Sbjct: 60  NTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYS 119

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
            ++HG C  G + EA      M    V P+ +T++IL  G      IS AW V + +  K
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G +PD+ TY  L+ GYC    ++E  KL  +M  +G   NV +Y++L++  CKSGRIDEA
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
            GLL EM    L PD+ TYS L+RG C+  +  +A +L  EMCS  + PN   +  +L G
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC+   + EA     ++  S    ++ +Y I+I+G    G +  A +L+  L  K I P+
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPT 359

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           +VT+  +I G  K G   +A  L   + ++G  P++ TY   +  +   G+    + L++
Sbjct: 360 VVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIE 419

Query: 438 EMETKAIGPTHVTYTVV 454
           EM  K       T+ ++
Sbjct: 420 EMVGKGFSADSSTFRML 436



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 216/429 (50%), Gaps = 15/429 (3%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   G +  ++ ++ LLS +C   +I +A+ L  EM  +G +PD++TYS +I GLCK   
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
              A+QL  +M  K   PN  A+  I+  LC+  ++TEA  +F  ++      DV  Y+ 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           ++ G+  LG + EA  L++Q++E+ + P+ VTF  LI G CK   +++A  + +T+   G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           LEP   TY   ++ YC    +     L   M+ K   P   +Y ++I G CK  ++ EA 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            LL +M    +TPD  TY+T++R FC+    ++A +LL +M  + L P   TY+I++DGL
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C +G L  A  LL ++QE  I      YT +I+  C  G +  A   F  +  KG + ++
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 589 RDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             YT                  F  M  NG  P+     V++  F + GD  +   L   
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEE 420

Query: 634 MIKSGLLPD 642
           M+  G   D
Sbjct: 421 MVGKGFSAD 429



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 232/444 (52%), Gaps = 7/444 (1%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + ++ GLC ++++ DA+    E       P V++ + I++  CK+G   +A  L   M
Sbjct: 12  TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKM 71

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G  P+  +YN +I  LC    + EA++F ++M + G+ PD  TYS +  GF  L ++
Sbjct: 72  EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRV 131

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A  + ++++ +   P+ VT+T+LI G C+   + E   + E M  +G + +V  Y+ L
Sbjct: 132 NEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNAL 191

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   C   ++DEA  L   M+  G  P++ +Y+ILI G CK  ++ +A  L  EM  K +
Sbjct: 192 VDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +P+ F +  ++ G C+     EA+     +     + +++ Y+I++DG  K G++ EA +
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFE 311

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L + + E +I P+I  +  LI G C  GK+  AR L   + + G++P+ VTYT  ++   
Sbjct: 312 LLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLL 371

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G       L +EM      P   TY V+I+G  +      AV+L+E+M   G + D  
Sbjct: 372 KGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSS 431

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQ 508
           T+  +        DL  + ++++Q
Sbjct: 432 TFRML-------SDLESSDEIISQ 448



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 197/380 (51%), Gaps = 3/380 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G    A+ ++ KM+E   K ++  YN+++ +L   R      D + ++     P +V+
Sbjct: 57  KMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVF 116

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S ++ G C   R+ +A    ++   +   P+ V+   ++   CK      A  +F  M
Sbjct: 117 TYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETM 176

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + GL PD ++YN L+ G C    M+EA +  N M R G  P+  +Y+IL  G     +I
Sbjct: 177 TEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRI 236

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  ++ ++  K   PDI TY+ L+ G+CQ+G  +E  +L + M S G   N+I YS++
Sbjct: 237 DEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIV 296

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L  +CK G +DEA  LL  M+   ++P++  Y+ILI G+C   K+  A +L++ +  K I
Sbjct: 297 LDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGI 356

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P    +  ++ GL +  +  EA   F  + ++ C+ +   YN++I G+++ G+   AV+
Sbjct: 357 QPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVR 416

Query: 365 LYRQLIEKRISPSIVTFNSL 384
           L  +++ K  S    TF  L
Sbjct: 417 LIEEMVGKGFSADSSTFRML 436



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 20/170 (11%)

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M+ +G+ P  +T+NT++   C    +  A +L ++M     EP   TY+ +I+GLC  G+
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
              A  LL  ++E       VAY TII + C +  V +AM FF +MV+            
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVK------------ 108

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                    G PPD      +L  F   G +     L   M++  ++P+K
Sbjct: 109 --------EGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNK 150


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 163/573 (28%), Positives = 283/573 (49%), Gaps = 16/573 (2%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           Y   +  +GL  + +L DA+    E       PS++  + ++S   K+   +V   L   
Sbjct: 48  YREKLSRNGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQ 106

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G+  + ++Y+IL++  C    +  AL     M + G EPD +T S L  G+    +
Sbjct: 107 MQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 166

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           IS A  ++ +++  G  PD VT+  LI G        E + L + M+++G + ++  Y  
Sbjct: 167 ISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 226

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +++ +CK G ID AL LL +ME   ++ ++V Y+ +I GLCK   +  A  L+N+M +K 
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 286

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I P+ F + +++  LC     ++A      +I      +VV +N +ID + K G + EA 
Sbjct: 287 IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAE 346

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L+ ++I++ I P+IVT+NSLI GFC + ++ +A+++   +      P  VTY T +  +
Sbjct: 347 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGF 406

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+   ++  + L +EM  + +    VTY  +I+GL +      A ++ + M   GV PD 
Sbjct: 407 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 466

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           ITY+ ++   CK   L KA  +   +    +EP   TYNI+I+G+C  G +++   L  S
Sbjct: 467 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCS 526

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-----------FEISIRDYT 592
           L    +    + YTT+I   C +G   +A   F +M E G               +RD  
Sbjct: 527 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGD 586

Query: 593 KS----FFCMMLSNGFPPDQEICEVMLIAFHQG 621
           K+        M S GF  D     +++   H G
Sbjct: 587 KAASAELIKEMRSCGFVGDASTISMVINMLHDG 619



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/534 (27%), Positives = 278/534 (52%), Gaps = 7/534 (1%)

Query: 7   SRTGM----VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSET 59
           SR G+    + DAV +  +M +     SI  ++ LL     +   D++  L + ++    
Sbjct: 53  SRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI 112

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N YT SI+++  C++S+L  A+  L +     + P +V+L+++++ YC       A  
Sbjct: 113 PHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 172

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M++ G  PD  ++N LIHGL +     EA+   + M   G +PD  TY  +  G  
Sbjct: 173 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 232

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               I  A  +++K+     + ++V Y  +I G C+  ++++   L   M ++G K +V 
Sbjct: 233 KRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 292

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L+S +C  GR  +A  LL +M    + P++VT++ LI    K+ K+ +A +L++EM
Sbjct: 293 TYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 352

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             + I PN   + +++ G C  + + EA+  F  ++  +C+ DVV YN +I G+ K   +
Sbjct: 353 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRV 412

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            E ++L+R++ ++ +  + VT+N+LI G  + G    A+++   +   G+ P  +TY+  
Sbjct: 413 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 472

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C+ G +++ L + + ++   + P   TY ++I+G+CK  K+++   L   + + GV
Sbjct: 473 LDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
            P+ I Y T+I  FC+     +A  L  +M      P S  YN LI     +GD
Sbjct: 533 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGD 586



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/546 (28%), Positives = 262/546 (47%), Gaps = 15/546 (2%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  M+K    P    ++ L+  +      +  +     M   G+  +  TYSIL  
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLN 124

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F   SQ+  A  V+ K++  G +PDIVT + L+ GYC    + E + L + M+  G+K 
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKP 184

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + + ++ L+  +    +  EA+ L+  M A G +PDL TY  ++ GLCK+  +  A+ L 
Sbjct: 185 DTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 244

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M   +I  N   +  I+ GLC+ + + +A   F+ +       DV  YN +I      
Sbjct: 245 KKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNY 304

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   +A +L   +IE++I+P++VTFNSLI  F K GK+ +A +L D +    ++P+ VTY
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 364

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            + +N +C    +     +   M +K   P  VTY  +IKG CK  +++E ++L  +M  
Sbjct: 365 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQ 424

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+  + +TYNT+I+   +  D   A ++  +M    + P   TY+IL+DGLC  G L+ 
Sbjct: 425 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 484

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--S 594
           A  +   LQ+  +      Y  +I+  C  G V      FC +  KG + ++  YT   S
Sbjct: 485 ALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 544

Query: 595 FFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            FC              M  +G  PD      ++ A  + GD  +  EL   M   G + 
Sbjct: 545 GFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVG 604

Query: 642 DKFLIN 647
           D   I+
Sbjct: 605 DASTIS 610



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 241/509 (47%), Gaps = 15/509 (2%)

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +++A+    +M +    P  I +S L      +++      + +++   G   +  TY++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           L+  +C+   +   L +   M+  G++ +++  S LL+  C   RI EA+ L+ +M  +G
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
            KPD VT++ LI GL   +K  +A+ L + M ++   P+ F +G ++ GLC++  I  A 
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
                +       +VV+YN +IDG  K  ++ +A  L+ ++  K I P + T+NSLI   
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCL 301

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C  G+ +DA RLL  +    + P+ VT+ + ++A+ +EG +     L  EM  ++I P  
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 361

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VTY  +I G C   +L EA Q+   M      PD +TYNT+I+ FCK K + +  +L  +
Sbjct: 362 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFRE 421

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    L   + TYN LI GL   GD   A  +   +    +    + Y+ ++   C  G 
Sbjct: 422 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 481

Query: 569 VHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEV 613
           + KA+  F  + +   E +I  Y                   FC +   G  P+  I   
Sbjct: 482 LEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 541

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           M+  F + G       L   M + G LPD
Sbjct: 542 MISGFCRKGLKEEADALFREMKEDGTLPD 570



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 209/411 (50%), Gaps = 3/411 (0%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           +AV +I +M     +  + TY +++  L      D+   L   ++  +   NV   + +I
Sbjct: 204 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTII 263

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           DGLC+   + DA     +   K   P V + N+++S  C  G    A  L   M++  ++
Sbjct: 264 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  ++N LI      G + EA +  ++M +  ++P+ +TY+ L  GF +  ++  A ++
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              ++ K   PD+VTY  LI G+C+   VEEG++L   M  +G   N + Y+ L+  + +
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 443

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           +G  D A  +  +M + G+ PD++TYSIL+ GLCK  K+ KA+ ++  +   ++ PN + 
Sbjct: 444 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYT 503

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G+C+   + +    F SL +     +V++Y  MI G+ + G   EA  L+R++ 
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 563

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           E    P    +N+LI    ++G  A +  L+  ++  G    A T +  +N
Sbjct: 564 EDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 614



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 64/130 (49%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           +++ ++ S+   N+YT +I+I+G+C+  +++D        + K   P+V+    ++S +C
Sbjct: 488 VFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 547

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           + G  E A  LF  M + G  PD+  YN LI      G    + E   +M   G   DA 
Sbjct: 548 RKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAS 607

Query: 170 TYSILAKGFH 179
           T S++    H
Sbjct: 608 TISMVINMLH 617


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 152/534 (28%), Positives = 269/534 (50%), Gaps = 14/534 (2%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           LM  YGL P+  + + L++ L       + LE  + +   GV+PD   Y+++ K    L 
Sbjct: 180 LMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELK 239

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
             + A ++I +    G    IVTY V I G C+   V E ++++  +  +G K +++ Y 
Sbjct: 240 DFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYC 299

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +C+    +  + ++ EM  +G  P     S LI GL K   +  A +L N++   
Sbjct: 300 TLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKL 359

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN F + +++  LC+   + EA + F  +       + V Y I+IDG+ +   +  A
Sbjct: 360 GVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVA 419

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
              + ++IE  IS ++ ++NS+I   CK GK+  A  L   +   GL+P+  TYT+ ++ 
Sbjct: 420 FYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISG 479

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC++G + +   L  EM  K I P  VT+T +I GLC+  K+ EA +L ++M  + + P+
Sbjct: 480 YCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPN 539

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           ++TYN +I   C+  +  +AF+LL++M    L P + TY  LI GLC  G +  A   + 
Sbjct: 540 EVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFIN 599

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------- 592
            L   +  L ++ YT +++  C EG + +A+    +MV +G ++ +  Y           
Sbjct: 600 DLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQN 659

Query: 593 -KSFFCM---MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            +  F +   M   G  PD  I  +++  F + G+L   FE   +MI  G +P+
Sbjct: 660 DRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPN 713



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 164/600 (27%), Positives = 288/600 (48%), Gaps = 15/600 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T ++ I+GLC+  R+ +A+   +    K     +V+   ++   C++   EV   + 
Sbjct: 259 SIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMM 318

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M++ G  P   + + LI GL   GS+E A E  N +G+ GV P+   Y+ +       
Sbjct: 319 DEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKT 378

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  +   +  +G +P+ VTYT+LI G+ +   ++        M+  G    V +Y
Sbjct: 379 GKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSY 438

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +++  CK G++  A  L  EM   GLKP + TY+ LI G CK   V KA +LY+EM  
Sbjct: 439 NSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTG 498

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K I+PN+    A++ GLC+   + EA   FD ++    + + V YN++I+G+ + GN   
Sbjct: 499 KGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTR 558

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +L  ++I+K +SP   T+  LI G C  G+V++A+  ++ +         + YT  + 
Sbjct: 559 AFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQ 618

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C+EG I+  L   QEM  + +    V+Y V+I G   Q   +   +LL +M+  G+ P
Sbjct: 619 GFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQ-NDRILFELLREMHGKGMQP 677

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D + Y  +I  F K  +L+KAF+    M      P S TY  L++GL   G +  A  L 
Sbjct: 678 DNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLF 737

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF------EISIRDYTK-- 593
             +         + Y   +     EG++  A+     M++  F       I IR Y +  
Sbjct: 738 KRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIG 797

Query: 594 ------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                     +M+  G  PD       +  + + G++ +  ++   M++ GL PD+ + N
Sbjct: 798 KFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFN 857



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 258/492 (52%), Gaps = 13/492 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY------NLRHTDIMWDLYDDIKVSET 59
           + R   +  A +   KM E  +  ++ +YNS++        ++  ++++    D  +  T
Sbjct: 410 FGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPT 469

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
              V T + +I G C+   +  A     E  GK   P+ V+  A++   C++     A  
Sbjct: 470 ---VATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASK 526

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  M++  + P+  +YN+LI G C  G+   A E  ++M + G+ PD  TY  L  G  
Sbjct: 527 LFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLC 586

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++S A + I  L  K    D + YT L+ G+C+ G ++E L  R+ M+ +G +++++
Sbjct: 587 STGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLV 646

Query: 240 AYSVLLS-SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           +Y+VL+S ++ ++ RI     LL EM   G++PD V Y+ILI G  K   + KA + +  
Sbjct: 647 SYAVLISGALNQNDRI--LFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYI 704

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  +   PNS  + A++ GL +   + EA++ F  +++   I + + Y   +D   K GN
Sbjct: 705 MIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGN 764

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +  A+QL+  +++   + + VT+N LI G+C+ GK  +A +LLD +   G+ P  +TY+T
Sbjct: 765 MENALQLHNAMLQGSFA-NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYST 823

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
           F+  YC+ GN+   + + + M  + + P  V +  +I   C   +L  A+QL  DM + G
Sbjct: 824 FIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRG 883

Query: 479 VTPDQITYNTII 490
           + P Q TY++++
Sbjct: 884 LKPTQSTYHSLM 895



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 158/533 (29%), Positives = 263/533 (49%), Gaps = 35/533 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N++  + +I+ LC+  +L++A L     A +   P+ V+   ++  + +    +VA   F
Sbjct: 364 NLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYF 423

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M++ G+    +SYN +I+  C  G M+ A     +M   G++P   TY+ L  G+   
Sbjct: 424 NKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKD 483

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A+K+  ++  KG  P+ VT+T LICG CQI  + E  KL + M+      N + Y
Sbjct: 484 GLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTY 543

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+   C+ G    A  LL EM   GL PD  TY  LI GLC   +V +A +  N++  
Sbjct: 544 NVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHH 603

Query: 302 KRISPNSFAHGAILLGLCEKEMITEA-------------------------------RMY 330
           K    +   + A+L G C++  I EA                               R+ 
Sbjct: 604 KHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRIL 663

Query: 331 FDSL--IMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           F+ L  +    +Q D V+Y I+IDG++K GN+ +A + +  +I +   P+ VT+ +L+ G
Sbjct: 664 FELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNG 723

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
             K G V +A+ L   + +    P+ +TY  F++   +EGN++  L L   M   +   T
Sbjct: 724 LFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANT 783

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            VTY ++I+G C+  K QEA +LL+ M  IG+ PD ITY+T I  +CK  ++  A  +  
Sbjct: 784 -VTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWE 842

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
            M    L+P    +N LI   C+NG+L  A  L   +    +  T+  Y +++
Sbjct: 843 CMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 156/622 (25%), Positives = 293/622 (47%), Gaps = 40/622 (6%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDD-IKVSETPRNV 63
           ++  V +AV V   + E  LK  + TY +L+  L   +  ++  ++ D+ I++   P   
Sbjct: 272 KSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEA 331

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             + + I+GL +   ++ A   L +       P++   N++++  CK G  E A+ LF +
Sbjct: 332 AVSGL-IEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSV 390

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M + GL+P+  +Y ILI G      ++ A  + N M   G+     +Y+ +        +
Sbjct: 391 MAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGK 450

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A  + ++++ KG  P + TYT LI GYC+ G V +  KL   M  +G   N + ++ 
Sbjct: 451 MKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTA 510

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +C+  ++ EA  L  EM  + + P+ VTY++LI G C++    +A +L +EM  K 
Sbjct: 511 LICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKG 570

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           +SP+++ +  ++ GLC    ++EA+ + + L   +   D + Y  ++ G+ K G I EA+
Sbjct: 571 LSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEAL 630

Query: 364 ----------------------------------QLYRQLIEKRISPSIVTFNSLIYGFC 389
                                             +L R++  K + P  V +  LI GF 
Sbjct: 631 VARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFI 690

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K+G +  A      +   G  P++VTYT  +N   + G +     L + M      P H+
Sbjct: 691 KSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHI 750

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY   +  L K+  ++ A+QL   M + G   + +TYN +IR +C+    ++A +LL+ M
Sbjct: 751 TYGCFLDHLTKEGNMENALQLHNAM-LQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVM 809

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               + P   TY+  I   C  G++  A  +   + +  +   +V +  +I A C  G++
Sbjct: 810 IGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGEL 869

Query: 570 HKAMTFFCQMVEKGFEISIRDY 591
            +A+     M+ +G + +   Y
Sbjct: 870 DRALQLRNDMMLRGLKPTQSTY 891



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 154/595 (25%), Positives = 279/595 (46%), Gaps = 39/595 (6%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           ML   Y +   V D V V+  M++  L   ++T ++LL  L   R    + +L+D +  +
Sbjct: 160 MLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNA 219

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               + Y  ++V+  LC+      A   + +  G     S+V+                 
Sbjct: 220 GVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVT----------------- 262

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
                             YN+ I+GLC +  + EA+E    +G  G++ D +TY  L  G
Sbjct: 263 ------------------YNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLG 304

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
              + +     +++ +++  G  P     + LI G  ++G++E   +L   +   G   N
Sbjct: 305 LCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPN 364

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +  Y+ +++S+CK+G+++EA  L   M   GL P+ VTY+ILI G  ++ K+  A   +N
Sbjct: 365 LFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFN 424

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M    IS   +++ +++   C+   +  A + F  ++       V  Y  +I GY K G
Sbjct: 425 KMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDG 484

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + +A +LY ++  K I+P+ VTF +LI G C+  K+A+A +L D +    + P+ VTY 
Sbjct: 485 LVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYN 544

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +  +C EGN  R   LL EM  K + P   TY  +I GLC   ++ EA + + D++  
Sbjct: 545 VLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHK 604

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
               D++ Y  +++ FCK   +++A     +M    L+    +Y +LI G  +N + +  
Sbjct: 605 HQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG-ALNQNDRIL 663

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             LL  +    +    V YT +I      G++ KA  F+  M+ +G+  +   YT
Sbjct: 664 FELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYT 718



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 229/476 (48%), Gaps = 14/476 (2%)

Query: 3   AFVYSRTGMVH-DAVFVIAKMKEL--------DLKVSIQTYNSLLYNLRHTDIM---WDL 50
           A VYS   M++    F   KM EL         LK ++ TY SL+       ++   + L
Sbjct: 433 ATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKL 492

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           Y ++       N  T + +I GLCQ +++ +A     E    +  P+ V+ N ++  +C+
Sbjct: 493 YHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCR 552

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
            G    A  L   M+K GL PD ++Y  LI GLC  G + EA EF ND+       D + 
Sbjct: 553 EGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELC 612

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y+ L +GF    +I  A    Q+++ +G   D+V+Y VLI G     +      LRE M 
Sbjct: 613 YTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLRE-MH 671

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +G + + + Y++L+    KSG + +A    Y M   G  P+ VTY+ L+ GL K   V+
Sbjct: 672 GKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVN 731

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A  L+  M      PN   +G  L  L  KE   E  +   + ++     + V YNI+I
Sbjct: 732 EAKLLFKRMLVGEAIPNHITYGCFLDHLT-KEGNMENALQLHNAMLQGSFANTVTYNILI 790

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            GY ++G   EA +L   +I   + P  +T+++ IY +CK G V  A  + + +   GL+
Sbjct: 791 RGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLK 850

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
           P  V +   ++A C  G + R L L  +M  + + PT  TY  ++  L ++ +L +
Sbjct: 851 PDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQ 906



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 195/439 (44%), Gaps = 20/439 (4%)

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           + +LI  Y Q   V +G+ +  +M   G    V   S LL+++ +  +  + L L   + 
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G+KPD   Y+++++ LC+    +KA ++ N+      S +   +   + GLC+ + + 
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA     SL       D+V Y  ++ G  ++      +++  ++IE    PS    + LI
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI 337

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G  K G +  A  LL+ +   G+ P+   Y + +N+ C+ G ++    L   M  + + 
Sbjct: 338 EGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLN 397

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  VTYT++I G  ++ KL  A      M   G++    +YN++I   CK   ++ A  L
Sbjct: 398 PNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELL 457

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
             +M    L+PT ATY  LI G C +G +  A  L   +    I+   V +T +I   C 
Sbjct: 458 FKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQ 517

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
              + +A   F +MVE                        P++    V++    + G+  
Sbjct: 518 INKMAEASKLFDEMVEL--------------------KILPNEVTYNVLIEGHCREGNTT 557

Query: 626 SVFELAAVMIKSGLLPDKF 644
             FEL   MIK GL PD +
Sbjct: 558 RAFELLDEMIKKGLSPDTY 576



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 144/299 (48%), Gaps = 41/299 (13%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + ++ G C++ R+++A++  QE  G+     +VS   ++S        +  + LF L+ +
Sbjct: 614 TALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG----ALNQNDRILFELLRE 669

Query: 127 Y---GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
               G+ PD   Y ILI G   +G++++A EF   M   G  P+++TY+ L  G      
Sbjct: 670 MHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGY 729

Query: 184 ISGAWKVIQKLLI----------------------------------KGSDPDIVTYTVL 209
           ++ A  + +++L+                                  +GS  + VTY +L
Sbjct: 730 VNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNIL 789

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I GYCQIG  +E  KL +VM+  G   + I YS  +   CK G +D A+ +   M   GL
Sbjct: 790 IRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGL 849

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           KPD V ++ LI   C   ++ +A+QL N+M  + + P    + ++++ L ++  +T+ +
Sbjct: 850 KPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQVQ 908


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 174/658 (26%), Positives = 308/658 (46%), Gaps = 23/658 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R  MV DAV     M    L  S+ T N +L +L   +  D+ W  +  +       +V 
Sbjct: 117 RNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVA 176

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I+++ LC++ + ++A   L++       P+ V+ N +++ YCK G  + A  L   M
Sbjct: 177 TFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCM 236

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G+  D  +YN+ I  LC      +       M R+ V P+ ITY+ L  GF    +I
Sbjct: 237 ASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKI 296

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A KV  ++ +    P+ +TY  LI G+C  GN+ E L+L +VM+S G + N + Y  L
Sbjct: 297 EVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGAL 356

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L+ + K+        +L  M   G++   ++Y+ +I GLCK   + +A+QL ++M    +
Sbjct: 357 LNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSV 416

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +P+      ++ G      I  A+     +  +  + + +LY+ +I  Y K+G + EA+ 
Sbjct: 417 NPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALN 476

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
            Y  +          T N L+  FC+ GK+ +A   ++ +   GL+P++VT+   +N Y 
Sbjct: 477 AYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYG 536

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             G+  +  ++  +M +    P+  TY  ++KGLC    + EA++    +  I    D +
Sbjct: 537 NSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNV 596

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS- 543
            +NT + S C+  +L  A  L+N+M  ++  P + TY  LI GLC  G +  A  LL+S 
Sbjct: 597 IFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAA--LLLSG 654

Query: 544 --LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK-------GFEISIRDYTKS 594
             +++  +S     YT+++      G    A+  F +M+ K        F + I  Y++ 
Sbjct: 655 KAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRK 714

Query: 595 --------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                       M S     +     ++L  + +   +   F L   MI+ G LPDKF
Sbjct: 715 GKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKF 772



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/569 (25%), Positives = 269/569 (47%), Gaps = 4/569 (0%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYT 65
           TG + +A+ ++  M    L+ +  TY +LL   Y      ++  + + +++     +  +
Sbjct: 328 TGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHIS 387

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + +IDGLC+   L++A+  L +       P VV+ + +++ + ++G    AK + C M 
Sbjct: 388 YTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMY 447

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K GL P+   Y+ LI+  C  G ++EAL     M   G   D  T ++L   F    ++ 
Sbjct: 448 KTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLE 507

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A   +  +   G DP+ VT+  +I GY   G+  +   + + M S G   ++  Y  LL
Sbjct: 508 EAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLL 567

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +C  G I+EAL   + +  +    D V ++  +   C+   +  AI L NEM +    
Sbjct: 568 KGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFL 627

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQ 364
           P++F +  ++ GLC+K  I  A +     I    +  +  +Y  ++DG +K G+   A+ 
Sbjct: 628 PDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALY 687

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           ++ +++ K + P  V FN +I  + + GK +    +L T+K   L  +  TY   ++ Y 
Sbjct: 688 IFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYA 747

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +   + R   L ++M      P   ++  +I G C+      A+++L  + + G   D+ 
Sbjct: 748 KRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRF 807

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           T+N +I  FC+  +++KAF+L+ QM    + P   TYN L +GL    D   A  +L  L
Sbjct: 808 TFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVL 867

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
            E     T   Y T+I   C  G++  AM
Sbjct: 868 LESGSVPTNKQYITLINGMCRVGNIKGAM 896



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 145/599 (24%), Positives = 282/599 (47%), Gaps = 39/599 (6%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNV-- 63
            + R G +++A  ++ KM +  L  +   Y++L+YN      + +  +   V     +V  
Sbjct: 430  FFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVAD 489

Query: 64   -YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +T ++++   C+  +L++A  F+   +     P+ V+ + I++ Y   G A  A  +F 
Sbjct: 490  HFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFD 549

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF--------------------------- 155
             M  +G  P  F+Y  L+ GLCI G + EAL+F                           
Sbjct: 550  KMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSG 609

Query: 156  --------TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTY 206
                     N+M  +   PD  TY+ L  G     +I  A  +  K + KG   P+   Y
Sbjct: 610  NLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVY 669

Query: 207  TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            T L+ G  + G+    L + E ML++  + + +A++V++    + G+  +   +L  M++
Sbjct: 670  TSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKS 729

Query: 267  VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
              L  +L TY+IL+ G  K+  + +   LY +M      P+ F+  +++LG C+ +    
Sbjct: 730  KNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDV 789

Query: 327  ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
            A      + +   + D   +N++I  + +   + +A +L +Q+ +  + P++ T+N+L  
Sbjct: 790  AIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFN 849

Query: 387  GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
            G  +      A R+L  +   G  P+   Y T +N  C  GNI+  + L  EM+T  I  
Sbjct: 850  GLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISS 909

Query: 447  THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             +V  + +++GL    K++ A+ +L+ M  + + P   T+ T++  +CK  ++ KA +L 
Sbjct: 910  HNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELR 969

Query: 507  NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
            + M   +++     YN+LI GLC NGD++ A  L   +++ ++      Y  +I + CA
Sbjct: 970  SIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCA 1028



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 145/577 (25%), Positives = 282/577 (48%), Gaps = 9/577 (1%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDD-IKVSETPRNVYT 65
           GMV     ++ +M+   ++VS  +Y +++  L    ++ +   L DD +KVS  P +V T
Sbjct: 367 GMVSS---ILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNP-DVVT 422

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            S++I+G  +  ++ +A   + +       P+ +  + ++  YCK+G+ + A   + +M 
Sbjct: 423 FSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMN 482

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G   D F+ N+L+   C  G +EEA  F N M R G++P+++T+  +  G+       
Sbjct: 483 HSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDAL 542

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A+ V  K+   G  P + TY  L+ G C  G++ E LK    +      ++ + ++  L
Sbjct: 543 KAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKL 602

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI- 304
           +S C+SG + +A+ L+ EM      PD  TY+ LI GLCK+ K+  A+ L  +   K + 
Sbjct: 603 TSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLL 662

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SPN   + +++ GL +      A   F+ ++  +   D V +N++ID Y + G   +   
Sbjct: 663 SPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVND 722

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +   +  K +  ++ T+N L++G+ K   +A    L   +  HG  P   ++ + +  YC
Sbjct: 723 ILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYC 782

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +  +    + +L+ +  +       T+ ++I   C++ ++++A +L++ M    V P+  
Sbjct: 783 QSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVD 842

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TYN +     +  D  KA ++L  +      PT+  Y  LI+G+C  G++K A  L   +
Sbjct: 843 TYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEM 902

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           +   IS   VA + I++       +  A+     M+E
Sbjct: 903 KTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLE 939



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 179/387 (46%), Gaps = 15/387 (3%)

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           + +LIR   +   V  A+Q +  M  + ++P+ +    +L  L +++ +     +F  ++
Sbjct: 108 FDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGML 167

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 DV  +NI+++   + G    A  L R++ E  + P+ VT+N+L+  +CK G+  
Sbjct: 168 AKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYK 227

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A +L+D +   G+     TY  F++  C +    +   LL+ M    + P  +TY  +I
Sbjct: 228 AASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLI 287

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G  ++ K++ A ++ ++M +  + P+ ITYNT+I   C   ++ +A +L++ M  H L 
Sbjct: 288 SGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLR 347

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TY  L++GL  N +      +L  ++   + ++ ++YT +I   C  G + +A+  
Sbjct: 348 PNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQL 407

Query: 576 ---------------FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
                          F  ++   F +   +  K   C M   G  P+  +   ++  + +
Sbjct: 408 LDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCK 467

Query: 621 GGDLGSVFELAAVMIKSGLLPDKFLIN 647
            G L       AVM  SG + D F  N
Sbjct: 468 MGYLKEALNAYAVMNHSGHVADHFTCN 494



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 187/421 (44%), Gaps = 15/421 (3%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N   + +L+    ++  + +A+   Y M   GL P + T ++++  L K+ KV      +
Sbjct: 104 NPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFF 163

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             M +K I P+      +L  LCE+     A      +  S      V YN +++ Y K 
Sbjct: 164 KGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKK 223

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G    A QL   +  K I   + T+N  I   C++ + A    LL  ++ + + P+ +TY
Sbjct: 224 GRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITY 283

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T ++ +  EG I+    +  EM    + P  +TY  +I G C    + EA++L++ M  
Sbjct: 284 NTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVS 343

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+ P+++TY  ++    K  +      +L +M +  +  +  +Y  +IDGLC NG L+ 
Sbjct: 344 HGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEE 403

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIR 589
           A  LL  + + +++   V ++ +I      G ++ A    C+M + G       +   I 
Sbjct: 404 AVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIY 463

Query: 590 DYTK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           +Y K        + + +M  +G   D   C V++  F + G L         M + GL P
Sbjct: 464 NYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDP 523

Query: 642 D 642
           +
Sbjct: 524 N 524



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 190/417 (45%), Gaps = 4/417 (0%)

Query: 60   PRN-VYTNSIVIDGLCQQSRLQDAILFLQETAGKEF-GPSVVSLNAIMSRYCKLGFAEVA 117
            P N  YTN  +I GLC++ ++  A+L   +   K    P+     +++    K G A  A
Sbjct: 628  PDNFTYTN--LIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAA 685

Query: 118  KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              +F  ML   + PD  ++N++I      G   +  +  + M    +  +  TY+IL  G
Sbjct: 686  LYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHG 745

Query: 178  FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
            +     ++  + + + ++  G  PD  ++  LI GYCQ  + +  +K+   +  +G  ++
Sbjct: 746  YAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVID 805

Query: 238  VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
               +++L++  C+   + +A  L+ +M    + P++ TY+ L  GL +    HKA ++  
Sbjct: 806  RFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQ 865

Query: 298  EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
             +      P +  +  ++ G+C    I  A    D +         V  + ++ G     
Sbjct: 866  VLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSK 925

Query: 358  NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
             I  A+ +   ++E +I P++ TF +L++ +CK   VA A  L   ++   ++   V Y 
Sbjct: 926  KIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYN 985

Query: 418  TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
              ++  C  G+I+    L +EM+ + + P    Y V+I   C      E+ +LL D+
Sbjct: 986  VLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDI 1042



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 155/357 (43%), Gaps = 50/357 (14%)

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS--------------------- 377
           C  +  +++++I   ++   +G+AVQ +  +  + ++PS                     
Sbjct: 101 CNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFW 160

Query: 378 --------------IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
                         + TFN L+   C+ GK  +A  LL  ++  G+ P+AVTY T +N Y
Sbjct: 161 SFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWY 220

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++G  +    L+  M +K IG    TY V I  LC+  +  +   LL+ M    V P++
Sbjct: 221 CKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNE 280

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           ITYNT+I  F +   +  A ++ ++M L NL P S TYN LI G C  G++  A  L+  
Sbjct: 281 ITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDV 340

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF--FCM--- 598
           +  H +   +V Y  ++       +     +   +M   G  +S   YT      C    
Sbjct: 341 MVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGM 400

Query: 599 ----------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                     ML     PD     V++  F + G + +  E+   M K+GL+P+  L
Sbjct: 401 LEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGIL 457


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 138/441 (31%), Positives = 239/441 (54%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           +V SLN +++  C+L   + +  +   M K G+HPDA ++N LI+GLC  G ++EA+E  
Sbjct: 127 NVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELF 186

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           N+M + G EP+ I+Y+ +  G       S A  V +K+   G  P++VTY+ +I   C+ 
Sbjct: 187 NEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKD 246

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
             V + ++    M+ +G   NV  Y+ ++   C  G+++EA  L  EM    + P+ VT+
Sbjct: 247 RLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTF 306

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +IL+ GLCK+  V +A  ++  M  K + P+   + A++ G C + ++ EA+  F+ +I 
Sbjct: 307 TILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIR 366

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
             C      YNI+I+GY K   + EA  L  ++  K ++P  VT+++L+ G C+ G+  +
Sbjct: 367 KGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKE 426

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  L   +  +G  P+ VTY   ++ +C+ G++   L LL+ M+ K + P  V YT++I+
Sbjct: 427 ALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIE 486

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           G+    KL+ A +L   ++  G  PD  TY  +I+   K     +A+ L  +M      P
Sbjct: 487 GMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 546

Query: 517 TSATYNILIDGLCVNGDLKNA 537
            S +YN++I G   N D   A
Sbjct: 547 NSCSYNVMIQGFLQNQDSSTA 567



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 254/496 (51%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PSVV     +  + K         L   M  + +  + +S NILI+ LC    ++ ++  
Sbjct: 91  PSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSV 150

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + G+ PDAIT++ L  G     +I  A ++  +++ +G +P++++YT +I G C+
Sbjct: 151 LGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCK 210

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            GN    + + + M   G K NV+ YS ++ S+CK   +++A+  L EM   G+ P++ T
Sbjct: 211 TGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFT 270

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ ++ G C   ++++A +L+ EM  + + PN+     ++ GLC++ M++EAR+ F+++ 
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMT 330

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D+  YN ++DGY     + EA +++  +I K  +P   ++N LI G+CK+ ++ 
Sbjct: 331 EKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMD 390

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A+ LL  +    L P  VTY+T M   C+ G  +  L L +EM +    P  VTY +++
Sbjct: 391 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILL 450

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G CK   L EA++LL+ M    + P+ + Y  +I        L  A +L ++++     
Sbjct: 451 DGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTR 510

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TY ++I GL   G    A  L   +++        +Y  +I+      D   A+  
Sbjct: 511 PDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRL 570

Query: 576 FCQMVEKGFEISIRDY 591
             +MV K F +++  +
Sbjct: 571 IDEMVGKRFSVNLSTF 586



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 235/464 (50%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M++    P    +   +            +   N M    V  +  + +IL      
Sbjct: 81  FYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCR 140

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L+ +  +  V+ K+   G  PD +T+  LI G C  G ++E ++L   M+ +G + NVI+
Sbjct: 141 LNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVIS 200

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ +++ +CK+G    A+ +  +ME  G KP++VTYS +I  LCK   V+ A++  +EM 
Sbjct: 201 YTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMV 260

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            + I PN F + +I+ G C    + EA   F  ++  + + + V + I++DG  K G + 
Sbjct: 261 ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVS 320

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  ++  + EK + P I T+N+L+ G+C    + +A+++ + +   G  P A +Y   +
Sbjct: 321 EARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILI 380

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YC+   +    +LL EM  KA+ P  VTY+ +++GLC+  + +EA+ L ++M   G  
Sbjct: 381 NGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPH 440

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ +TY  ++  FCK   L +A +LL  M    LEP    Y ILI+G+ + G L+ A  L
Sbjct: 441 PNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKEL 500

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
              L           YT +IK    EG   +A   F +M + GF
Sbjct: 501 FSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 544



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 237/502 (47%), Gaps = 15/502 (2%)

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +++AL     M R    P  + +      F    Q S    +  ++ +     ++ +  +
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI   C++ +V+  + +   M   G   + I ++ L++ +C  G+I EA+ L  EM   G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
            +P++++Y+ +I GLCK      A+ ++ +M      PN   +  I+  LC+  ++ +A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
            +   ++      +V  YN ++ G+  LG + EA +L+++++ + + P+ VTF  L+ G 
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           CK G V++AR + +T+   G+EP   TY   M+ YC +  +     + + M  K   P  
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
            +Y ++I G CK  ++ EA  LL +MY   + PD +TY+T+++  C+    ++A  L  +
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M  +   P   TY IL+DG C +G L  A  LL S++E  +    V YT +I+     G 
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493

Query: 569 VHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEV 613
           +  A   F ++   G    IR YT                  F  M  +GF P+     V
Sbjct: 494 LEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 553

Query: 614 MLIAFHQGGDLGSVFELAAVMI 635
           M+  F Q  D  +   L   M+
Sbjct: 554 MIQGFLQNQDSSTAIRLIDEMV 575



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 190/397 (47%), Gaps = 32/397 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           +TG    AV V  KM++   K ++ TY                                S
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTY--------------------------------S 237

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
            +ID LC+   + DA+ FL E   +   P+V + N+I+  +C LG    A  LF  M+  
Sbjct: 238 TIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGR 297

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            + P+  ++ IL+ GLC  G + EA      M   GVEPD  TY+ L  G+ L   ++ A
Sbjct: 298 DVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEA 357

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            KV + ++ KG  P   +Y +LI GYC+   ++E   L   M  +    + + YS L+  
Sbjct: 358 KKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQG 417

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C+ GR  EAL L  EM + G  P+LVTY IL+ G CK   + +A++L   M  K++ PN
Sbjct: 418 LCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPN 477

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  ++ G+     +  A+  F  L       D+  Y +MI G +K G   EA  L+R
Sbjct: 478 IVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFR 537

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           ++ +    P+  ++N +I GF +N   + A RL+D +
Sbjct: 538 KMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 574



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 196/378 (51%), Gaps = 38/378 (10%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           +V+DA+  +++M E  +  ++ TYNS+++   NL   +    L+ ++   +   N  T +
Sbjct: 248 LVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFT 307

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I++DGLC++  + +A L  +    K   P + + NA+M  YC       AK +F +M++ 
Sbjct: 308 ILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRK 367

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  P A SYNILI+G C +  M+EA     +M    + PD +TYS L +G   L +   A
Sbjct: 368 GCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEA 427

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             + +++   G  P++VTY +L+ G+C+ G+++E LKL + M  +  + N++ Y++L+  
Sbjct: 428 LNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEG 487

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           M  +G+++ A  L  ++   G +PD+ TY+++I+GL K+    +A  L+ +M      PN
Sbjct: 488 MFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPN 547

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           S +                                   YN+MI G+++  +   A++L  
Sbjct: 548 SCS-----------------------------------YNVMIQGFLQNQDSSTAIRLID 572

Query: 368 QLIEKRISPSIVTFNSLI 385
           +++ KR S ++ TF  L+
Sbjct: 573 EMVGKRFSVNLSTFQMLL 590



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 144/285 (50%), Gaps = 4/285 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL--YNL-RHTDIMWDLYDDIKVSETPRNVY 64
           + GMV +A  V   M E  ++  I TYN+L+  Y L R  +    +++ +         +
Sbjct: 315 KEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAH 374

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           + +I+I+G C+  R+ +A   L E   K   P  V+ + +M   C+LG  + A  LF  M
Sbjct: 375 SYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEM 434

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             YG HP+  +Y IL+ G C  G ++EAL+    M    +EP+ + Y+IL +G  +  ++
Sbjct: 435 CSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKL 494

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++  KL   G+ PDI TYTV+I G  + G  +E   L   M   GF  N  +Y+V+
Sbjct: 495 EVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVM 554

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           +    ++     A+ L+ EM       +L T+ +L+  L  QD++
Sbjct: 555 IQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL-DLESQDEI 598


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 174/609 (28%), Positives = 295/609 (48%), Gaps = 56/609 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL--------YNLRHTDIMWDLYDDIKVS 57
           Y R G V +AV V  +M   + + SI +YN+++        +N  H      +Y  +K  
Sbjct: 86  YGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHK-----VYLRMKHE 140

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +V T +I I   C+  R   A+  L     +    + V    ++S + +  +   A
Sbjct: 141 GIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEA 200

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             LF  ML+ G+ P   ++N L+H LC  G ++E  +  N + ++GV P+  T++I  +G
Sbjct: 201 YELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQG 260

Query: 178 FHLLSQISGA-WKVIQ------KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
                 + GA  KV++      K++ KG +PD  TY  +I GY ++G +++  ++ +   
Sbjct: 261 LCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAK 320

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +GF  +   Y  L+  +C+ G ID AL L  E    GLKP +V Y+ LI+GL +Q  V 
Sbjct: 321 FKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVL 380

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           KA+QL N+M  + +SP                                   D+  YN++I
Sbjct: 381 KALQLMNDMSKEGMSP-----------------------------------DIWTYNLVI 405

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           +G  K+G + +A  L    I K   P I TFN+LI G+CK  K+ +A  +LD++  HG+ 
Sbjct: 406 NGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVT 465

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P  +TY + +N  C+    + ++   + +  K   P  +TY ++I+ LCK  K+ EA+ L
Sbjct: 466 PDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDL 525

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM-WLHNLEPTSATYNILIDGLC 529
           LE++   G+ PD +++ T+I  FC   DL +A+QL  +M   + +  T ATYNI+I+   
Sbjct: 526 LEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFS 585

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
              D+  A  L   + +         Y  +I   C  G+V+    F  + +E GF  S+ 
Sbjct: 586 EKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLT 645

Query: 590 DYTKSFFCM 598
            + +   C+
Sbjct: 646 TFGRVINCL 654



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 151/562 (26%), Positives = 256/562 (45%), Gaps = 23/562 (4%)

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
           + M  Y + G  + A  +F  M  Y   P  FSYN +++ L   G   +A +    M   
Sbjct: 81  SAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHE 140

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G+ PD  T++I  K F    +   A +++  +  +G + + V Y  +I G+ +     E 
Sbjct: 141 GIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEA 200

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
            +L   ML  G   ++  ++ L+  +CK G + E   LL ++   G+ P+L T++I I+G
Sbjct: 201 YELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQG 260

Query: 283 LCKQ-------DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           LC++        KV +A    ++M +K + P+ F +  I+ G  +   I +A        
Sbjct: 261 LCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAK 320

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
               + D   Y  +I G  + G+I  A+ L+ + + K + PSIV +N+LI G  + G V 
Sbjct: 321 FKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVL 380

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A +L++ +   G+ P   TY   +N  C+ G +     LL     K   P   T+  +I
Sbjct: 381 KALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLI 440

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G CK+ K+  A+ +L+ M+  GVTPD ITYN+I+   CK        +    +      
Sbjct: 441 DGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCL 500

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TYNILI+ LC    +  A  LL  ++   +    V++ T+I   C  GD+ +A   
Sbjct: 501 PNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQL 560

Query: 576 FCQMVEK--------GFEISIR--------DYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
           F +M ++         + I I         D  +  F  M   G  PD     VM+  F 
Sbjct: 561 FRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFC 620

Query: 620 QGGDLGSVFELAAVMIKSGLLP 641
           + G++ S ++     I+ G +P
Sbjct: 621 KVGNVNSGYDFLLKEIEIGFVP 642



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 188/386 (48%), Gaps = 4/386 (1%)

Query: 33  TYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN+++Y       + D   +  D K      + +T   +I G+CQ   +  A+   +E 
Sbjct: 295 TYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEA 354

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
            GK   PS+V  N ++    + G    A  L   M K G+ PD ++YN++I+GLC  G +
Sbjct: 355 LGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCV 414

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
            +A    N     G  PD  T++ L  G+    ++  A  ++  +   G  PD++TY  +
Sbjct: 415 SDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSI 474

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + G C+    E+ ++  ++++ +G   N+I Y++L+ S+CK+ ++ EAL LL E+   GL
Sbjct: 475 LNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGL 534

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK-RISPNSFAHGAILLGLCEKEMITEAR 328
            PD V++  +I G C    + +A QL+  M  + RI      +  ++    EK  +  A+
Sbjct: 535 IPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQ 594

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             F  +    C  D   Y +MIDG+ K+GN+        + IE    PS+ TF  +I   
Sbjct: 595 KLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCL 654

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAV 414
           C   +V +A  ++  +   G+ P AV
Sbjct: 655 CVQHRVHEAVGIVHLMVRTGVVPEAV 680



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/549 (24%), Positives = 239/549 (43%), Gaps = 71/549 (12%)

Query: 151 EALEFTNDMGRH-GVEPDAITYSILAK--GFHLLSQISGAWKVIQKLLIK---GSDPDIV 204
           +AL   N + +  G +   +TY  + +  GFH      G +  ++++L++     D  ++
Sbjct: 22  KALSIFNSVKKEDGFKHTFLTYKRMIEKLGFH------GEFDAMERVLMEMRLNVDNSLL 75

Query: 205 --TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
              Y   +  Y + G V+E + + E M     + ++ +Y+ +++ + + G  ++A  +  
Sbjct: 76  EGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYL 135

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
            M+  G+ PD+ T++I I+  C+  +   A++L N M S+    N+  +  ++ G  E+ 
Sbjct: 136 RMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEEN 195

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
              EA   F+ ++       +  +N ++    K G++ E  +L  ++++  + P++ TFN
Sbjct: 196 YQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFN 255

Query: 383 SLI------------------------------------------YGFCKNGKVADARRL 400
             I                                          YG+ K GK+ DA R+
Sbjct: 256 IFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRI 315

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L   K  G  P   TY + +   C++G+I   LAL +E   K + P+ V Y  +IKGL +
Sbjct: 316 LKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQ 375

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
           Q  + +A+QL+ DM   G++PD  TYN +I   CK   +  A  LLN        P   T
Sbjct: 376 QGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFT 435

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           +N LIDG C    + NA  +L S+  H ++   + Y +I+   C        M  F  ++
Sbjct: 436 FNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIM 495

Query: 581 EKG-------FEISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
           EKG       + I I    K+            + + G  PD      ++  F   GDL 
Sbjct: 496 EKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLD 555

Query: 626 SVFELAAVM 634
             ++L   M
Sbjct: 556 EAYQLFRRM 564



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 152/322 (47%), Gaps = 41/322 (12%)

Query: 27  LKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAI 83
           LK SI  YN+L+  L    ++     L +D+       +++T ++VI+GLC+   + DA 
Sbjct: 359 LKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDAN 418

Query: 84  LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGL 143
             L     K + P + + N ++  YCK    + A G+   M  +G+ PD  +YN +++GL
Sbjct: 419 NLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGL 478

Query: 144 CIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
           C A   E+ +E    +   G  P+ ITY+IL +      +++ A  +++++  +G  PD 
Sbjct: 479 CKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDP 538

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--NVIAYSVLLSSMCKSGRIDEALGLL 261
           V++  +I G+C  G+++E  +L   M  Q +++   V  Y++++++  +   +D A  L 
Sbjct: 539 VSFGTVISGFCNNGDLDEAYQLFRRM-EQQYRICHTVATYNIMINAFSEKLDMDMAQKLF 597

Query: 262 YEMEAVGLKPDLVTYSILIRGLCK-----------------------------------Q 286
           +EM   G  PD  TY ++I G CK                                   Q
Sbjct: 598 HEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQ 657

Query: 287 DKVHKAIQLYNEMCSKRISPNS 308
            +VH+A+ + + M    + P +
Sbjct: 658 HRVHEAVGIVHLMVRTGVVPEA 679



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 180/432 (41%), Gaps = 30/432 (6%)

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV--TYSILIRG 282
              V    GFK   + Y  ++  +   G  D    +L EM  + +   L+   Y   +R 
Sbjct: 27  FNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMR-LNVDNSLLEGVYVSAMRN 85

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
             ++ KV +A+ ++  M      P+ F++ AI+  L E     +A   +  +       D
Sbjct: 86  YGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPD 145

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           V  + I I  + +      A++L   +  +    + V + ++I GF +     +A  L +
Sbjct: 146 VCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFN 205

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G+ P   T+   M+  C++G++Q    LL ++    + P   T+ + I+GLC++ 
Sbjct: 206 KMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKG 265

Query: 463 KLQ-------EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            L+       EA   L  M   G+ PD  TYNTII  + K   ++ A ++L         
Sbjct: 266 VLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFV 325

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TY  LI G+C +GD+ +A  L        +  + V Y T+IK    +G V KA+  
Sbjct: 326 PDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQL 385

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
              M ++G    I  Y       ++ NG      +C++        G +     L    I
Sbjct: 386 MNDMSKEGMSPDIWTYN------LVING------LCKM--------GCVSDANNLLNAAI 425

Query: 636 KSGLLPDKFLIN 647
             G LPD F  N
Sbjct: 426 AKGYLPDIFTFN 437


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 176/603 (29%), Positives = 289/603 (47%), Gaps = 32/603 (5%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIM-----WDLYDDIKVSE 58
            Y   G  H A+ V  KM  L LK ++ T N+LL  L R+          +++DD+    
Sbjct: 140 AYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIG 199

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGK-EFGPSVVSLNAIMSRYCKLGFAEVA 117
              +V T +++++G C + +L+DA+  L+    +    P  V+ N I+    K G     
Sbjct: 200 VSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDV 259

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           K L   M + GL P+  +YN L++G C  GS++EA +    M +  + PD  TY+IL  G
Sbjct: 260 KDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILING 319

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                 I    +++  +      PD+VTY  LI G  ++G   E  KL E M + G K N
Sbjct: 320 VCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPN 379

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            + +++ L  +CK  + +E    + E+ E  G  PD+VTY  LI+   K   +  A+++ 
Sbjct: 380 QVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMM 439

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM  K I  N+     IL  LC++  + EA    DS      I D V Y  +I GY + 
Sbjct: 440 REMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFRE 499

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             + +A +++ ++   +I+P++ TFNSLI G C +GK   A    D +   GL P   T+
Sbjct: 500 EKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTF 559

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            + +  YC+EG +++      E    +  P + T  +++ GLCK+   ++A+     + +
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-I 618

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
                D +TYNT+I +FCK K L++A+ LL++M    LEP   TYN +I  L  +G L  
Sbjct: 619 TEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSE 678

Query: 537 ADCLL-----------------------VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           AD LL                        S  +  +    +AY+ +I   C+ G + +  
Sbjct: 679 ADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKTEAIAYSDVINELCSRGRLKEHS 738

Query: 574 TFF 576
           T +
Sbjct: 739 TSY 741



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 276/541 (51%), Gaps = 7/541 (1%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIM---S 106
           L+ ++ +S  P     + I +       +   A+   Q+    +  P++++ N ++    
Sbjct: 119 LHPNLHLSPPPSKALFD-IALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLV 177

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVE 165
           RY        A+ +F  M+K G+  D  ++N+L++G C+ G +E+AL     M     V 
Sbjct: 178 RYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVN 237

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           PD +TY+ + K      ++S    ++  +   G  P+ VTY  L+ GYC++G+++E  ++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
            E+M       ++  Y++L++ +C +G I E L L+  M+++ L+PD+VTY+ LI G  +
Sbjct: 298 VELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFE 357

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQDVV 344
                +A +L  +M +  + PN   H   L  LC++E   E       L+ M     D+V
Sbjct: 358 LGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIV 417

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            Y+ +I  Y+K+G++  A+++ R++ +K I  + +T N+++   CK  KV +A  LLD+ 
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSA 477

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G     VTY T +  Y  E  +++   +  EM+   I PT  T+  +I GLC   K 
Sbjct: 478 HKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKT 537

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           + A++  +++   G+ PD  T+N+II  +CK   + KAF+  N+   H+ +P + T NIL
Sbjct: 538 ELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           ++GLC  G  + A     +L      +  V Y T+I A C +  + +A     +M EK  
Sbjct: 598 LNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRL 656

Query: 585 E 585
           E
Sbjct: 657 E 657



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 220/467 (47%), Gaps = 20/467 (4%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK---SGRIDEA 257
           P    + + +  Y   G     L++ + M+    K N++  + LL  + +   S  I  A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK-RISPNSFAHGAILL 316
             +  +M  +G+  D+ T+++L+ G C + K+  A+ +   M S+  ++P++  +  IL 
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
            + +K  +++ +     +  +  + + V YN ++ GY KLG++ EA Q+   + +  I P
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            + T+N LI G C  G + +   L+D +K   L+P  VTY T ++   E G       L+
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI-GVTPDQITYNTIIRSFCK 495
           ++ME   + P  VT+ + +K LCK+ K +E  + ++++  + G +PD +TY+T+I+++ K
Sbjct: 369 EQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLK 428

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
             DL  A +++ +M    ++  + T N ++D LC    +  A  LL S  +    + +V 
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVT 488

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMML 600
           Y T+I  +  E  V KA   + +M       ++  +                   F  + 
Sbjct: 489 YGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELA 548

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            +G  PD      +++ + + G +   FE     IK    PD +  N
Sbjct: 549 ESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCN 595



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 222/470 (47%), Gaps = 19/470 (4%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSE 58
           L + Y + G + +A  ++  MK+ ++   + TYN L+  + +   +    +L D +K  +
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLK 340

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK-LGFAEVA 117
              +V T + +IDG  +     +A   +++       P+ V+ N  +   CK     EV 
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVT 400

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + +  L+  +G  PD  +Y+ LI      G +  ALE   +MG+ G++ + IT + +   
Sbjct: 401 RKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A  ++     +G   D VTY  LI GY +   VE+  ++ + M        
Sbjct: 461 LCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPT 520

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V  ++ L+  +C  G+ + A+    E+   GL PD  T++ +I G CK+ +V KA + YN
Sbjct: 521 VTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYN 580

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           E       P+++    +L GLC++ M  +A  +F++LI    + D V YN MI  + K  
Sbjct: 581 ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREV-DTVTYNTMISAFCKDK 639

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK-LHGLEPSAVTY 416
            + EA  L  ++ EKR+ P   T+NS+I    ++GK+++A  LL       G     +  
Sbjct: 640 KLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHL 699

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            T  N    E          +E++T+AI      Y+ VI  LC + +L+E
Sbjct: 700 ETEKNPATSESK--------EELKTEAIA-----YSDVINELCSRGRLKE 736


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 152/506 (30%), Positives = 258/506 (50%), Gaps = 21/506 (4%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P  F +N ++  L      + A+ F+  M   G++P+  T++IL   F  L Q++ A+ +
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           + K+L  G  PD VT   L+ G C  G V+E L   + ++ + F L+ ++Y  L++ +CK
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 251 SGRIDEALGLLYEMEAVGL-KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           SG    AL LL ++E + L +PD++ Y+ +I   CK   V  A  LY+EM  K+I PN  
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
              +++ G C    + EA    + + ++N   +V  +NI+IDG  K G + +A  +   +
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           I++ + P++VT+ SL+ G+    +V  A+ + +TI L G+ P+  +Y+  +N  C+   +
Sbjct: 291 IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMV 350

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
              + L +EM  K + P  VTY+ +I GLCK  ++ +   L++++   G   + ITYN++
Sbjct: 351 DEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSL 410

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           +   CK   + KA  LL +M    ++P  +TY  L+DGLC NG LK+A  +   L     
Sbjct: 411 LNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGY 470

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
            L    YT +I   C EG   +A++   QM + G             CM       PD  
Sbjct: 471 PLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNG-------------CM-------PDAV 510

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMI 635
             E ++ A  +    G   +L   MI
Sbjct: 511 TYETLISALFKNNKNGKAVKLLREMI 536



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 149/517 (28%), Positives = 272/517 (52%), Gaps = 19/517 (3%)

Query: 25  LDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAIL 84
           L+ ++ IQ   S + NL   D +      + ++     ++  + ++  L + +  + AI 
Sbjct: 17  LNRRLHIQPLPSFIDNL--DDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAIS 74

Query: 85  FLQETAGKEFGPSVVSLNAIM---SRYCKLGFA--EVAKGLFCLMLKYGLHPDAFSYNIL 139
           F Q+   K   P + + N ++   S  C+L FA   VAK     +LK G  PD  + N L
Sbjct: 75  FSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAK-----ILKLGYQPDTVTVNTL 129

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK----LL 195
           + GLC+ G ++EAL F + + R     D ++Y  L  G     +   A ++++K    LL
Sbjct: 130 LRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLL 189

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
           ++   PD++ YT +I  +C+   V +   L   M+ +    NV+ ++ L+   C  G++ 
Sbjct: 190 VR---PDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLK 246

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           EA+GLL EM    + P++ T++ILI GLCK+ +V KA  + + M  + + PN   + +++
Sbjct: 247 EAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLM 306

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            G    + + +A+  F+++ +     +V  Y++MI+G  K   + EAV+L++++  K ++
Sbjct: 307 DGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMT 366

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+ VT++SLI G CK+G+++D   L+D I   G   + +TY + +N  C+   + + +AL
Sbjct: 367 PNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIAL 426

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           L +M+ + I P   TYT ++ GLCK  +L++A ++ +D+   G   +   Y  +I   CK
Sbjct: 427 LTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCK 486

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
                +A  LL+QM  +   P + TY  LI  L  N 
Sbjct: 487 EGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNN 523



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 175/325 (53%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           +DLY ++ V +   NV T + +I G C   +L++A+  L E +     P+V + N ++  
Sbjct: 214 YDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDG 273

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
            CK G  + A  +  +M+K G+ P+  +Y  L+ G  +   + +A    N +   GV P+
Sbjct: 274 LCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPN 333

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
             +YS++  G      +  A K+ +++ +K   P+ VTY+ LI G C+ G + +   L +
Sbjct: 334 VHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLID 393

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            + ++G   N+I Y+ LL+ +CK+ ++D+A+ LL +M+  G++PD+ TY+ L+ GLCK  
Sbjct: 394 EINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNG 453

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           ++  A ++Y ++  K    N   +  ++ GLC++    EA      +  + C+ D V Y 
Sbjct: 454 RLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYE 513

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEK 372
            +I    K    G+AV+L R++I +
Sbjct: 514 TLISALFKNNKNGKAVKLLREMIAR 538



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 169/335 (50%), Gaps = 38/335 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           + +  +V DA  + ++M    +  ++ T+NSL+Y       + +   L +++ ++    N
Sbjct: 204 FCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPN 263

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT +I+IDGLC++  ++ A   L     +   P+VV+  ++M  Y  +     AK +F 
Sbjct: 264 VYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFN 323

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   G+ P+  SY+++I+GLC    ++EA++   +M    + P+ +TYS L  G     
Sbjct: 324 TISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSG 383

Query: 183 QISGAWKVIQ-----------------------------------KLLIKGSDPDIVTYT 207
           +IS  W +I                                    K+  +G  PD+ TYT
Sbjct: 384 RISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYT 443

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            L+ G C+ G +++  ++ + +L +G+ LN+  Y+V+++ +CK G  DEAL LL +ME  
Sbjct: 444 TLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDN 503

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           G  PD VTY  LI  L K +K  KA++L  EM ++
Sbjct: 504 GCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 5/197 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
           +  MV +AV +  +M   ++  +  TY+SL+  L    R +D+ WDL D+I     P N+
Sbjct: 346 KNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDV-WDLIDEINNRGQPANI 404

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +++GLC+  ++  AI  L +   +   P + +   ++   CK G  + A+ ++  
Sbjct: 405 ITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQD 464

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +L  G   +   Y ++I+GLC  G  +EAL   + M  +G  PDA+TY  L       ++
Sbjct: 465 LLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNK 524

Query: 184 ISGAWKVIQKLLIKGSD 200
              A K++++++ + SD
Sbjct: 525 NGKAVKLLREMIARESD 541


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 148/535 (27%), Positives = 269/535 (50%), Gaps = 36/535 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y+    V DAV    ++  +     +  +N LL +L   +H   +  L   + +S    N
Sbjct: 44  YNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPN 103

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT +I+I+ LC  +R  D + F     GK                              
Sbjct: 104 VYTLTILINCLCHSNR--DHVHFAFSALGK------------------------------ 131

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K GL P   ++  L++GLC    + +A++  +++G+ G  P  ITY+ + KG   + 
Sbjct: 132 -MFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIG 190

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
             + A ++++K+  KG  PD+V Y  +I   C+     E +     M+ QG   NV+ YS
Sbjct: 191 HTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYS 250

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +L   C  G+++EA  L  +M    + P+ VT++IL+ GLCK+  + +A +++  M   
Sbjct: 251 SILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTEN 310

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+++ + A++ G C +  + EA+  FD ++       V +YNI+I+G+ K   + EA
Sbjct: 311 GVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEA 370

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L  ++ ++ ++P  VT+++L+ GFC+ G+   A++L   +  +GL P ++TY+  ++ 
Sbjct: 371 KTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDG 430

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+ G++     LL+ M+   I P    Y ++I+G+C   KL+ A +L  +++V G+ P 
Sbjct: 431 LCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPS 490

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
            +TY  +I    K     +A ++  +M ++   P S TYN+ I G   NGD  NA
Sbjct: 491 VVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNA 545



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 225/459 (49%), Gaps = 17/459 (3%)

Query: 201 PDIVTYTVLICGYCQIG--NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
           P++ T T+LI   C     +V         M   G +   + +  LL+ +C   +I +A+
Sbjct: 102 PNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAV 161

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L  E+  +G  P L+TY+ +I+GLCK      A+QL  +M  K   P+  A+  ++  L
Sbjct: 162 KLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSL 221

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C+     EA  +F  ++      +VV Y+ ++ G+  LG + EA  L++Q+I + + P+ 
Sbjct: 222 CKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNT 281

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VTF  L+ G CK G + +ARR+ + +  +G+EP A TY+  M+ YC +  +     L   
Sbjct: 282 VTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDI 341

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M  K   P+   Y ++I G CK  +L EA  LL +MY   +TPD +TY+T+++ FC+   
Sbjct: 342 MVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGR 401

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
            + A +L  +M  + L P S TY+IL+DGLC +G L  A  LL ++QE  I      Y  
Sbjct: 402 PQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNI 461

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNG 603
           +I+  C  G +  A   F  +  KG + S+  YT                  F  M+ NG
Sbjct: 462 LIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNG 521

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             P+     V +  F + GD  +   L   M+  G   D
Sbjct: 522 CLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSAD 560



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 226/436 (51%), Gaps = 1/436 (0%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           K+   P +V T   +++GLC ++++ DA+    E     F PS+++   I+   CK+G  
Sbjct: 134 KLGLQPTHV-TFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHT 192

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
             A  L   M + G  PD  +YN +I  LC      EA+ F ++M   G+ P+ +TYS +
Sbjct: 193 TNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSI 252

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             GF  L Q++ A  + ++++ +   P+ VT+T+L+ G C+ G + E  ++ E+M   G 
Sbjct: 253 LHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGV 312

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           + +   YS L+   C   ++DEA  L   M   G  P +  Y+ILI G CK  ++++A  
Sbjct: 313 EPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKT 372

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L +EM  + ++P++  +  ++ G C+      A+  F  +     + D + Y+I++DG  
Sbjct: 373 LLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLC 432

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K G++ EA +L + + E +I P I  +N LI G C  GK+  AR L   + + G++PS V
Sbjct: 433 KHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVV 492

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TYT  ++   +EG       + ++M      P   TY V I+G  +      AV+L+E+M
Sbjct: 493 TYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEM 552

Query: 475 YVIGVTPDQITYNTII 490
              G + D  T+  ++
Sbjct: 553 VGRGFSADSSTFQMLL 568



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 212/423 (50%), Gaps = 3/423 (0%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DAV +  ++ ++    S+ TY +++  L    HT     L   ++      +V   + VI
Sbjct: 159 DAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVI 218

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           D LC+  R  +A+ F  E   +   P+VV+ ++I+  +C LG    A  LF  M+   + 
Sbjct: 219 DSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVM 278

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  ++ IL+ GLC  G + EA      M  +GVEPDA TYS L  G+ L SQ+  A K+
Sbjct: 279 PNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKL 338

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              ++ KG  P +  Y +LI G+C+   + E   L   M  +    + + YS L+   C+
Sbjct: 339 FDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQ 398

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           +GR   A  L  EM + GL PD +TYSIL+ GLCK   + +A +L   M   +I P+   
Sbjct: 399 AGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICI 458

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G+C    +  AR  F +L +      VV Y +MI G +K G   EA +++R+++
Sbjct: 459 YNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMV 518

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
                P+  T+N  I GF +NG  ++A RL++ +   G    + T+   ++    +  I 
Sbjct: 519 VNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLESNDEIIS 578

Query: 431 RLL 433
           R +
Sbjct: 579 RFM 581



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 147/343 (42%), Gaps = 22/343 (6%)

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +  ISP+S  +G           + +A   F+ L+    +  VV++N ++   VK  +  
Sbjct: 27  TTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYS 86

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK--VADARRLLDTIKLHGLEPSAVTYTT 418
             + L +Q+    I P++ T   LI   C + +  V  A   L  +   GL+P+ VT+ T
Sbjct: 87  TVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGT 146

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +N  C +  I   + L  E+      P+ +TYT +IKGLCK      A+QLL+ M   G
Sbjct: 147 LLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKG 206

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
             PD + YNT+I S CK +   +A    ++M    + P   TY+ ++ G C  G L  A 
Sbjct: 207 CKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEAT 266

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            L   +   N+    V +T ++   C EG + +A                    +  F M
Sbjct: 267 SLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEA--------------------RRVFEM 306

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           M  NG  PD      ++  +     +    +L  +M+  G  P
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAP 349


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 142/453 (31%), Positives = 245/453 (54%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P A  +  ++  L  A   + AL  +  M  +G++PD IT ++L   F  L  I  ++ V
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
             K+L KG  PD VT+T+LI G C  G V + L   + +++QGF+L+ ++Y  L++ +C+
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G    A+ LL  ++   ++P++V YS +I  +CK   V+ A  LY EM SKRISP+   
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + +++ G C    +  A   F+ +I  N   +V  ++I+IDG+ K G + EA  +   ++
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           +K +   +VT+NSL+ G+C   +V  A+ L + +   G+ P   +Y+  +N +C+   + 
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             + L +EM  K I P  VTY  ++ GLCK  +   A++L+++M+  G   + ITYN+I+
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSIL 415

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
            + CK   + KA  LL ++    ++P   TY +LI+GLC  G L +A  +   L     S
Sbjct: 416 DAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYS 475

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
                YT++I   C +G   + +    +M + G
Sbjct: 476 PNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNG 508



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 259/473 (54%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++  L +  + Q A+   Q+       P  ++ N +M+ + +LG  + +  +F  +LK G
Sbjct: 64  ILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKG 123

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
            HPDA ++ ILI GLC+ G + +AL F + +   G + D ++Y  L  G   + +   A 
Sbjct: 124 YHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAV 183

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++++++  K   P++V Y+ +I   C+   V +   L   M+S+    +V+ YS L+S  
Sbjct: 184 QLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGF 243

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C  G++  A+ L   M +  + P++ T+SILI G CK+ KV +A  +   M  K +  + 
Sbjct: 244 CVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDV 303

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             + +++ G C  + + +A+  F+ +       DV  Y+IMI+G+ K+  + EA++L+ +
Sbjct: 304 VTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEE 363

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  K+I P++VT+NSL+ G CK+G+ + A  L+D +   G   + +TY + ++A C+  +
Sbjct: 364 MHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNH 423

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           + + + LL +++ K I P   TYTV+I GLCK  +L +A ++ ED+ V G +P+  TY +
Sbjct: 424 VDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTS 483

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +I  FC      +   +L++M  +   P + TY ILI  L    +   A+ LL
Sbjct: 484 LINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLL 536



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 229/439 (52%)

Query: 41  LRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVS 100
           L H    + ++  I       +  T +I+I GLC +  +  A+ F  +   + F    VS
Sbjct: 106 LGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVS 165

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
              +++  C++G  + A  L   +    + P+   Y+ +I  +C    + +A +   +M 
Sbjct: 166 YGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMV 225

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
              + PD +TYS L  GF ++ ++  A  +  +++    +P++ T+++LI G+C+ G V 
Sbjct: 226 SKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVR 285

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
           E   +  VM+ +  KL+V+ Y+ L+   C   ++++A  L   M   G+ PD+ +YSI+I
Sbjct: 286 EAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMI 345

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
            G CK   V +A++L+ EM  K+I PN   + +++ GLC+    + A    D +      
Sbjct: 346 NGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQP 405

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            +++ YN ++D   K  ++ +A+ L  ++ EK I P I T+  LI G CK G++ DA+++
Sbjct: 406 SNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKV 465

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            + + + G  P+  TYT+ +N +C +G     LA+L +M+     P  +TY ++I  L +
Sbjct: 466 FEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFE 525

Query: 461 QWKLQEAVQLLEDMYVIGV 479
           + +  +A +LL +M   G+
Sbjct: 526 KDENDKAEKLLREMIARGL 544



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 15/297 (5%)

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           +N I   + +  ++   +K      A+ L +Q+    I P  +T N L+  F + G +  
Sbjct: 52  NNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKF 111

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           +  +   I   G  P AVT+T  +   C +G + + L    ++  +      V+Y  +I 
Sbjct: 112 SFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLIN 171

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLC+  + + AVQLL  +    V P+ + Y+TII S CK K +  AF L  +M    + P
Sbjct: 172 GLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISP 231

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              TY+ LI G CV G LK A  L   +   NI+     ++ +I   C EG V +A    
Sbjct: 232 DVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVL 291

Query: 577 CQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAF 618
             M++K  ++ +  Y                KS F +M   G  PD     +M+  F
Sbjct: 292 AVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGF 348



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 127/279 (45%), Gaps = 21/279 (7%)

Query: 365 LYRQLIEKRIS-PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           L+ +L+ K    P  + F  ++    K  +   A  L   ++ +G++P  +T    MN +
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            + G+I+   ++  ++  K   P  VT+T++IKGLC + ++ +A+   + +   G   DQ
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           ++Y T+I   C+  + + A QLL ++    + P    Y+ +ID +C +  + +A  L   
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           +    IS   V Y+++I   C  G +  A+  F +M+                    S+ 
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMI--------------------SDN 263

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             P+     +++  F + G +     + AVM+K  +  D
Sbjct: 264 INPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLD 302


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 157/536 (29%), Positives = 261/536 (48%), Gaps = 25/536 (4%)

Query: 66  NSIVIDGLCQQSRLQ---------DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           +SI    +C + RL+         DAI   QE       P +V      SR+    F+ +
Sbjct: 47  SSITNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDF----SRF----FSAI 98

Query: 117 AKGL-------FCLMLKY-GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           A+         FC  L+  G+  + ++ NI+I+  C       A      + + G EPD 
Sbjct: 99  ARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDT 158

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
            T++ L  G  L  ++S A  ++ +++  G  PD+VTY  ++ G C+ G+      +   
Sbjct: 159 TTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRK 218

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M  +  K +V  YS ++ S+C+ G ID A+ L  EME  G+K  +VTY+ L+RGLCK  K
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
            +    L  +M S+ I PN      +L    ++  + EA   +  +I      +++ YN 
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           ++DGY     + EA  +   ++  + SP IVTF SLI G+C   +V D  ++   I   G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L  +AVTY+  +  +C+ G I+    L QEM +  + P  +TY +++ GLC   KL++A+
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           ++ ED+    +    + Y TII   CK   +  A+ L   +    ++P   TY ++I GL
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           C  G L  A+ LL  ++E   +     Y T+I+AH  +GD+  +     +M   GF
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 154/602 (25%), Positives = 269/602 (44%), Gaps = 62/602 (10%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK- 118
           P  + T ++  D LC  S       FL  +  ++F  S+ + N       + G  ++ K 
Sbjct: 19  PHLLKTGTLRTDLLCTISS------FLS-SCERDF-SSITNGNVCFRERLRSGIVDIKKD 70

Query: 119 ---GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
               LF  M++    P    ++     +         L+F   +  +G+  +  T +I+ 
Sbjct: 71  DAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
             F    +   A+ V+ K++  G +PD  T+  LI G C  G V + + L + M+  G +
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQ 190

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +++ Y+ +++ +C+SG    A  +L +ME   +K D+ TYS +I  LC+   +  AI L
Sbjct: 191 PDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           + EM +K I  +                                   VV YN ++ G  K
Sbjct: 251 FKEMETKGIKSS-----------------------------------VVTYNSLVRGLCK 275

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G   +   L + ++ + I P+++TFN L+  F K GK+ +A  L   +   G+ P+ +T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y T M+ YC +  +     +L  M      P  VT+T +IKG C   ++ + +++  ++ 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G+  + +TY+ +++ FC+   ++ A +L  +M  H + P   TY IL+DGLC NG L+
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK-- 593
            A  +   LQ+  + L  V YTTII+  C  G V  A   FC +  KG + ++  YT   
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 594 SFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           S  C              M  +G  P+      ++ A  + GDL +  +L   M   G  
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

Query: 641 PD 642
            D
Sbjct: 576 AD 577



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 43/212 (20%), Positives = 74/212 (34%), Gaps = 55/212 (25%)

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           +AL QEM      P  V ++     + +  +    +   + + + G+  +  T N +I  
Sbjct: 73  IALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINC 132

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
           FC+C     A+ +L ++     EP + T+N LI+GLC+                      
Sbjct: 133 FCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCL---------------------- 170

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE 612
                        EG V KA+    +MVE                    NG  PD     
Sbjct: 171 -------------EGKVSKAVVLVDRMVE--------------------NGCQPDMVTYN 197

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
            ++    + GD    F++   M +  +  D F
Sbjct: 198 SIVNGICRSGDTSLAFDMLRKMEERNVKADVF 229


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 240/455 (52%), Gaps = 1/455 (0%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+ +++ +++   C  G + +  +    M  +G+ PD I Y+IL  G+    ++  A ++
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
            ++++  G +P I TY  L+  +C+   ++E ++L + M  +GF+ +V+ YS ++S +CK
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 251 SGRIDEALGLLY-EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           +G++ EAL +L+ +M   G   + V Y+ LI GLCK + + +A +L  EM SK   P++ 
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            +  IL GLC    ++EA+ +FDS+       DVV YN ++D   K G   EA++L++ +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           I K   P  VT+NS++ G  +   + +A  +   +   G  P+  TY+  ++ +C    +
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
                +L+EM      P  VTY +++ GLCK   + +A +L   M   G  PD ++Y+ +
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           +   CK   +  A  L ++M    L P   T+NIL+DGLC  G L  A  LL  +     
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGC 425

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +   VAY T++     +G   +A      M EKGF
Sbjct: 426 APDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 460



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 238/456 (52%), Gaps = 1/456 (0%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           +E  P+  +   ++  +CK G       LF  ML  G+ PD   YNILI G    G ++E
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A     +M   G+EP   TY+ L   F   +++  A ++ + +  KG +PD+VTY+ +I 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 212 GYCQIGNVEEGLK-LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
           G C+ G V E L+ L   M+ +G   N +AY+ L++ +CK   I+ A  LL EM + G  
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD +TY+ ++ GLC+  KV +A Q ++ M S+  SP+  A+  +L  L ++    EA   
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           F  +I    + D V YN ++ G  +  N+ EA +++++++    +P+  T++ ++ G C+
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
             KV DA ++L+ +   G  P  VTY   ++  C+   + +   L   M      P  V+
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 361

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y+VV+ GLCK  K+ +A  L + M    + PD +T+N ++   CK   L +A  LL+QM 
Sbjct: 362 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMT 421

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
                P    YN L++GL   G    AD L  +++E
Sbjct: 422 CSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 457



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 227/441 (51%), Gaps = 1/441 (0%)

Query: 56  VSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
           + E   N YT  +V+   C+Q +L+D     ++       P  +  N ++  Y K G  +
Sbjct: 1   MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVD 60

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            A  L+  M+  GL P  ++YN L++  C    M+EA+E    M   G EPD +TYS + 
Sbjct: 61  EANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTII 120

Query: 176 KGFHLLSQISGAWKVI-QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
            G     +++ A +++  K++ +G   + V Y  LI G C+  N+E   KL E M S+G+
Sbjct: 121 SGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY 180

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             + I Y+ +LS +C+ G++ EA      M + G  PD+V Y+ L+  L K+ K  +A++
Sbjct: 181 VPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMK 240

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L+ ++ +K   P++  + +ILLGL  K  + EA   F  ++ S C  +   Y+I++ G+ 
Sbjct: 241 LFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHC 300

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           +   + +A ++  ++ +    P +VT+N L+ G CK   V  A  L  T+  +G  P  V
Sbjct: 301 RAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIV 360

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           +Y+  +N  C+   +     L   M  + + P  VT+ +++ GLCK  KL EA  LL+ M
Sbjct: 361 SYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQM 420

Query: 475 YVIGVTPDQITYNTIIRSFCK 495
              G  PD + YNT++    K
Sbjct: 421 TCSGCAPDYVAYNTLMNGLRK 441



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 225/440 (51%), Gaps = 33/440 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y++ G V +A  +  +M  + L+ SI TYNSLL                           
Sbjct: 53  YAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLL--------------------------- 85

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEVAKGLFCLM 124
                +  C+++++++A+   +  A K F P VV+ + I+S  CK G   E  + LF  M
Sbjct: 86  -----NAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKM 140

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G   +  +YN LI+GLC   ++E A +   +M   G  PD ITY+ +  G   + ++
Sbjct: 141 IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKV 200

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           S A +    +  +G  PD+V Y  L+    + G  +E +KL + ++++G+  + + Y+ +
Sbjct: 201 SEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSI 260

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L  + +   +DEA  +  +M A G  P+  TYSI++ G C+  KV  A ++  EM     
Sbjct: 261 LLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGA 320

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+   +  +L GLC+  ++ +A   F +++ + C  D+V Y+++++G  K   + +A  
Sbjct: 321 VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARV 380

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+ ++IE+++ P +VTFN L+ G CK GK+ +A+ LLD +   G  P  V Y T MN   
Sbjct: 381 LFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLR 440

Query: 425 EEGNIQRLLALLQEMETKAI 444
           ++G   +   L Q M+ K  
Sbjct: 441 KQGRHIQADRLTQAMKEKGF 460



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 199/427 (46%), Gaps = 16/427 (3%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N   + V+L S CK G++ +   L  +M   G+ PD + Y+ILI G  K+ +V +A +LY
Sbjct: 7   NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM S  + P+ + + ++L   C++  + EA   F ++       DVV Y+ +I G  K 
Sbjct: 67  EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKT 126

Query: 357 GNIGEAVQ-LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           G + EA++ L+ ++IE+  S + V +N+LI G CK+  +  A +LL+ +   G  P  +T
Sbjct: 127 GKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNIT 186

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y T ++  C  G +         M ++   P  V Y  ++  L K+ K  EA++L +D+ 
Sbjct: 187 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVI 246

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G  PD +TYN+I+    +  ++ +A ++  +M      P  ATY+I++ G C    + 
Sbjct: 247 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVD 306

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT--- 592
           +A  +L  + +       V Y  ++   C    V KA   F  MV+ G    I  Y+   
Sbjct: 307 DAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVL 366

Query: 593 ------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                       +  F  M+     PD     +++    + G L    +L   M  SG  
Sbjct: 367 NGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCA 426

Query: 641 PDKFLIN 647
           PD    N
Sbjct: 427 PDYVAYN 433



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 162/357 (45%), Gaps = 16/357 (4%)

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +  SPN +    +L   C++  + +    F+ ++ +    D + YNI+IDGY K G + E
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +LY +++   + PSI T+NSL+  FCK  K+ +A  L  T+   G EP  VTY+T ++
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 422 AYCEEGNIQRLLALL-QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             C+ G +   L +L  +M  +      V Y  +I GLCK   ++ A +LLE+M   G  
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD ITYNTI+   C+   + +A Q  + M      P    YN L+D L   G    A  L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT--KSFFCM 598
              +         V Y +I+     + ++ +A   F +MV  G   +   Y+   S  C 
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 599 -------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                        M   G  PD     ++L    +   +    EL + M+ +G  PD
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 358



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 159/323 (49%), Gaps = 16/323 (4%)

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
           M  C  +   + +++  + K G + +  +L+ Q+++  ISP  + +N LI G+ K G+V 
Sbjct: 1   MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVD 60

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A RL + +   GLEPS  TY + +NA+C+E  ++  + L + M  K   P  VTY+ +I
Sbjct: 61  EANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTII 120

Query: 456 KGLCKQWKLQEAVQLL-EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
            GLCK  K+ EA+++L   M   G + + + YN +I   CK +++ +A++LL +M     
Sbjct: 121 SGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY 180

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P + TYN ++ GLC  G +  A     S+     S   VAY  ++ A   EG   +AM 
Sbjct: 181 VPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMK 240

Query: 575 FFCQMVEKGF---------------EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
            F  ++ KG+                 S  D  +  F  M+++G  P+     ++L    
Sbjct: 241 LFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHC 300

Query: 620 QGGDLGSVFELAAVMIKSGLLPD 642
           +   +    ++   M K G +PD
Sbjct: 301 RAKKVDDAHKVLEEMSKIGAVPD 323



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 159/342 (46%), Gaps = 41/342 (11%)

Query: 8   RTGMVHDAV-FVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSE-TPRN 62
           +TG V +A+  +  KM E     +   YN+L+  L    + +  + L +++      P N
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           +  N+I + GLC+  ++ +A  F      + + P VV+ N ++    K G  + A  LF 
Sbjct: 185 ITYNTI-LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ++  G  PD  +YN ++ GL    +M+EA E    M   G  P+  TYSI+  G     
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK 303

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A KV++++   G+ PD+VTY +L+ G C+   V++  +L   M+  G   ++++YS
Sbjct: 304 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 363

Query: 243 V-----------------------------------LLSSMCKSGRIDEALGLLYEMEAV 267
           V                                   L+  +CK+G++DEA  LL +M   
Sbjct: 364 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCS 423

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           G  PD V Y+ L+ GL KQ +  +A +L   M  K    + F
Sbjct: 424 GCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 151/524 (28%), Positives = 256/524 (48%), Gaps = 2/524 (0%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L +A+        K+  PS V  N +++   K         L   M  +G+ PD ++  I
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           +I+ LC    ++ A      + + G +PDA T++ L +G  +  +I  A  +  K++ +G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P++VTY  LI G C++GN    ++L   M     + NV+ +S L+ S+CK  ++ EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +  EM   G+ P++VTY+ LI GLCK  +      L NEM   +I P+ F    ++  L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++ M+ EA    D +I      +VV YN ++DG+     +  AV+++  ++ K    ++
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           +++N+LI G+CK   V  A  L + +    L P+ VTY T ++  C  G +Q  ++L  E
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M  +   P  VTY  +   LCK   L +A+ LL+ +      PD   Y TI+   C+  +
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L  A  L + +    L+P   TYNI+I GLC  G L  A  L   + ++  S     Y  
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
           I +      +  + +    +M+ +GF + +   T +    MLS+
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVS--TTTLLVGMLSD 572



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 240/484 (49%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           S N   S+       + A   F  ML     P    +N L+  +         L  +  M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              G+ PD  T +I+      L+++  A+  + K+L  G  PD  T+T LI G C  G +
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            E L L + M+ +GF+ NV+ Y  L++ +CK G    A+ LL  ME    +P++V +S L
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I  LCK  +V +A  +++EM +K ISPN   + +++ GLC+           + ++ S  
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           + DV   N ++D   K G + EA  +   +I + + P++VT+N+L+ G C   +V  A +
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           + DT+       + ++Y T +N YC+  ++ + + L +EM  + + P  VTY  +I GLC
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
              +LQ+A+ L  +M   G  PD +TY T+    CK + L KA  LL  +   N +P   
Sbjct: 397 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            Y  ++DG+C  G+L++A  L  +L    +      Y  +I   C +G + +A   F +M
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516

Query: 580 VEKG 583
            + G
Sbjct: 517 NKNG 520



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 224/473 (47%), Gaps = 21/473 (4%)

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
           +K  H  + +  A     ++L K   P  V +  L+    +  +    L L   M S G 
Sbjct: 43  SKPLHF-NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGI 101

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             +V   +++++S+C   R+D A   L ++  +G +PD  T++ LIRGLC + K+ +A+ 
Sbjct: 102 PPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALH 161

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L+++M  +   PN   +G ++ GLC+    + A     S+   NC  +VV+++ +ID   
Sbjct: 162 LFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLC 221

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K   + EA  ++ ++I K ISP+IVT+NSLI+G CK  +      L++ +    + P   
Sbjct: 222 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVF 281

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           T  T ++A C+EG +     ++  M  + + P  VTY  ++ G C + ++  AV++ + M
Sbjct: 282 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
                  + I+YNT+I  +CK + + KA  L  +M    L P + TYN LI GLC  G L
Sbjct: 342 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 401

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
           ++A  L   +         V Y T+    C    + KAM        K  E S  D    
Sbjct: 402 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL-----KAIEGSNWD---- 452

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                      PD +I   +L    + G+L    +L + +   GL P+ +  N
Sbjct: 453 -----------PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYN 494



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 142/298 (47%), Gaps = 32/298 (10%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + GMV +A  V+  M    ++ ++ TYN+L+                             
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALM----------------------------- 322

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
              DG C ++ +  A+        K+   +V+S N +++ YCK+   + A  LF  M + 
Sbjct: 323 ---DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 379

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            L P+  +YN LIHGLC  G +++A+   ++M   G  PD +TY  L+        +  A
Sbjct: 380 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKA 439

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             +++ +     DPDI  YT ++ G C+ G +E+   L   + S+G + NV  Y++++  
Sbjct: 440 MALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHG 499

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           +CK G + EA  L  EM   G  P+  TY+++ RG  + ++  + I+L  EM ++  S
Sbjct: 500 LCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS 557



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 3/241 (1%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           AV V   M   D   ++ +YN+L+     ++  D    L++++   E   N  T + +I 
Sbjct: 334 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIH 393

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           GLC   RLQDAI    E   +   P +V+   +    CK    + A  L   +      P
Sbjct: 394 GLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDP 453

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D   Y  ++ G+C AG +E+A +  +++   G++P+  TY+I+  G      ++ A K+ 
Sbjct: 454 DIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLF 513

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            ++   G  P+  TY ++  G+ +       ++L E ML++GF ++V   ++L+  +   
Sbjct: 514 SEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDD 573

Query: 252 G 252
           G
Sbjct: 574 G 574


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 275/525 (52%), Gaps = 3/525 (0%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           + DA+ +   M +     SI  +N LL     ++  D++  L + ++  E    +YT +I
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+  C++S++  A+  L +     + PS+V+L+++++ YC       A  L   M++ G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  ++  LIHGL +     EA+   + M + G +P+ +TY ++  G         A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            ++ K+     + D+V +  +I   C+  +V++ L L + M ++G + NV+ YS L+S +
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C  GR  +A  LL +M    + P+LVT++ LI    K+ K  +A +LY++M  + I P+ 
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F + +++ G C  + + +A+  F+ ++  +C  DVV YN +I G+ K   + +  +L+R+
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  + +    VT+ +LI G   +G   +A+++   +   G+ P  +TY+  ++  C  G 
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +++ L +   M+   I      YT +I+G+CK  K+ +   L   + + GV P+ +TYNT
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           +I   C  + L++A+ LL +M      P S TYN LI     +GD
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 254/489 (51%), Gaps = 1/489 (0%)

Query: 81  DAILFLQETAGK-EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
           D ++ L E   + E    + + N +++ +C+     +A  L   M+K G  P   + + L
Sbjct: 102 DVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 161

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           ++G C    + +A+   + M   G  PD IT++ L  G  L ++ S A  ++ +++ +G 
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            P++VTY V++ G C+ G+ +  L L   M +   + +V+ ++ ++ S+CK   +D+AL 
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           L  EME  G++P++VTYS LI  LC   +   A QL ++M  K+I+PN     A++    
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           ++    EA   +D +I  +   D+  YN +++G+     + +A Q++  ++ K   P +V
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T+N+LI GFCK+ +V D   L   +   GL    VTYTT +     +G+      + ++M
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
            +  + P  +TY++++ GLC   KL++A+++ + M    +  D   Y T+I   CK   +
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 521

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
              + L   + L  ++P   TYN +I GLC    L+ A  LL  ++E         Y T+
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581

Query: 560 IKAHCAEGD 568
           I+AH  +GD
Sbjct: 582 IRAHLRDGD 590



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 155/515 (30%), Positives = 247/515 (47%), Gaps = 35/515 (6%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +L DAI            PS+V  N ++S   K+   +V   L   M +  +    ++YN
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           ILI+  C    +  AL     M + G EP  +T S L  G+    +IS A  ++ +++  
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  PD +T+T LI G        E + L + M+ +G + N++ Y V+++ +CK G  D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L LL +MEA  ++ D+V ++ +I  LCK   V  A+ L+ EM +K I PN          
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN---------- 294

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
                                    VV Y+ +I      G   +A QL   +IEK+I+P+
Sbjct: 295 -------------------------VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           +VTFN+LI  F K GK  +A +L D +    ++P   TY + +N +C    + +   + +
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            M +K   P  VTY  +IKG CK  ++++  +L  +M   G+  D +TY T+I+      
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
           D   A ++  QM    + P   TY+IL+DGLC NG L+ A  +   +Q+  I L    YT
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           T+I+  C  G V      FC +  KG + ++  Y 
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 213/439 (48%), Gaps = 3/439 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y     + DAV ++ +M E+  +    T+ +L++ L           L D +       N
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T  +V++GLC++     A+  L +    +    VV  N I+   CK    + A  LF 
Sbjct: 225 LVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 284

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G+ P+  +Y+ LI  LC  G   +A +  +DM    + P+ +T++ L   F    
Sbjct: 285 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 344

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A K+   ++ +  DPDI TY  L+ G+C    +++  ++ E M+S+    +V+ Y+
Sbjct: 345 KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 404

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   CKS R+++   L  EM   GL  D VTY+ LI+GL        A +++ +M S 
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   +  +L GLC    + +A   FD +  S    D+ +Y  MI+G  K G + + 
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L+  L  K + P++VT+N++I G C    + +A  LL  +K  G  P++ TY T + A
Sbjct: 525 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584

Query: 423 YCEEGNIQRLLALLQEMET 441
           +  +G+      L++EM +
Sbjct: 585 HLRDGDKAASAELIREMRS 603



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 194/468 (41%), Gaps = 29/468 (6%)

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           ++ + L    +P I   ++ +CG C  G              + F      Y  +L +  
Sbjct: 16  IVHRNLQGKGNPRIAPSSIDLCGMCYWG--------------RAFSSGSGDYREILRNGL 61

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
              ++D+A+GL   M      P +V ++ L+  + K  K    I L  +M    I    +
Sbjct: 62  HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 121

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            +  ++   C +  I+ A      ++       +V  + +++GY     I +AV L  Q+
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           +E    P  +TF +LI+G   + K ++A  L+D +   G +P+ VTY   +N  C+ G+ 
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
              L LL +ME   I    V +  +I  LCK   + +A+ L ++M   G+ P+ +TY+++
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I   C       A QLL+ M    + P   T+N LID     G    A+ L   + + +I
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTKS-------- 594
                 Y +++   C    + KA   F  MV K        +   I+ + KS        
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            F  M   G   D      ++      GD  +  ++   M+  G+ PD
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 148/323 (45%), Gaps = 9/323 (2%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTN 66
           G   DA  +++ M E  +  ++ T+N+L+          +   LYDD+       +++T 
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +++G C   RL  A    +    K+  P VV+ N ++  +CK    E    LF  M  
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL  D  +Y  LI GL   G  + A +    M   GV PD +TYSIL  G     ++  
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 488

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +V   +       DI  YT +I G C+ G V++G  L   +  +G K NV+ Y+ ++S
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C    + EA  LL +M+  G  P+  TY+ LIR   +      + +L  EM S R   
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR--- 605

Query: 307 NSFAHGAILLGLCEKEMITEARM 329
             F   A  +GL    M+ + R+
Sbjct: 606 --FVGDASTIGLVA-NMLHDGRL 625


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 275/525 (52%), Gaps = 3/525 (0%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           + DA+ +   M +     SI  +N LL     ++  D++  L + ++  E    +YT +I
Sbjct: 28  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+  C++S++  A+  L +     + PS+V+L+++++ YC       A  L   M++ G
Sbjct: 88  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  ++  LIHGL +     EA+   + M + G +P+ +TY ++  G         A 
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            ++ K+     + D+V +  +I   C+  +V++ L L + M ++G + NV+ YS L+S +
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C  GR  +A  LL +M    + P+LVT++ LI    K+ K  +A +LY++M  + I P+ 
Sbjct: 268 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 327

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F + +++ G C  + + +A+  F+ ++  +C  DVV YN +I G+ K   + +  +L+R+
Sbjct: 328 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 387

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  + +    VT+ +LI G   +G   +A+++   +   G+ P  +TY+  ++  C  G 
Sbjct: 388 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 447

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +++ L +   M+   I      YT +I+G+CK  K+ +   L   + + GV P+ +TYNT
Sbjct: 448 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 507

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           +I   C  + L++A+ LL +M      P S TYN LI     +GD
Sbjct: 508 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 552



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 254/489 (51%), Gaps = 1/489 (0%)

Query: 81  DAILFLQETAGK-EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
           D ++ L E   + E    + + N +++ +C+     +A  L   M+K G  P   + + L
Sbjct: 64  DVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 123

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           ++G C    + +A+   + M   G  PD IT++ L  G  L ++ S A  ++ +++ +G 
Sbjct: 124 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 183

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            P++VTY V++ G C+ G+ +  L L   M +   + +V+ ++ ++ S+CK   +D+AL 
Sbjct: 184 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 243

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           L  EME  G++P++VTYS LI  LC   +   A QL ++M  K+I+PN     A++    
Sbjct: 244 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 303

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           ++    EA   +D +I  +   D+  YN +++G+     + +A Q++  ++ K   P +V
Sbjct: 304 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 363

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T+N+LI GFCK+ +V D   L   +   GL    VTYTT +     +G+      + ++M
Sbjct: 364 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 423

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
            +  + P  +TY++++ GLC   KL++A+++ + M    +  D   Y T+I   CK   +
Sbjct: 424 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 483

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
              + L   + L  ++P   TYN +I GLC    L+ A  LL  ++E         Y T+
Sbjct: 484 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 543

Query: 560 IKAHCAEGD 568
           I+AH  +GD
Sbjct: 544 IRAHLRDGD 552



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 155/515 (30%), Positives = 247/515 (47%), Gaps = 35/515 (6%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +L DAI            PS+V  N ++S   K+   +V   L   M +  +    ++YN
Sbjct: 27  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           ILI+  C    +  AL     M + G EP  +T S L  G+    +IS A  ++ +++  
Sbjct: 87  ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  PD +T+T LI G        E + L + M+ +G + N++ Y V+++ +CK G  D A
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L LL +MEA  ++ D+V ++ +I  LCK   V  A+ L+ EM +K I PN          
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN---------- 256

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
                                    VV Y+ +I      G   +A QL   +IEK+I+P+
Sbjct: 257 -------------------------VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 291

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           +VTFN+LI  F K GK  +A +L D +    ++P   TY + +N +C    + +   + +
Sbjct: 292 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 351

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            M +K   P  VTY  +IKG CK  ++++  +L  +M   G+  D +TY T+I+      
Sbjct: 352 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 411

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
           D   A ++  QM    + P   TY+IL+DGLC NG L+ A  +   +Q+  I L    YT
Sbjct: 412 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 471

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           T+I+  C  G V      FC +  KG + ++  Y 
Sbjct: 472 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 506



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 213/439 (48%), Gaps = 3/439 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y     + DAV ++ +M E+  +    T+ +L++ L           L D +       N
Sbjct: 127 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 186

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T  +V++GLC++     A+  L +    +    VV  N I+   CK    + A  LF 
Sbjct: 187 LVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 246

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G+ P+  +Y+ LI  LC  G   +A +  +DM    + P+ +T++ L   F    
Sbjct: 247 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 306

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A K+   ++ +  DPDI TY  L+ G+C    +++  ++ E M+S+    +V+ Y+
Sbjct: 307 KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 366

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   CKS R+++   L  EM   GL  D VTY+ LI+GL        A +++ +M S 
Sbjct: 367 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 426

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   +  +L GLC    + +A   FD +  S    D+ +Y  MI+G  K G + + 
Sbjct: 427 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 486

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L+  L  K + P++VT+N++I G C    + +A  LL  +K  G  P++ TY T + A
Sbjct: 487 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 546

Query: 423 YCEEGNIQRLLALLQEMET 441
           +  +G+      L++EM +
Sbjct: 547 HLRDGDKAASAELIREMRS 565



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 178/417 (42%), Gaps = 15/417 (3%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y  +L +     ++D+A+GL   M      P +V ++ L+  + K  K    I L  +M 
Sbjct: 15  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
              I    + +  ++   C +  I+ A      ++       +V  + +++GY     I 
Sbjct: 75  RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +AV L  Q++E    P  +TF +LI+G   + K ++A  L+D +   G +P+ VTY   +
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N  C+ G+    L LL +ME   I    V +  +I  LCK   + +A+ L ++M   G+ 
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ +TY+++I   C       A QLL+ M    + P   T+N LID     G    A+ L
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 314

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTK 593
              + + +I      Y +++   C    + KA   F  MV K        +   I+ + K
Sbjct: 315 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 374

Query: 594 S--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           S         F  M   G   D      ++      GD  +  ++   M+  G+ PD
Sbjct: 375 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 431



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 148/323 (45%), Gaps = 9/323 (2%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTN 66
           G   DA  +++ M E  +  ++ T+N+L+          +   LYDD+       +++T 
Sbjct: 271 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 330

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +++G C   RL  A    +    K+  P VV+ N ++  +CK    E    LF  M  
Sbjct: 331 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 390

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL  D  +Y  LI GL   G  + A +    M   GV PD +TYSIL  G     ++  
Sbjct: 391 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 450

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +V   +       DI  YT +I G C+ G V++G  L   +  +G K NV+ Y+ ++S
Sbjct: 451 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 510

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C    + EA  LL +M+  G  P+  TY+ LIR   +      + +L  EM S R   
Sbjct: 511 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR--- 567

Query: 307 NSFAHGAILLGLCEKEMITEARM 329
             F   A  +GL    M+ + R+
Sbjct: 568 --FVGDASTIGLVA-NMLHDGRL 587


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 156/536 (29%), Positives = 254/536 (47%), Gaps = 1/536 (0%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           +DL+ + +      +  T S +I+G C+    Q A   L E   +   P     N I+  
Sbjct: 152 YDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKG 211

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
            C  G  + A   +  M +    P   +Y IL+  LC +  + +A     DM   G  P+
Sbjct: 212 LCDNGRVDSALVHYRDMQR-NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPN 270

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            +TY+ L  GF  L  +  A  +  ++L     PD+ TY +LI GYC+    ++G KL +
Sbjct: 271 VVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQ 330

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M+  G + N I Y+ L+ S+ KSG+  +A  L   M     KP   T++++I   CK  
Sbjct: 331 EMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVG 390

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           ++  A +L+  M  +   P+ + +  ++ G C    I +AR   + +  + C  DVV YN
Sbjct: 391 QLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYN 450

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            ++ G  K   + EA ++Y  L        +VT ++LI G CK+ ++ DA +LL  ++ +
Sbjct: 451 SIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERN 510

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G  P  V YT  ++ +C+   + + LA   EM  K   PT +TY++VI  LCK  ++++ 
Sbjct: 511 GSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDG 570

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
             LL+ M   GVTPD I Y ++I   CK     +A++L   M      PT  TYN+L+D 
Sbjct: 571 CMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDK 630

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           LC    L  A  LL  ++        V Y ++        +  KA   F  M  +G
Sbjct: 631 LCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRG 686



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 249/478 (52%), Gaps = 3/478 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           ++  + DA  ++  M E     ++ TYN+L+     L + D    L++ +  +    +V+
Sbjct: 248 KSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVF 307

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I+IDG C+Q R QD    LQE       P+ ++ N +M    K G    A  L  +M
Sbjct: 308 TYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMM 367

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L+    P  F++N++I   C  G ++ A E    M   G  PD  TY+I+  G    ++I
Sbjct: 368 LRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRI 427

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++++++   G  PD+VTY  ++ G C+   V+E  ++ EV+ + G+ L+V+  S L
Sbjct: 428 DDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTL 487

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +CKS R+D+A  LL EME  G  PD+V Y+ILI G CK D++ K++  ++EM  K  
Sbjct: 488 IDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGC 547

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P    +  ++  LC+   + +  M   +++      D ++Y  +IDG  K  +  EA +
Sbjct: 548 VPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYE 607

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           LY+ + +   +P++VT+N L+   CK  ++ +A  LL+ ++  G  P  VTY +  + + 
Sbjct: 608 LYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFW 667

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +     +   L Q M+++   PT   Y++++  L  + K+ +A+++ E+    G   D
Sbjct: 668 KSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVD 725



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 153/558 (27%), Positives = 270/558 (48%), Gaps = 6/558 (1%)

Query: 33  TYNSLLYNL---RHTDIMWDLYDDI-KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
           TY++L+      R     + L D++ K    P N   N+I I GLC   R+  A++  ++
Sbjct: 169 TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTI-IKGLCDNGRVDSALVHYRD 227

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
              +   PSV++   ++   CK      A  +   M++ G  P+  +YN LI+G C  G+
Sbjct: 228 MQ-RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGN 286

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           M+EA+   N M  +   PD  TY+IL  G+    +     K++Q+++  G +P+ +TY  
Sbjct: 287 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNT 346

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           L+    + G   +   L ++ML +  K +   +++++   CK G++D A  L   M   G
Sbjct: 347 LMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG 406

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
             PD+ TY+I+I G C+ +++  A QL   M      P+   + +I+ GLC+   + EA 
Sbjct: 407 CLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAY 466

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             ++ L       DVV  + +IDG  K   + +A +L R++     +P +V +  LI+GF
Sbjct: 467 EVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGF 526

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           CK  ++  +      +   G  P+ +TY+  ++  C+   ++    LL+ M  + + P  
Sbjct: 527 CKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDA 586

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           + YT VI GLCK     EA +L + M   G  P  +TYN ++   CK   L +A  LL  
Sbjct: 587 IVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEV 646

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M      P + TYN + DG   + +   A  L  +++    S T   Y+ ++    AE  
Sbjct: 647 MESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEK 706

Query: 569 VHKAMTFFCQMVEKGFEI 586
           + +AM  + + +E G ++
Sbjct: 707 MDQAMEIWEEALEAGADV 724



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 157/596 (26%), Positives = 276/596 (46%), Gaps = 19/596 (3%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKE-FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           S+V   L Q   L  A+ F     G+  +  S  + N ++S + +   A+ A  LF    
Sbjct: 100 SVVGRVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLF-KNH 158

Query: 126 KYGL-HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           + GL  PD+ +Y+ LI+G C A   ++A    ++M + G+ P    Y+ + KG     ++
Sbjct: 159 RCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRV 218

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  V  + + +   P ++TYT+L+   C+   + +   + E M+  G   NV+ Y+ L
Sbjct: 219 DSAL-VHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTL 277

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++  CK G +DEA+ L  +M      PD+ TY+ILI G CKQ++     +L  EM     
Sbjct: 278 INGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC 337

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   +  ++  L +     +A      ++  +C      +N+MID + K+G +  A +
Sbjct: 338 EPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE 397

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L++ + ++   P I T+N +I G C+  ++ DAR+LL+ +   G  P  VTY + ++  C
Sbjct: 398 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 457

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +   +     + + +         VT + +I GLCK  +L +A +LL +M   G  PD +
Sbjct: 458 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 517

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y  +I  FCK   L K+    ++M      PT  TY+I+ID LC +  +++   LL ++
Sbjct: 518 AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 577

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM---------------VEKGFEISIR 589
            E  ++   + YT++I   C      +A   +  M               V+K  ++S  
Sbjct: 578 LERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRL 637

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           D       +M S+G  PD      +   F +  +    F L   M   G  P  F+
Sbjct: 638 DEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFM 693



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 143/301 (47%), Gaps = 21/301 (6%)

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N ++  +V+     EA  L++       SP  +T+++LI GFCK      A RLLD ++ 
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 195

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+ P    Y T +   C+ G +   L   ++M+ +   P+ +TYT+++  LCK  ++ +
Sbjct: 196 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RNCAPSVITYTILVDALCKSARISD 254

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A  +LEDM   G  P+ +TYNT+I  FCK  ++ +A  L NQM  ++  P   TYNILID
Sbjct: 255 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 314

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           G C     ++   LL  + ++      + Y T++ +                +V+ G  I
Sbjct: 315 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDS----------------LVKSGKYI 358

Query: 587 SIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
              +  +    MML     P      +M+  F + G L   +EL  +M   G LPD +  
Sbjct: 359 DAFNLAQ----MMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTY 414

Query: 647 N 647
           N
Sbjct: 415 N 415


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 149/501 (29%), Positives = 261/501 (52%), Gaps = 17/501 (3%)

Query: 159 MGRH--GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           MGR      PDA +Y+++  G     + S A KV  +++  G  P+ +TY  +I G+ + 
Sbjct: 5   MGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKG 64

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G++E G +LR+ ML  G K N++ Y+VLLS +C++GR+DE   L+ EM +  + PD  TY
Sbjct: 65  GDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTY 124

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           SIL  GL +  +    + L+ E   K +   ++    +L GLC+   + +A    + L+ 
Sbjct: 125 SILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVH 184

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           +  +   V+YN +I+GY ++ ++  A  ++ Q+  + I P  +T+N+LI G CK   V  
Sbjct: 185 TGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTK 244

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  L+  ++  G++PS  T+ T ++AY   G +++   +L +M+ K I    +++  V+K
Sbjct: 245 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVK 304

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
             CK  K+ EAV +L+DM    V P+   YN+II ++ +  D  +AF L+ +M    +  
Sbjct: 305 AFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSA 364

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           +  TYN+L+ GLC +  +  A+ L+ +L+   +    V+Y TII A C +GD  KA+   
Sbjct: 365 SIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELL 424

Query: 577 CQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQG 621
            +M + G   ++R Y                +  +  ML     P   I  +M+ A+ + 
Sbjct: 425 QEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRC 484

Query: 622 GDLGSVFELAAVMIKSGLLPD 642
            +   V  L   M + G+  D
Sbjct: 485 ENDSKVASLKKEMSEKGIAFD 505



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 145/499 (29%), Positives = 256/499 (51%), Gaps = 37/499 (7%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PDAFSYN++I GL  +G   +AL+  ++M   GV P+ ITY+ +  G      +   +++
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ-----GFKLNVI------ 239
             ++L  G  P+IVTY VL+ G C+ G ++E   L + M S      GF  +++      
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 240 ----------------------AY--SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
                                 AY  S+LL+ +CK G++ +A  +L  +   GL P  V 
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G C+   +  A  ++ +M S+ I P+   + A++ GLC+ EM+T+A      + 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            S     V  +N +ID Y   G + +   +   + +K I   +++F S++  FCKNGK+ 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  +LD +    + P+A  Y + ++AY E G+ ++   L+++M+   +  + VTY +++
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           KGLC+  ++ EA +L+  +   G+ PD ++YNTII + C   D  KA +LL +M  + + 
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 433

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           PT  TY+ L+  L   G + + +CL   +   N+  +   Y  ++ A+    +  K  + 
Sbjct: 434 PTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASL 493

Query: 576 FCQMVEKGFEISIRDYTKS 594
             +M EKG  I+  D  +S
Sbjct: 494 KKEMSEKG--IAFDDTKRS 510



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 227/485 (46%), Gaps = 35/485 (7%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P + ++ ++VI GL +  +  DA+    E       P+ ++ N ++  + K G  E    
Sbjct: 13  PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR 72

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   ML  G  P+  +YN+L+ GLC AG M+E     ++M  H + PD  TYSIL  G  
Sbjct: 73  LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +      +  + L KG      T ++L+ G C+ G V +  ++ E+++  G     +
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 192

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L++  C+   +  A  +  +M++  ++PD +TY+ LI GLCK + V KA  L  EM
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 252

Query: 300 CSKRISP-----------------------------------NSFAHGAILLGLCEKEMI 324
               + P                                   +  + G+++   C+   I
Sbjct: 253 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 312

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            EA    D +I  +   +  +YN +ID Y++ G+  +A  L  ++    +S SIVT+N L
Sbjct: 313 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 372

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           + G C++ ++ +A  L+ T++  GL P  V+Y T ++A C +G+  + L LLQEM    I
Sbjct: 373 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 432

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            PT  TY  ++  L    ++ +   L + M    V P    Y  ++ ++ +C++  K   
Sbjct: 433 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 492

Query: 505 LLNQM 509
           L  +M
Sbjct: 493 LKKEM 497



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 20/205 (9%)

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
           A  P   +Y VVI GL +  K  +A+++ ++M  +GV P+ ITYNT+I    K  DL   
Sbjct: 11  APPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAG 70

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
           F+L +QM     +P   TYN+L+ GLC  G +     L+  +  H++      Y+ +   
Sbjct: 71  FRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDG 130

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
               G+    ++ F + ++KG  +       ++ C +L NG   D              G
Sbjct: 131 LTRTGESRTMLSLFAESLKKGVMLG------AYTCSILLNGLCKD--------------G 170

Query: 623 DLGSVFELAAVMIKSGLLPDKFLIN 647
            +    ++  +++ +GL+P   + N
Sbjct: 171 KVAKAEQVLEMLVHTGLVPTTVIYN 195



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 3/177 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPR 61
            + + G + +AV ++  M   D+  + Q YNS++        T+  + L + +K S    
Sbjct: 305 AFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSA 364

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T ++++ GLC+ S++ +A   +     +   P VVS N I+S  C  G  + A  L 
Sbjct: 365 SIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELL 424

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             M KYG+ P   +Y+ L+  L  AG + +       M    VEP +  Y I+   +
Sbjct: 425 QEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 481


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 259/521 (49%), Gaps = 21/521 (4%)

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           ++P    +N++I GLC AG +  AL     M      PD +TY+ L  G     ++  A 
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAV 59

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +V+Q+++     PD  T TV++   C    V++  +L E ML +G   N I YS L+  +
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK  R+DEA+ L+  M   G  P +VTY+ +I G C+  +V +A     +M ++   P+ 
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             + A++ G C+   +         +       D+V Y+ +IDG  K G + +AV ++ +
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 239

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +     +P+ +T+NSLI G+C+ G + +A RLL  +      P  VTYTT M+A+C+ G 
Sbjct: 240 M---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGR 296

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +     L Q+M    + P  VT+T ++ GLC + ++++A++LLE++   G  P   TYN 
Sbjct: 297 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNC 356

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ-EH 547
           ++  +CK   +RKA +L+         P + TYNIL+ G C  G    A   L  L  E 
Sbjct: 357 VVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 416

Query: 548 NISLTKVA-YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM-------- 598
               T VA Y  I+ A C +G    A+ F+ +M+++G+  +   +    F +        
Sbjct: 417 GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQ 476

Query: 599 -------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
                  M+  G  P    C+ ++ A+ + G +    ELA+
Sbjct: 477 AHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELAS 517



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 254/508 (50%), Gaps = 9/508 (1%)

Query: 40  NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVV 99
            LRH   ++   +D      P +  T + ++ GL +  RL+DA+  LQE       P   
Sbjct: 20  RLRHALGVYRQMNDAH----PPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNT 75

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           +L  ++   C     + A+ L   ML  G+  +A +Y+ L+ GLC    ++EA+     M
Sbjct: 76  TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETM 135

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              G  P  +TY+ +  GF    ++  A   +++++ +G  PDI+TYT LI G+C+  +V
Sbjct: 136 AERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDV 195

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
             GL+L   +  +GF  +++ YS ++  +CK+GR+ +A+ +  EM      P  +TY+ L
Sbjct: 196 GRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA---PTAITYNSL 252

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I G C+   + +AI+L  +M   + +P+   +  ++   C+   + +A   F  ++ +  
Sbjct: 253 IGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKL 312

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             DVV +  ++DG    G + +A++L  ++  +   P+I T+N ++ G+CK  +V  A  
Sbjct: 313 SPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEE 372

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK-AIGPTHVT-YTVVIKG 457
           L+   +  G  P+ VTY   +   C  G   + L  L ++ ++    PT V  Y +++  
Sbjct: 373 LVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDA 432

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LC+  +  +AVQ  E+M   G  P   T+ T++ + CK    ++A +LL +M  +   P 
Sbjct: 433 LCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPG 492

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQ 545
             T + ++   C  G ++ AD L   L+
Sbjct: 493 PGTCDAVVSAYCRAGMIQKADELASELR 520



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 251/509 (49%), Gaps = 6/509 (1%)

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           +++VI GLC+  RL+ A+   ++       P  ++   ++    K      A  +   M+
Sbjct: 8   HNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMV 66

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
                PD  +  +++  LC+   +++A E   +M   G+  +AITYS L  G     ++ 
Sbjct: 67  SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 126

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  +++ +  +G  P +VTY  +I G+C+   V+E     E M+++G   ++I Y+ L+
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALI 186

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              CKS  +   L LL E+   G  PD+VTYS +I GLCK  ++  A+ ++ EM     +
Sbjct: 187 GGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCA 243

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P +  + +++ G C    + EA      ++   C  DVV Y  ++  + K+G + +A +L
Sbjct: 244 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYEL 303

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           ++Q++  ++SP +VTF SL+ G C  G++ DA  LL+ I   G  P+  TY   ++ YC+
Sbjct: 304 FQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCK 363

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI-GVTPDQI 484
              +++   L+ +  ++   P  VTY +++ G C+  +  +A+Q L+ +    G  P  +
Sbjct: 364 ANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSV 423

Query: 485 T-YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
             Y  I+ + C+      A Q   +M      P +AT+  ++  LC     + A  LL  
Sbjct: 424 AMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEE 483

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
           + ++  +        ++ A+C  G + KA
Sbjct: 484 MIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 162/339 (47%), Gaps = 24/339 (7%)

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++P +  H  ++ GLC    +  A   +  +  ++   D + Y  ++ G  K   + +AV
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAV 59

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           Q+ ++++  R  P   T   ++   C   +V DAR L++ +   G+  +A+TY+  ++  
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+   +   +AL++ M  +   PT VTY  +I G C+  ++ EA   +E M   G  PD 
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           ITY  +I  FCK +D+ +  +LL ++      P   TY+ +IDGLC  G L++A   +  
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA---VDI 236

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
            +E + + T + Y ++I  +C  GD+ +A+    +MV+      +  YT           
Sbjct: 237 FEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYT----------- 285

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                     ++ AF + G L   +EL   M+ + L PD
Sbjct: 286 ---------TLMSAFCKMGRLDDAYELFQQMVANKLSPD 315



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 156/312 (50%), Gaps = 11/312 (3%)

Query: 31  IQTYNSLLYNLRHTDIMWDLYDDIK-VSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           I TY++++  L     + D  D  + +S  P  +  NS+ I G C+   + +AI  L + 
Sbjct: 214 IVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSL-IGGYCRAGDMDEAIRLLGKM 272

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
              +  P VV+   +MS +CK+G  + A  LF  M+   L PD  ++  L+ GLC  G M
Sbjct: 273 VDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 332

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           E+ALE   ++ R G  P   TY+ +  G+   +Q+  A +++     +G  P+ VTY +L
Sbjct: 333 EDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNIL 392

Query: 210 ICGYCQIGNVEEGLKLREVMLSQG--FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           + G C+ G  ++ L+  + + S+G     +V  Y+++L ++C+ GR D+A+    EM   
Sbjct: 393 VAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQR 452

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI--- 324
           G  P   T++ ++  LCK  +  +A +L  EM     +P      A++   C   MI   
Sbjct: 453 GYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512

Query: 325 ----TEARMYFD 332
               +E R+Y D
Sbjct: 513 DELASELRLYTD 524



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 134/298 (44%), Gaps = 38/298 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           Y R G + +A+ ++ KM +      + TY +L+     +   D  ++L+  +  ++   +
Sbjct: 256 YCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPD 315

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + ++DGLC + R++DA+  L+E   +   P++ + N ++  YCK      A+ L  
Sbjct: 316 VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVA 375

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
                G  P+  +YNIL+ G C AG  ++AL++ + +   G                   
Sbjct: 376 DFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG------------------- 416

Query: 183 QISGAWKVIQKLLIKGSDP-DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
                          G  P  +  Y +++   C+ G  ++ ++  E M+ +G+      +
Sbjct: 417 ---------------GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 461

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           + ++ ++CK+ +  +A  LL EM   G  P   T   ++   C+   + KA +L +E+
Sbjct: 462 ATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 151/524 (28%), Positives = 256/524 (48%), Gaps = 2/524 (0%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L +A+        K+  PS V  N +++   K         L   M  +G+ PD ++  I
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           +I+ LC    ++ A      + + G +PDA T++ L +G  +  +I  A  +  K++ +G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P++VTY  LI G C++GN    ++L   M     + NV+ +S L+ S+CK  ++ EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +  EM   G+ P++VTY+ LI GLCK  +      L NEM   +I P+ F    ++  L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++ M+ EA    D +I      +VV YN ++DG+     +  AV+++  ++ K    ++
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           +++N+LI G+CK   V  A  L + +    L P+ VTY T ++  C  G +Q  ++L  E
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M  +   P  VTY  +   LCK   L +A+ LL+ +      PD   Y TI+   C+  +
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L  A  L + +    L+P   TYNI+I GLC  G L  A  L   + ++  S     Y  
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
           I +      +  + +    +M+ +GF + +   T +    MLS+
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVS--TTTLLVGMLSD 572



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 240/484 (49%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           S N   S+       + A   F  ML     P    +N L+  +         L  +  M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              G+ PD  T +I+      L+++  A+  + K+L  G  PD  T+T LI G C  G +
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            E L L + M+ +GF+ NV+ Y  L++ +CK G    A+ LL  ME    +P++V +S L
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I  LCK  +V +A  +++EM +K ISPN   + +++ GLC+           + ++ S  
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           + DV   N ++D   K G + EA  +   +I + + P++VT+N+L+ G C   +V  A +
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           + DT+       + ++Y T +N YC+  ++ + + L +EM  + + P  VTY  +I GLC
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
              +LQ+A+ L  +M   G  PD +TY T+    CK + L KA  LL  +   N +P   
Sbjct: 397 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            Y  ++DG+C  G+L++A  L  +L    +      Y  +I   C +G + +A   F +M
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516

Query: 580 VEKG 583
            + G
Sbjct: 517 NKNG 520



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 224/473 (47%), Gaps = 21/473 (4%)

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
           +K  H  + +  A     ++L K   P  V +  L+    +  +    L L   M S G 
Sbjct: 43  SKPLHF-NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGI 101

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             +V   +++++S+C   R+D A   L ++  +G +PD  T++ LIRGLC + K+ +A+ 
Sbjct: 102 PPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALH 161

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L+++M  +   PN   +G ++ GLC+    + A     S+   NC  +VV+++ +ID   
Sbjct: 162 LFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLC 221

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K   + EA  ++ ++I K ISP+IVT+NSLI+G CK  +      L++ +    + P   
Sbjct: 222 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVF 281

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           T  T ++A C+EG +     ++  M  + + P  VTY  ++ G C + ++  AV++ + M
Sbjct: 282 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
                  + I+YNT+I  +CK + + KA  L  +M    L P + TYN LI GLC  G L
Sbjct: 342 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 401

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
           ++A  L   +         V Y T+    C    + KAM        K  E S  D    
Sbjct: 402 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL-----KAIEGSNWD---- 452

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                      PD +I   +L    + G+L    +L + +   GL P+ +  N
Sbjct: 453 -----------PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYN 494



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 205/415 (49%), Gaps = 1/415 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T   +I+GLC+      AI  L+        P+VV  + ++   CK      A  +F
Sbjct: 174 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIF 233

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G+ P+  +YN LIHGLC     +      N+M    + PD  T + +       
Sbjct: 234 SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKE 293

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             ++ A  V+  ++ +G +P++VTY  L+ G+C    V+  +K+ + M+ +    NVI+Y
Sbjct: 294 GMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISY 353

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L++  CK   +D+A+ L  EM    L P+ VTY+ LI GLC   ++  AI L++EM +
Sbjct: 354 NTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVA 413

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +   P+   +  +   LC+   + +A     ++  SN   D+ +Y  ++DG  + G + +
Sbjct: 414 RGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELED 473

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+  L  K + P++ T+N +I+G CK G +A+A +L   +  +G  P+  TY     
Sbjct: 474 ARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITR 533

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            +       R + LL+EM  +      V+ T ++ G+     L ++V+ +   YV
Sbjct: 534 GFLRNNEALRTIELLEEMLARGFS-VDVSTTTLLVGMLSDDGLDQSVKQILCKYV 587



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 142/298 (47%), Gaps = 32/298 (10%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + GMV +A  V+  M    ++ ++ TYN+L+                             
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALM----------------------------- 322

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
              DG C ++ +  A+        K+   +V+S N +++ YCK+   + A  LF  M + 
Sbjct: 323 ---DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 379

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            L P+  +YN LIHGLC  G +++A+   ++M   G  PD +TY  L+        +  A
Sbjct: 380 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKA 439

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             +++ +     DPDI  YT ++ G C+ G +E+   L   + S+G + NV  Y++++  
Sbjct: 440 MALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHG 499

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           +CK G + EA  L  EM   G  P+  TY+++ RG  + ++  + I+L  EM ++  S
Sbjct: 500 LCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS 557


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 155/588 (26%), Positives = 275/588 (46%), Gaps = 22/588 (3%)

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           I    +  RL+DA+   +        P+  + NAIM       + + A  ++  ML  G+
Sbjct: 60  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            PD  ++ I +   C+      AL     +   G    A+ Y  +  G +       A +
Sbjct: 120 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQ 175

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNV-EEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +  ++L     P++  +  ++   C+ G+V E GL L +V + +G  +N+  Y++ +  +
Sbjct: 176 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKV-IQRGMSINLFTYNIWIRGL 234

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C++GR+ EA+ L+  M A  + PD+VTY+ LIRGLCK+    +A+     M ++   P+ 
Sbjct: 235 CEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 293

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F +  I+ G C+  M+ EA       +    + D V Y  +I+G    G++  A++L+ +
Sbjct: 294 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 353

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
              K I P IV +NSL+ G C  G +  A ++++ +   G  P   TY   +N  C+ GN
Sbjct: 354 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN 413

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           I     ++ +   K   P   T+  +I G CK+ KL  A+QL+E M+  G+ PD ITYN+
Sbjct: 414 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 473

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           ++   CK   + +  +   +M L    P   TYNILI+  C +  ++ A  ++V + +  
Sbjct: 474 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 533

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------K 593
           +    V++ T+I   C  GD+  A   F ++ EKG+  +   +                +
Sbjct: 534 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 593

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
             F  MLS G   D     V++    +  ++   +     MIK G +P
Sbjct: 594 KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 641



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 160/619 (25%), Positives = 293/619 (47%), Gaps = 35/619 (5%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           Y+R G + DAV    +M       +   YN++   L +  + D    +Y  +  +    +
Sbjct: 63  YARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPD 122

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGK------------------------------ 92
           ++T++I +   C  +R   A+  L+    +                              
Sbjct: 123 LHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLH 182

Query: 93  -EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
               P++ + N ++   CK G    A  L   +++ G+  + F+YNI I GLC AG + E
Sbjct: 183 THVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPE 242

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A+   + M  + V PD +TY+ L +G    S    A   +++++ +G  PD  TY  +I 
Sbjct: 243 AVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIID 301

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           GYC+I  V+E  +L +  + +GF  + + Y  L++ +C  G ++ AL L  E +A G+KP
Sbjct: 302 GYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKP 361

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D+V Y+ L++GLC Q  +  A+Q+ NEM  +   P+   +  ++ GLC+   I++A +  
Sbjct: 362 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 421

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           +  IM   + DV  +N +IDGY K   +  A+QL  ++ E  I+P  +T+NS++ G CK 
Sbjct: 422 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 481

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           GKV +       + L G  P+ +TY   +  +C    ++    ++ +M  + + P  V++
Sbjct: 482 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 541

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             +I G C+   L+ A  L + +   G +    T+NT+I +F    ++  A ++ ++M  
Sbjct: 542 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 601

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
                 S TY +LIDG C   ++  A   LV + +     +   +  +I +      V +
Sbjct: 602 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 661

Query: 572 AMTFFCQMVEKGFEISIRD 590
           A+     MV+ G    + D
Sbjct: 662 AVGIIHIMVKIGVVPEVVD 680



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/544 (27%), Positives = 268/544 (49%), Gaps = 9/544 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           + G V +A  ++ K+ +  + +++ TYN  +  L     + +   L D ++    P +V 
Sbjct: 201 KRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVV 259

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I GLC++S  Q+A+ +L+    +   P   + N I+  YCK+   + A  L    
Sbjct: 260 TYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDA 319

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G  PD  +Y  LI+GLC  G +E ALE  N+    G++PD + Y+ L KG  L   I
Sbjct: 320 VFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLI 379

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +V+ ++  +G  PDI TY ++I G C++GN+ +   +    + +G+  +V  ++ L
Sbjct: 380 LHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL 439

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   CK  ++D AL L+  M   G+ PD +TY+ ++ GLCK  KV++  + + EM  K  
Sbjct: 440 IDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGC 499

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   +  ++   C    + EA      +       D V +N +I G+ + G++  A  
Sbjct: 500 HPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYL 559

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+++L EK  S +  TFN+LI  F     +  A ++ D +   G    + TY   ++  C
Sbjct: 560 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 619

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +  N+ R    L EM  K   P+  T+  VI  L    ++ +AV ++  M  IGV P+ +
Sbjct: 620 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 679

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
             +TI+ +    K    A ++L +  +     +  TY +L +G+  N   +    LL++ 
Sbjct: 680 --DTILNAD---KKEIAAPKILVEDLMKKGHISYPTYEVLHEGVRDNKLTRKHRMLLLNN 734

Query: 545 QEHN 548
             H+
Sbjct: 735 LSHS 738



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 201/442 (45%), Gaps = 25/442 (5%)

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y   I  Y + G + + +   E M          AY+ ++ ++  +   D+A  +   M 
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
           A G+ PDL T++I +R  C   + H A++L   +  +     + A+  ++ GL       
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR----GAVAYCTVVCGLYAHGHTH 171

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +AR  FD ++ ++   ++  +N ++    K G++ EA  L  ++I++ +S ++ T+N  I
Sbjct: 172 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 231

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G C+ G++ +A RL+D ++ + + P  VTY T +   C++   Q  +  L+ M  +   
Sbjct: 232 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 290

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P   TY  +I G CK   +QEA +LL+D    G  PDQ+TY ++I   C   D+ +A +L
Sbjct: 291 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 350

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
            N+     ++P    YN L+ GLC+ G + +A  ++  + E         Y  +I   C 
Sbjct: 351 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 410

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
            G++  A       + KG+                     PD      ++  + +   L 
Sbjct: 411 MGNISDATVVMNDAIMKGYL--------------------PDVFTFNTLIDGYCKRLKLD 450

Query: 626 SVFELAAVMIKSGLLPDKFLIN 647
           S  +L   M + G+ PD    N
Sbjct: 451 SALQLVERMWEYGIAPDTITYN 472



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 6/186 (3%)

Query: 409 LEPSAVT--YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
           L P+ +   Y   + AY   G ++  +   + M+  A  P    Y  ++  L       +
Sbjct: 47  LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 106

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A ++   M   GV+PD  T+   +RSFC       A +LL  +        +  Y  ++ 
Sbjct: 107 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALP----HRGAVAYCTVVC 162

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           GL  +G   +A  L   +   ++     A+  ++ A C  GDV +A     +++++G  I
Sbjct: 163 GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 222

Query: 587 SIRDYT 592
           ++  Y 
Sbjct: 223 NLFTYN 228



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 3/134 (2%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVSE 58
           L + + R G +  A  +  K++E     +  T+N+L+       +  +   ++D++    
Sbjct: 544 LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 603

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              + YT  ++IDG C+ + +  A + L E   K F PS+ +   +++          A 
Sbjct: 604 HRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAV 663

Query: 119 GLFCLMLKYGLHPD 132
           G+  +M+K G+ P+
Sbjct: 664 GIIHIMVKIGVVPE 677


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 151/507 (29%), Positives = 255/507 (50%), Gaps = 2/507 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS V  N +++   K+        L   M  +G+ P+ ++ +ILI+  C    +  A   
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              + + G +PD  T++ L +G ++  +I  A  +  K++ +G  PD+VTY  LI G C+
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +GN    ++L   M+ +  + NV AY+ ++ S+CK  ++ EA  L  EM   G+ PD+ T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI  LC   +      L NEM   +I P+  +   ++  LC++  +TEA    D +I
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 +VV Y  ++DG+  L  + EAV+++  ++ K   P+++++N+LI G+CK  ++ 
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L   +    L P  VTY+T ++  C    +Q  +AL  EM   +  P  VTY +++
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 418

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             LCK   L EA+ LL+ +    + PD    N  I   C+  +L  A  L + +    L+
Sbjct: 419 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 478

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TY+I+I+GLC  G L  A  L   + E+  +L    Y TI +      +  +A+  
Sbjct: 479 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQL 538

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSN 602
             +MV +GF  S    T + F  MLS+
Sbjct: 539 LQEMVARGF--SADASTMTLFVKMLSD 563



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 244/485 (50%)

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
           +S N   S+       + A   F  ML+    P    +N L+  +         L  ++ 
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M   G+ P+  T  IL   F  L+++  A+ V+ K+L  G  PD  T+T LI G    G 
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           + E L L + M+ +GF+ +V+ Y  L++ +CK G    A+ LL  M     +P++  Y+ 
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           +I  LCK  +V +A  L++EM +K ISP+ F + +++  LC            + ++ S 
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
            + DVV +N ++D   K G + EA  +  ++I++ + P++VT+ +L+ G C   ++ +A 
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           ++ DT+   G  P+ ++Y T +N YC+   I + + L  EM  + + P  VTY+ +I GL
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 386

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           C   +LQ+A+ L  +M      P+ +TY  ++   CK + L +A  LL  +   NL+P  
Sbjct: 387 CHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDI 446

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
              NI IDG+C  G+L+ A  L  +L    +      Y+ +I   C  G + +A   F +
Sbjct: 447 QVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFRE 506

Query: 579 MVEKG 583
           M E G
Sbjct: 507 MDENG 511



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/521 (25%), Positives = 247/521 (47%), Gaps = 3/521 (0%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A+    +M  +    S   +N LL +   ++H   +  L   +     P N+YT  I+I+
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
             C  +R+  A   L +       P   +   ++      G    A  LF  M+  G  P
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRP 164

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  +Y  LI+GLC  G+   A+     M +   +P+   Y+ +        Q++ A+ + 
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            +++ KG  PDI TY  LI   C +   +    L   M+      +V++++ ++ ++CK 
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G++ EA  ++ +M   G++P++VTY+ L+ G C   ++ +A+++++ M  K   PN  ++
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++ G C+ + I +A   F  +     I D V Y+ +I G   +  + +A+ L+ +++ 
Sbjct: 345 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 404

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
               P++VT+  L+   CKN  +A+A  LL  I+   L+P        ++  C  G ++ 
Sbjct: 405 CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 464

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              L   + +K + P   TY+++I GLC++  L EA +L  +M   G T +   YNTI R
Sbjct: 465 ARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITR 524

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            F +  +  +A QLL +M        ++T  + +  L  +G
Sbjct: 525 GFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 227/462 (49%), Gaps = 3/462 (0%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVID 71
           A  V+AK+ +L  +    T+ +L+  +     + +   L+D +       +V T   +I+
Sbjct: 115 AFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLIN 174

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           GLC+      AI  L     K   P+V + N I+   CK      A  LF  M+  G+ P
Sbjct: 175 GLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISP 234

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D F+YN LIH LC     +      N+M    + PD ++++ +        +++ A  V+
Sbjct: 235 DIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVV 294

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            K++ +G +P++VTYT L+ G+C +  ++E +K+ + M+ +G   NVI+Y+ L++  CK 
Sbjct: 295 DKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKI 354

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            RID+A+ L  EM    L PD VTYS LI GLC  +++  AI L++EM +    PN   +
Sbjct: 355 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 414

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             +L  LC+   + EA     ++  SN   D+ + NI IDG  + G +  A  L+  L  
Sbjct: 415 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 474

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K + P + T++ +I G C+ G + +A +L   +  +G   +   Y T    +       R
Sbjct: 475 KGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSR 534

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            + LLQEM  +       T T+ +K L      Q   Q+L +
Sbjct: 535 AIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRE 576



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 222/468 (47%), Gaps = 21/468 (4%)

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
           +K  H  + I GA     ++L     P  V +  L+    ++ +    L L   M S G 
Sbjct: 34  SKSLHF-NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGI 92

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             N+    +L++S C   R+  A  +L ++  +G +PD  T++ LIRG+  + K+ +A+ 
Sbjct: 93  PPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALH 152

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L+++M  +   P+   +G ++ GLC+    + A     S++  NC  +V  YN +ID   
Sbjct: 153 LFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLC 212

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K   + EA  L+ +++ K ISP I T+NSLI+  C   +      LL+ +    + P  V
Sbjct: 213 KDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVV 272

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           ++ T ++A C+EG +     ++ +M  + + P  VTYT ++ G C   ++ EAV++ + M
Sbjct: 273 SFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTM 332

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G  P+ I+YNT+I  +CK + + KA  L  +M    L P + TY+ LI GLC    L
Sbjct: 333 VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 392

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
           ++A  L   +   +     V Y  ++   C    + +AM        K  E S  D    
Sbjct: 393 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALL-----KAIEGSNLD---- 443

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                      PD ++  + +    + G+L +  +L + +   GL PD
Sbjct: 444 -----------PDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 480



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 20/181 (11%)

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A+     M  +   P  + +N ++ S  K K       L +QM    + P   T +ILI+
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
             C    +  A  +L  + +         +TT+I+    EG + +A+  F +M+      
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMI------ 158

Query: 587 SIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
                           GF PD      ++    + G+  +   L   M++    P+ F  
Sbjct: 159 --------------GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 204

Query: 647 N 647
           N
Sbjct: 205 N 205


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 162/524 (30%), Positives = 270/524 (51%), Gaps = 10/524 (1%)

Query: 10   GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR-----NVY 64
            GM+ +A  V  KM    L +S+ + N  L  L   D        I   E P      NV 
Sbjct: 612  GMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSK-DCNKTATAIIVFREFPEVGVCWNVA 670

Query: 65   TNSIVIDGLCQQSRLQDA--ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            + +IVI  +CQ  R+ +A  +L L E  G  + P V+S + +++ YC+ G  +    L  
Sbjct: 671  SYNIVIHFVCQLGRINEAHHLLLLMELKG--YTPDVISYSTVINGYCRFGELDKVWKLIE 728

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             M + GL P++++Y  +I  LC    + EA E  ++M   G+ PD I Y+ L  GF    
Sbjct: 729  KMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRG 788

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
             I  A K   ++  +   PD++TYT +I G+CQIG++ E  KL   ML +G + ++I ++
Sbjct: 789  DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFT 848

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             L++  CK+G I +A  +   M   G  P++VTY+ LI GLCK+  +  A +L +EM   
Sbjct: 849  ELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 908

Query: 303  RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             + PN F + +I+ GLC+   I EA         +    D V Y  ++D Y K G + +A
Sbjct: 909  GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 968

Query: 363  VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             ++  +++ K + P+IVTFN L+ GFC +G + D  +LL+ +   G+ P+A T+   +  
Sbjct: 969  QEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQ 1028

Query: 423  YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            YC   N++   A+ ++M ++ + P   TY  ++KG C    ++EA  L ++M   G +  
Sbjct: 1029 YCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVS 1088

Query: 483  QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
              TY+ +I+ F K K   +A ++ +QM    L      ++   D
Sbjct: 1089 VSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSD 1132



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 253/512 (49%), Gaps = 3/512 (0%)

Query: 97   SVVSLNAIMSRYCK-LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
            SV S N  ++R  K       A  +F    + G+  +  SYNI+IH +C  G + EA   
Sbjct: 632  SVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHL 691

Query: 156  TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
               M   G  PD I+YS +  G+    ++   WK+I+K+  KG  P+  TY  +I   C+
Sbjct: 692  LLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCR 751

Query: 216  IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            I  + E  +    M+ QG   + I Y+ L+   CK G I  A    YEM +  + PD++T
Sbjct: 752  ICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLT 811

Query: 276  YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
            Y+ +I G C+   + +A +L++EM  + + P+      ++ G C+   I +A    + +I
Sbjct: 812  YTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMI 871

Query: 336  MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
             + C  +VV Y  +IDG  K G++  A +L  ++ +  + P+I T+NS++ G CK+G + 
Sbjct: 872  QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 931

Query: 396  DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            +A +L+   +  GL    VTYTT M+AYC+ G + +   +L EM  K + PT VT+ V++
Sbjct: 932  EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLM 991

Query: 456  KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             G C    L++  +LL  M   G+ P+  T+N +++ +C   +L+ A  +   M    +E
Sbjct: 992  NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVE 1051

Query: 516  PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
            P   TY  L+ G C   ++K A  L   ++    S++   Y+ +IK         +A   
Sbjct: 1052 PDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREI 1111

Query: 576  FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
            F QM   G       +   FF      G  PD
Sbjct: 1112 FDQMRRDGLAADKEIF--DFFSDTKYKGKRPD 1141



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 146/546 (26%), Positives = 265/546 (48%), Gaps = 16/546 (2%)

Query: 92   KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI-AGSME 150
            K++G      +       + G    A+ +F  ML YGL     S N+ +  L        
Sbjct: 592  KDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTA 651

Query: 151  EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
             A+    +    GV  +  +Y+I+      L +I+ A  ++  + +KG  PD+++Y+ +I
Sbjct: 652  TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVI 711

Query: 211  CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
             GYC+ G +++  KL E M  +G K N   Y  ++  +C+  ++ EA     EM   G+ 
Sbjct: 712  NGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGIL 771

Query: 271  PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
            PD + Y+ L+ G CK+  +  A + + EM S+ I+P+   + AI+ G C+   + EA   
Sbjct: 772  PDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 831

Query: 331  FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            F  ++      D++ +  +++GY K G+I +A +++  +I+   SP++VT+ +LI G CK
Sbjct: 832  FHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 891

Query: 391  NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
             G +  A  LL  +   GL+P+  TY + +N  C+ GNI+  + L+ E E   +    VT
Sbjct: 892  EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 951

Query: 451  YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
            YT ++   CK  ++ +A ++L +M   G+ P  +T+N ++  FC    L    +LLN M 
Sbjct: 952  YTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1011

Query: 511  LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
               + P + T+N L+   C+  +LK A  +   +    +      Y  ++K HC   ++ 
Sbjct: 1012 AKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMK 1071

Query: 571  KAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVML 615
            +A   F +M  KGF +S+  Y+               +  F  M  +G   D+EI +   
Sbjct: 1072 EAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFS 1131

Query: 616  IAFHQG 621
               ++G
Sbjct: 1132 DTKYKG 1137



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 209/422 (49%), Gaps = 7/422 (1%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
            Y R G +     +I KMK+  LK +  TY S++  L    +  +      + I     P 
Sbjct: 714  YCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPD 773

Query: 62   N-VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
              VYT   ++DG C++  ++ A  F  E   ++  P V++  AI+S +C++G    A  L
Sbjct: 774  TIVYTT--LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 831

Query: 121  FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
            F  ML  GL PD  ++  L++G C AG +++A    N M + G  P+ +TY+ L  G   
Sbjct: 832  FHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 891

Query: 181  LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
               +  A +++ ++   G  P+I TY  ++ G C+ GN+EE +KL     + G   + + 
Sbjct: 892  EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 951

Query: 241  YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
            Y+ L+ + CKSG +D+A  +L EM   GL+P +VT+++L+ G C    +    +L N M 
Sbjct: 952  YTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1011

Query: 301  SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            +K I+PN+     ++   C +  +  A   +  +       D   Y  ++ G+    N+ 
Sbjct: 1012 AKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMK 1071

Query: 361  EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            EA  L++++  K  S S+ T++ LI GF K  K  +AR + D ++  GL      +  F 
Sbjct: 1072 EAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFS 1131

Query: 421  NA 422
            + 
Sbjct: 1132 DT 1133



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 209/468 (44%), Gaps = 57/468 (12%)

Query: 198  GSDPDI--VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS-GRI 254
            GSDP +  V + VL+    + G + E  K+ E ML+ G  L+V + +V L+ + K   + 
Sbjct: 595  GSDPRVFDVFFQVLV----EFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKT 650

Query: 255  DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
              A+ +  E   VG+  ++ +Y+I+I  +C+  ++++A  L   M  K  +P        
Sbjct: 651  ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTP-------- 702

Query: 315  LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
                                       DV+ Y+ +I+GY + G + +  +L  ++ +K +
Sbjct: 703  ---------------------------DVISYSTVINGYCRFGELDKVWKLIEKMKQKGL 735

Query: 375  SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
             P+  T+ S+I   C+  K+A+A      +   G+ P  + YTT ++ +C+ G+I+    
Sbjct: 736  KPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASK 795

Query: 435  LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
               EM ++ I P  +TYT +I G C+   + EA +L  +M   G+ PD IT+  ++  +C
Sbjct: 796  FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYC 855

Query: 495  KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
            K   ++ AF++ N M      P   TY  LIDGLC  GDL +A+ LL  + +  +     
Sbjct: 856  KAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 915

Query: 555  AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMM 599
             Y +I+   C  G++ +A+    +    G       YT               +     M
Sbjct: 916  TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEM 975

Query: 600  LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            L  G  P      V++  F   G L    +L   M+  G+ P+    N
Sbjct: 976  LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 1023



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 3/251 (1%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
            + G +  A  ++ +M ++ L+ +I TYNS++  L  +  + +   L  + + +    +  
Sbjct: 891  KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 950

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T + ++D  C+   +  A   L E  GK   P++V+ N +M+ +C  G  E  + L   M
Sbjct: 951  TYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1010

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            L  G+ P+A ++N L+   CI  +++ A     DM   GVEPD  TY  L KG      +
Sbjct: 1011 LAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNM 1070

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
              AW + Q++  KG    + TY+VLI G+ +     E  ++ + M   G   +   +   
Sbjct: 1071 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFF 1130

Query: 245  LSSMCKSGRID 255
              +  K  R D
Sbjct: 1131 SDTKYKGKRPD 1141


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 252/512 (49%), Gaps = 14/512 (2%)

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY-------GLHPD 132
            DAI   QE       PS+V  +   S     G A   +  F L+L +       G+  +
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFS-----GVASTKQ--FNLVLDFCKKMELNGIAHN 99

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
            ++ NI+I+  C       A      + + G EPD  T++ L  G  L S++S A  ++ 
Sbjct: 100 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVA 159

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           +++  G  P++VTY  ++ G C+ G+    L L   M  +  K +V  YS ++ S+C+ G
Sbjct: 160 RMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDG 219

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            ID A+ L  EME  G+K  LVTY+ L+ GLCK  K +  +QL  +M S++I PN     
Sbjct: 220 CIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFN 279

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++    ++  + EA   +  +I      + + YN ++DGY     + EA  +   ++  
Sbjct: 280 VLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRN 339

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
             SP IVTF SLI G+CK  +V +  +L   I   GL  + VTY+  +  +C+ G ++  
Sbjct: 340 NCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIA 399

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             L QEM +  + P  +TY +++ GLC   KL++A+++ ED+    +  D + Y  II  
Sbjct: 400 EELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEG 459

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            CK   +  A+ L   +    ++P   TY ++I GLC  G L  A+ LL  ++E      
Sbjct: 460 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPN 519

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
              Y T+I+AH  +GD+  +     +M   GF
Sbjct: 520 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 551



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 265/490 (54%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D   DL+ ++  S    ++   S    G+    +    + F ++        ++ +LN +
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           ++ +C+      A  +   ++K G  PD  ++N LI+GLC+   + EA+     M  +G 
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
           +P+ +TY+ +  G       S A  +++K+  +    D+ TY+ +I   C+ G ++  + 
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L + M ++G K +++ Y+ L+  +CK+G+ ++ + LL +M +  + P+++T+++LI    
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K+ K+ +A +LY EM +K ISPN+  + +++ G C +  ++EA    D ++ +NC  D+V
Sbjct: 287 KEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIV 346

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            +  +I GY K+  + E ++L+R++ ++ +  + VT++ L+ GFC++GK+  A  L   +
Sbjct: 347 TFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEM 406

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G+ P  +TY   ++  C+ G +++ L + ++++   +    V YT++I+G+CK  K+
Sbjct: 407 VSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKV 466

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           ++A  L   +   GV P+ +TY  +I   CK   L +A  LL +M     EP   TYN L
Sbjct: 467 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTL 526

Query: 525 IDGLCVNGDL 534
           I     +GDL
Sbjct: 527 IRAHLRDGDL 536



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 245/538 (45%), Gaps = 50/538 (9%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  M++    P    ++    G+         L+F   M  +G+  +  T +I+   F 
Sbjct: 52  LFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFC 111

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +   A+ V+ K++  G +PD  T+  LI G C    V E + L   M+  G + NV+
Sbjct: 112 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVV 171

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ +++ +CKSG    AL LL +M+   +K D+ TYS +I  LC+   +  AI L+ EM
Sbjct: 172 TYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 231

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            +K I  +                                   +V YN ++ G  K G  
Sbjct: 232 ETKGIKSS-----------------------------------LVTYNSLVGGLCKAGKW 256

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            + VQL + +  ++I P+++TFN LI  F K GK+ +A  L   +   G+ P+ +TY + 
Sbjct: 257 NDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSL 316

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           M+ YC +  +     +L  M      P  VT+T +IKG CK  ++ E ++L   +   G+
Sbjct: 317 MDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGL 376

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             + +TY+ +++ FC+   L  A +L  +M    + P   TY IL+DGLC NG L+ A  
Sbjct: 377 VANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALE 436

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC 597
           +   LQ+  ++L  V YT II+  C  G V  A   FC +  KG + ++  YT   S  C
Sbjct: 437 IFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 496

Query: 598 -------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                         M  +G  P+      ++ A  + GDL +  +L   M   G   D
Sbjct: 497 KKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 554



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 187/393 (47%), Gaps = 30/393 (7%)

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D+A+ L  EM      P LV +S    G+       K   L  + C K++  N  AH   
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVAST----KQFNLVLDFC-KKMELNGIAHNIY 101

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQ-----DVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            L +         +  F   ++   ++     D   +N +I+G      + EAV L  ++
Sbjct: 102 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARM 161

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           +E    P++VT+NS++ G CK+G  + A  LL  +    ++    TY+T +++ C +G I
Sbjct: 162 VENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCI 221

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
              ++L +EMETK I  + VTY  ++ GLCK  K  + VQLL+DM    + P+ IT+N +
Sbjct: 222 DAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVL 281

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I  F K   L++A +L  +M    + P + TYN L+DG C+   L  A+ +L  +  +N 
Sbjct: 282 IDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNC 341

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
           S   V +T++IK +C    V + M  F ++ ++G   +   Y+                 
Sbjct: 342 SPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYS----------------- 384

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              +++  F Q G L    EL   M+  G+LPD
Sbjct: 385 ---ILVQGFCQSGKLEIAEELFQEMVSLGVLPD 414


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 243/457 (53%), Gaps = 3/457 (0%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I G C+  + + A   L+   G    P V++ N ++S YCK G  E+   L  ++ +
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG--EINNAL-SVLDR 197

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + PD  +YN ++  LC +G +++A+E  + M +    PD ITY+IL +     S +  
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A K++ ++  +G  PD+VTY VL+ G C+ G ++E +K    M S G + NVI ++++L 
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           SMC +GR  +A  LL +M   G  P +VT++ILI  LC++  + +AI +  +M      P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           NS ++  +L G C+++ +  A  Y + ++   C  D+V YN M+    K G + +AV++ 
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            QL  K  SP ++T+N++I G  K GK   A +LLD ++   L+P  +TY++ +     E
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +   +    E E   I P  VT+  ++ GLCK  +   A+  L  M   G  P++ +Y
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
             +I         ++A +LLN++    L   S+   +
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 247/472 (52%), Gaps = 3/472 (0%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           + +   L++   FL+        P ++    ++  +C+LG    A  +  ++   G  PD
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
             +YN++I G C AG +  AL     + R  V PD +TY+ + +      ++  A +V+ 
Sbjct: 172 VITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           ++L +   PD++TYT+LI   C+   V   +KL + M  +G   +V+ Y+VL++ +CK G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           R+DEA+  L +M + G +P+++T++I++R +C   +   A +L  +M  K  SP+     
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC K ++  A    + +    C  + + YN ++ G+ K   +  A++   +++ +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P IVT+N+++   CK+GKV DA  +L+ +   G  P  +TY T ++   + G   + 
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           + LL EM  K + P  +TY+ ++ GL ++ K+ EA++   +   +G+ P+ +T+N+I+  
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            CK +   +A   L  M     +P   +Y ILI+GL   G  K A  LL  L
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 238/447 (53%), Gaps = 3/447 (0%)

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
            G +EE  +F  +M  HG  PD I  + L +GF  L +   A K+++ L   G+ PD++T
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y V+I GYC+ G +   L + + M       +V+ Y+ +L S+C SG++ +A+ +L  M 
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
                PD++TY+ILI   C+   V  A++L +EM  +  +P+   +  ++ G+C++  + 
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA  + + +  S C  +V+ +NI++      G   +A +L   ++ K  SPS+VTFN LI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
              C+ G +  A  +L+ +  HG +P++++Y   ++ +C+E  + R +  L+ M ++   
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  VTY  ++  LCK  K+++AV++L  +   G +P  ITYNT+I    K     KA +L
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           L++M   +L+P + TY+ L+ GL   G +  A       +   I    V + +I+   C 
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYT 592
                +A+ F   M+ +G + +   YT
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYT 558



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 236/461 (51%), Gaps = 3/461 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+ +G  PD      LI G C  G   +A +    +   G  PD ITY+++  G+    +
Sbjct: 128 MVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE 187

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I+ A  V+ ++ +    PD+VTY  ++   C  G +++ +++ + ML +    +VI Y++
Sbjct: 188 INNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTI 244

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+ + C+   +  A+ LL EM   G  PD+VTY++L+ G+CK+ ++ +AI+  N+M S  
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN   H  IL  +C      +A      ++       VV +NI+I+   + G +G A+
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +  ++ +    P+ +++N L++GFCK  K+  A   L+ +   G  P  VTY T + A 
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++G ++  + +L ++ +K   P  +TY  VI GL K  K  +A++LL++M    + PD 
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           ITY++++    +   + +A +  ++     + P + T+N ++ GLC +     A   LV 
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +        + +YT +I+    EG   +A+    ++  KG 
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 200/390 (51%), Gaps = 1/390 (0%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           ++S +P +V T + ++  LC   +L+ A+  L     ++  P V++   ++   C+    
Sbjct: 197 RMSVSP-DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
             A  L   M   G  PD  +YN+L++G+C  G ++EA++F NDM   G +P+ IT++I+
Sbjct: 256 GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
            +      +   A K++  +L KG  P +VT+ +LI   C+ G +   + + E M   G 
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           + N ++Y+ LL   CK  ++D A+  L  M + G  PD+VTY+ ++  LCK  KV  A++
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           + N++ SK  SP    +  ++ GL +     +A    D +   +   D + Y+ ++ G  
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           + G + EA++ + +     I P+ VTFNS++ G CK+ +   A   L  +   G +P+  
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           +YT  +     EG  +  L LL E+  K +
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 199/367 (54%), Gaps = 3/367 (0%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLL-YNLRHTDI--MWDLYDDIKVSETPRNVYT 65
           +G +  A+ V+ +M + D    + TY  L+    R + +     L D+++      +V T
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            +++++G+C++ RL +AI FL +       P+V++ N I+   C  G    A+ L   ML
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G  P   ++NILI+ LC  G +  A++    M +HG +P++++Y+ L  GF    ++ 
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A + +++++ +G  PDIVTY  ++   C+ G VE+ +++   + S+G    +I Y+ ++
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             + K+G+  +A+ LL EM A  LKPD +TYS L+ GL ++ KV +AI+ ++E     I 
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN+    +I+LGLC+      A  +   +I   C  +   Y I+I+G    G   EA++L
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576

Query: 366 YRQLIEK 372
             +L  K
Sbjct: 577 LNELCNK 583



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 187/428 (43%), Gaps = 53/428 (12%)

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           ++  F L  +  +  L  M ++G ++E    L  M   G  PD++  + LIRG C+  K 
Sbjct: 94  VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            KA ++                  IL G                   S  + DV+ YN+M
Sbjct: 154 RKAAKILE----------------ILEG-------------------SGAVPDVITYNVM 178

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           I GY K G I  A+ +  ++    +SP +VT+N+++   C +GK+  A  +LD +     
Sbjct: 179 ISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P  +TYT  + A C +  +   + LL EM  +   P  VTY V++ G+CK+ +L EA++
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
            L DM   G  P+ IT+N I+RS C       A +LL  M      P+  T+NILI+ LC
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             G L  A  +L  + +H      ++Y  ++   C E  + +A+ +  +MV +G    I 
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415

Query: 590 DYTKSFFCMMLSNGFPPDQEI--------CEVMLIAFH-------QGGDLGSVFELAAVM 634
            Y      +          EI        C  +LI ++       + G  G   +L   M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475

Query: 635 IKSGLLPD 642
               L PD
Sbjct: 476 RAKDLKPD 483



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 161/342 (47%), Gaps = 38/342 (11%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R   V  A+ ++ +M++      + TYN L+  +      D      +D+  S    NV 
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T++I++  +C   R  DA   L +   K F PSVV+ N +++  C+ G    A  +   M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            ++G  P++ SYN L+HG C    M+ A+E+   M   G  PD +TY+ +        ++
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +++ +L  KG  P ++TY  +I G  + G   + +KL + M ++  K + I YS L
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI----------- 293
           +  + + G++DEA+   +E E +G++P+ VT++ ++ GLCK  +  +AI           
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC 550

Query: 294 ------------------------QLYNEMCSKRISPNSFAH 311
                                   +L NE+C+K +   S A 
Sbjct: 551 KPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAE 592



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 130/284 (45%), Gaps = 18/284 (6%)

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           V  N+ +    + G++ +  + L+ +  HG  P  +  TT +  +C  G  ++   +L+ 
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           +E     P  +TY V+I G CK  ++  A+ +L+ M    V+PD +TYNTI+RS C    
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L++A ++L++M   +  P   TY ILI+  C +  + +A  LL  +++   +   V Y  
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNG 603
           ++   C EG + +A+ F   M   G + ++  +                +     ML  G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           F P      +++    + G LG   ++   M + G  P+    N
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 155/588 (26%), Positives = 275/588 (46%), Gaps = 22/588 (3%)

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           I    +  RL+DA+   +        P+  + NAIM       + + A  ++  ML  G+
Sbjct: 58  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 117

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            PD  ++ I +   C+      AL     +   G    A+ Y  +  G +       A +
Sbjct: 118 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQ 173

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNV-EEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +  ++L     P++  +  ++   C+ G+V E GL L +V + +G  +N+  Y++ +  +
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKV-IQRGMSINLFTYNIWIRGL 232

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C++GR+ EA+ L+  M A  + PD+VTY+ LIRGLCK+    +A+     M ++   P+ 
Sbjct: 233 CEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 291

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F +  I+ G C+  M+ EA       +    + D V Y  +I+G    G++  A++L+ +
Sbjct: 292 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 351

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
              K I P IV +NSL+ G C  G +  A ++++ +   G  P   TY   +N  C+ GN
Sbjct: 352 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN 411

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           I     ++ +   K   P   T+  +I G CK+ KL  A+QL+E M+  G+ PD ITYN+
Sbjct: 412 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 471

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           ++   CK   + +  +   +M L    P   TYNILI+  C +  ++ A  ++V + +  
Sbjct: 472 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 531

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------K 593
           +    V++ T+I   C  GD+  A   F ++ EKG+  +   +                +
Sbjct: 532 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 591

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
             F  MLS G   D     V++    +  ++   +     MIK G +P
Sbjct: 592 KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 639



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 160/620 (25%), Positives = 291/620 (46%), Gaps = 35/620 (5%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPR 61
            Y+R G + DAV    +M       +   YN++   L +  + D    +Y  +  +    
Sbjct: 60  AYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSP 119

Query: 62  NVYTNSIVIDGLCQQSR-------------------------------LQDAILFLQETA 90
           +++T++I +   C  +R                                 DA     +  
Sbjct: 120 DLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQML 179

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
                P++ + N ++   CK G    A  L   +++ G+  + F+YNI I GLC AG + 
Sbjct: 180 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLP 239

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           EA+   + M  + V PD +TY+ L +G    S    A   +++++ +G  PD  TY  +I
Sbjct: 240 EAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 298

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            GYC+I  V+E  +L +  + +GF  + + Y  L++ +C  G ++ AL L  E +A G+K
Sbjct: 299 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 358

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD+V Y+ L++GLC Q  +  A+Q+ NEM  +   P+   +  ++ GLC+   I++A + 
Sbjct: 359 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 418

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            +  IM   + DV  +N +IDGY K   +  A+QL  ++ E  I+P  +T+NS++ G CK
Sbjct: 419 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 478

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            GKV +       + L G  P+ +TY   +  +C    ++    ++ +M  + + P  V+
Sbjct: 479 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS 538

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           +  +I G C+   L+ A  L + +   G +    T+NT+I +F    ++  A ++ ++M 
Sbjct: 539 FNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEML 598

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
                  S TY +LIDG C   ++  A   LV + +     +   +  +I +      V 
Sbjct: 599 SKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVF 658

Query: 571 KAMTFFCQMVEKGFEISIRD 590
           +A+     MV+ G    + D
Sbjct: 659 QAVGIIHIMVKIGVVPEVVD 678



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 201/442 (45%), Gaps = 25/442 (5%)

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y   I  Y + G + + +   E M          AY+ ++ ++  +   D+A  +   M 
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
           A G+ PDL T++I +R  C   + H A++L   +  +     + A+  ++ GL       
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR----GAVAYCTVVCGLYAHGHTH 169

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +AR  FD ++ ++   ++  +N ++    K G++ EA  L  ++I++ +S ++ T+N  I
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 229

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G C+ G++ +A RL+D ++ + + P  VTY T +   C++   Q  +  L+ M  +   
Sbjct: 230 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 288

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P   TY  +I G CK   +QEA +LL+D    G  PDQ+TY ++I   C   D+ +A +L
Sbjct: 289 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 348

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
            N+     ++P    YN L+ GLC+ G + +A  ++  + E         Y  +I   C 
Sbjct: 349 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 408

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
            G++  A       + KG+                     PD      ++  + +   L 
Sbjct: 409 MGNISDATVVMNDAIMKGYL--------------------PDVFTFNTLIDGYCKRLKLD 448

Query: 626 SVFELAAVMIKSGLLPDKFLIN 647
           S  +L   M + G+ PD    N
Sbjct: 449 SALQLVERMWEYGIAPDTITYN 470



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 6/186 (3%)

Query: 409 LEPSAVT--YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
           L P+ +   Y   + AY   G ++  +   + M+  A  P    Y  ++  L       +
Sbjct: 45  LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 104

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A ++   M   GV+PD  T+   +RSFC       A +LL  +        +  Y  ++ 
Sbjct: 105 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVC 160

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           GL  +G   +A  L   +   ++     A+  ++ A C  GDV +A     +++++G  I
Sbjct: 161 GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 220

Query: 587 SIRDYT 592
           ++  Y 
Sbjct: 221 NLFTYN 226



 Score = 40.4 bits (93), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 3/134 (2%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVSE 58
           L + + R G +  A  +  K++E     +  T+N+L+       +  +   ++D++    
Sbjct: 542 LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 601

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              + YT  ++IDG C+ + +  A + L E   K F PS+ +   +++          A 
Sbjct: 602 HRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAV 661

Query: 119 GLFCLMLKYGLHPD 132
           G+  +M+K G+ P+
Sbjct: 662 GIIHIMVKIGVVPE 675


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 155/588 (26%), Positives = 275/588 (46%), Gaps = 22/588 (3%)

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           I    +  RL+DA+   +        P+  + NAIM       + + A  ++  ML  G+
Sbjct: 57  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 116

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            PD  ++ I +   C+      AL     +   G    A+ Y  +  G +       A +
Sbjct: 117 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQ 172

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNV-EEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +  ++L     P++  +  ++   C+ G+V E GL L +V + +G  +N+  Y++ +  +
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKV-IQRGMSINLFTYNIWIRGL 231

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C++GR+ EA+ L+  M A  + PD+VTY+ LIRGLCK+    +A+     M ++   P+ 
Sbjct: 232 CEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 290

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F +  I+ G C+  M+ EA       +    + D V Y  +I+G    G++  A++L+ +
Sbjct: 291 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 350

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
              K I P IV +NSL+ G C  G +  A ++++ +   G  P   TY   +N  C+ GN
Sbjct: 351 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN 410

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           I     ++ +   K   P   T+  +I G CK+ KL  A+QL+E M+  G+ PD ITYN+
Sbjct: 411 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 470

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           ++   CK   + +  +   +M L    P   TYNILI+  C +  ++ A  ++V + +  
Sbjct: 471 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 530

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------K 593
           +    V++ T+I   C  GD+  A   F ++ EKG+  +   +                +
Sbjct: 531 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 590

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
             F  MLS G   D     V++    +  ++   +     MIK G +P
Sbjct: 591 KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 638



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 160/620 (25%), Positives = 291/620 (46%), Gaps = 35/620 (5%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPR 61
            Y+R G + DAV    +M       +   YN++   L +  + D    +Y  +  +    
Sbjct: 59  AYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSP 118

Query: 62  NVYTNSIVIDGLCQQSR-------------------------------LQDAILFLQETA 90
           +++T++I +   C  +R                                 DA     +  
Sbjct: 119 DLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQML 178

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
                P++ + N ++   CK G    A  L   +++ G+  + F+YNI I GLC AG + 
Sbjct: 179 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLP 238

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           EA+   + M  + V PD +TY+ L +G    S    A   +++++ +G  PD  TY  +I
Sbjct: 239 EAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 297

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            GYC+I  V+E  +L +  + +GF  + + Y  L++ +C  G ++ AL L  E +A G+K
Sbjct: 298 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 357

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD+V Y+ L++GLC Q  +  A+Q+ NEM  +   P+   +  ++ GLC+   I++A + 
Sbjct: 358 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 417

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            +  IM   + DV  +N +IDGY K   +  A+QL  ++ E  I+P  +T+NS++ G CK
Sbjct: 418 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 477

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            GKV +       + L G  P+ +TY   +  +C    ++    ++ +M  + + P  V+
Sbjct: 478 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS 537

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           +  +I G C+   L+ A  L + +   G +    T+NT+I +F    ++  A ++ ++M 
Sbjct: 538 FNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEML 597

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
                  S TY +LIDG C   ++  A   LV + +     +   +  +I +      V 
Sbjct: 598 SKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVF 657

Query: 571 KAMTFFCQMVEKGFEISIRD 590
           +A+     MV+ G    + D
Sbjct: 658 QAVGIIHIMVKIGVVPEVVD 677



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 201/442 (45%), Gaps = 25/442 (5%)

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y   I  Y + G + + +   E M          AY+ ++ ++  +   D+A  +   M 
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
           A G+ PDL T++I +R  C   + H A++L   +  +     + A+  ++ GL       
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR----GAVAYCTVVCGLYAHGHTH 168

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +AR  FD ++ ++   ++  +N ++    K G++ EA  L  ++I++ +S ++ T+N  I
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 228

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G C+ G++ +A RL+D ++ + + P  VTY T +   C++   Q  +  L+ M  +   
Sbjct: 229 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 287

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P   TY  +I G CK   +QEA +LL+D    G  PDQ+TY ++I   C   D+ +A +L
Sbjct: 288 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 347

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
            N+     ++P    YN L+ GLC+ G + +A  ++  + E         Y  +I   C 
Sbjct: 348 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 407

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
            G++  A       + KG+                     PD      ++  + +   L 
Sbjct: 408 MGNISDATVVMNDAIMKGYL--------------------PDVFTFNTLIDGYCKRLKLD 447

Query: 626 SVFELAAVMIKSGLLPDKFLIN 647
           S  +L   M + G+ PD    N
Sbjct: 448 SALQLVERMWEYGIAPDTITYN 469



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 6/186 (3%)

Query: 409 LEPSAVT--YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
           L P+ +   Y   + AY   G ++  +   + M+  A  P    Y  ++  L       +
Sbjct: 44  LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 103

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A ++   M   GV+PD  T+   +RSFC       A +LL  +        +  Y  ++ 
Sbjct: 104 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVC 159

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           GL  +G   +A  L   +   ++     A+  ++ A C  GDV +A     +++++G  I
Sbjct: 160 GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 219

Query: 587 SIRDYT 592
           ++  Y 
Sbjct: 220 NLFTYN 225



 Score = 40.4 bits (93), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 3/134 (2%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVSE 58
           L + + R G +  A  +  K++E     +  T+N+L+       +  +   ++D++    
Sbjct: 541 LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 600

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              + YT  ++IDG C+ + +  A + L E   K F PS+ +   +++          A 
Sbjct: 601 HRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAV 660

Query: 119 GLFCLMLKYGLHPD 132
           G+  +M+K G+ P+
Sbjct: 661 GIIHIMVKIGVVPE 674


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 163/537 (30%), Positives = 264/537 (49%), Gaps = 35/537 (6%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
            F  M + G  P+  +YN +I G C     +EA  F   MG  G+EP+ IT++++  G  
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++    +V+ ++  KG  PD VTY  L+ GYC+ GN  + L L   M+  G   NV+
Sbjct: 65  RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L++SMCK+G ++ A+    +M   GL P+  TY+ +I G  +Q  + +A ++ NEM
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
                 P+   + A++ G C    + EA      ++    + DVV Y+ +I G+ +   +
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A Q+  ++I K + P  VT++SLI G C+  ++ +A  +   +    L P   TYTT 
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTL 304

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +NAYC+EG++ + L L  EM  K   P  VTY V+I GL KQ + +EA +LL  ++    
Sbjct: 305 INAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDS 364

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P  +TYNT+I + C                  N+E  SA    L+ G C+ G +  AD 
Sbjct: 365 IPSAVTYNTLIENCC------------------NIEFKSAV--ALVKGFCMKGLMDEADQ 404

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF---EISIRDYTKSFF 596
           +  S+   N    +  Y  II  HC  G+V KA   + +MV   F    +++    K+ F
Sbjct: 405 VFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALF 464

Query: 597 CM------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                         +L +    D E+ +V++    + G++  VF L   M K GL+P
Sbjct: 465 TEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIP 521



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 150/527 (28%), Positives = 268/527 (50%), Gaps = 28/527 (5%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + +IDG C+  R  +A  FL+    K   P++++ N I++  C+ G  +    + 
Sbjct: 17  NVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVL 76

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G  PD  +YN L++G C  G+  +AL    +M R+G+ P+ +TY+ L       
Sbjct: 77  VEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKA 136

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             ++ A +   ++ ++G  P+  TYT +I G+ Q G ++E  ++   M   GF  +++ Y
Sbjct: 137 GNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTY 196

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L++  C  GR++EA+GLL +M   G+ PD+V+YS +I G  +  ++ +A Q+  EM  
Sbjct: 197 NALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIG 256

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K + P++  + +++ GLCE+  +TEA   F  ++      D   Y  +I+ Y K G++ +
Sbjct: 257 KSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNK 316

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ L+ ++I+K   P  VT+N LI G  K  +  +ARRLL  +      PSAVTY T + 
Sbjct: 317 ALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIE 376

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C   NI+   A+                  ++KG C +  + EA Q+ E M      P
Sbjct: 377 NCC---NIEFKSAV-----------------ALVKGFCMKGLMDEADQVFESMINKNHKP 416

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL---CVNGDLKNA- 537
           ++  YN II   C+  ++ KA++L  +M   +  P + T   L+  L    ++G+L    
Sbjct: 417 NEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVI 476

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             +L S +  +  L+KV    +++ +  EG++        +M + G 
Sbjct: 477 GDILRSCKLTDAELSKV----LVEINQKEGNMDMVFNLLTEMAKDGL 519



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 256/509 (50%), Gaps = 18/509 (3%)

Query: 30  SIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           ++ TYN+++     L+ TD  +     + +     N+ T +++I+GLC+  RL++    L
Sbjct: 17  NVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVL 76

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            E + K + P  V+ N +++ YCK G    A  L   M++ GL P+  +Y  LI+ +C A
Sbjct: 77  VEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKA 136

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G++  A+EF + M   G+ P+  TY+ +  GF     +  A++V+ ++   G  P IVTY
Sbjct: 137 GNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTY 196

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             LI G+C +G +EE + L + M+ +G   +V++YS ++S   ++  +D A  +  EM  
Sbjct: 197 NALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIG 256

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
             + PD VTYS LI+GLC+Q ++ +A  ++ EM + ++ P+ F +  ++   C++  + +
Sbjct: 257 KSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNK 316

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI- 385
           A    D +I    + D V YN++I+G  K     EA +L  +L      PS VT+N+LI 
Sbjct: 317 ALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIE 376

Query: 386 --------------YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
                          GFC  G + +A ++ +++     +P+   Y   ++ +C  GN+ +
Sbjct: 377 NCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLK 436

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              L +EM      P  VT   ++K L  +    E  +++ D+       D      ++ 
Sbjct: 437 AYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVE 496

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
              K  ++   F LL +M    L P++ T
Sbjct: 497 INQKEGNMDMVFNLLTEMAKDGLIPSTGT 525



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 190/363 (52%), Gaps = 35/363 (9%)

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
           GL+  + M   G   NV+ Y+ ++   CK  R DEA G L  M   GL+P+L+T++++I 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           GLC+  ++ +  ++  EM  K   P                                   
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVP----------------------------------- 86

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D V YN +++GY K GN  +A+ L+ +++   +SP++VT+ SLI   CK G +  A    
Sbjct: 87  DEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFF 146

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           D + + GL P+  TYTT +N + ++G +     +L EM      P+ VTY  +I G C  
Sbjct: 147 DQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVL 206

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            +++EA+ LL+DM   GV PD ++Y+TII  F + ++L +AFQ+  +M   ++ P + TY
Sbjct: 207 GRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTY 266

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           + LI GLC    L  A  +   +    +   +  YTT+I A+C EGD++KA+    +M++
Sbjct: 267 SSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQ 326

Query: 582 KGF 584
           KGF
Sbjct: 327 KGF 329



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 165/333 (49%), Gaps = 15/333 (4%)

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
           +F  +  + C+ +VV YN MIDGY KL    EA    R +  K + P+++TFN +I G C
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           ++G++ +   +L  +   G  P  VTY T +N YC+EGN  + L L  EM    + P  V
Sbjct: 65  RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TYT +I  +CK   L  A++  + M+V G+ P++ TY TII  F +   L +A+++LN+M
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
                 P+  TYN LI+G CV G ++ A  LL  +    +    V+Y+TII       ++
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244

Query: 570 HKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVM 614
            +A     +M+ K        Y+                  F  ML+   PPD+     +
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTL 304

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           + A+ + GDL     L   MI+ G LPD    N
Sbjct: 305 INAYCKEGDLNKALHLHDEMIQKGFLPDAVTYN 337



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 221/457 (48%), Gaps = 31/457 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G  H A+ + A+M    L  ++ TY SL+ ++    + +   + +D + V     N
Sbjct: 98  YCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPN 157

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +I+G  QQ  L +A   L E     F PS+V+ NA+++ +C LG  E A GL  
Sbjct: 158 ERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQ 217

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+  G+ PD  SY+ +I G      ++ A +   +M    V PDA+TYS L +G     
Sbjct: 218 DMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQR 277

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +++ A  + Q++L     PD  TYT LI  YC+ G++ + L L + M+ +GF  + + Y+
Sbjct: 278 RLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYN 337

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           VL++ + K  R  EA  LL ++      P  VTY+ LI   C        I+  + +   
Sbjct: 338 VLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCN-------IEFKSAV--- 387

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
                     A++ G C K ++ EA   F+S+I  N   +  +YN++I G+ ++GN+ +A
Sbjct: 388 ----------ALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKA 437

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI----KLHGLEPSAVTYTT 418
            +LY++++     P  VT  +L+      G   +   ++  I    KL   E S V    
Sbjct: 438 YKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKV---- 493

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            +    +EGN+  +  LL EM    + P+  T T  I
Sbjct: 494 LVEINQKEGNMDMVFNLLTEMAKDGLIPSTGTPTNAI 530


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 158/540 (29%), Positives = 279/540 (51%), Gaps = 8/540 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +L+ +  R G++ DAV  +A+++EL +  + +T N +L  L   R +++ W L++ +   
Sbjct: 134 LLSLLADR-GLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPAP 192

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NV+T +I+ID LC++  L +A   L         P VV+ N+++  Y K G  E  
Sbjct: 193 ----NVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEV 248

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   M   G  PD  +YN L++  C  G ME A  +  +M R GV  + +T+S     
Sbjct: 249 EKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDA 308

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F     +  A K+  ++ +KG  P+ VTYT L+ G C+ G +++ L L   M+ QG  LN
Sbjct: 309 FCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLN 368

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V+ Y+VL+  +CK G++ EA  +   ME  G++ + + Y+ LI G        +A+ L +
Sbjct: 369 VVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLS 428

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  K +  +   +GA++ GLC  + + EA+   + +       + V+Y  ++D   K  
Sbjct: 429 EMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKAR 488

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
              EA+ L +++++    P+IVT+ +L+ G CK G + +A    + +   GLEP+   YT
Sbjct: 489 KESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYT 548

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++  C+ G + + + LL EM  K +   +V  T ++ G  KQ  LQ+A  L   M   
Sbjct: 549 ALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINS 608

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+  D   Y   +  FC    +++A ++L++M  + + P +  YN LI+     G+++ A
Sbjct: 609 GLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEA 668



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 148/539 (27%), Positives = 254/539 (47%), Gaps = 7/539 (1%)

Query: 49  DLYDDIKVSETPRNVYTNSIV---IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIM 105
           DL     ++  PR     S+V   +  L  +  L DA+L L         P+  + N I+
Sbjct: 111 DLLHRAALALGPRRSALPSVVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHIL 170

Query: 106 SRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE 165
               +   +E+A  LF    +    P+ F++NI+I  LC  G + EA      M   G  
Sbjct: 171 LCLARERSSELAWRLF----EQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCS 226

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           PD +TY+ L  G+    ++    K++ ++   G  PD+VTY  L+  +C+ G +E     
Sbjct: 227 PDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSY 286

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
              M  +G   NV+ +S  + + CK+G + EA+ L  +M   G+KP+ VTY+ L+ G CK
Sbjct: 287 FAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCK 346

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
             ++  A+ L NEM  + +  N   +  ++ GLC++  + EA   F  +  +    + +L
Sbjct: 347 AGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELL 406

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y  +I G+    N   A+ L  ++ +K +   +  + +LI+G C   K+ +A+ LL+ + 
Sbjct: 407 YTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMD 466

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             GL+P+ V YT  M+A  +       +ALLQ+M      P  VTY  ++ GLCK   + 
Sbjct: 467 ECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSID 526

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA+     M  +G+ P+   Y  ++   CK   L KA  LL++M    +   +     L+
Sbjct: 527 EAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLM 586

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           DG    G+L++A  L   +    + L    YT  +   C    + +A     +M+E G 
Sbjct: 587 DGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGI 645



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 227/470 (48%), Gaps = 3/470 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           + G + +A  ++A+MK +     + TYNSL+        + +   L  +++      +V 
Sbjct: 206 KEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVV 265

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +++  C+  R++ A  +  E   +    +VV+ +  +  +CK G    A  LF  M
Sbjct: 266 TYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQM 325

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G+ P+  +Y  L+ G C AG +++AL  TN+M + GV  + +TY++L  G     ++
Sbjct: 326 RMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKV 385

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A  V + +   G   + + YT LI G+    N E  L L   M  +G +L+V  Y  L
Sbjct: 386 AEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGAL 445

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +C   ++DEA  LL +M+  GLKP+ V Y+ ++    K  K  +AI L  +M     
Sbjct: 446 IWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGF 505

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   + A++ GLC+   I EA  +F+ ++      +V  Y  ++DG  K G + +AV 
Sbjct: 506 RPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVL 565

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L  ++I+K +S   V   SL+ G  K G + DA  L   +   GL+     YT F+  +C
Sbjct: 566 LLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFC 625

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
               IQ    +L EM    I P  V Y  +I    K   ++EA  L  +M
Sbjct: 626 NLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 135/269 (50%), Gaps = 10/269 (3%)

Query: 4   FVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDI-KVSET 59
           FVY  +     A+ ++++MK+  +++ +  Y +L++   NL+  D    L + + +    
Sbjct: 415 FVYKNS---ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLK 471

Query: 60  PRNV-YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           P NV YTN  ++D   +  +  +AI  LQ+     F P++V+  A++   CK G  + A 
Sbjct: 472 PNNVIYTN--IMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAI 529

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             F  M+  GL P+  +Y  L+ GLC  G +++A+   ++M   G+  D +  + L  G 
Sbjct: 530 SHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGH 589

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +  A+ +  K++  G   D+  YT  + G+C +  ++E  ++   M+  G   + 
Sbjct: 590 LKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDA 649

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           + Y+ L++   K G ++EA  L  EME++
Sbjct: 650 VVYNCLINKCQKLGNMEEAAILQNEMESL 678


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 245/487 (50%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           S +S N   S+       + A   F  ML     P    +N L+  +            +
Sbjct: 31  SSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLS 90

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           N M   G+ PD  T +IL   F  L++   A+ V+ K+L  G  PD  T+T LI G C  
Sbjct: 91  NQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVE 150

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G + + L L + M+ +GF+ NV+ Y  L++ +CK G  + A+ LL  ME    +PD+V Y
Sbjct: 151 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 210

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + +I  LCK  +V +A  L+++M  + ISP+ F + +++  LC            + +I 
Sbjct: 211 TSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMIN 270

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           S  + DVV+++ ++D   K G I EA  +   +I + + P++VT+N+L+ G C   ++ +
Sbjct: 271 SKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDE 330

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A ++ DT+  +G  P+ ++Y T +N YC+   + +   L +EM  K + P  VTY  ++ 
Sbjct: 331 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH 390

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLC   +LQ+A+ L  +M   G  PD  TY  ++   CK   L +A  LL  +   N++P
Sbjct: 391 GLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP 450

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
               Y I+IDG+C  G+L+ A  +  +L    +      YT +I   C  G + +A   F
Sbjct: 451 DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLF 510

Query: 577 CQMVEKG 583
            +M   G
Sbjct: 511 MEMDGNG 517



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 250/514 (48%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L DA+            PS V  N +++   K         L   M  +G+ PD ++ NI
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI+  C       A      + + G++PD  T++ L +G  +  +I  A  +  K++ +G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P++VTY  LI G C++GN    ++L   M     + +V+ Y+ ++ S+CK  ++ EA 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L  +M   G+ PD+ TY+ LI  LC   +      L N+M + +I P+      ++  L
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++  ITEA    D +I+     +VV YN ++DG+     + EAV+++  ++    +P++
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 347

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           +++N+LI G+CK  ++  A  L + +    L P+ VTY T M+  C  G +Q  +AL  E
Sbjct: 348 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHE 407

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M      P   TY +++  LCK+  L EA+ LL+ +    + PD   Y  +I   C+  +
Sbjct: 408 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 467

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L  A  + + +    L P   TY I+I+GLC  G L  A+ L + +  +  S     Y T
Sbjct: 468 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 527

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           I +      +  +A+    +M+ +GF   +   T
Sbjct: 528 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTT 561



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 240/476 (50%), Gaps = 2/476 (0%)

Query: 93  EFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
            FG  P V +LN +++ +C L     A  +   +LK GL PD  ++  LI GLC+ G + 
Sbjct: 95  SFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIG 154

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           +AL   + M   G +P+ +TY  L  G   +   + A ++++ +      PD+V YT +I
Sbjct: 155 DALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSII 214

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
              C+   V E   L   M+ QG   ++  Y+ L+ S+C          LL +M    + 
Sbjct: 215 DSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIM 274

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD+V +S ++  LCK+ K+ +A  + + M  + + PN   + A++ G C +  + EA   
Sbjct: 275 PDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKV 334

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           FD+++ +    +V+ YN +I+GY K+  + +A  L+ ++ +K + P+ VT+N+L++G C 
Sbjct: 335 FDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCH 394

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G++ DA  L   +  HG  P   TY   ++  C++ ++   +ALL+ +E   + P    
Sbjct: 395 VGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQI 454

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           YT+VI G+C+  +L+ A  +  ++   G+ P+  TY  +I   C+   L +A +L  +M 
Sbjct: 455 YTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 514

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +   P   TYN +  GL  N +   A  LL  +     S      T +++  C +
Sbjct: 515 GNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD 570



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 215/444 (48%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I GLC + ++ DA+    +  G+ F P+VV+   +++  CK+G    A  L   M
Sbjct: 139 TFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM 198

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            +    PD   Y  +I  LC    + EA    + M   G+ PD  TY+ L      L + 
Sbjct: 199 EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEW 258

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
                ++ +++     PD+V ++ ++   C+ G + E   + ++M+ +G + NV+ Y+ L
Sbjct: 259 KHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNAL 318

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   C    +DEA+ +   M   G  P++++Y+ LI G CK  ++ KA  L+ EMC K +
Sbjct: 319 MDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKEL 378

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN+  +  ++ GLC    + +A   F  ++    I D+  Y I++D   K  ++ EA+ 
Sbjct: 379 IPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMA 438

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L + +    + P I  +  +I G C+ G++  AR +   +   GL P+  TYT  +N  C
Sbjct: 439 LLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLC 498

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             G +     L  EM+     P   TY  + +GL +  +   A+QLL++M   G + D  
Sbjct: 499 RRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVS 558

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQ 508
           T   ++   C  K  +   Q+L++
Sbjct: 559 TTTLLVEMLCDDKLDQSVKQILSE 582



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 225/462 (48%), Gaps = 3/462 (0%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVID 71
           A  V+AK+ +L L+    T+ +L+  L     + D   L+D +       NV T   +I+
Sbjct: 121 AFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLIN 180

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           GLC+      AI  L+        P VV   +I+   CK      A  LF  M+  G+ P
Sbjct: 181 GLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP 240

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D F+Y  LIH LC     +      N M    + PD + +S +        +I+ A  V+
Sbjct: 241 DIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVV 300

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             ++I+G +P++VTY  L+ G+C    ++E +K+ + M+  G+  NVI+Y+ L++  CK 
Sbjct: 301 DMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKI 360

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            R+D+A  L  EM    L P+ VTY+ L+ GLC   ++  AI L++EM +    P+   +
Sbjct: 361 QRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATY 420

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             +L  LC+K  + EA     ++  SN   D+ +Y I+IDG  + G +  A  ++  L  
Sbjct: 421 RILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS 480

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K + P++ T+  +I G C+ G + +A +L   +  +G  P   TY T      +     R
Sbjct: 481 KGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALR 540

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            + LLQEM  +       T T++++ LC     Q   Q+L +
Sbjct: 541 AIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 582


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 242/457 (52%), Gaps = 3/457 (0%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I G C+  + + A   L+   G    P V++ N ++S YCK G  E+   L  ++ +
Sbjct: 141 TTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAG--EINNAL-SVLDR 197

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + PD  +YN ++  LC +G +++A+E  + M +    PD ITY+IL +     S +  
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQ 257

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A K++ ++  +G  PD+VTY VL+ G C+ G ++E +K    M S G + NVI ++++L 
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           SMC +GR  +A  LL +M   G  P +VT++ILI  LC++  + +AI +  +M      P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQP 377

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           NS ++  +L G C+++ +  A  Y + ++   C  D+V YN M+    K G + +AV++ 
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            QL  K  SP ++T+N++I G  K GK   A +LLD ++   L+P  +TY++ +     E
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +   +    E E   + P  VT+  ++ GLCK  +   A+  L  M   G  P + +Y
Sbjct: 498 GKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSY 557

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
             +I         ++A +LLN++    L   S+   +
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKGLMKRSSAEQV 594



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 249/472 (52%), Gaps = 3/472 (0%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           L +   L++   FL+        P ++    ++  +C++G    A  +  ++   G  PD
Sbjct: 112 LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPD 171

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
             +YN++I G C AG +  AL     + R  V PD +TY+ + +      ++  A +V+ 
Sbjct: 172 VITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           ++L +   PD++TYT+LI   C+   V + +KL + M  +G   +V+ Y+VL++ +CK G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           R+DEA+  L +M + G +P+++T++I++R +C   +   A +L  +M  K  SP+     
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC K ++  A    + +    C  + + YN ++ G+ K   +  A++   +++ +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P IVT+N+++   CK+GKV DA  +L+ +   G  P  +TY T ++   + G   + 
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           + LL EM  K + P  +TY+ ++ GL ++ K+ EA++   +   +GV P+ +T+N+I+  
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLG 528

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            CK +   +A   L  M     +PT  +Y ILI+GL   G  K A  LL  L
Sbjct: 529 LCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 242/456 (53%), Gaps = 3/456 (0%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N  +  L   G +EE  +F  +M  HG  PD I  + L +GF  + +   A K+++ L  
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
            G+ PD++TY V+I GYC+ G +   L + + M       +V+ Y+ +L S+C SG++ +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+ +L  M      PD++TY+ILI   C+   V +A++L +EM  +  +P+   +  ++ 
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           G+C++  + EA  + + +  S C  +V+ +NI++      G   +A +L   ++ K  SP
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           S+VTFN LI   C+ G +  A  +L+ +  HG +P++++Y   ++ +C+E  + R +  L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           + M ++   P  VTY  ++  LCK  K+++AV++L  +   G +P  ITYNT+I    K 
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
               KA +LL++M   +L+P + TY+ L+ GL   G +  A       +   +    V +
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTF 522

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            +I+   C      +A+ F   M+ +G + +   YT
Sbjct: 523 NSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYT 558



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 237/461 (51%), Gaps = 3/461 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+ +G  PD      LI G C  G   +A +    +   G  PD ITY+++  G+    +
Sbjct: 128 MVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGE 187

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I+ A  V+ ++ +    PD+VTY  ++   C  G +++ +++ + ML +    +VI Y++
Sbjct: 188 INNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTI 244

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+ + C+   + +A+ LL EM   G  PD+VTY++L+ G+CK+ ++ +AI+  N+M S  
Sbjct: 245 LIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN   H  IL  +C      +A      ++       VV +NI+I+   + G +G A+
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +  ++ +    P+ +++N L++GFCK  K+  A   L+ +   G  P  VTY T + A 
Sbjct: 365 DILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++G ++  + +L ++ +K   P  +TY  VI GL K  K  +A++LL++M    + PD 
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           ITY++++    +   + +A +  ++     + P + T+N ++ GLC       A   LV 
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVY 544

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +       T+ +YT +I+    EG   +A+    ++  KG 
Sbjct: 545 MINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 199/390 (51%), Gaps = 1/390 (0%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           ++S +P +V T + ++  LC   +L+ A+  L     ++  P V++   ++   C+    
Sbjct: 197 RMSVSP-DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
             A  L   M   G  PD  +YN+L++G+C  G ++EA++F NDM   G +P+ IT++I+
Sbjct: 256 GQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
            +      +   A K++  +L KG  P +VT+ +LI   C+ G +   + + E M   G 
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGC 375

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           + N ++Y+ LL   CK  ++D A+  L  M + G  PD+VTY+ ++  LCK  KV  A++
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           + N++ SK  SP    +  ++ GL +     +A    D +   +   D + Y+ ++ G  
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           + G + EA++ + +     + P+ VTFNS++ G CK  +   A   L  +   G +P+  
Sbjct: 496 REGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTET 555

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           +YT  +     EG  +  L LL E+  K +
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 186/427 (43%), Gaps = 53/427 (12%)

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           +  F L  +  +  L  + ++G ++E    L  M   G  PD++  + LIRG C+  K  
Sbjct: 95  NSSFVLEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTR 154

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           KA ++                                    + L  S  + DV+ YN+MI
Sbjct: 155 KAAKI-----------------------------------LEVLEGSGAVPDVITYNVMI 179

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            GY K G I  A+ +  ++    +SP +VT+N+++   C +GK+  A  +LD +      
Sbjct: 180 SGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P  +TYT  + A C +  + + + LL EM  +   P  VTY V++ G+CK+ +L EA++ 
Sbjct: 237 PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L DM   G  P+ IT+N I+RS C       A +LL  M      P+  T+NILI+ LC 
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            G L  A  +L  + +H      ++Y  ++   C E  + +A+ +  +MV +G    I  
Sbjct: 357 KGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416

Query: 591 YTKSFFCMMLSNGFPPDQEI--------CEVMLIAFH-------QGGDLGSVFELAAVMI 635
           Y      +          EI        C  +LI ++       + G  G   +L   M 
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476

Query: 636 KSGLLPD 642
              L PD
Sbjct: 477 AKDLKPD 483



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 161/342 (47%), Gaps = 38/342 (11%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R   V  A+ ++ +M++      + TYN L+  +      D      +D+  S    NV 
Sbjct: 251 RDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T++I++  +C   R  DA   L +   K F PSVV+ N +++  C+ G    A  +   M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K+G  P++ SYN L+HG C    M+ A+E+   M   G  PD +TY+ +        ++
Sbjct: 371 PKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +++ +L  KG  P ++TY  +I G  + G   + +KL + M ++  K + I YS L
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI----------- 293
           +  + + G++DEA+   +E E +G++P+ VT++ ++ GLCK  +  +AI           
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGC 550

Query: 294 ------------------------QLYNEMCSKRISPNSFAH 311
                                   +L NE+C+K +   S A 
Sbjct: 551 KPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSSAE 592



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 129/284 (45%), Gaps = 18/284 (6%)

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           V  N+ +    + G++ +  + L+ +  HG  P  +  TT +  +C  G  ++   +L+ 
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           +E     P  +TY V+I G CK  ++  A+ +L+ M    V+PD +TYNTI+RS C    
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L++A ++L++M   +  P   TY ILI+  C +  +  A  LL  +++   +   V Y  
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNG 603
           ++   C EG + +A+ F   M   G + ++  +                +     ML  G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           F P      +++    + G LG   ++   M K G  P+    N
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYN 383


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 168/595 (28%), Positives = 270/595 (45%), Gaps = 31/595 (5%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L+DAI    +       PSV+  N +M    ++   ++   L+  M +  +  D +S+NI
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI   C    +  AL     + + G +PD +T+S L  G  +  ++S A  +  ++    
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM---- 173

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P++VT+T L+ G C+ G V E + L + M+  G + N I Y  ++  MCK G    AL
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 259 GLLYEMEAVG-LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
            LL +ME +  +KP++V YS +I GL K  +   A  LY EM  K I P+ F +  ++ G
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
            C     +EA+     ++      +VV Y+ +I+ YVK     EA +LY +++ + I P+
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPN 353

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            +T+NS+I GFCK  ++  A  +   +   G  P   T+ T ++ YC    I     LL 
Sbjct: 354 TITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM    +     TY  +I G C    L  A+ L + M   GV PD +T NT++   C   
Sbjct: 414 EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 473

Query: 498 DLRKAFQLLNQMW-----------LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
            L+ A ++   M             + +EP   TYNILI GL   G    A+ L   +  
Sbjct: 474 KLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPH 533

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI-------RDYTKS----- 594
             I    + Y+++I   C +  + +A   F  M  K F   +         Y K+     
Sbjct: 534 RGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDD 593

Query: 595 ---FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
               FC M   G   D      ++  F + G++    ++   MI SG+ PD   I
Sbjct: 594 GLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITI 648



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 155/587 (26%), Positives = 277/587 (47%), Gaps = 19/587 (3%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           + DA+ + + M       S+  +N L+     +   D++  LY  ++  + P +VY+ +I
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I   C  S+L  A+    +     F P VV+ + ++   C       A  LF  M +  
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR-- 175

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P+  ++  L++GLC  G + EA+   + M   G++P+ ITY  +  G   +     A 
Sbjct: 176 --PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 189 KVIQKLL-IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            +++K+  +    P++V Y+ +I G  + G   +   L   M  +G   ++  Y+ ++  
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            C SGR  EA  LL EM    + P++VTYS LI    K+ K  +A +LY+EM  + I PN
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPN 353

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           +  + +++ G C++  +  A   F  +    C  DV  +N +IDGY     I +  +L  
Sbjct: 354 TITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++ E  +     T+N+LI+GFC  G +  A  L   +   G+ P  VT  T ++  C+ G
Sbjct: 414 EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 473

Query: 428 NIQRLLALLQEMET-----------KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            ++  L + + M+              + P   TY ++I GL  + K  EA +L ++M  
Sbjct: 474 KLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPH 533

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+ P+ ITY+++I   CK   L +A Q+ + M   +  P   T+N L+ G C  G + +
Sbjct: 534 RGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDD 593

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
              L   +    I    + Y T+I      G+++ A+  F +M+  G
Sbjct: 594 GLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSG 640



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 263/552 (47%), Gaps = 26/552 (4%)

Query: 104 IMSRYCKLGFAEVAKGLFCLM-LKYGLHP---DAFSYNILIHGLCIA--------GSMEE 151
           +++R C+ G +  A  LFC   +++ L     D  S      G  +           +E+
Sbjct: 1   MLARVCRSGSSSSAARLFCTRSIRHALAKKSRDGESGEAGFRGESLKLRSGFHEIKGLED 60

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A++  +DM R    P  I ++ L      + +      + QK+  K    D+ ++ +LI 
Sbjct: 61  AIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIK 120

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
            +C    +   L     +   GF+ +V+ +S LL  +C   R+ EAL L ++M     +P
Sbjct: 121 CFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRP 176

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE-KEMITEARMY 330
           ++VT++ L+ GLC++ +V +A+ L + M    + PN   +G I+ G+C+  + ++   + 
Sbjct: 177 NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLL 236

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
                MS+   +VV+Y+ +IDG  K G   +A  LY ++ EK I P + T+N +I GFC 
Sbjct: 237 RKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCS 296

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           +G+ ++A+RLL  +    + P+ VTY+  +NAY +E        L  EM  + I P  +T
Sbjct: 297 SGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTIT 356

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  +I G CKQ +L  A  +   M   G +PD  T+NT+I  +C  K +    +LL++M 
Sbjct: 357 YNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMT 416

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              L   + TYN LI G C+ GDL  A  L   +    +    V   T++   C  G + 
Sbjct: 417 ETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 476

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
            A+  F  M +   ++   D ++ F      NG  PD +   +++      G      EL
Sbjct: 477 DALEMFKAMQKSKMDL---DASRPF------NGVEPDVQTYNILISGLINEGKFLEAEEL 527

Query: 631 AAVMIKSGLLPD 642
              M   G++P+
Sbjct: 528 YKEMPHRGIVPN 539



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/543 (25%), Positives = 258/543 (47%), Gaps = 13/543 (2%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           A+    K+ +L  +  + T+++LL+ L   D + +  D       P NV T + +++GLC
Sbjct: 131 ALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRP-NVVTFTTLMNGLC 189

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LHPDA 133
           ++ R+ +A+  L         P+ ++   I+   CK+G    A  L   M +   + P+ 
Sbjct: 190 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNV 249

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
             Y+ +I GL   G   +A     +M   G+ PD  TY+ +  GF    + S A +++Q+
Sbjct: 250 VIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQE 309

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +L +  +P++VTY+ LI  Y +     E  +L + ML +G   N I Y+ ++   CK  R
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +D A  + Y M   G  PD+ T++ LI G C   ++    +L +EM    +  ++  +  
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++ G C    +  A      +I S    D+V  N ++DG    G + +A+++++ + + +
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489

Query: 374 -----------ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
                      + P + T+N LI G    GK  +A  L   +   G+ P+ +TY++ +N 
Sbjct: 490 MDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMING 549

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C++  +     +   M +K+  P  VT+  ++ G CK  ++ + ++L  +M   G+  D
Sbjct: 550 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVAD 609

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            ITY T+I  F K  ++  A  +  +M    + P + T   ++  L    +LK A  +L 
Sbjct: 610 AITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLE 669

Query: 543 SLQ 545
            LQ
Sbjct: 670 DLQ 672



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 235/488 (48%), Gaps = 27/488 (5%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDI----------KVS 57
           R G V +AV ++ +M E  L+ +  TY +++      D M  + D +          ++S
Sbjct: 190 REGRVVEAVALLDRMVEDGLQPNQITYGTIV------DGMCKIGDTVSALNLLRKMEEMS 243

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NV   S +IDGL +  R  DA     E   K   P + + N ++  +C  G    A
Sbjct: 244 HIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEA 303

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   ML+  ++P+  +Y+ LI+         EA E  ++M   G+ P+ ITY+ +  G
Sbjct: 304 QRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDG 363

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F   +++  A  +   +  KG  PD+ T+  LI GYC    +++G +L   M   G   +
Sbjct: 364 FCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVAD 423

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              Y+ L+   C  G ++ AL L  +M + G+ PD+VT + L+ GLC   K+  A++++ 
Sbjct: 424 TTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 483

Query: 298 EMCSKR-----------ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            M   +           + P+   +  ++ GL  +    EA   +  +     + + + Y
Sbjct: 484 AMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITY 543

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           + MI+G  K   + EA Q++  +  K  SP +VTFN+L+ G+CK G+V D   L   +  
Sbjct: 544 SSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGR 603

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+   A+TY T ++ + + GNI   L + QEM +  + P  +T   ++  L  + +L+ 
Sbjct: 604 RGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKR 663

Query: 467 AVQLLEDM 474
           AV +LED+
Sbjct: 664 AVAMLEDL 671



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 236/449 (52%), Gaps = 17/449 (3%)

Query: 8   RTGMVHDAVFVIAKMKELD-LKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRN 62
           + G    A+ ++ KM+E+  +K ++  Y++++  L    RH+D   +LY +++      +
Sbjct: 225 KIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSD-AHNLYTEMQEKGIFPD 283

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           ++T + +IDG C   R  +A   LQE   ++  P+VV+ +A+++ Y K      A+ L+ 
Sbjct: 284 LFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYD 343

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML  G+ P+  +YN +I G C    ++ A      M   G  PD  T++ L  G+    
Sbjct: 344 EMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAK 403

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +I    +++ ++   G   D  TY  LI G+C +G++   L L + M+S G   +++  +
Sbjct: 404 RIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 463

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAV-----------GLKPDLVTYSILIRGLCKQDKVHK 291
            LL  +C +G++ +AL +   M+             G++PD+ TY+ILI GL  + K  +
Sbjct: 464 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLE 523

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A +LY EM  + I PN+  + +++ GLC++  + EA   FDS+   +   DVV +N ++ 
Sbjct: 524 AEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVS 583

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           GY K G + + ++L+ ++  + I    +T+ +LI+GF K G +  A  +   +   G+ P
Sbjct: 584 GYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYP 643

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEME 440
             +T  + +     +  ++R +A+L++++
Sbjct: 644 DTITIRSMLTVLWSKEELKRAVAMLEDLQ 672



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 175/385 (45%), Gaps = 57/385 (14%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           +  +G   +A  ++ +M E  +  ++ TY++L+      R      +LYD++     PR 
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEM----LPRG 349

Query: 63  VYTNSI----VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           +  N+I    +IDG C+Q+RL  A       A K   P V + N ++  YC     +   
Sbjct: 350 IIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGT 409

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM------------------- 159
            L   M + GL  D  +YN LIHG C+ G +  AL+ +  M                   
Sbjct: 410 ELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 469

Query: 160 ---GR------------------------HGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
              G+                        +GVEPD  TY+IL  G     +   A ++ +
Sbjct: 470 CDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYK 529

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           ++  +G  P+ +TY+ +I G C+   ++E  ++ + M S+ F  +V+ ++ L+S  CK+G
Sbjct: 530 EMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAG 589

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           R+D+ L L  EM   G+  D +TY  LI G  K   ++ A+ ++ EM S  + P++    
Sbjct: 590 RVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIR 649

Query: 313 AILLGLCEKEMITEARMYFDSLIMS 337
           ++L  L  KE +  A    + L MS
Sbjct: 650 SMLTVLWSKEELKRAVAMLEDLQMS 674


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 156/584 (26%), Positives = 283/584 (48%), Gaps = 24/584 (4%)

Query: 22  MKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQD 81
           +++ + +  +  ++SLL+ L     + +    +K      NV   + +++GLCQ  R+ +
Sbjct: 269 LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDE 328

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEVAKGLFCLMLKYGLHPDAFSYNILI 140
           A               V++ N ++   CKL    E  + +  +    G  P+  +++ LI
Sbjct: 329 AFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLI 388

Query: 141 HGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSILAKGF------HLLSQI--------- 184
            GLC AG + +A E    M    G+ P+  TY+ L +G         L Q          
Sbjct: 389 QGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREW 448

Query: 185 --SGAWKV----IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             S +W +    +  L+++   P +VTY  L+ G  + G V + L L E M+  G   +V
Sbjct: 449 RSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDV 508

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           I ++ +L  +CK  RI +A  +       G +P++VTYS LI GL K  K+ +A+QL  +
Sbjct: 509 ITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAK 568

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M       N+  +  ++ GL +   + +A +    +  + C+ D V YN +IDG+ K   
Sbjct: 569 MVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQR 628

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EAV L R+++E    PS+VT+ +L +G C++G+  +A  +LD +   G  P+A+TY++
Sbjct: 629 LREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSS 688

Query: 419 FMNAYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
            ++  C+ G +   L   ++M   + + P  + Y+ +I GLCK  ++ EA + LE M   
Sbjct: 689 IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRA 748

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G  PD +T++ +I   C    +    +L   M     +     YN +I+  C+ G+   A
Sbjct: 749 GRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAA 808

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
             LL  ++ H I+   V +  +IKA C    + +A+++F  + E
Sbjct: 809 YALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPE 852



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 168/604 (27%), Positives = 290/604 (48%), Gaps = 33/604 (5%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNV 63
           S+ G +  A      M +  +  +  TY++L+  L      DI   L  D     +   +
Sbjct: 222 SKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGM 278

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +  S ++ GLCQ  RL++AI  L+        P+VV  N++M+  C+    + A  LF +
Sbjct: 279 FAFSSLLHGLCQAHRLEEAIQLLKAMPCV---PNVVCFNSLMNGLCQARRVDEAFELFDV 335

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR-HGVEPDAITYSILAKGFHLLS 182
           M + G   D  +YNIL+ GLC    + EA      M R  G  P+ +T+S L +G     
Sbjct: 336 MKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAG 395

Query: 183 QISGAWKVIQKLL-IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN---- 237
           +++ AW+V ++++ ++G  P+  TY  L+ G C+ G+     +  E ML + ++ +    
Sbjct: 396 RVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWP 455

Query: 238 -----------------VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
                            ++ Y+ L++ + KSG + +ALGLL  M   GL PD++T++ ++
Sbjct: 456 IHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVL 515

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
            GLCK+ ++  A  ++     +   PN   +  ++ GL +   + EA      ++   C 
Sbjct: 516 DGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR 575

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            + V Y+ ++DG +K+G + +AV + RQ+ +    P  VT+N+LI GF K  ++ +A  L
Sbjct: 576 ANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGL 635

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L  +   G  PS VTYTT  +  C  G     + +L  M  +   P  +TY+ ++ GLCK
Sbjct: 636 LREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCK 695

Query: 461 QWKLQEAVQLLEDMYVIGV-TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
             ++ EA+   E M    V  P  I Y+ +I   CK   + +A++ L +M      P   
Sbjct: 696 AGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVV 755

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           T++ILI+GLC  G +     L   + E        AY  +I A+C +G+   A     +M
Sbjct: 756 TFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEM 815

Query: 580 VEKG 583
              G
Sbjct: 816 KTHG 819



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 176/638 (27%), Positives = 296/638 (46%), Gaps = 56/638 (8%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           G V +A F   ++  +       TYN++   LY     +    +   +  S +   V+T 
Sbjct: 155 GRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTF 214

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF----- 121
           +I +DGL +   L  A  F          P+ V+ +A++   CK G  ++A GL      
Sbjct: 215 TIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNS 274

Query: 122 -CLMLKYG--LH---------------------PDAFSYNILIHGLCIAGSMEEALEFTN 157
              M  +   LH                     P+   +N L++GLC A  ++EA E  +
Sbjct: 275 QAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFD 334

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL-IKGSDPDIVTYTVLICGYCQI 216
            M   G   D ITY+IL KG   L +I  A++ ++ +   +G  P++VT++ LI G C  
Sbjct: 335 VMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNA 394

Query: 217 GNVEEGLKLREVMLS-QGFKLNVIAYSVLLSSMCKSG---RIDEALGLLYEMEAVG---- 268
           G V +  ++ E M++ +G   N   Y+ LL  +CK+G   R+++    + E E       
Sbjct: 395 GRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSW 454

Query: 269 --------------LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
                          +P LVTY+ L+ GL K   V  A+ L   M    +SP+     ++
Sbjct: 455 PIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSV 514

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           L GLC+++ I +A   F   +   C  +VV Y+ +IDG  K+  + EA+QL  +++E   
Sbjct: 515 LDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGC 574

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
             + VT+++++ G  K G++ DA  +L  ++  G  P AVTY T ++ + +   ++  + 
Sbjct: 575 RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVG 634

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           LL+EM      P+ VTYT +  GLC+  +  EAV++L+ M   G  P+ ITY++I+   C
Sbjct: 635 LLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLC 694

Query: 495 KCKDLRKAFQLLNQMWLHNL-EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           K   + +A     +M    +  P    Y+ LIDGLC  G +  A   L  +         
Sbjct: 695 KAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDV 754

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           V ++ +I   C  G +   +  FC M E+G +  I  Y
Sbjct: 755 VTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAY 792



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 157/580 (27%), Positives = 273/580 (47%), Gaps = 25/580 (4%)

Query: 29  VSIQTYNSLLYNLRHTDIMWDLYDD-IKVSETPRNVYTNSIVIDGLCQ---QSRLQDAIL 84
           V+  T    L N    +  W++Y+  + V     N +T + +++GLC+     RL+    
Sbjct: 382 VTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFE 441

Query: 85  FLQETAGKEFG------------------PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
            + E   +                     P++V+ N +++   K G    A GL   M++
Sbjct: 442 QMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIE 501

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL PD  ++N ++ GLC    + +A          G  P+ +TYS L  G   ++++  
Sbjct: 502 SGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDE 561

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +++ K++  G   + VTY+ ++ G  ++G +E+ + +   M   G   + + Y+ L+ 
Sbjct: 562 ALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLID 621

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
              K  R+ EA+GLL EM   G  P +VTY+ L  GLC+  +  +A+++ + M ++  +P
Sbjct: 622 GFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAP 681

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD-VVLYNIMIDGYVKLGNIGEAVQL 365
           N+  + +I+ GLC+   +TEA  YF+ +     +   V+ Y+ +IDG  K G I EA + 
Sbjct: 682 NAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEF 741

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++I     P +VTF+ LI G C  G++     L   +   G +     Y   +NAYC 
Sbjct: 742 LERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCL 801

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +G      ALL+EM+T  I    VT+ +VIK LC   ++ EAV       +     D+I+
Sbjct: 802 KGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHS--IPEDCRDEIS 859

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YNT+I S    +   +A +LL  M      P +  Y  ++DGL   G  + A  LL  ++
Sbjct: 860 YNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMR 919

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
               S     YT +I        +  A  +F +M+ K  +
Sbjct: 920 SRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLK 959



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 164/599 (27%), Positives = 276/599 (46%), Gaps = 41/599 (6%)

Query: 32   QTYNSLLYNLRHTDIMWDLY----DDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
            Q +  +L     +   W ++    D + V      + T + ++ GL +   ++DA+  L+
Sbjct: 438  QCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLE 497

Query: 88   ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
                    P V++ N+++   CK      A  +F   L+ G  P+  +Y+ LI GL    
Sbjct: 498  FMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMA 557

Query: 148  SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
             M+EAL+    M   G   + +TYS +  G   + ++  A  V++++   G  PD VTY 
Sbjct: 558  KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYN 617

Query: 208  VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
             LI G+ +   + E + L   ML  GF  +V+ Y+ L   +C+SGR DEA+ +L  M A 
Sbjct: 618  TLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR 677

Query: 268  GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI-SPNSFAHGAILLGLCEKEMITE 326
            G  P+ +TYS ++ GLCK  +V +A+  + +M    + +P+  A+ A++ GLC+   I E
Sbjct: 678  GCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDE 737

Query: 327  ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
            A  + + +I +  I DVV ++I+I+G    G I   ++L+  + E+     I  +N++I 
Sbjct: 738  AYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMIN 797

Query: 387  GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI----------------- 429
             +C  G+ + A  LL+ +K HG+  + VT+   + A C    I                 
Sbjct: 798  AYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDE 857

Query: 430  ----------------QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
                            ++ L LL+ M      P    Y  V+ GL K    + A +LL++
Sbjct: 858  ISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQE 917

Query: 474  MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
            M   G +PD  TY  +I    K K L  A     +M   NL+P +  Y+ LID  C    
Sbjct: 918  MRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADK 977

Query: 534  LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            + +A  LL S     I  T   Y+T++ + C      KA+    +M  K  E  I  +T
Sbjct: 978  VDDAWKLLRS---SGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWT 1033



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 164/571 (28%), Positives = 275/571 (48%), Gaps = 9/571 (1%)

Query: 7    SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVS---ETPRNV 63
            S++GMV DA+ ++  M E  L   + T+NS+L  L     + D ++  K +       NV
Sbjct: 484  SKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNV 543

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             T S +IDGL + +++ +A+  L +        + V+ + ++    K+G  E A  +   
Sbjct: 544  VTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 603

Query: 124  MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
            M   G  PDA +YN LI G      + EA+    +M   G  P  +TY+ L  G     +
Sbjct: 604  MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR 663

Query: 184  ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML-SQGFKLNVIAYS 242
               A +++  +  +G  P+ +TY+ ++ G C+ G V E L   E M   +    +VIAYS
Sbjct: 664  FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYS 723

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             L+  +CK+GRIDEA   L  M   G  PD+VT+SILI GLC   ++   ++L+  M  +
Sbjct: 724  ALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAER 783

Query: 303  RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
                + +A+ A++   C K   + A    + +      ++ V + I+I        I EA
Sbjct: 784  GCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEA 843

Query: 363  VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            V  +  + E       +++N+LI     + +   A  LL  +   G  P A  Y T M+ 
Sbjct: 844  VSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDG 901

Query: 423  YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
              + G+ +    LLQEM ++   P   TYT++I GL K  +L  A    E+M    + PD
Sbjct: 902  LFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPD 961

Query: 483  QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             I Y+++I +FCK   +  A++LL       +EPT   Y+ ++D LC N     A  ++ 
Sbjct: 962  AIVYSSLIDAFCKADKVDDAWKLLRS---SGIEPTITMYSTMVDSLCKNRGTDKALEVIR 1018

Query: 543  SLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
             ++  N       +T++  A+ AEG V +A+
Sbjct: 1019 EMKSKNCEPGIHIWTSLATAYVAEGRVDEAV 1049



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 167/609 (27%), Positives = 273/609 (44%), Gaps = 61/609 (10%)

Query: 33  TYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
           TYN L+  L    R  D        I+    P  V T S VIDGLC+ + +      L+E
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRP-TVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
            AG+   P+ V+ N +++     G A+ A  L   M   G  P+  ++ ++I GLC  G 
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +E A    ++M   G  PD   +++L      L ++  AW   Q++L+ G  PD VTY  
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           ++ G  + G +E    + +++        V  +++ +  + K+G +  A      M   G
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK-----------------RIS------ 305
           + P+ VTY  LI GLCK  K+  A+ L  +  S+                 R+       
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLL 301

Query: 306 ------PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
                 PN     +++ GLC+   + EA   FD +  S C  DV+ YNI++ G  KL  I
Sbjct: 302 KAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRI 361

Query: 360 GEA---VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT-IKLHGLEPSAVT 415
            EA   V+L R+   +  SP++VTF++LI G C  G+V  A  + +  + + G+ P+  T
Sbjct: 362 PEAYRHVELMRR--TEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFT 419

Query: 416 YTTFMNAYCEEGNIQRLLALLQEM---------------------ETKAIGPTHVTYTVV 454
           Y   +   C+ G+ +RL    ++M                       +   PT VTY  +
Sbjct: 420 YAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTL 479

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           + GL K   +++A+ LLE M   G++PD IT+N+++   CK + +  A  +  +      
Sbjct: 480 VTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 539

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P   TY+ LIDGL     +  A  LL  + E       V Y+T++      G +  A+ 
Sbjct: 540 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 599

Query: 575 FFCQMVEKG 583
              QM + G
Sbjct: 600 VLRQMRDAG 608



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 172/681 (25%), Positives = 294/681 (43%), Gaps = 71/681 (10%)

Query: 33  TYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN+L+  L         + L + +  +  P  + T  ++I GLC++  ++ A   + E 
Sbjct: 73  TYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEM 132

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             + F P V     ++   C+LG  + A   F  +L  G  PDA +YN ++ GL  AG +
Sbjct: 133 VDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRL 192

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           E A      +      P   T++I   G      ++GA++    +   G  P+ VTY  L
Sbjct: 193 EAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDAL 252

Query: 210 ICGYCQIGNVEEGLKLREVM---------------LSQGFKL--------------NVIA 240
           I G C+ G ++  L L                   L Q  +L              NV+ 
Sbjct: 253 IDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVC 312

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++ L++ +C++ R+DEA  L   M+  G   D++TY+IL++GLCK  ++ +A +    M 
Sbjct: 313 FNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMR 372

Query: 301 -SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGN 358
            ++  SPN      ++ GLC    + +A   ++ ++    I  +   Y  +++G  K G+
Sbjct: 373 RTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGD 432

Query: 359 IGEAVQLYRQLIEKR---------------------ISPSIVTFNSLIYGFCKNGKVADA 397
                Q + Q++E+                        P++VT+N+L+ G  K+G V DA
Sbjct: 433 SRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDA 492

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             LL+ +   GL P  +T+ + ++  C+E  I     + +    +   P  VTY+ +I G
Sbjct: 493 LGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDG 552

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           L K  K+ EA+QLL  M  +G   + +TY+T++    K   +  A  +L QM      P 
Sbjct: 553 LSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 612

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
           + TYN LIDG      L+ A  LL  + E     + V YTT+    C  G   +A+    
Sbjct: 613 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD 672

Query: 578 QMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLI-AFHQG 621
            M  +G   +   Y+                 +F  M  +       I    LI    + 
Sbjct: 673 YMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKA 732

Query: 622 GDLGSVFELAAVMIKSGLLPD 642
           G +   +E    MI++G +PD
Sbjct: 733 GRIDEAYEFLERMIRAGRIPD 753



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/547 (25%), Positives = 260/547 (47%), Gaps = 52/547 (9%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           +V+ N +++  CK G    A   F   +++G  P   +Y+ +I GLC    +++  +   
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           +M   G  P+A+TY+ L        +   A+ +++++   G  P+++T+ ++I G C+ G
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            +E   ++ + M+ +GF  +V  ++VLL ++C+ GR+DEA     ++  +G  PD VTY+
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            ++ GL K  ++  A  +   +     SP  F     + GL +   +T A  +FDS+  +
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYR---------------------QLIEKRIS- 375
               + V Y+ +IDG  K G +  A+ L R                       +E+ I  
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQL 300

Query: 376 -------PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
                  P++V FNSL+ G C+  +V +A  L D +K  G     +TY   +   C+   
Sbjct: 301 LKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRR 360

Query: 429 IQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI-GVTPDQITY 486
           I      ++ M  T+   P  VT++ +I+GLC   ++ +A ++ E M  + G++P++ TY
Sbjct: 361 IPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTY 420

Query: 487 NTIIRSFCKCKDLRKAFQLLNQM----W-------LHNLE----------PTSATYNILI 525
             ++   CK  D R+  Q   QM    W       +H+ E          PT  TYN L+
Sbjct: 421 AFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLV 480

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            GL  +G +++A  LL  + E  +S   + + +++   C E  +  A   F + +E+G  
Sbjct: 481 TGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 540

Query: 586 ISIRDYT 592
            ++  Y+
Sbjct: 541 PNVVTYS 547



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 254/519 (48%), Gaps = 48/519 (9%)

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +TY++L  G     ++  A+   +K +  G  P +VTY+ +I G C+   V++G KL E 
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M  +G   N + Y+ L++++   GR  EA  LL  M A G  P+L+T+ ++I+GLCK+ +
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           +  A ++ +EM  +   P+   H  +L  LCE   + EA  +F  +++     D V YN 
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           M+DG  K G +  A  + + L E   SP++ TF   + G  K G +  A    D++   G
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P+ VTY   ++  C+ G +   L LL++  ++A       ++ ++ GLC+  +L+EA+
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQA---GMFAFSSLLHGLCQAHRLEEAI 298

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           QLL+ M  +   P+ + +N+++   C+ + + +AF+L + M          TYNIL+ GL
Sbjct: 299 QLLKAMPCV---PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGL 355

Query: 529 CVNGDLKNA-DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE-KGFEI 586
           C    +  A   + +  +    S   V ++T+I+  C  G V++A   + +MV  +G  I
Sbjct: 356 CKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEG--I 413

Query: 587 SIRDYTKSF-----------------FCMML------SNGFP---PD-----QEICEVML 615
           S   +T +F                 F  ML      S+ +P   P+      ++C   L
Sbjct: 414 SPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTL 473

Query: 616 IAFH-------QGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           + ++       + G +     L   MI+SGL PD    N
Sbjct: 474 VTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFN 512



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 246/505 (48%), Gaps = 40/505 (7%)

Query: 7    SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNV 63
            S+   + +A+ ++AKM EL  + +  TY++++  L     M D   +   ++ +    + 
Sbjct: 554  SKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDA 613

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             T + +IDG  ++ RL++A+  L+E     F PSVV+   +    C+ G  + A  +   
Sbjct: 614  VTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDY 673

Query: 124  MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV-EPDAITYSILAKGFHLLS 182
            M   G  P+A +Y+ ++ GLC AG + EAL +   M R  V  P  I YS L  G     
Sbjct: 674  MAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAG 733

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +I  A++ +++++  G  PD+VT+++LI G C  G ++ GL+L   M  +G K ++ AY+
Sbjct: 734  RIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYN 793

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN---EM 299
             ++++ C  G    A  LL EM+  G+  + VT+ I+I+ LC  D++ +A+  ++   E 
Sbjct: 794  AMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED 853

Query: 300  CSKRIS------------------------------PNSFAHGAILLGLCEKEMITEARM 329
            C   IS                              P++  +  ++ GL +      A  
Sbjct: 854  CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAK 913

Query: 330  YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
                +       D+  Y IMI G  K   +  A   + +++ K + P  + ++SLI  FC
Sbjct: 914  LLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFC 973

Query: 390  KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
            K  KV DA +LL   +  G+EP+   Y+T +++ C+     + L +++EM++K   P   
Sbjct: 974  KADKVDDAWKLL---RSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIH 1030

Query: 450  TYTVVIKGLCKQWKLQEAVQLLEDM 474
             +T +      + ++ EAV+L+ D+
Sbjct: 1031 IWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 211/471 (44%), Gaps = 42/471 (8%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
            + G + DAV V+ +M++        TYN+L+       R  + +  L + ++    P +V
Sbjct: 590  KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHP-SV 648

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             T + +  GLC+  R  +A+  L   A +   P+ ++ ++I+   CK G    A G F  
Sbjct: 649  VTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK 708

Query: 124  MLKYGL-HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M +  +  P   +Y+ LI GLC AG ++EA EF   M R G  PD +T+SIL  G     
Sbjct: 709  MARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 768

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +I    ++   +  +G   DI  Y  +I  YC  G       L E M + G   N + + 
Sbjct: 769  RIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHG 828

Query: 243  VLLSSMCKSGRIDEA---------------------------------LGLLYEMEAVGL 269
            +++ ++C + RIDEA                                 L LL  M A G 
Sbjct: 829  IVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGG 888

Query: 270  KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
             PD   Y  ++ GL K      A +L  EM S+  SP+   +  ++ GL + + +  A  
Sbjct: 889  SPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACD 948

Query: 330  YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
            YF+ ++  N   D ++Y+ +ID + K   + +A +L R      I P+I  +++++   C
Sbjct: 949  YFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRS---SGIEPTITMYSTMVDSLC 1005

Query: 390  KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
            KN     A  ++  +K    EP    +T+   AY  EG +   + L+ +++
Sbjct: 1006 KNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 159/557 (28%), Positives = 265/557 (47%), Gaps = 52/557 (9%)

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           F P+  S N ++         +VA  +F  ML  G+ P  +++ +++   C+   ++ A 
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
               DM +HG  P++I Y +L       ++++ A K+++++ + G +PD+ T+  +I G 
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE---------- 263
           C+ G + E  KL + ML + F  + +    L+  +C+ G++DEA  +L +          
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYN 340

Query: 264 ----------------------MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
                                 M   G +PD  T++I+I GLCK+  +  A++  +EM  
Sbjct: 341 TLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK 400

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   PN   +  ++ G C++    EA    +S+       + V YN +I    K G I +
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+Q+Y ++  K   P I TFNSLIYG CKN K+ +A  L   + L G+  + VTY T ++
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           A+     IQ+   L+ EM  +     ++TY  +IK LCK    ++ + L+E M+   + P
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFP 580

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
              + N +I SFC+   +  A Q L  M    L P   TYN LI+GLC  G  + A  L 
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLF 640

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
             LQ   I    V Y T+I  +C EG  + A    CQ++ KG                +S
Sbjct: 641 NGLQAKGIHPDAVTYNTLISRYCYEGLFNDA----CQLLFKG----------------VS 680

Query: 602 NGFPPDQEICEVMLIAF 618
           NGF P++    +++  F
Sbjct: 681 NGFIPNEITWSILINYF 697



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 143/450 (31%), Positives = 233/450 (51%), Gaps = 5/450 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T + VI GLC+  R+ +A         ++F    +    +M   C++G  + A+   
Sbjct: 269 DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARA-- 326

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT-NDMGRHGVEPDAITYSILAKGFHL 180
             ML    +P+   YN LI+G  ++G  EEA +    +M   G EPDA T++I+  G   
Sbjct: 327 --MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCK 384

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A + + +++ KG +P+++TYT+LI G+C+ G+ EE  K+   M ++G  LN + 
Sbjct: 385 KGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG 444

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+ ++CK G+I +AL +  EM + G KPD+ T++ LI GLCK DK+ +A+ LY +M 
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            + +  N+  +  ++      E+I +A      +    C  D + YN +I    K G   
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           + + L  Q+  + I PSI + N LI  FC+ GKV DA + L  +   GL P  VTY + +
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N  C+ G  Q  L L   ++ K I P  VTY  +I   C +    +A QLL      G  
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFI 684

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           P++IT++ +I  F K     + F +L   W
Sbjct: 685 PNEITWSILINYFVKNNSDSEQFTILMGNW 714



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 237/473 (50%), Gaps = 9/473 (1%)

Query: 59  TPRNVYTNSIV----IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           T      NSI+    I  L + +R+ +A+  L+E       P V + N ++   CK G  
Sbjct: 227 TKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRI 286

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
             A  L   ML      DA     L+HGLC  G ++EA    + +      P+ + Y+ L
Sbjct: 287 HEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTL 342

Query: 175 AKGFHLLSQISGAWKVIQK-LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
             G+ +  +   A  ++ K ++I G +PD  T+ ++I G C+ G +   L+  + M+ +G
Sbjct: 343 INGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKG 402

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
           F+ NVI Y++L+   CK G  +EA  ++  M A GL  + V Y+ LI  LCK  K+  A+
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           Q+Y EM SK   P+ +   +++ GLC+ + + EA   +  +++   I + V YN +I  +
Sbjct: 463 QMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAF 522

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           ++L  I +A +L  ++  +      +T+N LI   CK G       L++ +    + PS 
Sbjct: 523 LRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSI 582

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            +    +N++C  G +   L  L++M  + + P  VTY  +I GLCK  + QEA+ L   
Sbjct: 583 NSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNG 642

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           +   G+ PD +TYNT+I  +C       A QLL +   +   P   T++ILI+
Sbjct: 643 LQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILIN 695



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 153/583 (26%), Positives = 273/583 (46%), Gaps = 23/583 (3%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK-YGLHPDAFSY 136
           ++ D +L   +  G  F  S+  L  IM  Y K G    A  L   M   Y   P   SY
Sbjct: 111 KMIDKLLKQMKDEGCVFKESLFIL--IMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSY 168

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N+++  L      + A     DM   G+ P   T+ ++ K F +++++  A  +++ +  
Sbjct: 169 NVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTK 228

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
            G  P+ + Y +LI    +   V E +KL E M   G + +V  ++ ++  +CK+GRI E
Sbjct: 229 HGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHE 288

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A  L   M       D +    L+ GLC+  KV +A      M SK  +PN+  +  ++ 
Sbjct: 289 AAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA----RAMLSKIPNPNTVLYNTLIN 344

Query: 317 GLCEKEMITEAR-MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
           G        EA+ + + +++++    D   +NIMIDG  K G +  A++   ++++K   
Sbjct: 345 GYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFE 404

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+++T+  LI GFCK G   +A ++++++   GL  + V Y   + A C++G IQ  L +
Sbjct: 405 PNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQM 464

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
             EM +K   P   T+  +I GLCK  K++EA+ L  DM + GV  + +TYNT+I +F +
Sbjct: 465 YGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLR 524

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
            + +++A +L+ +M        + TYN LI  LC  G  +    L+  +    I  +  +
Sbjct: 525 LELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINS 584

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMML 600
              +I + C  G V+ A+ F   M+++G    I  Y                 + F  + 
Sbjct: 585 CNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQ 644

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           + G  PD      ++  +   G      +L    + +G +P++
Sbjct: 645 AKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNE 687



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 199/394 (50%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           R G V +A  +++K+   +  +     N  + + R  +    LY ++ ++    + +T +
Sbjct: 317 RMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFN 376

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I+IDGLC++  L  A+ FL E   K F P+V++   ++  +CK G  E A  +   M   
Sbjct: 377 IMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAK 436

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           GL  +   YN LI  LC  G +++AL+   +M   G +PD  T++ L  G     ++  A
Sbjct: 437 GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEA 496

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             + + +L++G   + VTY  LI  + ++  +++  KL   M  +G  L+ I Y+ L+ +
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKA 556

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK+G  ++ LGL+ +M    + P + + +ILI   C+  KV+ A+Q   +M  + ++P+
Sbjct: 557 LCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPD 616

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              + +++ GLC+     EA   F+ L       D V YN +I  Y   G   +A QL  
Sbjct: 617 IVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLF 676

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           + +     P+ +T++ LI  F KN   ++   +L
Sbjct: 677 KGVSNGFIPNEITWSILINYFVKNNSDSEQFTIL 710


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 250/486 (51%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           S N   S+       + A   F  ML     P    +  L+  +         L  ++ M
Sbjct: 26  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              G+ P+  T +IL   F  L ++  A+ V+ K+L  G  P+I T+  LI G C  G +
Sbjct: 86  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 145

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            E L L + M+ +GF+ NV+ Y  L++ +CK G    A+ LL  ME    +PD+V Y+ +
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 205

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I  LCK  +V +A  L++EM  + ISP+ F + +++  LC            + ++ S  
Sbjct: 206 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 265

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           + +VV+++ ++D   K G + EA  +   +I++ + P++VT+N+L+ G C   ++ +A +
Sbjct: 266 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 325

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           + DT+   G  P  V+Y+T +N YC+   I++ + L +EM  K + P  VTY+ ++ GLC
Sbjct: 326 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 385

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
              +LQ+A+ L  +M   G  PD ++Y  ++   CK + L +A  LL  +   N++P   
Sbjct: 386 HVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQ 445

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            Y I+IDG+C  G+L+ A  L  +L    +      YT +I   C +G + +A   F +M
Sbjct: 446 IYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 505

Query: 580 VEKGFE 585
             KG+ 
Sbjct: 506 KRKGYS 511



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 250/524 (47%), Gaps = 2/524 (0%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L DA+            PS+     ++    K+        L   M  +G+ P+ ++ NI
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI+  C    +  A      + + G +P+  T++ L +G  +  +I     +  K++ +G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P++VTY  LI G C++G+    ++L   M     + +V+ Y+ ++ S+CK  ++ +A 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L  EM   G+ P + TY+ LI  LC   +      L NEM + +I PN      ++  L
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++  + EA    D +I      +VV YN ++DG+     + EAV+++  ++ K  +P +
Sbjct: 280 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 339

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           V++++LI G+CK  ++  A  L + +    L P+ VTY+T M+  C  G +Q  +AL  E
Sbjct: 340 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 399

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M T+   P  V+Y +++  LCK  +L EA+ LL+ +    + PD   Y  +I   C+  +
Sbjct: 400 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 459

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L  A  L + +    L P   TY I+I+GLC  G L  A  L   ++    S     Y  
Sbjct: 460 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNL 519

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
           I +      +  + +    +M+ +GF   +   T +    MLS+
Sbjct: 520 ITRGFLRNNETLRGIQLLQEMLARGFSADVS--TSTVLVEMLSD 561



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 256/522 (49%), Gaps = 3/522 (0%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DA+    +M  +    SI  +  LL +   ++H   +  L   +     P N+YT +I+I
Sbjct: 42  DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 101

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +  C   RL  A   L +       P++ + N ++   C  G       LF  M+  G  
Sbjct: 102 NSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQ 161

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  +Y  LI+GLC  GS   A+     M +   +PD + Y+ +        Q++ A+ +
Sbjct: 162 PNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNL 221

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
             +++ +G  P I TY  LI   C +   +    L   M++     NV+ +S ++ ++CK
Sbjct: 222 FSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCK 281

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++ EA  ++  M   G++P++VTY+ L+ G C + ++ +A+++++ M  K  +P+  +
Sbjct: 282 EGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVS 341

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C+ + I +A   F+ +     I + V Y+ ++ G   +G + +A+ L+ +++
Sbjct: 342 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 401

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            +   P  V++  L+   CKN ++ +A  LL  I+   ++P    YT  ++  C  G ++
Sbjct: 402 TRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELE 461

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L   + +K + P   TYT++I GLC+Q  L EA +L  +M   G +P+  TYN I 
Sbjct: 462 AARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLIT 521

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           R F +  +  +  QLL +M         +T  +L++ L  +G
Sbjct: 522 RGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 563



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 228/462 (49%), Gaps = 3/462 (0%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A  V+AK+ +L  + +I T+N+L+  L        +  L+D +       NV T   +I+
Sbjct: 113 AFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLIN 172

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           GLC+      AI  L+        P VV   +I+   CK      A  LF  M+  G+ P
Sbjct: 173 GLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISP 232

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
             F+YN LIH LC     +      N+M    + P+ + +S +        ++  A  V+
Sbjct: 233 SIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVV 292

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             ++ +G +P++VTY  L+ G+C    ++E +K+ + M+ +GF  +V++YS L++  CK 
Sbjct: 293 DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 352

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            RI++A+ L  EM    L P+ VTYS L+ GLC   ++  AI L++EM ++   P+  ++
Sbjct: 353 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 412

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             +L  LC+   + EA     ++  SN   D+ +Y I+IDG  + G +  A  L+  L  
Sbjct: 413 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 472

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K + P++ T+  +I G C+ G +A+A +L   +K  G  P+  TY      +       R
Sbjct: 473 KGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLR 532

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            + LLQEM  +       T TV+++ L      Q   Q+L +
Sbjct: 533 GIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 574


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 155/509 (30%), Positives = 268/509 (52%), Gaps = 16/509 (3%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVA 117
           R+  + + V+  LC++     A   L+  + +      P+ VS   +M   C    A+ A
Sbjct: 75  RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
            GL   M   G+  D  +Y  LI GLC A  +++A+E   +M   G+EP+ + YS L +G
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194

Query: 178 FHLLSQISGAWKVIQKLLI----KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +      SG W+ + K+ +    KG +PD+V YT LI   C++G  ++   + ++M+ +G
Sbjct: 195 YCK----SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 250

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            + NV+ Y+VL++ MCK G + EA+G+L +M   G+ PD+VTY+ LI+GL    ++ +A+
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310

Query: 294 QLYNEMCSKR--ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
            L  EM   +  + PN     +++ GLC+   + +A      +  + C+ ++V YN++I 
Sbjct: 311 WLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIG 370

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G +++  + +A++L  ++    + P   T++ LI GFCK  +V  A  LL T++  G+EP
Sbjct: 371 GLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEP 430

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH-VTYTVVIKGLCKQWKLQEAVQL 470
               Y   + A CE+G ++R   L  EM+     P   V Y+ +I G CK   L+ A +L
Sbjct: 431 ELFHYIPLLVAMCEQGMMERARNLFNEMDNNF--PLDVVAYSTMIHGACKAGDLKTAKEL 488

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L+ +   G+TPD +TY+ +I  F K  D+  A  +L QM      P  A ++ LI G   
Sbjct: 489 LKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST 548

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTI 559
            G++     L+  +   NI+L     +T+
Sbjct: 549 KGEINKVLELIREMITKNIALDSKIISTL 577



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 255/499 (51%), Gaps = 9/499 (1%)

Query: 96  PSV---VSLNAIMSRYCKLGFAEVAKGLF---CLMLKYGLHPDAFSYNILIHGLCIAGSM 149
           PSV   VS N +++  C+ G  + A  L     L       P+A SY +L+  LC     
Sbjct: 72  PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLA 131

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           ++A+     M   GV  D +TY  L +G    +++  A +++ ++   G +P++V Y+ L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + GYC+ G  E+  K+   M  +G + +V+ Y+ L+ S+CK G+  +A G++  M   GL
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           +P++VTY++LI  +CK+  V +AI +  +M  K ++P+   +  ++ GL +   + EA  
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 330 YFDSLIMSNCI--QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
             + ++    I   +VV +N +I G   +G + +A Q+   + E     ++VT+N LI G
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
             +  KV  A  L+D +   GLEP + TY+  +  +C+   + R   LL  M  + I P 
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
              Y  ++  +C+Q  ++ A  L  +M       D + Y+T+I   CK  DL+ A +LL 
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLK 490

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            +    L P + TY+I+I+    +GD++ A+ +L  +           + ++I+ +  +G
Sbjct: 491 SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKG 550

Query: 568 DVHKAMTFFCQMVEKGFEI 586
           +++K +    +M+ K   +
Sbjct: 551 EINKVLELIREMITKNIAL 569



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 227/461 (49%), Gaps = 21/461 (4%)

Query: 202 DIVTYTVLICGYCQIGNVEE-GLKLREVMLSQ--GFKLNVIAYSVLLSSMCKSGRIDEAL 258
           D V+Y  ++   C+ G+ +  G  LR + L      + N ++Y+VL+ ++C     D+A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
           GLL  M + G++ D+VTY  LIRGLC   +V KA++L  EMC   I PN   + ++L G 
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C+     +    F  +       DVV+Y  +ID   K+G   +A  +   ++ + + P++
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VT+N LI   CK G V +A  +L  +   G+ P  VTY T +    +   +   + LL+E
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 439 M--ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           M      + P  VT+  VI+GLC   ++++A Q+   M   G   + +TYN +I    + 
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
             +RKA +L+++M    LEP S TY+ILI G C    +  A+ LL ++++  I      Y
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHY 435

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLS 601
             ++ A C +G + +A   F +M +  F + +  Y+               K     ++ 
Sbjct: 436 IPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVD 494

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            G  PD     +++  F + GD+ +   +   M  SG LPD
Sbjct: 495 EGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPD 535



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 252/502 (50%), Gaps = 43/502 (8%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNS 67
           +   AV ++  M+   ++  + TY +L+  L      D   +L  ++  S    NV   S
Sbjct: 130 LADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
            ++ G C+  R +D      E + K   P VV    ++   CK+G A+ A G+  +M++ 
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           GL P+  +YN+LI+ +C  GS++EA+     M   GV PD +TY+ L KG   + ++  A
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309

Query: 188 WKVIQKLLIKGSD---PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             +++++ ++G +   P++VT+  +I G C IG + +  ++R +M   G  +N++ Y++L
Sbjct: 310 MWLLEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLL 368

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  + +  ++ +A+ L+ EM ++GL+PD  TYSILI+G CK  +V +A  L + M  + I
Sbjct: 369 IGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P  F +  +L+ +CE+ M+  AR  F+   M N        N  +D             
Sbjct: 429 EPELFHYIPLLVAMCEQGMMERARNLFNE--MDN--------NFPLD------------- 465

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
                        +V ++++I+G CK G +  A+ LL +I   GL P AVTY+  +N + 
Sbjct: 466 -------------VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFA 512

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G+++    +L++M      P    +  +I+G   + ++ + ++L+ +M    +  D  
Sbjct: 513 KSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSK 572

Query: 485 TYNTIIRSFCKCKDLRKAFQLL 506
             +T+  S     + +   Q L
Sbjct: 573 IISTLSTSLVASNEGKALLQSL 594



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 6/246 (2%)

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH-- 407
           ++ +++L  +GEA  L   L   R     V++N+++   C+ G    A  LL  + L   
Sbjct: 52  LNRHLRLLPLGEATSLLDALPSVR---DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPH 108

Query: 408 -GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
               P+AV+YT  M A C +    + + LL+ M +  +    VTY  +I+GLC   ++ +
Sbjct: 109 PACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDK 168

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           AV+L+ +M   G+ P+ + Y+++++ +CK        ++  +M    +EP    Y  LID
Sbjct: 169 AVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLID 228

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
            LC  G  K A  ++  +    +    V Y  +I   C EG V +A+    +M EKG   
Sbjct: 229 SLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAP 288

Query: 587 SIRDYT 592
            +  Y 
Sbjct: 289 DVVTYN 294



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 12/211 (5%)

Query: 394 VADARRLLDTIKLHGLEPS---AVTYTTFMNAYCEEGNIQRLLALLQEMETK---AIGPT 447
           + +A  LLD +      PS   AV+Y T + A C  G+  R  ALL+ M  +   A  P 
Sbjct: 61  LGEATSLLDAL------PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPN 114

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            V+YTV+++ LC      +AV LL  M   GV  D +TY T+IR  C   ++ KA +L+ 
Sbjct: 115 AVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMG 174

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M    +EP    Y+ L+ G C +G  ++   + V + E  I    V YT +I + C  G
Sbjct: 175 EMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVG 234

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
              KA      MV +G E ++  Y     CM
Sbjct: 235 KAKKAHGVMDMMVRRGLEPNVVTYNVLINCM 265



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 4/245 (1%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           G +  A  V A M+E    V++ TYN L   L  +       +L D++       + +T 
Sbjct: 341 GRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTY 400

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           SI+I G C+  ++  A   L     +   P +     ++   C+ G  E A+ LF  M  
Sbjct: 401 SILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-D 459

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
                D  +Y+ +IHG C AG ++ A E    +   G+ PDA+TYSI+   F     +  
Sbjct: 460 NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEA 519

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  V++++   G  PD+  +  LI GY   G + + L+L   M+++   L+    S L +
Sbjct: 520 ANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLST 579

Query: 247 SMCKS 251
           S+  S
Sbjct: 580 SLVAS 584


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 155/509 (30%), Positives = 268/509 (52%), Gaps = 16/509 (3%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVA 117
           R+  + + V+  LC++     A   L+  + +      P+ VS   +M   C    A+ A
Sbjct: 75  RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
            GL   M   G+  D  +Y  LI GLC A  +++A+E   +M   G+EP+ + YS L +G
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194

Query: 178 FHLLSQISGAWKVIQKLLI----KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +      SG W+ + K+ +    KG +PD+V YT LI   C++G  ++   + ++M+ +G
Sbjct: 195 YCK----SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 250

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            + NV+ Y+VL++ MCK G + EA+G+L +M   G+ PD+VTY+ LI+GL    ++ +A+
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310

Query: 294 QLYNEMCSKR--ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
            L  EM   +  + PN     +++ GLC+   + +A      +  + C+ ++V YN++I 
Sbjct: 311 WLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIG 370

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G +++  + +A++L  ++    + P   T++ LI GFCK  +V  A  LL T++  G+EP
Sbjct: 371 GLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEP 430

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH-VTYTVVIKGLCKQWKLQEAVQL 470
               Y   + A CE+G ++R   L  EM+     P   V Y+ +I G CK   L+ A +L
Sbjct: 431 ELFHYIPLLVAMCEQGMMERARNLFNEMDNNF--PLDVVAYSTMIHGACKAGDLKTAKEL 488

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L+ +   G+TPD +TY+ +I  F K  D+  A  +L QM      P  A ++ LI G   
Sbjct: 489 LKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST 548

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTI 559
            G++     L+  +   NI+L     +T+
Sbjct: 549 KGEINKVLELIREMITKNIALDSKIISTL 577



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 255/499 (51%), Gaps = 9/499 (1%)

Query: 96  PSV---VSLNAIMSRYCKLGFAEVAKGLFCLM---LKYGLHPDAFSYNILIHGLCIAGSM 149
           PSV   VS N +++  C+ G  + A  L   M         P+A SY +L+  LC     
Sbjct: 72  PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLA 131

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           ++A+     M   GV  D +TY  L +G    +++  A +++ ++   G +P++V Y+ L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + GYC+ G  E+  K+   M  +G + +V+ Y+ L+ S+CK G+  +A G++  M   GL
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           +P++VTY++LI  +CK+  V +AI +  +M  K ++P+   +  ++ GL +   + EA  
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 330 YFDSLIMSNCI--QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
             + ++    I   +VV +N +I G   +G + +A Q+   + E     ++VT+N LI G
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
             +  KV  A  L+D +   GLEP + TY+  +  +C+   + R   LL  M  + I P 
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
              Y  ++  +C+Q  ++ A  L  +M       D + Y+T+I   CK  DL+ A +LL 
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLK 490

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            +    L P + TY+I+I+    +GD++ A+ +L  +           + ++I+ +  +G
Sbjct: 491 SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKG 550

Query: 568 DVHKAMTFFCQMVEKGFEI 586
           +++K +    +M+ K   +
Sbjct: 551 EINKVLELIREMITKNIAL 569



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 227/461 (49%), Gaps = 21/461 (4%)

Query: 202 DIVTYTVLICGYCQIGNVEE-GLKLREVMLSQ--GFKLNVIAYSVLLSSMCKSGRIDEAL 258
           D V+Y  ++   C+ G+ +  G  LR + L      + N ++Y+VL+ ++C     D+A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
           GLL  M + G++ D+VTY  LIRGLC   +V KA++L  EMC   I PN   + ++L G 
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C+     +    F  +       DVV+Y  +ID   K+G   +A  +   ++ + + P++
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VT+N LI   CK G V +A  +L  +   G+ P  VTY T +    +   +   + LL+E
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 439 M--ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           M      + P  VT+  VI+GLC   ++++A Q+   M   G   + +TYN +I    + 
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
             +RKA +L+++M    LEP S TY+ILI G C    +  A+ LL ++++  I      Y
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHY 435

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLS 601
             ++ A C +G + +A   F +M +  F + +  Y+               K     ++ 
Sbjct: 436 IPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVD 494

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            G  PD     +++  F + GD+ +   +   M  SG LPD
Sbjct: 495 EGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPD 535



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 251/498 (50%), Gaps = 43/498 (8%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           AV ++  M+   ++  + TY +L+  L      D   +L  ++  S    NV   S ++ 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           G C+  R +D      E + K   P VV    ++   CK+G A+ A G+  +M++ GL P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           +  +YN+LI+ +C  GS++EA+     M   GV PD +TY+ L KG   + ++  A  ++
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 192 QKLLIKGSD---PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +++ ++G +   P++VT+  +I G C IG + +  ++R +M   G  +N++ Y++L+  +
Sbjct: 314 EEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
            +  ++ +A+ L+ EM ++GL+PD  TYSILI+G CK  +V +A  L + M  + I P  
Sbjct: 373 LRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPEL 432

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F +  +L+ +CE+ M+  AR  F+   M N        N  +D                 
Sbjct: 433 FHYIPLLVAMCEQGMMERARNLFNE--MDN--------NFPLD----------------- 465

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
                    +V ++++I+G CK G +  A+ LL +I   GL P AVTY+  +N + + G+
Sbjct: 466 ---------VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGD 516

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           ++    +L++M      P    +  +I+G   + ++ + ++L+ +M    +  D    +T
Sbjct: 517 MEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIIST 576

Query: 489 IIRSFCKCKDLRKAFQLL 506
           +  S     + +   Q L
Sbjct: 577 LSTSLVASNEGKALLQSL 594



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 6/246 (2%)

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH-- 407
           ++ +++L  +GEA  L   L   R     V++N+++   C+ G    A  LL  + L   
Sbjct: 52  LNRHLRLLPLGEATSLLDALPSVR---DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPH 108

Query: 408 -GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
               P+AV+YT  M A C +    + + LL+ M +  +    VTY  +I+GLC   ++ +
Sbjct: 109 PACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDK 168

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           AV+L+ +M   G+ P+ + Y+++++ +CK        ++  +M    +EP    Y  LID
Sbjct: 169 AVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLID 228

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
            LC  G  K A  ++  +    +    V Y  +I   C EG V +A+    +M EKG   
Sbjct: 229 SLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAP 288

Query: 587 SIRDYT 592
            +  Y 
Sbjct: 289 DVVTYN 294



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 12/211 (5%)

Query: 394 VADARRLLDTIKLHGLEPS---AVTYTTFMNAYCEEGNIQRLLALLQEMETK---AIGPT 447
           + +A  LLD +      PS   AV+Y T + A C  G+  R  ALL+ M  +   A  P 
Sbjct: 61  LGEATSLLDAL------PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPN 114

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            V+YTV+++ LC      +AV LL  M   GV  D +TY T+IR  C   ++ KA +L+ 
Sbjct: 115 AVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMG 174

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M    +EP    Y+ L+ G C +G  ++   + V + E  I    V YT +I + C  G
Sbjct: 175 EMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVG 234

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
              KA      MV +G E ++  Y     CM
Sbjct: 235 KAKKAHGVMDMMVRRGLEPNVVTYNVLINCM 265



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 4/245 (1%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           G +  A  V A M+E    V++ TYN L   L  +       +L D++       + +T 
Sbjct: 341 GRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTY 400

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           SI+I G C+  ++  A   L     +   P +     ++   C+ G  E A+ LF  M  
Sbjct: 401 SILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-D 459

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
                D  +Y+ +IHG C AG ++ A E    +   G+ PDA+TYSI+   F     +  
Sbjct: 460 NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEA 519

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  V++++   G  PD+  +  LI GY   G + + L+L   M+++   L+    S L +
Sbjct: 520 ANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLST 579

Query: 247 SMCKS 251
           S+  S
Sbjct: 580 SLVAS 584


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 250/486 (51%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           S N   S+       + A   F  ML     P    +  L+  +         L  ++ M
Sbjct: 35  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              G+ P+  T +IL   F  L ++  A+ V+ K+L  G  P+I T+  LI G C  G +
Sbjct: 95  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 154

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            E L L + M+ +GF+ NV+ Y  L++ +CK G    A+ LL  ME    +PD+V Y+ +
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 214

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I  LCK  +V +A  L++EM  + ISP+ F + +++  LC            + ++ S  
Sbjct: 215 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 274

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           + +VV+++ ++D   K G + EA  +   +I++ + P++VT+N+L+ G C   ++ +A +
Sbjct: 275 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 334

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           + DT+   G  P  V+Y+T +N YC+   I++ + L +EM  K + P  VTY+ ++ GLC
Sbjct: 335 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 394

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
              +LQ+A+ L  +M   G  PD ++Y  ++   CK + L +A  LL  +   N++P   
Sbjct: 395 HVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQ 454

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            Y I+IDG+C  G+L+ A  L  +L    +      YT +I   C +G + +A   F +M
Sbjct: 455 IYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 514

Query: 580 VEKGFE 585
             KG+ 
Sbjct: 515 KRKGYS 520



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 250/524 (47%), Gaps = 2/524 (0%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L DA+            PS+     ++    K+        L   M  +G+ P+ ++ NI
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI+  C    +  A      + + G +P+  T++ L +G  +  +I     +  K++ +G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P++VTY  LI G C++G+    ++L   M     + +V+ Y+ ++ S+CK  ++ +A 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L  EM   G+ P + TY+ LI  LC   +      L NEM + +I PN      ++  L
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++  + EA    D +I      +VV YN ++DG+     + EAV+++  ++ K  +P +
Sbjct: 289 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 348

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           V++++LI G+CK  ++  A  L + +    L P+ VTY+T M+  C  G +Q  +AL  E
Sbjct: 349 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 408

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M T+   P  V+Y +++  LCK  +L EA+ LL+ +    + PD   Y  +I   C+  +
Sbjct: 409 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L  A  L + +    L P   TY I+I+GLC  G L  A  L   ++    S     Y  
Sbjct: 469 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNL 528

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
           I +      +  + +    +M+ +GF   +   T +    MLS+
Sbjct: 529 ITRGFLRNNETLRGIQLLQEMLARGFSADVS--TSTVLVEMLSD 570



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 256/522 (49%), Gaps = 3/522 (0%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DA+    +M  +    SI  +  LL +   ++H   +  L   +     P N+YT +I+I
Sbjct: 51  DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 110

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +  C   RL  A   L +       P++ + N ++   C  G       LF  M+  G  
Sbjct: 111 NSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQ 170

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  +Y  LI+GLC  GS   A+     M +   +PD + Y+ +        Q++ A+ +
Sbjct: 171 PNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNL 230

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
             +++ +G  P I TY  LI   C +   +    L   M++     NV+ +S ++ ++CK
Sbjct: 231 FSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCK 290

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++ EA  ++  M   G++P++VTY+ L+ G C + ++ +A+++++ M  K  +P+  +
Sbjct: 291 EGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVS 350

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C+ + I +A   F+ +     I + V Y+ ++ G   +G + +A+ L+ +++
Sbjct: 351 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 410

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            +   P  V++  L+   CKN ++ +A  LL  I+   ++P    YT  ++  C  G ++
Sbjct: 411 TRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELE 470

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L   + +K + P   TYT++I GLC+Q  L EA +L  +M   G +P+  TYN I 
Sbjct: 471 AARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLIT 530

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           R F +  +  +  QLL +M         +T  +L++ L  +G
Sbjct: 531 RGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 572



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 228/462 (49%), Gaps = 3/462 (0%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A  V+AK+ +L  + +I T+N+L+  L        +  L+D +       NV T   +I+
Sbjct: 122 AFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLIN 181

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           GLC+      AI  L+        P VV   +I+   CK      A  LF  M+  G+ P
Sbjct: 182 GLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISP 241

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
             F+YN LIH LC     +      N+M    + P+ + +S +        ++  A  V+
Sbjct: 242 SIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVV 301

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             ++ +G +P++VTY  L+ G+C    ++E +K+ + M+ +GF  +V++YS L++  CK 
Sbjct: 302 DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 361

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            RI++A+ L  EM    L P+ VTYS L+ GLC   ++  AI L++EM ++   P+  ++
Sbjct: 362 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 421

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             +L  LC+   + EA     ++  SN   D+ +Y I+IDG  + G +  A  L+  L  
Sbjct: 422 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 481

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K + P++ T+  +I G C+ G +A+A +L   +K  G  P+  TY      +       R
Sbjct: 482 KGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLR 541

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            + LLQEM  +       T TV+++ L      Q   Q+L +
Sbjct: 542 GIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 583


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 143/457 (31%), Positives = 243/457 (53%), Gaps = 3/457 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I GLC+  +   A   ++        P V++ N ++S YCK G  E+   L  L+ +  
Sbjct: 151 LIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTG--EIGSALQ-LLDRMS 207

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + PD  +YN ++  LC +G ++EA+E  +   +    PD ITY+IL +     S +  A 
Sbjct: 208 VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAM 267

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           K++ ++  KG  PD+VTY VLI G C+ G ++E ++    M S G + NVI ++++L SM
Sbjct: 268 KLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSM 327

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C +GR  +A   L EM   G  P +VT++ILI  LC++  + +AI +  +M     +PNS
Sbjct: 328 CSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNS 387

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
            ++  +L  LC+ + +  A  Y D ++   C  D+V YN ++    K G +  AV++  Q
Sbjct: 388 LSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 447

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           L  K  SP ++T+N++I G  K GK  DA +LLD +K  GL+P  +TY+T +     EG 
Sbjct: 448 LGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGK 507

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +   +A   ++E   + P  +TY  ++ GLCK  +   A+  L  M   G  P + +Y  
Sbjct: 508 VDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMI 567

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           +I         ++A +LLN++    +   S+   +++
Sbjct: 568 LIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVV 604



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 250/489 (51%), Gaps = 3/489 (0%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           L +   L++   FL++   +   P +++  +++   CK G    A  +  ++   G  PD
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
             +YN+LI G C  G +  AL+    + R  V PD +TY+ + +      ++  A +V+ 
Sbjct: 180 VITYNVLISGYCKTGEIGSALQL---LDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           + + +   PD++TYT+LI   C+   V + +KL + M  +G K +V+ Y+VL++ +CK G
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           R+DEA+  L  M + G +P+++T++I++R +C   +   A +   EM  K  SP+     
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC K +I  A    + +    C  + + YN ++    K   +  A++    ++ +
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P IVT+N+L+   CK+GKV  A  +L+ +   G  P  +TY T ++   + G     
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDA 476

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           + LL EM+ K + P  +TY+ ++ GL ++ K+ EA+    D+  +GV P+ ITYN+I+  
Sbjct: 477 IKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLG 536

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            CK +   +A   L  M     +PT  +Y ILI+GL   G  K A  LL  L    +   
Sbjct: 537 LCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKK 596

Query: 553 KVAYTTIIK 561
             A   ++K
Sbjct: 597 SSAEQVVVK 605



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 236/460 (51%), Gaps = 3/460 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G  PD  +   LI GLC  G   +A      +   G  PD ITY++L  G+    +
Sbjct: 136 MVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGE 195

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I  A +++ ++ +    PD+VTY  ++   C  G ++E +++ +  + +    +VI Y++
Sbjct: 196 IGSALQLLDRMSV---SPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTI 252

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+ + CK   + +A+ LL EM   G KPD+VTY++LI G+CK+ ++ +AI+  N M S  
Sbjct: 253 LIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYG 312

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN   H  IL  +C      +A  +   +I   C   VV +NI+I+   + G IG A+
Sbjct: 313 CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAI 372

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +  ++ +   +P+ +++N L++  CK+ K+  A   LD +   G  P  VTY T + A 
Sbjct: 373 DVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTAL 432

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++G +   + +L ++ +K   P  +TY  VI GL K  K  +A++LL++M   G+ PD 
Sbjct: 433 CKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDI 492

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           ITY+T++    +   + +A    + +    ++P + TYN ++ GLC       A   L  
Sbjct: 493 ITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAY 552

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +       T+ +Y  +I+    EG   +A+    ++  +G
Sbjct: 553 MVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRG 592



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 196/376 (52%), Gaps = 3/376 (0%)

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G +EEG K  E M+ +G   ++IA + L+  +CK+G+  +A  ++  +E  G  PD++TY
Sbjct: 124 GELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITY 183

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           ++LI G CK  ++  A+QL + M    +SP+   +  IL  LC+   + EA    D  + 
Sbjct: 184 NVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQ 240

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
             C  DV+ Y I+I+   K   +G+A++L  ++ +K   P +VT+N LI G CK G++ +
Sbjct: 241 RECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A R L+ +  +G +P+ +T+   + + C  G        L EM  K   P+ VT+ ++I 
Sbjct: 301 AIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILIN 360

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
            LC++  +  A+ +LE M   G TP+ ++YN ++ + CK K + +A + L+ M      P
Sbjct: 361 FLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYP 420

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              TYN L+  LC +G +  A  +L  L     S   + Y T+I      G    A+   
Sbjct: 421 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLL 480

Query: 577 CQMVEKGFEISIRDYT 592
            +M  KG +  I  Y+
Sbjct: 481 DEMKGKGLKPDIITYS 496



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 236/487 (48%), Gaps = 41/487 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           +TG    A  V+  +++      + TYN L+     T  +     L D + VS    +V 
Sbjct: 157 KTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSP---DVV 213

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + ++  LC   +L++A+  L     +E  P V++   ++   CK      A  L   M
Sbjct: 214 TYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEM 273

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G  PD  +YN+LI+G+C  G ++EA+ F N M  +G +P+ IT++I+ +      + 
Sbjct: 274 RDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRW 333

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A K + +++ KG  P +VT+ +LI   C+ G +   + + E M   G   N ++Y+ L
Sbjct: 334 MDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPL 393

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L ++CK  +++ A+  L  M + G  PD+VTY+ L+  LCK  KV  A+++ N++ SK  
Sbjct: 394 LHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGC 453

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SP                                    ++ YN +IDG  K+G   +A++
Sbjct: 454 SPV-----------------------------------LITYNTVIDGLSKVGKTDDAIK 478

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L  ++  K + P I+T+++L+ G  + GKV +A      ++  G++P+A+TY + M   C
Sbjct: 479 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 538

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +     R +  L  M  +   PT  +Y ++I+GL  +   +EA++LL ++   GV     
Sbjct: 539 KARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSS 598

Query: 485 TYNTIIR 491
               +++
Sbjct: 599 AEQVVVK 605



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 38/339 (11%)

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L  + ++G ++E    L +M   G  PD++  + LIRGLCK  K  KA ++         
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRV--------- 167

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
                                      + L  S  + DV+ YN++I GY K G IG A+Q
Sbjct: 168 --------------------------MEILEDSGAVPDVITYNVLISGYCKTGEIGSALQ 201

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L  ++    +SP +VT+N+++   C +GK+ +A  +LD        P  +TYT  + A C
Sbjct: 202 LLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATC 258

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +E  + + + LL EM  K   P  VTY V+I G+CK+ +L EA++ L  M   G  P+ I
Sbjct: 259 KESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVI 318

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           T+N I+RS C       A + L +M      P+  T+NILI+ LC  G +  A  +L  +
Sbjct: 319 THNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKM 378

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +H  +   ++Y  ++ A C +  + +A+ +   MV +G
Sbjct: 379 PQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRG 417



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 125/302 (41%), Gaps = 38/302 (12%)

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP------------SAVTYTTFM 420
           R  P + TF+S       NG+++   + L T  L+G                 V     +
Sbjct: 66  RAVPRVDTFSS-------NGRLSHGEKNLHT-HLNGSSSSSSSYSNHSQSSEEVENNNHL 117

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
                 G ++     L++M  +   P  +  T +I+GLCK  K  +A +++E +   G  
Sbjct: 118 RRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAV 177

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD ITYN +I  +CK  ++  A QLL++M   ++ P   TYN ++  LC +G LK A  +
Sbjct: 178 PDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEV 234

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------- 593
           L    +       + YT +I+A C E  V +AM    +M +KG +  +  Y         
Sbjct: 235 LDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICK 294

Query: 594 --------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                    F   M S G  P+     ++L +    G      +  A MI+ G  P    
Sbjct: 295 EGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVT 354

Query: 646 IN 647
            N
Sbjct: 355 FN 356


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 252/521 (48%), Gaps = 32/521 (6%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+  S N ++          VA  +F  ML  G+ P  +++ +++  LC+   ++ A   
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             DM +HG  P+++ Y  L        +++ A K+++++ + G  PD+ T+  +I G C+
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC-------------------------- 249
           +  + EG KL + ML +GF  N I Y VL++ +C                          
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTIL 350

Query: 250 -----KSGRIDEALGLLYE-MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
                KSGR+DEA   LY+ M   G +PD+ T++ LI GLCK+  +  A+ + N+M +  
Sbjct: 351 INGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANG 410

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +PN   +  +L G C+K  + EA    + +       +++ YN+++    K G + +A+
Sbjct: 411 CTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKAL 470

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +  ++ +K   P I TFN+LI+G CK  +  DA  L   + L G+  + VTY T ++A+
Sbjct: 471 DMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAF 530

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
              G IQ  L L+ +M  +      +TY  +IK  CK    ++A+ L ++M    + P  
Sbjct: 531 LRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSN 590

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           I+ N +I   C+   +  A +LL  M    L P   TYN LI+GLC  G+++ A  L   
Sbjct: 591 ISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNK 650

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           LQ   I    + Y T+I  HC  G    A     + VE  F
Sbjct: 651 LQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAF 691



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 230/435 (52%), Gaps = 5/435 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T + VI GLC+ +R+ +    +     + F P+ ++   +M+  C++G  + A+   
Sbjct: 277 DVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQ--- 333

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND-MGRHGVEPDAITYSILAKGFHL 180
            ++L     P+   + ILI+G   +G ++EA  F  D M ++G  PD  T++ L  G   
Sbjct: 334 -VLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCK 392

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A  ++  +   G  P+++TYT L+ G+C+   +EE   +   M ++GF+LN++ 
Sbjct: 393 KGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMG 452

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+VLL ++CK+G++ +AL +L EM   G KPD+ T++ LI GLCK D+   A+ LY +M 
Sbjct: 453 YNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDML 512

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
              +  N+  +  ++        I EA    + ++   C  D + YN +I  + KLG   
Sbjct: 513 LDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATE 572

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A+ L+ +++ K + PS ++ N LI G C+ GKV +A  LL  +   GL P  VTY + +
Sbjct: 573 KALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLI 632

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N  C+ GNI+    L  +++ + I P  +TY  +I   C+     +A  LL         
Sbjct: 633 NGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFI 692

Query: 481 PDQITYNTIIRSFCK 495
           P+ +T+  ++ +F K
Sbjct: 693 PNDVTWYILVSNFIK 707



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 237/459 (51%), Gaps = 8/459 (1%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNV 63
           S+   V++A+ ++ +M  +     + T+N ++Y L   + + +   L D +       N 
Sbjct: 254 SKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPND 313

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG-LFC 122
            T  ++++GLC+  ++ +A + L +       P+ V    +++ Y K G  + A   L+ 
Sbjct: 314 ITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVHFTILINGYVKSGRLDEANAFLYD 369

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+K G  PD F++N LIHGLC  G M  A++  NDM  +G  P+ ITY+ L  GF   +
Sbjct: 370 KMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKN 429

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           Q+  A  V+ ++  KG + +I+ Y VL+   C+ G V + L +   M  +G K ++  ++
Sbjct: 430 QLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFN 489

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +CK  R ++AL L  +M   G+  + VTY+ LI    +   + +A++L N+M  +
Sbjct: 490 TLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFR 549

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
               +   +  ++   C+     +A   FD ++  + +   +  N++I+G  ++G +  A
Sbjct: 550 GCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNA 609

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++L R +I + ++P +VT+NSLI G CK G + +A  L + ++  G++P A+TY T +  
Sbjct: 610 LELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICW 669

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           +C  G       LL      A  P  VT+ +++    K+
Sbjct: 670 HCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE 708



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 238/504 (47%), Gaps = 46/504 (9%)

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           KG++C        P   SYN+++  L  A     A     +M   GV P   T+ ++ K 
Sbjct: 164 KGVYCC------EPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKA 217

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
             +++++  A  +++ +   G  P+ V Y  LI    +   V E LKL E M   G   +
Sbjct: 218 LCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPD 277

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V  ++ ++  +C+  RI E   L+  M   G  P+ +TY +L+ GLC+  KV +A  L N
Sbjct: 278 VDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLN 337

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMY-FDSLIMSNCIQDVVLYNIMIDGYVKL 356
               K  +PN      ++ G  +   + EA  + +D +I + C  DV  +N +I G  K 
Sbjct: 338 ----KVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKK 393

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G +G AV +   +     +P+++T+ +L+ GFCK  ++ +A  +L+ +   G E + + Y
Sbjct: 394 GLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGY 453

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK------------- 463
              + A C+ G + + L +L EM  K   P   T+  +I GLCK  +             
Sbjct: 454 NVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLL 513

Query: 464 ----------------------LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
                                 +QEA++L+ DM   G   D+ITYN +I++FCK     K
Sbjct: 514 DGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEK 573

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A  L ++M   +L P++ + N+LI+GLC  G + NA  LL  +    ++   V Y ++I 
Sbjct: 574 ALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLIN 633

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFE 585
             C  G++ +A   F ++  +G +
Sbjct: 634 GLCKMGNIREAFNLFNKLQAEGIQ 657



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 145/353 (41%), Gaps = 52/353 (14%)

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
            RM  D   +  C      YN+++D  V       A  ++ +++ K + P++ TF  ++ 
Sbjct: 157 TRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMK 216

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             C   +V +A  LL  +  HG  P++V Y T ++A  +   +   L LL+EM      P
Sbjct: 217 ALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLP 276

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              T+  VI GLC+  ++ E  +L++ M   G TP+ ITY  ++   C+   + +A  LL
Sbjct: 277 DVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLL 336

Query: 507 NQMWLHN--------------------------------LEPTSATYNILIDGLCVNGDL 534
           N++   N                                  P   T+N LI GLC  G +
Sbjct: 337 NKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLM 396

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
            +A  ++  +  +  +   + YTT++   C +  + +A     +M  KGFE++I  Y   
Sbjct: 397 GSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYN-- 454

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                             V+L A  + G +    ++   M   G  PD F  N
Sbjct: 455 ------------------VLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFN 489



 Score = 38.9 bits (89), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 1/150 (0%)

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY-VIGVTPDQITYNTIIRSF 493
           LL +++ + I      +  ++K   +     +A ++L DM  V    P   +YN ++   
Sbjct: 124 LLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDIL 183

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
                   A  +  +M    + PT  T+ +++  LC+  ++ NA  LL  + +H      
Sbjct: 184 VSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNS 243

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           V Y T+I A      V++A+    +M   G
Sbjct: 244 VVYQTLIHALSKRDRVNEALKLLEEMFLMG 273


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 147/507 (28%), Positives = 254/507 (50%), Gaps = 19/507 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS V  N +++   K+        L   M  +G+ P+ ++ +ILI+  C    +  A   
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              + + G +PD  T++ L +G  +  +I  A  +  K++ +G  PD+VTY  LI G C+
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +GN    ++L   M+ +  + NV AY+ ++ S+CK  ++ EA  L  EM   G+ PD+ T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI  LC   +      L NEM   +I P+  +   ++  LC++  +TEA    D +I
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV- 394
                 +VV Y  ++DG+  L  + EAV+++  ++ K   P+++++N+LI G+CK  ++ 
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 395 ------------------ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
                              +A ++ DT+   G  P+ ++Y T +N YC+   I + + L 
Sbjct: 359 KAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF 418

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
            EM  + + P  VTY+ +I GLC   +LQ+A+ L  +M      P+ +TY  ++   CK 
Sbjct: 419 GEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKN 478

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
           + L +A  LL  +   NL+P     NI IDG+C  G+L+ A  L  +L    +      Y
Sbjct: 479 RYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTY 538

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           + +I   C  G + +A   F +M E G
Sbjct: 539 SIMINGLCRRGLLDEASKLFREMDENG 565



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 149/531 (28%), Positives = 260/531 (48%), Gaps = 23/531 (4%)

Query: 93  EFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
            FG  P++ +L+ +++ +C L     A  +   +LK G  PD  ++  LI G+C+ G + 
Sbjct: 89  SFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIG 148

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           EAL   + M   G  PD +TY  L  G   +   S A +++  ++ K   P++  Y  +I
Sbjct: 149 EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 208

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
              C+   V E   L   M+++G   ++  Y+ L+ ++C          LL EM    + 
Sbjct: 209 DSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM 268

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD+V+++ ++  LCK+ KV +A  + ++M  + + PN   + A++ G C    + EA   
Sbjct: 269 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKV 328

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLG-------------------NIGEAVQLYRQLIE 371
           FD+++   C+ +V+ YN +I+GY K+                    N+ EAV+++  ++ 
Sbjct: 329 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVC 388

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K   P+++++N+LI G+CK  ++  A  L   +    L P  VTY+T ++  C    +Q 
Sbjct: 389 KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD 448

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            +AL  EM   +  P  VTY +++  LCK   L EA+ LL+ +    + PD    N  I 
Sbjct: 449 AIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 508

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
             C+  +L  A  L + +    L+P   TY+I+I+GLC  G L  A  L   + E+  +L
Sbjct: 509 GMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTL 568

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
               Y TI +      +  +A+    +MV +GF  S    T + F  MLS+
Sbjct: 569 NGCIYNTITRGFLRNNETSRAIQLLQEMVARGF--SADASTMTLFVKMLSD 617



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 230/480 (47%), Gaps = 21/480 (4%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T   +I+GLC+      AI  L     K   P+V + N I+   CK      A  LF
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G+ PD F+YN LIH LC     +      N+M    + PD ++++ +       
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +++ A  V+ K++ +G +P++VTYT L+ G+C +  ++E +K+ + M+ +G   NVI+Y
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344

Query: 242 SVLLSSMCKSGRID-------------------EALGLLYEMEAVGLKPDLVTYSILIRG 282
           + L++  CK  RID                   EA+ +   M   G  P++++Y+ LI G
Sbjct: 345 NTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLING 404

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
            CK  ++ KA+ L+ EMC + + P++  +  ++ GLC  E + +A   F  ++  + I +
Sbjct: 405 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 464

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           +V Y I++D   K   + EA+ L + +    + P I   N  I G C+ G++  AR L  
Sbjct: 465 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFS 524

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   GL+P   TY+  +N  C  G +     L +EM+          Y  + +G  +  
Sbjct: 525 NLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 584

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ--MWLHNLEPTSAT 520
           +   A+QLL++M   G + D  T    ++        +   Q+L     W+   + +S+T
Sbjct: 585 ETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRNGCKWISTFDSSSST 644



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 232/486 (47%), Gaps = 22/486 (4%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G + +A+ +  KM     +  + TY +L+  L    +T     L   +       NV+  
Sbjct: 145 GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 204

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +ID LC+  ++ +A     E   K   P + + N+++   C L   +    L   M+ 
Sbjct: 205 NTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD 264

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + PD  S+N ++  LC  G + EA +  + M + GVEP+ +TY+ L  G  LLS++  
Sbjct: 265 SKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDE 324

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIG-------------------NVEEGLKLRE 227
           A KV   ++ KG  P++++Y  LI GYC+I                    N++E +K+ +
Sbjct: 325 AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFD 384

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M+ +G   NVI+Y+ L++  CK  RID+A+ L  EM    L PD VTYS LI GLC  +
Sbjct: 385 TMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVE 444

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           ++  AI L++EM +    PN   +  +L  LC+   + EA     ++  SN   D+ + N
Sbjct: 445 RLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNN 504

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           I IDG  + G +  A  L+  L  K + P + T++ +I G C+ G + +A +L   +  +
Sbjct: 505 IAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDEN 564

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G   +   Y T    +       R + LLQEM  +       T T+ +K L      Q  
Sbjct: 565 GCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSL 624

Query: 468 VQLLED 473
            Q+L +
Sbjct: 625 KQILRN 630



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/575 (24%), Positives = 264/575 (45%), Gaps = 22/575 (3%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A+    +M  +    S   +N LL +   ++H   +  L   +     P N+YT  I+I+
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
             C  +R+  A   L +       P   +   ++   C  G    A  LF  M+  G  P
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRP 164

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  +Y  LI+GLC  G+   A+     M +   +P+   Y+ +        Q++ A+ + 
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            +++ KG  PDI TY  LI   C +   +    L   M+      +V++++ ++ ++CK 
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G++ EA  ++ +M   G++P++VTY+ L+ G C   ++ +A+++++ M  K   PN  ++
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344

Query: 312 GAILLGLCEKEMITEARMY-------------------FDSLIMSNCIQDVVLYNIMIDG 352
             ++ G C+ + I +A  Y                   FD+++   C+ +V+ YN +I+G
Sbjct: 345 NTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLING 404

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           Y K+  I +A+ L+ ++  + + P  VT+++LI+G C   ++ DA  L   +      P+
Sbjct: 405 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 464

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            VTY   ++  C+   +   +ALL+ +E   + P      + I G+C+  +L+ A  L  
Sbjct: 465 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFS 524

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           ++   G+ PD  TY+ +I   C+   L +A +L  +M  +        YN +  G   N 
Sbjct: 525 NLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 584

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +   A  LL  +     S      T  +K    +G
Sbjct: 585 ETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 229/502 (45%), Gaps = 35/502 (6%)

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
           +K  H  + I GA     ++L     P  V +  L+    ++ +    L L   M S G 
Sbjct: 34  SKSLHF-NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGI 92

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             N+    +L++S C   R+  A  +L ++  +G +PD  T++ LIRG+C + K+ +A+ 
Sbjct: 93  PPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALH 152

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L+++M  +   P+   +G ++ GLC+    + A     S++  NC  +V  YN +ID   
Sbjct: 153 LFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLC 212

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K   + EA  L+ +++ K ISP I T+NSLI+  C   +      LL+ +    + P  V
Sbjct: 213 KDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVV 272

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           ++ T ++A C+EG +     ++ +M  + + P  VTYT ++ G C   ++ EAV++ + M
Sbjct: 273 SFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTM 332

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAF-------------------QLLNQMWLHNLE 515
              G  P+ I+YNT+I  +CK + + KA                    ++ + M      
Sbjct: 333 VCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCM 392

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   +YN LI+G C    +  A  L   +    +    V Y+T+I   C    +  A+  
Sbjct: 393 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 452

Query: 576 FCQMVEKGFEISIRDYT--KSFFC--------MML-----SNGFPPDQEICEVMLIAFHQ 620
           F +MV      ++  Y     + C        M L      +   PD ++  + +    +
Sbjct: 453 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 512

Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
            G+L +  +L + +   GL PD
Sbjct: 513 AGELEAARDLFSNLSSKGLQPD 534



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 20/181 (11%)

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A+     M  +   P  + +N ++ S  K K       L +QM    + P   T +ILI+
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
             C    +  A  +L  + +         +TT+I+  C EG + +A+  F +M+      
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMI------ 158

Query: 587 SIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
                           GF PD      ++    + G+  +   L   M++    P+ F  
Sbjct: 159 --------------GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 204

Query: 647 N 647
           N
Sbjct: 205 N 205


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 140/443 (31%), Positives = 238/443 (53%), Gaps = 7/443 (1%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M K+G  P+  +YN L+ GLC  G M +A      M + G  PD +TY+ L  GF  + +
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A K+    + +G  PD+VTY  LI G+C+   ++E  ++ + M+S+    +V+ Y+ 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK-VHKAIQLYNEMCSK 302
           L++ +CK+GR+DEA  L+ +    G  P+++TYS LI GLC++ + V +A++L+  +  +
Sbjct: 121 LVNGLCKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P    +  ++ GL +++ + EA   F  L+      D + Y + IDG  K G + +A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + + + + EK   P +V+ N++I G CK  +V +A  LL  ++  G  P+A+++ T +  
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK---QWKLQEAVQLLEDMYVIGV 479
            C  G  ++ +   +EM  + + PT VTY +++ GLCK   + +++EA+ L + M   G 
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD +TY+ +I    K   L  A +LL  M      P   TYN LI GLC    +  A  
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417

Query: 540 LLVSLQEHNISLTKVAYTTIIKA 562
           L V++ E       + Y TII A
Sbjct: 418 LFVAMVEKGCVPDTITYGTIISA 440



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 143/436 (32%), Positives = 237/436 (54%), Gaps = 7/436 (1%)

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           F P+ ++ NA++S  C  G    A+ L+  M+K G  PD  +YN L+HG C  G ++EAL
Sbjct: 6   FWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEAL 65

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           +  +   + G  PD +TY+ L  GF    ++  A +++Q+++ +   PD+VTY  L+ G 
Sbjct: 66  KIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGL 125

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR-IDEALGLLYEMEAVGLKPD 272
           C+ G V+E    R +++ +GF  NVI YS L+S +C+  R + EAL L   +   G +P+
Sbjct: 126 CKNGRVDEA---RMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPE 182

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           + TY+ILI GL K+D+V++A +L++ +    + P++  +   + GLC+   + +A +   
Sbjct: 183 VPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLK 242

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +    C+ DVV +N +I+G  K   + EA  L   +  K  SP+ ++FN+LI G C+ G
Sbjct: 243 DMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAG 302

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYC---EEGNIQRLLALLQEMETKAIGPTHV 449
           K   A      +   G++P+ VTY   ++  C   +EG I+  + L   M  K   P  V
Sbjct: 303 KWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVV 362

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY+ +I GL K  KL +A +LL  M   G  P+  TYN++I   C  + + +A +L   M
Sbjct: 363 TYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAM 422

Query: 510 WLHNLEPTSATYNILI 525
                 P + TY  +I
Sbjct: 423 VEKGCVPDTITYGTII 438



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 228/429 (53%), Gaps = 7/429 (1%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M +HG  P+ ITY+ L  G     ++S A  + ++++  G  PD+VTY  L+ G+C++G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           ++E LK+ +  + +GF  +V+ Y+ L++  CK+ ++DEA  +L  M +  L PD+VTY+ 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC-EKEMITEARMYFDSLIMS 337
           L+ GLCK  +V +A  L   +  K  SPN   +  ++ GLC E   ++EA   F S++  
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
               +V  YNI+IDG +K   + EA +L+  L++  + P  +T+   I G CK G+V DA
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             +L  +   G  P  V++   +N  C+E  +     LL  ME K   P  +++  +I G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD---LRKAFQLLNQMWLHNL 514
            C+  K ++A+   ++M   GV P  +TYN ++   CK +    +++A  L + M     
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P   TY+ LIDGL   G L +A  LL +++          Y ++I   C    V +A+ 
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417

Query: 575 FFCQMVEKG 583
            F  MVEKG
Sbjct: 418 LFVAMVEKG 426



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 229/435 (52%), Gaps = 7/435 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T + ++ GLC   R+ DA    +      + P VV+ N ++  +CK+G  + A  +F
Sbjct: 9   NRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIF 68

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              +K G  PD  +YN LI+G C A  ++EA      M    + PD +TY+ L  G    
Sbjct: 69  DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKN 128

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC-QIGNVEEGLKLREVMLSQGFKLNVIA 240
            ++  A  +I   + KG  P+++TY+ LI G C ++  V E LKL   +L QG++  V  
Sbjct: 129 GRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPT 185

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y++L+  + K  R++EA  L   +   GL+PD +TY++ I GLCK  +V  A+ +  +M 
Sbjct: 186 YNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 245

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K   P+  +H A++ GLC+++ + EA +    +    C  + + +N +I G  + G   
Sbjct: 246 EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWK 305

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCK---NGKVADARRLLDTIKLHGLEPSAVTYT 417
           +A+  +++++++ + P++VT+N L+ G CK    G++ +A  L D +   G  P  VTY+
Sbjct: 306 KAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYS 365

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++   + G +     LL  ME K   P   TY  +I GLC   K+ EA++L   M   
Sbjct: 366 ALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEK 425

Query: 478 GVTPDQITYNTIIRS 492
           G  PD ITY TII +
Sbjct: 426 GCVPDTITYGTIISA 440



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 142/431 (32%), Positives = 229/431 (53%), Gaps = 12/431 (2%)

Query: 33  TYNSLLYNLRHTDIMWD---LYDD-IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
           TYN+LL  L +   M D   LY+  IK   +P +V T + ++ G C+   L +A+     
Sbjct: 12  TYNALLSGLCNGGRMSDAQALYERMIKAGYSP-DVVTYNTLLHGFCKVGELDEALKIFDG 70

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
              + F P VV+ NA+++ +CK    + A+ +   M+   L PD  +YN L++GLC  G 
Sbjct: 71  AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGR 130

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGF-HLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           ++EA     D    G  P+ ITYS L  G    L  +S A K+   +L +G +P++ TY 
Sbjct: 131 VDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYN 187

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +LI G  +   V E  +L   ++  G + + I Y+V +  +CK+GR+++AL +L +M+  
Sbjct: 188 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 247

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  PD+V+++ +I GLCK+ +V +A  L + M +K  SPN+ +   ++ G C      +A
Sbjct: 248 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 307

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKL---GNIGEAVQLYRQLIEKRISPSIVTFNSL 384
              F  ++       VV YNI++DG  K    G I EA+ L+  +IEK   P +VT+++L
Sbjct: 308 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSAL 367

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G  K GK+ DARRLL  ++  G  P+  TY + ++  C    +   L L   M  K  
Sbjct: 368 IDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGC 427

Query: 445 GPTHVTYTVVI 455
            P  +TY  +I
Sbjct: 428 VPDTITYGTII 438



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 210/389 (53%), Gaps = 14/389 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIK--VSET--PR 61
           + + G + +A+ +     +      + TYN+L+      D + +    ++  VSE   P 
Sbjct: 55  FCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPD 114

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK--LGFAEVAKG 119
            V  NS+V +GLC+  R+ +A + + +   K F P+V++ + ++S  C+   G +E  K 
Sbjct: 115 VVTYNSLV-NGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALK- 169

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  +LK G  P+  +YNILI GL     + EA E  + + +HG+EPDAITY++   G  
Sbjct: 170 LFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC 229

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A  +++ +  KG  PD+V++  +I G C+   V+E   L   M ++G   N I
Sbjct: 230 KAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAI 289

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK---QDKVHKAIQLY 296
           +++ L+   C++G+  +A+    EM   G+KP +VTY+IL+ GLCK   + ++ +AI L+
Sbjct: 290 SFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLF 349

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           + M  K   P+   + A++ GL +   + +AR    ++    CI +V  YN +I G   L
Sbjct: 350 DAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGL 409

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
             + EA++L+  ++EK   P  +T+ ++I
Sbjct: 410 EKVDEALELFVAMVEKGCVPDTITYGTII 438



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 6/96 (6%)

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M  H   P   TYN L+ GLC  G + +A  L   + +   S   V Y T++   C  G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
           + +A+  F   V++GF   +  Y        L NGF
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYN------ALINGF 90


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 141/481 (29%), Positives = 252/481 (52%), Gaps = 16/481 (3%)

Query: 159 MGRHGVEP-DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           MGR G  P +A +Y+++  G     +   A +V  ++  +   P+ +TY  +I G+ + G
Sbjct: 5   MGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGG 64

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
           ++E G +LR+ M+  G K N I Y+VLLS +C++GR+ E   LL EM +  + PD  TYS
Sbjct: 65  DLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYS 124

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           IL  GL +       + L+ +     ++   +    +L GLC+   ++ A     SL+ +
Sbjct: 125 ILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA 184

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
             +   V+YN +I+GY + G +  A   + Q+  + I P  +T+N+LI G CK  ++ +A
Sbjct: 185 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 244

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
           + LL  ++ +G+ P+  T+ T ++AY   G +++   +L EM+   + P  V+Y  ++  
Sbjct: 245 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 304

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
            CK  K+ EAV +L+DM+   V P+   YN II ++ +     +AF L+ +M  + + P+
Sbjct: 305 FCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 364

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             TYN+LI GLC    +  A+ ++ SL  H +    V+Y T+I A C  G++ KA+    
Sbjct: 365 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 424

Query: 578 QMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           +M + G + ++R Y +                 +  M+ N   P   I  +M+ A+ + G
Sbjct: 425 RMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 484

Query: 623 D 623
           +
Sbjct: 485 N 485



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 252/487 (51%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+  S N +++   + G    A  +F  M +  + P+  +YN +I G    G +E     
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + M  HG++P+AITY++L  G     ++     ++ ++  +   PD  TY++L  G  +
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G+ +  L L    L  G  +     S+LL+ +CK G++  A  +L  +   GL P  V 
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G C+  ++  A   + +M S+ I P+   + A++ GLC+ E IT A+     + 
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            +     V  +N +ID Y + G + +   +  ++ E  + P++V++ S++  FCKNGK+ 
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  +LD +    + P+A  Y   ++AY E G   +   L+++M++  I P+ VTY ++I
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           KGLC Q ++ EA +++  +    + PD ++YNT+I + C   ++ KA  L  +M  + ++
Sbjct: 373 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 432

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
            T  TY+ LI GL   G L   + L   + ++N+  +   +  +++A+   G+  KA   
Sbjct: 433 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDL 492

Query: 576 FCQMVEK 582
             +M++K
Sbjct: 493 RKEMLQK 499



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 234/485 (48%), Gaps = 35/485 (7%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N ++ ++VI G+ +  R  DA+    E   +   P+ ++ N ++  + K G  E    
Sbjct: 12  PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR 71

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M+ +GL P+A +YN+L+ GLC AG M E     ++M    + PD  TYSIL  G  
Sbjct: 72  LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 131

Query: 180 -------LLS----------------------------QISGAWKVIQKLLIKGSDPDIV 204
                  +LS                            ++S A +V+Q L+  G  P  V
Sbjct: 132 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 191

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            Y  LI GYCQ G +E        M S+  K + I Y+ L++ +CK+ RI  A  LL EM
Sbjct: 192 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 251

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           +  G+ P + T++ LI    +  ++ K   + +EM    + PN  ++G+I+   C+   I
Sbjct: 252 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 311

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            EA    D +   + + +  +YN +ID YV+ G   +A  L  ++    ISPSIVT+N L
Sbjct: 312 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 371

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G C   ++++A  +++++  H L P AV+Y T ++A C  GNI + L L Q M    I
Sbjct: 372 IKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 431

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
             T  TY  +I GL    +L E   L + M    V P    +N ++ ++ K  +  KA  
Sbjct: 432 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 491

Query: 505 LLNQM 509
           L  +M
Sbjct: 492 LRKEM 496



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 218/473 (46%), Gaps = 38/473 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL-YNLRHTDIM--WDLYDDIKVSETPRNVY 64
           R G   DAV V  +M E  +  +  TYN+++  +++  D+   + L D +       N  
Sbjct: 27  RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAI 86

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGP-------------------SVVSL---- 101
           T ++++ GLC+  R+ +    L E A ++  P                   +++SL    
Sbjct: 87  TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 146

Query: 102 ------------NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                       + +++  CK G   +A+ +   ++  GL P    YN LI+G C  G +
Sbjct: 147 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 206

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           E A      M    ++PD ITY+ L  G     +I+ A  ++ ++   G +P + T+  L
Sbjct: 207 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 266

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I  Y + G +E+   +   M   G K NV++Y  ++++ CK+G+I EA+ +L +M    +
Sbjct: 267 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 326

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P+   Y+ +I    +     +A  L  +M S  ISP+   +  ++ GLC +  I+EA  
Sbjct: 327 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 386

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             +SL     I D V YN +I      GNI +A+ L +++ +  I  ++ T++ LI G  
Sbjct: 387 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLG 446

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
             G++ +   L   +  + + PS   +   + AY + GN  +   L +EM  K
Sbjct: 447 GAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 171/345 (49%), Gaps = 35/345 (10%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           YT SI+++GLC+  ++  A   LQ        P+ V  N +++ YC+ G  E A   F  
Sbjct: 156 YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 215

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M    + PD  +YN LI+GLC A  +  A +   +M  +GV P   T++ L   +    Q
Sbjct: 216 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 275

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +   + V+ ++   G  P++V+Y  ++  +C+ G + E + + + M  +    N   Y+ 
Sbjct: 276 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 335

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ +  + G  D+A  L+ +M++ G+ P +VTY++LI+GLC Q ++ +A ++ N + + R
Sbjct: 336 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 395

Query: 304 ISPNSFAHGAILLGLCEKEMITEA-----RMY---------------------------- 330
           + P++ ++  ++   C +  I +A     RM+                            
Sbjct: 396 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 455

Query: 331 --FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
             +  ++ +N +    ++NIM++ Y K GN  +A  L +++++KR
Sbjct: 456 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 500



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 140/302 (46%), Gaps = 5/302 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y +TG +  A     +MK   +K    TYN+L+  L    R T+   DL  +++ +    
Sbjct: 200 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN-AQDLLMEMQDNGVNP 258

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V T + +ID   +  +L+   + L E       P+VVS  +I++ +CK G    A  + 
Sbjct: 259 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 318

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M    + P+A  YN +I      G  ++A      M  +G+ P  +TY++L KG    
Sbjct: 319 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 378

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           SQIS A ++I  L      PD V+Y  LI   C  GN+++ L L++ M   G K  V  Y
Sbjct: 379 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 438

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
             L+S +  +GR++E   L  +M    + P    ++I++    K     KA  L  EM  
Sbjct: 439 HQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 498

Query: 302 KR 303
           KR
Sbjct: 499 KR 500



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 130/282 (46%), Gaps = 15/282 (5%)

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+  ++N +I G  + G+  DA  + D +    + P+ +TY T ++ + + G+++    L
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
             +M    + P  +TY V++ GLC+  ++ E   LL++M    + PD  TY+ +     +
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
             D +    L  +   + +     T +IL++GLC +G +  A+ +L SL    +  T+V 
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMML 600
           Y T+I  +C  G++  A + F QM  +  +     Y                +     M 
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            NG  P  E    ++ A+ + G L   F + + M ++GL P+
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 294



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 19/222 (8%)

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
           A  P   +Y VVI G+ +  +  +AV++ ++M    V P+ ITYNT+I    K  DL   
Sbjct: 10  APPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 69

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
           F+L +QM  H L+P + TYN+L+ GLC  G +     LL  +    +      Y+ +   
Sbjct: 70  FRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 129

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC-----------------MMLSNGFP 605
               GD    ++ F + ++ G  ++I DYT S                     +++ G  
Sbjct: 130 LSRNGDSKAMLSLFGKYLKNG--VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 187

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           P + I   ++  + Q G+L   F     M    + PD    N
Sbjct: 188 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 229


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 161/559 (28%), Positives = 273/559 (48%), Gaps = 15/559 (2%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +L DA+    E       PS+V  N ++S   K+   ++   L   M    +  D +SYN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           ILI+  C    +  AL     M + G EPD +T S L  G+    +IS A  ++ ++ + 
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
              P+ VT+  LI G        E + L + M+++G + ++  Y  +++ +CK G ID A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L LL +ME   ++ D+V Y+ +I  LC    V+ A+ L+ EM +K I PN   + +++  
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC     ++A      +I      +VV ++ +ID +VK G + EA +LY ++I++ I P 
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 343

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           I T++SLI GFC + ++ +A+ + + +      P+ VTY T +  +C+   ++  + L +
Sbjct: 344 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 403

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM  + +    VTY  +I+GL +      A ++ + M   GV PD ITY+ ++   CK  
Sbjct: 404 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 463

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            L KA  +   +    +EP   TYNI+I+G+C  G +++   L  SL    +    + YT
Sbjct: 464 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 523

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG-----------FEISIRDYTKS----FFCMMLSN 602
           T+I   C +G   +A   F +M E G               +RD  K+        M S 
Sbjct: 524 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 583

Query: 603 GFPPDQEICEVMLIAFHQG 621
           GF  D     +++   H G
Sbjct: 584 GFVGDASTISMVINMLHDG 602



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 148/549 (26%), Positives = 268/549 (48%), Gaps = 58/549 (10%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
            IAKM + DL +S+      + NLR   I +DLY             + +I+I+  C++S
Sbjct: 73  AIAKMNKFDLVISL---GERMQNLR---ISYDLY-------------SYNILINCFCRRS 113

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +L  A+  L +     + P +V+L+++++ YC       A  L   M      P+  ++N
Sbjct: 114 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 173

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
            LIHGL +     EA+   + M   G +PD  TY  +  G      I  A  +++K+   
Sbjct: 174 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 233

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
             + D+V YT +I   C   NV + L L   M ++G + NV+ Y+ L+  +C  GR  +A
Sbjct: 234 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 293

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             LL +M    + P++VT+S LI    K+ K+ +A +LY+EM  + I P+ F + +++ G
Sbjct: 294 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 353

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
            C  + + EA+  F+ +I  +C  +VV YN +I G+ K   + E ++L+R++ ++ +  +
Sbjct: 354 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 413

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            VT+N+LI G  + G    A+++   +   G+ P  +TY+  ++  C+ G +++ L + +
Sbjct: 414 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 473

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQ------WKL--------------------------- 464
            ++   + P   TY ++I+G+CK       W L                           
Sbjct: 474 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 533

Query: 465 --QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM----WLHNLEPTS 518
             +EA  L  +M   G  P+  TYNT+IR+  +  D   + +L+ +M    ++ +    S
Sbjct: 534 LKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 593

Query: 519 ATYNILIDG 527
              N+L DG
Sbjct: 594 MVINMLHDG 602



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 163/308 (52%), Gaps = 5/308 (1%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNS 67
           V+DA+ +  +M    ++ ++ TYNSL+  L    R +D    L D I+    P NV T S
Sbjct: 255 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP-NVVTFS 313

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
            +ID   ++ +L +A     E   +   P + + +++++ +C     + AK +F LM+  
Sbjct: 314 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 373

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
              P+  +YN LI G C A  +EE +E   +M + G+  + +TY+ L +G         A
Sbjct: 374 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 433

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            K+ +K++  G  PDI+TY++L+ G C+ G +E+ L + E +     + ++  Y++++  
Sbjct: 434 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 493

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           MCK+G++++   L   +   G+KP+++ Y+ +I G C++    +A  L+ EM      PN
Sbjct: 494 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 553

Query: 308 SFAHGAIL 315
           S  +  ++
Sbjct: 554 SGTYNTLI 561


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 262/490 (53%), Gaps = 19/490 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC----------I 145
           P+   LN I   +C   ++  +       L   LH    S+N L+H             I
Sbjct: 19  PNFQFLNPIFLIHCFTSYSSFSNST---TLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKI 75

Query: 146 AGSMEEALEFT------NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
            GS+ +A  ++        M  +G+  + +T SIL   F  L   S ++ V   +L KG 
Sbjct: 76  LGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGY 135

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
           +PD +T T LI G C  G++ + L   + +L+ GF+LN ++Y  L++ +CK G+   AL 
Sbjct: 136 EPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALE 195

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           +L  ++   ++ D+V Y+ +I G+CK   V+ A   Y+EM +KRI P    +  ++ GLC
Sbjct: 196 MLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLC 255

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
               + +A      +I+ N    V  ++I++D + K G + EA  ++  +++K + P+IV
Sbjct: 256 IMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIV 315

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T+NSL+ G+C   +V  A  + +T+   G+ P   +Y+  ++ +C+   +   + L +EM
Sbjct: 316 TYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEM 375

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
             K I P  VTY  +I GLCK  ++  A++L+ +M+  G  P+ ITYN+++ + CK   +
Sbjct: 376 HCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHV 435

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
            KA +LL ++  HN++P+  TYNILI+GLC +G LK+A  +   +  +  ++    Y T+
Sbjct: 436 DKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTM 495

Query: 560 IKAHCAEGDV 569
           IK  C +G V
Sbjct: 496 IKGFCKKGFV 505



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 209/401 (52%)

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           +++   G   ++VT ++LI  + Q+G+      +   +L +G++ + I  + L+  +C  
Sbjct: 93  RQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLK 152

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G I +AL    ++ A+G + + V+Y  LI GLCK  +   A+++   +  K +  +   +
Sbjct: 153 GDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMY 212

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             I+ G+C+ +++ +A  ++  ++       VV YN +I G   +G + +A+ L  ++I 
Sbjct: 213 NTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMIL 272

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           + I+P++ TF+ L+  FCK GKV +A+ +   +    ++P+ VTY + MN YC    + +
Sbjct: 273 ENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNK 332

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
             ++   M    + P   +Y+++I G CK   + EA++L E+M+   + PD +TYN++I 
Sbjct: 333 AESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLID 392

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
             CK   +  A +L+ +M      P   TYN L+D LC N  +  A  LL  L++HNI  
Sbjct: 393 GLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQP 452

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +   Y  +I   C  G +  A   F  ++  G+ I +  Y 
Sbjct: 453 SVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYN 493



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 206/420 (49%)

Query: 42  RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSL 101
            H  I+  L+  ++ +    N+ T SI+I+   Q      +         K + P  ++L
Sbjct: 83  NHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITL 142

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
             ++   C  G    A      +L  G   +  SY  LI+GLC  G  + ALE    +  
Sbjct: 143 TTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDG 202

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
             V  D + Y+ +  G      ++ A+    +++ K   P +VTY  LICG C +G +++
Sbjct: 203 KLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKD 262

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            + L   M+ +     V  +S+L+ + CK G++ EA  +   M    +KP++VTY+ L+ 
Sbjct: 263 AIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMN 322

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           G C  ++V+KA  ++N M    ++P+  ++  ++ G C+ +M+ EA   F+ +       
Sbjct: 323 GYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFP 382

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           DVV YN +IDG  K G I  A++L  ++ ++   P+I+T+NSL+   CKN  V  A  LL
Sbjct: 383 DVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELL 442

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +K H ++PS  TY   +N  C+ G ++    + +++          TY  +IKG CK+
Sbjct: 443 TKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKK 502



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 210/425 (49%), Gaps = 3/425 (0%)

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLL-IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +YS  +    L SQ+         LL  K   P I+ +  ++    +  +    + L   
Sbjct: 35  SYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQ 94

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   G   N++  S+L++   + G    +  +   +   G +PD +T + LI+GLC +  
Sbjct: 95  MEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGD 154

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYN 347
           +HKA+  ++++ +     N  ++  ++ GLC K   T+A +     I    ++ DVV+YN
Sbjct: 155 IHKALHFHDKVLALGFQLNQVSYRTLINGLC-KVGQTKAALEMLRRIDGKLVRLDVVMYN 213

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +IDG  K   + +A   Y +++ KRI P++VT+N+LI G C  G++ DA  LL  + L 
Sbjct: 214 TIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILE 273

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
            + P+  T++  ++A+C+EG ++    +   M  K + P  VTY  ++ G C   ++ +A
Sbjct: 274 NINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKA 333

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
             +   M  IGV PD  +Y+ +I  FCK K + +A +L  +M    + P   TYN LIDG
Sbjct: 334 ESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDG 393

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC +G +  A  L+  + +       + Y +++ A C    V KA+    ++ +   + S
Sbjct: 394 LCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPS 453

Query: 588 IRDYT 592
           +  Y 
Sbjct: 454 VCTYN 458



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 187/351 (53%), Gaps = 3/351 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G +H A+    K+  L  +++  +Y +L+  L     T    ++   I       +V   
Sbjct: 153 GDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMY 212

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +IDG+C+   + DA  F  E   K   P+VV+ N ++   C +G  + A GL   M+ 
Sbjct: 213 NTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMIL 272

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             ++P  ++++IL+   C  G ++EA      M +  V+P+ +TY+ L  G+ L+++++ 
Sbjct: 273 ENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNK 332

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  +   +   G  PD+ +Y+++I G+C+I  V+E +KL E M  +    +V+ Y+ L+ 
Sbjct: 333 AESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLID 392

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CKSGRI  AL L+ EM   G  P+++TY+ L+  LCK   V KAI+L  ++    I P
Sbjct: 393 GLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQP 452

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +   +  ++ GLC+   + +A+  F+ ++++    DV  YN MI G+ K G
Sbjct: 453 SVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 165/326 (50%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+GLC+  + + A+  L+   GK     VV  N I+   CK      A   +  M+   
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + P   +YN LI GLCI G +++A+   + M    + P   T+SIL   F    ++  A 
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAK 299

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            V   ++ K   P+IVTY  L+ GYC +  V +   +   M   G   +V +YS+++S  
Sbjct: 300 NVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGF 359

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK   +DEA+ L  EM    + PD+VTY+ LI GLCK  ++  A++L  EM  +   PN 
Sbjct: 360 CKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNI 419

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             + ++L  LC+   + +A      L   N    V  YNI+I+G  K G + +A +++  
Sbjct: 420 ITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFED 479

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKV 394
           ++    +  + T+N++I GFCK G V
Sbjct: 480 VLVNGYNIDVYTYNTMIKGFCKKGFV 505



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 154/277 (55%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           +D Y ++        V T + +I GLC   +L+DAI  L +   +   P+V + + ++  
Sbjct: 229 FDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDA 288

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           +CK G  + AK +F +M+K  + P+  +YN L++G C+   + +A    N M + GV PD
Sbjct: 289 FCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPD 348

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
             +YSI+  GF  +  +  A K+ +++  K   PD+VTY  LI G C+ G +   LKL  
Sbjct: 349 VHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIG 408

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M  +G   N+I Y+ LL ++CK+  +D+A+ LL +++   ++P + TY+ILI GLCK  
Sbjct: 409 EMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSG 468

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           ++  A +++ ++     + + + +  ++ G C+K  +
Sbjct: 469 RLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 3/222 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVS 57
           +L   + + G V +A  V   M + D+K +I TYNSL+     +   +    +++ +   
Sbjct: 284 ILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQI 343

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +V++ SI+I G C+   + +A+   +E   K+  P VV+ N+++   CK G    A
Sbjct: 344 GVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYA 403

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M   G  P+  +YN L+  LC    +++A+E    +  H ++P   TY+IL  G
Sbjct: 404 LKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILING 463

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
                ++  A KV + +L+ G + D+ TY  +I G+C+ G V
Sbjct: 464 LCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 175/611 (28%), Positives = 286/611 (46%), Gaps = 19/611 (3%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           ++ SE+   V  N +V+ G  +Q  L    L L E   +      V++N ++   C+ G 
Sbjct: 95  LRSSESVDTVSYN-VVMSGFSEQGGLAPEAL-LAEMCKRGVPFDAVTVNTVLVGLCRDGR 152

Query: 114 AEVAKGLFCLMLKYGL--HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
            + A  L  +M++ G     D   +N L+ G C  G ME A      M   GV  D + Y
Sbjct: 153 VDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGY 212

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + L  G     ++  A  ++  +   G +P++VTYT+ I  YC+   V++   L E M+ 
Sbjct: 213 NSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVR 272

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +G   +V+  S L+  +CK GR  EA  L  EME +G  P+ VTY +LI  L K  + ++
Sbjct: 273 KGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNE 332

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           ++ L  E+ S+ +  +   + A++  LC++  I EA+  F   +  N   + V Y ++ID
Sbjct: 333 SLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLID 392

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
              K GN+  A Q+  ++ EK ISP++VTF+S+I G  K G V  A   +  +K  G++P
Sbjct: 393 ALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDP 452

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + VTY T ++   +    +  L +  EM  + +         ++ GL K  K+++A  L 
Sbjct: 453 NVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALF 512

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            +M   GV  D + Y T+I    K  +L  AF++  ++   NL P +  YN+ I+ LC+ 
Sbjct: 513 REMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCML 572

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------- 583
           G  K A+  L  +Q   +   +V Y T+I A   EG   KA+     M            
Sbjct: 573 GKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITY 632

Query: 584 -------FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
                  FE    +  K     M S+GF P       +L A  QG     + E+   M+ 
Sbjct: 633 STLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMN 692

Query: 637 SGLLPDKFLIN 647
           +GL  D  + N
Sbjct: 693 AGLCADITVYN 703



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 190/689 (27%), Positives = 305/689 (44%), Gaps = 53/689 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G +  A  V  +MK   + V +  YNSL+  L      D   D+ D +K      N
Sbjct: 184 YCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPN 243

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T ++ I   C+++ + DA    +E   K   P VV+L+A++   CK G    A  LF 
Sbjct: 244 VVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFR 303

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K G  P+  +Y +LI  L  A    E+L    ++   GV  D I Y+ L        
Sbjct: 304 EMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEG 363

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +I  A  + +  L     P+ VTYTVLI   C+ GNV+   ++   M  +    NV+ +S
Sbjct: 364 KIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFS 423

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +++ + K G + +A   + EM+  G+ P++VTY  +I G  K      A+ +Y+EM  +
Sbjct: 424 SIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCE 483

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +  N F   +++ GL +   I +A   F  +     + D V Y  +IDG  K GN+  A
Sbjct: 484 GVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAA 543

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            ++ ++L EK + P  V +N  I   C  GK  +A   L+ ++  GL+P  VTY T + A
Sbjct: 544 FKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAA 603

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
              EG   + L LL  M+  +I P  +TY+ +I GL +   +++A  LL +M   G +P 
Sbjct: 604 QSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPT 663

Query: 483 QIT-----------------------------------YNTIIRSFCKCKDLRKAFQLLN 507
            +T                                   YNT++R  C     RKA  +L 
Sbjct: 664 SLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLE 723

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M    + P + T+N LI G   +G L NA      +  H IS     + T++    + G
Sbjct: 724 EMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAG 783

Query: 568 DVHKAMTFFCQMVEKGFEIS-------IRDYTKS--------FFCMMLSNGFPPDQEICE 612
            + ++     +M ++G E S       +  Y K          +C M+  GF P      
Sbjct: 784 RIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYN 843

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            ++  F + G +    EL   M   G+LP
Sbjct: 844 ALISDFSKVGMMSQAKELFNEMQNRGVLP 872



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 250/507 (49%), Gaps = 2/507 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T S +I+GL ++  +  A  +++E   +   P+VV+   ++    K    E A  ++
Sbjct: 418 NVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVY 477

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  G+  + F  + L++GL   G +E+A     +M   GV  D + Y+ L  G    
Sbjct: 478 HEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKT 537

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A+KV Q+L  K   PD V Y V I   C +G  +E     E M S G K + + Y
Sbjct: 538 GNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTY 597

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++++  + G+  +AL LL  M+   +KP+L+TYS LI GL +   V KA  L NEM S
Sbjct: 598 NTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSS 657

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-QDVVLYNIMIDGYVKLGNIG 360
              SP S  H  +L   C +   ++  +     +M+  +  D+ +YN ++      G   
Sbjct: 658 SGFSPTSLTHRRVLQA-CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTR 716

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A+ +  ++  + I+P  +TFN+LI G  K+G + +A    D +  HG+ P+  T+ T +
Sbjct: 717 KAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLL 776

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
                 G I     +L EM+ + I P+++TY +++ G  KQ    EAV+L  +M   G  
Sbjct: 777 GGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFL 836

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P   TYN +I  F K   + +A +L N+M    + PTS TY+IL+ G     +       
Sbjct: 837 PKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKF 896

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEG 567
           L  ++E   S +K   ++I +A    G
Sbjct: 897 LKDMKEKGFSPSKGTLSSISRAFSKPG 923



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 151/661 (22%), Positives = 276/661 (41%), Gaps = 75/661 (11%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           M    Y R   V DA  +  +M    +   + T ++L+  L    R ++      +  K+
Sbjct: 249 MFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKI 308

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
              P +V T  ++ID L +  R  +++  L E   +     ++   A+M   CK G  + 
Sbjct: 309 GAAPNHV-TYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDE 367

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           AK +F   L     P+  +Y +LI  LC AG+++ A +  ++M    + P+ +T+S +  
Sbjct: 368 AKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIIN 427

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G      +  A   ++++  +G DP++VTY  +I G  +    E  L +   ML +G ++
Sbjct: 428 GLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEV 487

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N      L++ + K+G+I++A  L  EM   G+  D V Y+ LI GL K   +  A ++ 
Sbjct: 488 NKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVG 547

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            E+  K + P++  +   +  LC      EA  + + +  +    D V YN MI    + 
Sbjct: 548 QELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSRE 607

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT- 415
           G   +A++L   +    I P+++T+++LI G  + G V  A+ LL+ +   G  P+++T 
Sbjct: 608 GKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTH 667

Query: 416 ----------------------------------YTTFMNAYCEEGNIQRLLALLQEMET 441
                                             Y T +   C  G  ++ + +L+EM  
Sbjct: 668 RRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSG 727

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           + I P  +T+  +I G  K   L  A    + M   G++P+  T+NT++        + +
Sbjct: 728 RGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGE 787

Query: 502 AFQLLNQMWLHNLEPTS-----------------------------------ATYNILID 526
           +  +LN+M    +EP++                                   +TYN LI 
Sbjct: 788 SDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALIS 847

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
                G +  A  L   +Q   +  T   Y  ++       +  +   F   M EKGF  
Sbjct: 848 DFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSP 907

Query: 587 S 587
           S
Sbjct: 908 S 908



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 239/507 (47%), Gaps = 5/507 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVY 64
           + G V  A   + +MKE  +  ++ TY +++   +     +   D+Y ++       N +
Sbjct: 431 KRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKF 490

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
               +++GL +  +++ A    +E   +      V+   ++    K G    A  +   +
Sbjct: 491 IVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQEL 550

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            +  L PDA  YN+ I+ LC+ G  +EA  F  +M   G++PD +TY+ +        + 
Sbjct: 551 TEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKT 610

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A K++  +      P+++TY+ LI G  + G VE+   L   M S GF    + +  +
Sbjct: 611 AKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRV 670

Query: 245 LSSMCKSGRIDEALGLLYE-MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L + C  GR  + +  ++E M   GL  D+  Y+ L+R LC      KA+ +  EM  + 
Sbjct: 671 LQA-CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRG 729

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I+P++    A++LG  +   +  A   +D ++      +V  +N ++ G    G IGE+ 
Sbjct: 730 IAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESD 789

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +  ++ ++ I PS +T++ L+ G+ K     +A RL   +   G  P   TY   ++ +
Sbjct: 790 MVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDF 849

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            + G + +   L  EM+ + + PT  TY +++ G  K     E  + L+DM   G +P +
Sbjct: 850 SKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSK 909

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMW 510
            T ++I R+F K     +A +LL  ++
Sbjct: 910 GTLSSISRAFSKPGMSWEARRLLKNLY 936



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 199/411 (48%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +IDGL +   L  A    QE   K   P  V  N  ++  C LG ++ A+     M  
Sbjct: 528 TTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQS 587

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL PD  +YN +I      G   +AL+  N M R  ++P+ ITYS L  G      +  
Sbjct: 588 TGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEK 647

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  ++ ++   G  P  +T+  ++    Q    +  L++ E M++ G   ++  Y+ L+ 
Sbjct: 648 AKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVR 707

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C +G   +A+ +L EM   G+ PD +T++ LI G  K   +  A   Y++M    ISP
Sbjct: 708 VLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISP 767

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N      +L GL     I E+ M  + +         + Y+I++ GY K  N  EAV+LY
Sbjct: 768 NVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLY 827

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            +++ K   P + T+N+LI  F K G ++ A+ L + ++  G+ P++ TY   ++ + + 
Sbjct: 828 CEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKL 887

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
            N   +   L++M+ K   P+  T + + +   K     EA +LL+++Y +
Sbjct: 888 RNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYKV 938


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 161/559 (28%), Positives = 273/559 (48%), Gaps = 15/559 (2%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +L DA+    E       PS+V  N ++S   K+   ++   L   M    +  D +SYN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           ILI+  C    +  AL     M + G EPD +T S L  G+    +IS A  ++ ++ + 
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
              P+ VT+  LI G        E + L + M+++G + ++  Y  +++ +CK G ID A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L LL +ME   ++ D+V Y+ +I  LC    V+ A+ L+ EM +K I PN   + +++  
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC     ++A      +I      +VV ++ +ID +VK G + EA +LY ++I++ I P 
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           I T++SLI GFC + ++ +A+ + + +      P+ VTY T +  +C+   ++  + L +
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM  + +    VTY  +I+GL +      A ++ + M   GV PD ITY+ ++   CK  
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            L KA  +   +    +EP   TYNI+I+G+C  G +++   L  SL    +    + YT
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG-----------FEISIRDYTKS----FFCMMLSN 602
           T+I   C +G   +A   F +M E G               +RD  K+        M S 
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599

Query: 603 GFPPDQEICEVMLIAFHQG 621
           GF  D     +++   H G
Sbjct: 600 GFVGDASTISMVINMLHDG 618



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 148/549 (26%), Positives = 268/549 (48%), Gaps = 58/549 (10%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
            IAKM + DL +S+      + NLR   I +DLY             + +I+I+  C++S
Sbjct: 89  AIAKMNKFDLVISL---GERMQNLR---ISYDLY-------------SYNILINCFCRRS 129

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +L  A+  L +     + P +V+L+++++ YC       A  L   M      P+  ++N
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
            LIHGL +     EA+   + M   G +PD  TY  +  G      I  A  +++K+   
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
             + D+V YT +I   C   NV + L L   M ++G + NV+ Y+ L+  +C  GR  +A
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             LL +M    + P++VT+S LI    K+ K+ +A +LY+EM  + I P+ F + +++ G
Sbjct: 310 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
            C  + + EA+  F+ +I  +C  +VV YN +I G+ K   + E ++L+R++ ++ +  +
Sbjct: 370 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            VT+N+LI G  + G    A+++   +   G+ P  +TY+  ++  C+ G +++ L + +
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQ------WKL--------------------------- 464
            ++   + P   TY ++I+G+CK       W L                           
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549

Query: 465 --QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM----WLHNLEPTS 518
             +EA  L  +M   G  P+  TYNT+IR+  +  D   + +L+ +M    ++ +    S
Sbjct: 550 LKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 609

Query: 519 ATYNILIDG 527
              N+L DG
Sbjct: 610 MVINMLHDG 618



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 163/308 (52%), Gaps = 5/308 (1%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNS 67
           V+DA+ +  +M    ++ ++ TYNSL+  L    R +D    L D I+    P NV T S
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP-NVVTFS 329

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
            +ID   ++ +L +A     E   +   P + + +++++ +C     + AK +F LM+  
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
              P+  +YN LI G C A  +EE +E   +M + G+  + +TY+ L +G         A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            K+ +K++  G  PDI+TY++L+ G C+ G +E+ L + E +     + ++  Y++++  
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           MCK+G++++   L   +   G+KP+++ Y+ +I G C++    +A  L+ EM      PN
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569

Query: 308 SFAHGAIL 315
           S  +  ++
Sbjct: 570 SGTYNTLI 577


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 174/589 (29%), Positives = 282/589 (47%), Gaps = 43/589 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN--------------LRHTDIMWDLY 51
           Y R   + DAV +  +M  + L++++   N+L+                +R  D  WDL 
Sbjct: 334 YCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVD--WDL- 390

Query: 52  DDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
                   P + Y+ S ++DG C++  +  AI    E        +VV+ N+++   C++
Sbjct: 391 -------EPES-YSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRV 442

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G  E A  ++ LMLK G+ PD  SY  L+  L   G    AL   ND+   G       +
Sbjct: 443 GAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAF 502

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + +  GF  + ++  A +   ++   G +PD VTY  LI GYC++GNVEE  K++E M  
Sbjct: 503 NTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEK 562

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +    ++  Y+ L+  + KS +  E + LL EM   GL P++VTY  LI G C + ++ K
Sbjct: 563 EAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDK 622

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A   Y +M  K  +PN      I+  L     I EA M          +Q +V  ++ +D
Sbjct: 623 AFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANML---------LQKMVNLDVFLD 673

Query: 352 -GYVKLGNIGEAVQLYRQLIEKRIS--------PSIVTFNSLIYGFCKNGKVADARRLLD 402
            GY    +  +   L  Q I   +         P+ V +N  I G CK+GKV DA+++  
Sbjct: 674 HGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFS 733

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
           ++ L G  P   TY T ++ Y   GN+    +L  EM  + + P  +TY  +I GLCK  
Sbjct: 734 SLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSG 793

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            L  A +L + +++ G+ P+ I+YN +I  +CK  + R+A  L N+M    + P+  TY+
Sbjct: 794 NLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYS 853

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
            LI G C  GD+  A  LL  ++E         +  +++ H   G+V K
Sbjct: 854 ALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKK 902



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 179/658 (27%), Positives = 299/658 (45%), Gaps = 48/658 (7%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           M+  +Y   GM+ +A+ V   M +L    S+++ N LL                      
Sbjct: 153 MILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLL---------------------- 190

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
                       L ++    +AIL           P V + + +++ YCK G+  VA   
Sbjct: 191 ----------SSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDF 240

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M   G   +  +YN LI G    G ME A      MG  G+  + +T ++L KG+  
Sbjct: 241 VKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCR 300

Query: 181 LSQISGAWKVIQKL-LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
             ++  A KV++++   +G   D   Y VLI GYC++  +++ ++LR+ ML+ G ++N+ 
Sbjct: 301 QCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLF 360

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
             + L++  CK+G++ EA  LL  M    L+P+  +YS L+ G C++  V KAI +YNEM
Sbjct: 361 ICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEM 420

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               I  N   H ++L GLC      +A   +  ++      D V Y  ++D   K+G  
Sbjct: 421 LRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEF 480

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A+ L+  ++ +    S   FN++I GFCK  K+ +A    + +K  G EP  VTY T 
Sbjct: 481 FRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTL 540

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ YC+ GN++    + ++ME +AI P+   Y  +I GL K  K +E + LL +M + G+
Sbjct: 541 IDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGL 600

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +P+ +TY T+I  +C    L KAF     M      P     + ++  L   G +  A+ 
Sbjct: 601 SPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANM 660

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK-------AMTFFCQMVEKGFEISIR--- 589
           LL  +   ++ L    +  + KA     D  K       +   F       + I+I    
Sbjct: 661 LLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLC 720

Query: 590 -----DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                D  K  F  +L  GF PD      ++  +   G++   F L   M+K GL P+
Sbjct: 721 KSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPN 778



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 254/510 (49%), Gaps = 9/510 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI------MWDLYDDIKVSET 59
           + R G+V  A+ V  +M  + ++ ++ T+NSLL  L           +W L   +K   T
Sbjct: 404 FCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLM--LKRGVT 461

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P  V +   ++D L +      A+    +   + +G S  + N +++ +CK+     A+ 
Sbjct: 462 PDEV-SYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEE 520

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
            F  M + G  PD  +Y  LI G C  G++EEA +    M +  + P    Y+ L  G  
Sbjct: 521 TFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLF 580

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +      ++ ++ +KG  P++VTY  LI G+C  G +++       M+ +GF  NVI
Sbjct: 581 KSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVI 640

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
             S ++SS+ + GRIDEA  LL +M  + +  D   +  L +         K     +E 
Sbjct: 641 ICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDES 700

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
                 PNS  +   + GLC+   + +A+  F SL++     D   Y  +I GY   GN+
Sbjct: 701 SKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNV 760

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A  L  +++++ ++P+I+T+N+LI G CK+G +  A++L D + L GL P+ ++Y   
Sbjct: 761 NDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNIL 820

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ YC+ GN +  L L  +M  + I P+ +TY+ +I G CKQ  + +A  LL++M  +  
Sbjct: 821 IDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFA 880

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
             +   +  ++    KC +++K  +L N M
Sbjct: 881 DQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 250/497 (50%), Gaps = 3/497 (0%)

Query: 93  EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           +F P+V  +  I+  YC+ G  + A  +F  M K G  P   S N L+  L   G    A
Sbjct: 145 KFSPTVFDM--ILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNA 202

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           +   + + R G+ PD  T SI+   +     ++ A   ++++   G + ++VTY  LI G
Sbjct: 203 ILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDG 262

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME-AVGLKP 271
              IG++E    + ++M  +G   N +  ++L+   C+  +++EA  +L EME + G+  
Sbjct: 263 CVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVL 322

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D   Y +LI G C+  K+  A++L +EM +  +  N F   A++ G C+   ++EA    
Sbjct: 323 DEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLL 382

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             ++  +   +   Y+ ++DG+ + G + +A+ +Y +++   I  ++VT NSL+ G C+ 
Sbjct: 383 MRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRV 442

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G   DA  +   +   G+ P  V+Y T ++   + G   R LAL  ++  +  G +   +
Sbjct: 443 GAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAF 502

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             +I G CK  K+ EA +    M  +G  PD +TY T+I  +CK  ++ +AF++  +M  
Sbjct: 503 NTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEK 562

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             + P+   YN LI GL  +   +    LL  +    +S   V Y T+I   C EG + K
Sbjct: 563 EAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDK 622

Query: 572 AMTFFCQMVEKGFEISI 588
           A T +  M+EKGF  ++
Sbjct: 623 AFTAYFDMIEKGFAPNV 639



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 189/407 (46%), Gaps = 33/407 (8%)

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
             F+ NV ++  L+  + ++   DE    L E+    + P    YS L+         ++
Sbjct: 88  SNFRPNVNSHCKLVHILSRARMYDETRSYLNEL----VTPSKNNYSSLVVW-------NE 136

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
            ++++ +    + SP  F    IL   CEK MI  A   FD++    C+  +   N ++ 
Sbjct: 137 LVRVFEDF---KFSPTVF--DMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLS 191

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
             V+ G    A+ +Y  +    I P + T + ++  +CK+G V  A   +  +   G E 
Sbjct: 192 SLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFEL 251

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + VTY + ++     G+++R   +L+ M  + I    VT T++IKG C+Q KL+EA ++L
Sbjct: 252 NVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVL 311

Query: 472 EDM-YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
            +M    G+  D+  Y  +I  +C+   +  A +L ++M    L       N LI+G C 
Sbjct: 312 REMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCK 371

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
           NG +  A+ LL+ + + ++     +Y+T++   C EG V KA++ + +M+  G + ++  
Sbjct: 372 NGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVT 431

Query: 591 YTK---------------SFFCMMLSNGFPPDQ-EICEVMLIAFHQG 621
           +                   + +ML  G  PD+   C ++ + F  G
Sbjct: 432 HNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMG 478



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/436 (22%), Positives = 195/436 (44%), Gaps = 16/436 (3%)

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
           V + + FK +   + ++L   C+ G I  AL +   M  +G  P L + + L+  L ++ 
Sbjct: 138 VRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKG 197

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +   AI +Y+ +    I P+ F    ++   C+   +  A  +   +       +VV YN
Sbjct: 198 ESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYN 257

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI-KL 406
            +IDG V +G++  A  + + + E+ I  + VT   LI G+C+  K+ +A ++L  + + 
Sbjct: 258 SLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERS 317

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+      Y   ++ YC    +   + L  EM    +         +I G CK  ++ E
Sbjct: 318 EGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSE 377

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A +LL  M    + P+  +Y+T++  FC+   + KA  + N+M    ++    T+N L+ 
Sbjct: 378 AERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLK 437

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           GLC  G  ++A  +   + +  ++  +V+Y T++      G+  +A+  +  ++ +G+  
Sbjct: 438 GLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGR 497

Query: 587 SIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           S   +                +  F  M   GF PD      ++  + + G++   F++ 
Sbjct: 498 STYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVK 557

Query: 632 AVMIKSGLLPDKFLIN 647
             M K  +LP   L N
Sbjct: 558 EKMEKEAILPSIELYN 573


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 167/628 (26%), Positives = 306/628 (48%), Gaps = 46/628 (7%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           V+ +M +L    ++ +YN LL  L          +++  + DD    + P +V + + VI
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD--GGDCPPDVVSYTTVI 206

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +G  ++  L  A     E   +   P+VV+ N+I++  CK    + A  +   M+K G+ 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  +YN ++HG C +G  +EA+ F   M   GVEPD +TY+ L        + + A K+
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              +  +G  P+I TY  L+ GY   G + E   L ++M+  G   N   +S+L+ +  K
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++D+A+ +  +M   GL PD VTY  +I  LCK  +V  A++ + +M  +R+SP +  
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + +++  LC  +   +A+     ++      D + +N +ID + K G + E+ +L+  ++
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
              + P+I+T+++LI G+C  GK+ +A +LL ++   G++P  VTY T +N YC+   ++
Sbjct: 507 RIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             L L +EME+  + P  +TY ++++GL +  +   A +L   +   G   +  TYN I+
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV-------- 542
              CK     +A ++   + L +L+  + T+NI+I  L   G    A  L          
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686

Query: 543 ---------------------------SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
                                      S++E+  +       +I++     GD+ +A T+
Sbjct: 687 PDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNG 603
              + EK F  S+   T S F  +LS G
Sbjct: 747 LFMIDEKHF--SLEASTASLFLDLLSGG 772



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 164/645 (25%), Positives = 283/645 (43%), Gaps = 53/645 (8%)

Query: 56  VSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
             E   N+ T  I+I   C   RL      L     K F    ++   ++   C      
Sbjct: 84  ADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 143

Query: 116 VAKGLFCL-MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE--PDAITYS 172
            A  +    M + G  P+ FSYNIL+ GLC     +EALE    M   G +  PD ++Y+
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            +  GF     +  A+    ++L +G  P++VTY  +I   C+   +++ +++   M+  
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKN 263

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   N   Y+ ++   C SG+  EA+G L +M + G++PD+VTY+ L+  LCK  +  +A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            ++++ M  + + P    +G +L G   K  + E     D ++ +    +  +++I+I  
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           Y K G + +A+ ++ ++ ++ ++P  VT+ ++I   CK+G+V DA R  + +    L P 
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443

Query: 413 AVTY-------------------------------TTFMNA----YCEEGNIQRLLALLQ 437
            + Y                               T F N+    +C+EG +     L  
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            M    + P  +TY+ +I G C   K+ EA +LL  M  +G+ PD +TYNT+I  +CK  
Sbjct: 504 LMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            +  A  L  +M    + P   TYNI++ GL        A  L V + E    L    Y 
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623

Query: 558 TIIKAHCAEGDVHKAMTFF-------CQMVEKGFEISI--------RDYTKSFFCMMLSN 602
            I+   C      +A+  F        Q+  + F I I         D  K  F  + +N
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           G  PD     +M     + G L  + +L   M ++G   +  ++N
Sbjct: 684 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 145/580 (25%), Positives = 269/580 (46%), Gaps = 22/580 (3%)

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG---LHPDAFSY 136
           +DA     E   +  G S+  LN  ++   +   A  A   +  M + G   + P+  +Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGADEVTPNLCTY 94

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
            ILI   C AG ++       ++ + G   DAI ++ L KG     + S A  ++ + + 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 197 K-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--NVIAYSVLLSSMCKSGR 253
           + G  P++ +Y +L+ G C     +E L+L ++M   G     +V++Y+ +++   K G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +D+A G  +EM   G+ P++VTY+ +I  LCK   + KA+++   M    + PN   + +
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           I+ G C      EA  +   +       DVV YN ++D   K G   EA +++  + ++ 
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           + P I T+ +L+ G+   G + +   LLD +  +G+ P+   ++  + AY ++G + + +
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            +  +M  + + P  VTY  VI  LCK  ++++A++  E M    ++P  I YN++I S 
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C      KA +L+ +M    +   +  +N +ID  C  G +  ++ L   +    +    
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNI 514

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTK--------SFFCM 598
           + Y+T+I  +C  G + +A      MV  G       +   I  Y K          F  
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
           M S+G  PD     ++L    Q     +  EL   + +SG
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 190/405 (46%), Gaps = 6/405 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y++ G V  A+ V +KM++  L     TY +++  L    R  D M      I  
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
             +P N+  NS+ I  LC   +   A   + E   +      +  N+I+  +CK G    
Sbjct: 439 RLSPGNIVYNSL-IHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           ++ LF LM++ G+ P+  +Y+ LI G C+AG M+EA +    M   G++PD +TY+ L  
Sbjct: 498 SEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+  +S++  A  + +++   G  PDI+TY +++ G  Q        +L   +   G +L
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +  Y+++L  +CK+   DEAL +   +    L+ +  T++I+I  L K  +  +A  L+
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             + +  + P+   +  +   L E+ ++ E    F S+  + C  +  + N ++   ++ 
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           G+I  A      + EK  S    T  SL       GK  +  R L
Sbjct: 738 GDITRAGTYLFMIDEKHFSLEAST-ASLFLDLLSGGKYQEYHRFL 781


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 262/517 (50%), Gaps = 7/517 (1%)

Query: 72  GLCQQSRLQDAILFL-QETAGKEFGPSVVSLNAIMSRYC---KLGFAEVAKGLFCLMLKY 127
           GL  +++  D +L L ++   K     + +LN +++ +C   KLGFA  A G    + K 
Sbjct: 98  GLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGK---IFKL 154

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  P+  ++N L++GLC+ G + EA+E  + M      PD IT + +  G  L  ++S A
Sbjct: 155 GYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEA 214

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             +I +++  G  P+  TY  ++   C+ GN    L L   M  +  K +V+ Y++++ +
Sbjct: 215 VDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDN 274

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK GR+D+AL    EME  G+K ++ TY+ LI   C   +     QL  +M +++I+PN
Sbjct: 275 LCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPN 334

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
                A++  L ++  +TEA+  ++ +I      + + YN +I G      + EA Q+  
Sbjct: 335 VVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMD 394

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            ++ K   P I T+N LI GFCK  +V D  RL   + L G+    VTY+T +  +C+  
Sbjct: 395 LMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSR 454

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            +     + QEM ++ + P  +TY +++ GLC   +L+EA+ +L+ M+   +  D   YN
Sbjct: 455 KLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYN 514

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            II   C    +  A+ L   +    ++    +YNI++ GLC    L  AD L   ++E 
Sbjct: 515 IIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKED 574

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
                   Y T+I+AH    D+  ++    +M   GF
Sbjct: 575 GYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGF 611



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 147/562 (26%), Positives = 265/562 (47%), Gaps = 20/562 (3%)

Query: 81  DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILI 140
           DA+   Q        P+V+  N +     +    ++   L   M   G+  D ++ NI+I
Sbjct: 73  DAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMI 132

Query: 141 HGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
           +  C    +  A      + + G EP+ +T++ L  G  L  ++  A +++  +++    
Sbjct: 133 NCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHV 192

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           PD++T   ++ G C    V E + L   M++ G + N   Y  +L+ MCKSG    AL L
Sbjct: 193 PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDL 252

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L +ME   +KP +VTY+I+I  LCK  ++  A+  ++EM +K I  N F + +++   C 
Sbjct: 253 LRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCS 312

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
                +       +I      +VV ++ +ID  VK G + EA  LY ++I + I P+ +T
Sbjct: 313 FGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTIT 372

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +NSLIYG C + ++ +A +++D +   G +P   TY   +N +C+   +   + L ++M 
Sbjct: 373 YNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMS 432

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            + +    VTY+ +I+G C+  KL  A ++ ++M   GV P  +TY  ++   C   +L 
Sbjct: 433 LRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELE 492

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +A  +L+QM    +E     YNI+I G+C    + +A  L  SL    +     +Y  ++
Sbjct: 493 EALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIML 552

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
              C    + +A   F +M E G+E                    PD      ++ A  +
Sbjct: 553 SGLCKRSSLSEADALFRKMKEDGYE--------------------PDGCTYNTLIRAHLR 592

Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
           G D+ +  +L   M + G   D
Sbjct: 593 GNDITTSVQLIEEMKRCGFSSD 614



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/573 (26%), Positives = 286/573 (49%), Gaps = 10/573 (1%)

Query: 8   RTGMVH----DAVFVIAKM---KELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           R+G+V     DAV +   M   + L   +       LL   +  D++  L   +++    
Sbjct: 63  RSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIA 122

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA-EVAKG 119
            ++YT +I+I+  C++ +L  A   + +     + P+ V+ N +++  C  G   E  + 
Sbjct: 123 YDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVEL 182

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           + C++L   + PD  + N +++GLC+   + EA++    M  +G +P+  TY  +     
Sbjct: 183 VDCMVLSQHV-PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMC 241

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
                + A  +++K+  +   P +VTYT++I   C+ G +++ L     M ++G K NV 
Sbjct: 242 KSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVF 301

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L+ S C  GR D+   LL +M    + P++VT+S LI  L K+ K+ +A  LYNEM
Sbjct: 302 TYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEM 361

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            ++ I PN+  + +++ GLC  + + EA    D ++   C  D+  YNI+I+G+ K   +
Sbjct: 362 ITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQV 421

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            + ++L+R++  + +    VT+++LI GFC++ K+  A+++   +   G+ P  +TY   
Sbjct: 422 DDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAIL 481

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C+ G ++  L +L +M    +      Y ++I G+C   K+ +A  L   +   GV
Sbjct: 482 LDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGV 541

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             D  +YN ++   CK   L +A  L  +M     EP   TYN LI       D+  +  
Sbjct: 542 KRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQ 601

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
           L+  ++    S +  +   I+    + G++ K+
Sbjct: 602 LIEEMKRCGFS-SDASTVKIVMDMLSSGELDKS 633



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/492 (24%), Positives = 242/492 (49%), Gaps = 4/492 (0%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVID 71
           A   + K+ +L  + +  T+N+LL  L     +++   L D + +S+   ++ T + +++
Sbjct: 144 AFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVN 203

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           GLC + R+ +A+  +         P+  +   I++R CK G    A  L   M    + P
Sbjct: 204 GLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKP 263

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
              +Y I+I  LC  G +++AL F ++M   G++ +  TY+ L   F    +     +++
Sbjct: 264 HVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLL 323

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           + ++ +   P++VT++ LI    + G + E   L   M+++G + N I Y+ L+  +C  
Sbjct: 324 RDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCND 383

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            R+DEA  ++  M + G  PD+ TY+ILI G CK  +V   ++L+ +M  + +  ++  +
Sbjct: 384 KRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTY 443

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++ G C+   +  A+  F  ++       ++ Y I++DG    G + EA+ +  Q+ +
Sbjct: 444 STLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHK 503

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
            ++   I  +N +I+G C   KV DA  L  ++   G++    +Y   ++  C+  ++  
Sbjct: 504 CKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSE 563

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
             AL ++M+     P   TY  +I+   +   +  +VQL+E+M   G + D  T   I+ 
Sbjct: 564 ADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVK-IVM 622

Query: 492 SFCKCKDLRKAF 503
                 +L K+F
Sbjct: 623 DMLSSGELDKSF 634



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 187/420 (44%), Gaps = 15/420 (3%)

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           ++ + L + ML       VI ++ L   + ++ + D  L L  +ME  G+  DL T +I+
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I   C++ K+  A     ++      PN+     +L GLC +  + EA    D +++S  
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           + D++  N +++G      + EAV L  +++     P+  T+  ++   CK+G  A A  
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           LL  ++   ++P  VTYT  ++  C++G +   L+   EMETK I     TY  +I   C
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFC 311

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
              +  +  QLL DM    +TP+ +T++ +I S  K   L +A  L N+M    +EP + 
Sbjct: 312 SFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTI 371

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYN LI GLC +  L  A+ ++  +           Y  +I   C    V   M  F +M
Sbjct: 372 TYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKM 431

Query: 580 VEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
             +G       Y+               K  F  M+S G  P      ++L      G+L
Sbjct: 432 SLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGEL 491


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 148/493 (30%), Positives = 251/493 (50%), Gaps = 6/493 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P + S N ++    K+        L+  M   GL PD F+ +IL + LC    + EAL  
Sbjct: 89  PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              + R G  P+ +TY+ L KG  +  +IS A ++  ++   G  P+ VTY  LI G CQ
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ 208

Query: 216 IGNVEEGLKLREVMLSQGF------KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
            GNV   LKL + ML+         K  VI YS+++  +CK GR DEA  L  EM+A G+
Sbjct: 209 TGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGM 268

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            PD+++YS LI G C   K  ++  L++EM  + + P+      ++  LC++  +TEA+ 
Sbjct: 269 IPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKK 328

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             + +I    + +++ YN +IDG+  +G++  A +L+  +  K + P  +++ +LI G+C
Sbjct: 329 LLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYC 388

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K  KV +A  L + +   G  P+  TY T +    ++G +     L   M+T  +     
Sbjct: 389 KTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQ 448

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            Y + + GLCK   L EA++L  ++       +   Y+ +I   CK   L  A++L  ++
Sbjct: 449 IYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKL 508

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               L+P   TYNI+I G C  G + NA+ L   ++E+  +   +AY T++   C    +
Sbjct: 509 SQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKL 568

Query: 570 HKAMTFFCQMVEK 582
            + +    +MV+K
Sbjct: 569 EEVIKLLHKMVQK 581



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 164/544 (30%), Positives = 262/544 (48%), Gaps = 28/544 (5%)

Query: 107 RYCKLG--FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           R CK G   A  A   F LM++    P   S+N L+ GL       +     N+M   G+
Sbjct: 63  RNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGL 122

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            PD  T SILA     ++++S A   +  +L +G  P++VTYT LI G C    + E  +
Sbjct: 123 SPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATR 182

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM------EAVGLKPDLVTYSI 278
           L   M   G   N + Y  L+  +C++G ++ AL L  EM        V  KP ++TYSI
Sbjct: 183 LFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSI 242

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           +I GLCK  +  +A +L+ EM ++ + P+  ++  ++ G C      +++  FD ++   
Sbjct: 243 IIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQG 302

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              D+V ++++ID   K G + EA +L   +I++ I P+++T+NSLI GFC  G +  AR
Sbjct: 303 VQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAR 362

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            L  ++   GLEP  ++YTT +N YC+   ++  + L  EM      P   TY  ++KGL
Sbjct: 363 ELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGL 422

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
            ++ K+ +A +L   M   GV+ +   Y   +   CK   L +A +L N++  +N +   
Sbjct: 423 FQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNI 482

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
             Y+ LIDGLC  G L+ A  L   L +  +    V Y  +I   C  G V  A   F +
Sbjct: 483 ENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEK 542

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
           M E                    NG  PD      +L  F +G  L  V +L   M++  
Sbjct: 543 MEE--------------------NGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKD 582

Query: 639 LLPD 642
           + P+
Sbjct: 583 VSPN 586



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 156/550 (28%), Positives = 272/550 (49%), Gaps = 44/550 (8%)

Query: 31  IQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           I ++N LL  L    H   ++ LY++++++    +++T SI+ + LC  +R+ +A   L 
Sbjct: 91  ISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEA---LA 147

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
             AG                                +L+ G  P+  +Y  LI GLC+  
Sbjct: 148 AMAG--------------------------------ILRRGYIPNVVTYTTLIKGLCMEH 175

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD------P 201
            + EA      M + G  P+A+TY  L KG      ++ A K+ +++L   S       P
Sbjct: 176 RISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKP 235

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
            ++TY+++I G C++G  +E  +L E M +QG   +VI+YS L+   C +G+ D++  L 
Sbjct: 236 GVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLF 295

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            EM   G++PD+VT+S+LI  LCK+ KV +A +L   M  + I PN   + +++ G C  
Sbjct: 296 DEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMV 355

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             +  AR  F S+       D + Y  +I+GY K   + EA+ LY ++++   SP++ T+
Sbjct: 356 GDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTY 415

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
            +L+ G  + GKV DA++L   +K +G+  ++  Y  F++  C+   +   + L  E+++
Sbjct: 416 GTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKS 475

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
                    Y+ +I GLCK  KL+ A +L E +   G+ PD +TYN +I  FCK   +  
Sbjct: 476 YNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDN 535

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A  L  +M  +   P    YN L+ G C    L+    LL  + + ++S    + T ++ 
Sbjct: 536 ANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVD 595

Query: 562 AHCAEGDVHK 571
             C +    K
Sbjct: 596 MLCKDEKYKK 605



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/428 (32%), Positives = 240/428 (56%), Gaps = 7/428 (1%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE--TAGKEFG----PSVVSLNAIMSRY 108
           K+  TP N  T   +I GLCQ   +  A+   +E      ++G    P V++ + I+   
Sbjct: 189 KLGCTP-NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGL 247

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK+G  + AK LF  M   G+ PD  SY+ LIHG C AG  +++    ++M   GV+PD 
Sbjct: 248 CKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDM 307

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +T+S+L        +++ A K+++ ++ +G  P+++TY  LI G+C +G++    +L   
Sbjct: 308 VTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLS 367

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M S+G + + I+Y+ L++  CK+ ++ EA+ L  EM  VG  P++ TY  L++GL ++ K
Sbjct: 368 MPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGK 427

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V  A +L+  M +  +S NS  +G  L GLC+ + + EA   F+ L   N   ++  Y+ 
Sbjct: 428 VGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSC 487

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDG  K G +  A +L+ +L ++ + P +VT+N +I+GFCK G+V +A  L + ++ +G
Sbjct: 488 LIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENG 547

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
             P  + Y T +  +CE   ++ ++ LL +M  K + P   + T+V+  LCK  K ++ V
Sbjct: 548 CTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFV 607

Query: 469 QLLEDMYV 476
            LL    V
Sbjct: 608 DLLPKFPV 615



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 142/451 (31%), Positives = 231/451 (51%), Gaps = 6/451 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + +I GLC + R+ +A             P+ V+   ++   C+ G   +A  L 
Sbjct: 160 NVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLH 219

Query: 122 CLML----KYGLH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
             ML    +YG++  P   +Y+I+I GLC  G  +EA E   +M   G+ PD I+YS L 
Sbjct: 220 KEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLI 279

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            GF    +   +  +  +++ +G  PD+VT++VLI   C+ G V E  KL EVM+ +G  
Sbjct: 280 HGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIV 339

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            N+I Y+ L+   C  G ++ A  L   M + GL+PD ++Y+ LI G CK  KV +A+ L
Sbjct: 340 PNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNL 399

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           YNEM     SPN   +G +L GL +K  + +A+  F  +       +  +Y I +DG  K
Sbjct: 400 YNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCK 459

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
              + EA++L+ +L       +I  ++ LI G CK GK+  A  L + +   GL+P  VT
Sbjct: 460 NDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVT 519

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y   ++ +C+ G +     L ++ME     P  + Y  ++ G C+  KL+E ++LL  M 
Sbjct: 520 YNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMV 579

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              V+P+  +   ++   CK +  +K   LL
Sbjct: 580 QKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 610



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 207/426 (48%), Gaps = 44/426 (10%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDI--KVSETPRN---- 62
           + +A  +  +M++L    +  TY +L+  L  T   +I   L+ ++    S+   N    
Sbjct: 177 ISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPG 236

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T SI+IDGLC+  R  +A    +E   +   P V+S + ++  +C  G  + +K LF 
Sbjct: 237 VITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFD 296

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+  G+ PD  ++++LI  LC  G + EA +    M + G+ P+ ITY+ L  GF ++ 
Sbjct: 297 EMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVG 356

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            ++ A ++   +  KG +PD ++YT LI GYC+   V+E + L   ML  G   NV  Y 
Sbjct: 357 DLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYG 416

Query: 243 VLLSSMCKSGRID-----------------------------------EALGLLYEMEAV 267
            LL  + + G++                                    EA+ L  E+++ 
Sbjct: 417 TLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSY 476

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
             K ++  YS LI GLCK  K+  A +L+ ++  + + P+   +  ++ G C+   +  A
Sbjct: 477 NFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNA 536

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
            + F+ +  + C  D++ YN ++ G+ +   + E ++L  ++++K +SP+  +   ++  
Sbjct: 537 NILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDM 596

Query: 388 FCKNGK 393
            CK+ K
Sbjct: 597 LCKDEK 602



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 141/312 (45%), Gaps = 23/312 (7%)

Query: 355 KLGNIG--EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           K GNI   +A   +  ++     P I +FN L+ G  K    +    L + ++L GL P 
Sbjct: 66  KTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPD 125

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             T +   N  C    +   LA +  +  +   P  VTYT +IKGLC + ++ EA +L  
Sbjct: 126 LFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFL 185

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM------WLHNLEPTSATYNILID 526
            M  +G TP+ +TY T+I+  C+  ++  A +L  +M      +  N +P   TY+I+ID
Sbjct: 186 RMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIID 245

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           GLC  G    A  L   ++   +    ++Y+T+I   C  G   ++   F +MV++G + 
Sbjct: 246 GLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQP 305

Query: 587 SIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
            +  ++               K    +M+  G  P+      ++  F   GDL S  EL 
Sbjct: 306 DMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELF 365

Query: 632 AVMIKSGLLPDK 643
             M   GL PD+
Sbjct: 366 LSMPSKGLEPDE 377


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 156/551 (28%), Positives = 273/551 (49%), Gaps = 44/551 (7%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTN---SIVID 71
           AV   A   +  L++  +T NS +Y++R      ++++++ V+     + T     ++I 
Sbjct: 76  AVISHAPNSKPSLQLLKETINSGVYSIR------EVFNELGVARGVLGIKTYVLYDLLIR 129

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
             C+  R  DA        GK   P V + N ++S + K    E A  L+  M +  +  
Sbjct: 130 ACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKS 189

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
              ++NI+I+ LC  G +++A EF   M   G++P+                        
Sbjct: 190 SVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPN------------------------ 225

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
                      +VTY  +I GYC  G VE    + ++M  +G K +   Y   +S MCK 
Sbjct: 226 -----------VVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKE 274

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G+++EA G+L +M+ +GL+P  VTY+ LI G C +  +  A    ++M  + + P    +
Sbjct: 275 GKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTY 334

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++  L     + EA      +     + D V YNI+I+GY + GN+ +A  L+ ++I 
Sbjct: 335 NMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMIS 394

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K I P+ VT+ SLIY   K G++  A  L + I   G+ P  + +   ++ +C  GN+ R
Sbjct: 395 KGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDR 454

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
             A+L+EM+   + P  VT+  +++G C++ K++ A +L+E+M   G+ PD I+YNT+I 
Sbjct: 455 AFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLIS 514

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            + K  D++ AF++ ++M      PT  TYN LI GLC N +  +A+ LL  +    I+ 
Sbjct: 515 GYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITP 574

Query: 552 TKVAYTTIIKA 562
               Y ++I+ 
Sbjct: 575 NDNTYLSLIEG 585



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 219/424 (51%)

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           + Y +L +    L +   A++    +  KG  P +     ++  + +    E+   L   
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M     K +V+ ++++++ +CK G++ +A   +  MEA+G+KP++VTY+ +I G C + +
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V  A  +++ M  + + P+S+ +G+ + G+C++  + EA    + +         V YN 
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDGY   GN+  A     +++ + + P++ T+N LI+    + K+ +A  ++  +   G
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L P +VTY   +N YC  GN+++   L  EM +K I PT VTYT +I  L K+ ++++A 
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQAD 421

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            L E +   G+ PD I +N +I   C   ++ +AF +L +M    + P   T+N L+ G 
Sbjct: 422 DLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGR 481

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C  G ++ A  L+  ++   I    ++Y T+I  +   GD+  A     +M+  GF  ++
Sbjct: 482 CREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTL 541

Query: 589 RDYT 592
             Y 
Sbjct: 542 LTYN 545



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 219/448 (48%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           Y++LI   C     ++A E  + M   GV P     + +   F   ++   AW +  ++ 
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
                  +VT+ ++I   C+ G +++  +   +M + G K NV+ Y+ ++   C  GR++
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
            A  +   M+  G+KPD  TY   I G+CK+ K+ +A  +  +M    + P +  +  ++
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            G C K  +  A  Y D ++    +  V  YN++I        + EA  + +++ EK + 
Sbjct: 304 DGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLV 363

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P  VT+N LI G+C+ G V  A  L D +   G++P+ VTYT+ +    + G +++   L
Sbjct: 364 PDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDL 423

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
            +++  K I P  + +  +I G C    +  A  +L++M  + V PD++T+NT+++  C+
Sbjct: 424 FEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCR 483

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              +  A +L+ +M    ++P   +YN LI G    GD+K+A  +   +     + T + 
Sbjct: 484 EGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLT 543

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           Y  +I+  C   +   A     +M+ KG
Sbjct: 544 YNALIQGLCKNEEGDHAEQLLKEMISKG 571



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 209/453 (46%), Gaps = 50/453 (11%)

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           V Y +LI   C++   ++  +  ++M  +G   +V A + +LS   KS R ++A  L  E
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M  + +K  +VT++I+I  LCK+ K+ KA +    M +  I PN                
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPN---------------- 225

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
                              VV YN +I GY   G +  A  ++  +  + + P   T+ S
Sbjct: 226 -------------------VVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGS 266

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
            I G CK GK+ +A  +L+ +K  GL P+AVTY T ++ YC +GN++       +M  + 
Sbjct: 267 FISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREG 326

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           + PT  TY ++I  L    K+ EA  ++++M   G+ PD +TYN +I  +C+C +++KAF
Sbjct: 327 LMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAF 386

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L ++M    ++PT  TY  LI  L   G +K AD L   +    I    + +  +I  H
Sbjct: 387 TLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGH 446

Query: 564 CAEGDVHKAMTFFCQMVEKGF---EISIR------------DYTKSFFCMMLSNGFPPDQ 608
           CA G++ +A     +M +      E++              +  +     M S G  PD 
Sbjct: 447 CANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDH 506

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                ++  + + GD+   F +   M+  G  P
Sbjct: 507 ISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNP 539



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 165/344 (47%), Gaps = 15/344 (4%)

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           CE +   +A   FD +     I  V   N M+  ++K     +A  LY ++   RI  S+
Sbjct: 132 CELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSV 191

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VTFN +I   CK GK+  A+  +  ++  G++P+ VTY T ++ YC  G ++    +   
Sbjct: 192 VTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDL 251

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M+ + + P   TY   I G+CK+ KL+EA  +LE M  IG+ P  +TYNT+I  +C   +
Sbjct: 252 MKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGN 311

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L  AF   ++M    L PT +TYN+LI  L ++  +  AD ++  + E  +    V Y  
Sbjct: 312 LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNI 371

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNG 603
           +I  +C  G+V KA T   +M+ KG + +   YT                  F  ++  G
Sbjct: 372 LINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKG 431

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             PD  +   ++      G++   F +   M +  ++PD+   N
Sbjct: 432 IFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFN 475



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 167/314 (53%), Gaps = 3/314 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           + G + +A  ++ KMKE+ L+ +  TYN+L+    N  + ++ +D  D +        V 
Sbjct: 273 KEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVS 332

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +++I  L    ++ +A   ++E + K   P  V+ N +++ YC+ G  + A  L   M
Sbjct: 333 TYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEM 392

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G+ P   +Y  LI+ L   G M++A +    + R G+ PD I ++ L  G      +
Sbjct: 393 ISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNM 452

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A+ +++++      PD VT+  L+ G C+ G VE   +L E M S+G K + I+Y+ L
Sbjct: 453 DRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTL 512

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +S   K G + +A  +  EM ++G  P L+TY+ LI+GLCK ++   A QL  EM SK I
Sbjct: 513 ISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGI 572

Query: 305 SPNSFAHGAILLGL 318
           +PN   + +++ G+
Sbjct: 573 TPNDNTYLSLIEGI 586



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 6/218 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRN 62
           Y R G V  A  +  +M    ++ +  TY SL+Y L     M    DL++ I       +
Sbjct: 376 YCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPD 435

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           +   + +IDG C    +  A   L+E    +  P  V+ N +M   C+ G  E A+ L  
Sbjct: 436 LIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIE 495

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G+ PD  SYN LI G    G M++A    ++M   G  P  +TY+ L +G     
Sbjct: 496 EMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNE 555

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
           +   A +++++++ KG  P+  TY  LI G   IGNVE
Sbjct: 556 EGDHAEQLLKEMISKGITPNDNTYLSLIEG---IGNVE 590


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 150/502 (29%), Positives = 259/502 (51%), Gaps = 38/502 (7%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVS 57
           +L   Y      ++A+     +KE     +I+T N   SL   L  T + W LY ++   
Sbjct: 151 LLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRM 210

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               ++YT +I+I+ LC++ +L+ A         KEF                +G  E  
Sbjct: 211 NIRSSLYTFNIMINVLCKEGKLKKA---------KEF----------------IGHMET- 244

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
                     G+ P+  +YN +IHG C+ G  + A      M   G+EPD  TY+    G
Sbjct: 245 ---------LGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISG 295

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A  +I K+L  G  P+ VTY  LI GYC  G++++    R+ M+S+G   +
Sbjct: 296 LCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMAS 355

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           ++ Y++ + ++   GR+ +A  ++ EM   G+ PD VT++ILI G C+     +A  L +
Sbjct: 356 LVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLD 415

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  K I P    + +++  L ++  + EA   F  +     + D++++N +IDG+   G
Sbjct: 416 EMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANG 475

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           NI  A QL +++   ++ P  +T+N+L+ G+C+ GKV +AR+LLD +K  G++P  ++Y 
Sbjct: 476 NIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYN 535

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T ++ Y + G+++    +  EM T    PT +TY  +I+GLCK  + + A +LL++M   
Sbjct: 536 TLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSK 595

Query: 478 GVTPDQITYNTIIRSFCKCKDL 499
           G+TPD  TY +II +     DL
Sbjct: 596 GITPDDSTYLSIIEAMETVDDL 617



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 143/495 (28%), Positives = 252/495 (50%), Gaps = 35/495 (7%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           +++   C+  +  +A+        K F P++ + N ++S + KL   ++A  L+  M + 
Sbjct: 151 LLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRM 210

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            +    +++NI+I+ LC  G +++A EF   M   GV+P+                    
Sbjct: 211 NIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPN-------------------- 250

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
                          +VTY  +I G+C  G  +    + + M  +G + +   Y+  +S 
Sbjct: 251 ---------------VVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISG 295

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK GR++EA GL+ +M   GL P+ VTY+ LI G C +  + KA    +EM SK I  +
Sbjct: 296 LCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMAS 355

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +   +  L  +  + +A      +     + D V +NI+I+GY + G+   A  L  
Sbjct: 356 LVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLD 415

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           +++ K I P++VT+ SLIY   K  ++ +A  L   I+  GL P  + +   ++ +C  G
Sbjct: 416 EMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANG 475

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           NI R   LL+EM+   + P  +TY  +++G C++ K++EA QLL++M   G+ PD I+YN
Sbjct: 476 NIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYN 535

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           T+I  + K  D++ AF++ ++M     +PT  TYN LI GLC N + ++A+ LL  +   
Sbjct: 536 TLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSK 595

Query: 548 NISLTKVAYTTIIKA 562
            I+     Y +II+A
Sbjct: 596 GITPDDSTYLSIIEA 610



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 236/475 (49%), Gaps = 20/475 (4%)

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            + + +L + +  L + + A +    +  KG  P+I T   ++  + ++   +    L  
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M     + ++  ++++++ +CK G++ +A   +  ME +G+KP++VTY+ +I G C + 
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           K  +A  ++  M  K + P+ + + + + GLC++  + EA      ++    + + V YN
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +IDGY   G++ +A     ++I K I  S+VT+N  I+     G++ DA  ++  ++  
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G+ P AVT+   +N YC  G+ +R   LL EM  K I PT VTYT +I  L K+ +++EA
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
             L   +   G+ PD I +N +I   C   ++ +AFQLL +M    + P   TYN L+ G
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQG 505

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
            C  G ++ A  LL  ++   I    ++Y T+I  +   GD+  A     +M+  GF+ +
Sbjct: 506 YCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPT 565

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           I  Y                Q +C+      +Q G+     EL   M+  G+ PD
Sbjct: 566 ILTYNALI------------QGLCK------NQEGEHAE--ELLKEMVSKGITPD 600



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 223/448 (49%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           +++L+   C      EALE    +   G  P+  T + +   F  L++   AW +  ++ 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
                  + T+ ++I   C+ G +++  +    M + G K NV+ Y+ ++   C  G+  
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
            A  +   M+  GL+PD  TY+  I GLCK+ ++ +A  L  +M    + PN+  + A++
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            G C K  + +A  Y D +I    +  +V YN+ I      G +G+A  + +++ EK + 
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMM 388

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P  VT N LI G+C+ G    A  LLD +   G++P+ VTYT+ +    +   ++   AL
Sbjct: 389 PDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADAL 448

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
             +++ + + P  + +  +I G C    +  A QLL++M  + V PD+ITYNT+++ +C+
Sbjct: 449 FSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCR 508

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              + +A QLL++M    ++P   +YN LI G    GD+K+A  +   +       T + 
Sbjct: 509 EGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILT 568

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           Y  +I+  C   +   A     +MV KG
Sbjct: 569 YNALIQGLCKNQEGEHAEELLKEMVSKG 596



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 161/344 (46%), Gaps = 15/344 (4%)

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           CE +   EA   F  +     + ++   N M+  ++KL     A  LY ++    I  S+
Sbjct: 157 CELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSL 216

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            TFN +I   CK GK+  A+  +  ++  G++P+ VTY T ++ +C  G  QR   + Q 
Sbjct: 217 YTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQT 276

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M+ K + P   TY   I GLCK+ +L+EA  L+  M   G+ P+ +TYN +I  +C   D
Sbjct: 277 MKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGD 336

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L KA+   ++M    +  +  TYN+ I  L + G + +AD ++  ++E  +    V +  
Sbjct: 337 LDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNI 396

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNG 603
           +I  +C  GD  +A     +MV KG + ++  YT                + F  +   G
Sbjct: 397 LINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEG 456

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             PD  +   ++      G++   F+L   M    +LPD+   N
Sbjct: 457 LLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYN 500



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 110/287 (38%), Gaps = 27/287 (9%)

Query: 376 PSIVTFNSLIYG-FCKNGKVAD----ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           PSI     LI    C N  + D    AR  +D         + + +   + AYCE     
Sbjct: 111 PSINLIQRLILSPTCTNRTIFDELALARDRVDA-------KTTLIFDLLVRAYCELKKPN 163

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             L     ++ K   P   T   ++    K  + Q A  L  +M+ + +     T+N +I
Sbjct: 164 EALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMI 223

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CK   L+KA + +  M    ++P   TYN +I G C+ G  + A  +  ++++  + 
Sbjct: 224 NVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLE 283

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SF 595
                Y + I   C EG + +A    C+M+E G   +   Y                 ++
Sbjct: 284 PDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAY 343

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              M+S G         + + A    G +G    +   M + G++PD
Sbjct: 344 RDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPD 390



 Score = 40.0 bits (92), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 64/145 (44%), Gaps = 3/145 (2%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVYT 65
            G +  A  ++ +M  + +     TYN+L+    R   +     L D++K      +  +
Sbjct: 474 NGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHIS 533

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + +I G  ++  ++DA     E     F P++++ NA++   CK    E A+ L   M+
Sbjct: 534 YNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMV 593

Query: 126 KYGLHPDAFSYNILIHGLCIAGSME 150
             G+ PD  +Y  +I  +     +E
Sbjct: 594 SKGITPDDSTYLSIIEAMETVDDLE 618


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 151/539 (28%), Positives = 275/539 (51%), Gaps = 3/539 (0%)

Query: 47  MWDLYDD-IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIM 105
           +W L+ D I     P N+  N+++  G C+Q R+      L         P VV+ N ++
Sbjct: 231 VWKLFKDMIFKGPRPSNLTFNAMIC-GFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILI 289

Query: 106 SRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE 165
           +  C  G   VA     LM++ G+ P   ++  ++H LC  G++ EA +  + +   G+ 
Sbjct: 290 NACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIA 349

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           P+A  Y+ L  G+    +++ A  + +++   G  PD VT+ +L+ G+ + G +E+  +L
Sbjct: 350 PNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRL 409

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
            + ++  G  L+   Y V++SS+C +GR+DEA+ LL E+   GL   +V ++ LI    +
Sbjct: 410 LKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSR 469

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
                KA + Y  M     +P+S    ++L+GLC K  + EAR+    ++      + V 
Sbjct: 470 AGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVA 529

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y +++DGY K+ N+  A  L++++ E+ I P  V F +LI G  K G V +A  +   + 
Sbjct: 530 YTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMS 589

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             G  P+   Y + +   C+ G +   L L +EM  K +     T+ ++I G C++ +++
Sbjct: 590 AIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMK 649

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
            A++   DM  IG+ PD  T+N +I  +CK  D+  A +++N+M+   L+P   TYN  +
Sbjct: 650 FAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYM 709

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            G C    +  A  +L  L    I    V Y T++   C++  + +AM    ++++ GF
Sbjct: 710 HGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSD-ILDRAMILTAKLLKMGF 767



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 144/596 (24%), Positives = 254/596 (42%), Gaps = 86/596 (14%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N L+ G    G   EALE    M   GV P   + +IL +    +      WK+ + ++ 
Sbjct: 181 NTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIF 240

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           KG  P  +T+  +ICG+C+   V  G  L  +M       +V+ +++L+++ C  GR   
Sbjct: 241 KGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWV 300

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+  L+ M   G++P + T++ ++  LC++  V +A +L++ +    I+PN+  +  ++ 
Sbjct: 301 AIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMD 360

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI----------------- 359
           G  +   + +A + ++ +  +    D V +NI++ G+ K G I                 
Sbjct: 361 GYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFL 420

Query: 360 ------------------GEAVQLYRQLIEKRISPSIVTFNSLI---------------- 385
                              EA++L ++L+EK ++ S+V FNSLI                
Sbjct: 421 DSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAY 480

Query: 386 -------------------YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
                               G C+ G + +AR LL  +   G   + V YT  ++ Y + 
Sbjct: 481 RIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKM 540

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
            N++    L +EM+ + I P  V +T +I GL K   ++EA ++  +M  IG  P+   Y
Sbjct: 541 NNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAY 600

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           N++IR  C C  + +A +L  +M    L   + T+NI+IDG C  G +K A    + +Q 
Sbjct: 601 NSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQR 660

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF--FCMM----- 599
             +      +  +I  +C   D+  A     +M   G +  I  Y      +C M     
Sbjct: 661 IGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQ 720

Query: 600 --------LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                   +S G  PD      ML        L     L A ++K G +P+    N
Sbjct: 721 AVIILDQLISAGIVPDTVTYNTMLSGICS-DILDRAMILTAKLLKMGFIPNVITTN 775



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 238/507 (46%), Gaps = 39/507 (7%)

Query: 30  SIQTYNSLLYNL-RHTDIM--WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           S+ T+ ++L+ L R  +++    L+D I+      N    + ++DG  +   +  A L  
Sbjct: 316 SVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLY 375

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           +E       P  V+ N ++  + K G  E +  L   ++  GL  D+  Y++++  LC A
Sbjct: 376 EEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWA 435

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G ++EA++   ++   G+    + ++ L   +        A++  + ++  G  P   T 
Sbjct: 436 GRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTC 495

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             L+ G C+ G ++E   L   ML +GF +N +AY+VLL    K   ++ A  L  EM+ 
Sbjct: 496 NSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKE 555

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G+ PD V ++ LI GL K   V +A +++ EM +    PN+FA+ +++ GLC+   +TE
Sbjct: 556 RGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTE 615

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A      +     + D   +NI+IDG+ + G +  A++ +  +    + P I TFN LI 
Sbjct: 616 ALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIG 675

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G+CK   +  A  +++ +   GL+P   TY T+M+ YC    + + + +L ++ +  I P
Sbjct: 676 GYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVP 735

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP------------------------- 481
             VTY  ++ G+C    L  A+ L   +  +G  P                         
Sbjct: 736 DTVTYNTMLSGICSD-ILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWG 794

Query: 482 ----------DQITYNTIIRSFCKCKD 498
                     D+I+Y  + +++C  +D
Sbjct: 795 QKLREISFGFDEISYRILDQAYCLMQD 821



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 148/296 (50%), Gaps = 18/296 (6%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL------YNLRHTDIMWDLYDDIKVSETPR 61
           R G + +A  ++ +M E    ++   Y  LL       NL     +W    +       R
Sbjct: 504 RKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKE-------R 556

Query: 62  NVYTNSI----VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            +Y +++    +IDGL +   +++A     E +   F P+  + N+++   C  G    A
Sbjct: 557 GIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEA 616

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M + GL  D F++NI+I G C  G M+ A+E   DM R G+ PD  T++IL  G
Sbjct: 617 LKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGG 676

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +     + GA +++ K+   G DPDI TY   + GYC++  + + + + + ++S G   +
Sbjct: 677 YCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPD 736

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            + Y+ +LS +C S  +D A+ L  ++  +G  P+++T ++L+   CKQ    KA+
Sbjct: 737 TVTYNTMLSGIC-SDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKAL 791



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 137/290 (47%), Gaps = 7/290 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDI----KVSETPR 61
           Y +   +  A F+  +MKE  +      + +L+  L     + + Y+       +   P 
Sbjct: 537 YFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPN 596

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N   NS+ I GLC   R+ +A+   +E   K       + N I+  +C+ G  + A   F
Sbjct: 597 NFAYNSL-IRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETF 655

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + GL PD F++NILI G C A  M  A E  N M   G++PD  TY+    G+  +
Sbjct: 656 LDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRM 715

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +++ A  ++ +L+  G  PD VTY  ++ G C    ++  + L   +L  GF  NVI  
Sbjct: 716 RKMNQAVIILDQLISAGIVPDTVTYNTMLSGICS-DILDRAMILTAKLLKMGFIPNVITT 774

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC-KQDKVH 290
           ++LLS  CK G  ++AL    ++  +    D ++Y IL +  C  QD V 
Sbjct: 775 NMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYCLMQDDVE 824


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 269/507 (53%), Gaps = 3/507 (0%)

Query: 30  SIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           SI  +N LL     ++  D++  L + ++      N+YT +I+I+  C++S++  A+  L
Sbjct: 9   SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            +     + PS+V+L+++++ YC       A  L   M++ G  PD  ++  LIHGL + 
Sbjct: 69  GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
               EA+   + M + G +P+ +TY ++  G      I  A+ ++ K+     + D+V +
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             +I   C+  +V++ L L + M ++G + NV+ YS L+S +C  GR  +A  LL +M  
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
             + P+LVT++ LI    K+ K  +A +L+++M  + I P+ F + +++ G C  + + +
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A+  F+ ++  +C  D+  YN +I G+ K   + +  +L+R++  + +    VT+ +LI 
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G   +G   +A+++   +   G+ P  +TY+  ++  C  G +++ L +   M+   I  
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
               YT +I+G+CK  K+ +   L   + + GV P+ +TYNT+I   C  + L++A+ LL
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGD 533
            +M      P S TYN LI     +GD
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGD 515



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 243/467 (52%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           N +++ +C+     +A  L   M+K G  P   + + L++G C    + +A+   + M  
Sbjct: 49  NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 108

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            G  PD IT++ L  G  L ++ S A  ++ +++ +G  P++VTY V++ G C+ G+++ 
Sbjct: 109 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 168

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
              L   M +   + +V+ ++ ++ S+CK   +D+AL L  EME  G++P++VTYS LI 
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
            LC   +   A QL ++M  K+I+PN     A++    ++    EA    D +I  +   
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D+  YN +I+G+     + +A Q++  ++ K   P + T+N+LI GFCK+ +V D   L 
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +   GL    VTYTT +     +G+      + ++M +  + P  +TY++++ GLC  
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            KL++A+++ + M    +  D   Y T+I   CK   +   + L   + L  ++P   TY
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           N +I GLC    L+ A  LL  ++E         Y T+I+AH  +GD
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 161/554 (29%), Positives = 259/554 (46%), Gaps = 50/554 (9%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+   N ++S   K+   ++   L   M + G+  + ++YNILI+  C    +  AL  
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + G EP  +T S L  G+    +IS A  ++ +++  G  PD +T+T LI G   
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
                E + L + M+ +G + N++ Y V+++ +CK G ID A  LL +MEA  ++ D+V 
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ +I  LCK   V  A+ L+ EM +K I PN                            
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPN---------------------------- 219

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                  VV Y+ +I      G   +A QL   +IEK+I+P++VTFN+LI  F K GK  
Sbjct: 220 -------VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A +L D +    ++P   TY + +N +C    + +   + + M +K   P   TY  +I
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           KG CK  ++++  +L  +M   G+  D +TY T+I+      D   A ++  QM    + 
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TY+IL+DGLC NG L+ A  +   +Q+  I L    YTT+I+  C  G V      
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452

Query: 576 FCQMVEKGFEISIRDYTK--SFFC-------------MMLSNGFPPDQEICEVMLIAFHQ 620
           FC +  KG + ++  Y    S  C              M  +G  PD      ++ A  +
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512

Query: 621 GGDLGSVFELAAVM 634
            GD  +  EL   M
Sbjct: 513 DGDKAASAELIREM 526



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 223/466 (47%), Gaps = 15/466 (3%)

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           +K+   G   ++ TY +LI  +C+   +   L L   M+  G++ +++  S LL+  C  
Sbjct: 34  EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            RI +A+ L+ +M  +G +PD +T++ LI GL   +K  +A+ L + M  +   PN   +
Sbjct: 94  KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
           G ++ GLC++  I  A    + +  +    DVV++N +ID   K  ++ +A+ L++++  
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K I P++VT++SLI   C  G+ +DA +LL  +    + P+ VT+   ++A+ +EG    
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              L  +M  ++I P   TY  +I G C   +L +A Q+ E M      PD  TYNT+I+
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            FCK K +    +L  +M    L   + TY  LI GL  +GD  NA  +   +    +  
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFF 596
             + Y+ ++   C  G + KA+  F  M +   ++ I  YT                  F
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           C +   G  P+      M+        L   + L   M + G LPD
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 499



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 211/439 (48%), Gaps = 3/439 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y     + DAV ++ +M E+  +    T+ +L++ L           L D +       N
Sbjct: 90  YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 149

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T  +V++GLC++  +  A   L +    +    VV  N I+   CK    + A  LF 
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 209

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G+ P+  +Y+ LI  LC  G   +A +  +DM    + P+ +T++ L   F    
Sbjct: 210 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A K+   ++ +  DPDI TY  LI G+C    +++  ++ E M+S+    ++  Y+
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 329

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   CKS R+++   L  EM   GL  D VTY+ LI+GL        A +++ +M S 
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   +  +L GLC    + +A   FD +  S    D+ +Y  MI+G  K G + + 
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L+  L  K + P++VT+N++I G C    + +A  LL  +K  G  P + TY T + A
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509

Query: 423 YCEEGNIQRLLALLQEMET 441
           +  +G+      L++EM +
Sbjct: 510 HLRDGDKAASAELIREMRS 528



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 147/323 (45%), Gaps = 9/323 (2%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTN 66
           G   DA  +++ M E  +  ++ T+N+L+          +   L+DD+       +++T 
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I+G C   RL  A    +    K+  P + + N ++  +CK    E    LF  M  
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL  D  +Y  LI GL   G  + A +    M   GV PD +TYSIL  G     ++  
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +V   +       DI  YT +I G C+ G V++G  L   +  +G K NV+ Y+ ++S
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C    + EA  LL +M+  G  PD  TY+ LIR   +      + +L  EM S R   
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR--- 530

Query: 307 NSFAHGAILLGLCEKEMITEARM 329
             F   A  +GL    M+ + R+
Sbjct: 531 --FVGDASTIGLVA-NMLHDGRL 550



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 15/294 (5%)

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +++ R  PSI  FN L+    K  K      L + ++  G+  +  TY   +N +C    
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           I   LALL +M      P+ VT + ++ G C   ++ +AV L++ M  +G  PD IT+ T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I          +A  L+++M     +P   TY ++++GLC  GD+  A  LL  ++   
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM---------- 598
           I    V + TII + C    V  A+  F +M  KG   ++  Y+    C+          
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 599 -----MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                M+     P+      ++ AF + G      +L   MIK  + PD F  N
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 151/539 (28%), Positives = 261/539 (48%), Gaps = 20/539 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P   S N ++ R  K G  ++ +  F  M+  G+ P  F+YN++I  LC  G +E +   
Sbjct: 193 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 252

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M   G+ PD +TY+ L  G+  +  +     +  ++   G  PDI+TY  LI  YC+
Sbjct: 253 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 312

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              +    +    M + G K NV+ YS L+ + CK G +  A+ LL +M   GL P+  T
Sbjct: 313 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFT 372

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI   CK   + +A +L N+M    +  N   + A+L GLC+   + EA   F S++
Sbjct: 373 YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 432

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 +  +Y  ++ GY+K   + +A+++ +Q+ E  I P ++ + S+I+G C   K+ 
Sbjct: 433 KDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLE 492

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           + + +L+ +K  G+  + V  TT ++AY + G     L   QEM+   +  T VTY V+I
Sbjct: 493 ETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLI 552

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLC+   ++ AV     M  +G+ P+   Y ++I   C    +  A +L ++M    + 
Sbjct: 553 DGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMT 612

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P    +  LIDG   +G+L+ A  L+  + E  I      YT+++      G++H+A  F
Sbjct: 613 PDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKF 672

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
           F +M+EK                    G  P++ +C  +L  +++ G L    EL   M
Sbjct: 673 FNEMIEK--------------------GILPEEVLCICLLREYYKRGQLDEAIELKNEM 711



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/545 (26%), Positives = 265/545 (48%), Gaps = 20/545 (3%)

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
            + + S + +LG  E A   F  M  +   P A S N L+H L  +G+ +   +F NDM 
Sbjct: 163 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 222

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
             G+ P   TY+++         +  + ++  ++   G  PD+VTY  LI GY ++G++E
Sbjct: 223 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 282

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
           E   L   M   G   ++I Y+ L++  CK  ++  A     EM+  GLKP++VTYS LI
Sbjct: 283 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 342

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
              CK+  +  AI+L  +M    + PN F + +++   C+   +TEA    + ++ +   
Sbjct: 343 DAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK 402

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            ++V Y  ++DG  K G + EA +++R +++  ISP+   + +L++G+ K  ++ DA ++
Sbjct: 403 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKI 462

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L  +    ++P  + Y + +  +C +  ++    +L+EM+++ I    V  T +I    K
Sbjct: 463 LKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFK 522

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             K  +A+   ++M  +GV    +TY  +I   C+   +  A     +M    L+P  A 
Sbjct: 523 AGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAV 582

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y  LIDGLC N  +++A  L   +Q   ++    A+T +I  +   G++ +A+    +M 
Sbjct: 583 YTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMT 642

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           E   E  +  YT                     ++  F Q G+L    +    MI+ G+L
Sbjct: 643 ELAIEFDLHVYTS--------------------LVSGFSQCGELHQARKFFNEMIEKGIL 682

Query: 641 PDKFL 645
           P++ L
Sbjct: 683 PEEVL 687



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/543 (25%), Positives = 253/543 (46%), Gaps = 38/543 (6%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPR 61
           V+   G++ +A    ++M+        ++ N LL+ L  +    ++   ++D+  +    
Sbjct: 169 VFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAP 228

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+T +++ID LC++  L+++     +       P VV+ N+++  Y K+G  E    LF
Sbjct: 229 SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 288

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G  PD  +YN LI+  C    M  A E+ ++M  +G++P+ +TYS L   F   
Sbjct: 289 NEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKE 348

Query: 182 SQISGA-----------------------------------WKVIQKLLIKGSDPDIVTY 206
             + GA                                   WK++  +L  G   +IVTY
Sbjct: 349 GMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTY 408

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T L+ G C+ G + E  ++   ML  G   N   Y+ L+    K+ R+++A+ +L +M  
Sbjct: 409 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 468

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
             +KPDL+ Y  +I G C Q K+ +   +  EM S+ IS N      I+    +    ++
Sbjct: 469 CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSD 528

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A  +F  +        +V Y ++IDG  + G +  AV  + +++   + P++  + SLI 
Sbjct: 529 ALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLID 588

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G C N  +  A++L D ++  G+ P    +T  ++   + GN+Q  L L+  M   AI  
Sbjct: 589 GLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF 648

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
               YT ++ G  +  +L +A +   +M   G+ P+++    ++R + K   L +A +L 
Sbjct: 649 DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELK 708

Query: 507 NQM 509
           N+M
Sbjct: 709 NEM 711



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 213/441 (48%), Gaps = 3/441 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           Y + G + +   +  +MK++     I TYN L+            ++ + ++K +    N
Sbjct: 275 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 334

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T S +ID  C++  +Q AI  L +       P+  +  +++   CK G    A  L  
Sbjct: 335 VVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 394

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML+ G+  +  +Y  L+ GLC AG M EA E    M + G+ P+   Y+ L  G+    
Sbjct: 395 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 454

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A K+++++      PD++ Y  +I G+C    +EE   + E M S+G   N +  +
Sbjct: 455 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 514

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++ +  K+G+  +AL    EM+ VG++  +VTY +LI GLC+   V  A+  +  M S 
Sbjct: 515 TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSL 574

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN   + +++ GLC    I  A+  FD +       D+  +  +IDG +K GN+ EA
Sbjct: 575 GLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEA 634

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + L  ++ E  I   +  + SL+ GF + G++  AR+  + +   G+ P  V     +  
Sbjct: 635 LVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLRE 694

Query: 423 YCEEGNIQRLLALLQEMETKA 443
           Y + G +   + L  EME  A
Sbjct: 695 YYKRGQLDEAIELKNEMERMA 715



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 240/530 (45%), Gaps = 29/530 (5%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G      SY I++H +  A    +A         H    + I  S +  GF + +     
Sbjct: 99  GFRHTTESYCIIVHLVFRARMYTDA---------HDTVKEVIMNSRMDMGFPVCNIFDML 149

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W   + + + GS      + VL   + ++G +EE  +    M +        + + LL  
Sbjct: 150 WST-RNICVSGSG----VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHR 204

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           + KSG          +M   G+ P + TY+++I  LCK+  +  + +L+ +M    +SP+
Sbjct: 205 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPD 264

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              + +++ G  +   + E    F+ +    C+ D++ YN +I+ Y K   +  A + + 
Sbjct: 265 VVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFS 324

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++    + P++VT+++LI  FCK G +  A +LL  ++  GL P+  TYT+ ++A C+ G
Sbjct: 325 EMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAG 384

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           N+     LL +M    +    VTYT ++ GLCK  ++ EA ++   M   G++P+Q  Y 
Sbjct: 385 NLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYT 444

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++  + K + +  A ++L QM   N++P    Y  +I G C    L+    +L  ++  
Sbjct: 445 ALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSR 504

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------------T 592
            IS   V  TTII A+   G    A+ FF +M + G E +I  Y                
Sbjct: 505 GISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELA 564

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             +FC MLS G  P+  +   ++        + S  +L   M   G+ PD
Sbjct: 565 VDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPD 614



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 167/350 (47%), Gaps = 25/350 (7%)

Query: 321 KEMITEARM--------YFDSLIMSN--CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           KE+I  +RM         FD L  +   C+    +++++   +V+LG + EA + + ++ 
Sbjct: 128 KEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMR 187

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
             R  P   + N L++   K+G     R+  + +   G+ PS  TY   ++  C+EG+++
Sbjct: 188 NFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLE 247

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L  +M    + P  VTY  +I G  K   L+E   L  +M  +G  PD ITYN +I
Sbjct: 248 NSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLI 307

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             +CK + + +AF+  ++M  + L+P   TY+ LID  C  G ++ A  LL  ++   + 
Sbjct: 308 NCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLL 367

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSF 595
             +  YT++I A+C  G++ +A      M++ G +++I  YT               +  
Sbjct: 368 PNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEV 427

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           F  ML +G  P+Q++   ++  + +   +    ++   M +  + PD  L
Sbjct: 428 FRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLIL 477


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 162/585 (27%), Positives = 301/585 (51%), Gaps = 14/585 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G V +A     + KE  +K+    Y+ ++  +    ++++  +L +++K      +  
Sbjct: 232 KEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEA 291

Query: 65  TNSIVIDGLCQQSRLQDAILFLQE--TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           T + VI     Q  + +A+   +E    GK    ++V   ++M  YC  G  + A  LF 
Sbjct: 292 TFTSVIVACVAQGNMVEALRLKEEMINCGKPM--NLVVATSLMKGYCAQGNLDSALNLFN 349

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            + + GL P+  +Y++LI G C +G++E+A E    M  +G+ P     + L +G+    
Sbjct: 350 KITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGY---- 405

Query: 183 QISGAWKVIQKLLIKGSD---PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
             +  W+   KL  +  D    +I TY +++   C+ G ++E   L + M++QG   NV+
Sbjct: 406 LKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVV 465

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           +Y+ ++   C+ G +D A  +  +M A  LKP++VTYSILI G  K+    KA+ L+++M
Sbjct: 466 SYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 525

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            S  I+P  F    I+ GLC+   ++EAR    + +    I   + YN ++DG++K GNI
Sbjct: 526 LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI 585

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A+ +YR++ E  +SP++VT+ SLI GFCK+ ++  A +  D ++  GLE     Y+  
Sbjct: 586 DSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSAL 645

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ +C+  +++    L  E+    + P  + Y  +I G      ++ A+   + M    +
Sbjct: 646 IDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRI 705

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             D  TY T+I    K   L  A  L  +M    + P   T+++L++GLC  G L+NA  
Sbjct: 706 PCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARK 765

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +L  +   N++ + + Y T+I  +  EG++ +A T   +M+++G 
Sbjct: 766 ILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 810



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 149/590 (25%), Positives = 284/590 (48%), Gaps = 18/590 (3%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +++   + +R+++AI        ++  P V  +N +++   +       + L+  M+  G
Sbjct: 156 LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG 215

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           ++ D F+ ++++      G +EEA E+  +    GV+ DA  YSI+ +        +   
Sbjct: 216 IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGL 275

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++++++  +G  P   T+T +I      GN+ E L+L+E M++ G  +N++  + L+   
Sbjct: 276 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 335

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C  G +D AL L  ++   GL P+ VTYS+LI G C    + KA +LY +M    I P+ 
Sbjct: 336 CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSV 395

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNC-IQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           F   ++L G  +  +  EA   FD  +  +C + ++  YNIM+    K G + EA  L  
Sbjct: 396 FNVNSLLRGYLKAPLWEEASKLFDEAV--DCGVANIFTYNIMMSWLCKGGKMDEACSLLD 453

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            ++ + + P++V++N +I G C+ G +  A  +   +    L+P+ VTY+  ++   ++G
Sbjct: 454 NMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKG 513

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           + ++ L L  +M +  I PT  T+  +I GLCK  ++ EA   L++    G  P  +TYN
Sbjct: 514 DSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYN 573

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           +I+  F K  ++  A  +  +M    + P   TY  LI+G C +  +  A      ++E 
Sbjct: 574 SIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREK 633

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS----------IRDYTK---- 593
            + L   AY+ +I   C   D+  A   F +++E G   +           RD       
Sbjct: 634 GLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAA 693

Query: 594 -SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             ++  M+++  P D      ++    + G L    +L   M+  G++PD
Sbjct: 694 LVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPD 743



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 174/659 (26%), Positives = 305/659 (46%), Gaps = 25/659 (3%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDIKVSETPR 61
            Y R   + +A+     M   D+   +   N LL  L   ++   + DLY+ + +     
Sbjct: 159 AYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYG 218

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + +T  +++    ++ R+++A  + +ET  +       + + I+   CK   + +   L 
Sbjct: 219 DHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELL 278

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G  P   ++  +I      G+M EAL    +M   G   + +  + L KG+   
Sbjct: 279 EEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQ 338

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A  +  K+   G  P+ VTY+VLI G C  GN+E+  +L   M   G   +V   
Sbjct: 339 GNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNV 398

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL    K+   +EA  L  E    G+  ++ TY+I++  LCK  K+ +A  L + M +
Sbjct: 399 NSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVN 457

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + + PN  ++  ++LG C K  +  A   F  ++  +   +VV Y+I+IDG  K G+  +
Sbjct: 458 QGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK 517

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ L+ Q++   I+P+  TFN++I G CK G++++AR  L      G  PS +TY + ++
Sbjct: 518 ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVD 577

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            + +EGNI   LA+ +EM    + P  VTYT +I G CK  ++  A++  ++M   G+  
Sbjct: 578 GFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLEL 637

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D   Y+ +I  FCK +D+  A  L  ++    L P    YN +I G     DL N +  L
Sbjct: 638 DVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF---RDLNNMEAAL 694

Query: 542 VSLQE---HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIR-- 589
           V  ++     I      YTT+I     EG +  A   + +M+ KG       F + +   
Sbjct: 695 VWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGL 754

Query: 590 ------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                 +  +     M      P   I   ++  + + G+L   F L   M+  GL+PD
Sbjct: 755 CNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPD 813



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 232/456 (50%), Gaps = 6/456 (1%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVY 64
           +G +  A  +  +MK   +  S+   NSLL        +W+    L+D+  V     N++
Sbjct: 373 SGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAP-LWEEASKLFDE-AVDCGVANIF 430

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I++  LC+  ++ +A   L     +   P+VVS N ++  +C+ G  ++A  +F  M
Sbjct: 431 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 490

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L   L P+  +Y+ILI G    G  E+AL+  + M    + P   T++ +  G   + Q+
Sbjct: 491 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 550

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           S A   ++  L +G  P  +TY  ++ G+ + GN++  L +   M   G   NV+ Y+ L
Sbjct: 551 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 610

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++  CKS RID AL    EM   GL+ D+  YS LI G CK+  +  A  L+ E+    +
Sbjct: 611 INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 670

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SPN   + +++ G  +   +  A +++  +I      D+  Y  +IDG +K G +  A  
Sbjct: 671 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 730

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           LY +++ K I P I+TF+ L+ G C  G++ +AR++L+ +    + PS + Y T +  Y 
Sbjct: 731 LYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYF 790

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            EGN++    L  EM  + + P  VTY ++I G  K
Sbjct: 791 REGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 826



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 245/488 (50%), Gaps = 4/488 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           Y   G +  A+ +  K+ E  L  +  TY+ L+    N  + +   +LY  +K++  P +
Sbjct: 335 YCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPS 394

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+  + ++ G  +    ++A     E        ++ + N +MS  CK G  + A  L  
Sbjct: 395 VFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLD 453

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+  G+ P+  SYN +I G C  G+M+ A    +DM    ++P+ +TYSIL  G     
Sbjct: 454 NMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKG 513

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               A  +  ++L     P   T+  +I G C++G + E     +  L +GF  + + Y+
Sbjct: 514 DSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYN 573

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++    K G ID AL +  EM   G+ P++VTY+ LI G CK +++  A++  +EM  K
Sbjct: 574 SIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREK 633

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +  +  A+ A++ G C++  +  A+  F  L+      + ++YN MI G+  L N+  A
Sbjct: 634 GLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAA 693

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +  Y+++I  RI   + T+ +LI G  K G++  A  L   +   G+ P  +T+   +N 
Sbjct: 694 LVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNG 753

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C +G ++    +L+EM+ K + P+ + Y  +I G  ++  L+EA  L ++M   G+ PD
Sbjct: 754 LCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPD 813

Query: 483 QITYNTII 490
            +TY+ +I
Sbjct: 814 DVTYDILI 821



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 241/503 (47%), Gaps = 36/503 (7%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N+   + ++ G C Q  L  A+    +       P+ V+ + ++   C  G  E A  
Sbjct: 322 PMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASE 381

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L+  M   G+ P  F+ N L+ G   A   EEA +  ++    GV  +  TY+I+     
Sbjct: 382 LYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLC 440

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A  ++  ++ +G  P++V+Y  +I G+C+ GN++    +   ML++  K NV+
Sbjct: 441 KGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVV 500

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK-------QDK---- 288
            YS+L+    K G  ++AL L  +M ++ + P   T++ +I GLCK       +DK    
Sbjct: 501 TYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNF 560

Query: 289 ------------------------VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
                                   +  A+ +Y EMC   +SPN   + +++ G C+   I
Sbjct: 561 LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 620

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
             A    D +       DV  Y+ +IDG+ K  ++  A  L+ +L+E  +SP+ + +NS+
Sbjct: 621 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 680

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I GF     +  A      +    +     TYTT ++   +EG +     L  EM +K I
Sbjct: 681 ISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 740

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  +T+ V++ GLC + +L+ A ++LE+M    +TP  + YNT+I  + +  +L++AF 
Sbjct: 741 VPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFT 800

Query: 505 LLNQMWLHNLEPTSATYNILIDG 527
           L ++M    L P   TY+ILI+G
Sbjct: 801 LHDEMLDRGLVPDDVTYDILING 823



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/547 (23%), Positives = 251/547 (45%), Gaps = 21/547 (3%)

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
            N +++ Y +    E A   F  M+   + P     NIL+  L     + E  +  N M 
Sbjct: 153 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 212

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
             G+  D  T  ++ +      ++  A +  ++   +G   D   Y+++I   C+  N  
Sbjct: 213 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 272

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
            GL+L E M  +G+  +   ++ ++ +    G + EAL L  EM   G   +LV  + L+
Sbjct: 273 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 332

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
           +G C Q  +  A+ L+N++    + PN   +  ++ G C    I +A   +  + ++   
Sbjct: 333 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 392

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
             V   N ++ GY+K     EA +L+ + ++  ++ +I T+N ++   CK GK+ +A  L
Sbjct: 393 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSL 451

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           LD +   G+ P+ V+Y   +  +C +GN+    ++  +M  + + P  VTY+++I G  K
Sbjct: 452 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 511

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
           +   ++A+ L + M  + + P   T+NTII   CK   + +A   L         P+  T
Sbjct: 512 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 571

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           YN ++DG    G++ +A  +   + E  +S   V YT++I   C    +  A+    +M 
Sbjct: 572 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 631

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           EKG E+ +  Y+                     ++  F +  D+ S  +L   +++ GL 
Sbjct: 632 EKGLELDVTAYS--------------------ALIDGFCKRRDMESAQDLFFELLEVGLS 671

Query: 641 PDKFLIN 647
           P++ + N
Sbjct: 672 PNRIVYN 678



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 193/398 (48%), Gaps = 12/398 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRH-----TDIMWDLYDDIKVSETPRN 62
           + G + +A  ++  M    +  ++ +YN ++  L H      D+   ++ D+   +   N
Sbjct: 441 KGGKMDEACSLLDNMVNQGMVPNVVSYNDMI--LGHCRKGNMDMASSVFSDMLARDLKPN 498

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T SI+IDG  ++   + A+    +       P+  + N I++  CK+G    A+    
Sbjct: 499 VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLK 558

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             L+ G  P   +YN ++ G    G+++ AL    +M   GV P+ +TY+ L  GF   +
Sbjct: 559 NFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN 618

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +I  A K   ++  KG + D+  Y+ LI G+C+  ++E    L   +L  G   N I Y+
Sbjct: 619 RIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYN 678

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++S       ++ AL    +M    +  DL TY+ LI GL K+ ++  A  LY EM SK
Sbjct: 679 SMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSK 738

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I P+      ++ GLC K  +  AR   + +   N    V++YN +I GY + GN+ EA
Sbjct: 739 GIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEA 798

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
             L+ +++++ + P  VT++ LI     NGK    R L
Sbjct: 799 FTLHDEMLDRGLVPDDVTYDILI-----NGKFKGDRSL 831



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/431 (21%), Positives = 181/431 (41%), Gaps = 38/431 (8%)

Query: 214 CQIGNVEEGLK-LREVMLSQGFKLNVIAYSVLLSSMCKSGRID-EALGLLYEMEAVGLKP 271
           C + + +  L+  +     +GF   V AY VLL  + +S      A  LL    +    P
Sbjct: 69  CHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSDP 128

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
             V +   +    K+       +++N + +  I  N                I  A   F
Sbjct: 129 SPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANR---------------IENAIDCF 173

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           +++I  + I  V   NI++   V+   IGE   LY +++ + I     T + ++    K 
Sbjct: 174 NAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKE 233

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G+V +A       K  G++  A  Y+  + A C++ N    L LL+EM+ +   P+  T+
Sbjct: 234 GRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATF 293

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           T VI     Q  + EA++L E+M   G   + +   ++++ +C   +L  A  L N++  
Sbjct: 294 TSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITE 353

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             L P   TY++LI+G C +G+++ A  L   ++ + I  +     ++++ +       +
Sbjct: 354 DGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEE 413

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           A   F + V+ G                ++N F        +M+    +GG +     L 
Sbjct: 414 ASKLFDEAVDCG----------------VANIF-----TYNIMMSWLCKGGKMDEACSLL 452

Query: 632 AVMIKSGLLPD 642
             M+  G++P+
Sbjct: 453 DNMVNQGMVPN 463


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 162/585 (27%), Positives = 301/585 (51%), Gaps = 14/585 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G V +A     + KE  +K+    Y+ ++  +    ++++  +L +++K      +  
Sbjct: 272 KEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEA 331

Query: 65  TNSIVIDGLCQQSRLQDAILFLQE--TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           T + VI     Q  + +A+   +E    GK    ++V   ++M  YC  G  + A  LF 
Sbjct: 332 TFTSVIVACVAQGNMVEALRLKEEMINCGKPM--NLVVATSLMKGYCAQGNLDSALNLFN 389

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            + + GL P+  +Y++LI G C +G++E+A E    M  +G+ P     + L +G+    
Sbjct: 390 KITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGY---- 445

Query: 183 QISGAWKVIQKLLIKGSD---PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
             +  W+   KL  +  D    +I TY +++   C+ G ++E   L + M++QG   NV+
Sbjct: 446 LKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVV 505

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           +Y+ ++   C+ G +D A  +  +M A  LKP++VTYSILI G  K+    KA+ L+++M
Sbjct: 506 SYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 565

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            S  I+P  F    I+ GLC+   ++EAR    + +    I   + YN ++DG++K GNI
Sbjct: 566 LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI 625

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A+ +YR++ E  +SP++VT+ SLI GFCK+ ++  A +  D ++  GLE     Y+  
Sbjct: 626 DSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSAL 685

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ +C+  +++    L  E+    + P  + Y  +I G      ++ A+   + M    +
Sbjct: 686 IDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRI 745

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             D  TY T+I    K   L  A  L  +M    + P   T+++L++GLC  G L+NA  
Sbjct: 746 PCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARK 805

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +L  +   N++ + + Y T+I  +  EG++ +A T   +M+++G 
Sbjct: 806 ILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 850



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/590 (25%), Positives = 284/590 (48%), Gaps = 18/590 (3%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +++   + +R+++AI        ++  P V  +N +++   +       + L+  M+  G
Sbjct: 196 LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG 255

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           ++ D F+ ++++      G +EEA E+  +    GV+ DA  YSI+ +        +   
Sbjct: 256 IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGL 315

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++++++  +G  P   T+T +I      GN+ E L+L+E M++ G  +N++  + L+   
Sbjct: 316 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 375

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C  G +D AL L  ++   GL P+ VTYS+LI G C    + KA +LY +M    I P+ 
Sbjct: 376 CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSV 435

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNC-IQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           F   ++L G  +  +  EA   FD  +  +C + ++  YNIM+    K G + EA  L  
Sbjct: 436 FNVNSLLRGYLKAPLWEEASKLFDEAV--DCGVANIFTYNIMMSWLCKGGKMDEACSLLD 493

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            ++ + + P++V++N +I G C+ G +  A  +   +    L+P+ VTY+  ++   ++G
Sbjct: 494 NMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKG 553

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           + ++ L L  +M +  I PT  T+  +I GLCK  ++ EA   L++    G  P  +TYN
Sbjct: 554 DSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYN 613

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           +I+  F K  ++  A  +  +M    + P   TY  LI+G C +  +  A      ++E 
Sbjct: 614 SIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREK 673

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS----------IRDYTK---- 593
            + L   AY+ +I   C   D+  A   F +++E G   +           RD       
Sbjct: 674 GLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAA 733

Query: 594 -SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             ++  M+++  P D      ++    + G L    +L   M+  G++PD
Sbjct: 734 LVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPD 783



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 174/659 (26%), Positives = 305/659 (46%), Gaps = 25/659 (3%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDIKVSETPR 61
            Y R   + +A+     M   D+   +   N LL  L   ++   + DLY+ + +     
Sbjct: 199 AYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYG 258

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + +T  +++    ++ R+++A  + +ET  +       + + I+   CK   + +   L 
Sbjct: 259 DHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELL 318

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G  P   ++  +I      G+M EAL    +M   G   + +  + L KG+   
Sbjct: 319 EEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQ 378

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A  +  K+   G  P+ VTY+VLI G C  GN+E+  +L   M   G   +V   
Sbjct: 379 GNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNV 438

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL    K+   +EA  L  E    G+  ++ TY+I++  LCK  K+ +A  L + M +
Sbjct: 439 NSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVN 497

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + + PN  ++  ++LG C K  +  A   F  ++  +   +VV Y+I+IDG  K G+  +
Sbjct: 498 QGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK 557

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ L+ Q++   I+P+  TFN++I G CK G++++AR  L      G  PS +TY + ++
Sbjct: 558 ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVD 617

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            + +EGNI   LA+ +EM    + P  VTYT +I G CK  ++  A++  ++M   G+  
Sbjct: 618 GFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLEL 677

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D   Y+ +I  FCK +D+  A  L  ++    L P    YN +I G     DL N +  L
Sbjct: 678 DVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF---RDLNNMEAAL 734

Query: 542 VSLQE---HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIR-- 589
           V  ++     I      YTT+I     EG +  A   + +M+ KG       F + +   
Sbjct: 735 VWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGL 794

Query: 590 ------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                 +  +     M      P   I   ++  + + G+L   F L   M+  GL+PD
Sbjct: 795 CNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPD 853



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 232/456 (50%), Gaps = 6/456 (1%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVY 64
           +G +  A  +  +MK   +  S+   NSLL        +W+    L+D+  V     N++
Sbjct: 413 SGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAP-LWEEASKLFDE-AVDCGVANIF 470

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I++  LC+  ++ +A   L     +   P+VVS N ++  +C+ G  ++A  +F  M
Sbjct: 471 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 530

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L   L P+  +Y+ILI G    G  E+AL+  + M    + P   T++ +  G   + Q+
Sbjct: 531 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 590

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           S A   ++  L +G  P  +TY  ++ G+ + GN++  L +   M   G   NV+ Y+ L
Sbjct: 591 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 650

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++  CKS RID AL    EM   GL+ D+  YS LI G CK+  +  A  L+ E+    +
Sbjct: 651 INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 710

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SPN   + +++ G  +   +  A +++  +I      D+  Y  +IDG +K G +  A  
Sbjct: 711 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 770

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           LY +++ K I P I+TF+ L+ G C  G++ +AR++L+ +    + PS + Y T +  Y 
Sbjct: 771 LYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYF 830

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            EGN++    L  EM  + + P  VTY ++I G  K
Sbjct: 831 REGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 866



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 245/488 (50%), Gaps = 4/488 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           Y   G +  A+ +  K+ E  L  +  TY+ L+    N  + +   +LY  +K++  P +
Sbjct: 375 YCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPS 434

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+  + ++ G  +    ++A     E        ++ + N +MS  CK G  + A  L  
Sbjct: 435 VFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLD 493

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+  G+ P+  SYN +I G C  G+M+ A    +DM    ++P+ +TYSIL  G     
Sbjct: 494 NMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKG 553

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               A  +  ++L     P   T+  +I G C++G + E     +  L +GF  + + Y+
Sbjct: 554 DSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYN 613

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++    K G ID AL +  EM   G+ P++VTY+ LI G CK +++  A++  +EM  K
Sbjct: 614 SIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREK 673

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +  +  A+ A++ G C++  +  A+  F  L+      + ++YN MI G+  L N+  A
Sbjct: 674 GLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAA 733

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +  Y+++I  RI   + T+ +LI G  K G++  A  L   +   G+ P  +T+   +N 
Sbjct: 734 LVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNG 793

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C +G ++    +L+EM+ K + P+ + Y  +I G  ++  L+EA  L ++M   G+ PD
Sbjct: 794 LCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPD 853

Query: 483 QITYNTII 490
            +TY+ +I
Sbjct: 854 DVTYDILI 861



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 241/503 (47%), Gaps = 36/503 (7%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N+   + ++ G C Q  L  A+    +       P+ V+ + ++   C  G  E A  
Sbjct: 362 PMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASE 421

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L+  M   G+ P  F+ N L+ G   A   EEA +  ++    GV  +  TY+I+     
Sbjct: 422 LYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLC 480

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A  ++  ++ +G  P++V+Y  +I G+C+ GN++    +   ML++  K NV+
Sbjct: 481 KGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVV 540

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK-------QDK---- 288
            YS+L+    K G  ++AL L  +M ++ + P   T++ +I GLCK       +DK    
Sbjct: 541 TYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNF 600

Query: 289 ------------------------VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
                                   +  A+ +Y EMC   +SPN   + +++ G C+   I
Sbjct: 601 LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 660

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
             A    D +       DV  Y+ +IDG+ K  ++  A  L+ +L+E  +SP+ + +NS+
Sbjct: 661 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 720

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I GF     +  A      +    +     TYTT ++   +EG +     L  EM +K I
Sbjct: 721 ISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 780

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  +T+ V++ GLC + +L+ A ++LE+M    +TP  + YNT+I  + +  +L++AF 
Sbjct: 781 VPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFT 840

Query: 505 LLNQMWLHNLEPTSATYNILIDG 527
           L ++M    L P   TY+ILI+G
Sbjct: 841 LHDEMLDRGLVPDDVTYDILING 863



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/547 (23%), Positives = 251/547 (45%), Gaps = 21/547 (3%)

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
            N +++ Y +    E A   F  M+   + P     NIL+  L     + E  +  N M 
Sbjct: 193 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 252

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
             G+  D  T  ++ +      ++  A +  ++   +G   D   Y+++I   C+  N  
Sbjct: 253 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 312

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
            GL+L E M  +G+  +   ++ ++ +    G + EAL L  EM   G   +LV  + L+
Sbjct: 313 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 372

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
           +G C Q  +  A+ L+N++    + PN   +  ++ G C    I +A   +  + ++   
Sbjct: 373 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 432

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
             V   N ++ GY+K     EA +L+ + ++  ++ +I T+N ++   CK GK+ +A  L
Sbjct: 433 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSL 491

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           LD +   G+ P+ V+Y   +  +C +GN+    ++  +M  + + P  VTY+++I G  K
Sbjct: 492 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 551

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
           +   ++A+ L + M  + + P   T+NTII   CK   + +A   L         P+  T
Sbjct: 552 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 611

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           YN ++DG    G++ +A  +   + E  +S   V YT++I   C    +  A+    +M 
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 671

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           EKG E+ +  Y+                     ++  F +  D+ S  +L   +++ GL 
Sbjct: 672 EKGLELDVTAYS--------------------ALIDGFCKRRDMESAQDLFFELLEVGLS 711

Query: 641 PDKFLIN 647
           P++ + N
Sbjct: 712 PNRIVYN 718



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 193/398 (48%), Gaps = 12/398 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRH-----TDIMWDLYDDIKVSETPRN 62
           + G + +A  ++  M    +  ++ +YN ++  L H      D+   ++ D+   +   N
Sbjct: 481 KGGKMDEACSLLDNMVNQGMVPNVVSYNDMI--LGHCRKGNMDMASSVFSDMLARDLKPN 538

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T SI+IDG  ++   + A+    +       P+  + N I++  CK+G    A+    
Sbjct: 539 VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLK 598

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             L+ G  P   +YN ++ G    G+++ AL    +M   GV P+ +TY+ L  GF   +
Sbjct: 599 NFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN 658

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +I  A K   ++  KG + D+  Y+ LI G+C+  ++E    L   +L  G   N I Y+
Sbjct: 659 RIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYN 718

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++S       ++ AL    +M    +  DL TY+ LI GL K+ ++  A  LY EM SK
Sbjct: 719 SMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSK 778

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I P+      ++ GLC K  +  AR   + +   N    V++YN +I GY + GN+ EA
Sbjct: 779 GIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEA 838

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
             L+ +++++ + P  VT++ LI     NGK    R L
Sbjct: 839 FTLHDEMLDRGLVPDDVTYDILI-----NGKFKGDRSL 871



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/431 (21%), Positives = 181/431 (41%), Gaps = 38/431 (8%)

Query: 214 CQIGNVEEGLK-LREVMLSQGFKLNVIAYSVLLSSMCKSGRID-EALGLLYEMEAVGLKP 271
           C + + +  L+  +     +GF   V AY VLL  + +S      A  LL    +    P
Sbjct: 109 CHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSDP 168

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
             V +   +    K+       +++N + +  I  N                I  A   F
Sbjct: 169 SPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANR---------------IENAIDCF 213

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           +++I  + I  V   NI++   V+   IGE   LY +++ + I     T + ++    K 
Sbjct: 214 NAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKE 273

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G+V +A       K  G++  A  Y+  + A C++ N    L LL+EM+ +   P+  T+
Sbjct: 274 GRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATF 333

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           T VI     Q  + EA++L E+M   G   + +   ++++ +C   +L  A  L N++  
Sbjct: 334 TSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITE 393

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             L P   TY++LI+G C +G+++ A  L   ++ + I  +     ++++ +       +
Sbjct: 394 DGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEE 453

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           A   F + V+ G                ++N F        +M+    +GG +     L 
Sbjct: 454 ASKLFDEAVDCG----------------VANIF-----TYNIMMSWLCKGGKMDEACSLL 492

Query: 632 AVMIKSGLLPD 642
             M+  G++P+
Sbjct: 493 DNMVNQGMVPN 503


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 159/566 (28%), Positives = 277/566 (48%), Gaps = 16/566 (2%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +  DA+   ++       P+V+  N + S   K    E+   L   M   G+    ++ +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           I+I+  C    +  A      + + G EPD + ++ L  G  L  ++S A +++ +++  
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  P ++T   L+ G C  G V + + L + M+  GF+ N + Y  +L+ MCKSG+   A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           + LL +ME   +K D V YSI+I GLCK   +  A  L+NEM  K    +   +  ++ G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
            C      +       +I      +VV ++++ID +VK G + EA QL ++++++ I+P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            +T+NSLI GFCK  ++ +A +++D +   G +P  +T+   +N YC+   I   L L +
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM  + +    VTY  +++G C+  KL+ A +L ++M    V PD ++Y  ++   C   
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
           +L KA ++  ++    +E     Y I+I G+C    + +A  L  SL    + L   AY 
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIR------DYTKS--FFCMMLSN 602
            +I   C +  + KA   F +M E+G       + I IR      D T +      M S+
Sbjct: 548 IMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSS 607

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVF 628
           GFP D    + M+I     G+L   F
Sbjct: 608 GFPADVSTVK-MVINMLSSGELDKSF 632



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 266/561 (47%), Gaps = 2/561 (0%)

Query: 43  HTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLN 102
             D   DL+ D+  S     V   + +   + +  + +  +   ++   K    S+ +L+
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
            +++ +C+      A      ++K G  PD   +N L++GLC+   + EALE  + M   
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G +P  IT + L  G  L  ++S A  +I +++  G  P+ VTY  ++   C+ G     
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           ++L   M  +  KL+ + YS+++  +CK G +D A  L  EME  G K D++TY+ LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
            C   +     +L  +M  ++ISPN      ++    ++  + EA      ++      +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
            + YN +IDG+ K   + EA+Q+   +I K   P I+TFN LI G+CK  ++ D   L  
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            + L G+  + VTY T +  +C+ G ++    L QEM ++ + P  V+Y +++ GLC   
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           +L++A+++   +    +  D   Y  II   C    +  A+ L   + L  ++  +  YN
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           I+I  LC    L  AD L   + E   +  ++ Y  +I+AH  + D   A     +M   
Sbjct: 548 IMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSS 607

Query: 583 GFEISIRDYTKSFFCMMLSNG 603
           GF   +   T      MLS+G
Sbjct: 608 GFPADVS--TVKMVINMLSSG 626



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 211/416 (50%), Gaps = 3/416 (0%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYT 65
            G V DAV +I +M E   + +  TY  +L  +     T +  +L   ++      +   
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            SI+IDGLC+   L +A     E   K F   +++ N ++  +C  G  +    L   M+
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K  + P+  ++++LI      G + EA +   +M + G+ P+ ITY+ L  GF   +++ 
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A +++  ++ KG DPDI+T+ +LI GYC+   +++GL+L   M  +G   N + Y+ L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              C+SG+++ A  L  EM +  ++PD+V+Y IL+ GLC   ++ KA++++ ++   ++ 
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
            +   +  I+ G+C    + +A   F SL +     D   YNIMI    +  ++ +A  L
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           +R++ E+  +P  +T+N LI     +     A  L++ +K  G      T    +N
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 210/442 (47%), Gaps = 20/442 (4%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P ++ +  L     +    E  L L + M S+G   ++   S++++  C+  ++  A   
Sbjct: 86  PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           + ++  +G +PD V ++ L+ GLC + +V +A++L + M      P       ++ GLC 
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              +++A +  D ++ +    + V Y  +++   K G    A++L R++ E+ I    V 
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           ++ +I G CK+G + +A  L + +++ G +   +TY T +  +C  G       LL++M 
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            + I P  VT++V+I    K+ KL+EA QLL++M   G+ P+ ITYN++I  FCK   L 
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +A Q+++ M     +P   T+NILI+G C    + +   L   +    +    V Y T++
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
           +  C  G +  A   F +MV +     I  Y                    +++L     
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY--------------------KILLDGLCD 485

Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
            G+L    E+   + KS +  D
Sbjct: 486 NGELEKALEIFGKIEKSKMELD 507



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 192/419 (45%), Gaps = 15/419 (3%)

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           ++Y   LSS     + D+A+ L  +M      P ++ ++ L   + K  +    + L  +
Sbjct: 54  LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M SK I+ + +    ++   C    ++ A      ++      D V++N +++G      
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EA++L  +++E    P+++T N+L+ G C NGKV+DA  L+D +   G +P+ VTY  
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +N  C+ G     + LL++ME + I    V Y+++I GLCK   L  A  L  +M + G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
              D ITYNT+I  FC         +LL  M    + P   T+++LID     G L+ AD
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDY 591
            LL  + +  I+   + Y ++I   C E  + +A+     M+ KG       F I I  Y
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413

Query: 592 TKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            K+         F  M   G   +      ++  F Q G L    +L   M+   + PD
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 201/384 (52%), Gaps = 3/384 (0%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
           V  ++G    A+ ++ KM+E ++K+    Y+ ++  L      D  ++L++++++     
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T + +I G C   R  D    L++   ++  P+VV+ + ++  + K G    A  L 
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M++ G+ P+  +YN LI G C    +EEA++  + M   G +PD +T++IL  G+   
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           ++I    ++ +++ ++G   + VTY  L+ G+CQ G +E   KL + M+S+  + ++++Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            +LL  +C +G +++AL +  ++E   ++ D+  Y I+I G+C   KV  A  L+  +  
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K +  ++ A+  ++  LC K+ +++A + F  +       D + YNI+I  ++   +   
Sbjct: 537 KGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATT 596

Query: 362 AVQLYRQLIEKRISPSIVTFNSLI 385
           A +L  ++        + T   +I
Sbjct: 597 AAELIEEMKSSGFPADVSTVKMVI 620


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 179/648 (27%), Positives = 286/648 (44%), Gaps = 80/648 (12%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           +++A+  L+E       P VV+ N +++  CK    + A  LF  M   G  P   SYN 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           +I GL     M+EA +F N M  +G EPD I ++ L  GF    Q      ++ + L K 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL-KR 119

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD+  YT +I GYC+ G+++ G K+ E ML+ G   +  AY VL+  +CK GR+DEA 
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L   M   G   D VT+  LI  L    K+ +A +LY EM  +   P      +++  L
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C+   + EA   + +++        V YN ++DGY KLG + + ++L  Q++E    P I
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN------------AYCEE 426
            T+N L+ GF +  ++ DA  L   +  +G +P+A TYTT +             A+ +E
Sbjct: 300 QTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE 359

Query: 427 G-----------------NIQRLLALLQEMETKAIGPTHVTY------------------ 451
                              I     L ++++T    P  V Y                  
Sbjct: 360 ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLK 419

Query: 452 -----------------TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
                            TVVI GLCK   L +A ++ E M   G  PD ITY T+I  F 
Sbjct: 420 NFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFS 479

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K   + +A +LL+ M     EPT+ TY  ++ G C    +  A  ++  ++E        
Sbjct: 480 KASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLF 539

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMM 599
            +T+++  + ++G   +A     +M  +G    +  YT               +  F  M
Sbjct: 540 IFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM 599

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +  G  PD      ++  F + G++ +  E+  +M KSG+ PD F  N
Sbjct: 600 IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYN 647



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 277/582 (47%), Gaps = 13/582 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSET---PRN 62
           Y + G V D + ++ +M E D    IQTYN L+      + + D  +  K+  +     N
Sbjct: 274 YCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPN 333

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +I GL    R+++A  F  E         V+S   ++         + A  LF 
Sbjct: 334 AATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRIDEACELFE 387

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   G  P+  +Y  +I GL  AG +E+ L+   DM      P   TY+++  G     
Sbjct: 388 KLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQ 447

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A KV ++++ KG  PD +TYT LI G+ +   ++E  KL +VML++G +   + Y 
Sbjct: 448 MLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYG 507

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++   CK   I+EA  ++ +M   G +P L  ++ L+     + +  +A Q+  EM ++
Sbjct: 508 SIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTAR 567

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             +P+   + +++  L     + EAR  FDS+I   C  D + Y  +I  + K+GN+  A
Sbjct: 568 GCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAA 627

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            ++   + +  + P    +NSL+ G+ K  +V  A  + D +   G++P+AVT+   M+ 
Sbjct: 628 GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHG 687

Query: 423 YCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             ++G   R  +L +EM E   + PT V+YT++I GL K  ++ EA    ++M   G+ P
Sbjct: 688 LFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIP 747

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +  TY ++I S  K   + +A +L+  M    + P    Y+ LI GL  +  +  A  + 
Sbjct: 748 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVF 807

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEG---DVHKAMTFFCQMV 580
             + +   +  +V Y  + +   A G   D+      F Q V
Sbjct: 808 QEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGV 849



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 157/635 (24%), Positives = 294/635 (46%), Gaps = 25/635 (3%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNV 63
           S  G + +A  +  +M E   +  ++  +SL++ L      D   ++Y  +   +   + 
Sbjct: 205 SNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSR 264

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
              + ++DG C+  R+ D +  L +    +  P + + N +++ + +    + A  LF L
Sbjct: 265 VAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKL 324

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +  YG  P+A +Y  +I GL  A  MEEA  F ++        D I+Y+ + KG     +
Sbjct: 325 LSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEA------LDVISYTTVIKGLADSKR 378

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I  A ++ +KL   G  P++V YT +I G  + G +E+GLK  E M           Y+V
Sbjct: 379 IDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTV 438

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++  +CK+  + +A  +  +M   G  PD +TY+ LI G  K  K+ +A +L + M +K 
Sbjct: 439 VIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 498

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P +  +G+I+ G C+ +MI EA+     +    C   + ++  ++  Y+  G   EA 
Sbjct: 499 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAY 558

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           Q+  ++  +  +P ++ + SLI      G+V +AR + D++   G  P A+TY T +  +
Sbjct: 559 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 618

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            + GN++    +L+ M    +GP    Y  ++ G  K  ++ +A  + + M   G+ P+ 
Sbjct: 619 SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNA 678

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHN-LEPTSATYNILIDGLCVNGDLKNADCLLV 542
           +T+N ++    K     +AF L  +M   + + PT  +Y ILIDGL   G +  A     
Sbjct: 679 VTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQ 738

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--------- 593
            + +  I      YT++I +    G + +A      MV+ G    ++ Y+          
Sbjct: 739 EMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSS 798

Query: 594 ------SFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
                   F  M+  G  P++   +V+   F   G
Sbjct: 799 MVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 833



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 146/614 (23%), Positives = 285/614 (46%), Gaps = 42/614 (6%)

Query: 38  LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPS 97
           L  L   D  ++L++ ++ S    +  T   +I+ L    +L +A    +E   + + P 
Sbjct: 169 LCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPY 228

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           +   ++++   CK G  + A  ++  ++   +     +YN L+ G C  G +++ L+   
Sbjct: 229 LEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLL 288

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            M      PD  TY+IL  GF   +++  A ++ + L   G  P+  TYT +I G     
Sbjct: 289 QMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQ 348

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            +EE     +        L+VI+Y+ ++  +  S RIDEA  L  +++  G  P++V Y+
Sbjct: 349 RMEEAKAFFDE------ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYT 402

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            +I GL K  ++   ++ + +M      P    +  ++ GLC+ +M+ +A   F+ ++  
Sbjct: 403 AVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQK 462

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
            C+ D + Y  +IDG+ K   + EA +L   ++ K   P+ VT+ S+++GFCK   + +A
Sbjct: 463 GCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEA 522

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
           + ++  ++  G EP    +T+ ++ Y  +G  +    +L EM  +   P  + YT +I  
Sbjct: 523 KEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDL 582

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR----------------- 500
           L    ++ EA  + + M   G  PD +TY TII++F K  ++                  
Sbjct: 583 LFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 642

Query: 501 ------------------KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
                             +AF + ++M    ++P + T+N+L+ GL  +G    A  L  
Sbjct: 643 CFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFK 702

Query: 543 S-LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
             L++  +  T V+YT +I      G V +A + F +M+++G       YT   + +  +
Sbjct: 703 EMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKA 762

Query: 602 NGFPPDQEICEVML 615
              P  +++ E M+
Sbjct: 763 GRIPEAKKLVEDMV 776


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 163/598 (27%), Positives = 280/598 (46%), Gaps = 19/598 (3%)

Query: 69  VIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++ GLC   R+ +A+ + L+  +     P+VVS N ++  +C    AE A  L  +M   
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195

Query: 128 GLH---PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            +    P+  SYN +I+G    G +++A     DM   G+ P+ +TY+I+  G      +
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  V Q+++ KG  P+IVTYT LI GY  IG  +E +++ + M + G + +   Y +L
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L  +CK G+  EA  L   M   G+KPD+  Y I++ G   +  + +     + M    I
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGI 375

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SPN +    +     +K MI EA   F+ +       +VV Y  +ID   KLG + +A  
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
            + Q+I + ++P+IV F SL+YG C   K   A  L   +   G+ P+ V + T M   C
Sbjct: 436 KFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLC 495

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
            EG + +   L+  ME     P  ++Y  +I+G C   K  EA +LL+ M  +G+ P++ 
Sbjct: 496 TEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNEC 555

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TYNT++  +C+   +  A+ +  +M  + + P   TYN ++ GL        A  L +++
Sbjct: 556 TYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNM 615

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI---------------R 589
                  +   Y  I+        V +A+  F  +  K  ++ I               +
Sbjct: 616 ITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRK 675

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +   + F  + +NG  PD     ++     + G L     + + M KSG  P+  ++N
Sbjct: 676 EDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLN 733



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 151/572 (26%), Positives = 275/572 (48%), Gaps = 6/572 (1%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLY--DDIKVSETPRNVYTNSIVID 71
           ++ +M EL    ++ +YN+LL       R  + +  L+   D +V   P N+ + + VI+
Sbjct: 153 LLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN 212

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           G   + ++  A     +   +   P+VV+   ++   CK    + A+G+F  M+  G+ P
Sbjct: 213 GFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRP 272

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           +  +Y  LIHG    G  +E +    +M  HG+EPD  TY +L        + + A K+ 
Sbjct: 273 NIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLF 332

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             ++ KG  PD+  Y +++ GY   G + E     ++M+  G   N   ++++  +  K 
Sbjct: 333 DSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKK 392

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
             I EA+ +  +M   GL P++V Y+ LI  LCK  +V  A   +N+M ++ ++PN    
Sbjct: 393 AMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVF 452

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
            +++ GLC  +   +A   F  ++      +VV +N ++      G + +A +L   +  
Sbjct: 453 TSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMER 512

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
               P I+++N+LI G C  GK  +A +LLD +   GL+P+  TY T ++ YC +G I  
Sbjct: 513 VGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDD 572

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
             ++ QEM +  I P  VTY  ++ GL K  +  EA +L  +M   G      TYN I+ 
Sbjct: 573 AYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILN 632

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
              K   + +A ++   +   +L+    T+NI+I  L  +G  ++A  L  ++  + +  
Sbjct: 633 GLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVP 692

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
               Y  I +    EG + +    F +M + G
Sbjct: 693 DVTTYRLIAENLIEEGSLEEFDGMFSEMEKSG 724



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 144/559 (25%), Positives = 271/559 (48%), Gaps = 2/559 (0%)

Query: 29  VSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
           VS  T  +  +     D  ++L+ D+     P NV T +IVIDGLC+   +  A    Q+
Sbjct: 205 VSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQ 264

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLG-FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
              K   P++V+   ++  Y  +G + EV + +   M  +GL PD F+Y +L+  LC  G
Sbjct: 265 MIDKGVRPNIVTYTCLIHGYLSIGQWKEVVR-MLKEMSAHGLEPDCFTYGLLLDYLCKKG 323

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
              EA +  + M R G++PD   Y I+  G+     +S     +  ++  G  P+   + 
Sbjct: 324 KCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFN 383

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           ++ C + +   + E + +   M  QG   NV+ Y+ L+ ++CK GR+D+A     +M   
Sbjct: 384 IVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINE 443

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G+ P++V ++ L+ GLC  DK  KA +L+ EM ++ I PN      I+  LC +  + +A
Sbjct: 444 GVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKA 503

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           +   D +       D++ YN +I G+  +G   EA +L   ++   + P+  T+N+L++G
Sbjct: 504 QRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHG 563

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           +C++G++ DA  +   +  +G+ P  VTY T ++   +         L   M T     +
Sbjct: 564 YCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWS 623

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TY +++ GL K   + EA+++ + +    +  D IT+N +I +  K      A  L  
Sbjct: 624 IYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFA 683

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            +  + L P   TY ++ + L   G L+  D +   +++   +   +    +++     G
Sbjct: 684 TISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRG 743

Query: 568 DVHKAMTFFCQMVEKGFEI 586
           D+ +A  +  ++ EK F +
Sbjct: 744 DISRAGAYLSKIDEKNFSL 762



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 259/531 (48%), Gaps = 5/531 (0%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LHPDAFSYNILIHGLCIAGSMEEAL 153
            P V + + ++  +C++G  E     F L+LK G    D    N L+ GLC A  + EA+
Sbjct: 91  APDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAM 150

Query: 154 E-FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL---IKGSDPDIVTYTVL 209
                 M   G  P+ ++Y+ L KGF   ++   A +++  +    ++   P++V+Y  +
Sbjct: 151 GVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTV 210

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G+   G V++   L   M  QG   NV+ Y++++  +CK+  +D A G+  +M   G+
Sbjct: 211 INGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGV 270

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           +P++VTY+ LI G     +  + +++  EM +  + P+ F +G +L  LC+K   TEAR 
Sbjct: 271 RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARK 330

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
            FDS+I      DV +Y I++ GY   G + E       ++   ISP+   FN +   F 
Sbjct: 331 LFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFA 390

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K   + +A  + + ++  GL P+ V Y T ++A C+ G +        +M  + + P  V
Sbjct: 391 KKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIV 450

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            +T ++ GLC   K ++A +L  +M   G+ P+ + +NTI+ + C    + KA +L++ M
Sbjct: 451 VFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLM 510

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
                 P   +YN LI G C+ G    A  LL  +    +   +  Y T++  +C +G +
Sbjct: 511 ERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRI 570

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
             A + F +M+  G    +  Y      +  +  F   +E+   M+ +  Q
Sbjct: 571 DDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQ 621



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 202/490 (41%), Gaps = 66/490 (13%)

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR---------IDEALGLLYEMEAVG 268
           +V++ LKL +  L      ++IA++ LL+++  + R         +      +       
Sbjct: 30  SVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDCCSK 89

Query: 269 LKPDLVTYSILI------------------------------------RGLCKQDKVHKA 292
           + PD+ TYSIL+                                    +GLC   +V +A
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 293 IQ-LYNEMCSKRISPNSFAHGAILLGLCEKEMITEA----RMYFDSLIMSNCIQDVVLYN 347
           +  L   M     +PN  ++  +L G C++    EA     M  D  + S C  ++V YN
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRS-CPPNLVSYN 208

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I+G+   G + +A  L+  + ++ I P++VT+  +I G CK   V  A  +   +   
Sbjct: 209 TVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK 268

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G+ P+ VTYT  ++ Y   G  + ++ +L+EM    + P   TY +++  LCK+ K  EA
Sbjct: 269 GVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEA 328

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            +L + M   G+ PD   Y  I+  +     L +    L+ M  + + P    +NI+   
Sbjct: 329 RKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCA 388

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
                 +  A  +   +++  +S   V Y T+I A C  G V  A   F QM+ +G   +
Sbjct: 389 FAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPN 448

Query: 588 IRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
           I  +T                  F  M++ G  P+      ++      G +     L  
Sbjct: 449 IVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLID 508

Query: 633 VMIKSGLLPD 642
           +M + G  PD
Sbjct: 509 LMERVGTRPD 518



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 3/208 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y R G + DA  V  +M    +   + TYN++L+ L   R      +LY ++  S    +
Sbjct: 564 YCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWS 623

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           +YT +I+++GL + + + +A+   Q    K+    +++ N ++    K G  E A  LF 
Sbjct: 624 IYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFA 683

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   GL PD  +Y ++   L   GS+EE     ++M + G  P+++  + L +   L  
Sbjct: 684 TISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRG 743

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            IS A   + K+  K    +  T ++LI
Sbjct: 744 DISRAGAYLSKIDEKNFSLEASTTSMLI 771


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 160/607 (26%), Positives = 288/607 (47%), Gaps = 14/607 (2%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           ++  +  NV   +++I GLC+  R+ +A+        K    S V+   ++   CK+   
Sbjct: 253 RMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEF 312

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           EV  G+   M++ G  P   + + L+ GL   G + +A +  N + + G  P    Y+ L
Sbjct: 313 EVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNAL 372

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
                   +   A  + +++  KG   + VTY++LI  +C+ G ++  +     M+  G 
Sbjct: 373 INSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGI 432

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           K+ V  Y+ L++  CK G +  A+    EM   GLKP +V+Y+ LI G C + K+H+A +
Sbjct: 433 KITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFR 492

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           LY+EM  K I+PN++    ++  L     +T+A   FD ++  N + + V YN+MI+G+ 
Sbjct: 493 LYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHC 552

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K GN  +A +L  Q+++K + P   T+  LI   C  G+V +A++ +D +     + + +
Sbjct: 553 KEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEM 612

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            Y+  ++ YC+EG ++  L + +EM  + +    V Y V+I G  K+        LL++M
Sbjct: 613 CYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNM 672

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
           +   + PD++ Y ++I  + K   ++KAF + + M      P   TY  LI+ LC  G +
Sbjct: 673 HDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLM 732

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK------GFEISI 588
             A+ L   +   N +   V Y   +     EG + KA+     M++        + I +
Sbjct: 733 DKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILV 792

Query: 589 RDYTK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           R + K             M+ N   PD      ++    + G+L    E    M+  GL 
Sbjct: 793 RGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLK 852

Query: 641 PDKFLIN 647
           PD    N
Sbjct: 853 PDTLAYN 859



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 153/570 (26%), Positives = 282/570 (49%), Gaps = 6/570 (1%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDI----KVSETPRNVYTNSIVIDGL 73
           V+ +M EL    +    +SL+  LR    + D +D +    KV   P +++  + +I+ L
Sbjct: 318 VMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMP-SLFVYNALINSL 376

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           C+  +  +A L  +E   K    + V+ + ++  +C+ G  + A      M+  G+    
Sbjct: 377 CKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITV 436

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
           + YN LI+G C  G++  A+ F ++M   G++P  ++Y+ L  G+    ++  A+++  +
Sbjct: 437 YPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHE 496

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +  KG  P+  T+T LI    +   + +  +L + ML Q    N + Y+V++   CK G 
Sbjct: 497 MTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGN 556

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
             +A  LL +M   GL PD  TY  LI  LC   +V +A +  +++  +    N   + A
Sbjct: 557 TVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSA 616

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           +L G C++  + +A      ++      D+V Y ++IDG +K  +      L + + ++R
Sbjct: 617 LLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQR 676

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           + P  V + S+I G+ K G V  A  + D +   G  P+ VTYTT +N  C+ G + +  
Sbjct: 677 LRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAE 736

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            L +EM      P HVTY   +  L ++  +++AVQL  DM + G+  + ++YN ++R F
Sbjct: 737 LLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVSYNILVRGF 795

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           CK   + +A +LL++M  + + P   TY+ +I   C  G+L  A     ++    +    
Sbjct: 796 CKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDT 855

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +AY  +I   C  G++ KA      M+ +G
Sbjct: 856 LAYNFLIYGCCIAGELGKAFELRDDMIRRG 885



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 154/559 (27%), Positives = 269/559 (48%), Gaps = 41/559 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNV 63
           R G V DA  ++ ++K++    S+  YN+L+ +L   D  +D    L+ ++       N 
Sbjct: 343 RKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSL-CKDGKFDEAELLFKEMGEKGLCAND 401

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T SI+ID  C++ +L  AI FL +        +V   N++++ +CKLG    A   F  
Sbjct: 402 VTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDE 461

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  GL P   SY  LI G C  G + EA    ++M   G+ P+  T++ L       ++
Sbjct: 462 MIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANR 521

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG---------- 233
           ++ A+++  ++L +   P+ VTY V+I G+C+ GN  +  +L   M+ +G          
Sbjct: 522 MTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRP 581

Query: 234 -------------------------FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
                                    FKLN + YS LL   CK GR+ +ALG+  EM   G
Sbjct: 582 LISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRG 641

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           +  DLV Y++LI G  K+        L   M  +R+ P+   + +++ G  +   + +A 
Sbjct: 642 VDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAF 701

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             +D +I   C  ++V Y  +I+   K G + +A  L+++++    +P+ VT+   +   
Sbjct: 702 GIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHL 761

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            + G +  A +L + + L GL  + V+Y   +  +C+ G ++    LL EM   AI P  
Sbjct: 762 AREGSMEKAVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDC 820

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           +TY+ +I   C++  L  A++  + M   G+ PD + YN +I   C   +L KAF+L + 
Sbjct: 821 ITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDD 880

Query: 509 MWLHNLEPTSATYNILIDG 527
           M    ++P  AT+  L  G
Sbjct: 881 MIRRGVKPNQATHKSLSHG 899



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 240/527 (45%), Gaps = 52/527 (9%)

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           P   T   +  G   + ++     +  ++L  G  PDI  Y  +I  +C++ N  +  ++
Sbjct: 191 PQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEM 250

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL--------------------------- 258
            + M S    LNV+ Y+VL+  +CK+ R+ EA+                           
Sbjct: 251 IQRMESS--DLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCK 308

Query: 259 --------GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
                   G++ EM  +G  P     S L+ GL ++ KV  A  L N +      P+ F 
Sbjct: 309 VQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFV 368

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + A++  LC+     EA + F  +       + V Y+I+ID + + G +  A+    ++I
Sbjct: 369 YNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMI 428

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
              I  ++  +NSLI G CK G ++ A    D +   GL+P+ V+YT+ ++ YC +G + 
Sbjct: 429 MAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLH 488

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L  EM  K I P   T+T +I  L +  ++ +A +L ++M    + P+++TYN +I
Sbjct: 489 EAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMI 548

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CK  +  KAF+LLNQM    L P + TY  LI  LC  G +  A   +  L   +  
Sbjct: 549 EGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFK 608

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY------------TKSFFCM 598
           L ++ Y+ ++  +C EG +  A+    +MV++G ++ +  Y            T + F +
Sbjct: 609 LNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGL 668

Query: 599 ---MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              M      PD+ I   M+  + + G +   F +  +MI  G  P+
Sbjct: 669 LKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPN 715



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 3/260 (1%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +++IDG  ++         L+    +   P  V   +++  Y K G  + A G++ +M+ 
Sbjct: 650 AVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMID 709

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  P+  +Y  LI+ LC AG M++A     +M      P+ +TY       HL  + S 
Sbjct: 710 EGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLD--HLAREGSM 767

Query: 187 AWKV-IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
              V +   ++KG   + V+Y +L+ G+C++G VEE  KL + M+      + I YS ++
Sbjct: 768 EKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTII 827

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              C+ G +D A+     M   GLKPD + Y+ LI G C   ++ KA +L ++M  + + 
Sbjct: 828 YQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVK 887

Query: 306 PNSFAHGAILLGLCEKEMIT 325
           PN   H ++  G   K  I+
Sbjct: 888 PNQATHKSLSHGASRKFSIS 907



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 146/349 (41%), Gaps = 52/349 (14%)

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           ++++I  YV+   + ++V ++R + +  + P + T   ++ G  K  +V     L   I 
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEIL 220

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             G+ P    Y   + ++CE  N  +   ++Q ME+  +    V Y V+I GLCK  ++ 
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNV--VVYNVLIHGLCKNKRVW 278

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD--------------------------- 498
           EAV++   +   G+T  ++TY T++   CK ++                           
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338

Query: 499 --LRK------AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             LR+      AF L+N++      P+   YN LI+ LC +G    A+ L   + E  + 
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLC 398

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SF 595
              V Y+ +I + C  G +  A+ F  +M+  G +I++  Y                 SF
Sbjct: 399 ANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSF 458

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           F  M+  G  P       ++  +   G L   F L   M   G+ P+ +
Sbjct: 459 FDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTY 507



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 121/296 (40%), Gaps = 40/296 (13%)

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-LEP----------------- 411
           + K  + S ++F  LI+          A  LL T+ L G L+P                 
Sbjct: 97  LHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALLDCFEKCDFI 156

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           S++ +   + +Y +E  +   + + + M    + P   T   V+ GL K  ++   + L 
Sbjct: 157 SSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLF 216

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            ++  +G+ PD   Y  +IRSFC+ K+  KA +++ +M   +L      YN+LI GLC N
Sbjct: 217 GEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKN 274

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
             +  A  +   L +  ++ ++V Y T++   C   +         +M+E          
Sbjct: 275 KRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIEL--------- 325

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                      GF P +     ++    + G +   F+L   + K G +P  F+ N
Sbjct: 326 -----------GFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYN 370


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 139/453 (30%), Positives = 245/453 (54%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P  F +  ++  L  +      +     M  +G+  D +  SIL   F  L Q   ++ V
Sbjct: 70  PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           + K+L  G +P+++T T LI G C  G + + L+  + +++ GF LN ++Y  L++ +CK
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G+   AL LL  ++   ++P++V Y+ +I  +CK   V++A  LY+EM SK ISP+   
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + A++ G C    + +A   F+ +I  N   +V  +NI++DG+ K   + EA  +   ++
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           ++ I P + T+NSL+  +C   +V  A+ + +TI   G+ P+  +Y+  ++ +C+   + 
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVD 369

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             + L +EM    I P  VTY  +I GLCK  K+  A++L+++M+  GV  D+ITYN+I+
Sbjct: 370 EAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
            + CK   + KA  LL +M    ++P   TY  L+DGLC NG L++A  +   L      
Sbjct: 430 DALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L    YT +I+  C+ G   +++    +M E G
Sbjct: 490 LDVNIYTAMIQGFCSHGLFDESLDLLSKMEENG 522



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 236/428 (55%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           +V L+ +++ + +LG   ++  +   +LK G  P+  +   LI GLC+ G + +AL+F +
Sbjct: 107 LVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHD 166

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            +   G   + ++Y  L  G   + Q S A ++++++  K   P++V Y  +I   C++ 
Sbjct: 167 KVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVK 226

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            V E   L   M+S+G   +V+ Y+ L+S  C  G++ +A  L  +M    + P++ T++
Sbjct: 227 LVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFN 286

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           IL+ G CK+ ++ +A  +   M  + I P+ F + +++   C  + + +A+  F+++   
Sbjct: 287 ILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQR 346

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
               ++  Y+IMI G+ K+  + EA+ L++++    I P +VT+NSLI G CK GK++ A
Sbjct: 347 GVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYA 406

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
            +L+D +   G+    +TY + ++A C+   + + +ALL +M+ + I P   TYT ++ G
Sbjct: 407 LKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDG 466

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LCK  +L++A  + ED+ V G   D   Y  +I+ FC      ++  LL++M  +   P 
Sbjct: 467 LCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPN 526

Query: 518 SATYNILI 525
           + TY I+I
Sbjct: 527 AVTYEIII 534



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 229/464 (49%), Gaps = 15/464 (3%)

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           +++   G   D+V  ++LI  + Q+G       +   +L  G++ NVI  + L+  +C  
Sbjct: 96  RQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLK 155

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G+I +AL    ++ A+G   + V+Y  LI GLCK  +   A+QL   +  K + PN   +
Sbjct: 156 GQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMY 215

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             I+  +C+ +++ EA   +  ++      DVV YN +I G+  +G + +A  L+ ++I 
Sbjct: 216 NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIF 275

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           + I+P++ TFN L+ GFCK  ++ +A+ +L  +   G++P   TY + M+ YC    + +
Sbjct: 276 ENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNK 335

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              +   +  + + P   +Y+++I G CK  K+ EA+ L ++M+   + PD +TYN++I 
Sbjct: 336 AKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLID 395

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
             CK   +  A +L+++M    +     TYN ++D LC N  +  A  LL  +++  I  
Sbjct: 396 GLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP 455

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF--FC------------ 597
               YTT++   C  G +  A   F  ++ KG+ + +  YT     FC            
Sbjct: 456 DICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLL 515

Query: 598 -MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
             M  NG  P+    E+++ +     +     +L   MI  GL 
Sbjct: 516 SKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGLF 559



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 227/448 (50%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           SI+I+   Q  +   +   L +     + P+V++L  ++   C  G    A      ++ 
Sbjct: 111 SILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVA 170

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G H +  SY  LI+GLC  G    AL+    +    V+P+ + Y+ +      +  ++ 
Sbjct: 171 LGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNE 230

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A+ +  +++ KG  PD+VTY  LI G+C +G +++   L   M+ +    NV  +++L+ 
Sbjct: 231 AFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVD 290

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             CK  R+ EA  +L  M   G+KPD+ TY+ L+   C   +V+KA  ++N +  + ++P
Sbjct: 291 GFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNP 350

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N  ++  ++ G C+ + + EA   F  +  +N I DVV YN +IDG  KLG I  A++L 
Sbjct: 351 NIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLV 410

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++ ++ +    +T+NS++   CKN +V  A  LL  +K  G++P   TYTT ++  C+ 
Sbjct: 411 DEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKN 470

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G ++    + +++  K        YT +I+G C      E++ LL  M   G  P+ +TY
Sbjct: 471 GRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTY 530

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
             II S     +  KA +LL +M    L
Sbjct: 531 EIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 213/418 (50%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + +I GLC + ++  A+ F  +     F  + VS   +++  CK+G    A  L 
Sbjct: 141 NVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLL 200

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +    + P+   YN +I  +C    + EA +  ++M   G+ PD +TY+ L  GF ++
Sbjct: 201 RRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIV 260

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  +  K++ +  +P++ T+ +L+ G+C+   ++E   +  +M+ QG K +V  Y
Sbjct: 261 GKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTY 320

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C    +++A  +   +   G+ P++ +YSI+I G CK  KV +A+ L+ EM  
Sbjct: 321 NSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHC 380

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             I P+   + +++ GLC+   I+ A    D +       D + YN ++D   K   + +
Sbjct: 381 NNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDK 440

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ L  ++ ++ I P I T+ +L+ G CKNG++ DAR + + + + G       YT  + 
Sbjct: 441 AIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQ 500

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
            +C  G     L LL +ME     P  VTY ++I  L  + +  +A +LL +M   G+
Sbjct: 501 GFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 224/461 (48%), Gaps = 15/461 (3%)

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           K   P I  +  ++    +  +    + L   M   G   +++  S+L++   + G+   
Sbjct: 66  KNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPL 125

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           +  +L ++  +G +P+++T + LI+GLC + ++H+A+Q ++++ +     N  ++G ++ 
Sbjct: 126 SFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLIN 185

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           GLC+    + A      +       +VV+YN +ID   K+  + EA  LY +++ K ISP
Sbjct: 186 GLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP 245

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            +VT+N+LI GFC  GK+ DA  L + +    + P+  T+   ++ +C+E  ++    +L
Sbjct: 246 DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL 305

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
             M  + I P   TY  ++   C   ++ +A  +   +   GV P+  +Y+ +I  FCK 
Sbjct: 306 AMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKI 365

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
           K + +A  L  +M  +N+ P   TYN LIDGLC  G +  A  L+  + +  +   K+ Y
Sbjct: 366 KKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITY 425

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLS 601
            +I+ A C    V KA+    +M ++G +  I  YT               +  F  +L 
Sbjct: 426 NSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLV 485

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            G+  D  I   M+  F   G      +L + M ++G +P+
Sbjct: 486 KGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPN 526



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 205/403 (50%), Gaps = 3/403 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G +H A+    K+  L   ++  +Y +L+  L     T     L   +       NV   
Sbjct: 156 GQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMY 215

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +ID +C+   + +A     E   K   P VV+ NA++S +C +G  + A  LF  M+ 
Sbjct: 216 NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIF 275

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             ++P+ +++NIL+ G C    ++EA      M + G++PD  TY+ L   + L+ +++ 
Sbjct: 276 ENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNK 335

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  +   +  +G +P+I +Y+++I G+C+I  V+E + L + M       +V+ Y+ L+ 
Sbjct: 336 AKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLID 395

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CK G+I  AL L+ EM   G+  D +TY+ ++  LCK  +V KAI L  +M  + I P
Sbjct: 396 GLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP 455

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +  ++ GLC+   + +AR+ F+ L++   I DV +Y  MI G+   G   E++ L 
Sbjct: 456 DICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLL 515

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
            ++ E    P+ VT+  +I       +   A +LL  +   GL
Sbjct: 516 SKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 157/329 (47%), Gaps = 7/329 (2%)

Query: 287 DKVHKAIQLYNEMC-SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
           D  H  +  +N +   K   P+ F  G IL  L +    +        +  +    D+V+
Sbjct: 50  DNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVI 109

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
            +I+I+ + +LG    +  +  ++++    P+++T  +LI G C  G++  A +  D + 
Sbjct: 110 LSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV 169

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             G   + V+Y T +N  C+ G     L LL+ ++ K + P  V Y  +I  +CK   + 
Sbjct: 170 ALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 229

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA  L  +M   G++PD +TYN +I  FC    ++ A  L N+M   N+ P   T+NIL+
Sbjct: 230 EAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           DG C    LK A  +L  + +  I      Y +++  +C   +V+KA   F  + ++G  
Sbjct: 290 DGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVN 349

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
            +I  Y+      ++ +GF   +++ E M
Sbjct: 350 PNIHSYS------IMIHGFCKIKKVDEAM 372



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 121/281 (43%), Gaps = 20/281 (7%)

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           R L +K   PSI  F  ++    K+   +    L   ++ +G+    V  +  +N + + 
Sbjct: 61  RLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQL 120

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G      ++L ++      P  +T T +IKGLC + ++ +A+Q  + +  +G   ++++Y
Sbjct: 121 GQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSY 180

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
            T+I   CK      A QLL ++    ++P    YN +ID +C    +  A  L   +  
Sbjct: 181 GTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVS 240

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPP 606
             IS   V Y  +I   C  G +  A   F +M+ +    ++  +       +L +GF  
Sbjct: 241 KGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFN------ILVDGFCK 294

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           ++ + E                 + A+M+K G+ PD F  N
Sbjct: 295 ERRLKEAK--------------NVLAMMMKQGIKPDVFTYN 321


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 161/545 (29%), Positives = 269/545 (49%), Gaps = 20/545 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V S N ++ R  K     +A   F  M+  GL P  F+YN++I  L   G +E A   
Sbjct: 214 PKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSL 273

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M   G+ PD +TY+ L  G+  +  ++GA  V +++   G +PD++TY  LI  +C+
Sbjct: 274 FEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCK 333

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              + +  +    M  +G + NV+ YS L+ + CK+G + EA     +M  VGL+P+  T
Sbjct: 334 FERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFT 393

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI   CK   +++A +L +EM    ++ N   + A+L GLCE   + EA   F +L+
Sbjct: 394 YTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALL 453

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            +    +  +Y  +  GY+K   + +A+ +  ++ +K + P ++ + + I+G C+  ++ 
Sbjct: 454 KAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIE 513

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           D+  ++  +   GL  ++  YTT ++AY + G     + LLQEM+   I  T VTY V+I
Sbjct: 514 DSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLI 573

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLCK   +Q+AV+  + M   G+ P+ + Y  +I   CK   L +A  L N+M    + 
Sbjct: 574 DGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGIS 633

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P    Y  LIDG   +G+   A  L   + E  + L   AYT++I      G V  A   
Sbjct: 634 PDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLA--- 690

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
                            KS    ML  G  PDQ +C  +L  +++ GD+     L   M 
Sbjct: 691 -----------------KSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMA 733

Query: 636 KSGLL 640
           + GL+
Sbjct: 734 RRGLI 738



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 173/633 (27%), Positives = 285/633 (45%), Gaps = 24/633 (3%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPRNVYTN 66
           GM+ +A     KM +  +   +++ N LL+ L  +    +    + D+ V+    +V+T 
Sbjct: 195 GMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTY 254

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           ++VI  L ++  L+ A    +E   K   P +V+ N+++  Y K+G    A  +F  M  
Sbjct: 255 NMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKD 314

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD  +YN LI+  C    + +A E+ + M + G++P+ +TYS L   F     +  
Sbjct: 315 AGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLE 374

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A K    ++  G  P+  TYT LI   C+IG++ E  KL   M   G  LN++ Y+ LL 
Sbjct: 375 ANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLD 434

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C+ GR+ EA  L   +   G   +   Y+ L  G  K   + KA+ +  EM  K + P
Sbjct: 435 GLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKP 494

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +G  + GLC +  I ++      ++      +  +Y  +ID Y K+G   EAV L 
Sbjct: 495 DLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLL 554

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           +++ +  I  ++VT+  LI G CK G V  A R  D +  +GL+P+ + YT  ++  C+ 
Sbjct: 555 QEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKN 614

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
             ++    L  EM  K I P  + YT +I G  K     EA+ L   M  IG+  D   Y
Sbjct: 615 DCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAY 674

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA-----DCLL 541
            ++I  F +   ++ A  LL++M    + P       L+      GD+  A     D   
Sbjct: 675 TSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMAR 734

Query: 542 VSLQEHNISLT-KVAYTTIIKAH--CAE---GDVHKAMTFFCQMVEK----GFEISIRDY 591
             L    I +T     T + K H  CA     D H+    +   VE+    G   S   +
Sbjct: 735 RGLISGTIDITVPSCLTAVTKLHKLCASQSGTDFHRTANLYLADVEEFSHSGMPFSPLGH 794

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
            + F C+     + PD      M  + H G  L
Sbjct: 795 ARLFTCLEAEALYAPD------MCTSLHAGRRL 821



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 241/498 (48%), Gaps = 40/498 (8%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRNV 63
           +R G +  A  +  +MK   L+  I TYNSL+       ++     +++++K +    +V
Sbjct: 262 AREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDV 321

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +I+  C+  R+  A  +L     +   P+VV+ + ++  +CK G    A   F  
Sbjct: 322 ITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVD 381

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS----------- 172
           M++ GL P+ F+Y  LI   C  G + EA +  ++M + GV  + +TY+           
Sbjct: 382 MIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGR 441

Query: 173 ----------ILAKGFHLLSQI--------------SGAWKVIQKLLIKGSDPDIVTYTV 208
                     +L  G+ L  QI                A  +++++  K   PD++ Y  
Sbjct: 442 MREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGT 501

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
            I G C+   +E+ + +   M+  G   N   Y+ L+ +  K G+  EA+ LL EM+ +G
Sbjct: 502 KIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLG 561

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           +K  +VTY +LI GLCK   V +A++ ++ M    + PN   + A++ GLC+ + + EA+
Sbjct: 562 IKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAK 621

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             F+ ++      D ++Y  +IDG +K GN GEA+ L  +++E  +   +  + SLI+GF
Sbjct: 622 NLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGF 681

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI--GP 446
            + G+V  A+ LLD +   G+ P  V     +  Y E G+I   LAL  +M  + +  G 
Sbjct: 682 SRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGT 741

Query: 447 THVTYTVVIKGLCKQWKL 464
             +T    +  + K  KL
Sbjct: 742 IDITVPSCLTAVTKLHKL 759



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/536 (24%), Positives = 247/536 (46%), Gaps = 36/536 (6%)

Query: 145 IAGSMEEALEFTNDMG-RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD--- 200
           + G  + AL+F  + G R G    A +Y +LA           A  VI++ ++ G +   
Sbjct: 104 LKGDPKSALKFFKEAGARAGFRHAAESYCVLAHILFCGMFYLDARSVIKEWILLGREFPG 163

Query: 201 ---------------PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
                          P    +  L      +G +EE  +    M        V + + LL
Sbjct: 164 CDFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELL 223

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             + KS +   AL    +M   GL P + TY+++I  L ++  +  A  L+ EM +K + 
Sbjct: 224 HRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLR 283

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+   + +++ G  +  M+T A   F+ +  + C  DV+ YN +I+ + K   I +A + 
Sbjct: 284 PDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEY 343

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL-LDTIKLHGLEPSAVTYTTFMNAYC 424
              + ++ + P++VT+++LI  FCK G + +A +  +D I++ GL+P+  TYT+ ++A C
Sbjct: 344 LHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRV-GLQPNEFTYTSLIDANC 402

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G++     L  EM+   +    VTYT ++ GLC+  +++EA +L   +   G T +Q 
Sbjct: 403 KIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQ 462

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y ++   + K K + KA  +L +M   NL+P    Y   I GLC   +++++  ++  +
Sbjct: 463 IYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREM 522

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY------------- 591
            +  ++     YTT+I A+   G   +A+    +M + G +I++  Y             
Sbjct: 523 MDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLV 582

Query: 592 --TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                +F  M  NG  P+  I   ++    +   L     L   M+  G+ PDK +
Sbjct: 583 QQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLV 638


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 164/622 (26%), Positives = 286/622 (45%), Gaps = 71/622 (11%)

Query: 37  LLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGP 96
           ++  +   D++  L+  +++   P N+Y+ +I+I   C  S+L     F   T GK    
Sbjct: 85  VVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLP----FALSTFGK---- 136

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
                                      + K G HP   +++ L+HGLC+   + EAL F 
Sbjct: 137 ---------------------------ITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF 169

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           + +     +P+ I ++ L  G     ++  A  ++ +++  G  P+ +TY  ++ G C++
Sbjct: 170 HQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 225

Query: 217 GNVEEGLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           G+    L L R++      K NV+ YS ++  + K GR  +A  L  EM+  G+ P+L T
Sbjct: 226 GDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFT 285

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ +I G C   +  +A +L  EM  +++SP+      ++  L ++    EA   ++ ++
Sbjct: 286 YNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEML 345

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
               I + + YN MIDG+ K   +  A +++  +  K  SP ++TF+ LI G+C   +V 
Sbjct: 346 PRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVD 405

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           D  +LL  +   GL  + +TYTT ++ +C+ GN+   L LLQEM +  + P  VT   ++
Sbjct: 406 DGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLL 465

Query: 456 KGLCKQWKLQEAVQLLEDMY-----------VIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            GLC   KL++A+++ + M               V PD  TYN +I          +A +
Sbjct: 466 DGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEE 525

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           L  +M    L P + TYN +IDGLC    L  A  +  S+     S   V +TT+I  +C
Sbjct: 526 LYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYC 585

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
             G V   +  FC+M  +G   +   Y                      ++  F Q G++
Sbjct: 586 KVGRVGDGLEVFCEMGRRGIVANAITY--------------------RTLIHGFCQVGNI 625

Query: 625 GSVFELAAVMIKSGLLPDKFLI 646
               ++   MI SG+ PD   I
Sbjct: 626 NGALDIFQEMISSGVYPDTITI 647



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 259/504 (51%), Gaps = 30/504 (5%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMWDLYDDIKVSETPR---NV 63
           R G V +AV ++ +M E  L+ +  TY +++  + +  D +  L    K+ E  R   NV
Sbjct: 189 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNV 248

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
              S +IDGL +  R  DA     E   K   P++ + N +++ +C  G    A+ L   
Sbjct: 249 VIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLRE 308

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M +  + PD  ++++LI+ L   G   EA E  N+M   G+ P+ ITY+ +  GF   ++
Sbjct: 309 MFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A ++   +  KG  PD++T+++LI GYC    V++G+KL   M  +G   N I Y+ 
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+   C+ G ++ AL LL EM + G+ P++VT + L+ GLC   K+  A++++       
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMF------- 481

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEA 362
                             +++ +++M  D+    N ++ DV  YNI+I G +  G   EA
Sbjct: 482 ------------------KVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEA 523

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +LY ++  + + P  +T+NS+I G CK  ++ +A ++ D++   G  P  VT+TT +N 
Sbjct: 524 EELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLING 583

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC+ G +   L +  EM  + I    +TY  +I G C+   +  A+ + ++M   GV PD
Sbjct: 584 YCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPD 643

Query: 483 QITYNTIIRSFCKCKDLRKAFQLL 506
            IT   ++      ++L++A Q L
Sbjct: 644 TITIRNMLTGLWSKEELKRAVQCL 667



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 221/467 (47%), Gaps = 25/467 (5%)

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L  GFH +  +  A  +   ++     P ++ +  L+    ++   +  + L   M  + 
Sbjct: 47  LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              N+ ++++L+   C   ++  AL    ++  +G  P LVT+S L+ GLC +D+V +A+
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
             ++++C     PN  A   ++ GLC +  + EA    D ++      + + Y  ++DG 
Sbjct: 167 HFFHQIC----KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222

Query: 354 VKLGNIGEAVQLYRQLIE-KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
            K+G+   A+ L R++ E  RI P++V ++++I G  K+G+  DA+ L   ++  G+ P+
Sbjct: 223 CKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPN 282

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             TY   +N +C  G       LL+EM  + + P  VT++V+I  L K+ K  EA +L  
Sbjct: 283 LFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYN 342

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +M   G+ P+ ITYN++I  F K   L  A ++   M      P   T++ILIDG C   
Sbjct: 343 EMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAK 402

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            + +   LL  +    +    + YTT+I   C  G+++ A+    +M+            
Sbjct: 403 RVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMI------------ 450

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                   S+G  P+   C  +L      G L    E+  VM KS +
Sbjct: 451 --------SSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM 489


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 151/513 (29%), Positives = 256/513 (49%), Gaps = 9/513 (1%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++ GL    +   A+   +E     F P+  + N ++  +CK G    A  +F  M   G
Sbjct: 3   LLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSG 62

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           L P+A + N L+ GLC  G M  AL+   +M      P + +++IL +GF +  ++  A 
Sbjct: 63  LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDAL 122

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYC----QIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             +Q +    S     TY +++ G C        +E+ ++  + M + G + ++ +Y +L
Sbjct: 123 AHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHIL 182

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           LS++  SGR+ EA  L     A+   PD++TY++L+ G CK  + ++A  L  E+     
Sbjct: 183 LSALSDSGRMAEAHALF---SAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 239

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN F +  I+   C+ + + EA   F  +I SNC+ + V +N +I G+ K G + +A++
Sbjct: 240 EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIK 299

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFC-KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           L+ ++ +     +IVT+N+LI   C K G V  A  L + ++  GL P+ VTY + +  +
Sbjct: 300 LFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF 359

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+   +   +    EME K   P  +TY+++I GLCK  +++EA + LEDM   G TP  
Sbjct: 360 CDARRLSEAMQYFDEMEGKC-APNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTV 418

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TY  +I  FCKC +L+ A     +M L    P +  +N LIDGLC      +   LL  
Sbjct: 419 VTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCH 478

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           +         + Y  +I   C+   V  A   F
Sbjct: 479 MHAEGCKPDVITYNCLISGLCSANRVEDAQRLF 511



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 259/510 (50%), Gaps = 15/510 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRN 62
           + + G +H AV V + MK   L  +  T N+LL  L     M     L+ +++       
Sbjct: 42  FCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPT 101

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC----KLGFAEVAK 118
             +++I++ G     R++DA+  LQ+        +  + N ++   C         E A 
Sbjct: 102 SASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAM 161

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             F  M   G+ PD  SY+IL+  L  +G M EA    + M      PD +TY++L  G+
Sbjct: 162 EFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGY 218

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             + Q   A  +++++L  G +P++ TY+++I  YC++  VEE  ++   M+      N 
Sbjct: 219 CKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNA 278

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC-KQDKVHKAIQLYN 297
           + ++ L++  CK+G +++A+ L  EME +G K  +VTY+ LI  LC K+  V+ A+ L+N
Sbjct: 279 VTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFN 338

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           ++    ++P    + +++ G C+   ++EA  YFD +    C  +V+ Y+I+IDG  K+ 
Sbjct: 339 KLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVR 397

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EA +    +     +P++VT+  LI GFCK G++  A    + +KL G  P+ V + 
Sbjct: 398 RMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFN 457

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T ++  C+       L LL  M  +   P  +TY  +I GLC   ++++A +L + M   
Sbjct: 458 TLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM--- 514

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
              P+  T+N +IR  C  K + +A  +L+
Sbjct: 515 ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/518 (28%), Positives = 253/518 (48%), Gaps = 15/518 (2%)

Query: 32  QTYNSLLYNLRHTDIMW---DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
            TYN L+        M     ++ D+K S    N  T + ++ GLC+  ++  A+   +E
Sbjct: 33  HTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFRE 92

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI--- 145
                F P+  S N ++  +   G    A      M K        +YN+++ GLC    
Sbjct: 93  MQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENK 152

Query: 146 -AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
            A  +E+A+EF  +M   GVEPD  +Y IL        +++ A  +   +      PDI+
Sbjct: 153 SANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTC---SPDIM 209

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TY VL+ GYC+IG   E   L + +L  G++ NV  YS++++  CK  +++EA  +  +M
Sbjct: 210 TYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKM 269

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM- 323
                 P+ VT++ LI G CK   +  AI+L+ EM           +  ++  LC+K   
Sbjct: 270 IESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGG 329

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           +  A   F+ L  +     +V YN +I G+     + EA+Q + ++ E + +P+++T++ 
Sbjct: 330 VYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSI 388

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI G CK  ++ +A + L+ +K HG  P+ VTY   +N +C+ G ++  L   ++M+   
Sbjct: 389 LIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAG 448

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             P  V +  +I GLCK  +  + ++LL  M+  G  PD ITYN +I   C    +  A 
Sbjct: 449 CAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQ 508

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +L + M      P   T+N LI GLC    ++ A  +L
Sbjct: 509 RLFDGMA---CAPNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 264/546 (48%), Gaps = 15/546 (2%)

Query: 35  NSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAG 91
           N+LL  L   R  D    L+ ++       N +T +++I G C+  ++  A+    +   
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
               P+  ++N ++   C++G    A  LF  M      P + S+NIL+ G  +AG + +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGF----HLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           AL    DM +        TY+++ KG        +++  A +  +++   G +PD+ +Y 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +L+      G + E   L   M       +++ Y+VL+   CK G+  EA  L+ E+   
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTCSP---DIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G +P++ TYSI+I   CK DKV +A +++ +M      PN+     ++ G C+  M+ +A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYV-KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
              F  +    C   +V YN +ID    K G +  AV L+ +L    ++P+IVT+NSLI 
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           GFC   ++++A +  D ++     P+ +TY+  ++  C+   ++     L++M+     P
Sbjct: 358 GFCDARRLSEAMQYFDEME-GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTP 416

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
           T VTY  +I G CK  +L+ A+   E M + G  P+ + +NT+I   CK +      +LL
Sbjct: 417 TVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLL 476

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
             M     +P   TYN LI GLC    +++A  L   +     +     +  +I+  CA+
Sbjct: 477 CHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA---CAPNVTTFNFLIRGLCAQ 533

Query: 567 GDVHKA 572
             V +A
Sbjct: 534 KKVEEA 539



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/448 (29%), Positives = 229/448 (51%), Gaps = 9/448 (2%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N L+ GL  A   ++AL    ++      P+A TY++L +GF    Q+  A  V   +  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
            G  P+  T   L+ G C+IG +   LKL   M +  F     ++++LL     +GR+ +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK----VHKAIQLYNEMCSKRISPNSFAHG 312
           AL  L +M          TY+++++GLC ++K    + +A++ + EM +  + P+  ++ 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            +L  L +   + EA   F ++    C  D++ YN+++DGY K+G   EA  L +++++ 
Sbjct: 181 ILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P++ T++ +I  +CK  KV +A  +   +      P+AVT+ T +  +C+ G ++  
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLC-KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
           + L  EME      T VTY  +I  LC K+  +  AV L   +   G+TP  +TYN++I+
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            FC  + L +A Q  ++M      P   TY+ILIDGLC    +K A   L  ++ H  + 
Sbjct: 358 GFCDARRLSEAMQYFDEME-GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTP 416

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           T V Y  +I   C  G++  A+ FF +M
Sbjct: 417 TVVTYGGLINGFCKCGELKSALLFFEKM 444



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 185/378 (48%), Gaps = 14/378 (3%)

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LLS +  + + D+AL L  E+ A    P+  TY++LIRG CK  ++H+A+ ++++M S
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             + PN+     +LLGLCE   ++ A   F  +     +     +NI++ G+   G + +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD----ARRLLDTIKLHGLEPSAVTYT 417
           A+   + + +   S +  T+N ++ G C   K A+    A      +K  G+EP   +Y 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++A  + G +    AL   M      P  +TY V++ G CK  +  EA  L++++   
Sbjct: 181 ILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G  P+  TY+ II  +CK   + +A+++  +M   N  P + T+N LI G C  G L++A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAE-GDVHKAMTFFCQMVEKGFEISIRDYTKSFF 596
             L   +++     T V Y T+I + C + G V+ A+  F ++   G   +I  Y     
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNS--- 354

Query: 597 CMMLSNGFPPDQEICEVM 614
              L  GF   + + E M
Sbjct: 355 ---LIQGFCDARRLSEAM 369



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 19/210 (9%)

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L L +E+      P   TY V+I+G CK  ++ +AV +  DM   G+ P+  T NT++  
Sbjct: 17  LRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLG 76

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            C+   +  A +L  +M      PTSA++NIL+ G  + G +++A   L  +++ + S+ 
Sbjct: 77  LCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVA 136

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE 612
              Y  ++K  C E   +K+     Q +E             FF  M ++G  PD E   
Sbjct: 137 TGTYNLVLKGLCWE---NKSANRLEQAME-------------FFKEMKASGVEPDLESYH 180

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           ++L A    G +     L + M  S   PD
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTCS---PD 207


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 247/488 (50%), Gaps = 2/488 (0%)

Query: 110 KLGFAEV--AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           K GF  +  A  LF  ++     P    +N+++  +        A+  +  MG  G+ P 
Sbjct: 53  KSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPS 112

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            +T SIL   +  L  +  A+ V+  +L +G   + +T T ++ G C  G V + L+  +
Sbjct: 113 IVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHD 172

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            +++QGF L+ + Y  L++ +CK G   EA  LL++ME   ++P++V Y++++ GLCK  
Sbjct: 173 SVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDG 232

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
            V +A  LY+++  + I P+ F +  ++ G C      E       ++  N   +V  YN
Sbjct: 233 LVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYN 292

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           I+ID   K G +G+A  +   +IE+   P +VTFN+L+ G+C    V +AR+L DT    
Sbjct: 293 ILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAEC 352

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G+ P   +Y   +  YC+   I   L+L  +M  K + P  VTY+ +I GLCK  ++  A
Sbjct: 353 GITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYA 412

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            +L   ++  G +P+ ITYN ++ + CK + + KA +L N M+   L P  ++YNILI+G
Sbjct: 413 WELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILING 472

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
            C +  +  A  L   +   N+    V Y  +I   C  G +  A   F  M + G  + 
Sbjct: 473 YCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVD 532

Query: 588 IRDYTKSF 595
           +  Y   F
Sbjct: 533 VITYNILF 540



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 239/464 (51%), Gaps = 4/464 (0%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           ++++  + +      AI   ++   +   PS+V+L+ +++ YC LG    A  +  ++LK
Sbjct: 82  NMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLK 141

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G   +A +   ++ GLCI G + +ALEF + +   G   D +TY  L  G   +     
Sbjct: 142 RGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTRE 201

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A++++ K+  +   P++V Y +++ G C+ G V E   L   ++ +G   +V  Y+ L+ 
Sbjct: 202 AFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIH 261

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             C  G+  E   LL +M    +  ++ TY+ILI  LCK+  + KA  + N M  +   P
Sbjct: 262 GFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRP 321

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +      ++ G C    + EAR  FD+        DV  YNI+I GY K   I EA+ L+
Sbjct: 322 DLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLF 381

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++  K+++P+IVT++SLI G CK+G+++ A  L   I   G  P+ +TY   ++A C+ 
Sbjct: 382 NKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKI 441

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
             + + + L   M  + + P   +Y ++I G CK  ++ EA+ L E+M+   + PD +TY
Sbjct: 442 QLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTY 501

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT--SATYNILIDGL 528
           N +I   CK   +  A++L N M  H+  P     TYNIL D  
Sbjct: 502 NCLIDGLCKSGRISHAWELFNVM--HDGGPPVDVITYNILFDAF 543



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 182/355 (51%), Gaps = 3/355 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVY 64
           + G+  +A  ++ KM+   ++ ++  YN ++  L    ++    DLY D+       +V+
Sbjct: 195 KIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVF 254

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I G C   + ++    L +   +    +V + N ++   CK G    A  +  LM
Sbjct: 255 TYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLM 314

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G  PD  ++N L+ G C+   + EA +  +     G+ PD  +Y+IL  G+   ++I
Sbjct: 315 IERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRI 374

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +  K+  K   P+IVTY+ LI G C+ G +    +L   +   G   NVI Y+++
Sbjct: 375 DEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIM 434

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L ++CK   +D+A+ L   M   GL P++ +Y+ILI G CK  ++ +A+ L+ EM  + +
Sbjct: 435 LDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNL 494

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            P+S  +  ++ GLC+   I+ A   F+ +       DV+ YNI+ D + K+ ++
Sbjct: 495 VPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 160/559 (28%), Positives = 284/559 (50%), Gaps = 28/559 (5%)

Query: 93  EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           +F P++   N I+    K    +  K ++  +L   + P+ +++N +++G C  G++ EA
Sbjct: 154 KFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA 213

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
             + + + + G+ PD  TY+ L  G      +  A++V   +  KG   + V+YT LI G
Sbjct: 214 ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHG 273

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            C+ G + E LKL   M        V  Y+VL+ ++  SGR  EAL L  EM+  G +P+
Sbjct: 274 LCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN 333

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           + TY++LI GLCK++K+ +A ++ +EM  K + P+   + A++ G C++ MI +A    D
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD 393

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +  ++C  +   YN +I G  K   + +A+ L  +++E+++SPS++T+NSLI+G CK  
Sbjct: 394 LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVN 453

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
            +  A RLL  +  +GL P   TY+ F++  C+EG ++    L   ++ K +    V YT
Sbjct: 454 DLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYT 513

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I G CK  K+  A  LLE M      P+  TYN +I   CK K +++A  L+ +M   
Sbjct: 514 ALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL----TKVAYTTIIKAHCAEGD 568
            ++PT  TY ILI  +  +G   +A    + +  H +SL        YT  + A+ ++G 
Sbjct: 574 GVKPTVVTYTILIGEMLKDGAFDHA----LKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM 629

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
           + +      +M E+G    +  YT                    V++  + + G     F
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYT--------------------VLIDGYARLGLTHRAF 669

Query: 629 ELAAVMIKSGLLPDKFLIN 647
           +    M+ +G  P  ++++
Sbjct: 670 DFLKCMVDTGCKPSLYIVS 688



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 152/501 (30%), Positives = 249/501 (49%)

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           E    +  P++ + NA+++ YCK+G    A+     +++ GLHPD F+Y  LI G C   
Sbjct: 184 ELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNK 243

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            ++ A E    M + G + + ++Y+ L  G     +I+ A K+   +      P + TYT
Sbjct: 244 GVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           VLI      G   E L L   M  +G + NV  Y+VL+  +CK  ++DEA  +L EM   
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK 363

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL P +VTY+ LI G CK+  +  A ++ + M S    PN+  +  ++ GLC+K  + +A
Sbjct: 364 GLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
               + ++       ++ YN +I G  K+ ++  A +L   + E  + P   T++  I  
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G+V +A  L D++K  G++ + V YT  ++ YC+ G I    +LL+ M   A  P 
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPN 543

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TY V+I+GLCK+ K++EA  L+  M  +GV P  +TY  +I    K      A ++ N
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M     +P   TY   +      G L+  D ++  + E  I    V YT +I  +   G
Sbjct: 604 HMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLG 663

Query: 568 DVHKAMTFFCQMVEKGFEISI 588
             H+A  F   MV+ G + S+
Sbjct: 664 LTHRAFDFLKCMVDTGCKPSL 684



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 177/672 (26%), Positives = 314/672 (46%), Gaps = 42/672 (6%)

Query: 12  VHDAVFVIAKMK------ELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRN 62
           + D +FV+   +      E   K +++ YN++L +L      D M  +Y ++  ++   N
Sbjct: 134 IEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPN 193

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           +YT + +++G C+   + +A L+  +       P   +  +++  +C+    + A  +F 
Sbjct: 194 IYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFL 253

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +M + G   +  SY  LIHGLC AG + EAL+   DM      P   TY++L        
Sbjct: 254 IMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A  +  ++  KG +P++ TYTVLI G C+   ++E  K+   M  +G   +V+ Y+
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   CK G ID+A  +L  ME+    P+  TY+ LI GLCK+ KVHKA+ L N+M  +
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
           ++SP+   + +++ G C+   +  A      +  +  + D   Y++ ID   K G + EA
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L+  +  K +  + V + +LI G+CK GK+  A  LL+ +      P++ TY   +  
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+E  ++   +L+ +M T  + PT VTYT++I  + K      A+++   M  +G  PD
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA----D 538
             TY   + ++     L +   ++ +M    + P   TY +LIDG    G    A     
Sbjct: 614 VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673

Query: 539 CLL-----VSLQEHNISLTKVAYTTIIKAHCAEGDVHK---------AMTFFCQMVEKGF 584
           C++      SL   +I +  +++   +K   +E  +           A+  F +MVE G 
Sbjct: 674 CMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGC 733

Query: 585 EISIRDYTK--SFFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
            I +  Y    + FC              M   G  P ++I   +L    + G       
Sbjct: 734 TIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVR 793

Query: 630 LAAVMIKSGLLP 641
           L   M+++GLLP
Sbjct: 794 LVDAMVENGLLP 805



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 167/675 (24%), Positives = 301/675 (44%), Gaps = 36/675 (5%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G V +A    +K+ +  L     TY SL+      +  D  ++++  +      RN
Sbjct: 204 YCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRN 263

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             + + +I GLC+  R+ +A+    +       P+V +   ++      G    A  LF 
Sbjct: 264 EVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFN 323

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + G  P+  +Y +LI GLC    M+EA +  ++M   G+ P  +TY+ L  G+    
Sbjct: 324 EMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEG 383

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            I  A++++  +      P+  TY  LICG C+   V + + L   ML +    ++I Y+
Sbjct: 384 MIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYN 443

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   CK   ++ A  LL  M   GL PD  TYS+ I  LCK+ +V +A  L++ + +K
Sbjct: 444 SLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +  N   + A++ G C+   I  A    + ++   C+ +   YN++I+G  K   + EA
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L  +++   + P++VT+  LI    K+G    A ++ + +   G +P   TYT F++A
Sbjct: 564 SSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           Y  +G ++ +  ++ +M  + I P  VTYTV+I G  +      A   L+ M   G  P 
Sbjct: 624 YFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683

Query: 483 QITYNTIIRSFC---KCKDLRK---------------AFQLLNQMWLHNLEPTSATYNIL 524
               + +I++     + K+ R                A +L  +M  H      + Y  L
Sbjct: 684 LYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGAL 743

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           I G C    L+ A  L+  ++E  +S ++  Y +++   C  G   +A+     MVE G 
Sbjct: 744 IAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGL 803

Query: 585 EISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
              +  Y                K+ F  +LS G+  D+   +V++    +   +    E
Sbjct: 804 LPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSE 863

Query: 630 LAAVMIKSGLLPDKF 644
           L  +M + G  P+  
Sbjct: 864 LIDIMEEKGCQPNPL 878



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 150/595 (25%), Positives = 263/595 (44%), Gaps = 20/595 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +L +  S +G   +A+ +  +MKE   + ++ TY  L+  L      D    +  ++   
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK 363

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +V T + +IDG C++  + DA   L        GP+  + N ++   CK      A
Sbjct: 364 GLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   ML+  L P   +YN LIHG C    +E A    + M  +G+ PD  TYS+    
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A  +   +  KG   + V YT LI GYC++G ++    L E ML+     N
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPN 543

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              Y+VL+  +CK  ++ EA  L+ +M  +G+KP +VTY+ILI  + K      A++++N
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            M S    P+   + A L     + M+ E       +     + D+V Y ++IDGY +LG
Sbjct: 604 HMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLG 663

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
               A    + +++    PS+   + LI       ++ + R  +      G++  + T  
Sbjct: 664 LTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEI------GIDSVSNTL- 716

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
                       +  L L ++M           Y  +I G C+Q +L+EA  L+  M   
Sbjct: 717 ----------EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKER 766

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G++P +  YN+++   CK     +A +L++ M  + L P   +Y +L+ GL + G  + A
Sbjct: 767 GMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKA 826

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             +   L     +  +VA+  +I        V +       M EKG + +   Y+
Sbjct: 827 KAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYS 881



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 147/613 (23%), Positives = 269/613 (43%), Gaps = 93/613 (15%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
             G +++A+ + A M E +   +++TY  L+Y L    R  + + +L++++K      NV
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL-NLFNEMKEKGCEPNV 334

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE-------- 115
           +T +++IDGLC+++++ +A   L E + K   PSVV+ NA++  YCK G  +        
Sbjct: 335 HTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDL 394

Query: 116 ---------------------------VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
                                       A  L   ML+  L P   +YN LIHG C    
Sbjct: 395 MESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVND 454

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +E A    + M  +G+ PD  TYS+         ++  A  +   +  KG   + V YT 
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI GYC++G ++    L E ML+     N   Y+VL+  +CK  ++ EA  L+ +M  +G
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           +KP +VTY+ILI  + K      A++++N M S    P+   + A L     + M+ E  
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634

Query: 329 MYFDSLIMSNCIQDVVLYNI--------------------MID----------------- 351
                +     + D+V Y +                    M+D                 
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL 694

Query: 352 -------------GYVKLGNIGE---AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                        G   + N  E   A++L+ +++E   +  +  + +LI GFC+  ++ 
Sbjct: 695 SHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLE 754

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A+ L+  +K  G+ PS   Y + ++  C+ G     + L+  M    + P   +Y +++
Sbjct: 755 EAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLV 814

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GL  +   ++A  +   +   G   D++ +  +I    K   + +  +L++ M     +
Sbjct: 815 CGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQ 874

Query: 516 PTSATYNILIDGL 528
           P   TY++LI+GL
Sbjct: 875 PNPLTYSLLIEGL 887



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 196/420 (46%), Gaps = 38/420 (9%)

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
           + L  GFK NV +YS +L+ + ++  +  A  +   M               I+  C  +
Sbjct: 91  IALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISM---------------IKSCCSIE 135

Query: 288 KVHKAIQLYNEMCSK---RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
            V   ++++ +M +    +  P    +  IL+ L +  +I E +  +  L+ +    ++ 
Sbjct: 136 DVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIY 195

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            +N M++GY K+GN+ EA     ++++  + P   T+ SLI G C+N  V +A  +   +
Sbjct: 196 TFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIM 255

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G + + V+YT  ++  CE G I   L L  +M      PT  TYTV+I  L    + 
Sbjct: 256 PQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRK 315

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            EA+ L  +M   G  P+  TY  +I   CK   + +A ++L++M    L P+  TYN L
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNAL 375

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           IDG C  G + +A  +L  ++ ++       Y  +I   C +  VHKAM    +M+E+  
Sbjct: 376 IDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL 435

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
             S+  Y          N     Q  C+V         DL S + L ++M ++GL+PD++
Sbjct: 436 SPSLITY----------NSLIHGQ--CKV--------NDLESAYRLLSLMNENGLVPDQW 475



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 20/282 (7%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKV---SETPR 61
            Y   GM+ +   VIAKM E  +   + TY  L+       +    +D +K    +    
Sbjct: 623 AYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKP 682

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++Y  SI+I  L  ++R+++           E G   VS N +   Y      E+A  LF
Sbjct: 683 SLYIVSILIKNLSHENRMKET--------RSEIGIDSVS-NTL--EY------EIALKLF 725

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+++G   D   Y  LI G C    +EEA    + M   G+ P    Y+ L      L
Sbjct: 726 EKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKL 785

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
              + A +++  ++  G  P + +Y +L+CG    G+ E+   +   +LS G+  + +A+
Sbjct: 786 GVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAW 845

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
            VL+  + K   +DE   L+  ME  G +P+ +TYS+LI GL
Sbjct: 846 KVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 160/537 (29%), Positives = 269/537 (50%), Gaps = 36/537 (6%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM-E 150
           K++G      +       + G    A+  F  +L YG+   A S N+ +  L     M  
Sbjct: 33  KDWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLG 92

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
             L+  ++  + GV  +  +Y+IL      L +I  A  ++ ++  KG  PD+V+YT +I
Sbjct: 93  MVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTII 152

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            GYC +G +++ ++L + M  +G K N+  YS ++  +CKSG++ E   +L EM   G+ 
Sbjct: 153 DGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVF 212

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD V Y+ LI G CK      A +L++EM ++ I P+S A  A++ GL     + EA   
Sbjct: 213 PDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKL 272

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV----------- 379
           F+ +I      D V Y  +IDGY KLG + +A  L+ Q+++  ++P++V           
Sbjct: 273 FNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCK 332

Query: 380 ------------------------TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
                                   T+N+++ G CK G +  A +L++ +K  GL P  +T
Sbjct: 333 SGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTIT 392

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           YTT M+AY + G + +   LL+EM  + + PT VT+ V++ GLC   KL++  +LL+ M 
Sbjct: 393 YTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWML 452

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G+ P+  TYN+I++ +C   ++R + ++   M    + P S TYNILI G C   ++K
Sbjct: 453 EKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMK 512

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            A  L   + E   +LT  +Y  +IK       + +A   F +M  +G   S   Y 
Sbjct: 513 EAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYN 569



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 146/475 (30%), Positives = 248/475 (52%), Gaps = 5/475 (1%)

Query: 57  SETPR-----NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
           SE P+     N  + +I+++ L +  ++++A   L     K   P VVS   I+  YC +
Sbjct: 99  SEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHV 158

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G  +    L   M   GL P+ ++Y+ +I  LC +G + E  +   +M + GV PD + Y
Sbjct: 159 GELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIY 218

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + L  GF  L     A+K+  ++  +   PD + ++ LICG    G V E  KL   M+ 
Sbjct: 219 TTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIK 278

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +GF+ + + Y+ L+   CK G + +A  L  +M  +GL P++VTY+ L  GLCK  ++  
Sbjct: 279 KGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDT 338

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A +L +EMC K +  N   +  I+ GLC+   I +A    + +  +    D + Y  ++D
Sbjct: 339 ANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMD 398

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
            Y K G + +A +L R+++++ + P++VTFN L+ G C +GK+ D  RLL  +   G+ P
Sbjct: 399 AYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMP 458

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           +A TY + M  YC   N++    + + M  + + P   TY ++IKG CK   ++EA  L 
Sbjct: 459 NAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLH 518

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           ++M          +YN +I+ F K K L +A QL  +M    L  ++  YN+ +D
Sbjct: 519 KEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVD 573



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 226/437 (51%), Gaps = 5/437 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPR 61
           Y   G +   V ++ +M+   LK ++ TY+S++  L  +  + +    L + +K    P 
Sbjct: 155 YCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPD 214

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V   ++ IDG C+    Q A     E   +E  P  ++ +A++      G    A  LF
Sbjct: 215 HVIYTTL-IDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF 273

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+K G  PD  +Y  LI G C  G M++A    N M + G+ P+ +TY+ LA G    
Sbjct: 274 NEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKS 333

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A +++ ++  KG   +I TY  ++ G C+ GN+ + +KL E M   G   + I Y
Sbjct: 334 GELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITY 393

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+ +  K+G + +A  LL EM   GL+P +VT+++L+ GLC   K+    +L   M  
Sbjct: 394 TTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLE 453

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K I PN+  + +I+   C +  +  +   +  +     + D   YNI+I G+ K  N+ E
Sbjct: 454 KGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKE 513

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+++++EKR + +  ++N+LI GF K  K+ +AR+L + ++  GL  SA  Y  F++
Sbjct: 514 AWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVD 573

Query: 422 AYCEEGNIQRLLALLQE 438
              EEGN++  L L  E
Sbjct: 574 MNYEEGNMETTLELCDE 590



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 138/304 (45%), Gaps = 25/304 (8%)

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK---VADAR 398
           D  ++++     V+ G + EA + + +L+   ++ S  + N  +Y  C + K   +    
Sbjct: 38  DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCN--LYLTCLSSKRDMLGMVL 95

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           ++       G+  +  +Y   MN+    G I+    LL  ME K   P  V+YT +I G 
Sbjct: 96  KVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGY 155

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           C   +LQ+ VQL+++M + G+ P+  TY++II   CK   + +  ++L +M    + P  
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDH 215

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
             Y  LIDG C  G+ + A  L   ++   I    +A++ +I      G V +A   F +
Sbjct: 216 VIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
           M++KG                    F PD+     ++  + + G++   F L   M++ G
Sbjct: 276 MIKKG--------------------FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIG 315

Query: 639 LLPD 642
           L P+
Sbjct: 316 LTPN 319


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 162/540 (30%), Positives = 262/540 (48%), Gaps = 28/540 (5%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVS 57
           +L   +S  G+V +A++V  KM   D+  ++Q  N +L  L      D MW +Y D+   
Sbjct: 131 VLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVAR 187

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NV T   +IDG C+Q     A     E   K+  P+VV    ++   C       A
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEA 247

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + +F  M   G+ P+ ++YN ++ G C    +++ALE   +M   G+ P+ +T+ IL  G
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDG 307

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A K +  +   G  P+I  Y  LI GYC+ GN+ E L L   +       +
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V  YS+L+  +C   R++EA GLL EM+  G  P+ VTY+ LI G CK+  + KAI++ +
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M  K I PN      ++ G C+   +  A   +  +++   + DVV Y  +IDG+ K G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N  EA +L++++ E  + P++ T + LI G CK+G+++DA      IKL   +    T  
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA------IKLFLAKTGTDTTG 541

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           +  N                E++     P HV YT +I+GLC   ++ +A +   DM   
Sbjct: 542 SKTN----------------ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCS 585

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD  T   II+   +   LR    L   +    + P S+ Y +L  G   +G LK+A
Sbjct: 586 GLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSA 645



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/525 (29%), Positives = 260/525 (49%), Gaps = 38/525 (7%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+ F   +LI      G +EEAL     M    V P     +++  G     +    WKV
Sbjct: 126 PNVFG--VLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              ++ +G+ P++VTY  LI G C+ G+  +  +L + M+ +     V+ Y++L+  +C 
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             RI EA  +   M   G+ P+L TY+ ++ G CK   V KA++LY EM    + PN   
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
            G ++ GLC+ + +  AR +   +     + ++ +YN +IDGY K GN+ EA+ L+ ++ 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           +  I P + T++ LI G C   ++ +A  LL  +K  G  P+AVTY T ++ YC+EGN++
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           + + +  +M  K I P  +T++ +I G CK  K++ A+ L  +M + G+ PD + Y  +I
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS------- 543
               K  + ++AF+L  +M    L P   T + LIDGLC +G + +A  L ++       
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTT 540

Query: 544 ------LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
                 L     S   V YT +I+  C +G + KA  FF                     
Sbjct: 541 GSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSD------------------- 581

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            M  +G  PD   C V++    +   L  V  L A ++K G++P+
Sbjct: 582 -MRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 243/491 (49%), Gaps = 13/491 (2%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P++ + N ++    K G  +    ++  M+  G  P+  +Y  LI G C  G   +A   
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            ++M    + P  + Y+IL +G    S+IS A  + + +   G  P++ TY  ++ GYC+
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           I +V++ L+L + ML  G   NV+ + +L+  +CK+  +  A   L +M + G+ P++  
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G CK   + +A+ L++E+    I P+ F +  ++ GLC  + + EA      + 
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
               + + V YN +IDGY K GN+ +A+++  Q+ EK I P+I+TF++LI G+CK GK+ 
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L   + + GL P  V YT  ++ + ++GN +    L +EM+   + P   T + +I
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515

Query: 456 KGLCKQWKLQEAVQLL-------------EDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            GLCK  ++ +A++L               ++     +P+ + Y  +I+  C    + KA
Sbjct: 516 DGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKA 575

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            +  + M    L P   T  ++I G      L++   L   + +  I      Y  + K 
Sbjct: 576 SKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKG 635

Query: 563 HCAEGDVHKAM 573
           +   G +  A+
Sbjct: 636 YEESGYLKSAL 646



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 216/449 (48%), Gaps = 61/449 (13%)

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C + NV   L+      S  F  NV  + VL+ +  + G ++EAL + Y+M+ +   P +
Sbjct: 110 CSVFNVLSRLE------SSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMDVL---PAM 158

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
              ++++ GL K+ +     ++Y +M ++  SPN                          
Sbjct: 159 QACNMVLDGLVKKGRFDTMWKVYGDMVARGASPN-------------------------- 192

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
                    VV Y  +IDG  + G+  +A +L+ ++IEK+I P++V +  LI G C   +
Sbjct: 193 ---------VVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           +++A  +  T++  G+ P+  TY T M+ YC+  ++++ L L QEM    + P  VT+ +
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I GLCK  ++  A + L DM   GV P+   YN +I  +CK  +L +A  L +++  H 
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           + P   TY+ILI GLC    ++ AD LL  +++       V Y T+I  +C EG++ KA+
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 574 TFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAF 618
               QM EKG E +I  ++                  +  M+  G  PD      ++   
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGH 483

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            + G+    F L   M ++GL P+ F ++
Sbjct: 484 FKDGNTKEAFRLHKEMQEAGLHPNVFTLS 512


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/498 (31%), Positives = 250/498 (50%), Gaps = 5/498 (1%)

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           E   K   P+V +   +M   C +   + A  L   M ++G  P+A  Y  LIH L   G
Sbjct: 207 EMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVG 266

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            + E L+   +M   G  PD  T++    G   + +I  A K++ ++L++G  P+  TY 
Sbjct: 267 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 326

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE-MEA 266
           VL+ G C++G V+E      ++L++    NV+ ++ L++     GR+DEA  +++E M +
Sbjct: 327 VLMHGLCRMGKVDEA----RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLS 382

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           VG  PD+ TY+ LI GLCK+  +  A +L NEM  K   PN   +  ++   C++  + E
Sbjct: 383 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 442

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           AR   D +       + V YN +I    K   + +A+ ++  +  K   P I TFNSLI+
Sbjct: 443 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 502

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G CK  K  +A  L   + L G+  + +TY T ++A+   G +Q  L L+ +M  +    
Sbjct: 503 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 562

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             +TY  +IK LC+   +++ + L EDM   G+ P+ I+ N +I   C+  +++ A + L
Sbjct: 563 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 622

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
             M    L P   TYN LI+GLC  G  + A  L   LQ   I    + Y T+I  HC E
Sbjct: 623 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKE 682

Query: 567 GDVHKAMTFFCQMVEKGF 584
           G    A     + V+ GF
Sbjct: 683 GMFDDAHLLLSRGVDSGF 700



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 154/568 (27%), Positives = 288/568 (50%), Gaps = 9/568 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPR 61
           Y R G+   A  ++  M+ +   + + ++YN +L  L   +   ++ +++ ++       
Sbjct: 156 YGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISP 215

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            VYT  +V+  LC  + +  A   L++       P+ +    ++    K+G       L 
Sbjct: 216 TVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLL 275

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  G  PD  ++N  IHGLC    + EA +  + M   G  P++ TY +L  G   +
Sbjct: 276 EEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRM 335

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LREVMLSQGFKLNVIA 240
            ++  A    + LL K  +P++V +  LI GY   G ++E    + E MLS G   ++  
Sbjct: 336 GKVDEA----RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFT 391

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+  +CK G +  A  L+ EM+  G +P+++TY+ILI   CK+ ++ +A  + +EM 
Sbjct: 392 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 451

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K ++ N+  +  ++  LC+ E + +A   F  +    C  D+  +N +I G  K+    
Sbjct: 452 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 511

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+ LY+ ++ + +  + +T+N+LI+ F + G + +A +L++ +   G     +TY   +
Sbjct: 512 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 571

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
            A C  GNI++ LAL ++M +K + P +++  ++I GLC+   +Q A++ L DM   G+T
Sbjct: 572 KALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT 631

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +TYN++I   CK    ++A  L +++ +  + P + TYN LI   C  G   +A  L
Sbjct: 632 PDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLL 691

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           L    +      +V +  ++     EGD
Sbjct: 692 LSRGVDSGFIPNEVTWYILVSNFIKEGD 719



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/499 (30%), Positives = 242/499 (48%), Gaps = 26/499 (5%)

Query: 146 AGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
           AG   +A     DM G +  EP   +Y+++       +       V  ++L KG  P + 
Sbjct: 159 AGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVY 218

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           T+ V++   C +  V+    L + M   G   N I Y  L+ ++ K GR++E L LL EM
Sbjct: 219 TFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEM 278

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
             +G  PD+ T++  I GLCK  ++H+A +L + M  +  +PNSF +G ++ GLC    +
Sbjct: 279 LLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKV 338

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA-VQLYRQLIEKRISPSIVTFNS 383
            EARM  + +   N    VVL+N +I+GYV  G + EA   ++  ++     P I T+N+
Sbjct: 339 DEARMLLNKVPNPN----VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 394

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI G CK G +  AR L++ +++ G EP+ +TYT  ++ +C+EG ++    +L EM  K 
Sbjct: 395 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 454

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           +    V Y  +I  LCK  K+Q+A+ +  DM   G  PD  T+N++I   CK     +A 
Sbjct: 455 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 514

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L   M L  +   + TYN LI      G ++ A  L+  +      L  + Y  +IKA 
Sbjct: 515 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 574

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           C  G++ K +  F  M+ KG                      P+   C +++    + G+
Sbjct: 575 CRAGNIEKGLALFEDMMSKGLN--------------------PNNISCNILINGLCRTGN 614

Query: 624 LGSVFELAAVMIKSGLLPD 642
           +    E    MI  GL PD
Sbjct: 615 IQHALEFLRDMIHRGLTPD 633



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 163/590 (27%), Positives = 274/590 (46%), Gaps = 25/590 (4%)

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK-YGLH 130
           G   + +  DA+L   +  G  F  S+  L  IM  Y + G    A  L   M   Y   
Sbjct: 122 GAAGEFKTIDALLMQMKQEGIVFRESLFIL--IMKHYGRAGLPGQATRLLLDMRGVYSCE 179

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P   SYN+++  L      +       +M   G+ P   T+ ++ K   L++++  A  +
Sbjct: 180 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 239

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++ +   G  P+ + Y  LI    ++G V E LKL E ML  G   +V  ++  +  +CK
Sbjct: 240 LKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 299

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             RI EA  L+  M   G  P+  TY +L+ GLC+  KV +A  L N    K  +PN   
Sbjct: 300 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLN----KVPNPNVVL 355

Query: 311 HGAILLGLCEKEMITEAR-MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
              ++ G   +  + EA+ +  +S++   C  D+  YN +I G  K G +  A +L  ++
Sbjct: 356 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 415

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
             K   P+++T+  LI  FCK G++ +AR +LD +   GL  +AV Y   ++A C++  +
Sbjct: 416 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 475

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           Q  L +  +M +K   P   T+  +I GLCK  K +EA+ L +DM + GV  + ITYNT+
Sbjct: 476 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 535

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I +F +   +++A +L+N M          TYN LI  LC  G+++    L   +    +
Sbjct: 536 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 595

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------S 594
           +   ++   +I   C  G++  A+ F   M+ +G    I  Y                 +
Sbjct: 596 NPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALN 655

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFH-QGGDLGSVFELAAVMIKSGLLPDK 643
            F  +   G  PD  I    LI++H + G       L +  + SG +P++
Sbjct: 656 LFDKLQVEGICPDA-ITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 704



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 3/191 (1%)

Query: 33  TYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN+L++       M +   L +D+     P +  T + +I  LC+   ++  +   ++ 
Sbjct: 531 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 590

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             K   P+ +S N +++  C+ G  + A      M+  GL PD  +YN LI+GLC  G  
Sbjct: 591 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 650

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +EAL   + +   G+ PDAITY+ L            A  ++ + +  G  P+ VT+ +L
Sbjct: 651 QEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 710

Query: 210 ICGYCQIGNVE 220
           +  + + G+ E
Sbjct: 711 VSNFIKEGDQE 721


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/498 (31%), Positives = 250/498 (50%), Gaps = 5/498 (1%)

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           E   K   P+V +   +M   C +   + A  L   M ++G  P+A  Y  LIH L   G
Sbjct: 225 EMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVG 284

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            + E L+   +M   G  PD  T++    G   + +I  A K++ ++L++G  P+  TY 
Sbjct: 285 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 344

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE-MEA 266
           VL+ G C++G V+E      ++L++    NV+ ++ L++     GR+DEA  +++E M +
Sbjct: 345 VLMHGLCRMGKVDEA----RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLS 400

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           VG  PD+ TY+ LI GLCK+  +  A +L NEM  K   PN   +  ++   C++  + E
Sbjct: 401 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 460

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           AR   D +       + V YN +I    K   + +A+ ++  +  K   P I TFNSLI+
Sbjct: 461 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 520

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G CK  K  +A  L   + L G+  + +TY T ++A+   G +Q  L L+ +M  +    
Sbjct: 521 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 580

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             +TY  +IK LC+   +++ + L EDM   G+ P+ I+ N +I   C+  +++ A + L
Sbjct: 581 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 640

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
             M    L P   TYN LI+GLC  G  + A  L   LQ   I    + Y T+I  HC E
Sbjct: 641 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKE 700

Query: 567 GDVHKAMTFFCQMVEKGF 584
           G    A     + V+ GF
Sbjct: 701 GMFDDAHLLLSRGVDSGF 718



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 154/568 (27%), Positives = 288/568 (50%), Gaps = 9/568 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPR 61
           Y R G+   A  ++  M+ +   + + ++YN +L  L   +   ++ +++ ++       
Sbjct: 174 YGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISP 233

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            VYT  +V+  LC  + +  A   L++       P+ +    ++    K+G       L 
Sbjct: 234 TVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLL 293

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  G  PD  ++N  IHGLC    + EA +  + M   G  P++ TY +L  G   +
Sbjct: 294 EEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRM 353

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LREVMLSQGFKLNVIA 240
            ++  A    + LL K  +P++V +  LI GY   G ++E    + E MLS G   ++  
Sbjct: 354 GKVDEA----RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFT 409

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+  +CK G +  A  L+ EM+  G +P+++TY+ILI   CK+ ++ +A  + +EM 
Sbjct: 410 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 469

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K ++ N+  +  ++  LC+ E + +A   F  +    C  D+  +N +I G  K+    
Sbjct: 470 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 529

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+ LY+ ++ + +  + +T+N+LI+ F + G + +A +L++ +   G     +TY   +
Sbjct: 530 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 589

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
            A C  GNI++ LAL ++M +K + P +++  ++I GLC+   +Q A++ L DM   G+T
Sbjct: 590 KALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT 649

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +TYN++I   CK    ++A  L +++ +  + P + TYN LI   C  G   +A  L
Sbjct: 650 PDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLL 709

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           L    +      +V +  ++     EGD
Sbjct: 710 LSRGVDSGFIPNEVTWYILVSNFIKEGD 737



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 150/499 (30%), Positives = 242/499 (48%), Gaps = 26/499 (5%)

Query: 146 AGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
           AG   +A     DM G +  EP   +Y+++       +       V  ++L KG  P + 
Sbjct: 177 AGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVY 236

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           T+ V++   C +  V+    L + M   G   N I Y  L+ ++ K GR++E L LL EM
Sbjct: 237 TFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEM 296

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
             +G  PD+ T++  I GLCK  ++H+A +L + M  +  +PNSF +G ++ GLC    +
Sbjct: 297 LLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKV 356

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA-VQLYRQLIEKRISPSIVTFNS 383
            EARM  + +   N    VVL+N +I+GYV  G + EA   ++  ++     P I T+N+
Sbjct: 357 DEARMLLNKVPNPN----VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 412

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI G CK G +  AR L++ +++ G EP+ +TYT  ++ +C+EG ++    +L EM  K 
Sbjct: 413 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 472

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           +    V Y  +I  LCK  K+Q+A+ +  DM   G  PD  T+N++I   CK     +A 
Sbjct: 473 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 532

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L   M L  +   + TYN LI      G ++ A  L+  +      L  + Y  +IKA 
Sbjct: 533 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 592

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           C  G++ K +  F  M+ KG                      P+   C +++    + G+
Sbjct: 593 CRAGNIEKGLALFEDMMSKGLN--------------------PNNISCNILINGLCRTGN 632

Query: 624 LGSVFELAAVMIKSGLLPD 642
           +    E    MI  GL PD
Sbjct: 633 IQHALEFLRDMIHRGLTPD 651



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 163/590 (27%), Positives = 274/590 (46%), Gaps = 25/590 (4%)

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK-YGLH 130
           G   + +  DA+L   +  G  F  S+  L  IM  Y + G    A  L   M   Y   
Sbjct: 140 GAAGEFKTTDALLMQMKQEGIVFRESLFIL--IMKHYGRAGLPGQATRLLLDMRGVYSCE 197

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P   SYN+++  L      +       +M   G+ P   T+ ++ K   L++++  A  +
Sbjct: 198 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 257

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++ +   G  P+ + Y  LI    ++G V E LKL E ML  G   +V  ++  +  +CK
Sbjct: 258 LKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 317

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             RI EA  L+  M   G  P+  TY +L+ GLC+  KV +A  L N    K  +PN   
Sbjct: 318 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLN----KVPNPNVVL 373

Query: 311 HGAILLGLCEKEMITEAR-MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
              ++ G   +  + EA+ +  +S++   C  D+  YN +I G  K G +  A +L  ++
Sbjct: 374 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 433

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
             K   P+++T+  LI  FCK G++ +AR +LD +   GL  +AV Y   ++A C++  +
Sbjct: 434 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 493

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           Q  L +  +M +K   P   T+  +I GLCK  K +EA+ L +DM + GV  + ITYNT+
Sbjct: 494 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 553

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I +F +   +++A +L+N M          TYN LI  LC  G+++    L   +    +
Sbjct: 554 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 613

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------S 594
           +   ++   +I   C  G++  A+ F   M+ +G    I  Y                 +
Sbjct: 614 NPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALN 673

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFH-QGGDLGSVFELAAVMIKSGLLPDK 643
            F  +   G  PD  I    LI++H + G       L +  + SG +P++
Sbjct: 674 LFDKLQVEGICPDA-ITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 722



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 3/191 (1%)

Query: 33  TYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN+L++       M +   L +D+     P +  T + +I  LC+   ++  +   ++ 
Sbjct: 549 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 608

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             K   P+ +S N +++  C+ G  + A      M+  GL PD  +YN LI+GLC  G  
Sbjct: 609 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 668

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +EAL   + +   G+ PDAITY+ L            A  ++ + +  G  P+ VT+ +L
Sbjct: 669 QEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 728

Query: 210 ICGYCQIGNVE 220
           +  + + G+ E
Sbjct: 729 VSNFIKEGDQE 739


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 187/701 (26%), Positives = 312/701 (44%), Gaps = 58/701 (8%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSE 58
           L   Y +   V DAV V+  M    L   ++T +++L  L   R   ++W+++D+   + 
Sbjct: 154 LVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAG 213

Query: 59  TPRNVYTNSIVIDGLCQQS---RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
              + YT S VI  LC+     R ++ IL+++      F  S+V+ N ++   CK G   
Sbjct: 214 VKPDPYTCSAVIRSLCELKDFCRAKEKILWMESN---RFDLSIVTYNVLIHGLCKGGGVL 270

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            A  +   + + GL  D  +Y  L+ G C     ++ +   N+M   G  P     S L 
Sbjct: 271 EALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLV 330

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            G      I  A+ ++ KL   G  P++  Y  LI   C+  ++++   L + M S    
Sbjct: 331 DGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLP 390

Query: 236 LNVIAYSVLLSSMCKSGRID----------------------------------EALGLL 261
           LN + YS+L+ S CK G +D                                   A   L
Sbjct: 391 LNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFL 450

Query: 262 Y-EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           Y +M   GL+P   T++ LI G CK  +V KA +LY EM  K I+P+ +   A++ GLC 
Sbjct: 451 YTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCS 510

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              + EA   FD ++        V YN+MI+GY K  N+ +A +L   ++   + P   T
Sbjct: 511 TNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYT 570

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +  LI G C  G+V+ A+  +D +    L+ + + Y+  ++ YC +G +   L+   EM 
Sbjct: 571 YRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMI 630

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            + I    V + V+I G  KQ  ++    LL+ MY  G+ PD + Y ++I ++ K    +
Sbjct: 631 QRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFK 690

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           K+ + L+ M      P   TY   ++GLC  G++  A  L   +   NIS   V Y   +
Sbjct: 691 KSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFL 750

Query: 561 KAHCAEGDVHKAMTFFCQMVE------KGFEISIRDYTK--------SFFCMMLSNGFPP 606
            +   EG++ +A     +M++        + I IR + K             M  NG  P
Sbjct: 751 DSLTKEGNMKEATDLHHEMLKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFP 810

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           D      ++    + GD+G+  EL   M++ G+ PD    N
Sbjct: 811 DCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFN 851



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 173/637 (27%), Positives = 293/637 (45%), Gaps = 54/637 (8%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVSE 58
           L   + R     D + ++ +M EL    +    + L+  LR   + D  +DL   +    
Sbjct: 294 LVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFG 353

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              N++  + +I+ LC+   L  A L  +         + V+ + ++  +CK G  +VA+
Sbjct: 354 FLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAE 413

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             F  M++ G+    + YN LI+G C  G +  A      M   G+EP A T++ L  G+
Sbjct: 414 SYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGY 473

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               Q+  A+K+ +++  K   P + T+T LI G C    + E  KL + M+ +  K   
Sbjct: 474 CKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTE 533

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y+V++   CK+  +D+A  LL +M   GL PD  TY  LI GLC   +V  A    ++
Sbjct: 534 VTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDD 593

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           +  K +  N   + A+L G C +  +TEA      +I      D+V + ++IDG +K  +
Sbjct: 594 LHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQD 653

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +     L +++ ++ + P  V + S+I  + K G    +   LD +      P+ VTYT 
Sbjct: 654 MKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTA 713

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHV----------------------------- 449
           FMN  C+ G I R   L ++M T  I P  V                             
Sbjct: 714 FMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGL 773

Query: 450 -----TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
                TY ++I+G CK  +L EA ++L +M   G+ PD ITY+TII   C+  D+  A +
Sbjct: 774 LANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVE 833

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA-----DCL--------LVSLQEHNISL 551
           L + M    +EP S  +N+LI G CVNG L  A     D L        ++ LQ+ ++ +
Sbjct: 834 LWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGV 893

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
                  ++   C  G+V  A+  +  M+ +  ++S+
Sbjct: 894 CNF----LMHGGCVTGEVDTALRLYHSMLTRAVKLSL 926



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 177/662 (26%), Positives = 300/662 (45%), Gaps = 59/662 (8%)

Query: 22  MKELDLKVSIQTYNSLLYNL-RHTDIM--WDLYDDIKVSETPRNVYTNSIVIDGLCQQSR 78
           M+     +SI TYN L++ L +   ++   ++   ++      +V T   ++ G C+  +
Sbjct: 244 MESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQ 303

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
             D I  + E     F P+  +++ ++    K G  + A  L   + ++G  P+ F YN 
Sbjct: 304 FDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNA 363

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF-------------------- 178
           LI+ LC    +++A     +M    +  + +TYSIL   F                    
Sbjct: 364 LINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDG 423

Query: 179 --------------HL-LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
                         H     +S A  +  K++ +G +P   T+T LI GYC+   VE+  
Sbjct: 424 IRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAF 483

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           KL   M  +    +V  ++ L+  +C +  + EA  L  EM    +KP  VTY+++I G 
Sbjct: 484 KLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGY 543

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CK   + KA +L  +M    + P+++ +  ++ GLC    ++ A+ + D L   N   + 
Sbjct: 544 CKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNE 603

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           + Y+ ++ GY   G + EA+    ++I++ I+  +V    LI G  K   +     LL  
Sbjct: 604 MCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKK 663

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +   GL P +V YT+ ++AY +EG+ ++    L  M T+   P  VTYT  + GLCK  +
Sbjct: 664 MYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGE 723

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           +  A  L E M    ++P+ +TY   + S  K  ++++A  L ++M L  L   +ATYNI
Sbjct: 724 IDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEM-LKGLLANTATYNI 782

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           LI G C  G L  A  +L  + E+ I    + Y+TII  HC  GDV  A+  +  M+ KG
Sbjct: 783 LIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKG 842

Query: 584 FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
            E                    PD     +++      G L   FEL   M+  GL P +
Sbjct: 843 VE--------------------PDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQ 882

Query: 644 FL 645
            L
Sbjct: 883 IL 884



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 217/514 (42%), Gaps = 44/514 (8%)

Query: 152 ALEFTNDMGRH-GVEPDAITYSILAKGFHLLSQISGAW---KVIQKLLIKGSDPDIV--- 204
           AL F N +G H  +     +++IL    H L Q    W    ++  LL++GSDP  V   
Sbjct: 79  ALRFFNFLGLHKNMNHTTTSFAILV---HALVQNKLFWPANSLLHTLLLRGSDPKFVFEK 135

Query: 205 --------------TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
                          +  L+  Y Q   V + + +  +ML       V   S +L+ + +
Sbjct: 136 FLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLR 195

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             +      +  E    G+KPD  T S +IR LC+     +A +    M S R   +   
Sbjct: 196 IRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVT 255

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ GLC+   + EA     SL      +DVV Y  ++ G+ ++    + + L  +++
Sbjct: 256 YNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMV 315

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           E    P+    + L+ G  K G +  A  L+  +   G  P+   Y   +NA C+  ++ 
Sbjct: 316 ELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLD 375

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           +   L + M +  +    VTY+++I   CK+  L  A      M   G+      YN++I
Sbjct: 376 KAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLI 435

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CK  DL  A  L  +M    LEPT+ T+  LI G C +  ++ A  L   + E  I+
Sbjct: 436 NGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIA 495

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEI 610
            +   +T +I   C+  ++ +A   F +MVE+  +                    P +  
Sbjct: 496 PSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIK--------------------PTEVT 535

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
             VM+  + +  ++   FEL   M+ +GL+PD +
Sbjct: 536 YNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTY 569


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 274/534 (51%), Gaps = 7/534 (1%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G++ DAV  +A++++L +  + +T N +L  L   R   ++  L+D + V     NV+T 
Sbjct: 148 GLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPVP----NVFTF 203

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +IVID LC++  L +A             P VV+ N+++  Y K G  E  + L   M K
Sbjct: 204 NIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRK 263

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G   D  +YN LI+     G ME+A  +  +M R GV  + +T+S     F     +  
Sbjct: 264 SGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQE 323

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A K+  ++ ++G  P+  TYT L+ G C+ G +++ + L + M+ QG   NV+ Y+V++ 
Sbjct: 324 AMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVD 383

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CK G++ EA  +L  ME  G+K + + Y+ LI G    +   +A+ L N+M +K +  
Sbjct: 384 GLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMEL 443

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +G ++ GLC+ + + EA+     +       + V+Y  ++D   K G   EAV L 
Sbjct: 444 DVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALL 503

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++++    P++VT+ +LI G CK G +++A    + ++  GL+P+   YT  ++ +C+ 
Sbjct: 504 HKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKI 563

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G++ + + L+ EM  K +    V YT +I G  KQ  LQ+A  L   M   G+  D   Y
Sbjct: 564 GSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCY 623

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
              I  FC    +++A  +L++M    + P    YN LI      G+++ A  L
Sbjct: 624 TCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSL 677



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 151/596 (25%), Positives = 266/596 (44%), Gaps = 57/596 (9%)

Query: 47  MWDLYDDIKVSETPRNVYTNSIV---IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNA 103
           + DL     ++  PR     S+V   +  L     L DA+  L         P+  + N 
Sbjct: 115 LVDLLHRAALALGPRRSALPSVVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNH 174

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           I+ R  +     + + LF L+      P+ F++NI+I  LC  G + EA           
Sbjct: 175 ILLRLARNRQGGLVRRLFDLLPV----PNVFTFNIVIDFLCKEGELVEA----------- 219

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
                                     +  ++   G  PD+VTY  LI GY + G++EE  
Sbjct: 220 ------------------------RALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVE 255

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           +L   M   G   +V+ Y+ L++   K GR+++A     EM+  G+  ++VT+S  +   
Sbjct: 256 QLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAF 315

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CK+  V +A++L+ +M  + + PN F + +++ G C+   + +A +  D ++    + +V
Sbjct: 316 CKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 375

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V Y +M+DG  K G + EA  +   +    +  + + + +LI+G   N     A  LL+ 
Sbjct: 376 VTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQ 435

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +K  G+E     Y T +   C++  +    +LL +M    + P  V YT ++  L K  K
Sbjct: 436 MKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGK 495

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
             EAV LL  +   G  P+ +TY  +I   CK   + +A    N+M    L+P    Y  
Sbjct: 496 ESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTA 555

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           LIDG C  G L  A  L+  + +  +SL KV YT++I  +  + ++  A     +M+E G
Sbjct: 556 LIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESG 615

Query: 584 FEISIRDYT--KSFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDL 624
            ++ +  YT   S FC              M+  G  PD+ +   ++  + + G++
Sbjct: 616 LQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNM 671



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 235/470 (50%), Gaps = 3/470 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           + G + +A  +  +MK +     + TYNSL+        + +   L  +++ S    +V 
Sbjct: 212 KEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVV 271

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I+   +  R++ A  +  E   +    +VV+ +  +  +CK G  + A  LF  M
Sbjct: 272 TYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQM 331

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G+ P+ F+Y  L+ G C AG +++A+   ++M   G+ P+ +TY+++  G     ++
Sbjct: 332 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 391

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A  V+  +   G   + + YT LI G+    N E  L L   M ++G +L+V  Y  L
Sbjct: 392 AEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTL 451

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +CK  ++DEA  LL++M   GL+P+ V Y+ ++  L K  K  +A+ L +++     
Sbjct: 452 IWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGF 511

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   + A++ GLC+   I+EA  +F+ +       +V  Y  +IDG+ K+G++ +A+ 
Sbjct: 512 QPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMH 571

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L  ++I+K +S   V + SLI G+ K   + DA  L   +   GL+     YT F++ +C
Sbjct: 572 LMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFC 631

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
               +Q    +L EM    I P    Y  +I+   K   ++EA  L  +M
Sbjct: 632 NMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 218/439 (49%), Gaps = 3/439 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           Y + G + +   ++++M++      + TYN+L+         +  +  + ++K      N
Sbjct: 245 YGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVAN 304

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T S  +D  C++  +Q+A+    +   +   P+  +  +++   CK G  + A  L  
Sbjct: 305 VVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLD 364

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+  GL P+  +Y +++ GLC  G + EA    + M R GV+ + + Y+ L  G  + +
Sbjct: 365 EMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNN 424

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               A  ++ ++  KG + D+  Y  LI G C+   V+E   L   M   G + N + Y+
Sbjct: 425 NSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYT 484

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++ ++ K+G+  EA+ LL+++   G +P++VTY  LI GLCK   + +AI  +N+M   
Sbjct: 485 TIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMREL 544

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN  A+ A++ G C+   + +A    + +I      D V+Y  +IDGY+K  N+ +A
Sbjct: 545 GLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDA 604

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L  ++IE  +   +  +   I GFC    + +AR +L  +   G+ P    Y   +  
Sbjct: 605 FALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRK 664

Query: 423 YCEEGNIQRLLALLQEMET 441
           Y + GN++   +L  EME+
Sbjct: 665 YQKLGNMEEASSLQNEMES 683



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 165/355 (46%), Gaps = 19/355 (5%)

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
           R+ PN+     ILL L         R  FD L + N    V  +NI+ID   K G + EA
Sbjct: 164 RVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPVPN----VFTFNIVIDFLCKEGELVEA 219

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L+ ++     SP +VT+NSLI G+ K G + +  +L+  ++  G     VTY   +N 
Sbjct: 220 RALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINC 279

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           + + G +++  +   EM+ + +    VT++  +   CK+  +QEA++L   M V G+ P+
Sbjct: 280 FSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPN 339

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           + TY +++   CK   L  A  LL++M    L P   TY +++DGLC  G +  AD +L 
Sbjct: 340 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLS 399

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR------------- 589
            ++   +   ++ YTT+I  H    +  +A+    QM  KG E+ +              
Sbjct: 400 LMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQ 459

Query: 590 --DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             D  KS    M   G  P+  I   ++ A  + G       L   ++ SG  P+
Sbjct: 460 KVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPN 514



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 21/265 (7%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR------------N 62
           A+ ++ +MK   +++ +  Y +L+         W L  D KV E               N
Sbjct: 429 ALDLLNQMKNKGMELDVSLYGTLI---------WGLCKDQKVDEAKSLLHKMAGCGLRPN 479

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
               + ++D L +  +  +A+  L +     F P+VV+  A++   CK G    A   F 
Sbjct: 480 TVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFN 539

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + GL P+  +Y  LI G C  GS+ +A+   N+M   G+  D + Y+ L  G+   +
Sbjct: 540 KMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQA 599

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A+ +  K++  G   D+  YT  I G+C +  ++E   +   M+  G   +   Y+
Sbjct: 600 NLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYN 659

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAV 267
            L+    K G ++EA  L  EME+V
Sbjct: 660 CLIRKYQKLGNMEEASSLQNEMESV 684


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 158/581 (27%), Positives = 286/581 (49%), Gaps = 37/581 (6%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           + P +V + S VI+G  ++  L        E   +   P+VV+ N+I++  CK    + A
Sbjct: 83  DCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKA 142

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             +   M+K G+ PD  +YN ++HG C +G  +EA+ F   M   GVEPD +TY+ L   
Sbjct: 143 MEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDY 202

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                + + A K+   +  +G  P+I TY  L+ GY   G + E   L ++M+  G   N
Sbjct: 203 LCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 262

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              +S+L+ +  K  +++EA+ +  +M   GL P+ VTY  +I  LCK  +V  A+  + 
Sbjct: 263 HYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 322

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M  + +SP +  + +++ GLC       A      ++      + + +N +ID + K G
Sbjct: 323 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 382

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + E+ +L+  ++   + P I+T+++LI G+C  GK+ +A +LL ++   G++P  VTY+
Sbjct: 383 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYS 442

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T +N YC+   ++  L L +EME+  + P  +TY ++++GL +  +   A +L   +   
Sbjct: 443 TLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKS 502

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID----------- 526
           G   +  TYN I+   CK K    A ++   + L +L+  + T+NI+ID           
Sbjct: 503 GRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 562

Query: 527 ----------GLCVN--------------GDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
                     GL  N              G L+  D L +S++++  ++       I++ 
Sbjct: 563 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRE 622

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
               G++ +A T+   + EK F  S+   T S F  +LS G
Sbjct: 623 LLQRGEITRAGTYLSMIDEKHF--SLEASTASLFIDLLSGG 661



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 153/537 (28%), Positives = 278/537 (51%), Gaps = 3/537 (0%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA--GKEFGPSVVSLNAIMSR 107
           ++D++     P +V++ +I+++GLC ++R Q+A+  L   A  G +  P VVS + +++ 
Sbjct: 39  VFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           + K G  +     +  ML   + P+  +YN +I  LC A ++++A+E    M + GV PD
Sbjct: 98  FFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 157

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            +TY+ +  GF    Q   A   ++K+   G +PD+VTY  L+   C+ G   E  K+ +
Sbjct: 158 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 217

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M  +G K  +  Y  LL      G + E  GLL  M   G+ P+   +SIL+    KQ+
Sbjct: 218 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 277

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           KV +A+ ++++M  + ++PN+  +GA++  LC+   + +A +YF+ +I        ++YN
Sbjct: 278 KVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 337

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I G         A +L  +++++ I  + + FNS+I   CK G+V ++ +L D +   
Sbjct: 338 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 397

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G++P  +TY+T ++ YC  G +     LL  M +  + P  VTY+ +I G CK  ++++A
Sbjct: 398 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDA 457

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           + L  +M   GV+PD ITYN I++   + +    A +L   +     +   +TYNI++ G
Sbjct: 458 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHG 517

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           LC N    +A  +  +L   ++ L    +  +I A    G   +A   F      G 
Sbjct: 518 LCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 574



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 247/480 (51%), Gaps = 3/480 (0%)

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE--PDAITYS 172
           E A+ +F  +L+ G+ PD FSYNIL++GLC     +EALE  + M   G +  PD ++YS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            +  GF     +   +    ++L +   P++VTY  +I   C+   V++ +++   M+  
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   + + Y+ ++   C SG+  EA+  L +M + G++PD+VTY+ L+  LCK  +  +A
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            ++++ M  + + P    +G +L G   K  + E     D ++ +    +  +++I++  
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           Y K   + EA+ ++ ++ ++ ++P+ VT+ ++I   CK+G+V DA    + +   GL P 
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 332

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            + Y + ++  C     +R   L+ EM  + I    + +  +I   CK+ ++ E+ +L +
Sbjct: 333 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 392

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            M  IGV PD ITY+T+I  +C    + +A +LL  M    ++P   TY+ LI+G C   
Sbjct: 393 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKIS 452

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            +K+A  L   ++   +S   + Y  I++          A   +  + + G ++ +  Y 
Sbjct: 453 RMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYN 512



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 247/543 (45%), Gaps = 42/543 (7%)

Query: 25  LDLKVS--IQTYNSLLYNLRHTDI----MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSR 78
           LD ++S  + TYNS++  L         M  L   +K    P  +  NSIV  G C   +
Sbjct: 115 LDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIV-HGFCSSGQ 173

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
            ++AI+FL++       P VV+ N++M   CK G    A+ +F  M K GL P+  +Y  
Sbjct: 174 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGT 233

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           L+ G    G++ E     + M R+G+ P+   +SIL   +    ++  A  V  K+  +G
Sbjct: 234 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 293

Query: 199 SDPDIVTYTVLICGYCQIGNVE-----------EGLKLREV------------------- 228
            +P+ VTY  +I   C+ G VE           EGL    +                   
Sbjct: 294 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 353

Query: 229 -----MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
                ML +G  LN I ++ ++ S CK GR+ E+  L   M  +G+KPD++TYS LI G 
Sbjct: 354 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 413

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           C   K+ +A +L   M S  + P+   +  ++ G C+   + +A + F  +  S    D+
Sbjct: 414 CLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDI 473

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           + YNI++ G  +      A +LY  + +      + T+N +++G CKN    DA R+   
Sbjct: 474 ITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQN 533

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           + L  L+  A T+   ++A  + G       L     +  + P + TY ++ + +  Q  
Sbjct: 534 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 593

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           L+E  QL   M   G T D    N I+R   +  ++ +A   L+ +   +    ++T ++
Sbjct: 594 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASL 653

Query: 524 LID 526
            ID
Sbjct: 654 FID 656



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 224/508 (44%), Gaps = 39/508 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL----YNLRHTDI--------------- 46
           +  +G   +A+  + KM+   ++  + TYNSL+     N R T+                
Sbjct: 168 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227

Query: 47  -------------------MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
                              M  L D +  +    N Y  SI++    +Q ++++A+L   
Sbjct: 228 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 287

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           +   +   P+ V+  A++   CK G  E A   F  M+  GL P    YN LIHGLC   
Sbjct: 288 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 347

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
             E A E   +M   G+  + I ++ +        ++  + K+   ++  G  PDI+TY+
Sbjct: 348 KWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 407

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            LI GYC  G ++E  KL   M+S G K + + YS L++  CK  R+ +AL L  EME+ 
Sbjct: 408 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESS 467

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G+ PD++TY+I+++GL +  +   A +LY  +           +  IL GLC+ ++  +A
Sbjct: 468 GVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDA 527

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F +L + +   +   +NIMID  +K+G   EA  L+       + P+  T+  +   
Sbjct: 528 LRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 587

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
               G + +  +L  +++ +G    +      +    + G I R    L  ++ K     
Sbjct: 588 IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLE 647

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
             T ++ I  L    K QE  + L + Y
Sbjct: 648 ASTASLFID-LLSGGKYQEYHRFLPEKY 674



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 194/405 (47%), Gaps = 6/405 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y++   V +A+ V +KM++  L  +  TY +++  L    R  D M      I  
Sbjct: 268 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 327

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
             +P N+  NS+ I GLC  ++ + A   + E   +    + +  N+I+  +CK G    
Sbjct: 328 GLSPGNIVYNSL-IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 386

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           ++ LF LM++ G+ PD  +Y+ LI G C+AG M+EA +    M   G++PD +TYS L  
Sbjct: 387 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLIN 446

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+  +S++  A  + +++   G  PDI+TY +++ G  Q        +L   +   G +L
Sbjct: 447 GYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQL 506

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +  Y+++L  +CK+   D+AL +   +  + LK +  T++I+I  L K  +  +A  L+
Sbjct: 507 ELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 566

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
               S  + PN + +  +   +  + ++ E    F S+  + C  D  + N ++   ++ 
Sbjct: 567 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 626

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           G I  A      + EK  S    T  SL       GK  +  R L
Sbjct: 627 GEITRAGTYLSMIDEKHFSLEAST-ASLFIDLLSGGKYQEYHRFL 670


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 176/648 (27%), Positives = 300/648 (46%), Gaps = 52/648 (8%)

Query: 22  MKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
           MK+ +L   ++T ++LL  L    R  D++  L+DDI  +    ++Y  S V+  LC+  
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLL-LFDDIVSANVQPDIYIYSAVVRSLCELK 145

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK--------------------------L 111
               A   +      +   S+V  N ++   CK                           
Sbjct: 146 DFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY 205

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G    A+ LF  M + GL  +  +Y+ILI   C  G M+ A+ F + M +  +E     Y
Sbjct: 206 GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPY 265

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + L  G+  L   S A     +++ KG  P +VTYT LI GYC  G   +  K+   M +
Sbjct: 266 NSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTA 325

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +G   N   ++ ++S +C++  + EA+ L  EM+   + P  VTY+++I G C+   + +
Sbjct: 326 KGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISE 385

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A  L +EM  K   P+++ +  ++ GLC    ++EA+ + D L   +   + + Y+ ++ 
Sbjct: 386 AFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVH 445

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           GY K G   +AV   R ++E+ ++  +V +  LI G  +         LL  +  HGL P
Sbjct: 446 GYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRP 505

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
            AV YT  ++ + + GN++    L   M  +   P  VTYT +I GLCK   + +A  L 
Sbjct: 506 DAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLS 565

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
           ++  V  VTP+ ITY   +    +  ++ KA QL + M L     T+ +YNILI G C  
Sbjct: 566 KETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM-LKGFLATTVSYNILIRGFCRL 624

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           G ++ A  LL  + +++I    + Y+TII   C   ++ +A+  +  M++KG +      
Sbjct: 625 GKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLK------ 678

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                         PD      ++      G+L   FEL   MI+ G+
Sbjct: 679 --------------PDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGM 712



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 162/595 (27%), Positives = 277/595 (46%), Gaps = 25/595 (4%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T S +++GL +  R  D +L   +       P +   +A++   C+L     AK +  
Sbjct: 96  VRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIH 155

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M           YN+LIHGLC +  + EALE  N + + G+E + +TY           
Sbjct: 156 WMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY---------YG 206

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           + + A  + +++  KG   + +TY++LI  +C+ G ++  +   + M     +  V  Y+
Sbjct: 207 KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYN 266

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++  CK G    A     EM   GL P +VTY+ LI G C + + HKA ++YNEM +K
Sbjct: 267 SLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAK 326

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            ISPN++   AI+ GLC   M+ EA   F  +     +   V YN+MI+G+ + GNI EA
Sbjct: 327 GISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEA 386

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L  +++ K   P   T+  LI G C  G+V++A+  +D +     + + + Y+  ++ 
Sbjct: 387 FHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHG 446

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC+EG  +  ++  + M  + +    V Y ++I G  ++   +    LL++M+  G+ PD
Sbjct: 447 YCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPD 506

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            + Y  +I    K  +L++AF L + M      P   TY  LI+GLC  G +  A+ L  
Sbjct: 507 AVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSK 566

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF-------EISIRDYTK-- 593
                +++   + Y   +      G++ KA+     M+ KGF        I IR + +  
Sbjct: 567 ETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLG 625

Query: 594 ------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                      M  N   PD      ++    +  +L    +L   M+  GL PD
Sbjct: 626 KIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPD 680



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/486 (26%), Positives = 238/486 (48%), Gaps = 10/486 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL------LYNLRHTDIMWDLYDDIKVSET 59
           + R G + +A+  + KM +  ++ ++  YNSL      L N       +D   D  ++ T
Sbjct: 237 FCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPT 296

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
              V T + +I G C +     A     E   K   P+  +  AI+S  C+      A  
Sbjct: 297 ---VVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIR 353

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  M +  + P   +YN++I G C +G++ EA    ++M   G  PD  TY  L  G  
Sbjct: 354 LFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLC 413

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
            + ++S A + +  L       + + Y+ L+ GYC+ G  ++ +    VM+ +G  ++++
Sbjct: 414 SVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLV 473

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y++L+    +        GLL EM   GL+PD V Y+ +I    K   + +A  L++ M
Sbjct: 474 CYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIM 533

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             +   PN   + A++ GLC+  ++ +A +     ++S+   + + Y   +D   + GN+
Sbjct: 534 VDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNM 593

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +AVQL+  ++ K    + V++N LI GFC+ GK+ +A +LL  +  + + P  +TY+T 
Sbjct: 594 EKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTI 652

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +   C+  N+Q  + L   M  K + P  + Y+ ++ G C   +L++A +L ++M   G+
Sbjct: 653 IYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGM 712

Query: 480 TPDQIT 485
             + +T
Sbjct: 713 RSNHVT 718



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 224/457 (49%), Gaps = 24/457 (5%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P++ T + L+ G  +     + L L + ++S   + ++  YS ++ S+C+    ++A  +
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           ++ ME    K  +V Y++LI GLCK  ++ +A+++ N +  K +  N   +         
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG------- 206

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
                EA + F  +       + + Y+I+ID + + G +  A+    ++ +  I  ++  
Sbjct: 207 --KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYP 264

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +NSLI G+CK G  + A+   D +   GL P+ VTYT+ ++ YC EG   +   +  EM 
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            K I P   T+T +I GLC+   + EA++L  +M    + P ++TYN +I   C+  ++ 
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNIS 384

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +AF LL++M      P + TY  LI GLC  G +  A   +  L + +  L  + Y+ ++
Sbjct: 385 EAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALV 444

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDY------------TKSFFCM---MLSNGFP 605
             +C EG    A++    MVE+G  + +  Y            T++ F +   M ++G  
Sbjct: 445 HGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLR 504

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           PD  I   M+    + G+L   F L  +M+  G LP+
Sbjct: 505 PDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPN 541



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 26/330 (7%)

Query: 332 DSLIMSNC--IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
           DS +M +C  + +V   + +++G ++     + + L+  ++   + P I  +++++   C
Sbjct: 83  DSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLC 142

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           +      A+ ++  ++ +  + S V Y   ++  C+   I   L +   +  K +    V
Sbjct: 143 ELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVV 202

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY           K  EA  L ++M   G+  + ITY+ +I SFC+  ++  A   L++M
Sbjct: 203 TY---------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKM 253

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
              ++E T   YN LI+G C  G+   A      + +  ++ T V YT++I  +C EG+ 
Sbjct: 254 TKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEW 313

Query: 570 HKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVM 614
           HKA   + +M  KG   +   +T                  F  M      P +    VM
Sbjct: 314 HKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVM 373

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           +    + G++   F L   M+  G +PD +
Sbjct: 374 IEGHCRSGNISEAFHLLDEMVGKGFVPDTY 403


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 251/493 (50%), Gaps = 2/493 (0%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL--MLKYGLHPDAFS 135
           +L DAI            PS+   N ++S   K+   ++   L  L  M+K G  P   +
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
            + L++G C    + +A+   + M   G  PD IT++ L  G  L ++ S A  ++ +++
Sbjct: 82  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
            +G  P++VTY V++ G C+ G+++    L   M +   + +V+ ++ ++ S+CK   +D
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           +AL L  EME  G++P++VTYS LI  LC   +   A QL ++M  K+I+PN     A++
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
               ++    EA    D +I  +   D+  YN +I+G+     + +A Q++  ++ K   
Sbjct: 262 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 321

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P + T+N+LI GFCK+ +V D   L   +   GL    VTYTT +     +G+      +
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 381

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
            ++M +  + P  +TY++++ GLC   KL++A+++ + M    +  D   Y T+I   CK
Sbjct: 382 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 441

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              +   + L   + L  ++P   TYN +I GLC    L+ A  LL  ++E         
Sbjct: 442 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 501

Query: 556 YTTIIKAHCAEGD 568
           Y T+I+AH  +GD
Sbjct: 502 YNTLIRAHLRDGD 514



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 247/535 (46%), Gaps = 52/535 (9%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE--ALEFTNDMGRHGVEPDAITYSIL 174
           A GLF  M+K    P  F +N L+  +      +   +L     M + G EP  +T S L
Sbjct: 26  AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSL 85

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G+    +IS A  ++ +++  G  PD +T+T LI G        E + L + M+ +G 
Sbjct: 86  LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 145

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           + N++ Y V+++ +CK G ID A  LL +MEA  ++ D+V ++ +I  LCK   V  A+ 
Sbjct: 146 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 205

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L+ EM +K I PN                                   VV Y+ +I    
Sbjct: 206 LFKEMETKGIRPN-----------------------------------VVTYSSLISCLC 230

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
             G   +A QL   +IEK+I+P++VTFN+LI  F K GK  +A +L D +    ++P   
Sbjct: 231 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 290

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TY + +N +C    + +   + + M +K   P   TY  +IKG CK  ++++  +L  +M
Sbjct: 291 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 350

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+  D +TY T+I+      D   A ++  QM    + P   TY+IL+DGLC NG L
Sbjct: 351 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 410

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK- 593
           + A  +   +Q+  I L    YTT+I+  C  G V      FC +  KG + ++  Y   
Sbjct: 411 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 470

Query: 594 -SFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
            S  C              M  +G  PD      ++ A  + GD  +  EL   M
Sbjct: 471 ISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 232/473 (49%), Gaps = 39/473 (8%)

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           + PS+V+L+++++ YC       A  L   M++ G  PD  ++  LIHGL +     EA+
Sbjct: 75  YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 134

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
              + M + G +P+ +TY ++  G      I  A+ ++ K+     + D+V +  +I   
Sbjct: 135 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 194

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+  +V++ L L + M ++G + NV+ YS L+S +C  GR  +A  LL +M    + P+L
Sbjct: 195 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 254

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VT++ LI    K+ K  +A +L+++M  + I P+ F + +++ G C  + + +A+  F+ 
Sbjct: 255 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 314

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR-------------------------- 367
           ++  +C  D+  YN +I G+ K   + +  +L+R                          
Sbjct: 315 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 374

Query: 368 ---------QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
                    Q++   + P I+T++ L+ G C NGK+  A  + D ++   ++     YTT
Sbjct: 375 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 434

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +   C+ G +     L   +  K + P  VTY  +I GLC +  LQEA  LL+ M   G
Sbjct: 435 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQM----WLHNLEPTSATYNILIDG 527
             PD  TYNT+IR+  +  D   + +L+ +M    ++ +        N+L DG
Sbjct: 495 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 547



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 216/459 (47%), Gaps = 17/459 (3%)

Query: 201 PDIVTYTVLICGYCQIGNVEE--GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
           P I  +  L+    ++   +    L L   M+  G++ +++  S LL+  C   RI +A+
Sbjct: 40  PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 99

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L+ +M  +G +PD +T++ LI GL   +K  +A+ L + M  +   PN   +G ++ GL
Sbjct: 100 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 159

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++  I  A    + +  +    DVV++N +ID   K  ++ +A+ L++++  K I P++
Sbjct: 160 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 219

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VT++SLI   C  G+ +DA +LL  +    + P+ VT+   ++A+ +EG       L  +
Sbjct: 220 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 279

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M  ++I P   TY  +I G C   +L +A Q+ E M      PD  TYNT+I+ FCK K 
Sbjct: 280 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 339

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           +    +L  +M    L   + TY  LI GL  +GD  NA  +   +    +    + Y+ 
Sbjct: 340 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 399

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNG 603
           ++   C  G + KA+  F  M +   ++ I  YT                  FC +   G
Sbjct: 400 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 459

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             P+      M+        L   + L   M + G LPD
Sbjct: 460 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 498



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 211/439 (48%), Gaps = 3/439 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y     + DAV ++ +M E+  +    T+ +L++ L           L D +       N
Sbjct: 89  YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 148

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T  +V++GLC++  +  A   L +    +    VV  N I+   CK    + A  LF 
Sbjct: 149 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 208

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G+ P+  +Y+ LI  LC  G   +A +  +DM    + P+ +T++ L   F    
Sbjct: 209 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 268

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A K+   ++ +  DPDI TY  LI G+C    +++  ++ E M+S+    ++  Y+
Sbjct: 269 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 328

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   CKS R+++   L  EM   GL  D VTY+ LI+GL        A +++ +M S 
Sbjct: 329 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 388

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   +  +L GLC    + +A   FD +  S    D+ +Y  MI+G  K G + + 
Sbjct: 389 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 448

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L+  L  K + P++VT+N++I G C    + +A  LL  +K  G  P + TY T + A
Sbjct: 449 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 508

Query: 423 YCEEGNIQRLLALLQEMET 441
           +  +G+      L++EM +
Sbjct: 509 HLRDGDKAASAELIREMRS 527



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 184/436 (42%), Gaps = 57/436 (13%)

Query: 247 SMCKSGRIDEALG-------------------------------------LLYEMEAVGL 269
           S  K  ++D+A+G                                     LL +M  +G 
Sbjct: 16  SWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGY 75

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           +P +VT S L+ G C   ++  A+ L ++M      P++     ++ GL      +EA  
Sbjct: 76  EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             D ++   C  ++V Y ++++G  K G+I  A  L  ++   +I   +V FN++I   C
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K   V DA  L   ++  G+ P+ VTY++ ++  C  G       LL +M  K I P  V
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           T+  +I    K+ K  EA +L +DM    + PD  TYN++I  FC    L KA Q+   M
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 315

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
              +  P   TYN LI G C +  +++   L   +    +    V YTT+I+    +GD 
Sbjct: 316 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 375

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
             A   F QMV                    S+G PPD     ++L      G L    E
Sbjct: 376 DNAQKVFKQMV--------------------SDGVPPDIMTYSILLDGLCNNGKLEKALE 415

Query: 630 LAAVMIKSGLLPDKFL 645
           +   M KS +  D ++
Sbjct: 416 VFDYMQKSEIKLDIYI 431



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 147/323 (45%), Gaps = 9/323 (2%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTN 66
           G   DA  +++ M E  +  ++ T+N+L+          +   L+DD+       +++T 
Sbjct: 233 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 292

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I+G C   RL  A    +    K+  P + + N ++  +CK    E    LF  M  
Sbjct: 293 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 352

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL  D  +Y  LI GL   G  + A +    M   GV PD +TYSIL  G     ++  
Sbjct: 353 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 412

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +V   +       DI  YT +I G C+ G V++G  L   +  +G K NV+ Y+ ++S
Sbjct: 413 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 472

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C    + EA  LL +M+  G  PD  TY+ LIR   +      + +L  EM S R   
Sbjct: 473 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR--- 529

Query: 307 NSFAHGAILLGLCEKEMITEARM 329
             F   A  +GL    M+ + R+
Sbjct: 530 --FVGDASTIGLVA-NMLHDGRL 549


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/466 (30%), Positives = 246/466 (52%), Gaps = 7/466 (1%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P    +N ++  L        A+     M   G+EPD  T +IL   F  L Q++ ++ V
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           + K+L  G  P+ +T   L+ G C  G V++ L   + +++QGF+++ ++Y+ LL+ +CK
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G    AL LL  +E    +P++V Y+ +I GLCK   V++A  LY+EM ++ I PN   
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C    + EA    + +I+ N   +V  Y I++D   K G + EA  L   + 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           ++ + P++V++N+L+ G+C  G+V +A+++  T+   G+ P+  +Y   ++  C+   + 
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             + LL+E+  K + P  VTY+ +I G CK  ++  A+ LL++MY  G   D +TY +++
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
            + CK ++L KA  L  +M    ++P   TY  LIDGLC  G  KNA  L   L      
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIR 589
           +    Y  +I   C EG + +A+    +M E G       FEI IR
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIR 473



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 252/496 (50%), Gaps = 1/496 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P ++  N I+    K+     A  LF  M   G+ PD F+ NILI+  C  G M  +   
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              + + G +P+ IT + L KG  L  ++  +     K++ +G   D V+Y  L+ G C+
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           IG     LKL  ++  +  + NV+ Y+ ++  +CK   ++EA  L  EM+A G+ P+++T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           YS LI G C   ++ +A  L NEM  K I+PN + +  ++  LC++  + EA+     + 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 +VV YN ++DGY  +G +  A Q++  +++K ++P++ ++N +I   CK+ +V 
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  LL  +    + P+ VTY++ ++ +C+ G I   L LL+EM  +      VTYT ++
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             LCK   L +A  L   M   G+ P++ TY  +I   CK    + A +L   + +    
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
               TYN++I GLC  G L  A  +   ++E+      V +  II++   +    KA   
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKL 487

Query: 576 FCQMVEKGFEISIRDY 591
             +M+ K   +  RD+
Sbjct: 488 LHEMIAKDL-LRFRDF 502



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 146/473 (30%), Positives = 248/473 (52%), Gaps = 1/473 (0%)

Query: 56  VSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
           V +TP  +  N IV   L +      AI   ++   K   P + +LN +++ +C LG   
Sbjct: 4   VRDTPPIMEFNKIV-GSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMT 62

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            +  +   +LK G  P+  + N L+ GLC+ G ++++L F + +   G + D ++Y+ L 
Sbjct: 63  FSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLL 122

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            G   + +   A K+++ +  + + P++V Y  +I G C+   V E   L   M ++G  
Sbjct: 123 NGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF 182

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            NVI YS L+   C +G++ EA GLL EM    + P++ TY+IL+  LCK+ KV +A  L
Sbjct: 183 PNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNL 242

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
              M  + + PN  ++  ++ G C    +  A+  F +++      +V  YNIMID   K
Sbjct: 243 LAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCK 302

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
              + EA+ L R+++ K + P+ VT++SLI GFCK G++  A  LL  +   G     VT
Sbjct: 303 SKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVT 362

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           YT+ ++A C+  N+ +  AL  +M+ + I P   TYT +I GLCK  + + A +L + + 
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLL 422

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           V G   +  TYN +I   CK   L +A  + ++M  +   P + T+ I+I  L
Sbjct: 423 VKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSL 475



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 238/467 (50%), Gaps = 22/467 (4%)

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           LL++ + P I+ +  ++    ++ +    + L + M  +G + ++   ++L++  C  G+
Sbjct: 2   LLVRDTPP-IMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +  +  +L ++  +G +P+ +T + L++GLC + +V K++  ++++ ++    +  ++  
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120

Query: 314 ILLGLCEKEMITEARMYFDSLIM---SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +L GLC+   I E R     L M    +   +VV+YN +IDG  K   + EA  LY ++ 
Sbjct: 121 LLNGLCK---IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMD 177

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            + I P+++T+++LIYGFC  G++ +A  LL+ + L  + P+  TYT  M+A C+EG ++
Sbjct: 178 ARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVK 237

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               LL  M  + + P  V+Y  ++ G C   ++Q A Q+   M   GV P+  +YN +I
Sbjct: 238 EAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMI 297

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CK K + +A  LL ++   N+ P + TY+ LIDG C  G + +A  LL  +      
Sbjct: 298 DRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQP 357

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSF 595
              V YT+++ A C   ++ KA   F +M E+G + +   YT               +  
Sbjct: 358 ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKL 417

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           F  +L  G   +     VM+    + G L     + + M ++G +PD
Sbjct: 418 FQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPD 464



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 199/389 (51%), Gaps = 3/389 (0%)

Query: 13  HDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDG 72
           HD V  +A+  ++D +VS  T  + L  +  T     L   I+   T  NV   + +IDG
Sbjct: 103 HDKV--VAQGFQMD-QVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDG 159

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           LC+   + +A     E   +   P+V++ + ++  +C  G    A GL   M+   ++P+
Sbjct: 160 LCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPN 219

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
            ++Y IL+  LC  G ++EA      M + GV+P+ ++Y+ L  G+ L+ ++  A ++  
Sbjct: 220 VYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFH 279

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
            ++ KG +P++ +Y ++I   C+   V+E + L   +L +    N + YS L+   CK G
Sbjct: 280 TMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLG 339

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           RI  AL LL EM   G   D+VTY+ L+  LCK   + KA  L+ +M  + I PN + + 
Sbjct: 340 RITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYT 399

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           A++ GLC+      A+  F  L++  C  +V  YN+MI G  K G + EA+ +  ++ E 
Sbjct: 400 ALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEEN 459

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLL 401
              P  VTF  +I    +  +   A +LL
Sbjct: 460 GCIPDAVTFEIIIRSLFEKDQNDKAEKLL 488



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 191/368 (51%), Gaps = 3/368 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G    A+ ++  +++   + ++  YN+++  L   +  +  +DLY ++       NV 
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S +I G C   +L +A   L E   K   P+V +   +M   CK G  + AK L  +M
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K G+ P+  SYN L+ G C+ G ++ A +  + M + GV P+  +Y+I+        ++
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRV 306

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +++++L K   P+ VTY+ LI G+C++G +   L L + M  +G   +V+ Y+ L
Sbjct: 307 DEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSL 366

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L ++CK+  +D+A  L  +M+  G++P+  TY+ LI GLCK  +   A +L+  +  K  
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGC 426

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             N + +  ++ GLC++ M+ EA      +  + CI D V + I+I    +     +A +
Sbjct: 427 RINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEK 486

Query: 365 LYRQLIEK 372
           L  ++I K
Sbjct: 487 LLHEMIAK 494



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 181/343 (52%), Gaps = 38/343 (11%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           +  +V++A  + ++M    +  ++ TY++L+Y       + +   L +++ +     NVY
Sbjct: 162 KDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVY 221

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I++D LC++ ++++A   L     +   P+VVS N +M  YC +G  + AK +F  M
Sbjct: 222 TYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTM 281

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G++P+ +SYNI+I  LC +  ++EA+    ++    + P+ +TYS L  GF  L +I
Sbjct: 282 VQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRI 341

Query: 185 SGAWKVIQKLLIKGSDPDIVTYT-----------------------------------VL 209
           + A  +++++  +G   D+VTYT                                    L
Sbjct: 342 TSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTAL 401

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G C+ G  +   KL + +L +G ++NV  Y+V++S +CK G +DEAL +  +ME  G 
Sbjct: 402 IDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGC 461

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            PD VT+ I+IR L ++D+  KA +L +EM +K +      HG
Sbjct: 462 IPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRDFHG 504



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 126/290 (43%), Gaps = 15/290 (5%)

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
           R +P I+ FN ++    K      A  L   +++ G+EP   T    +N +C  G +   
Sbjct: 5   RDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFS 64

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             +L ++      P  +T   ++KGLC + ++++++   + +   G   DQ++Y T++  
Sbjct: 65  FTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNG 124

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            CK  + R A +LL  +   +  P    YN +IDGLC +  +  A  L   +    I   
Sbjct: 125 LCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPN 184

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFC 597
            + Y+T+I   C  G + +A     +M+ K    ++  YT               K+   
Sbjct: 185 VITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLA 244

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +M   G  P+      ++  +   G++ +  ++   M++ G+ P+ +  N
Sbjct: 245 VMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYN 294



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 58/118 (49%)

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M ++  TP  + +N I+ S  K K    A  L  QM +  +EP   T NILI+  C  G 
Sbjct: 1   MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           +  +  +L  + +       +   T++K  C +G+V K++ F  ++V +GF++    Y
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSY 118


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 263/518 (50%), Gaps = 40/518 (7%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGL----CQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           +L+D++ +S    +V + SIV D L    C+  R  +A         K   P + + N +
Sbjct: 140 ELFDELTLSRDRLSVKS-SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDM 198

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +S + KL   E+A  L+  M +  +    +++NI+++ LC  G +++A EF   M     
Sbjct: 199 LSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFM----- 253

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
                      +G                    G  P++V+Y  +I GY   GN+E   +
Sbjct: 254 -----------EGL-------------------GFKPNVVSYNTIIHGYSSRGNIEGARR 283

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           + + M  +G + +   Y  L+S MCK GR++EA GL  +M  +GL P+ VTY+ LI G C
Sbjct: 284 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC 343

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
            +  + +A    +EM  K I P+   +  ++  L  +  + EA      +     I D +
Sbjct: 344 NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 403

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            YNI+I+GY + GN  +A  L+ +++ K I P+ VT+ SLIY   +  ++ +A  L + I
Sbjct: 404 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 463

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G+ P  + +   ++ +C  GN++R   LL+EM+ K++ P  VT+  +++G C++ K+
Sbjct: 464 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 523

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           +EA  LL++M   G+ PD I+YNT+I  + +  D++ AF++ ++M      PT  TYN L
Sbjct: 524 EEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNAL 583

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
           I  LC N +   A+ LL  +    IS     Y ++I+ 
Sbjct: 584 IKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 621



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 152/472 (32%), Positives = 244/472 (51%), Gaps = 38/472 (8%)

Query: 22  MKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSR 78
           MKE  +   I+T N   SL   L   ++ W LY ++        VYT +I+++ LC++ +
Sbjct: 183 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 242

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L+ A         +EF                +GF E   GL       G  P+  SYN 
Sbjct: 243 LKKA---------REF----------------IGFME---GL-------GFKPNVVSYNT 267

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           +IHG    G++E A    + M   G+EPD+ TY  L  G     ++  A  +  K++  G
Sbjct: 268 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 327

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P+ VTY  LI GYC  G++E     R+ M+ +G   +V  Y++L+ ++   GR+ EA 
Sbjct: 328 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD 387

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            ++ EM   G+ PD +TY+ILI G  +     KA  L+NEM SK I P    + +++  L
Sbjct: 388 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 447

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
             +  + EA   F+ ++      DV+++N M+DG+   GN+  A  L +++  K + P  
Sbjct: 448 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDE 507

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VTFN+L+ G C+ GKV +AR LLD +K  G++P  ++Y T ++ Y   G+I+    +  E
Sbjct: 508 VTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDE 567

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           M +    PT +TY  +IK LCK  +   A +LL++M   G++PD  TY ++I
Sbjct: 568 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 619



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 251/503 (49%), Gaps = 21/503 (4%)

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           + G  IA + E   E T    R  V+  +I + +L +    L +   A+K    +  KG 
Sbjct: 130 VMGTRIATNRELFDELTLSRDRLSVK-SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGI 188

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            P I T   ++  + ++  +E    L   M        V  ++++++ +CK G++ +A  
Sbjct: 189 VPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKARE 248

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
            +  ME +G KP++V+Y+ +I G   +  +  A ++ + M  K I P+S+ +G+++ G+C
Sbjct: 249 FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMC 308

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           ++  + EA   FD ++    + + V YN +IDGY   G++  A     ++++K I PS+ 
Sbjct: 309 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS 368

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T+N L++     G++ +A  ++  ++  G+ P A+TY   +N Y   GN ++   L  EM
Sbjct: 369 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 428

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
            +K I PTHVTYT +I  L ++ +++EA  L E +   GV+PD I +N ++   C   ++
Sbjct: 429 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV 488

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
            +AF LL +M   ++ P   T+N L+ G C  G ++ A  LL  ++   I    ++Y T+
Sbjct: 489 ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTL 548

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
           I  +   GD+  A     +M+  GF  ++  Y     C+            C+      +
Sbjct: 549 ISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCL------------CK------N 590

Query: 620 QGGDLGSVFELAAVMIKSGLLPD 642
           Q GDL    EL   M+  G+ PD
Sbjct: 591 QEGDLAE--ELLKEMVNKGISPD 611



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 169/360 (46%), Gaps = 40/360 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDD-IKVSETPR 61
           YS  G +  A  ++  M+   ++    TY SL+  +     + +   L+D  +++   P 
Sbjct: 272 YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP- 330

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T + +IDG C +  L+ A  +  E   K   PSV + N ++      G    A  + 
Sbjct: 331 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI 390

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M K G+ PDA +YNILI+G    G+ ++A +  N+M   G+EP  +TY+ L       
Sbjct: 391 KEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRR 450

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           +++  A  + +K+L +G  PD++ +  ++ G+C  GNVE    L + M  +    + + +
Sbjct: 451 NRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 510

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPD----------------------------- 272
           + L+   C+ G+++EA  LL EM+  G+KPD                             
Sbjct: 511 NTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 570

Query: 273 ------LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
                 L+TY+ LI+ LCK  +   A +L  EM +K ISP+   + +++ G+   + + E
Sbjct: 571 IGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 163/368 (44%), Gaps = 44/368 (11%)

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           E  S  ++P   ++  +L  LC K  +      F   +  +C+ D   Y + +    +L 
Sbjct: 65  EQVSPNLTPALISN--VLYNLCSKPQLVSD---FIHHLHPHCL-DTKSYCLAVVLLARLP 118

Query: 358 NIGEAVQLYRQLIEKRIS------------------PSIVTFNSLIYGFCKNGKVADARR 399
           +   A+QL +Q++  RI+                   S + F+ L+   C+  +  +A +
Sbjct: 119 SPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFK 178

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
               +K  G+ P   T    ++ + +   ++    L  EM    I  T  T+ +++  LC
Sbjct: 179 CFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLC 238

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K+ KL++A + +  M  +G  P+ ++YNTII  +    ++  A ++L+ M +  +EP S 
Sbjct: 239 KEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 298

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TY  LI G+C  G L+ A  L   + E  +    V Y T+I  +C +GD+ +A ++  +M
Sbjct: 299 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 358

Query: 580 VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
           V+KG   S+  Y                     +++ A    G +G   ++   M K G+
Sbjct: 359 VKKGIMPSVSTYN--------------------LLVHALFMEGRMGEADDMIKEMRKKGI 398

Query: 640 LPDKFLIN 647
           +PD    N
Sbjct: 399 IPDAITYN 406


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 149/465 (32%), Positives = 251/465 (53%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  + +IV+  LCQ  ++++A   L +   +   P VVS   ++S YC++G  +    L 
Sbjct: 241 NTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLV 300

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +   GL PD + YN +I  LC  G + EA +    M + GV PD + Y+ +  GF  L
Sbjct: 301 DELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKL 360

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +S A K+  ++  K   PDIVTYT +I G C+ G + E  ++   ML +G + + + Y
Sbjct: 361 GNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTY 420

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   CK+G + EA  +  +M   GL P++VTY+ L  GLCK  ++  A +L +EM  
Sbjct: 421 TALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSR 480

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K + PN + +  I+ GLC+   I +     + + ++    D + Y  ++D Y K+G + +
Sbjct: 481 KGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAK 540

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +L R ++ KR+ P++VTFN L+ GFC +G + D  RL++ +   G+ P+A T+ + M 
Sbjct: 541 AHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMK 600

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC + N++    + + M  + + P   TY ++IKG CK   ++EA  L ++M   G + 
Sbjct: 601 QYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSV 660

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
              TY+ +IR F K K   +A +L  +M  H L      Y+I +D
Sbjct: 661 TAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVD 705



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 280/535 (52%), Gaps = 16/535 (2%)

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGL-CIAGSMEEALEFTNDMGRHGVEPDAIT 170
           GF   A+ LF  +L+YG+     S N+ +  L C    ++ A++   +    GV  + ++
Sbjct: 185 GFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVS 244

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
            +I+      L ++  A  ++ ++  +G+ PD+V+Y V++ GYC+IG +++ LKL + + 
Sbjct: 245 CNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELK 304

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +G K +   Y+ ++  +CK+G + EA  LL  M   G+ PD V Y+ +I G CK   V 
Sbjct: 305 GKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVS 364

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A +L++EM  K+I P+   + +++ G+C+   + EAR  F+ +++     D V Y  +I
Sbjct: 365 AACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALI 424

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           DGY K G + EA  ++ Q+++K ++P++VT+ +L  G CKNG++  A  LL  +   GL+
Sbjct: 425 DGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQ 484

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+  TY T +N  C+ GNI++ + L++EM+     P  +TYT ++   CK  ++ +A +L
Sbjct: 485 PNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHEL 544

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L  M    + P  +T+N ++  FC    L    +L+  M    + P + T+N L+   C+
Sbjct: 545 LRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCI 604

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
             +++    +  ++ +  +      Y  +IK HC   ++ +A     +MVEKG+ ++   
Sbjct: 605 KNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAAT 664

Query: 591 Y---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
           Y                +  F  M  +G   +++I ++ +   ++ G+     EL
Sbjct: 665 YDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLEL 719



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 203/393 (51%), Gaps = 3/393 (0%)

Query: 60  PRNV-YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           P NV YT   VI G C+   +  A     E   K+  P +V+  +++   CK G    A+
Sbjct: 345 PDNVVYTT--VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAR 402

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  ML  GL PD  +Y  LI G C AG M+EA    N M + G+ P+ +TY+ LA G 
Sbjct: 403 EMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGL 462

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               +I  A +++ ++  KG  P++ TY  ++ G C+IGN+E+ +KL E M   GF  + 
Sbjct: 463 CKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDT 522

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           I Y+ L+ + CK G + +A  LL  M    L+P LVT+++L+ G C    +    +L   
Sbjct: 523 ITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEW 582

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  K I PN+    +++   C K  +      + ++     + D   YNI+I G+ K  N
Sbjct: 583 MLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARN 642

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EA  L+++++EK  S +  T+++LI GF K  K  +AR+L + ++ HGL      Y  
Sbjct: 643 MKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDI 702

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           F++   EEGN +  L L  E  T+  G   V Y
Sbjct: 703 FVDVNYEEGNWEITLELCDEFMTELSGTIFVVY 735


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 245/463 (52%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  +L+    P    +  ++  L  +      L     M   G++P+ + ++IL  
Sbjct: 54  AVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILIN 113

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F  L  I  A+ V+ K+L  G +PD +T    I G+C  G + + L   + +++ GF L
Sbjct: 114 CFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 173

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + ++Y  L++ +CK G    AL LL  ++   ++ D+V YS +I  +CK   V+ A  LY
Sbjct: 174 DQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLY 233

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           +EM S+RIS N   + A++ G C    + +A   F+ +   N   DV  +NI++D + K 
Sbjct: 234 SEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKE 293

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G + EA      ++++ I P IVT+NSL+ G+C   +V  A+ +L+T+   G+  +  +Y
Sbjct: 294 GRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSY 353

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              +N +C+   + + + L +EM  K I P  +TY  +I GLCK  ++  A++L++ M+ 
Sbjct: 354 NIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHD 413

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G  PD ITY++I+ + CK   + KA  LL ++    + P   TY ILIDGLC  G L++
Sbjct: 414 RGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLED 473

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           A  +   L     +LT   YT +I+  C+ G   +A++   +M
Sbjct: 474 ARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKM 516



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 247/457 (54%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++  L +       +   Q+   +   P+ V+ N +++ +C+LG    A  +   +LK G
Sbjct: 76  ILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMG 135

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  + N  I G C+ G + +AL F + +   G   D ++Y  L  G   + +   A 
Sbjct: 136 YEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAAL 195

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++++++  K    D+V Y+ +I   C+  NV +   L   M+S+    N++ YS L+S  
Sbjct: 196 ELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGF 255

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C  G++ +A+GL  +M +  + PD+ T++IL+   CK+ +V +A      M  + I P+ 
Sbjct: 256 CIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDI 315

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             + +++ G C    +  A+   +++        V  YNI+I+G+ K+  + +A++L+++
Sbjct: 316 VTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKE 375

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  K+I P+++T+NSLI G CK+G+++ A  L+D +   G +P  +TY++ ++A C+   
Sbjct: 376 MHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHL 435

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           + + +ALL +++ + I P   TYT++I GLCK  +L++A  + ED+ V G      TY  
Sbjct: 436 VDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTV 495

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           +I+ FC      +A  LL++M  ++  P + TY I+I
Sbjct: 496 MIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIII 532



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 229/468 (48%)

Query: 42  RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSL 101
           +H   +  L+  ++      N    +I+I+  CQ   +  A   L +     + P  ++L
Sbjct: 84  KHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITL 143

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           N  +  +C  G    A      ++  G H D  SY  LI+GLC  G    ALE    +  
Sbjct: 144 NTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDG 203

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
             V+ D + YS +         ++ A+ +  +++ +    +IVTY+ LI G+C +G +++
Sbjct: 204 KLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKD 263

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            + L   M S+    +V  +++L+ + CK GR+ EA   L  M   G+KPD+VTY+ L+ 
Sbjct: 264 AIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMD 323

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           G C  ++V+ A  + N M  + ++    ++  ++ G C+ +M+ +A   F  +       
Sbjct: 324 GYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFP 383

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           +V+ YN +IDG  K G I  A++L   + ++   P I+T++S++   CKN  V  A  LL
Sbjct: 384 NVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALL 443

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +K  G+ P+  TYT  ++  C+ G ++    + +++  K    T  TYTV+I+G C  
Sbjct: 444 IKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSH 503

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
               EA+ LL  M      PD ITY  II S     +  KA +LL +M
Sbjct: 504 GLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREM 551



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/547 (24%), Positives = 250/547 (45%), Gaps = 24/547 (4%)

Query: 118 KGLFCLMLKYGLHPDAFSYNI---LIHGLCIAGSME------EALEFTNDMGRHGVEPDA 168
           + +F + +    HP  F  N     IH    + +        +A+   N + R    P  
Sbjct: 11  RSVFRVSVPKKFHPFQFPENTHFYFIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPD 70

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           + +  +               + QK+  +G  P+ V + +LI  +CQ+G +     +   
Sbjct: 71  MEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAK 130

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           +L  G++ + I  +  +   C  G+I +AL    ++ A+G   D V+Y  LI GLCK  +
Sbjct: 131 ILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGE 190

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
              A++L   +  K +  +   +  I+  +C+ + + +A   +  ++      ++V Y+ 
Sbjct: 191 TRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSA 250

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I G+  +G + +A+ L+ ++  + I+P + TFN L+  FCK G+V +A+  L  +   G
Sbjct: 251 LISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG 310

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           ++P  VTY + M+ YC    +    ++L  M  + +  T  +Y +VI G CK   + +A+
Sbjct: 311 IKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAM 370

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +L ++M+   + P+ ITYN++I   CK   +  A +L++ M     +P   TY+ ++D L
Sbjct: 371 KLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDAL 430

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C N  +  A  LL+ L++  I      YT +I   C  G +  A   F  ++ KG+ +++
Sbjct: 431 CKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTV 490

Query: 589 RDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             YT                S    M  N   PD    E+++ +     +     +L   
Sbjct: 491 NTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLRE 550

Query: 634 MIKSGLL 640
           MI  GLL
Sbjct: 551 MITRGLL 557



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 143/526 (27%), Positives = 245/526 (46%), Gaps = 48/526 (9%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G +H A+    K+  L   +   +Y +L+  L     T    +L   +       +V   
Sbjct: 154 GQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMY 213

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S +ID +C+   + DA     E   +    ++V+ +A++S +C +G  + A GLF  M  
Sbjct: 214 STIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTS 273

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             ++PD +++NIL+   C  G ++EA      M + G++PD +TY+ L  G+ L+++++ 
Sbjct: 274 ENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNM 333

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  ++  +  +G    + +Y ++I G+C+I  V++ +KL + M  +    NVI Y+ L+ 
Sbjct: 334 AKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLID 393

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CKSGRI  AL L+  M   G +PD++TYS ++  LCK   V KAI L  ++  + I P
Sbjct: 394 GLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRP 453

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N + +  ++ GLC+   + +AR  F+ L++      V  Y +MI G+   G   EA+ L 
Sbjct: 454 NMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLL 513

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY----TTFMNA 422
            ++ +    P  +T+  +I       +   A +LL  +   GL  S + Y     +FM A
Sbjct: 514 SKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAA 573

Query: 423 YC--------------EEGNIQRLL---------ALLQEMETKAIGPTHV---------- 449
                           E GN  +LL              M  K +    V          
Sbjct: 574 PAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSK 633

Query: 450 --------TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
                   TYTV+I+G C      E++ LL  M V G  PD +TY+
Sbjct: 634 QGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 235/483 (48%), Gaps = 21/483 (4%)

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           FH  + +  A  +   LL +   P  + +  ++    +  +    L L + M  +G K N
Sbjct: 45  FHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPN 104

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + +++L++  C+ G I  A  +L ++  +G +PD +T +  I+G C + ++H+A+  ++
Sbjct: 105 FVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHD 164

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL--IMSNCIQ-DVVLYNIMIDGYV 354
           ++ +     +  ++G ++ GLC+   + E R   + L  +    +Q DVV+Y+ +ID   
Sbjct: 165 KLVALGFHLDQVSYGTLINGLCK---VGETRAALELLRRVDGKLVQLDVVMYSTIIDSMC 221

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K  N+ +A  LY +++ +RIS +IVT+++LI GFC  GK+ DA  L + +    + P   
Sbjct: 222 KDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVY 281

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           T+   ++A+C+EG ++     L  M  + I P  VTY  ++ G C   ++  A  +L  M
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTM 341

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              GVT    +YN +I  FCK K + +A +L  +M    + P   TYN LIDGLC +G +
Sbjct: 342 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRI 401

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-- 592
             A  L+  + +       + Y++I+ A C    V KA+    ++ ++G   ++  YT  
Sbjct: 402 SYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTIL 461

Query: 593 -------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                        ++ F  +L  G+        VM+  F   G       L + M  +  
Sbjct: 462 IDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSC 521

Query: 640 LPD 642
           +PD
Sbjct: 522 IPD 524



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 129/298 (43%), Gaps = 45/298 (15%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL--RH-TDIMWDLYDDIKVSETPRNVY 64
           ++G +  A+ +I  M +   +  I TY+S+L  L   H  D    L   +K      N+Y
Sbjct: 397 KSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMY 456

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I+IDGLC+  RL+DA    ++   K +  +V +   ++  +C  G  + A  L   M
Sbjct: 457 TYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKM 516

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV-----EPDAITYSILAKGFH 179
                 PDA +Y I+I  L      ++A +   +M   G+     E  + + S +A   H
Sbjct: 517 KDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAH 576

Query: 180 LL---------SQISGAWKVIQKLLIKG------------SDPDIVTYTVLICGYCQIGN 218
            L         SQ SG W    KLL++              D D+   +V+I   C    
Sbjct: 577 FLNNDSLQCTSSQESGNW---AKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWS- 632

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
                        QG+ L+V  Y+V++   C  G  DE+L LL +ME  G  PD VTY
Sbjct: 633 ------------KQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTY 678


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 247/465 (53%), Gaps = 2/465 (0%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSME--EALEFTNDMGRHGVEPDAITYSILAKGF 178
           F  ML+    P    +N ++  +  A +     A+  ++ +   G+ P  +T++IL   +
Sbjct: 45  FHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCY 104

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             L +++ A+ +  K+L  G  P  +T+  LI G C  G ++E L   + +++ GF L+ 
Sbjct: 105 CHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQ 164

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           ++Y  L++ +CK G    AL +L ++E   +  D+V Y+I+I  LCK   V  A QLY+E
Sbjct: 165 VSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSE 224

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M +KRISP+     +++LG C    + EA   F  +++ N   DV  ++I++D   K GN
Sbjct: 225 MITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGN 284

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I  A  +   ++++ + P +VT++SL+ G+C   +V  A+ +  T+   G+ P A +Y  
Sbjct: 285 ITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNI 344

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +N   +   +   L+L +EM  K I P  VTY  +I GLCK  ++  A QL+++M+  G
Sbjct: 345 MINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG 404

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           +  D +TYN++I   CK   + KA  L+ ++    ++P+  TYNILIDGLC  G LKNA 
Sbjct: 405 IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQ 464

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +   L     S+    Y  +I   C EG  ++A     +M   G
Sbjct: 465 DVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNG 509



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 262/489 (53%), Gaps = 1/489 (0%)

Query: 54  IKVSETPRNVYTNSIVIDGL-CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
           +++  TP  V  N I+   +    +    AI    +   K   P++V+ N +++ YC LG
Sbjct: 49  LRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLG 108

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
               A  +F  +LK G HP   ++N LI+G+C+ G ++EAL F + +   G   D ++Y 
Sbjct: 109 EMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYR 168

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  G   + +   A ++++K+  K  + D+V Y ++I   C+   V +  +L   M+++
Sbjct: 169 TLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITK 228

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
               +V+ ++ L+   C  G++ EA GL +EM    + PD+ T+SIL+  LCK   + +A
Sbjct: 229 RISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRA 288

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
             +   M  + + P+   + +++ G C    + +A+  F ++           YNIMI+G
Sbjct: 289 KNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMING 348

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
             K+  + EA+ L++++  K I+P  VT+NSLI G CK G+++ A +L+D +  +G+   
Sbjct: 349 LGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPAD 408

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            +TY + ++  C+  +I + +AL+++++ + I P+  TY ++I GLCK  +L+ A  + +
Sbjct: 409 ILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQ 468

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           D+ + G + +  TYN +I   CK     +A  LL++M  + + P + TY  +I  L    
Sbjct: 469 DLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKD 528

Query: 533 DLKNADCLL 541
           + + A+ LL
Sbjct: 529 ENEKAEKLL 537



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 241/493 (48%), Gaps = 20/493 (4%)

Query: 164 VEPDAITYSIL-AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           VE + I  SI+ A   H  + IS    +  +L +KG  P IVT+ +L+  YC +G +   
Sbjct: 58  VEFNKILGSIVKANNNHYTTAIS----LSHQLELKGITPTIVTFNILVNCYCHLGEMTFA 113

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
             +   +L  G+    I ++ L++ +C +G++ EAL     + A+G   D V+Y  LI G
Sbjct: 114 FSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLING 173

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           LCK  +   A+Q+  ++  K ++ +   +  I+  LC+ + +++A   +  +I      D
Sbjct: 174 LCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPD 233

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           VV +N +I G+  +G + EA  L+ +++ K I+P + TF+ L+   CK+G +  A+ +L 
Sbjct: 234 VVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLA 293

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G+ P  VTY++ M+ YC    + +   +   M    + P   +Y ++I GL K  
Sbjct: 294 VMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIK 353

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            + EA+ L ++M   G+ PD +TYN++I   CK   +  A+QL+++M  + +     TYN
Sbjct: 354 MVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYN 413

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            LID LC N  +  A  L+  +++  I  +   Y  +I   C  G +  A   F  ++ K
Sbjct: 414 SLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIK 473

Query: 583 GFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           G+ ++   Y                +     M +NG  PD    E ++ A  +  +    
Sbjct: 474 GYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKA 533

Query: 628 FELAAVMIKSGLL 640
            +L   MI  GLL
Sbjct: 534 EKLLREMIIRGLL 546



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 22/287 (7%)

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK--NGKVADARRLLDTIKLHGLEPSAVT 415
           ++   V  + +++  R +PSIV FN ++    K  N     A  L   ++L G+ P+ VT
Sbjct: 37  DVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVT 96

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           +   +N YC  G +    ++  ++      PT +T+  +I G+C   KL+EA+   + + 
Sbjct: 97  FNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVI 156

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            +G   DQ++Y T+I   CK  + R A Q+L ++    +      YNI+I+ LC +  + 
Sbjct: 157 ALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVS 216

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF 595
           +A  L   +    IS   V + ++I   C  G + +A   F +MV K             
Sbjct: 217 DAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNIN---------- 266

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                     PD     +++ A  + G++     + AVM+K G++PD
Sbjct: 267 ----------PDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPD 303



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 3/234 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y     V+ A  V + M  L +     +YN ++  L   +  D    L+ ++       +
Sbjct: 314 YCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPD 373

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +IDGLC+  R+  A   + E         +++ N+++   CK    + A  L  
Sbjct: 374 TVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVK 433

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   G+ P  ++YNILI GLC  G ++ A +   D+   G   +A TY+I+  G     
Sbjct: 434 KIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEG 493

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
             + A  ++ K+   G  PD VTY  +I    +    E+  KL   M+ +G  L
Sbjct: 494 LFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLLL 547


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 163/561 (29%), Positives = 281/561 (50%), Gaps = 31/561 (5%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           +L ++Y +  ++   + V  KM    L   ++  N +L  LR  D      ++I V+   
Sbjct: 136 LLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRD------NNIDVA--- 186

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           R VY N +V  G+C                     P+VV+ N ++  +CK G  + A  L
Sbjct: 187 REVY-NVMVECGIC---------------------PTVVTYNTMLDSFCKKGMVQEALQL 224

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M   G  P+  +YN+L++GL  +G ME+A E   DM R G+E    TY  L +G+  
Sbjct: 225 LFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCE 284

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             QI  A ++ +++L +G+ P +VTY  ++ G C+ G V +  KL +VM+++    ++++
Sbjct: 285 KGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVS 344

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+    + G I EA  L  E+    L P +VTY+ LI GLC+   +  A++L +EM 
Sbjct: 345 YNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMI 404

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
                P+ F     + G C+   +  A+  FD ++      D   Y   I G +KLG+  
Sbjct: 405 KHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPS 464

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  +  +++ +   P ++T+N  I G  K G + +A  L+  +  +GL P  VTYT+ +
Sbjct: 465 KAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSII 524

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +A+   G++++  AL  EM +K I P+ VTYTV+I     + +L+ A+    +M+  GV 
Sbjct: 525 HAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVH 584

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ ITYN +I   CK + + +A+    +M    + P   TY ILI+  C  G  + A  L
Sbjct: 585 PNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRL 644

Query: 541 LVSLQEHNISLTKVAYTTIIK 561
              + +  I      + +++K
Sbjct: 645 YKDMLDREIQPDSCTHRSLLK 665



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 232/457 (50%), Gaps = 15/457 (3%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P +VTY  ++  +C+ G V+E L+L   M + G   N + Y+VL++ +  SG +++A  L
Sbjct: 200 PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKEL 259

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           + +M  +GL+  + TY  LIRG C++ ++ +A +L  EM S+   P    +  I+ GLC+
Sbjct: 260 IQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCK 319

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              +++AR   D ++  N + D+V YN +I GY +LGNIGEA  L+ +L  + ++PS+VT
Sbjct: 320 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVT 379

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +N+LI G C+ G +  A RL D +  HG +P   T+TTF+  +C+ GN+     L  EM 
Sbjct: 380 YNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEML 439

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            + + P    Y   I G  K     +A  + E+M   G  PD ITYN  I    K  +L+
Sbjct: 440 NRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLK 499

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +A +L+ +M  + L P   TY  +I    + G L+ A  L + +    I  + V YT +I
Sbjct: 500 EASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLI 559

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFP 605
            ++   G +  A+  F +M EKG   ++  Y                 +FF  M + G  
Sbjct: 560 HSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGIS 619

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           P++    +++      G       L   M+   + PD
Sbjct: 620 PNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 656



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/499 (30%), Positives = 246/499 (49%), Gaps = 2/499 (0%)

Query: 96  PSV-VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA-GSMEEAL 153
           PSV + L+ ++  Y K    E    +F  M+  GL PD  + N ++  L     +++ A 
Sbjct: 128 PSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAR 187

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           E  N M   G+ P  +TY+ +   F     +  A +++ ++   G  P+ VTY VL+ G 
Sbjct: 188 EVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGL 247

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
              G +E+  +L + ML  G +++V  Y  L+   C+ G+I+EA  L  EM + G  P +
Sbjct: 248 SHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTV 307

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VTY+ ++ GLCK  +V  A +L + M +K + P+  ++  ++ G      I EA + F  
Sbjct: 308 VTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAE 367

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L   +    VV YN +IDG  +LG++  A++L  ++I+    P + TF + + GFCK G 
Sbjct: 368 LRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGN 427

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           +  A+ L D +   GL+P    Y T +    + G+  +   + +EM  +   P  +TY V
Sbjct: 428 LPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNV 487

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
            I GL K   L+EA +L++ M   G+ PD +TY +II +      LRKA  L  +M    
Sbjct: 488 FIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKG 547

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           + P+  TY +LI    V G LK A      + E  +    + Y  +I   C    + +A 
Sbjct: 548 IFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAY 607

Query: 574 TFFCQMVEKGFEISIRDYT 592
            FF +M  KG   +   YT
Sbjct: 608 NFFAEMQAKGISPNKYTYT 626



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 242/476 (50%), Gaps = 4/476 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRN 62
           + + GMV +A+ ++ +M+ +    +  TYN L+  L H+  M    +L  D+       +
Sbjct: 212 FCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVS 271

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT   +I G C++ ++++A    +E   +   P+VV+ N IM   CK G    A+ L  
Sbjct: 272 VYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLD 331

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +M+   L PD  SYN LI+G    G++ EA     ++    + P  +TY+ L  G   L 
Sbjct: 332 VMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLG 391

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A ++  +++  G DPD+ T+T  + G+C++GN+    +L + ML++G + +  AY 
Sbjct: 392 DLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYI 451

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             +    K G   +A G+  EM A G  PDL+TY++ I GL K   + +A +L  +M   
Sbjct: 452 TRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYN 511

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   + +I+        + +AR  F  ++       VV Y ++I  Y   G +  A
Sbjct: 512 GLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLA 571

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +  + ++ EK + P+++T+N+LI G CK  K+  A      ++  G+ P+  TYT  +N 
Sbjct: 572 ILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINE 631

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            C  G+ Q  L L ++M  + I P   T+  ++K L K +KL   V+ LE++   G
Sbjct: 632 NCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLH-VVRHLENVIAAG 686



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 227/441 (51%), Gaps = 31/441 (7%)

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP---DLVTYS------------ 277
           GFK + I+YSV+L  + ++G +  A  ++ ++ +V ++    D+V+ S            
Sbjct: 76  GFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLILD 135

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE-MITEARMYFDSLIM 336
           +L+    K+  + K + ++ +M SK + P+      +L  L +++  I  AR  ++ ++ 
Sbjct: 136 LLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVE 195

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                 VV YN M+D + K G + EA+QL  Q+     SP+ VT+N L+ G   +G++  
Sbjct: 196 CGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQ 255

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A+ L+  +   GLE S  TY   +  YCE+G I+    L +EM ++   PT VTY  ++ 
Sbjct: 256 AKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMY 315

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLCK  ++ +A +LL+ M    + PD ++YNT+I  + +  ++ +AF L  ++   +L P
Sbjct: 316 GLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAP 375

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           +  TYN LIDGLC  GDL  A  L   + +H        +TT ++  C  G++  A   F
Sbjct: 376 SVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELF 435

Query: 577 CQMVEKGF-------------EISIRDYTKSFFCM--MLSNGFPPDQEICEVMLIAFHQG 621
            +M+ +G              E+ + D +K+F     ML+ GFPPD     V +   H+ 
Sbjct: 436 DEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKL 495

Query: 622 GDLGSVFELAAVMIKSGLLPD 642
           G+L    EL   M+ +GL+PD
Sbjct: 496 GNLKEASELVKKMLYNGLVPD 516


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 166/628 (26%), Positives = 305/628 (48%), Gaps = 46/628 (7%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           V+ +M +L    ++ +YN LL  L          +++  + DD    + P +V + + VI
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD--GGDCPPDVVSYTTVI 206

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +G  ++  L  A     E   +   P+VV+ ++I++  CK    + A  +   M+K G+ 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  +YN ++HG C +G  +EA+ F   M   GVEPD +TY+ L        + + A K+
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              +  +G  P+I TY  L+ GY   G + E   L ++M+  G   N   +S+L+ +  K
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++D+A+ +  +M   GL PD VTY  +I  LCK  +V  A++ + +M  +R+SP +  
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + +++  LC  +   +A+     ++      D + +N +ID + K G + E+ +L+  ++
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
              + P I+T+++LI G+C  GK+ +A +LL ++   G++P  VTY T +N YC+   ++
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             L L +EME+  + P  +TY ++++GL +  +   A +L   +   G   +  TYN I+
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV-------- 542
              CK     +A ++   + L +L+  + T+NI+I  L   G    A  L          
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686

Query: 543 ---------------------------SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
                                      S++E+  +       +I++     GD+ +A T+
Sbjct: 687 PDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNG 603
              + EK F  S+   T S F  +LS G
Sbjct: 747 LFMIDEKHF--SLEASTASLFLDLLSGG 772



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 164/645 (25%), Positives = 284/645 (44%), Gaps = 53/645 (8%)

Query: 56  VSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
             E   N+ T  I+I   C   RL      L     K F    ++   ++   C      
Sbjct: 84  ADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 143

Query: 116 VAKGLFCL-MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE--PDAITYS 172
            A  +    M + G  P+ FSYNIL+ GLC     +EALE    M   G +  PD ++Y+
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            +  GF     +  A+    ++L +G  P++VTY+ +I   C+   +++ +++   M+  
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   N   Y+ ++   C SG+  EA+G L +M + G++PD+VTY+ L+  LCK  +  +A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            ++++ M  + + P    +G +L G   K  + E     D ++ +    +  +++I+I  
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           Y K G + +A+ ++ ++ ++ ++P  VT+ ++I   CK+G+V DA R  + +    L P 
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443

Query: 413 AVTY-------------------------------TTFMNA----YCEEGNIQRLLALLQ 437
            + Y                               T F N+    +C+EG +     L  
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            M    + P  +TY+ +I G C   K+ EA +LL  M  +G+ PD +TYNT+I  +CK  
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            +  A  L  +M    + P   TYNI++ GL        A  L V + E    L    Y 
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623

Query: 558 TIIKAHCAEGDVHKAMTFF-------CQMVEKGFEISI--------RDYTKSFFCMMLSN 602
            I+   C      +A+  F        Q+  + F I I         D  K  F  + +N
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           G  PD     +M     + G L  + +L   M ++G   +  ++N
Sbjct: 684 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 146/580 (25%), Positives = 269/580 (46%), Gaps = 22/580 (3%)

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG---LHPDAFSY 136
           +DA     E   +  G S+  LN  ++   +   A  A   +  M + G   + P+  +Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGADEVTPNLCTY 94

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
            ILI   C AG ++       ++ + G   DAI ++ L KG     + S A  ++ + + 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 197 K-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--NVIAYSVLLSSMCKSGR 253
           + G  P++ +Y +L+ G C     +E L+L ++M   G     +V++Y+ +++   K G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +D+A G  +EM   G+ P++VTYS +I  LCK   + KA+++   M    + PN   + +
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           I+ G C      EA  +   +       DVV YN ++D   K G   EA +++  + ++ 
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           + P I T+ +L+ G+   G + +   LLD +  +G+ P+   ++  + AY ++G + + +
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            +  +M  + + P  VTY  VI  LCK  ++++A++  E M    ++P  I YN++I S 
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C      KA +L+ +M    +   +  +N +ID  C  G +  ++ L   +    +    
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTK--------SFFCM 598
           + Y+T+I  +C  G + +A      MV  G       +   I  Y K          F  
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
           M S+G  PD     ++L    Q     +  EL   + +SG
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 190/405 (46%), Gaps = 6/405 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y++ G V  A+ V +KM++  L     TY +++  L    R  D M      I  
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
             +P N+  NS+ I  LC   +   A   + E   +      +  N+I+  +CK G    
Sbjct: 439 RLSPGNIVYNSL-IHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           ++ LF LM++ G+ PD  +Y+ LI G C+AG M+EA +    M   G++PD +TY+ L  
Sbjct: 498 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+  +S++  A  + +++   G  PDI+TY +++ G  Q        +L   +   G +L
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +  Y+++L  +CK+   DEAL +   +    L+ +  T++I+I  L K  +  +A  L+
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             + +  + P+   +  +   L E+ ++ E    F S+  + C  +  + N ++   ++ 
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           G+I  A      + EK  S    T  SL       GK  +  R L
Sbjct: 738 GDITRAGTYLFMIDEKHFSLEAST-ASLFLDLLSGGKYQEYHRFL 781


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 154/504 (30%), Positives = 267/504 (52%), Gaps = 8/504 (1%)

Query: 93  EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           +F P++   N I+    K    +  K ++  +L   + P+ +++N +++G C  G++ EA
Sbjct: 154 KFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA 213

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
             + + + + G+ PD  TY+ L  G      +  A++V   +  KG   + V+YT LI G
Sbjct: 214 ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHG 273

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            C+ G + E LKL   M        V  Y+VL+ ++  SGR  EAL L  EM+  G +P+
Sbjct: 274 LCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN 333

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           + TY++LI GLCK++K+ +A ++ +EM  K + P+   + A++ G C++ MI +A    D
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD 393

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +  ++C  +   YN +I G  K   + +A+ L  +++E+++SPS++T+NSLI+G CK  
Sbjct: 394 LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVN 453

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
            +  A RLL  +  +GL P   TY+ F++  C+EG ++    L   ++ K +    V YT
Sbjct: 454 DLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYT 513

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I G CK  K+  A  LLE M      P+  TYN +I   CK K +++A  L+ +M   
Sbjct: 514 ALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL----TKVAYTTIIKAHCAEGD 568
            ++PT  TY ILI  +  +G   +A    + +  H +SL        YT  + A+ ++G 
Sbjct: 574 GVKPTVVTYTILIGEMLKDGAFDHA----LKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM 629

Query: 569 VHKAMTFFCQMVEKGFEISIRDYT 592
           + +      +M E+G    +  YT
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYT 653



 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 152/501 (30%), Positives = 249/501 (49%)

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           E    +  P++ + NA+++ YCK+G    A+     +++ GLHPD F+Y  LI G C   
Sbjct: 184 ELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNK 243

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            ++ A E    M + G + + ++Y+ L  G     +I+ A K+   +      P + TYT
Sbjct: 244 GVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           VLI      G   E L L   M  +G + NV  Y+VL+  +CK  ++DEA  +L EM   
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK 363

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL P +VTY+ LI G CK+  +  A ++ + M S    PN+  +  ++ GLC+K  + +A
Sbjct: 364 GLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
               + ++       ++ YN +I G  K+ ++  A +L   + E  + P   T++  I  
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G+V +A  L D++K  G++ + V YT  ++ YC+ G I    +LL+ M   A  P 
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPN 543

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TY V+I+GLCK+ K++EA  L+  M  +GV P  +TY  +I    K      A ++ N
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M     +P   TY   +      G L+  D ++  + E  I    V YT +I  +   G
Sbjct: 604 HMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLG 663

Query: 568 DVHKAMTFFCQMVEKGFEISI 588
             H+A  F   MV+ G + S+
Sbjct: 664 LTHRAFDFLKCMVDTGCKPSL 684



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 182/691 (26%), Positives = 307/691 (44%), Gaps = 69/691 (9%)

Query: 12  VHDAVFVIAKMK------ELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRN 62
           + D +FV+   +      E   K +++ YN++L +L      D M  +Y ++  ++   N
Sbjct: 134 IEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPN 193

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           +YT + +++G C+   + +A L+  +       P   +  +++  +C+    + A  +F 
Sbjct: 194 IYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFL 253

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +M + G   +  SY  LIHGLC AG + EAL+   DM      P   TY++L        
Sbjct: 254 IMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A  +  ++  KG +P++ TYTVLI G C+   ++E  K+   M  +G   +V+ Y+
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   CK G ID+A  +L  ME+    P+  TY+ LI GLCK+ KVHKA+ L N+M  +
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433

Query: 303 RISP-----NSFAHG------------------------------AILLGLCEKEMITEA 327
           ++SP     NS  HG                                +  LC++  + EA
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              FDS+       + V+Y  +IDGY K+G I  A  L  +++     P+  T+N LI G
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK  K+ +A  L+  +   G++P+ VTYT  +    ++G     L +   M +    P 
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TYT  +     Q  L+E   ++  M   G+ PD +TY  +I  + +     +AF  L 
Sbjct: 614 VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA--YTTIIKAHCA 565
            M     +P+    +ILI  L     +K     +      N++   +A  + T+      
Sbjct: 674 CMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTL------ 727

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEI 610
             +   A+  F +MVE G  I +  Y    + FC              M   G  P ++I
Sbjct: 728 --EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI 785

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
              +L    + G       L   M+++GLLP
Sbjct: 786 YNSLLDCCCKLGVYAEAVRLVDAMVENGLLP 816



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 244/547 (44%), Gaps = 50/547 (9%)

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           E     N  G    +P    Y+ +         I     V  +LL     P+I T+  ++
Sbjct: 142 EVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMV 201

Query: 211 CGYCQIGNVEE-----------GL------------------------KLREVMLSQGFK 235
            GYC+IGNV E           GL                        ++  +M  +G +
Sbjct: 202 NGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQ 261

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            N ++Y+ L+  +C++GRI+EAL L  +M      P + TY++LI  L    +  +A+ L
Sbjct: 262 RNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNL 321

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +NEM  K   PN   +  ++ GLC++  + EAR     +     I  VV YN +IDGY K
Sbjct: 322 FNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK 381

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G I +A ++   +      P+  T+N LI G CK  KV  A  LL+ +    L PS +T
Sbjct: 382 EGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y + ++  C+  +++    LL  M    + P   TY+V I  LCK+ +++EA  L + + 
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             GV  +++ Y  +I  +CK   +  A+ LL +M      P S TYN+LI+GLC    +K
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMK 561

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT--- 592
            A  L+  +    +  T V YT +I     +G    A+  F  MV  G++  +  YT   
Sbjct: 562 EASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFL 621

Query: 593 KSFFCM------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
            ++F              M   G  PD     V++  + + G     F+    M+ +G  
Sbjct: 622 HAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCK 681

Query: 641 PDKFLIN 647
           P  ++++
Sbjct: 682 PSLYIVS 688



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 152/592 (25%), Positives = 272/592 (45%), Gaps = 46/592 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
             G +++A+ + A M E +   +++TY  L+Y L    R  + + +L++++K      NV
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL-NLFNEMKEKGCEPNV 334

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE-------- 115
           +T +++IDGLC+++++ +A   L E + K   PSVV+ NA++  YCK G  +        
Sbjct: 335 HTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDL 394

Query: 116 ---------------------------VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
                                       A  L   ML+  L P   +YN LIHG C    
Sbjct: 395 MESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVND 454

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +E A    + M  +G+ PD  TYS+         ++  A  +   +  KG   + V YT 
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI GYC++G ++    L E ML+     N   Y+VL+  +CK  ++ EA  L+ +M  +G
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           +KP +VTY+ILI  + K      A++++N M S    P+   + A L     + M+ E  
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
                +     + D+V Y ++IDGY +LG    A    + +++    PS+   + LI   
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL 694

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
               ++ + R  +      G++  +   +  +    +    +  L L ++M         
Sbjct: 695 SHENRMKETRSEI------GIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDV 748

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
             Y  +I G C+Q +L+EA  L+  M   G++P +  YN+++   CK     +A +L++ 
Sbjct: 749 SIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDA 808

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           M  + L P   +Y +L+ GL + G  + A  +   L     +  +VA+  +I
Sbjct: 809 MVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLI 860



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/528 (25%), Positives = 242/528 (45%), Gaps = 67/528 (12%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR---NVYTNSIVI 70
           +A  ++++M E  L  S+ TYN+L+       ++ D ++ + + E+     N  T + +I
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
            GLC++ ++  A+  L +   ++  PS+++ N+++   CK+   E A  L  LM + GL 
Sbjct: 412 CGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD ++Y++ I  LC  G +EEA    + +   GV+ + + Y+ L  G+  + +I  A+ +
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++++L     P+  TY VLI G C+   ++E   L   ML+ G K  V+ Y++L+  M K
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591

Query: 251 SGRIDEAL----------------------------GLLYEMEAV-------GLKPDLVT 275
            G  D AL                            G+L E++ V       G+ PDLVT
Sbjct: 592 DGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR------- 328
           Y++LI G  +    H+A      M      P+ +    ++  L  +  + E R       
Sbjct: 652 YTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDS 711

Query: 329 ----------------------MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
                                   F+ ++   C  DV +Y  +I G+ +   + EA  L 
Sbjct: 712 VSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLV 771

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             + E+ +SPS   +NSL+   CK G  A+A RL+D +  +GL P   +Y   +     E
Sbjct: 772 HHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIE 831

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           G+ ++  A+   + +       V + V+I GL K+  + E  +L++ M
Sbjct: 832 GSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIM 879



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 196/420 (46%), Gaps = 38/420 (9%)

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
           + L  GFK NV +YS +L+ + ++  +  A  +   M               I+  C  +
Sbjct: 91  IALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISM---------------IKSCCSIE 135

Query: 288 KVHKAIQLYNEMCSK---RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
            V   ++++ +M +    +  P    +  IL+ L +  +I E +  +  L+ +    ++ 
Sbjct: 136 DVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIY 195

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            +N M++GY K+GN+ EA     ++++  + P   T+ SLI G C+N  V +A  +   +
Sbjct: 196 TFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIM 255

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G + + V+YT  ++  CE G I   L L  +M      PT  TYTV+I  L    + 
Sbjct: 256 PQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRK 315

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            EA+ L  +M   G  P+  TY  +I   CK   + +A ++L++M    L P+  TYN L
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNAL 375

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           IDG C  G + +A  +L  ++ ++       Y  +I   C +  VHKAM    +M+E+  
Sbjct: 376 IDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL 435

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
             S+  Y          N     Q  C+V         DL S + L ++M ++GL+PD++
Sbjct: 436 SPSLITY----------NSLIHGQ--CKV--------NDLESAYRLLSLMNENGLVPDQW 475



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 202/463 (43%), Gaps = 32/463 (6%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           VH A+ ++ KM E  L  S+ TYNSL++    +   +  + L   +  +    + +T S+
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
            ID LC++ R+++A         K    + V   A++  YCK+G  +VA  L   ML   
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P++++YN+LI GLC    M+EA      M   GV+P  +TY+IL            A 
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           KV   ++  G  PD+ TYT  +  Y   G +EE   +   M  +G   +++ Y+VL+   
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGY 659

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK----------------- 291
            + G    A   L  M   G KP L   SILI+ L  ++++ +                 
Sbjct: 660 ARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVD 719

Query: 292 ------------AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
                       A++L+ +M     + +   +GA++ G C++E + EA+     +     
Sbjct: 720 IADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGM 779

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
                +YN ++D   KLG   EAV+L   ++E  + P + ++  L+ G    G    A+ 
Sbjct: 780 SPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKA 839

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           +   +   G     V +   ++   +   +     L+  ME K
Sbjct: 840 VFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 882



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/397 (23%), Positives = 176/397 (44%), Gaps = 32/397 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVY 64
           + G V +A  +   +K   +K +   Y +L+     +   D+ + L + +       N Y
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY 545

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +++I+GLC++ ++++A   + +       P+VV+   ++    K G  + A  +F  M
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G  PD  +Y   +H     G +EE  +    M   G+ PD +TY++L  G+  L   
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT 665

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLI---------------CGYCQIGNV---------- 219
             A+  ++ ++  G  P +   ++LI                G   + NV          
Sbjct: 666 HRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWK 725

Query: 220 ----EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
               E  LKL E M+  G  ++V  Y  L++  C+  R++EA GL++ M+  G+ P    
Sbjct: 726 TLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI 785

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ L+   CK     +A++L + M    + P   ++  ++ GL  +    +A+  F  L+
Sbjct: 786 YNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLL 845

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
                 D V + ++IDG +K   + E  +L   + EK
Sbjct: 846 SCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 882


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 161/578 (27%), Positives = 266/578 (46%), Gaps = 34/578 (5%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L DAI F           + V  N ++  + ++   +VA  L+  M    +  + +S+NI
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI   C    +  +L     + + G +PD +T++ L  G  L  +IS A  +   ++  G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 199 S----------DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           S           P ++T+  LI G C  G V E   L   M+ +G  ++V+ Y  +++ M
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK G    AL LL +ME   +KPD+V YS +I  LCK      A  L++EM  K I+PN 
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F +  ++ G C     ++A+     +I      DV+ +N +I   VK G + EA +L  +
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 386

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           ++ + I P  VT+NS+IYGFCK+ +  DA+ + D +      P  VT+ T ++ YC    
Sbjct: 387 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKR 442

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +   + LL+E+  + +     TY  +I G C+   L  A  L ++M   GV PD IT N 
Sbjct: 443 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 502

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           ++  FC+ + L +A +L   + +  ++  +  YNI+I G+C    +  A  L  SL  H 
Sbjct: 503 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 562

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ 608
           +      Y  +I   C +  +  A   F +M +                    NG  PD 
Sbjct: 563 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKD--------------------NGHEPDN 602

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
                ++    + G++    EL + M  +G   D F I
Sbjct: 603 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 640



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 269/572 (47%), Gaps = 21/572 (3%)

Query: 23  KELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDA 82
           +EL LK     + SL       D   D +D +  S         + VI    + +R   A
Sbjct: 73  EELKLKSGSHYFKSL-------DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVA 125

Query: 83  ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
           I   ++   +    ++ S N ++  +C       +   F  + K G  PD  ++N L+HG
Sbjct: 126 ISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHG 185

Query: 143 LCIAGSMEEAL----------EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
           LC+   + EAL             + M   G+ P  IT++ L  G  L  ++  A  ++ 
Sbjct: 186 LCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 245

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           K++ KG   D+VTY  ++ G C++G+ +  L L   M     K +V+ YS ++  +CK G
Sbjct: 246 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 305

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
              +A  L  EM   G+ P++ TY+ +I G C   +   A +L  +M  + I+P+     
Sbjct: 306 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 365

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           A++    ++  + EA    D ++      D V YN MI G+ K     +A  ++  +   
Sbjct: 366 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM--- 422

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
             SP +VTFN++I  +C+  +V +  +LL  I   GL  +  TY T ++ +CE  N+   
Sbjct: 423 -ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 481

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             L QEM +  + P  +T  +++ G C+  KL+EA++L E + +  +  D + YN II  
Sbjct: 482 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 541

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            CK   + +A+ L   + +H +EP   TYN++I G C    + +A+ L   ++++     
Sbjct: 542 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 601

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
              Y T+I+     G++ K++    +M   GF
Sbjct: 602 NSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 633



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/538 (25%), Positives = 246/538 (45%), Gaps = 42/538 (7%)

Query: 41  LRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVS 100
           +   D+   LY  +++   P N+Y+ +I+I   C   +L  ++    +     F P VV+
Sbjct: 119 MNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVT 178

Query: 101 LNAIMSRYCK----------LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
            N ++   C            G+      LF  M++ GL P   ++N LI+GLC+ G + 
Sbjct: 179 FNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVL 238

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           EA    N M   G+  D +TY  +  G   +     A  ++ K+      PD+V Y+ +I
Sbjct: 239 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 298

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
              C+ G+  +   L   ML +G   NV  Y+ ++   C  GR  +A  LL +M    + 
Sbjct: 299 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 358

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD++T++ LI    K+ K+ +A +L +EM  + I P++  + +++ G C+     +A+  
Sbjct: 359 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 418

Query: 331 FD-----SLIMSNCIQDV--------------------------VLYNIMIDGYVKLGNI 359
           FD      ++  N I DV                            YN +I G+ ++ N+
Sbjct: 419 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 478

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A  L++++I   + P  +T N L+YGFC+N K+ +A  L + I++  ++   V Y   
Sbjct: 479 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 538

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C+   +     L   +    + P   TY V+I G C +  + +A  L   M   G 
Sbjct: 539 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 598

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
            PD  TYNT+IR   K  ++ K+ +L+++M  +     + T  ++ D L  +G L  +
Sbjct: 599 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS 655



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 223/488 (45%), Gaps = 34/488 (6%)

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +++IL K F    ++S +     KL   G  PD+VT+  L+ G C    + E L L   M
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202

Query: 230 LSQGFKLN----------VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           +  G   +          VI ++ L++ +C  GR+ EA  L+ +M   GL  D+VTY  +
Sbjct: 203 VETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 262

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           + G+CK      A+ L ++M    I P+   + AI+  LC+    ++A+  F  ++    
Sbjct: 263 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 322

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             +V  YN MIDG+   G   +A +L R +IE+ I+P ++TFN+LI    K GK+ +A +
Sbjct: 323 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 382

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L D +    + P  VTY + +  +C+         +   M +    P  VT+  +I   C
Sbjct: 383 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYC 438

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           +  ++ E +QLL ++   G+  +  TYNT+I  FC+  +L  A  L  +M  H + P + 
Sbjct: 439 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 498

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           T NIL+ G C N  L+ A  L   +Q   I L  VAY  II   C    V +A   FC +
Sbjct: 499 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 558

Query: 580 VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                                 +G  PD +   VM+  F     +     L   M  +G 
Sbjct: 559 P--------------------IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 598

Query: 640 LPDKFLIN 647
            PD    N
Sbjct: 599 EPDNSTYN 606



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 239/482 (49%), Gaps = 19/482 (3%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD-------------LYDD-IKVSETPRNV 63
              K+ +L  +  + T+N+LL+ L   D + +             L+D  +++  TP  V
Sbjct: 163 TFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPV-V 221

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +I+GLC + R+ +A   + +  GK     VV+   I++  CK+G  + A  L   
Sbjct: 222 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 281

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M +  + PD   Y+ +I  LC  G   +A    ++M   G+ P+  TY+ +  GF    +
Sbjct: 282 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 341

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
            S A ++++ ++ +  +PD++T+  LI    + G + E  KL + ML +    + + Y+ 
Sbjct: 342 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 401

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++   CK  R D+A  +   M +    PD+VT++ +I   C+  +V + +QL  E+  + 
Sbjct: 402 MIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 457

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           +  N+  +  ++ G CE + +  A+  F  +I      D +  NI++ G+ +   + EA+
Sbjct: 458 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 517

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L+  +   +I    V +N +I+G CK  KV +A  L  ++ +HG+EP   TY   ++ +
Sbjct: 518 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 577

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C +  I     L  +M+     P + TY  +I+G  K  ++ ++++L+ +M   G + D 
Sbjct: 578 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 637

Query: 484 IT 485
            T
Sbjct: 638 FT 639



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 205/457 (44%), Gaps = 39/457 (8%)

Query: 206 YTVLICG-----YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           YT + C      + ++   +  + L   M  +   LN+ ++++L+   C   ++  +L  
Sbjct: 104 YTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLST 163

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI----------QLYNEMCSKRISPNSFA 310
             ++  +G +PD+VT++ L+ GLC +D++ +A+           L+++M    ++P    
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVIT 223

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
              ++ GLC +  + EA    + ++      DVV Y  +++G  K+G+   A+ L  ++ 
Sbjct: 224 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 283

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           E  I P +V ++++I   CK+G  +DA+ L   +   G+ P+  TY   ++ +C  G   
Sbjct: 284 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 343

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               LL++M  + I P  +T+  +I    K+ KL EA +L ++M    + PD +TYN++I
Sbjct: 344 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 403

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             FCK      A  + + M      P   T+N +ID  C    +     LL  +    + 
Sbjct: 404 YGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 459

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEI 610
                Y T+I   C   +++ A   F +M+                    S+G  PD   
Sbjct: 460 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMI--------------------SHGVCPDTIT 499

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           C ++L  F +   L    EL  V+  S +  D    N
Sbjct: 500 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 536



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 3/204 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPR 61
           VY R   V + + ++ ++    L  +  TYN+L++     D +    DL+ ++       
Sbjct: 436 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 495

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +  T +I++ G C+  +L++A+   +     +     V+ N I+   CK    + A  LF
Sbjct: 496 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 555

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
           C +  +G+ PD  +YN++I G C   ++ +A    + M  +G EPD  TY+ L +G    
Sbjct: 556 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 615

Query: 182 SQISGAWKVIQKLLIKGSDPDIVT 205
            +I  + ++I ++   G   D  T
Sbjct: 616 GEIDKSIELISEMRSNGFSGDAFT 639


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 166/628 (26%), Positives = 305/628 (48%), Gaps = 46/628 (7%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           V+ +M +L    ++ +YN LL  L          +++  + DD    + P +V + + VI
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDD--GGDCPPDVVSYTTVI 206

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +G  ++  L  A     E   +   P+VV+ ++I++  CK    + A  +   M+K G+ 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  +YN ++HG C +G  +EA+ F   M   GVEPD +TY+ L        + + A K+
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              +  +G  P+I TY  L+ GY   G + E   L ++M+  G   N   +S+L+ +  K
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++D+A+ +  +M   GL PD VTY  +I  LCK  +V  A++ + +M  +R+SP +  
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + +++  LC  +   +A+     ++      D + +N +ID + K G + E+ +L+  ++
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
              + P I+T+++LI G+C  GK+ +A +LL ++   G++P  VTY T +N YC+   ++
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             L L +EME+  + P  +TY ++++GL +  +   A +L   +   G   +  TYN I+
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV-------- 542
              CK     +A ++   + L +L+  + T+NI+I  L   G    A  L          
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686

Query: 543 ---------------------------SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
                                      S++E+  +       +I++     GD+ +A T+
Sbjct: 687 PDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNG 603
              + EK F  S+   T S F  +LS G
Sbjct: 747 LFMIDEKHF--SLEASTASLFLDLLSGG 772



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 156/605 (25%), Positives = 268/605 (44%), Gaps = 53/605 (8%)

Query: 56  VSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
             E   N+ T  I++   C   RL      L     K F    ++   ++   C      
Sbjct: 84  ADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTS 143

Query: 116 VAKGLFCL-MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE--PDAITYS 172
            A  +    M + G  P+ FSYNIL+ GLC     +EALE    M   G +  PD ++Y+
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYT 203

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            +  GF     +  A+    ++L +G  P++VTY+ +I   C+   +++ +++   M+  
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   N   Y+ ++   C SG+  EA+G L +M + G++PD+VTY+ L+  LCK  +  +A
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            ++++ M  + + P    +G +L G   K  + E     D ++ +    +  +++I+I  
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           Y K G + +A+ ++ ++ ++ ++P  VT+ ++I   CK+G+V DA R  + +    L P 
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443

Query: 413 AVTY-------------------------------TTFMNA----YCEEGNIQRLLALLQ 437
            + Y                               T F N+    +C+EG +     L  
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            M    + P  +TY+ +I G C   K+ EA +LL  M  +G+ PD +TYNT+I  +CK  
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            +  A  L  +M    + P   TYNI++ GL        A  L V + E    L    Y 
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623

Query: 558 TIIKAHCAEGDVHKAMTFF-------CQMVEKGFEISI--------RDYTKSFFCMMLSN 602
            I+   C      +A+  F        Q+  + F I I         D  K  F  + +N
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 603 GFPPD 607
           G  PD
Sbjct: 684 GLVPD 688



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 144/580 (24%), Positives = 269/580 (46%), Gaps = 22/580 (3%)

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG---LHPDAFSY 136
           +DA     E   +  G S+  LN  ++   +   A  A   +  M + G   + P+  +Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGADEVTPNLCTY 94

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
            IL+   C AG ++       ++ + G   DAI ++ + KG     + S A  ++ + + 
Sbjct: 95  GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMT 154

Query: 197 K-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--NVIAYSVLLSSMCKSGR 253
           + G  P++ +Y +L+ G C     +E L+L ++M   G     +V++Y+ +++   K G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +D+A G  +EM   G+ P++VTYS +I  LCK   + KA+++   M    + PN   + +
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           I+ G C      EA  +   +       DVV YN ++D   K G   EA +++  + ++ 
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           + P I T+ +L+ G+   G + +   LLD +  +G+ P+   ++  + AY ++G + + +
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            +  +M  + + P  VTY  VI  LCK  ++++A++  E M    ++P  I YN++I S 
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C      KA +L+ +M    +   +  +N +ID  C  G +  ++ L   +    +    
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTK--------SFFCM 598
           + Y+T+I  +C  G + +A      MV  G       +   I  Y K          F  
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
           M S+G  PD     ++L    Q     +  EL   + +SG
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/543 (25%), Positives = 243/543 (44%), Gaps = 70/543 (12%)

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           D+ RH        Y+ +A+        +GA +V          P++ TY +L+   C  G
Sbjct: 63  DVARHSPAAAVSRYNRMAR--------AGADEVT---------PNLCTYGILMGSCCCAG 105

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL-LYEMEAVGLKPDLVTY 276
            ++ G      ++ +GF ++ IA++ +L  +C   R  +A+ + L  M  +G  P++ +Y
Sbjct: 106 RLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 277 SILIRGLCKQDKVHKAIQL-------------------------------------YNEM 299
           +IL++GLC  ++  +A++L                                     Y+EM
Sbjct: 166 NILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             + I PN   + +I+  LC+ + + +A     S++ +  + +   YN ++ GY   G  
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA+   +++    + P +VT+NSL+   CKNG+  +AR++ D++   GL+P   TY T 
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +  Y  +G +  +  LL  M    I P H  ++++I    KQ K+ +A+ +   M   G+
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD +TY T+I   CK   +  A +   QM    L P +  YN LI  LC+      A  
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC 597
           L++ + +  I L  + + +II +HC EG V ++   F  MV  G +  I  Y+     +C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 598 M-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           +             M+S G  PD      ++  + +   +     L   M  SG+ PD  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 645 LIN 647
             N
Sbjct: 586 TYN 588



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 190/405 (46%), Gaps = 6/405 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y++ G V  A+ V +KM++  L     TY +++  L    R  D M      I  
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
             +P N+  NS+ I  LC   +   A   + E   +      +  N+I+  +CK G    
Sbjct: 439 RLSPGNIVYNSL-IHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           ++ LF LM++ G+ PD  +Y+ LI G C+AG M+EA +    M   G++PD +TY+ L  
Sbjct: 498 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+  +S++  A  + +++   G  PDI+TY +++ G  Q        +L   +   G +L
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +  Y+++L  +CK+   DEAL +   +    L+ +  T++I+I  L K  +  +A  L+
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             + +  + P+   +  +   L E+ ++ E    F S+  + C  +  + N ++   ++ 
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           G+I  A      + EK  S    T  SL       GK  +  R L
Sbjct: 738 GDITRAGTYLFMIDEKHFSLEAST-ASLFLDLLSGGKYQEYHRFL 781


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 263/518 (50%), Gaps = 40/518 (7%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGL----CQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           +L+D++ +S    +V + SIV D L    C+  R  +A         K   P + + N +
Sbjct: 162 ELFDELTLSRDRLSVKS-SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDM 220

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +S + KL   E+A  L+  M +  +    +++NI+++ LC  G +++A EF   M     
Sbjct: 221 LSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFM----- 275

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
                      +G                    G  P++V+Y  +I GY   GN+E   +
Sbjct: 276 -----------EGL-------------------GFKPNVVSYNTIIHGYSSRGNIEGARR 305

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           + + M  +G + +   Y  L+S MCK GR++EA GL  +M  +GL P+ VTY+ LI G C
Sbjct: 306 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC 365

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
            +  + +A    +EM  K I P+   +  ++  L  +  + EA      +     I D +
Sbjct: 366 NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 425

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            YNI+I+GY + GN  +A  L+ +++ K I P+ VT+ SLIY   +  ++ +A  L + I
Sbjct: 426 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 485

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G+ P  + +   ++ +C  GN++R   LL+EM+ K++ P  VT+  +++G C++ K+
Sbjct: 486 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 545

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           +EA  LL++M   G+ PD I+YNT+I  + +  D++ AF++ ++M      PT  TYN L
Sbjct: 546 EEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNAL 605

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
           I  LC N +   A+ LL  +    IS     Y ++I+ 
Sbjct: 606 IKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 643



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 152/472 (32%), Positives = 244/472 (51%), Gaps = 38/472 (8%)

Query: 22  MKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSR 78
           MKE  +   I+T N   SL   L   ++ W LY ++        VYT +I+++ LC++ +
Sbjct: 205 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 264

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L+ A         +EF                +GF E   GL       G  P+  SYN 
Sbjct: 265 LKKA---------REF----------------IGFME---GL-------GFKPNVVSYNT 289

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           +IHG    G++E A    + M   G+EPD+ TY  L  G     ++  A  +  K++  G
Sbjct: 290 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 349

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P+ VTY  LI GYC  G++E     R+ M+ +G   +V  Y++L+ ++   GR+ EA 
Sbjct: 350 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD 409

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            ++ EM   G+ PD +TY+ILI G  +     KA  L+NEM SK I P    + +++  L
Sbjct: 410 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 469

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
             +  + EA   F+ ++      DV+++N M+DG+   GN+  A  L +++  K + P  
Sbjct: 470 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDE 529

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VTFN+L+ G C+ GKV +AR LLD +K  G++P  ++Y T ++ Y   G+I+    +  E
Sbjct: 530 VTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDE 589

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           M +    PT +TY  +IK LCK  +   A +LL++M   G++PD  TY ++I
Sbjct: 590 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 641



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 251/503 (49%), Gaps = 21/503 (4%)

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           + G  IA + E   E T    R  V+  +I + +L +    L +   A+K    +  KG 
Sbjct: 152 VMGTRIATNRELFDELTLSRDRLSVK-SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGI 210

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            P I T   ++  + ++  +E    L   M        V  ++++++ +CK G++ +A  
Sbjct: 211 VPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKARE 270

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
            +  ME +G KP++V+Y+ +I G   +  +  A ++ + M  K I P+S+ +G+++ G+C
Sbjct: 271 FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMC 330

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           ++  + EA   FD ++    + + V YN +IDGY   G++  A     ++++K I PS+ 
Sbjct: 331 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS 390

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T+N L++     G++ +A  ++  ++  G+ P A+TY   +N Y   GN ++   L  EM
Sbjct: 391 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 450

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
            +K I PTHVTYT +I  L ++ +++EA  L E +   GV+PD I +N ++   C   ++
Sbjct: 451 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV 510

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
            +AF LL +M   ++ P   T+N L+ G C  G ++ A  LL  ++   I    ++Y T+
Sbjct: 511 ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTL 570

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
           I  +   GD+  A     +M+  GF  ++  Y     C+            C+      +
Sbjct: 571 ISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCL------------CK------N 612

Query: 620 QGGDLGSVFELAAVMIKSGLLPD 642
           Q GDL    EL   M+  G+ PD
Sbjct: 613 QEGDLAE--ELLKEMVNKGISPD 633



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 169/360 (46%), Gaps = 40/360 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDD-IKVSETPR 61
           YS  G +  A  ++  M+   ++    TY SL+  +     + +   L+D  +++   P 
Sbjct: 294 YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP- 352

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T + +IDG C +  L+ A  +  E   K   PSV + N ++      G    A  + 
Sbjct: 353 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI 412

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M K G+ PDA +YNILI+G    G+ ++A +  N+M   G+EP  +TY+ L       
Sbjct: 413 KEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRR 472

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           +++  A  + +K+L +G  PD++ +  ++ G+C  GNVE    L + M  +    + + +
Sbjct: 473 NRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 532

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPD----------------------------- 272
           + L+   C+ G+++EA  LL EM+  G+KPD                             
Sbjct: 533 NTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 592

Query: 273 ------LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
                 L+TY+ LI+ LCK  +   A +L  EM +K ISP+   + +++ G+   + + E
Sbjct: 593 IGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 163/368 (44%), Gaps = 44/368 (11%)

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           E  S  ++P   ++  +L  LC K  +      F   +  +C+ D   Y + +    +L 
Sbjct: 87  EQVSPNLTPALISN--VLYNLCSKPQLVSD---FIHHLHPHCL-DTKSYCLAVVLLARLP 140

Query: 358 NIGEAVQLYRQLIEKRIS------------------PSIVTFNSLIYGFCKNGKVADARR 399
           +   A+QL +Q++  RI+                   S + F+ L+   C+  +  +A +
Sbjct: 141 SPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFK 200

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
               +K  G+ P   T    ++ + +   ++    L  EM    I  T  T+ +++  LC
Sbjct: 201 CFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLC 260

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K+ KL++A + +  M  +G  P+ ++YNTII  +    ++  A ++L+ M +  +EP S 
Sbjct: 261 KEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 320

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TY  LI G+C  G L+ A  L   + E  +    V Y T+I  +C +GD+ +A ++  +M
Sbjct: 321 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 380

Query: 580 VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
           V+KG   S+  Y                     +++ A    G +G   ++   M K G+
Sbjct: 381 VKKGIMPSVSTYN--------------------LLVHALFMEGRMGEADDMIKEMRKKGI 420

Query: 640 LPDKFLIN 647
           +PD    N
Sbjct: 421 IPDAITYN 428


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 161/537 (29%), Positives = 269/537 (50%), Gaps = 6/537 (1%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           R+  + + V+  LC+Q    DA LFL      E  P+ VS   +M   C       A GL
Sbjct: 76  RDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGL 135

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M   G+ PD  +Y  LI GLC A  +++A+E   +M   G+EP+ + YS L +G+  
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +     KV +++  +G +PD+V YT LI   C+ G V++  ++ + M+ +G + NV+ 
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+VL++SMCK G + EA+ L   M   G+  D VTY+ LI GL    ++ +A+ L  EM 
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315

Query: 301 SKR--ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
                + PN     +++ GLC+   + +A    D +  + C  ++V +N++I G +++  
Sbjct: 316 HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHK 375

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + +A++L  ++    + P   T++ LI GFCK  +V  A  LL  ++  G+EP  V Y  
Sbjct: 376 VKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIP 435

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            + A CE+G +++      EM  K      V Y+ +I G C+    + A + L+ M   G
Sbjct: 436 LLAALCEQGMMEQARNFFDEMH-KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEG 494

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           + PD +TY+ +I  F    DL  A ++L QM      P  A ++ LI G    GD +   
Sbjct: 495 LIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVL 554

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGD---VHKAMTFFCQMVEKGFEISIRDYT 592
            L+  +   +I+L     +TI     A  +   + +++  F   V KG  IS  + T
Sbjct: 555 ELIREMTAKDIALDSKIISTIYTCLVANNEGKALLQSVPGFDTEVSKGAVISSHELT 611



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 275/540 (50%), Gaps = 18/540 (3%)

Query: 96  PSV---VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           PSV   VS N +++  C+ G    A      ++ +   P A SY  L+  LC      +A
Sbjct: 73  PSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQA 132

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           +    DM   GV PD +TY  L +G    + +  A ++++++   G +P++V Y+ L+ G
Sbjct: 133 VGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQG 192

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           YC+ G  E   K+ E M  +G + +V+ Y+ L+ S+C+ G++ +A  ++ +M   GL+P+
Sbjct: 193 YCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPN 252

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY++LI  +CK+  V +A+ L N M  K ++ ++  +  ++ GL     + EA    +
Sbjct: 253 VVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLE 312

Query: 333 SLIMSNCI--QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            +I    +   +VV +N +I G  K G + +A Q+   + E   + ++VTFN LI G  +
Sbjct: 313 EMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLR 372

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
             KV  A  L+D +   GLEP + TY+  +N +C+   + R  +LL +M    I P  V 
Sbjct: 373 VHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVH 432

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  ++  LC+Q  +++A    ++M+      D + Y+T+I   C+ +D + A + L  M 
Sbjct: 433 YIPLLAALCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHML 491

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              L P S TY++LI+    +GDL  A+ +L  +           + ++IK + A+GD  
Sbjct: 492 DEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTE 551

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN----------GFPPDQEICEVMLIAFHQ 620
           K +    +M  K   +  +  +  + C++ +N          GF  D E+ +  +I+ H+
Sbjct: 552 KVLELIREMTAKDIALDSKIISTIYTCLVANNEGKALLQSVPGF--DTEVSKGAVISSHE 609



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 231/459 (50%), Gaps = 20/459 (4%)

Query: 202 DIVTYTVLICGYC-QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           D V+Y  ++   C Q G ++  L L  VM  +  +   ++Y+ L+ ++C   R  +A+GL
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHE-TRPTAVSYTTLMRALCAERRTGQAVGL 135

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L +M+A G++PD+VTY  LIRGLC    V KA++L  EMC   I PN   +  +L G C+
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
                     F+ +       DVV+Y  +ID   + G + +A Q+  +++E+ + P++VT
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM- 439
           +N LI   CK G V +A  L + +   G+   AVTY T +        +   + LL+EM 
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315

Query: 440 --ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
             ET  + P  VT+  VI GLCK  ++++A Q+ + M   G   + +T+N +I    +  
Sbjct: 316 HGET-MVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVH 374

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            ++KA +L+++M    LEP S TY+ILI+G C    +  A+ LL  ++   I    V Y 
Sbjct: 375 KVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYI 434

Query: 558 TIIKAHCAEGDVHKAMTFF------CQ--------MVEKGFEISIRDYTKSFFCMMLSNG 603
            ++ A C +G + +A  FF      C+        M+     +  R   + F   ML  G
Sbjct: 435 PLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEG 494

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             PD     +++  F   GDLG+   +   M  SG +PD
Sbjct: 495 LIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPD 533



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 235/478 (49%), Gaps = 41/478 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R G   DA   + ++   + + +  +Y +L+  L   R T     L  D++ S    +V 
Sbjct: 90  RQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVV 149

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T   +I GLC  + +  A+  L+E       P+VV  + ++  YCK G  E    +F  M
Sbjct: 150 TYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEM 209

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI----------- 173
              G+ PD   Y  LI  LC  G +++A +  + M   G+EP+ +TY++           
Sbjct: 210 SGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSV 269

Query: 174 ----------LAKGFH--------LLSQISGAWKVIQKL-----LIKGS---DPDIVTYT 207
                     L KG          L++ +SG  ++ + +     +I G    +P++VT+ 
Sbjct: 270 KEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFN 329

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            +I G C+ G + +  ++R++M   G   N++ +++L+  + +  ++ +A+ L+ EM + 
Sbjct: 330 SVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASS 389

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL+PD  TYSILI G CK  +V +A  L ++M    I P    +  +L  LCE+ M+ +A
Sbjct: 390 GLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQA 449

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           R +FD +   NC  DVV Y+ MI G  +L +   A +  + ++++ + P  VT++ LI  
Sbjct: 450 RNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINM 508

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
           F  +G +  A R+L  +   G  P    + + +  Y  +G+ +++L L++EM  K I 
Sbjct: 509 FANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIA 566



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 151/329 (45%), Gaps = 31/329 (9%)

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           ++D V YN ++    + G   +A     +++     P+ V++ +L+   C   +   A  
Sbjct: 75  VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVG 134

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           LL  ++  G+ P  VTY T +   C+  ++ + + LL+EM    I P  V Y+ +++G C
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K  + +   ++ E+M   G+ PD + Y  +I S C+   ++KA Q++++M    LEP   
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYN+LI+ +C  G +K A  L  ++ E  ++L  V Y T+I       ++ +AM    +M
Sbjct: 255 TYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314

Query: 580 V--EKGFEISIRDYTKSF--FC-------------MMLSNGFPPDQEICEVMLIAFHQ-- 620
           +  E   E ++  +       C             MM  NG       C   L+ F+   
Sbjct: 315 IHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENG-------CACNLVTFNLLI 367

Query: 621 GG-----DLGSVFELAAVMIKSGLLPDKF 644
           GG      +    EL   M  SGL PD F
Sbjct: 368 GGLLRVHKVKKAMELMDEMASSGLEPDSF 396


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 166/580 (28%), Positives = 275/580 (47%), Gaps = 12/580 (2%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETPRNVY 64
           + +AV ++ K+       +I TYN+LL  L          D++  + D+     TP +V 
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN---GCTP-DVV 57

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +IDGL ++ R  +A    +E A +      V   A++    + G    A  ++  M
Sbjct: 58  TYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM 117

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             +G  PD  + + +I GL  AG +  A+     M   G+ P+ + YS L  G     ++
Sbjct: 118 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 177

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +++ ++      PD +TY VLI G C+ G+VE      + ML  G K +V  Y++L
Sbjct: 178 DCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 237

Query: 245 LSSMCKSGRIDEAL-GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +S  CK+G  D A   L  E    G   D+ TY+ ++  L K  K+ +A+ L  ++ +  
Sbjct: 238 ISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANG 297

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +P    + A+L GLC+   + EA      ++ + C  DVV Y  +IDG  K     EA 
Sbjct: 298 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 357

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L++++  + ++   V + +LI    + GK+  A  +  T+  HG  P  VT +T ++  
Sbjct: 358 KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 417

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            + G I   + + + ME + + P  V Y+ +I GLCK  K+  A+++L  M     TPD 
Sbjct: 418 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 477

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           ITYN +I   CK  D+  A    ++M     +P   TYNILI G C  G+   A  +   
Sbjct: 478 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 537

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +     S   V Y  +I   C    + KA  +F  M E+G
Sbjct: 538 MSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 145/521 (27%), Positives = 253/521 (48%), Gaps = 21/521 (4%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  P   +YN L++GLC  G +EEA++    +  +G  PD +TY+ L  G     +   A
Sbjct: 16  GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 75

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           +K+ +++ ++G   D V YT LI    Q G + +   + + M S G   +V+  S ++  
Sbjct: 76  YKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 135

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           + K+GRI  A+ +   MEA GL P+ V YS LI GLCK  K+  A+++  +M     +P+
Sbjct: 136 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 195

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ-LY 366
           +  +  ++ GLC+   +  AR +FD ++ + C  DV  YNI+I G+ K GN   A   L 
Sbjct: 196 TITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLA 255

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           ++      +  I T+ +++    KN K+ +A  L++ I  +G  P+  TY   +N  C+ 
Sbjct: 256 QETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKM 315

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G ++  + LL+++      P  VTYT +I GL K+ +  EA +L ++M + G+  D + Y
Sbjct: 316 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCY 375

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
             +IR   +   + +A  +   M  H   P   T + +IDGL   G +  A  +  S++ 
Sbjct: 376 TALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 435

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPP 606
             ++  +V Y+ +I   C    +  A+    QM             K  FC        P
Sbjct: 436 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQM-------------KKAFCT-------P 475

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           D     +++    + GD+ +       M+++G  PD +  N
Sbjct: 476 DTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYN 516



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 219/444 (49%), Gaps = 16/444 (3%)

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            +EE + L E + + G    +  Y+ LL+ +CK GR++EA+ LL ++   G  PD+VTY+
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            LI GL K+ +  +A +L+ EM  + ++ ++  + A++  L +   I +A   + ++   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
            C+ DVV  + MIDG  K G IG AV++++ +  + ++P+ V +++LI+G CK  K+  A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             +L  +K     P  +TY   ++  C+ G+++   A   EM      P   TY ++I G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 458 LCKQWKLQEAVQ-LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
            CK      A   L ++  + G T D  TY  I+    K K + +A  L+ ++  +   P
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           T ATYN L++GLC  G L+ A  LL  + ++  +   V YT++I     E    +A   F
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360

Query: 577 CQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQG 621
            +M  +G  +    YT                S +  M S+G  PD      M+    + 
Sbjct: 361 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 420

Query: 622 GDLGSVFELAAVMIKSGLLPDKFL 645
           G +G+   +   M   GL P++ +
Sbjct: 421 GRIGAAVRIFKSMEARGLAPNEVV 444



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 20/255 (7%)

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           K+ +A  L++ I  +G  P+  TY   +N  C+ G ++  + LL+++      P  VTYT
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I GL K+ +  EA +L ++M + G+  D + Y  +IR   +   + +A  +   M  H
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
              P   T + +IDGL   G +  A  +  S++   ++  +V Y+ +I   C    +  A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 573 MTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
           +    QM             K  FC        PD     V++    + GD+ +      
Sbjct: 181 LEMLAQM-------------KKAFCT-------PDTITYNVLIDGLCKSGDVEAARAFFD 220

Query: 633 VMIKSGLLPDKFLIN 647
            M+++G  PD +  N
Sbjct: 221 EMLEAGCKPDVYTYN 235


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 162/540 (30%), Positives = 262/540 (48%), Gaps = 28/540 (5%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVS 57
           +L   +S  G+V +A++V  KM   D+  ++Q  N +L  L      D MW +Y D+   
Sbjct: 131 VLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVAR 187

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NV T   +IDG C+Q     A     E   K+  P+VV    ++   C       A
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEA 247

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + +F  M   G+ P+ ++YN ++ G C    +++ALE   +M   G+ P+ +T+ IL  G
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDG 307

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A K +  +   G  P+I  Y  LI GYC+ GN+ E L L   +       +
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V  YS+L+  +C   R++EA GLL EM+  G  P+ VTY+ LI G CK+  + KAI++ +
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M  K I PN      ++ G C+   +  A   +  +++   + DVV Y  +IDG+ K G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N  EA +L++++ E  + P++ T + LI G CK+G+++DA      IKL   +    T  
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA------IKLFLAKTGTDTTG 541

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           +  N                E++     P HV YT +I+GLC   ++ +A +   DM   
Sbjct: 542 SKTN----------------ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCS 585

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD  T   II+   +   LR    L   +    + P S+ Y +L  G   +G LK+A
Sbjct: 586 GLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSA 645



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 258/520 (49%), Gaps = 36/520 (6%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           + +LI      G +EEAL     M    V P     +++  G     +    WKV   ++
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
            +G+ P++VTY  LI G C+ G+  +  +L + M+ +     V+ Y++L+  +C   RI 
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           EA  +   M   G+ P+L TY+ ++ G CK   V KA++LY EM    + PN    G ++
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILI 305

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            GLC+ + +  AR +   +     + ++ +YN +IDGY K GN+ EA+ L+ ++ +  I 
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P + T++ LI G C   ++ +A  LL  +K  G  P+AVTY T ++ YC+EGN+++ + +
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
             +M  K I P  +T++ +I G CK  K++ A+ L  +M + G+ PD + Y  +I    K
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS------------ 543
             + ++AF+L  +M    L P   T + LIDGLC +G + +A  L ++            
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545

Query: 544 -LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
            L     S   V YT +I+  C +G + KA  FF                      M  +
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSD--------------------MRCS 585

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           G  PD   C V++    +   L  V  L A ++K G++P+
Sbjct: 586 GLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 247/499 (49%), Gaps = 13/499 (2%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P++ + N ++    K G  +    ++  M+  G  P+  +Y  LI G C  G   +A   
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            ++M    + P  + Y+IL +G    S+IS A  + + +   G  P++ TY  ++ GYC+
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           I +V++ L+L   ML  G   NV+ + +L+  +CK+  +  A   L +M + G+ P++  
Sbjct: 276 IAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G CK   + +A+ L++E+    I P+ F +  ++ GLC  + + EA      + 
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
               + + V YN +IDGY K GN+ +A+++  Q+ EK I P+I+TF++LI G+CK GK+ 
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L   + + GL P  V YT  ++ + ++GN +    L +EM+   + P   T + +I
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515

Query: 456 KGLCKQWKLQEAVQLL-------------EDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            GLCK  ++ +A++L               ++     +P+ + Y  +I+  C    + KA
Sbjct: 516 DGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKA 575

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            +  + M    L P   T  ++I G      L++   L   + +  I      Y  + K 
Sbjct: 576 SKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKG 635

Query: 563 HCAEGDVHKAMTFFCQMVE 581
           +   G +  A++F  + V+
Sbjct: 636 YEESGYLKSALSFCGEGVQ 654



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 209/432 (48%), Gaps = 55/432 (12%)

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           S  F  NV  + VL+ +  + G ++EAL + Y+M+ +   P +   ++++ GL K+ +  
Sbjct: 121 SSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFD 175

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
              ++Y +M ++  SPN                                   VV Y  +I
Sbjct: 176 TMWKVYGDMVARGASPN-----------------------------------VVTYGTLI 200

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           DG  + G+  +A +L+ ++IEK+I P++V +  LI G C   ++++A  +  T++  G+ 
Sbjct: 201 DGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGML 260

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+  TY T M+ YC+  ++++ L L  EM    + P  VT+ ++I GLCK  ++  A + 
Sbjct: 261 PNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKF 320

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L DM   GV P+   YN +I  +CK  +L +A  L +++  H + P   TY+ILI GLC 
Sbjct: 321 LIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCG 380

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
              ++ AD LL  +++       V Y T+I  +C EG++ KA+    QM EKG E +I  
Sbjct: 381 VDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIIT 440

Query: 591 YTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
           ++                  +  M+  G  PD      ++    + G+    F L   M 
Sbjct: 441 FSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQ 500

Query: 636 KSGLLPDKFLIN 647
           ++GL P+ F ++
Sbjct: 501 EAGLHPNVFTLS 512



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 134/619 (21%), Positives = 245/619 (39%), Gaps = 103/619 (16%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y + G + +A+ + +++++ ++   + TY+ L+  L   D M +   L  ++K      N
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +IDG C++  ++ AI    +   K   P++++ + ++  YCK G  E A GL+ 
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+  GL PD  +Y  LI G    G+ +EA     +M   G+ P+  T S L  G     
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522

Query: 183 QISGAWKVIQKLLIKGSD---------------PDIVTYTVLICGYCQIGNVEEGLKLRE 227
           +IS A K+   L   G+D               P+ V YT LI G C  G + +  K   
Sbjct: 523 RISDAIKLF--LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M   G + +V    V++    ++  + + + L  ++  +G+ P+   Y +L +G  +  
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESG 640

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILL----GLCEKEMITEARMYFDSLIMSNCIQDV 343
            +  A+    E        NS   G+  +     LC   ++TE +    S + +  I   
Sbjct: 641 YLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQLC---VVTEKKECHSSYLTAFGIHSF 697

Query: 344 VLY------------NIMIDGYVKLGNIGE-----AVQLYRQLIEKRISPSIVTF----- 381
           VL             + ++     +G  G+     A+QL+RQ+      P IVT      
Sbjct: 698 VLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALS 757

Query: 382 ------------------------------NSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
                                         NSLI  + K G++  ARRL D  +    + 
Sbjct: 758 ACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQ----KK 813

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEM----------------ETKAIGPTHVTYTVVI 455
              T+T+ +  +   G  +  L L  EM                E+  + P  VT+  V+
Sbjct: 814 DVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVL 873

Query: 456 KGLCKQWKLQEAVQLLEDMYV-IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
                   ++E  Q    M     + P    +  ++   C+   L +A++ + +M    +
Sbjct: 874 MACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM---PV 930

Query: 515 EPTSATYNILIDGLCVNGD 533
            P +  +  L+    + GD
Sbjct: 931 RPNAVVWRTLLGACSLQGD 949



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 21/257 (8%)

Query: 406 LHGLEPSAVTYTTF---MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
           L  LE S  T   F   + A+ E G ++  L +  +M+   + P      +V+ GL K+ 
Sbjct: 116 LSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKG 172

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           +     ++  DM   G +P+ +TY T+I   C+  D  KAF+L ++M    + PT   Y 
Sbjct: 173 RFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYT 232

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           ILI GLC    +  A+ +  +++   +      Y T++  +C    V KA+  + +M+  
Sbjct: 233 ILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGD 292

Query: 583 GFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           G   ++  +                + F   M S G  P+  +   ++  + + G+L   
Sbjct: 293 GLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA 352

Query: 628 FELAAVMIKSGLLPDKF 644
             L + + K  +LPD F
Sbjct: 353 LSLHSEIEKHEILPDVF 369


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 194/739 (26%), Positives = 325/739 (43%), Gaps = 108/739 (14%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSE 58
           L   Y RTG +  A ++   M  +  + +  +Y  L+  L     + +   L+  +K   
Sbjct: 224 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDG 283

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              NV   + +I GLC+  R+ DA L           PSV++ NA++  Y KLG    A 
Sbjct: 284 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 343

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +  LM K G HPD ++YN LI+GLC   + EEA E  N+  + G  P  +T++ L  G+
Sbjct: 344 KIKELMEKNGCHPDDWTYNTLIYGLCDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGY 402

Query: 179 HLLSQISGAWKVIQKL------------------LIK-----------------GSDPDI 203
            +  +   A ++  K+                  LIK                 G  P++
Sbjct: 403 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 462

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           +TYT +I GYC+ G V+  L++ ++M   G + N   Y+ L+  + K  ++ +A+ LL +
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M+  G+ P+++TY+ L++G C +     A +L+  M    + P+  A+  +   LC+   
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 582

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
             EA   +  ++        V Y  +IDG+ K GN   A  L  ++I++  +P   T++ 
Sbjct: 583 AEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSV 639

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L++  CK  ++ +A  +LD + L G++ +   YT  ++    EG       +  EM +  
Sbjct: 640 LLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSG 699

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII----------RSF 493
             P+  TYTV I   CK+ +L++A  L+  M   GV PD +TYN +I          R+F
Sbjct: 700 HKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 759

Query: 494 CKCK-----------------------------------------DLRKAFQLLNQMWLH 512
              K                                         +L   +QLL +M  H
Sbjct: 760 STLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKH 819

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            L PT  TY+ LI G C  G L+ A  LL  +    +S  +  YT +IK  C      KA
Sbjct: 820 GLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKA 879

Query: 573 MTFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIA 617
           ++F   M E GF+  +  Y                KS FC +L  G+  D+   +++   
Sbjct: 880 LSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDG 939

Query: 618 FHQGGDLGSVFELAAVMIK 636
             + G +   F++ ++M K
Sbjct: 940 LLKAGYVDICFQMLSIMEK 958



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 161/613 (26%), Positives = 274/613 (44%), Gaps = 36/613 (5%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DA+  I +     L +S + YN  L +L     T+ M  +Y  +       +  T + +I
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
              C++  L  A    +        P   + NA++  YC+ G    A  LF +M   G  
Sbjct: 191 KSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 250

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
            + +SY ILI GLC A  + EAL     M R G  P+   ++ L  G     ++  A  +
Sbjct: 251 RNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 310

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              +   G  P ++TY  +I GY ++G + + LK++E+M   G   +   Y+ L+  +C 
Sbjct: 311 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD 370

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             + +EA  LL      G  P +VT++ LI G C  +K   A+++ N+M S +   +   
Sbjct: 371 Q-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 429

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
            G ++  L +K+ + EA+   + +  +  + +V+ Y  +IDGY K G +  A+++ + + 
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
                P+  T+NSL+YG  K+ K+  A  LL  ++  G+ P+ +TYTT +   C+E +  
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE------------------------ 466
               L + ME   + P    Y V+   LCK  + +E                        
Sbjct: 550 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGF 609

Query: 467 --------AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
                   A  L+E M   G TPD  TY+ ++ + CK K L +A  +L+QM L  ++ T 
Sbjct: 610 SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTI 669

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
             Y ILID +   G   +A  +   +       +   YT  I ++C EG +  A     +
Sbjct: 670 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILK 729

Query: 579 MVEKGFEISIRDY 591
           M  +G    +  Y
Sbjct: 730 MEREGVAPDVVTY 742



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 35/183 (19%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           S ++NL   DI W L + +        V T S +I G C+  RL++A L L    GK   
Sbjct: 798 SGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLS 857

Query: 96  PS-------------------VVSLNAIMSR----------------YCKLGFAEVAKGL 120
           P+                    +S  +IMS                  C  G  E  K L
Sbjct: 858 PNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSL 917

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FC +L+ G + D  ++ IL  GL  AG ++   +  + M +      + TY+++    H 
Sbjct: 918 FCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKMHE 977

Query: 181 LSQ 183
           +S 
Sbjct: 978 VSS 980


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 153/537 (28%), Positives = 278/537 (51%), Gaps = 6/537 (1%)

Query: 4   FVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD----IMWDLYDDIKVSET 59
           ++Y++  M+   + V  KM    +   ++  N +L  LR  D    +  ++Y+ +     
Sbjct: 127 WIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGI 186

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
              V T + ++D  C+Q ++Q+A+  L +       P+ V+ N +++     G  E AK 
Sbjct: 187 RPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKE 246

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   ML+ GL   A++Y+ LI G C  G ++EA     +M   G  P  +TY+ +  G  
Sbjct: 247 LIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLC 306

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++S A K++  ++ K   PD+V+Y  LI GY ++GN+ E   L   +  +G   +V+
Sbjct: 307 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVV 366

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L+  +C+ G +D A+ L  EM   G  PD+ T++IL+RG CK   +  A +L++EM
Sbjct: 367 TYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEM 426

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            ++ + P+ FA+   ++G  +    ++A    + ++      D++ YN+ IDG  KLGN+
Sbjct: 427 LNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNL 486

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA +L ++++   + P  VT+ S+I+     G +  AR +   +   G+ PS VTYT  
Sbjct: 487 KEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVL 546

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +++Y   G ++  +    EM  K + P  +TY  +I GLCK  K+ +A +   +M   G+
Sbjct: 547 IHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGI 606

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
           +P++ TY  +I   C     ++A +L   M    ++P S T++ L+  L  N D K+
Sbjct: 607 SPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL--NKDYKS 661



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 251/466 (53%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+VV+ N ++  +CK G  + A  L   M K G  P+  +YN+L++GL  +G +E+A E 
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKEL 247

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M R G+E  A TY  L +G+    Q+  A ++ +++L +G+ P +VTY  ++ G C+
Sbjct: 248 IQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCK 307

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G V +  KL +VM+++    ++++Y+ L+    + G I EA  L  E+   GL P +VT
Sbjct: 308 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVT 367

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI GLC+   +  A++L +EM      P+ F    ++ G C+   +  A+  FD ++
Sbjct: 368 YNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEML 427

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D   Y   I G +KLG+  +A  +  +++ +   P ++T+N  I G  K G + 
Sbjct: 428 NRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLK 487

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  L+  +  +GL P  VTYT+ ++A+   G++++  A+  EM +K I P+ VTYTV+I
Sbjct: 488 EASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLI 547

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
                + +L+ A+    +M+  GV P+ ITYN +I   CK + + +A++   +M    + 
Sbjct: 548 HSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGIS 607

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           P   TY ILI+  C  G  + A  L   + +  I      ++ ++K
Sbjct: 608 PNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLK 653



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 234/476 (49%), Gaps = 15/476 (3%)

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           S I  A +V   ++  G  P +VTY  ++  +C+ G V+E L+L   M   G   N + Y
Sbjct: 169 SSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTY 228

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL++ +  SG +++A  L+ EM  +GL+    TY  LIRG C++ ++ +A +L  EM S
Sbjct: 229 NVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLS 288

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +   P    +  I+ GLC+   +++AR   D ++  N + D+V YN +I GY +LGNIGE
Sbjct: 289 RGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGE 348

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+ +L  + + PS+VT+N+LI G C+ G +  A RL D +  HG +P   T+T  + 
Sbjct: 349 AFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVR 408

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C+ GN+     L  EM  + + P    Y   I G  K     +A  + E+M   G  P
Sbjct: 409 GFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPP 468

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D ITYN  I    K  +L++A +L+ +M  + L P   TY  +I    + G L+ A  + 
Sbjct: 469 DLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVF 528

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK-------- 593
           + +    I  + V YT +I ++   G +  A+  F +M EKG   ++  Y          
Sbjct: 529 LEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKV 588

Query: 594 -------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                   FF  M + G  P++    +++      G       L   M+   + PD
Sbjct: 589 RKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPD 644



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 238/486 (48%), Gaps = 1/486 (0%)

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA-GSMEEALEFTNDMGRHGVEP 166
           Y K    E    +F  M+  G+ PD  + N ++  L     S++ A E  N M   G+ P
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRP 188

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
             +TY+ +   F    ++  A +++ ++   G  P+ VTY VL+ G    G +E+  +L 
Sbjct: 189 TVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELI 248

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           + ML  G +++   Y  L+   C+ G++DEA  L  EM + G  P LVTY+ ++ GLCK 
Sbjct: 249 QEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKW 308

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            +V  A +L + M +K + P+  ++  ++ G      I EA + F  L     +  VV Y
Sbjct: 309 GRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTY 368

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N +IDG  ++G++  A++L  ++I+    P + TF  L+ GFCK G +  A+ L D +  
Sbjct: 369 NTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLN 428

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            GL+P    Y T +    + G+  +   + +EM  +   P  +TY V I GL K   L+E
Sbjct: 429 RGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKE 488

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A +L++ M   G+ PD +TY +II +      LRKA  +  +M    + P+  TY +LI 
Sbjct: 489 ASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIH 548

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
              V G LK A      + E  +    + Y  +I   C    + +A  FF +M  KG   
Sbjct: 549 SYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISP 608

Query: 587 SIRDYT 592
           +   YT
Sbjct: 609 NKYTYT 614



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 245/478 (51%), Gaps = 8/478 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR---- 61
           + + G V +A+ ++ +M+++    +  TYN L+  L H+  +    + I+  E  R    
Sbjct: 200 FCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQ--EMLRLGLE 257

Query: 62  -NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            + YT   +I G C++ +L +A    +E   +   P++V+ N IM   CK G    A+ L
Sbjct: 258 VSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKL 317

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             +M+   L PD  SYN LI+G    G++ EA     ++   G+ P  +TY+ L  G   
Sbjct: 318 LDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCR 377

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +  +  A ++  +++  G DPD+ T+T+L+ G+C++GN+    +L + ML++G + +  A
Sbjct: 378 MGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFA 437

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y   +    K G   +A G+  EM A G  PDL+TY++ I GL K   + +A +L  +M 
Sbjct: 438 YITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKML 497

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
              + P+   + +I+        + +AR  F  ++       VV Y ++I  Y   G + 
Sbjct: 498 YNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLK 557

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A+  + ++ EK + P+++T+N+LI G CK  K+  A +    ++  G+ P+  TYT  +
Sbjct: 558 LAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILI 617

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
           N  C  G+ Q  L L ++M  + I P   T++ ++K L K +K    V+ LE++   G
Sbjct: 618 NENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYK-SHVVRHLENVIAAG 674



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 204/414 (49%), Gaps = 24/414 (5%)

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL---CKQDKV 289
           GFK + + Y+V+L  + ++G +  A  ++ ++ +V ++  +V   IL   L    K+  +
Sbjct: 76  GFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKSML 135

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM-ITEARMYFDSLIMSNCIQDVVLYNI 348
            K + ++ +M SK + P+      +L  L +++  I  AR  ++ ++       VV YN 
Sbjct: 136 EKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNT 195

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           M+D + K G + EA+QL  Q+ +    P+ VT+N L+ G   +G++  A+ L+  +   G
Sbjct: 196 MLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLG 255

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           LE SA TY   +  YCE+G +     L +EM ++   PT VTY  ++ GLCK  ++ +A 
Sbjct: 256 LEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDAR 315

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +LL+ M    + PD ++YNT+I  + +  ++ +AF L  ++    L P+  TYN LIDGL
Sbjct: 316 KLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGL 375

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C  GDL  A  L   + +H        +T +++  C  G++  A                
Sbjct: 376 CRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMA---------------- 419

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
               K  F  ML+ G  PD+      ++   + GD    F +   M+  G  PD
Sbjct: 420 ----KELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPD 469



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 146/287 (50%), Gaps = 20/287 (6%)

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           +I  A ++Y  ++E  I P++VT+N+++  FCK GKV +A +LL  ++  G  P+ VTY 
Sbjct: 170 SIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYN 229

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N     G +++   L+QEM    +  +  TY  +I+G C++ +L EA +L E+M   
Sbjct: 230 VLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSR 289

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G  P  +TYNTI+   CK   +  A +LL+ M   NL P   +YN LI G    G++  A
Sbjct: 290 GAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEA 349

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             L   L+   +  + V Y T+I   C  GD+  AM    +M++ G +  +  +T     
Sbjct: 350 FLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFT----- 404

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
            +L  GF      C++        G+L    EL   M+  GL PD+F
Sbjct: 405 -ILVRGF------CKL--------GNLPMAKELFDEMLNRGLQPDRF 436


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 163/565 (28%), Positives = 276/565 (48%), Gaps = 25/565 (4%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L++AI    +       P   S N ++ R+ KLG  +  K  F  M+  G  P  F+YNI
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 267

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           +I  +C  G +E A     +M   G+ PD +TY+ +  GF  + ++       +++    
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
            +PD++TY  LI  +C+ G +  GL+    M   G K NV++YS L+ + CK G + +A+
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
               +M  VGL P+  TY+ LI   CK   +  A +L NEM    +  N   + A++ GL
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C+ E + EA   F  +  +  I ++  YN +I G+VK  N+  A++L  +L  + I P +
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           + + + I+G C   K+  A+ +++ +K  G++ +++ YTT M+AY + GN    L LL E
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV-IGVTPDQITYNTIIRSFCKCK 497
           M+   I  T VT+ V+I GLCK   + +AV     +    G+  +   +  +I   CK  
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            +  A  L  QM    L P    Y  L+DG    G++  A  L   + E  + L  +AYT
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687

Query: 558 TIIK--AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
           +++   +HC +  + KA +F  +M+ +G                      PD+ +C  +L
Sbjct: 688 SLVWGLSHCNQ--LQKARSFLEEMIGEGIH--------------------PDEVLCISVL 725

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLL 640
              ++ G +    EL + ++K  LL
Sbjct: 726 KKHYELGCIDEAVELQSYLMKHQLL 750



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 254/511 (49%), Gaps = 4/511 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTN 66
           GM+ +A+   +KMK   +    ++ N LL+    L  TD +   + D+  +     V+T 
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+ID +C++  ++ A    +E   +   P  V+ N+++  + K+G  +     F  M  
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
               PD  +YN LI+  C  G +   LEF  +M  +G++P+ ++YS L   F     +  
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A K    +   G  P+  TYT LI   C+IGN+ +  +L   ML  G + NV+ Y+ L+ 
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C + R+ EA  L  +M+  G+ P+L +Y+ LI G  K   + +A++L NE+  + I P
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +G  + GLC  E I  A++  + +       + ++Y  ++D Y K GN  E + L 
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH-GLEPSAVTYTTFMNAYCE 425
            ++ E  I  ++VTF  LI G CKN  V+ A    + I    GL+ +A  +T  ++  C+
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +  ++    L ++M  K + P    YT ++ G  KQ  + EA+ L + M  IG+  D + 
Sbjct: 626 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 685

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           Y +++     C  L+KA   L +M    + P
Sbjct: 686 YTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 232/498 (46%), Gaps = 36/498 (7%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P     +A+ S    LG  E A   F  M ++ + P   S N L+H     G  ++   F
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             DM   G  P   TY+I+         +  A  + +++  +G  PD VTY  +I G+ +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +G +++ +   E M     + +VI Y+ L++  CK G++   L    EM+  GLKP++V+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           YS L+   CK+  + +AI+ Y +M    + PN +                     + SLI
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT--------------------YTSLI 409

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            +NC               K+GN+ +A +L  ++++  +  ++VT+ +LI G C   ++ 
Sbjct: 410 DANC---------------KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  L   +   G+ P+  +Y   ++ + +  N+ R L LL E++ + I P  + Y   I
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLC   K++ A  ++ +M   G+  + + Y T++ ++ K  +  +   LL++M   ++E
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574

Query: 516 PTSATYNILIDGLCVNGDLKNA-DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            T  T+ +LIDGLC N  +  A D       +  +      +T +I   C +  V  A T
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634

Query: 575 FFCQMVEKGFEISIRDYT 592
            F QMV+KG       YT
Sbjct: 635 LFEQMVQKGLVPDRTAYT 652



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 209/434 (48%), Gaps = 4/434 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           + + G + D V    +MK++  +  + TYN+L+          I  + Y ++K +    N
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V + S ++D  C++  +Q AI F  +       P+  +  +++   CK+G    A  L  
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML+ G+  +  +Y  LI GLC A  M+EA E    M   GV P+  +Y+ L  GF    
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A +++ +L  +G  PD++ Y   I G C +  +E    +   M   G K N + Y+
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+ +  KSG   E L LL EM+ + ++  +VT+ +LI GLCK   V KA+  +N + + 
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 606

Query: 303 -RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +  N+    A++ GLC+   +  A   F+ ++    + D   Y  ++DG  K GN+ E
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ L  ++ E  +   ++ + SL++G     ++  AR  L+ +   G+ P  V   + + 
Sbjct: 667 ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 726

Query: 422 AYCEEGNIQRLLAL 435
            + E G I   + L
Sbjct: 727 KHYELGCIDEAVEL 740



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 163/355 (45%), Gaps = 36/355 (10%)

Query: 327 ARMYFDS------LIMSNCIQDV--VLY---NIMIDGY----------VKLGNIGEAVQL 365
           ARMY+D+      +++S    DV  VL+   N+ + G+          + LG + EA+Q 
Sbjct: 155 ARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQC 214

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           + ++   R+ P   + N L++ F K GK  D +R    +   G  P+  TY   ++  C+
Sbjct: 215 FSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK 274

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           EG+++    L +EM+ + + P  VTY  +I G  K  +L + V   E+M  +   PD IT
Sbjct: 275 EGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVIT 334

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YN +I  FCK   L    +   +M  + L+P   +Y+ L+D  C  G ++ A    V ++
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------------- 592
              +   +  YT++I A+C  G++  A     +M++ G E ++  YT             
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454

Query: 593 --KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
             +  F  M + G  P+      ++  F +  ++    EL   +   G+ PD  L
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 166/628 (26%), Positives = 305/628 (48%), Gaps = 46/628 (7%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           V+ +M +L    ++ +YN LL  L          +++  + DD    + P +V + + VI
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD--GGDCPPDVVSYTTVI 206

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +G  ++  L  A     E   +   P+VV+ ++I++  CK    + A  +   M+K G+ 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  +YN ++HG C +G  +EA+ F   M   GVEPD +TY+ L        + + A K+
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              +  +G  P+I TY  L+ GY   G + E   L ++M+  G   N   +S+L+ +  K
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++D+A+ +  +M   GL PD VTY  +I  LCK  +V  A++ + +M  +R+SP +  
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + +++  LC  +   +A+     ++      D + +N +ID + K G + E+ +L+  ++
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
              + P I+T+++LI G+C  GK+ +A +LL ++   G++P  VTY T +N YC+   ++
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             L L +EME+  + P  +TY ++++GL +  +   A +L   +   G   +  TYN I+
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV-------- 542
              CK     +A ++   + L +L+  + T+NI+I  L   G    A  L          
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686

Query: 543 ---------------------------SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
                                      S++E+  +       +I++     GD+ +A T+
Sbjct: 687 PDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNG 603
              + EK F  S+   T S F  +LS G
Sbjct: 747 LFMIDEKHF--SLEASTASLFLDLLSGG 772



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 164/643 (25%), Positives = 284/643 (44%), Gaps = 53/643 (8%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E   N+ T  I+I   C   RL      L     K F    ++   ++   C       A
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 118 KGLFCL-MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE--PDAITYSIL 174
             +    M + G  P+ FSYNIL+ GLC     +EALE    M   G +  PD ++Y+ +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             GF     +  A+    ++L +G  P++VTY+ +I   C+   +++ +++   M+  G 
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             N   Y+ ++   C SG+  EA+G L +M + G++PD+VTY+ L+  LCK  +  +A +
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           +++ M  + + P    +G +L G   K  + E     D ++ +    +  +++I+I  Y 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K G + +A+ ++ ++ ++ ++P  VT+ ++I   CK+G+V DA R  + +    L P  +
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 415 TY-------------------------------TTFMNA----YCEEGNIQRLLALLQEM 439
            Y                               T F N+    +C+EG +     L   M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
               + P  +TY+ +I G C   K+ EA +LL  M  +G+ PD +TYNT+I  +CK   +
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
             A  L  +M    + P   TYNI++ GL        A  L V + E    L    Y  I
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 560 IKAHCAEGDVHKAMTFF-------CQMVEKGFEISI--------RDYTKSFFCMMLSNGF 604
           +   C      +A+  F        Q+  + F I I         D  K  F  + +NG 
Sbjct: 626 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGL 685

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            PD     +M     + G L  + +L   M ++G   +  ++N
Sbjct: 686 VPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 146/580 (25%), Positives = 269/580 (46%), Gaps = 22/580 (3%)

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG---LHPDAFSY 136
           +DA     E   +  G S+  LN  ++   +   A  A   +  M + G   + P+  +Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGADEVTPNLCTY 94

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
            ILI   C AG ++       ++ + G   DAI ++ L KG     + S A  ++ + + 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 197 K-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--NVIAYSVLLSSMCKSGR 253
           + G  P++ +Y +L+ G C     +E L+L ++M   G     +V++Y+ +++   K G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +D+A G  +EM   G+ P++VTYS +I  LCK   + KA+++   M    + PN   + +
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           I+ G C      EA  +   +       DVV YN ++D   K G   EA +++  + ++ 
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           + P I T+ +L+ G+   G + +   LLD +  +G+ P+   ++  + AY ++G + + +
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            +  +M  + + P  VTY  VI  LCK  ++++A++  E M    ++P  I YN++I S 
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C      KA +L+ +M    +   +  +N +ID  C  G +  ++ L   +    +    
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTK--------SFFCM 598
           + Y+T+I  +C  G + +A      MV  G       +   I  Y K          F  
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
           M S+G  PD     ++L    Q     +  EL   + +SG
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 182/379 (48%), Gaps = 5/379 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y++ G V  A+ V +KM++  L     TY +++  L    R  D M      I  
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
             +P N+  NS+ I  LC   +   A   + E   +      +  N+I+  +CK G    
Sbjct: 439 RLSPGNIVYNSL-IHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           ++ LF LM++ G+ PD  +Y+ LI G C+AG M+EA +    M   G++PD +TY+ L  
Sbjct: 498 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+  +S++  A  + +++   G  PDI+TY +++ G  Q        +L   +   G +L
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +  Y+++L  +CK+   DEAL +   +    L+ +  T++I+I  L K  +  +A  L+
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             + +  + P+   +  +   L E+ ++ E    F S+  + C  +  + N ++   ++ 
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737

Query: 357 GNIGEAVQLYRQLIEKRIS 375
           G+I  A      + EK  S
Sbjct: 738 GDITRAGTYLFMIDEKHFS 756


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 244/489 (49%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+V    +++   K+        L   M  +G+ P+ ++ NILI+  C    +  A   
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              + + G +PD  T++ L +G  +  +I  A  +  K++ +G  P++VTY  LI G C+
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +GN    ++L   M     + +V+ Y+ ++ S+CK  ++ EA  L  +M   G+ PD+ T
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ L+  LC   +      L N+M + +I P+      ++  LC++  +TEA    D +I
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 DVV Y  ++DG+     + EAV+++  ++ K  +P ++++ +LI G+CK  K+ 
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 362

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L + +      P   TY T M   C  G +Q  +AL  EM  +   P  VTY++++
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 422

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             LCK   L+EA+ LL+ +    + PD   YN II   C+  +L  A  L + +    L 
Sbjct: 423 DSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLH 482

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P+  TYNI+I GLC  G L  A+ L + +  ++ S     Y TI +      +  +A+  
Sbjct: 483 PSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQL 542

Query: 576 FCQMVEKGF 584
             +M+ +GF
Sbjct: 543 LEEMLARGF 551



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 227/455 (49%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+V +LN +++ +C L     A  +   +LK G  PD  ++  LI GLC+ G + EAL  
Sbjct: 98  PNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHL 157

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + M   G +P+ +TY  L  G   +   S A ++++ +      PD+V YT +I   C+
Sbjct: 158 FDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCK 217

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              V E   L   M+ QG   ++  Y+ L+ ++C          LL +M    + PD+V 
Sbjct: 218 DRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI 277

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           +S ++  LCK+ KV +A ++ + M  + + P+   +  ++ G C +  + EA   FD ++
Sbjct: 278 FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMV 337

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 DV+ Y  +I+GY K+  I +A+ L+ ++  K   P   T+N+L+YG C  G++ 
Sbjct: 338 RKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQ 397

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           DA  L   +   G  P  VTY+  +++ C+  +++  +ALL+ +E   + P    Y ++I
Sbjct: 398 DAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIII 457

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G+C+  +L+ A  L  ++   G+ P   TYN +I   CK   L +A +L  +M  ++  
Sbjct: 458 DGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCS 517

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
           P   TYN +  G   N +   A  LL  +     S
Sbjct: 518 PDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 552



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 247/501 (49%), Gaps = 3/501 (0%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           + DA+    ++  +    SI  +  LL +   ++H   +  L   +     P NVYT +I
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+  C  +R+  A   L +       P   +   ++   C  G    A  LF  M+  G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P+  +Y  LI+GLC  G+   A+     M +   +PD + Y+ +        Q++ A+
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            +  +++ +G  PDI TYT L+   C +   +    L   M++     +V+ +S ++ ++
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK G++ EA  ++  M   G++PD+VTY+ L+ G C Q ++ +A+++++ M  K  +P+ 
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 345

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
            ++  ++ G C+   I +A   F+ +     I D   YN ++ G   +G + +A+ L+ +
Sbjct: 346 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHE 405

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           ++ +   P +VT++ L+   CKN  + +A  LL  I+   L P    Y   ++  C  G 
Sbjct: 406 MVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 465

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           ++    L   + +K + P+  TY ++I GLCK+  L EA +L  +M     +PD  TYNT
Sbjct: 466 LEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNT 525

Query: 489 IIRSFCKCKDLRKAFQLLNQM 509
           I R F +  +  +A QLL +M
Sbjct: 526 IARGFLQNNETLRAIQLLEEM 546



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 226/518 (43%), Gaps = 51/518 (9%)

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
           +K  H  + +  A     +LL     P IV +  L+    ++ +    L L   M S G 
Sbjct: 38  SKSLHF-NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGV 96

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             NV   ++L++S C   R+  A  +L ++  +G +PD  T++ LIRGLC + K+ +A+ 
Sbjct: 97  PPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALH 156

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L+++M  +   PN   +G ++ GLC+    + A     S+   NC  DVV+Y  +ID   
Sbjct: 157 LFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLC 216

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC------------------------- 389
           K   + EA  L+ Q++ + ISP I T+ SL++  C                         
Sbjct: 217 KDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVV 276

Query: 390 ----------KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
                     K GKV +A  ++D +   G+EP  VTYTT M+ +C +  +   + +   M
Sbjct: 277 IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 336

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
             K   P  ++YT +I G CK  K+ +A+ L E+M      PD  TYNT++   C    L
Sbjct: 337 VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRL 396

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
           + A  L ++M      P   TY+IL+D LC N  L+ A  LL +++  N++     Y  I
Sbjct: 397 QDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNII 456

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGF 604
           I   C  G++  A   F  +  KG   S+  Y                   F  M  N  
Sbjct: 457 IDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDC 516

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            PD      +   F Q  +     +L   M+  G   D
Sbjct: 517 SPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 215/433 (49%), Gaps = 9/433 (2%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K+   P +  T + +I GLC + ++ +A+    +   + F P+VV+   +++  CK+G 
Sbjct: 127 LKLGHQP-DPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 185

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A  L   M +    PD   Y  +I  LC    + EA    + M   G+ PD  TY+ 
Sbjct: 186 TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTS 245

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSD----PDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           L    H L  +   WK +  LL +  +    PD+V ++ ++   C+ G V E  ++ ++M
Sbjct: 246 LV---HALCNLC-EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 301

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           + +G + +V+ Y+ L+   C    +DEA+ +   M   G  PD+++Y+ LI G CK  K+
Sbjct: 302 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKI 361

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            KA+ L+ EMC K   P++  +  ++ GLC    + +A   F  ++    + D+V Y+I+
Sbjct: 362 DKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSIL 421

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           +D   K  ++ EA+ L + +    ++P I  +N +I G C+ G++  AR L   +   GL
Sbjct: 422 LDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGL 481

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            PS  TY   ++  C+ G +     L  EM+     P   TY  + +G  +  +   A+Q
Sbjct: 482 HPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQ 541

Query: 470 LLEDMYVIGVTPD 482
           LLE+M   G + D
Sbjct: 542 LLEEMLARGFSAD 554



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 194/371 (52%), Gaps = 3/371 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G    A+ ++  M++ + +  +  Y S++ +L   R     ++L+  +       +++
Sbjct: 182 KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF 241

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + ++  LC     +     L +    +  P VV  + ++   CK G    A  +  +M
Sbjct: 242 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 301

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G+ PD  +Y  L+ G C+   M+EA++  + M R G  PD I+Y+ L  G+  + +I
Sbjct: 302 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKI 361

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  + +++  K   PD  TY  L+ G C +G +++ + L   M+++G   +++ YS+L
Sbjct: 362 DKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSIL 421

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L S+CK+  ++EA+ LL  +EA  L PD+  Y+I+I G+C+  ++  A  L++ + SK +
Sbjct: 422 LDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGL 481

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+ + +  ++ GLC++ ++ EA   F  +  ++C  D   YN +  G+++      A+Q
Sbjct: 482 HPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQ 541

Query: 365 LYRQLIEKRIS 375
           L  +++ +  S
Sbjct: 542 LLEEMLARGFS 552



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 130/247 (52%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T + ++DG C QS + +A+        K F P V+S   +++ YCK+   + A  LF
Sbjct: 309 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF 368

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M +    PD  +YN L++GLC  G +++A+   ++M   G  PD +TYSIL       
Sbjct: 369 EEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKN 428

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A  +++ +     +PDI  Y ++I G C+ G +E    L   + S+G   +V  Y
Sbjct: 429 RHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTY 488

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++++  +CK G ++EA  L  EM+     PD  TY+ + RG  + ++  +AIQL  EM +
Sbjct: 489 NIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLA 548

Query: 302 KRISPNS 308
           +  S +S
Sbjct: 549 RGFSADS 555



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 3/200 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y +   +  A+++  +M   +     +TYN+L+Y L H   + D   L+ ++       +
Sbjct: 355 YCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPD 414

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T SI++D LC+   L++A+  L+        P +   N I+   C+ G  E A+ LF 
Sbjct: 415 LVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFS 474

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   GLHP  ++YNI+IHGLC  G + EA +   +M  +   PD  TY+ +A+GF   +
Sbjct: 475 NLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNN 534

Query: 183 QISGAWKVIQKLLIKGSDPD 202
           +   A ++++++L +G   D
Sbjct: 535 ETLRAIQLLEEMLARGFSAD 554



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 3/162 (1%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G + DA+ +  +M        + TY+ LL +L   RH +    L   I+ S    ++   
Sbjct: 394 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVY 453

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+IDG+C+   L+ A       + K   PSV + N ++   CK G    A  LF  M  
Sbjct: 454 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDG 513

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
               PD  +YN +  G         A++   +M   G   D+
Sbjct: 514 NDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 169/606 (27%), Positives = 282/606 (46%), Gaps = 30/606 (4%)

Query: 41  LRHTDIMWDLYDDIKVSETPRNVYTNSI-----VIDGLCQQSRLQDAI-LFLQETAGKEF 94
           LR     WD++D +  +   RNV          +   L +   L++A   FL+    + F
Sbjct: 161 LRRVLPSWDVFDLLWAT---RNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVF 217

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
            P   S NA++ R  K+G  ++++  F  M   G+    F+YNI+I  LC  G +E A  
Sbjct: 218 -PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARS 276

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
               M   G  PD +TY+ L  G   L  +     + +++     DPD++TY  LI  +C
Sbjct: 277 LFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFC 336

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           +   + +  +    M + G K NV+ YS  + + CK G + EA+    +M  V L P+  
Sbjct: 337 KFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEF 396

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+ LI   CK   + +A++L  E+    I  N   + A+L GLCE+  + EA   F ++
Sbjct: 397 TYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAM 456

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           + +    +   Y  ++ G++K   +  A  + +++ EK I P ++ + ++++G C   ++
Sbjct: 457 LNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRL 516

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +A+ L+  IK  G+  +AV YTT M+AY + G     L LL+EM    +  T VTY  +
Sbjct: 517 EEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCAL 576

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I GLCK   +QEA+     M  IG+ P+   Y  ++   CK      A +L ++M    +
Sbjct: 577 IDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGM 636

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P    Y  LIDG   +G+L+ A  L   + E  + L   AYT +I      G V KA  
Sbjct: 637 MPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARN 696

Query: 575 FFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
              +M+ K                    G  PD+ +   ++  ++  G +    EL   M
Sbjct: 697 LLDEMIGK--------------------GVLPDEVVYMCLIKKYYALGKVDEALELQNEM 736

Query: 635 IKSGLL 640
            K G++
Sbjct: 737 AKRGMI 742



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 216/442 (48%), Gaps = 3/442 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRN 62
           + + G++ + + +  +MK+ D    + TYN+L+      + M   ++   ++K +    N
Sbjct: 300 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPN 359

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T S  ID  C++  LQ+AI F  +       P+  +  +++   CK G    A  L  
Sbjct: 360 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE 419

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +L+ G+  +  +Y  L+ GLC  G M+EA E    M   GV P+  TY+ L  GF    
Sbjct: 420 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 479

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A  +++++  K   PD++ Y  ++ G C    +EE   L   +   G   N + Y+
Sbjct: 480 EMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYT 539

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+ +  KSG+  EAL LL EM  +GL    VTY  LI GLCK   V +A+  +  M   
Sbjct: 540 TLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEI 599

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN   + A++ GLC+      A+  FD ++    + D + Y  +IDG +K GN+ EA
Sbjct: 600 GLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEA 659

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + L  ++IE  +   +  + +LI+G   +G+V  AR LLD +   G+ P  V Y   +  
Sbjct: 660 LNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKK 719

Query: 423 YCEEGNIQRLLALLQEMETKAI 444
           Y   G +   L L  EM  + +
Sbjct: 720 YYALGKVDEALELQNEMAKRGM 741



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 158/322 (49%), Gaps = 15/322 (4%)

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           C+    +++ +    ++LG + EA + + ++ + R+ P   + N+L++   K G+   +R
Sbjct: 181 CVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSR 240

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           +    +   G++ S  TY   ++  C+EG+++   +L  +M+     P  VTY  +I G 
Sbjct: 241 KFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 300

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
            K   L E + + E M      PD ITYN +I  FCK + + KAF+ L++M  + L+P  
Sbjct: 301 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNV 360

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TY+  ID  C  G L+ A    V ++   ++  +  YT++I A+C  G++ +A+    +
Sbjct: 361 VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEE 420

Query: 579 MVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           +++ G ++++  YT               +  F  ML+ G  P+QE    ++  F +  +
Sbjct: 421 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 480

Query: 624 LGSVFELAAVMIKSGLLPDKFL 645
           +    ++   M +  + PD  L
Sbjct: 481 MEYAKDILKEMKEKCIKPDLLL 502



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 134/307 (43%), Gaps = 38/307 (12%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G + +A  V   M    +  + +TY +L++     +  +   D+  ++K      ++   
Sbjct: 444 GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLY 503

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
             ++ GLC +SRL++A L + E        + V    +M  Y K G A  A  L   ML 
Sbjct: 504 GTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD 563

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL     +Y  LI GLC +G ++EA+     M   G++P+   Y+ L  G    +    
Sbjct: 564 LGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEV 623

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A K+  ++L KG  PD + YT LI G  + GN++E L LR+ M+  G +L++ AY+ L+ 
Sbjct: 624 AKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIW 683

Query: 247 SMCKSG-----------------------------------RIDEALGLLYEMEAVGLKP 271
            +  SG                                   ++DEAL L  EM   G+  
Sbjct: 684 GLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMIT 743

Query: 272 DLVTYSI 278
            L  +++
Sbjct: 744 GLSDHAV 750


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 179/680 (26%), Positives = 330/680 (48%), Gaps = 40/680 (5%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVS 57
           ++A  Y R G V  AV  + +M+ + L+V++  Y++++     +  T+    + + ++  
Sbjct: 223 IMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRK 282

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVV---SLNAIMSRYCKLGFA 114
               NV T ++++ G C+  R+++A   ++E   KE G  VV   +   +++ YC+ G  
Sbjct: 283 GLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM--KETGDIVVDEVAYGMMINGYCQRGRM 340

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           + A  +   M   G+H + F YN +I+GLC  G MEE  +   +M   G+ PD  +Y+ L
Sbjct: 341 DDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTL 400

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G+     +  A+++ + ++  G     +TY  L+ G+C +  +++ L+L  +ML +G 
Sbjct: 401 IDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGV 460

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             N I+ S LL  + K+G+ ++AL L  E  A GL  +++T++ +I GLCK  ++ +A +
Sbjct: 461 APNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEE 520

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L + M   R  P+S  +  +  G C+   +  A    + +        V ++N  I G+ 
Sbjct: 521 LLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHF 580

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
                 +   ++ ++  + +SP++VT+ +LI G+CK G + +A  L   +  +G+ P+  
Sbjct: 581 IAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVF 640

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEM-----------------------ETKAIGPTH--- 448
             +  M+ + +EG +     +LQ++                       +T A G  H   
Sbjct: 641 ICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSAN 700

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           V + V+I GLCK  ++ +A  L E +      PD  TY+++I        + +AF L + 
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    L P   TYN LI GLC +G L  A  L   LQ   IS   + Y T+I  +C EG 
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820

Query: 569 VHKAMTFFCQMVEKGF-EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
             +A     +MVE+G+ E +I+         M+ N   P+      ++  + + G++  +
Sbjct: 821 TTEAFKLKQKMVEEGYMEEAIK-----LLDQMIENNVDPNYITYCTLIHGYIKSGNMEEI 875

Query: 628 FELAAVMIKSGLLPDKFLIN 647
            +L   M   GLLP  ++ N
Sbjct: 876 SKLYDEMHIRGLLPTNWIGN 895



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 158/654 (24%), Positives = 309/654 (47%), Gaps = 49/654 (7%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVS 57
           +L   ++  G +  A+ V   M ++  + S+++ N LL  L  +    +   +Y  ++++
Sbjct: 153 LLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIA 212

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               + +T +I+    C+  R+  A+ F++E  G     ++V+ +A+M  YC +G+ E A
Sbjct: 213 GVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDA 272

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + +   + + GL P+  +Y +L+ G C  G MEEA     +M   G   D +        
Sbjct: 273 RRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG---DIVV------- 322

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                                   D V Y ++I GYCQ G +++  ++R  M   G  +N
Sbjct: 323 ------------------------DEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVN 358

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +  Y+ +++ +CK GR++E   +L EME VG++PD  +Y+ LI G C++  + KA ++  
Sbjct: 359 LFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCR 418

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEA-RMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            M    ++  +  +  +L G C    I +A R++F  ++      + +  + ++DG  K 
Sbjct: 419 MMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF-LMLKRGVAPNEISCSTLLDGLFKA 477

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   +A+ L+++ + + ++ +++TFN++I G CK G++A+A  LLD +K     P ++TY
Sbjct: 478 GKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTY 537

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG--LCKQWKLQEAVQLLEDM 474
            T  + YC+ G +     L+ +ME     P+   +   I G  + KQW   +   +  +M
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW--HKVNDIHSEM 595

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G++P+ +TY  +I  +CK  +L +A  L  +M  + + P     + L+      G +
Sbjct: 596 SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKV 655

Query: 535 KNADCLLVSLQEHN------ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
             A+ +L  L   +      IS  ++   + +    A+G+ H A   +  ++    +   
Sbjct: 656 DEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGR 715

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
               KS F  + +  F PD      ++      G +   F L  VM+ +GL P+
Sbjct: 716 IADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 259/526 (49%), Gaps = 7/526 (1%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           ++F  S VS + ++  +   G    A  +F  M K G  P   S N L++ L  +G    
Sbjct: 142 RDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGM 201

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A      M   GV PD  T +I+AK +    +++ A + ++++   G + ++V Y  ++ 
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG-LK 270
            YC +G  E+  ++ E +  +G   NV+ Y++L+   CK GR++EA  ++ EM+  G + 
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
            D V Y ++I G C++ ++  A ++ NEM    I  N F +  ++ GLC+   + E +  
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
              +       D   YN +IDGY + G++ +A ++ R ++   ++ + +T+N+L+ GFC 
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
              + DA RL   +   G+ P+ ++ +T ++   + G  ++ L L +E   + +    +T
Sbjct: 442 LHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVIT 501

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           +  VI GLCK  ++ EA +LL+ M  +   PD +TY T+   +CK   L  A  L+N+M 
Sbjct: 502 FNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKME 561

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
                P+   +N  I G  +       + +   +    +S   V Y  +I   C EG++H
Sbjct: 562 HLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLH 621

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
           +A   + +MV  G   ++      F C  L + F  + ++ E  L+
Sbjct: 622 EACNLYFEMVNNGMNPNV------FICSALMSCFYKEGKVDEANLV 661



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/435 (23%), Positives = 193/435 (44%), Gaps = 32/435 (7%)

Query: 243 VLLSSMCKSGRIDEALGL-LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC- 300
            LL +  +  R+D    L L+ +     +P LV+++ L+  L +  + H A  L + +  
Sbjct: 71  ALLQAALRRVRLDPDAALHLFRLAPS--RPSLVSHAQLLHILARARRFHDARALLSSLPP 128

Query: 301 -SKRISPN------SFAHGAILLGL-----CEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
            ++ + P+       F   A+   L      +   ++ A   FD +    C   +   N 
Sbjct: 129 HAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNR 188

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +++  V+ G+ G A  +Y Q+    + P   T   +   +C++G+VA A   ++ ++  G
Sbjct: 189 LLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           LE + V Y   M+ YC  G  +    +L+ ++ K + P  VTYT+++KG CK  +++EA 
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308

Query: 469 QLLEDMYVIG-VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           +++++M   G +  D++ Y  +I  +C+   +  A ++ N+M    +      YN +I+G
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC  G ++    +L  +++  +   K +Y T+I  +C EG + KA      MV  G   +
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428

Query: 588 IRDYTKSF--FC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
              Y      FC             +ML  G  P++  C  +L    + G       L  
Sbjct: 429 TLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWK 488

Query: 633 VMIKSGLLPDKFLIN 647
             +  GL  +    N
Sbjct: 489 ETLARGLAKNVITFN 503


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 157/598 (26%), Positives = 289/598 (48%), Gaps = 22/598 (3%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E P +VY  + +I  LC++ R  DA   L+   G      V + N +++ YC+ G  + A
Sbjct: 66  EAP-DVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAA 124

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   M    + PDA++Y  LI GLC  G + +AL   +DM R   +P  +TY++L + 
Sbjct: 125 RRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEA 181

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
               S    A KV+ ++  KG  P+IVTY V+I G C+   V++  ++   + S GF+ +
Sbjct: 182 VCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPD 241

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            ++Y+ +L  +C + R ++   L  EM      P+ VT+ +L+R  C+   V +AI++ +
Sbjct: 242 TVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLD 301

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            M     + N+     ++  +C++  + +A  + +++    C  D + Y  ++ G  + G
Sbjct: 302 RMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAG 361

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
              +A +L  +++ K   P+ VTFN+ I   C+ G +  A  L++ +  +G     VTY 
Sbjct: 362 RWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYN 421

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N +C +G +   L L   +  +   P  +TYT ++ GLC   +L  A +LL +M   
Sbjct: 422 ALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMMQN 478

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
               + +T+N ++  FC+   + +A +L+ QM  H   P   T+N L+DG+  + + + A
Sbjct: 479 DCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEA 538

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---- 593
             LL  L    ISL  + Y++I+     E  + +A+  F  + + G       Y K    
Sbjct: 539 LELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSA 598

Query: 594 -----------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                       FF  M+SN   P++    +++    + G L     + + +   G+L
Sbjct: 599 LCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVL 656



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 149/573 (26%), Positives = 275/573 (47%), Gaps = 40/573 (6%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           R G   DA  V+   +     V +  YN+L+        +      I     P + YT +
Sbjct: 82  RRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYT 141

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL-GFAEVAKGLFCLMLK 126
            +I GLC + R+ DA+  L +   +E  PSVV+   ++   CK  GF +  K L  +  K
Sbjct: 142 PLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAK 201

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  P+  +YN++I+G+C    +++A +  N +  +G +PD ++Y+ + KG     +   
Sbjct: 202 -GCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 260

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
              +  +++     P+ VT+ +L+  +C+ G VE  +++ + M   G   N    +++++
Sbjct: 261 VEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVIN 320

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           S+CK GR+D+A   L  M + G  PD ++Y+ +++GLC+  +   A +L NEM  K   P
Sbjct: 321 SICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPP 380

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N       +  LC+K +I +A +  + +    C   +V YN +++G+   G +  A++L+
Sbjct: 381 NEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELF 440

Query: 367 RQLIEKRISPSIVTFNSLIYG-----------------------------------FCKN 391
             L      P+ +T+ +L+ G                                   FC+ 
Sbjct: 441 NSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQK 497

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G V +A  L+  +  HG  P+ +T+ T ++   E+ N +  L LL  + +K I    +TY
Sbjct: 498 GFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITY 557

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           + ++  L ++ +++EAVQ+   +  +G+ P  + YN I+ + CK  +  +A      M  
Sbjct: 558 SSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVS 617

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           ++  P  +TY ILI+GL   G LK A  +L  L
Sbjct: 618 NSCMPNESTYVILIEGLAREGLLKEARYVLSEL 650



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 229/456 (50%), Gaps = 6/456 (1%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  PD +    LI  LC  G   +A          G   D   Y+ L  G+    ++  A
Sbjct: 65  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAA 124

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++I  + +    PD  TYT LI G C  G V + L L + ML +  + +V+ Y+VLL +
Sbjct: 125 RRLIASMPVP---PDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEA 181

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CKS    +A+ +L EM A G  P++VTY+++I G+C++D+V  A Q+ N + S    P+
Sbjct: 182 VCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPD 241

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           + ++  +L GLC  +   +  + F  ++ +NC+ + V +++++  + + G +  A+++  
Sbjct: 242 TVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLD 301

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++ E   + +    N +I   CK G+V DA   L+ +  +G  P  ++YTT +   C  G
Sbjct: 302 RMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAG 361

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
             +    LL EM  K   P  VT+   I  LC++  + +A+ L+E M   G +   +TYN
Sbjct: 362 RWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYN 421

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++  FC    +  A +L N +     EP + TY  L+ GLC    L  A  LL  + ++
Sbjct: 422 ALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQN 478

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +  L  V +  ++   C +G V +A+    QM+E G
Sbjct: 479 DCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHG 514



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 241/508 (47%), Gaps = 41/508 (8%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPRNVYTN 66
           G V DA+ ++  M   + + S+ TY  LL  +  +        + D+++      N+ T 
Sbjct: 151 GRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTY 210

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +++I+G+C++ R+ DA   L   +   F P  VS   ++   C     E  + LFC M++
Sbjct: 211 NVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVE 270

Query: 127 YGLHPDAFSY-----------------------------------NILIHGLCIAGSMEE 151
               P+  ++                                   NI+I+ +C  G +++
Sbjct: 271 NNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDD 330

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A EF N+MG +G  PD I+Y+ + KG     +   A +++ +++ K   P+ VT+   IC
Sbjct: 331 AFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFIC 390

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
             CQ G +++ + L E M   G  + ++ Y+ L++  C  GR+D AL L     ++  +P
Sbjct: 391 ILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELF---NSLPCEP 447

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           + +TY+ L+ GLC  +++  A +L  EM       N      ++   C+K  + EA    
Sbjct: 448 NTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELV 507

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             ++   C  +++ +N ++DG  +  N  EA++L   L+ K IS   +T++S++    + 
Sbjct: 508 QQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSRE 567

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
            ++ +A ++   ++  G+ P AV Y   ++A C+     R +     M + +  P   TY
Sbjct: 568 DRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTY 627

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
            ++I+GL ++  L+EA  +L ++   GV
Sbjct: 628 VILIEGLAREGLLKEARYVLSELCSRGV 655



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 215/476 (45%), Gaps = 15/476 (3%)

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           ++ A +++++   +G  PD+   T LI   C+ G   +  ++       G  ++V AY+ 
Sbjct: 51  LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++  C+ GR+D A  L+  M    + PD  TY+ LIRGLC + +V  A+ L ++M  + 
Sbjct: 111 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+   +  +L  +C+     +A    D +    C  ++V YN++I+G  +   + +A 
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDAR 227

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           Q+  +L      P  V++ +++ G C   +  D   L   +  +   P+ VT+   +  +
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFF 287

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C  G ++R + +L  M             +VI  +CKQ ++ +A + L +M   G +PD 
Sbjct: 288 CRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDT 347

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           I+Y T+++  C+      A +LLN+M   N  P   T+N  I  LC  G +  A  L+  
Sbjct: 348 ISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQ 407

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR------------DY 591
           + E+  S+  V Y  ++   C +G V  A+  F  +  +   I+              D 
Sbjct: 408 MPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLCHAERLDA 467

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                  M+ N  P +     V++  F Q G +    EL   M++ G  P+    N
Sbjct: 468 AAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFN 523



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 191/375 (50%), Gaps = 6/375 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           ML   + R GMV  A+ V+ +M E     +    N ++ ++      D  ++  +++   
Sbjct: 282 MLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSY 341

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +  + + V+ GLC+  R +DA   L E   K   P+ V+ N  +   C+ G  + A
Sbjct: 342 GCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQA 401

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M +YG      +YN L++G C+ G ++ ALE  N +     EP+ ITY+ L  G
Sbjct: 402 ILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTG 458

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A +++ +++      ++VT+ VL+  +CQ G VEE ++L + M+  G   N
Sbjct: 459 LCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPN 518

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +I ++ LL  + +    +EAL LL+ + + G+  D +TYS ++  L ++D++ +A+Q+++
Sbjct: 519 LITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFH 578

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            +    + P +  +  IL  LC++     A  +F  ++ ++C+ +   Y I+I+G  + G
Sbjct: 579 AVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREG 638

Query: 358 NIGEAVQLYRQLIEK 372
            + EA  +  +L  +
Sbjct: 639 LLKEARYVLSELCSR 653



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 145/316 (45%), Gaps = 3/316 (0%)

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           S  +R L  +D + +A +L     S+  +P+ +    ++  LC +   ++A     +   
Sbjct: 39  SSRLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEG 98

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           S    DV  YN ++ GY + G +  A +L   +    + P   T+  LI G C  G+V D
Sbjct: 99  SGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGD 155

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  LLD +     +PS VTYT  + A C+     + + +L EM  K   P  VTY V+I 
Sbjct: 156 ALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIIN 215

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           G+C++ ++ +A Q+L  +   G  PD ++Y T+++  C  K       L  +M  +N  P
Sbjct: 216 GMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVP 275

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              T+++L+   C  G ++ A  +L  + EH  +        +I + C +G V  A  F 
Sbjct: 276 NEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFL 335

Query: 577 CQMVEKGFEISIRDYT 592
             M   G       YT
Sbjct: 336 NNMGSYGCSPDTISYT 351


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 162/539 (30%), Positives = 272/539 (50%), Gaps = 11/539 (2%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKE----FGPSVVSLNAIMSRYCKLGFAEV 116
           R+  + + V+  LC+Q  L DA LFL      E      P+ +S   +M   C    A  
Sbjct: 54  RDAVSYNTVLAALCRQGCL-DAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQ 112

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A GL   M   G+ PD  +Y  LI GLC A  ++ A+E  N+M   G+EP+ + YS L  
Sbjct: 113 AVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLH 172

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+    +     KV +++  +G +PD+V YT LI   C+ G V++  ++ ++M  +G + 
Sbjct: 173 GYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEP 232

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NV+ Y+VL++SMCK G + EAL L   M   G++PD+VTY+ LI GL    ++ +A+ L 
Sbjct: 233 NVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALL 292

Query: 297 NEMC--SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
            EM     R+ P+     +++ GLC+   + +A      +  + C  ++V +N++I G +
Sbjct: 293 EEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLL 352

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           ++  + +A++L  ++    + P   T++ LI GFCK  +V  A   L  ++  G+EP  V
Sbjct: 353 RVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPV 412

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            Y   + A C++G + +   L  EM+ +        Y+ +I G  K  + + A + L+DM
Sbjct: 413 HYIPLLKAMCDQGMMGQARDLFNEMD-RNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDM 471

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+ PD +TY+  I  F K  DL  A ++L QM      P  A ++ LI G    GD 
Sbjct: 472 IDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDT 531

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK---AMTFFCQMVEKGFEISIRD 590
           +    L   +   +++L     +TI+ +  A  +  K   ++  F   + KG  IS  D
Sbjct: 532 EKILELTREMTAKDVALDPKIISTIVTSLGASIEGQKLLQSLPGFDTEISKGDVISPHD 590



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 227/461 (49%), Gaps = 21/461 (4%)

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQ---GFKLNVIAYSVLLSSMCKSGRIDEAL 258
           D V+Y  ++   C+ G ++  L L  VM  +     + N I+Y+ L+ ++C   R  +A+
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
           GLL  M+  G++PD+VTY  LIRGLC    V  A++L NEMC   I PN   +  +L G 
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C+          F+ +       DVV+Y  +ID   + G + +A ++   + E+ + P++
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VT+N LI   CK G V +A  L   +   G++P  VTY T +        +   +ALL+E
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 439 M---ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           M   ET+ + P  +T+  VI GLCK   +++A+Q+   M   G   + + +N +I    +
Sbjct: 295 MMQGETR-VRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLR 353

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              ++KA +L+++M    L+P S TY+ILI+G C    ++ A+  L  ++   +    V 
Sbjct: 354 VHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVH 413

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQM--------------VEKGFEISIRDYTKSFFCMMLS 601
           Y  ++KA C +G + +A   F +M              +   F+   +   + F   M+ 
Sbjct: 414 YIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMID 473

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            G  PD     + +  F + GDL +   +   M  SG +PD
Sbjct: 474 EGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPD 514



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 244/462 (52%), Gaps = 6/462 (1%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           AV ++  M++  ++  + TY +L+  L      D   +L +++  S    NV   S ++ 
Sbjct: 113 AVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLH 172

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           G C+  R +      +E +G+   P VV   A++   C+ G  + A  +  +M + GL P
Sbjct: 173 GYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEP 232

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           +  +YN+LI+ +C  GS+ EAL+   +M   GV+PD +TY+ L  G   + ++  A  ++
Sbjct: 233 NVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALL 292

Query: 192 QKLLIKGS--DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           ++++   +   PD++T+  +I G C+IG + + L++R +M   G + N++A+++L+  + 
Sbjct: 293 EEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLL 352

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           +  ++ +A+ L+ EM + GL+PD  TYSILI G CK  +V +A    +EM  + + P   
Sbjct: 353 RVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPV 412

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            +  +L  +C++ M+ +AR  F+ +   NC  D   Y+ MI G  K G    A +  + +
Sbjct: 413 HYIPLLKAMCDQGMMGQARDLFNEMD-RNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDM 471

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           I++ + P  VT++  I  F K+G +A A R+L  +   G  P    + + +  Y  +G+ 
Sbjct: 472 IDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDT 531

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           +++L L +EM  K +       + ++  L    + Q+ +Q L
Sbjct: 532 EKILELTREMTAKDVALDPKIISTIVTSLGASIEGQKLLQSL 573



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 18/217 (8%)

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMY---VIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           V+Y  V+  LC+Q  L  A+ LL  M     +   P+ I+Y T++R+ C  +   +A  L
Sbjct: 57  VSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGL 116

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           L  M    + P   TY  LI GLC   D+  A  LL  + E  I    V Y+ ++  +C 
Sbjct: 117 LRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCK 176

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MMLSNGFPPDQEI 610
            G        F +M  +G E  +  YT      C             MM   G  P+   
Sbjct: 177 TGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVT 236

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             V++ +  + G +    +L   M + G+ PD    N
Sbjct: 237 YNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYN 273


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 247/459 (53%), Gaps = 11/459 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +  T   +++G+C+      A+  L++    +   +VV  +AI+ R CK G    A+ +F
Sbjct: 44  DAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIF 103

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+ P+  +YN +I G C  G   +A +   DM    ++PD +T+S L   F   
Sbjct: 104 TEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKE 163

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++SGA ++ +++L +   P  +TY+ +I G+C+   +E+   + ++M+S+G   ++I  
Sbjct: 164 GKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITL 223

Query: 242 SVLLSSMCKS-----------GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           + L+   C++           G ++ A  L  EM + G+ PD+VT + L+ GLC+  K+ 
Sbjct: 224 NTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLE 283

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           KA++++      ++  ++     I+ G+C+   + EA   F+SL ++    DVV YNI+I
Sbjct: 284 KALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILI 343

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
             +VK GN   A  +Y +++ K I PS VT+NS++ GFCK  ++ +AR+++D++   G  
Sbjct: 344 GVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCS 403

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P  VT++T +  YC+ G +   L L  EM  + +    +TY  +I G CK   L  A  +
Sbjct: 404 PDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDI 463

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            E+M   GV PD IT+ +++   C   +L+K   +L  +
Sbjct: 464 FEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDL 502



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/499 (27%), Positives = 243/499 (48%), Gaps = 46/499 (9%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M++ G   +  ++  L++GLC  G + +AL   + M   G +PDA+TY  +  G   L  
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A  +++K+       ++V Y+ ++   C+ GN  +   +   M  +G   NV+ Y+ 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++   C  G+  +A  LL +M    + PD+VT+S LI    K+ KV  A +LY EM  + 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG----------- 352
           I P +  + +++ G C+   + +A+  FD ++   C  D++  N +IDG           
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK------------------- 393
           + ++GN+  A  L++++I   +SP IVT N+L+ G C+NGK                   
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 394 ----------------VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
                           V +A  L +++ ++G+E   VTY   +  + +EGN  R   +  
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM  K I P+ VTY  ++ G CKQ +L+EA Q+++ M   G +PD +T++T+I+ +CK  
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            +    +L ++M    L   + TYN LI G C  GDL  A  +   +    +    + + 
Sbjct: 421 RVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFR 480

Query: 558 TIIKAHCAEGDVHKAMTFF 576
           +++   C + ++ K +T  
Sbjct: 481 SMLAGLCTKAELQKGLTML 499



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 242/498 (48%), Gaps = 11/498 (2%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P NV T + +++GLC++ R+  A+  +     +   P  V+   I++  CKLG    A  
Sbjct: 7   PANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALN 66

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   M +  +  +   Y+ ++  LC  G+  +A     +M   G+ P+ +TY+ +  G+ 
Sbjct: 67  MLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYC 126

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              + S A ++++ ++ +  DPD+VT++ LI  + + G V    +L   ML +      I
Sbjct: 127 SYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTI 186

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK----------- 288
            YS ++   CK  R+++A  +   M + G  PD++T + LI G C+  +           
Sbjct: 187 TYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGN 246

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V+ A  L+ EM S  +SP+      +L GLCE   + +A   F     S    D    NI
Sbjct: 247 VNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNI 306

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I+G  K   + EA  L+  L    +   +VT+N LI  F K G    A  +   +   G
Sbjct: 307 IINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKG 366

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + PS VTY + ++ +C++  ++    ++  M ++   P  VT++ +IKG CK  ++ + +
Sbjct: 367 IIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGL 426

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +L  +M   G+  D ITYN +I  FCK  DL  A  +  +M    + P + T+  ++ GL
Sbjct: 427 ELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGL 486

Query: 529 CVNGDLKNADCLLVSLQE 546
           C   +L+    +L  LQ+
Sbjct: 487 CTKAELQKGLTMLEDLQK 504



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 233/495 (47%), Gaps = 31/495 (6%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M   G   + +T++ L  G     ++  A  ++ +++ +G  PD VTY  ++ G C++G+
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
               L +   M     K NV+ YS ++  +CK G   +A  +  EM   G+ P+++TY+ 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           +I G C   K   A QL  +M  + I P+     A++    ++  ++ A   +  ++  N
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS-----------LIYG 387
                + Y+ MIDG+ K   + +A  ++  ++ K  SP I+T N+           LI+G
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           FC+ G V  A+ L   +  +G+ P  VT  T +   CE G +++ L + +  +   +   
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             T  ++I G+CK  K+ EA  L   + V GV  D +TYN +I  F K  +  +A  +  
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M    + P++ TYN ++DG C    L+ A  ++ S+     S   V ++T+IK +C  G
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
            V   +  F +M ++G       Y        L +GF      C+V        GDL   
Sbjct: 421 RVDDGLELFSEMCQRGLVADTITYNA------LIHGF------CKV--------GDLNGA 460

Query: 628 FELAAVMIKSGLLPD 642
            ++   M+ SG+ PD
Sbjct: 461 QDIFEEMVSSGVCPD 475



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 233/441 (52%), Gaps = 16/441 (3%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           A+ ++ KM E  +K ++  Y++++  L     H     +++ ++       NV T + +I
Sbjct: 64  ALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQ-NIFTEMHEKGIFPNVLTYNCMI 122

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           DG C   +  DA   L++   +   P VV+ +A+++ + K G    A+ L+  ML+  + 
Sbjct: 123 DGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIF 182

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL------AK-----GFH 179
           P   +Y+ +I G C    +E+A    + M   G  PD IT + L      AK     GF 
Sbjct: 183 PTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFC 242

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
            +  ++ A  + Q+++  G  PDIVT   L+ G C+ G +E+ L++ +V       L+  
Sbjct: 243 QVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTA 302

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
             +++++ MCK  ++DEA  L   +   G++ D+VTY+ILI    K+    +A  +Y EM
Sbjct: 303 TCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEM 362

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K I P++  + +++ G C++  + EAR   DS++   C  DVV ++ +I GY K G +
Sbjct: 363 LCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRV 422

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            + ++L+ ++ ++ +    +T+N+LI+GFCK G +  A+ + + +   G+ P  +T+ + 
Sbjct: 423 DDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSM 482

Query: 420 MNAYCEEGNIQRLLALLQEME 440
           +   C +  +Q+ L +L++++
Sbjct: 483 LAGLCTKAELQKGLTMLEDLQ 503



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 208/445 (46%), Gaps = 26/445 (5%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M+  G   NV+ ++ L++ +C+ GR+ +AL L+  M   G +PD VTY  ++ G+CK   
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
              A+ +  +M   +I  N   + AI+  LC+     +A+  F  +       +V+ YN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           MIDGY   G   +A QL R +IE+ I P +VTF++LI  F K GKV+ A  L   +    
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK----- 463
           + P+ +TY++ ++ +C+   ++    +   M +K   P  +T   +I G C+  +     
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 464 ------LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
                 +  A  L ++M   GV+PD +T NT++   C+   L KA ++        ++  
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
           +AT NI+I+G+C    +  A  L  SL  + +    V Y  +I     EG+  +A   + 
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 578 QMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEVMLIAFHQGG 622
           +M+ KG   S   Y      FC              M+S G  PD      ++  + + G
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420

Query: 623 DLGSVFELAAVMIKSGLLPDKFLIN 647
            +    EL + M + GL+ D    N
Sbjct: 421 RVDDGLELFSEMCQRGLVADTITYN 445


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 269/529 (50%), Gaps = 2/529 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   + VIDG  ++  +  A    +E   +   P +V+ N+++   CK    + A+   
Sbjct: 221 NVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFL 280

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+   + P+ ++YN LI+G    G  +EA+    +M RH + PD +T S+L       
Sbjct: 281 RQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKY 340

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  V   + +KG +PD+ +Y +++ GY   G + +   L ++ML  G   +   +
Sbjct: 341 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 400

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+ +    G +D+A+ +  EM   G+KPD+VTY  +I  LC+  K+  A++ +N+M  
Sbjct: 401 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 460

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIG 360
           + ++P+ +A+  ++ G C    + +A+    S IM+N +  D+V ++ +I+   KLG + 
Sbjct: 461 QGVAPDKYAYNCLIQGFCTHGSLLKAKELI-SEIMNNGMHLDIVFFSSIINNLCKLGRVM 519

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  ++   +   + P  V +N L+ G+C  GK+  A R+ D +   G+EP+ V Y T +
Sbjct: 520 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 579

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YC+ G I   L+L +EM  + I P+ + Y+++I GL +  +   A     +M   G+ 
Sbjct: 580 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIA 639

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            D  TYN ++R   K +   +A  L  ++   N++    T N +IDG+     ++ A  L
Sbjct: 640 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 699

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             S+    +  + V Y+ +I     EG V +A   F  M   G E + R
Sbjct: 700 FASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 748



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 254/518 (49%), Gaps = 16/518 (3%)

Query: 82  AILFLQETAGKEFGPSVVSLN----AIMSRYC-KLGFAEVAKGLFCLMLKYGLHPDAFSY 136
           A+      A +  GP V+S      AI+   C +    E+A   F  +L+ GL  +    
Sbjct: 93  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 152

Query: 137 NILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           N L+ G C A   +EAL+   +     G  PD  +YSIL K      + SG    + +++
Sbjct: 153 NHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGK-SGQADDLLRMM 211

Query: 196 IKGS---DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
            +G     P++V Y  +I G+ + G+V +   L + M+ +G   +++ Y+ ++ ++CK+ 
Sbjct: 212 AEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKAR 271

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            +D+A   L +M    + P+  TY+ LI G     +  +A++++ EM    I P+     
Sbjct: 272 AMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 331

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC+   I EAR  FD++ M     DV  YNIM++GY   G + +   L+  ++  
Sbjct: 332 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 391

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            I+P   TFN LI  +   G +  A  + + ++ HG++P  VTY T + A C  G +   
Sbjct: 392 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 451

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           +    +M  + + P    Y  +I+G C    L +A +L+ ++   G+  D + +++II +
Sbjct: 452 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 511

Query: 493 FCK---CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
            CK     D +  F L   + LH   P +  YN+L+DG C+ G ++ A  +  ++    I
Sbjct: 512 LCKLGRVMDAQNIFDLTVNVGLH---PDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 568

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
               V Y T++  +C  G + + ++ F +M+++G + S
Sbjct: 569 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPS 606



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 247/498 (49%), Gaps = 5/498 (1%)

Query: 33  TYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
           TYN+L+Y    T   W     ++ +++      +V T S+++  LC+  ++++A      
Sbjct: 294 TYNNLIYGYSSTG-QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDT 352

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
            A K   P V S N +++ Y   G       LF LML  G+ PD +++N+LI      G 
Sbjct: 353 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 412

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +++A+   N+M  HGV+PD +TY  +      + ++  A +   +++ +G  PD   Y  
Sbjct: 413 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 472

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI G+C  G++ +  +L   +++ G  L+++ +S +++++CK GR+ +A  +      VG
Sbjct: 473 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 532

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           L PD V Y++L+ G C   K+ KA+++++ M S  I PN   +G ++ G C+   I E  
Sbjct: 533 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 592

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             F  ++        +LY+I+IDG  + G    A   + ++ E  I+  I T+N ++ G 
Sbjct: 593 SLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGL 652

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            KN    +A  L   ++   ++ + +T  T ++   +   ++    L   +    + P+ 
Sbjct: 653 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSV 712

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VTY+++I  L K+  ++EA  +   M   G  P+    N ++R   K  ++ +A   L++
Sbjct: 713 VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSK 772

Query: 509 MWLHNLEPTSATYNILID 526
           +   N      T  +L+D
Sbjct: 773 IDERNFSLEHLTAMLLVD 790



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 137/584 (23%), Positives = 272/584 (46%), Gaps = 38/584 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + + G V+ A  +  +M +  +   + TYNS+++ L   R  D        +       N
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 291

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T + +I G     + ++A+   +E       P VV+L+ +M   CK G  + A+ +F 
Sbjct: 292 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 351

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G +PD FSYNI+++G    G + +  +  + M   G+ PD  T+++L K +    
Sbjct: 352 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 411

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A  +  ++   G  PD+VTY  +I   C+IG +++ ++    M+ QG   +  AY+
Sbjct: 412 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 471

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C  G + +A  L+ E+   G+  D+V +S +I  LCK  +V  A  +++   + 
Sbjct: 472 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 531

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P++  +  ++ G C    + +A   FD+++ +    +VV Y  +++GY K+G I E 
Sbjct: 532 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 591

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + L+R+++++ I PS + ++ +I G  + G+   A+     +K H               
Sbjct: 592 LSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAK-----MKFH--------------- 631

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
                          EM    I     TY +V++GL K     EA+ L +++  + V  +
Sbjct: 632 ---------------EMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 676

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            IT NT+I    + + + +A  L   +    L P+  TY+I+I  L   G ++ A+ +  
Sbjct: 677 IITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFS 736

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           S+Q             +++    + ++ +A  +  ++ E+ F +
Sbjct: 737 SMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSL 780



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 232/469 (49%), Gaps = 3/469 (0%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSE 58
           L + YS TG   +AV V  +M+   +   + T + L+ +L ++  I    D++D + +  
Sbjct: 298 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 357

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +V++ +I+++G   +  L D         G    P   + N ++  Y   G  + A 
Sbjct: 358 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 417

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M  +G+ PD  +Y  +I  LC  G M++A+E  N M   GV PD   Y+ L +GF
Sbjct: 418 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 477

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +  A ++I +++  G   DIV ++ +I   C++G V +   + ++ ++ G   + 
Sbjct: 478 CTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 537

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y++L+   C  G++++AL +   M + G++P++V Y  L+ G CK  ++ + + L+ E
Sbjct: 538 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 597

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  + I P++  +  I+ GL E      A+M F  +  S    D+  YNI++ G  K   
Sbjct: 598 MLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRC 657

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             EA+ L+++L    +  +I+T N++I G  +  +V +A+ L  +I    L PS VTY+ 
Sbjct: 658 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSI 717

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
            +    +EG ++    +   M+     P       V++ L K+ ++  A
Sbjct: 718 MITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 766



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 209/429 (48%)

Query: 47  MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMS 106
           M DL+D +       + YT +++I        L  A++   E       P VV+   +++
Sbjct: 381 MTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA 440

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
             C++G  + A   F  M+  G+ PD ++YN LI G C  GS+ +A E  +++  +G+  
Sbjct: 441 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHL 500

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           D + +S +      L ++  A  +    +  G  PD V Y +L+ GYC +G +E+ L++ 
Sbjct: 501 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 560

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           + M+S G + NV+ Y  L++  CK GRIDE L L  EM   G+KP  + YSI+I GL + 
Sbjct: 561 DAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEA 620

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            +   A   ++EM    I+ +   +  +L GL +     EA   F  L   N   +++  
Sbjct: 621 GRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 680

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N MIDG  +   + EA  L+  +   R+ PS+VT++ +I    K G V +A  +  +++ 
Sbjct: 681 NTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 740

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G EP++      +    ++  I R  A L +++ +     H+T  +++     +   +E
Sbjct: 741 AGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 800

Query: 467 AVQLLEDMY 475
            ++ L   Y
Sbjct: 801 QIRFLPAKY 809



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 214/460 (46%), Gaps = 18/460 (3%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG- 259
           P   TY +L+    +    E  L     +L  G ++N+I  + LL   C++ R DEAL  
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI--SPNSFAHGAILLG 317
           LL+    +G  PD+ +YSIL++ LC Q K  +A  L   M       SPN  A+  ++ G
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 231

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
             ++  + +A   F  ++      D+V YN ++    K   + +A    RQ++ KR+ P+
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 291

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
             T+N+LIYG+   G+  +A R+   ++ H + P  VT +  M + C+ G I+    +  
Sbjct: 292 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 351

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            M  K   P   +Y +++ G   +  L +   L + M   G+ PD  T+N +I+++  C 
Sbjct: 352 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 411

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            L KA  + N+M  H ++P   TY  +I  LC  G + +A      + +  ++  K AY 
Sbjct: 412 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 471

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSN 602
            +I+  C  G + KA     +++  G  + I  ++               ++ F + ++ 
Sbjct: 472 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 531

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           G  PD  +  +++  +   G +     +   M+ +G+ P+
Sbjct: 532 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 571



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 193/402 (48%), Gaps = 7/402 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETP 60
            Y+  GM+  A+ +  +M++  +K  + TY +++  L    +  D M      I     P
Sbjct: 406 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 465

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            + Y  + +I G C    L  A   + E         +V  ++I++  CKLG    A+ +
Sbjct: 466 -DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 524

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F L +  GLHPDA  YN+L+ G C+ G ME+AL   + M   G+EP+ + Y  L  G+  
Sbjct: 525 FDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCK 584

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN-VEEGLKLREVMLSQGFKLNVI 239
           + +I     + +++L +G  P  + Y+++I G  + G  V   +K  E M   G  +++ 
Sbjct: 585 IGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHE-MTESGIAMDIC 643

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+++L  + K+   DEA+ L  E+ A+ +K +++T + +I G+ +  +V +A  L+  +
Sbjct: 644 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI 703

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
              R+ P+   +  ++  L ++ ++ EA   F S+  + C  +  L N ++   +K   I
Sbjct: 704 SRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEI 763

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
             A     ++ E+  S   +T   L+  F   G   +  R L
Sbjct: 764 VRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 172/385 (44%), Gaps = 29/385 (7%)

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           L P   TY+IL+    +  +   A+  + ++    +  N      +L G CE +   EA 
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA- 168

Query: 329 MYFDSLIMSN----CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI--SPSIVTFN 382
              D L+       C+ DV  Y+I++      G  G+A  L R + E     SP++V +N
Sbjct: 169 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 226

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           ++I GF K G V  A  L   +   G+ P  VTY + ++A C+   + +  A L++M  K
Sbjct: 227 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 286

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P + TY  +I G     + +EAV++ ++M    + PD +T + ++ S CK   +++A
Sbjct: 287 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 346

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
             + + M +    P   +YNI+++G    G L +   L   +    I+     +  +IKA
Sbjct: 347 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 406

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           +   G + KAM  F +M         RD+           G  PD      ++ A  + G
Sbjct: 407 YANCGMLDKAMIIFNEM---------RDH-----------GVKPDVVTYRTVIAALCRIG 446

Query: 623 DLGSVFELAAVMIKSGLLPDKFLIN 647
            +    E    MI  G+ PDK+  N
Sbjct: 447 KMDDAMEKFNQMIDQGVAPDKYAYN 471



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 95/237 (40%), Gaps = 31/237 (13%)

Query: 433 LALLQEMETKAIGP-----THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           +AL     ++A GP     T  TY +++    +  + + A+     +   G+  + I  N
Sbjct: 94  VALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIAN 153

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLE-----PTSATYNILIDGLCVNGDLKNADCLLV 542
            ++  FC+ K   +A  +L    LH        P   +Y+IL+  LC  G    AD LL 
Sbjct: 154 HLLEGFCEAKRTDEALDIL----LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 209

Query: 543 SLQEHNI--SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
            + E     S   VAY T+I     EGDV+KA   F +MV++G    +  Y         
Sbjct: 210 MMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK 269

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                  ++F   M++    P+      ++  +   G       +   M +  +LPD
Sbjct: 270 ARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 326


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 166/629 (26%), Positives = 305/629 (48%), Gaps = 46/629 (7%)

Query: 17  FVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETPRNVYTNSIV 69
            V+ +M +L    ++ +YN LL  L          +++  + DD    + P +V + + V
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD--GGDCPPDVVSYTTV 205

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           I+G  ++  L  A     E   +   P+VV+ ++I++  CK    + A  +   M+K G+
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P+  +YN ++HG C +G  +EA+ F   M   GVEPD +TY+ L        + + A K
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           +   +  +G  P+I TY  L+ GY   G + E   L ++M+  G   N   +S+L+ +  
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K G++D+A+ +  +M   GL PD VTY  +I  LCK  +V  A++ + +M  +R+SP + 
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            + +++  LC  +   +A+     ++      D + +N +ID + K G + E+ +L+  +
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           +   + P I+T+++LI G+C  GK+ +A +LL ++   G++P  VTY T +N YC+   +
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           +  L L +EME+  + P  +TY ++++GL +  +   A +L   +   G   +  TYN I
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV------- 542
           +   CK     +A ++   + L +L+  + T+NI+I  L   G    A  L         
Sbjct: 626 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGL 685

Query: 543 ----------------------------SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
                                       S++E+  +       +I++     GD+ +A T
Sbjct: 686 VPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGT 745

Query: 575 FFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           +   + EK F  S+   T S F  +LS G
Sbjct: 746 YLFMIDEKHF--SLEASTASLFLDLLSGG 772



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 164/643 (25%), Positives = 284/643 (44%), Gaps = 53/643 (8%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E   N+ T  I+I   C   RL      L     K F    ++   ++   C       A
Sbjct: 86  EVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 145

Query: 118 KGLFCL-MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE--PDAITYSIL 174
             +    M + G  P+ FSYNIL+ GLC     +EALE    M   G +  PD ++Y+ +
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             GF     +  A+    ++L +G  P++VTY+ +I   C+   +++ +++   M+  G 
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             N   Y+ ++   C SG+  EA+G L +M + G++PD+VTY+ L+  LCK  +  +A +
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           +++ M  + + P    +G +L G   K  + E     D ++ +    +  +++I+I  Y 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K G + +A+ ++ ++ ++ ++P  VT+ ++I   CK+G+V DA R  + +    L P  +
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 415 TY-------------------------------TTFMNA----YCEEGNIQRLLALLQEM 439
            Y                               T F N+    +C+EG +     L   M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
               + P  +TY+ +I G C   K+ EA +LL  M  +G+ PD +TYNT+I  +CK   +
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
             A  L  +M    + P   TYNI++ GL        A  L V + E    L    Y  I
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 560 IKAHCAEGDVHKAMTFF-------CQMVEKGFEISI--------RDYTKSFFCMMLSNGF 604
           +   C      +A+  F        Q+  + F I I         D  K  F  + +NG 
Sbjct: 626 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGL 685

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            PD     +M     + G L  + +L   M ++G   +  ++N
Sbjct: 686 VPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/580 (25%), Positives = 269/580 (46%), Gaps = 22/580 (3%)

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG---LHPDAFSY 136
           +DA     E   +  G S+  LN  ++   +   A  A   +  M + G   + P+  +Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGADEVTPNLCTY 94

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
            ILI   C AG ++       ++ + G   DAI ++ L KG     + S A  ++ + + 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 197 K-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--NVIAYSVLLSSMCKSGR 253
           + G  P++ +Y +L+ G C     +E L+L ++M   G     +V++Y+ +++   K G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +D+A G  +EM   G+ P++VTYS +I  LCK   + KA+++   M    + PN   + +
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           I+ G C      EA  +   +       DVV YN ++D   K G   EA +++  + ++ 
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           + P I T+ +L+ G+   G + +   LLD +  +G+ P+   ++  + AY ++G + + +
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            +  +M  + + P  VTY  VI  LCK  ++++A++  E M    ++P  I YN++I S 
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C      KA +L+ +M    +   +  +N +ID  C  G +  ++ L   +    +    
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTK--------SFFCM 598
           + Y+T+I  +C  G + +A      MV  G       +   I  Y K          F  
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
           M S+G  PD     ++L    Q     +  EL   + +SG
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG 614



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 182/379 (48%), Gaps = 5/379 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y++ G V  A+ V +KM++  L     TY +++  L    R  D M      I  
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
             +P N+  NS+ I  LC   +   A   + E   +      +  N+I+  +CK G    
Sbjct: 439 RLSPGNIVYNSL-IHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           ++ LF LM++ G+ PD  +Y+ LI G C+AG M+EA +    M   G++PD +TY+ L  
Sbjct: 498 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+  +S++  A  + +++   G  PDI+TY +++ G  Q        +L   +   G +L
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +  Y+++L  +CK+   DEAL +   +    L+ +  T++I+I  L K  +  +A  L+
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             + +  + P+   +  +   L E+ ++ E    F S+  + C  +  + N ++   ++ 
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737

Query: 357 GNIGEAVQLYRQLIEKRIS 375
           G+I  A      + EK  S
Sbjct: 738 GDITRAGTYLFMIDEKHFS 756


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 164/565 (29%), Positives = 275/565 (48%), Gaps = 25/565 (4%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L++AI    +       P   S N ++ R+ KLG  +  K  F  M+  G  P  F+YNI
Sbjct: 76  LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 135

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           +I  +C  G +E A     +M   G+ PD +TY+ +  GF  + ++       +++    
Sbjct: 136 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 195

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
            +PD++TY  LI  +C+ G +  GL+    M   G K NV++YS L+ + CK G + +A+
Sbjct: 196 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 255

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
               +M  VGL P+  TY+ LI   CK   +  A +L NEM    +  N   + A++ GL
Sbjct: 256 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 315

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C+ E + EA   F  +  +  I ++  YN +I G+VK  N+  A++L  +L  + I P +
Sbjct: 316 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 375

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           + + + I+G C   K+  A+ +++ +K  G++ +++ YTT M+AY + GN    L LL E
Sbjct: 376 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 435

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV-IGVTPDQITYNTIIRSFCKCK 497
           M+   I  T VT+ V+I GLCK   + +AV     +    G+  +   +  +I   CK  
Sbjct: 436 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 495

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            +  A  L  QM    L P    Y  L+DG    G++  A  L   + E  + L  +AYT
Sbjct: 496 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 555

Query: 558 TIIK--AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
           +++   +HC +  + KA                    +SF   M+  G  PD+ +C  +L
Sbjct: 556 SLVWGLSHCNQ--LQKA--------------------RSFLEEMIGEGIHPDEVLCISVL 593

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLL 640
              ++ G +    EL + ++K  LL
Sbjct: 594 KKHYELGCIDEAVELQSYLMKHQLL 618



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 254/511 (49%), Gaps = 4/511 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTN 66
           GM+ +A+   +KMK   +    ++ N LL+    L  TD +   + D+  +     V+T 
Sbjct: 74  GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 133

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+ID +C++  ++ A    +E   +   P  V+ N+++  + K+G  +     F  M  
Sbjct: 134 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 193

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
               PD  +YN LI+  C  G +   LEF  +M  +G++P+ ++YS L   F     +  
Sbjct: 194 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 253

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A K    +   G  P+  TYT LI   C+IGN+ +  +L   ML  G + NV+ Y+ L+ 
Sbjct: 254 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 313

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C + R+ EA  L  +M+  G+ P+L +Y+ LI G  K   + +A++L NE+  + I P
Sbjct: 314 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 373

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +G  + GLC  E I  A++  + +       + ++Y  ++D Y K GN  E + L 
Sbjct: 374 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 433

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH-GLEPSAVTYTTFMNAYCE 425
            ++ E  I  ++VTF  LI G CKN  V+ A    + I    GL+ +A  +T  ++  C+
Sbjct: 434 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 493

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +  ++    L ++M  K + P    YT ++ G  KQ  + EA+ L + M  IG+  D + 
Sbjct: 494 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 553

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           Y +++     C  L+KA   L +M    + P
Sbjct: 554 YTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 584



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 209/434 (48%), Gaps = 4/434 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           + + G + D V    +MK++  +  + TYN+L+          I  + Y ++K +    N
Sbjct: 175 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 234

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V + S ++D  C++  +Q AI F  +       P+  +  +++   CK+G    A  L  
Sbjct: 235 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML+ G+  +  +Y  LI GLC A  M+EA E    M   GV P+  +Y+ L  GF    
Sbjct: 295 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 354

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A +++ +L  +G  PD++ Y   I G C +  +E    +   M   G K N + Y+
Sbjct: 355 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 414

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+ +  KSG   E L LL EM+ + ++  +VT+ +LI GLCK   V KA+  +N + + 
Sbjct: 415 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 474

Query: 303 -RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +  N+    A++ GLC+   +  A   F+ ++    + D   Y  ++DG  K GN+ E
Sbjct: 475 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 534

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ L  ++ E  +   ++ + SL++G     ++  AR  L+ +   G+ P  V   + + 
Sbjct: 535 ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 594

Query: 422 AYCEEGNIQRLLAL 435
            + E G I   + L
Sbjct: 595 KHYELGCIDEAVEL 608



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 163/355 (45%), Gaps = 36/355 (10%)

Query: 327 ARMYFDS------LIMSNCIQDV--VLY---NIMIDGY----------VKLGNIGEAVQL 365
           ARMY+D+      +++S    DV  VL+   N+ + G+          + LG + EA+Q 
Sbjct: 23  ARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQC 82

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           + ++   R+ P   + N L++ F K GK  D +R    +   G  P+  TY   ++  C+
Sbjct: 83  FSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK 142

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           EG+++    L +EM+ + + P  VTY  +I G  K  +L + V   E+M  +   PD IT
Sbjct: 143 EGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVIT 202

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YN +I  FCK   L    +   +M  + L+P   +Y+ L+D  C  G ++ A    V ++
Sbjct: 203 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 262

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------------- 592
              +   +  YT++I A+C  G++  A     +M++ G E ++  YT             
Sbjct: 263 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 322

Query: 593 --KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
             +  F  M + G  P+      ++  F +  ++    EL   +   G+ PD  L
Sbjct: 323 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 377


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 194/739 (26%), Positives = 324/739 (43%), Gaps = 108/739 (14%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSE 58
           L   Y RTG +  A ++   M  +  + +  +Y  L+  L     +     L+  +K   
Sbjct: 224 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDG 283

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              NV   + +I GLC+  R+ DA L           PSV++ NA++  Y KLG    A 
Sbjct: 284 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 343

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +  LM K G HPD ++YN LI+GLC   + EEA E  N+  + G  P  +T++ L  G+
Sbjct: 344 KIKELMEKNGCHPDDWTYNTLIYGLCDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGY 402

Query: 179 HLLSQISGAWKVIQKL------------------LIK-----------------GSDPDI 203
            +  +   A ++  K+                  LIK                 G  P++
Sbjct: 403 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 462

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           +TYT +I GYC+ G V+  L++ ++M   G + N   Y+ L+  + K  ++ +A+ LL +
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M+  G+ P+++TY+ L++G C +     A +L+  M    + P+  A+  +   LC+   
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 582

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
             EA   +  ++        V Y  +IDG+ K GN   A  L  ++I++  +P   T++ 
Sbjct: 583 AEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSV 639

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L++  CK  ++ +A  +LD + L G++ +   YT  ++    EG       +  EM +  
Sbjct: 640 LLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSG 699

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII----------RSF 493
             P+  TYTV I   CK+ +L++A  L+  M   GV PD +TYN +I          R+F
Sbjct: 700 HKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 759

Query: 494 CKCK-----------------------------------------DLRKAFQLLNQMWLH 512
              K                                         +L   +QLL +M  H
Sbjct: 760 STLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKH 819

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            L PT  TY+ LI G C  G L+ A  LL  +    +S  +  YT +IK  C      KA
Sbjct: 820 GLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKA 879

Query: 573 MTFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIA 617
           ++F   M E GF+  +  Y                KS FC +L  G+  D+   +++   
Sbjct: 880 LSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDG 939

Query: 618 FHQGGDLGSVFELAAVMIK 636
             + G +   F++ ++M K
Sbjct: 940 LLKAGYVDICFQMLSIMEK 958



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 160/613 (26%), Positives = 275/613 (44%), Gaps = 36/613 (5%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DA+  I +     L +S + YN  L +L     T+ M  +Y  +       +  T + +I
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
              C++  L  A  + +        P   + NA++  YC+ G    A  LF +M   G  
Sbjct: 191 KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 250

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
            + +SY ILI GLC A  + +AL     M R G  P+   ++ L  G     ++  A  +
Sbjct: 251 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 310

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              +   G  P ++TY  +I GY ++G + + LK++E+M   G   +   Y+ L+  +C 
Sbjct: 311 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD 370

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             + +EA  LL      G  P +VT++ LI G C  +K   A+++ N+M S +   +   
Sbjct: 371 Q-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 429

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
            G ++  L +K+ + EA+   + +  +  + +V+ Y  +IDGY K G +  A+++ + + 
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
                P+  T+NSL+YG  K+ K+  A  LL  ++  G+ P+ +TYTT +   C+E +  
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE------------------------ 466
               L + ME   + P    Y V+   LCK  + +E                        
Sbjct: 550 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGF 609

Query: 467 --------AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
                   A  L+E M   G TPD  TY+ ++ + CK K L +A  +L+QM L  ++ T 
Sbjct: 610 SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTI 669

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
             Y ILID +   G   +A  +   +       +   YT  I ++C EG +  A     +
Sbjct: 670 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILK 729

Query: 579 MVEKGFEISIRDY 591
           M  +G    +  Y
Sbjct: 730 MEREGVAPDVVTY 742



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 35/183 (19%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           S ++NL   DI W L + +        V T S +I G C+  RL++A L L    GK   
Sbjct: 798 SGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLS 857

Query: 96  PS-------------------VVSLNAIMSR----------------YCKLGFAEVAKGL 120
           P+                    +S  +IMS                  C  G  E  K L
Sbjct: 858 PNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSL 917

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FC +L+ G + D  ++ IL  GL  AG ++   +  + M +      + TY+++    H 
Sbjct: 918 FCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKMHE 977

Query: 181 LSQ 183
           +S 
Sbjct: 978 VSS 980


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 194/739 (26%), Positives = 324/739 (43%), Gaps = 108/739 (14%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSE 58
           L   Y RTG +  A ++   M  +  + +  +Y  L+  L     +     L+  +K   
Sbjct: 109 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDG 168

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              NV   + +I GLC+  R+ DA L           PSV++ NA++  Y KLG    A 
Sbjct: 169 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 228

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +  LM K G HPD ++YN LI+GLC   + EEA E  N+  + G  P  +T++ L  G+
Sbjct: 229 KIKELMEKNGCHPDDWTYNTLIYGLCDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGY 287

Query: 179 HLLSQISGAWKVIQKL------------------LIK-----------------GSDPDI 203
            +  +   A ++  K+                  LIK                 G  P++
Sbjct: 288 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 347

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           +TYT +I GYC+ G V+  L++ ++M   G + N   Y+ L+  + K  ++ +A+ LL +
Sbjct: 348 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 407

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M+  G+ P+++TY+ L++G C +     A +L+  M    + P+  A+  +   LC+   
Sbjct: 408 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 467

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
             EA   +  ++        V Y  +IDG+ K GN   A  L  ++I++  +P   T++ 
Sbjct: 468 AEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSV 524

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L++  CK  ++ +A  +LD + L G++ +   YT  ++    EG       +  EM +  
Sbjct: 525 LLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSG 584

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII----------RSF 493
             P+  TYTV I   CK+ +L++A  L+  M   GV PD +TYN +I          R+F
Sbjct: 585 HKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 644

Query: 494 CKCK-----------------------------------------DLRKAFQLLNQMWLH 512
              K                                         +L   +QLL +M  H
Sbjct: 645 STLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKH 704

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            L PT  TY+ LI G C  G L+ A  LL  +    +S  +  YT +IK  C      KA
Sbjct: 705 GLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKA 764

Query: 573 MTFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIA 617
           ++F   M E GF+  +  Y                KS FC +L  G+  D+   +++   
Sbjct: 765 LSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDG 824

Query: 618 FHQGGDLGSVFELAAVMIK 636
             + G +   F++ ++M K
Sbjct: 825 LLKAGYVDICFQMLSIMEK 843



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 160/613 (26%), Positives = 275/613 (44%), Gaps = 36/613 (5%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DA+  I +     L +S + YN  L +L     T+ M  +Y  +       +  T + +I
Sbjct: 16  DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 75

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
              C++  L  A  + +        P   + NA++  YC+ G    A  LF +M   G  
Sbjct: 76  KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 135

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
            + +SY ILI GLC A  + +AL     M R G  P+   ++ L  G     ++  A  +
Sbjct: 136 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 195

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              +   G  P ++TY  +I GY ++G + + LK++E+M   G   +   Y+ L+  +C 
Sbjct: 196 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD 255

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             + +EA  LL      G  P +VT++ LI G C  +K   A+++ N+M S +   +   
Sbjct: 256 Q-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 314

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
            G ++  L +K+ + EA+   + +  +  + +V+ Y  +IDGY K G +  A+++ + + 
Sbjct: 315 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 374

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
                P+  T+NSL+YG  K+ K+  A  LL  ++  G+ P+ +TYTT +   C+E +  
Sbjct: 375 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 434

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE------------------------ 466
               L + ME   + P    Y V+   LCK  + +E                        
Sbjct: 435 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGF 494

Query: 467 --------AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
                   A  L+E M   G TPD  TY+ ++ + CK K L +A  +L+QM L  ++ T 
Sbjct: 495 SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTI 554

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
             Y ILID +   G   +A  +   +       +   YT  I ++C EG +  A     +
Sbjct: 555 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILK 614

Query: 579 MVEKGFEISIRDY 591
           M  +G    +  Y
Sbjct: 615 MEREGVAPDVVTY 627



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 35/183 (19%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           S ++NL   DI W L + +        V T S +I G C+  RL++A L L    GK   
Sbjct: 683 SGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLS 742

Query: 96  PS-------------------VVSLNAIMSR----------------YCKLGFAEVAKGL 120
           P+                    +S  +IMS                  C  G  E  K L
Sbjct: 743 PNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSL 802

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FC +L+ G + D  ++ IL  GL  AG ++   +  + M +      + TY+++    H 
Sbjct: 803 FCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKMHE 862

Query: 181 LSQ 183
           +S 
Sbjct: 863 VSS 865


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 239/448 (53%), Gaps = 20/448 (4%)

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           K+L  G +PD +T T  I G+C  G + + L   + +++ GF L+ ++Y  L++ +CK G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
               AL LL   +   ++PD+V Y+ +I G+CK   V+ A  LY+E  SKRI P+ F + 
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           A++ G C    + +A   F+ +   N I DV  ++I++DG+ K GNI EA  +   ++++
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            I P +VT++SL+ G+C   +V  A  + +T+   G+  +  +Y   +N +C+   +   
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           + L +EM  K I P  +TY+ +I GLCK  ++  A++L+++M+  G  PD ITYN+I+ +
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            CK   + KA  LL ++    + P   TY IL+ GLC +G L++A  +   L     +L 
Sbjct: 553 LCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLD 612

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE 612
             AYT +I+  C +G   +A+    +M E                    NG  PD +  E
Sbjct: 613 VYAYTVMIQGFCDKGLFDEALALLSKMEE--------------------NGCIPDAKTYE 652

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           +++++  +  +     +L   MI  GLL
Sbjct: 653 IIILSLFEKDENDMAEKLLREMIMRGLL 680



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 222/402 (55%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +LK G  PD  +    I G C+ G + +AL F + +   G   D ++Y  L  G   + +
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGE 313

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A +++++   K   PD+V Y  +I G C+  +V +   L    +S+    +V  Y+ 
Sbjct: 314 TKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNA 373

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+S  C  G++ +A+ L  +M +  + PD+ T+SIL+ G CK   + +A  +   M  + 
Sbjct: 374 LISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQS 433

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I P+   + +++ G C    + +A   F+++       +V  YNIMI+G+ K+  + EA+
Sbjct: 434 IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAM 493

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L++++  K+I P ++T++SLI G CK+G+++ A  L+D +   G +P  +TY + ++A 
Sbjct: 494 KLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDAL 553

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++ ++ + + LL +++ + I P   TYT+++KGLC+  KL++A ++ ED+ V G   D 
Sbjct: 554 CKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDV 613

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
             Y  +I+ FC      +A  LL++M  +   P + TY I+I
Sbjct: 614 YAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIII 655



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 208/421 (49%)

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           + P  ++L   +  +C  G    A      ++  G H D  SY  LI+GLC  G  + AL
Sbjct: 259 YEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAAL 318

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           E         V+PD + Y+ +  G      ++ A+ +  + + K   PD+ TY  LI G+
Sbjct: 319 ELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGF 378

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C +G +++ + L   M S+    +V  +S+L+   CK G I EA  +L  M    +KPD+
Sbjct: 379 CIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDV 438

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VTYS L+ G C  ++V+KA  ++N M  + ++ N  ++  ++ G C+ +M+ EA   F  
Sbjct: 439 VTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKE 498

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +       DV+ Y+ +IDG  K G I  A++L  ++  +   P I+T+NS++   CK   
Sbjct: 499 MHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHH 558

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V  A  LL  +K  G+ P   TYT  +   C+ G ++    + +++  K        YTV
Sbjct: 559 VDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTV 618

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I+G C +    EA+ LL  M   G  PD  TY  II S  +  +   A +LL +M +  
Sbjct: 619 MIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678

Query: 514 L 514
           L
Sbjct: 679 L 679



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 226/455 (49%), Gaps = 13/455 (2%)

Query: 53  DIKVSETPRNVYTN---------SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNA 103
           +I +  TP  +  N         +  I G C + ++  A+ F  +     F    VS   
Sbjct: 244 EISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGT 303

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           +++  CK+G  + A  L        + PD   YN +I G+C    + +A +  ++     
Sbjct: 304 LINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKR 363

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           + PD  TY+ L  GF ++ ++  A  +  K+  K   PD+ T+++L+ G+C+ GN++E  
Sbjct: 364 IFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAK 423

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
            +  +M+ Q  K +V+ YS L+   C    +++A  +   M   G+  ++ +Y+I+I G 
Sbjct: 424 NVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGF 483

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CK   V +A++L+ EM  K+I P+   + +++ GLC+   I+ A    D +       D+
Sbjct: 484 CKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDI 543

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           + YN ++D   K  ++ +A+ L  +L  + I P + T+  L+ G C++GK+ DAR++ + 
Sbjct: 544 ITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFED 603

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           + + G       YT  +  +C++G     LALL +ME     P   TY ++I  L ++ +
Sbjct: 604 LLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDE 663

Query: 464 LQEAVQLLEDM----YVIGVTPDQITYNTIIRSFC 494
              A +LL +M     ++ +T D +    + R++C
Sbjct: 664 NDMAEKLLREMIMRGLLVALTDDLVASILVRRTWC 698



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 200/414 (48%), Gaps = 20/414 (4%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           +L  G++ + I  +  +   C  G+I +AL    ++ A+G   D V+Y  LI GLCK  +
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGE 313

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
              A++L      K + P+   +  I+ G+C+ + + +A   +   +      DV  YN 
Sbjct: 314 TKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNA 373

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I G+  +G + +A+ L+ ++  K I P + TF+ L+ GFCK+G + +A+ +L  +    
Sbjct: 374 LISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQS 433

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           ++P  VTY++ M+ YC    + +  ++   M  + +     +Y ++I G CK   + EA+
Sbjct: 434 IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAM 493

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +L ++M+   + PD ITY+++I   CK   +  A +L+++M     +P   TYN ++D L
Sbjct: 494 KLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDAL 553

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C    +  A  LL  L+   I      YT ++K  C  G +  A   F  ++ KG+ + +
Sbjct: 554 CKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDV 613

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             YT                    VM+  F   G       L + M ++G +PD
Sbjct: 614 YAYT--------------------VMIQGFCDKGLFDEALALLSKMEENGCIPD 647


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 155/543 (28%), Positives = 262/543 (48%), Gaps = 76/543 (13%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + +IDGLC+  RL++A++F       +  PS+V+   +++   K    + A  + 
Sbjct: 275 NVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVL 334

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF--- 178
             M   G  P+ F +N LI G    G+M++AL   +DM   G++P+A+T++ L +GF   
Sbjct: 335 VEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRT 394

Query: 179 -----------------------------HLL---SQISGAWKVIQKLLI---------- 196
                                        HLL   S+   A K+++ LL+          
Sbjct: 395 NQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLL 454

Query: 197 --------------------------KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
                                     KG   +  T   L+ G C+ GN+EE   + + M+
Sbjct: 455 TLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMV 514

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +G  L+ I+Y+ L+   CKSG+I+EA  L  +M   G KPD  TY+ L++GL  + K+ 
Sbjct: 515 ERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMD 574

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
              ++ +E     + PN + +  +L G C  + I  A   F+ L+ +      V+YNI+I
Sbjct: 575 DVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILI 634

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
             + K GN  EA +L   +    I P+I T++S+I+G C N  V +A+ + + ++  GL 
Sbjct: 635 AAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLM 694

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+   YT  +  YC+ G + ++ ++LQEM +  I P  +TYT++I G CK    +EA +L
Sbjct: 695 PNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKL 754

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L +M   G++PD +TY  + + +CK  +L +  Q    + L  +     TY  L+D L  
Sbjct: 755 LNEMIANGISPDTVTYTVLQKGYCKENELEETLQGDTAVPLEEI-----TYTTLVDKLHP 809

Query: 531 NGD 533
           + D
Sbjct: 810 HSD 812



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 150/549 (27%), Positives = 260/549 (47%), Gaps = 38/549 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           +VYT +  I+  C+  ++ +A+ LFL+   G    P+VV+ N ++   CK G  E A   
Sbjct: 240 DVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVL-PNVVTYNNLIDGLCKSGRLEEALMF 298

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M++  ++P   +Y IL++GL      +EA     +M   G  P+   ++ L  G+  
Sbjct: 299 KGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSR 358

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A +V   + +KG  P+ VT+  L+ G+C+   +E+  ++ E +LS    +N  A
Sbjct: 359 KGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDA 418

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
            S +L  +CKS + D AL ++  +    +K +    ++L+ GLCK  K  +AI L+  + 
Sbjct: 419 CSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLA 478

Query: 301 SKR-ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            K+ ++ N+    A+L GLCE+  + E       ++    + D + YN +I G  K G I
Sbjct: 479 DKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKI 538

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA +L  +++++   P   T+N L+ G    GK+ D  R+L   K HG+ P+  TY   
Sbjct: 539 EEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALM 598

Query: 420 MNAYC-----------------------------------EEGNIQRLLALLQEMETKAI 444
           +  YC                                   + GN      L   M +  I
Sbjct: 599 LEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNI 658

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            PT  TY+ +I G+C    ++EA  + E+M   G+ P+   Y  +I  +CK   + +   
Sbjct: 659 HPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIES 718

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           +L +M  + ++P   TY I+IDG C  G+ K A  LL  +  + IS   V YT + K +C
Sbjct: 719 ILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYC 778

Query: 565 AEGDVHKAM 573
            E ++ + +
Sbjct: 779 KENELEETL 787



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/563 (25%), Positives = 265/563 (47%), Gaps = 16/563 (2%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+ S N +MS   K      +  +F  M + G+  D ++Y   I+  C  G ++EA+  
Sbjct: 204 PSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGL 263

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              MG  GV P+ +TY+ L  G     ++  A     +++    +P +VTY +L+ G  +
Sbjct: 264 FLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVK 323

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
               +E   +   M S+GF  N   ++ L+    + G +D+AL +  +M   GLKP+ VT
Sbjct: 324 FEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVT 383

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ L++G C+ +++ +A Q+   + S  +S N  A   +L  LC+      A     +L+
Sbjct: 384 HNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALL 443

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR-ISPSIVTFNSLIYGFCKNGKV 394
           + N   +  L  +++ G  K G   EA+ L+ +L +K+ ++ +  T N+L+YG C+ G +
Sbjct: 444 LRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNM 503

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +   +   +   GL    ++Y T +   C+ G I+    L ++M  +   P   TY  +
Sbjct: 504 EEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFL 563

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           +KGL  + K+ +  ++L +    GV P+  TY  ++  +C    +  A  L N++  + +
Sbjct: 564 MKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKV 623

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
           E +   YNILI      G+   A  L  +++  NI  T   Y++II   C    V +A  
Sbjct: 624 ELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKG 683

Query: 575 FFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFH 619
            F +M  +G   ++  YT               +S    M SN   P++    +M+  + 
Sbjct: 684 IFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYC 743

Query: 620 QGGDLGSVFELAAVMIKSGLLPD 642
           + G+     +L   MI +G+ PD
Sbjct: 744 KMGNTKEATKLLNEMIANGISPD 766



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 219/456 (48%), Gaps = 46/456 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM--------WDLYDDIKVS 57
           YSR G + DA+ V   M    LK +  T+N+LL     T+ M        + L + + V+
Sbjct: 356 YSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVN 415

Query: 58  ETP--------------------------RNVYTN----SIVIDGLCQQSRLQDAI-LFL 86
           E                            RN+  N    ++++ GLC+  +  +AI L+ 
Sbjct: 416 EDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWF 475

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           +    K    +  + NA++   C+ G  E    +   M++ GL  D  SYN LI G C +
Sbjct: 476 RLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKS 535

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G +EEA +    M + G +PD  TY+ L KG     ++    +V+ +    G  P+I TY
Sbjct: 536 GKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTY 595

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            +++ GYC    ++  + L   ++    +L+ + Y++L+++  K+G   EA  L   M +
Sbjct: 596 ALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRS 655

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
             + P + TYS +I G+C  D V +A  ++ EM ++ + PN F + A++ G C+   + +
Sbjct: 656 SNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQ 715

Query: 327 ARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
                  +  SNCIQ + + Y IMIDGY K+GN  EA +L  ++I   ISP  VT+  L 
Sbjct: 716 IESILQEMT-SNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQ 774

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            G+CK  ++ +  +    + L       +TYTT ++
Sbjct: 775 KGYCKENELEETLQGDTAVPL-----EEITYTTLVD 805



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/519 (21%), Positives = 230/519 (44%), Gaps = 59/519 (11%)

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
           HG E D + Y + ++  HL      A+        KG  P + +   L+    +   + +
Sbjct: 168 HG-ELDLLIYILCSQFQHL--GFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHK 224

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
             ++ + M   G  ++V  Y+  +++ CK G+IDEA+GL  +M   G+ P++VTY+ LI 
Sbjct: 225 SFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLID 284

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           GLCK  ++ +A+     M   +++P+   +G ++ GL + E   EA      +       
Sbjct: 285 GLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSP 344

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           +  ++N +IDGY + GN+ +A+++   +  K + P+ VT N+L+ GFC+  ++  A ++L
Sbjct: 345 NEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVL 404

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM---------------------- 439
           + +  + L  +    +  ++  C+       L +++ +                      
Sbjct: 405 EYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKC 464

Query: 440 --------------ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
                         + K +     T   ++ GLC++  ++E   + ++M   G+  D I+
Sbjct: 465 GKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGIS 524

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YNT+I   CK   + +AF+L  +M     +P + TYN L+ GL   G + +   +L   +
Sbjct: 525 YNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAK 584

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
           +H +      Y  +++ +C    +  A++ F ++V    E+S   Y              
Sbjct: 585 DHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYN------------- 631

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                  +++ A  + G+    F+L   M  S + P  F
Sbjct: 632 -------ILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIF 663



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 86/383 (22%), Positives = 174/383 (45%), Gaps = 25/383 (6%)

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G+ P L + + L+  L K +++HK+ ++++ MC   +  + + +   +   C+   I EA
Sbjct: 201 GVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEA 260

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F  +     + +VV YN +IDG  K G + EA+    +++E +++PS+VT+  L+ G
Sbjct: 261 VGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNG 320

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
             K  K  +A  +L  +   G  P+   +   ++ Y  +GN+   L +  +M  K + P 
Sbjct: 321 LVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPN 380

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMY--VIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
            VT+  +++G C+  ++++A Q+LE +   V+ V  D  +Y  ++   CK      A ++
Sbjct: 381 AVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSY--VLHLLCKSSKFDSALKI 438

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGD-LKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           +  + L N++   +   +L+ GLC  G  L+  D       +  ++        ++   C
Sbjct: 439 VKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLC 498

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
             G++ +      +MVE+G  +    Y                      ++    + G +
Sbjct: 499 ERGNMEEVFPVCKEMVERGLVLDGISYN--------------------TLIFGCCKSGKI 538

Query: 625 GSVFELAAVMIKSGLLPDKFLIN 647
              F+L   M+K G  PD +  N
Sbjct: 539 EEAFKLKEKMMKQGFKPDTYTYN 561


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 151/497 (30%), Positives = 254/497 (51%), Gaps = 17/497 (3%)

Query: 92  KEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF--SYNILIHGLCIAG 147
           +++G  PS  + NA++SR       E+ +GL          PD    SYNIL+  LC AG
Sbjct: 227 RQYGISPSPEACNAVLSRLPLDEAIELFQGL----------PDKNVCSYNILLKVLCGAG 276

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            +E+A +  ++M      PD +TY IL  G+  L ++  A K++  ++ +G +P+   YT
Sbjct: 277 RVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYT 333

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            ++   C  G V + L + E M+     L+   Y+ +LS  C  G +  A     EM+  
Sbjct: 334 SVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRK 393

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL  D VTY+ LI GLC+  ++ +A ++  EM ++R+  +   +  ++ G C++  + EA
Sbjct: 394 GLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEA 453

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
               ++++      +VV Y  + DG  K G++  A +L  ++  K +  +  T+NSLI G
Sbjct: 454 FQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLING 513

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G +  A R +  +   GL+P   TYTT ++A C+ G + R   LLQEM    I PT
Sbjct: 514 LCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPT 573

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            VTY V++ G C   +++   +LLE M    + P+  TYN++++ +C   +++   ++  
Sbjct: 574 IVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYK 633

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M   N+EP   TYNILI G C    +K A      + E    LT  +Y+ +I+    + 
Sbjct: 634 GMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKK 693

Query: 568 DVHKAMTFFCQMVEKGF 584
              +A   F  M ++GF
Sbjct: 694 KFVEARKLFHDMRKEGF 710



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 235/466 (50%), Gaps = 3/466 (0%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           +NV + +I++  LC   R++DA     E A     P VV+   ++  YC LG  E A  L
Sbjct: 260 KNVCSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKL 316

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M+  G+ P+A  Y  ++  LC  G + +AL    DM  H V  D   Y+ +  GF  
Sbjct: 317 LDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCN 376

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A +   ++  KG   D VTYT LI G C+ G ++E  K+ + ML++   ++ + 
Sbjct: 377 KGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVT 436

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+VL+   CK G++ EA  +   M   G+ P++VTY+ L  GLCKQ  V  A +L +EM 
Sbjct: 437 YTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMS 496

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +K +  N+  + +++ GLC+   + +A      +  +    DV  Y  +ID   K G + 
Sbjct: 497 NKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELD 556

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A  L +++++  I P+IVT+N L+ GFC +G+V   ++LL+ +    + P+A TY + M
Sbjct: 557 RAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLM 616

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             YC   N++    + + M ++ + P   TY ++IKG CK   ++EA     +M   G  
Sbjct: 617 KQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFR 676

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
               +Y+ +IR   K K   +A +L + M           YN  ID
Sbjct: 677 LTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID 722



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 213/426 (50%), Gaps = 73/426 (17%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NV +Y++LL  +C +GR+++A  L  EM +    PD+VTY ILI G C   ++  A++L 
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLL 317

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITE------------------------------ 326
           ++M ++ + PN+  + +++  LC+K  +++                              
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377

Query: 327 -----ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
                AR +FD +       D V Y  +I+G  + G + EA ++ ++++ +R+    VT+
Sbjct: 378 GDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
             L+ G+CK GK+A+A ++ +T+   G+ P+ VTYT   +  C++G++Q    LL EM  
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           K +     TY  +I GLCK   L +A++ + DM   G+ PD  TY T+I + CK  +L +
Sbjct: 498 KGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDR 557

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI------------ 549
           A  LL +M  + ++PT  TYN+L++G C++G ++    LL  + E NI            
Sbjct: 558 AHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMK 617

Query: 550 ---------SLTKV--------------AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
                    S T++               Y  +IK HC    + +A  F  +M+EKGF +
Sbjct: 618 QYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRL 677

Query: 587 SIRDYT 592
           +   Y+
Sbjct: 678 TASSYS 683



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 192/411 (46%), Gaps = 26/411 (6%)

Query: 254 IDEALGLLYEMEAVGLKPD--LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           +DEA+ L   +      PD  + +Y+IL++ LC   +V  A QL++EM S    P+   +
Sbjct: 247 LDEAIELFQGL------PDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTY 297

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
           G ++ G C    +  A    D ++      +  +Y  ++      G + +A+ +   ++ 
Sbjct: 298 GILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVH 357

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
            ++      + +++ GFC  G +  ARR  D ++  GL    VTYTT +N  C  G ++ 
Sbjct: 358 HKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKE 417

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              +LQEM  + +    VTYTV++ G CK+ K+ EA Q+   M   GV P+ +TY  +  
Sbjct: 418 AEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSD 477

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
             CK  D++ A +LL++M    LE  + TYN LI+GLC  G L  A   +  +    +  
Sbjct: 478 GLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKP 537

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT--KSFFCM----------- 598
               YTT+I A C  G++ +A     +M++ G + +I  Y    + FCM           
Sbjct: 538 DVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLL 597

Query: 599 --MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             ML     P+      ++  +  G ++ S  E+   M    + P++   N
Sbjct: 598 EWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYN 648


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/621 (26%), Positives = 298/621 (47%), Gaps = 45/621 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETP 60
           RT    D VF   +M EL     + +YN+L+  L          +++  +  D   + +P
Sbjct: 144 RTDDAMDMVF--RRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSP 201

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            NV + S +IDG  ++  +  A     E  G+ F P VV+ ++++   CK      A+ +
Sbjct: 202 -NVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAI 260

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M   G+ P+  +YNI+I G C  G +EEA+     M   G++PD +TY +L + +  
Sbjct: 261 LQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCK 320

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           + + + A  V   ++ KG  P+   Y +L+ GY   G + +   L ++M+  G      A
Sbjct: 321 IGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA 380

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           +++L+ +  K G +D+A+    EM   GL+PD+V+YS +I  LCK  +V  A+  +N+M 
Sbjct: 381 FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMV 440

Query: 301 SKRISPN-----SFAHG------------------------------AILLGLCEKEMIT 325
           S+ +SPN     S  HG                               I+  LC++  + 
Sbjct: 441 SEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVV 500

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA+ +FD +I      +VV YN +IDGY  +G + E+++ + +++   + P   T+N+L+
Sbjct: 501 EAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALL 560

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G+ KNG+V DA  L   +    ++  A+T    ++   + G I     L  +M  +   
Sbjct: 561 NGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQ 620

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
               TY  V+ GLC+   + EA+++ ED+       D  T+N +I +  K   + +A  L
Sbjct: 621 LRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSL 680

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
            + M L    P   TY+++I      G L+ +D L +S++++  +        II+    
Sbjct: 681 FSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLE 740

Query: 566 EGDVHKAMTFFCQMVEKGFEI 586
           +GDV +A T+  ++ EK F +
Sbjct: 741 KGDVRRAGTYLTKIDEKNFSV 761



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 135/562 (24%), Positives = 269/562 (47%), Gaps = 46/562 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSE 58
           + + G V  A F+  +M        + TY+SL+  L       +   I+  ++D   +  
Sbjct: 213 FFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMP- 271

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              N  T +I+I G C   +L++A+  L++ +G    P VV+   ++  YCK+G    A+
Sbjct: 272 ---NTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEAR 328

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSM----------------------------- 149
            +F  M++ G  P++  Y+IL+HG    G++                             
Sbjct: 329 SVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAY 388

Query: 150 ------EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
                 ++A+    +M ++G+ PD ++YS +      + ++  A     +++ +G  P+I
Sbjct: 389 AKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNI 448

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           +++T LI G C IG  ++  +L   M+++G   + I  + ++ ++CK GR+ EA      
Sbjct: 449 ISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDM 508

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           +  +G+KP++V+Y+ LI G C   K+ ++I+ ++ M S  + P+S+ + A+L G  +   
Sbjct: 509 VIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGR 568

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           + +A   +  +   +     +  NI++ G  + G I  A +LY +++++     I T+N+
Sbjct: 569 VEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNT 628

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           ++ G C+N  V +A R+ + ++    E    T+   +NA  + G I    +L   M  + 
Sbjct: 629 VLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRG 688

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             P  +TY+++IK   ++  L+E+  L   M   G   D    N IIR   +  D+R+A 
Sbjct: 689 PVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAG 748

Query: 504 QLLNQMWLHNLEPTSATYNILI 525
             L ++   N    ++T  +LI
Sbjct: 749 TYLTKIDEKNFSVEASTAALLI 770



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 210/483 (43%), Gaps = 54/483 (11%)

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY-EMEA 266
           +LI  +C +G ++       + L  G+++  +  + L+  +C   R D+A+ +++  M  
Sbjct: 99  ILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPE 158

Query: 267 VGLKPDLVTYSILIRGLC--------------------------------------KQDK 288
           +G  PD+ +Y+ LI+GLC                                      K+ +
Sbjct: 159 LGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGE 218

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V KA  L++EM  +   P+   + +++ GLC+ + + +A      +     + +   YNI
Sbjct: 219 VDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNI 278

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           MI GY  LG + EAV+L +++    + P +VT+  LI  +CK G+ A+AR + D++   G
Sbjct: 279 MIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKG 338

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
            +P++  Y   ++ Y  +G +  +  LL  M    I   H  + ++I    K   + +A+
Sbjct: 339 QKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAM 398

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
               +M   G+ PD ++Y+T+I   CK   +  A    NQM    L P   ++  LI GL
Sbjct: 399 TAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGL 458

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C  G+ K  + L   +    I    +   TI+   C EG V +A  FF  ++  G + ++
Sbjct: 459 CSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNV 518

Query: 589 RDYTKSF---------------FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             Y                   F  M+S G  PD      +L  + + G +     L   
Sbjct: 519 VSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYRE 578

Query: 634 MIK 636
           M +
Sbjct: 579 MFR 581



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 126/287 (43%), Gaps = 27/287 (9%)

Query: 379 VTFNSLIYGFCKNGKVADA-----RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           VT N LI G C   +  DA     RR+ +     G  P   +Y   +   C E   Q  L
Sbjct: 130 VTLNQLIKGLCDGKRTDDAMDMVFRRMPEL----GYTPDVFSYNALIKGLCVEKKSQEAL 185

Query: 434 ALLQEMETKA---IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
            LL  M         P  V+Y+ +I G  K+ ++ +A  L ++M   G  PD +TY+++I
Sbjct: 186 ELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLI 245

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CK + + KA  +L  M+   + P + TYNI+I G C  G L+ A  LL  +    + 
Sbjct: 246 DGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQ 305

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYT--------KSF 595
              V Y  +I+ +C  G   +A + F  MV KG       + I +  Y         +  
Sbjct: 306 PDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDL 365

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             +M+ +G P +     +++ A+ + G +         M ++GL PD
Sbjct: 366 LDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 412


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 156/510 (30%), Positives = 247/510 (48%), Gaps = 7/510 (1%)

Query: 23  KELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRL 79
           +   +  S ++YN +L  L   D   D   LY  +     P   +T  +    LC+  R 
Sbjct: 134 RRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRA 193

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
            DA+  L+  A     P  V    ++      G    A  L   ML  G   D  ++N L
Sbjct: 194 GDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDL 253

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           + GLC  G + EA    + M   G  P  +TY  L +G     Q   A  ++ +L     
Sbjct: 254 VLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRL----P 309

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
           + ++V    +I G    G +    +L E+M S+G   +V  YS+L+  +CK GR   A+ 
Sbjct: 310 EVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVR 369

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           +L EME  G  P++VTYS L+   C+      A  + ++M +K  S NS  +  I+  LC
Sbjct: 370 MLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALC 429

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           +   + +A      +    C  D+  YN MI        + EA  ++R LIE+ +  + +
Sbjct: 430 KDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGI 489

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T+N+LI+   +NG+  +  RL   + LHG +   ++Y   + A C+EGN+ R +ALL+EM
Sbjct: 490 TYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEM 549

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
            TK I P + +Y ++I  LCK  K+++A++L ++M   G+TPD +TYNT+I   CK    
Sbjct: 550 VTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWT 609

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
             A  LL ++   N+ P   TYNILI   C
Sbjct: 610 HAALNLLEKLPNENVHPDIVTYNILISWHC 639



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 231/500 (46%), Gaps = 31/500 (6%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS  S N ++S   +      A  L+  ML+  + P  F++ +    LC  G   +AL  
Sbjct: 140 PSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALAL 199

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M RHG  PDA+ Y  +         ++ A  ++ ++L+ G   D+ T+  L+ G C 
Sbjct: 200 LRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCG 259

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA---LGLLYEMEAV----- 267
           +G V E  +L + M++QG   +V+ Y  LL  +C++ + DEA   LG L E+  V     
Sbjct: 260 LGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTV 319

Query: 268 -----------------------GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
                                  G  PD+ TYSIL+ GLCK  +   A+++ +EM  K  
Sbjct: 320 IRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGC 379

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +PN   +  +L   C   M  +AR   D ++      +   YN +I    K G + +A +
Sbjct: 380 APNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATR 439

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L +++  +   P I T+N++IY  C N  + +A  +   +   G+  + +TY T ++A  
Sbjct: 440 LVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALL 499

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             G  Q  L L  EM         ++Y  +IK LCK+  +  ++ LLE+M   G+ P+  
Sbjct: 500 RNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNF 559

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           +YN +I   CK   +R A +L  +M    L P   TYN LI+GLC  G    A  LL  L
Sbjct: 560 SYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKL 619

Query: 545 QEHNISLTKVAYTTIIKAHC 564
              N+    V Y  +I  HC
Sbjct: 620 PNENVHPDIVTYNILISWHC 639



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 225/446 (50%), Gaps = 4/446 (0%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L D++ +     +V T + ++ GLC   R+++A   +     +   PSVV+   ++   C
Sbjct: 234 LLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLC 293

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           +   A+ A    C ML      +    N +I G    G +  A E    MG  G  PD  
Sbjct: 294 RTRQADEA----CAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVH 349

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           TYSIL  G   L +   A +++ ++  KG  P+IVTY+ L+  +C+ G  ++   + + M
Sbjct: 350 TYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM 409

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           L++GF +N   Y+ ++ ++CK G++D+A  L+ EM++ G KPD+ TY+ +I  LC  D +
Sbjct: 410 LAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLM 469

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A  ++  +  + +  N   +  ++  L       E       +++  C  DV+ YN +
Sbjct: 470 EEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGL 529

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           I    K GN+  ++ L  +++ K I P+  ++N LI   CK GKV DA  L   +   GL
Sbjct: 530 IKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGL 589

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P  VTY T +N  C+ G     L LL+++  + + P  VTY ++I   CK   L +A  
Sbjct: 590 TPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAM 649

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCK 495
           LL+     G+ P++ T+  ++++F +
Sbjct: 650 LLDKAISGGIVPNERTWGMMVQNFVR 675



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 210/455 (46%), Gaps = 42/455 (9%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           G V +A  ++ +M  +     + T+N L   L  L        L D +       +V T 
Sbjct: 226 GGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTY 285

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
             ++ GLC+  +  +A   L    G+    +VV LN ++      G    A  L+ +M  
Sbjct: 286 GFLLQGLCRTRQADEACAML----GRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGS 341

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS-------------- 172
            G  PD  +Y+IL+HGLC  G    A+   ++M   G  P+ +TYS              
Sbjct: 342 KGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDD 401

Query: 173 -------ILAKGFHLLSQ--------------ISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
                  +LAKGF + SQ              +  A +++Q++  +G  PDI TY  +I 
Sbjct: 402 ARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIY 461

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
             C    +EE   +   ++ +G   N I Y+ L+ ++ ++GR  E L L  EM   G + 
Sbjct: 462 HLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQL 521

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D+++Y+ LI+ LCK+  V +++ L  EM +K I PN+F++  ++  LC+   + +A    
Sbjct: 522 DVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELS 581

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             ++      D+V YN +I+G  K+G    A+ L  +L  + + P IVT+N LI   CK 
Sbjct: 582 KEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKV 641

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             + DA  LLD     G+ P+  T+   +  +  +
Sbjct: 642 RLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQ 676



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 146/342 (42%), Gaps = 5/342 (1%)

Query: 256 EALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            AL LL +M     + P   +Y++++  L + D    A+ LY  M   R+ P +F  G  
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
              LC      +A      +    C+ D VLY  +I   V  G + EA  L  +++    
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
           +  + TFN L+ G C  G+V +A RL+D +   G  PS VTY   +   C         A
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +L  +    +    V    VI+G   + KL  A +L E M   G  PD  TY+ ++   C
Sbjct: 304 MLGRLPEVNV----VMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K      A ++L++M      P   TY+ L+   C NG   +A  +L  +     S+   
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 419

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFF 596
            Y  II A C +G + +A     +M  +G +  I  Y    +
Sbjct: 420 GYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIY 461



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 154/309 (49%), Gaps = 5/309 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNV 63
           + G    AV ++ +M+E     +I TY++LL++      MWD    + D +       N 
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNG-MWDDARAMLDQMLAKGFSMNS 418

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
              + +I  LC+  +L  A   +QE   +   P + + N ++   C     E A+ +F  
Sbjct: 419 QGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRN 478

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +++ G+  +  +YN LIH L   G  +E L   ++M  HG + D I+Y+ L K       
Sbjct: 479 LIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGN 538

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  +  ++++++ KG  P+  +Y +LI   C+ G V + L+L + ML+QG   +++ Y+ 
Sbjct: 539 VDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNT 598

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++ +CK G    AL LL ++    + PD+VTY+ILI   CK   +  A  L ++  S  
Sbjct: 599 LINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGG 658

Query: 304 ISPNSFAHG 312
           I PN    G
Sbjct: 659 IVPNERTWG 667



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 126/250 (50%), Gaps = 3/250 (1%)

Query: 4   FVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETP 60
           +   + G +  A  ++ +MK    K  I TYN+++Y+L + D+M +   ++ ++      
Sbjct: 426 YALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVV 485

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N  T + +I  L +  R Q+ +    E         V+S N ++   CK G  + +  L
Sbjct: 486 ANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMAL 545

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M+  G+ P+ FSYN+LI+ LC AG + +ALE + +M   G+ PD +TY+ L  G   
Sbjct: 546 LEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCK 605

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +     A  +++KL  +   PDIVTY +LI  +C++  +++   L +  +S G   N   
Sbjct: 606 VGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERT 665

Query: 241 YSVLLSSMCK 250
           + +++ +  +
Sbjct: 666 WGMMVQNFVR 675



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 118/284 (41%), Gaps = 25/284 (8%)

Query: 360 GEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           G A+ L  Q+  +  +SPS  ++N ++    +    ADA  L   +    + P+  T+  
Sbjct: 123 GRALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 182

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
              A C  G     LALL+ M      P  V Y  VI  L  Q  + EA  LL++M ++G
Sbjct: 183 AARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMG 242

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
              D  T+N ++   C    +R+A +L+++M      P+  TY  L+ GLC       A 
Sbjct: 243 CAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEAC 302

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            +L  L E N+    V   T+I+    EG + +A                       + M
Sbjct: 303 AMLGRLPEVNV----VMLNTVIRGCLTEGKLARA--------------------TELYEM 338

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           M S G PPD     +++    + G  GS   +   M + G  P+
Sbjct: 339 MGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPN 382


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 176/669 (26%), Positives = 305/669 (45%), Gaps = 37/669 (5%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNLRH------TDIMWDLYD------DIKVSET 59
           ++DA+ +  +M       S++ +N LL  +        ++++  L++       IKV+ +
Sbjct: 32  LNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPS 91

Query: 60  PRNVYTNSIVIDGLCQQSRLQD--AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +T +I+I   C+  RL+   A   L    G     +V+  + ++   C     + A
Sbjct: 92  S---FTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVI-FSQLLKGLCDAKRVDEA 147

Query: 118 KG-LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV---EPDAITYSI 173
              L   M ++G  PD FSY+IL+ G C     EEALE  + M   G     P+ +TY+ 
Sbjct: 148 TDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTT 207

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +  G      +  A  V Q ++ KG  P+  TYT LI GY  IG  +E +++ + M + G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHG 267

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            + +   Y+VLL  +CK+GR  EA  +   +   G+KP++  Y IL+ G   +  + +  
Sbjct: 268 LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMH 327

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
              + M    +SP+      +     +K MI EA   FD +       ++V Y  +ID  
Sbjct: 328 SFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDAL 387

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            KLG + +AV  + Q+I++ ++P I  F+SL+YG C   K   A  L   +   G+    
Sbjct: 388 CKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDT 447

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           V + T M   C EG +     L+  M    + P  ++Y  ++ G C   ++ EA +LL+ 
Sbjct: 448 VFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDV 507

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           +  IG+ PD++TYNT++  +CK + +  A+ L  +M +  L P   TYN ++ GL   G 
Sbjct: 508 IVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGR 567

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI----- 588
              A  L +S+      +    Y  II   C    V +A   F  +  K  ++ I     
Sbjct: 568 FSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANI 627

Query: 589 ----------RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
                     ++     F  + + G  PD E   ++     + G L  + EL + M ++G
Sbjct: 628 MIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENG 687

Query: 639 LLPDKFLIN 647
             P+  ++N
Sbjct: 688 TAPNSRMLN 696



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 258/554 (46%), Gaps = 3/554 (0%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           + DD   S TP NV T + VIDGLC+   +  A    Q    K   P+  +   ++  Y 
Sbjct: 190 MADDGDGSHTP-NVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYL 248

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
            +G  +    +   M  +GL PD + Y +L+  LC  G   EA    + + R G++P+  
Sbjct: 249 SIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVT 308

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
            Y IL  G+     +S     +  ++  G  PD   + ++ C Y +   ++E + + + M
Sbjct: 309 IYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKM 368

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
             Q    N++ Y  L+ ++CK GR+D+A+    +M   G+ PD+  +S L+ GLC  DK 
Sbjct: 369 RQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKW 428

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            KA +L+ E+  + I  ++     ++  LC +  + EA+   D ++      DV+ YN +
Sbjct: 429 EKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTL 488

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           +DG+   G I EA +L   ++   + P  VT+N+L++G+CK  ++ DA  L   + + GL
Sbjct: 489 VDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGL 548

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P  VTY T ++   + G       L   M          TY ++I GLCK   + EA +
Sbjct: 549 TPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFK 608

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +   +    +  D  T N +I +  K      A  L   +  + L P   TY ++ + L 
Sbjct: 609 MFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLI 668

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             G L+  D L  +++E+  +        +++     GD+++A  +  ++ EK F  S+ 
Sbjct: 669 KEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNF--SLE 726

Query: 590 DYTKSFFCMMLSNG 603
             T S    + S G
Sbjct: 727 ASTTSMLISIYSRG 740



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 200/419 (47%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +++D +       NV    I++ G   +  L +   FL    G    P     N +   Y
Sbjct: 293 NIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAY 352

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
            K    + A  +F  M +  L P+  +Y  LI  LC  G +++A+   N M   G+ PD 
Sbjct: 353 AKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDI 412

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
             +S L  G   + +   A ++  ++L +G   D V +  L+C  C+ G V E  +L ++
Sbjct: 413 FVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDL 472

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           ML  G + +VI+Y+ L+   C +GRIDEA  LL  + ++GLKPD VTY+ L+ G CK  +
Sbjct: 473 MLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARR 532

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           +  A  L+ EM  K ++P+   +  IL GL +    +EA+  + S+I S    ++  YNI
Sbjct: 533 IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 592

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I+G  K   + EA +++  L  K +   I T N +I    K G+  DA  L  TI  +G
Sbjct: 593 IINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYG 652

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           L P   TY        +EG+++ L  L   ME     P       +++ L  +  +  A
Sbjct: 653 LVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRA 711



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 187/389 (48%), Gaps = 1/389 (0%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           ++D ++      N+ T   +ID LC+  R+ DA+L   +   +   P +   ++++   C
Sbjct: 364 IFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLC 423

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
            +   E A+ LF  +L  G+  D   +N L+  LC  G + EA    + M R GV PD I
Sbjct: 424 TVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVI 483

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+ L  G  L  +I  A K++  ++  G  PD VTY  L+ GYC+   +++   L   M
Sbjct: 484 SYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREM 543

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           L +G   +V+ Y+ +L  + ++GR  EA  L   M     + ++ TY+I+I GLCK + V
Sbjct: 544 LMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFV 603

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A ++++ +CSK +  + F    ++  L +     +A   F ++     + DV  Y ++
Sbjct: 604 DEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLI 663

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
            +  +K G++ E  +L+  + E   +P+    N+L+      G +  A   L  +     
Sbjct: 664 AENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNF 723

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
              A T +  ++ Y   G  Q+L   L E
Sbjct: 724 SLEASTTSMLISIY-SRGEYQQLAKSLPE 751



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 3/213 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y +   + DA  +  +M    L   + TYN++L+ L  T    +   LY  +  S T  N
Sbjct: 527 YCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMN 586

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           +YT +I+I+GLC+ + + +A         K+    + + N ++    K G  E A  LF 
Sbjct: 587 IYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFA 646

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +  YGL PD  +Y ++   L   GS+EE  E  + M  +G  P++   + L +      
Sbjct: 647 TISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRG 706

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            I+ A   + KL  K    +  T ++LI  Y +
Sbjct: 707 DINRAGAYLSKLDEKNFSLEASTTSMLISIYSR 739


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 234/441 (53%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           +V SLN +++  C+L   + A  +   M K G+ PDA ++N LI+GLC  G ++EA+   
Sbjct: 130 NVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLF 189

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           N+M   G EP+ I+Y+ +  G         A +V +K+      P++VTY  +I   C+ 
Sbjct: 190 NEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKD 249

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
             V E ++    M+ +G   +V+ Y+ +L   C  G+++EA  L  EM    + PD VT+
Sbjct: 250 RLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTF 309

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +IL+ GLCK+  V +A  +   M  K   PN++ + A++ G C    + EA      +I 
Sbjct: 310 NILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIG 369

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
             C  ++  YNI+I+GY K   + EA +L  ++ EK ++P  VT+++L+ G C+ G+  +
Sbjct: 370 KGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPRE 429

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  L   +   GL P  + Y+  ++ +C+ G++   L LL+EM  + I P  + YT++I+
Sbjct: 430 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIR 489

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           G+    KL+ A +L   +   G+ PD  TYN +I+   K     +A++   +M      P
Sbjct: 490 GMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLP 549

Query: 517 TSATYNILIDGLCVNGDLKNA 537
            S +YN++I G   N D   A
Sbjct: 550 DSCSYNVIIQGFLQNQDSSTA 570



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 244/503 (48%), Gaps = 15/503 (2%)

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           S+++AL     M R    P  + +           Q S A  +  ++ + G   ++ +  
Sbjct: 76  SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           VLI   C++ +V+  + +   M   G + + I ++ L++ +C  G+I EA+GL  EM   
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G +P++++Y+ +I GLCK      A++++ +M   R  PN   +  I+  LC+  ++ EA
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
             +   ++      DVV YN ++ G+  LG + EA +L+++++ + + P  VTFN L+ G
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G V++AR + +T+   G EP+A TY   M+ YC    +   + +L  M  K   P 
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPN 375

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             +Y ++I G CK  ++ EA +LL +M    +TPD +TY+T+++  C+    R+A  L  
Sbjct: 376 LSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFK 435

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M    L P    Y+IL+DG C +G L  A  LL  + E  I    + YT +I+     G
Sbjct: 436 EMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAG 495

Query: 568 DVHKAMTFFCQMVEKGFEISI---------------RDYTKSFFCMMLSNGFPPDQEICE 612
            +  A   F ++   G    I                D    FF  M  +GF PD     
Sbjct: 496 KLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYN 555

Query: 613 VMLIAFHQGGDLGSVFELAAVMI 635
           V++  F Q  D  +  +L   M+
Sbjct: 556 VIIQGFLQNQDSSTAIQLIDEMV 578



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 253/489 (51%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PSVV     +    K      A  L   M  +G+  + +S N+LI+ LC    ++ A+  
Sbjct: 94  PSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSV 153

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + G++PDAIT++ L  G     +I  A  +  +++  G +P++++Y  +I G C+
Sbjct: 154 MGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCK 213

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            GN    +++   M     K NV+ Y+ ++ S+CK   ++EA+  L EM   G+ PD+VT
Sbjct: 214 NGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVT 273

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ ++ G C   ++++A +L+ EM  + + P++     ++ GLC++ M++EAR   +++ 
Sbjct: 274 YNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMT 333

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 +   YN ++DGY     + EA+++   +I K  +P++ ++N LI G+CK+ ++ 
Sbjct: 334 EKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMN 393

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A+RLL  +    L P  VTY+T M   C+ G  +  L L +EM +  + P  + Y++++
Sbjct: 394 EAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILL 453

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G CK   L EA++LL++M+   + P+ I Y  +IR       L  A +L +++    + 
Sbjct: 454 DGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIR 513

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TYN++I GL   G    A      +++        +Y  II+      D   A+  
Sbjct: 514 PDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQL 573

Query: 576 FCQMVEKGF 584
             +MV K F
Sbjct: 574 IDEMVGKRF 582



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 234/464 (50%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M++    P    +   +  +        A+   N M   GV  +  + ++L      
Sbjct: 84  FYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCR 143

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           LS +  A  V+ K+   G  PD +T+  LI G C  G ++E + L   M+  G + NVI+
Sbjct: 144 LSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVIS 203

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ +++ +CK+G    A+ +  +ME    KP++VTY+ +I  LCK   V++A++  +EM 
Sbjct: 204 YNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMV 263

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            + I P+   +  IL G C    + EA   F  ++  N + D V +NI++DG  K G + 
Sbjct: 264 DRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVS 323

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  +   + EK   P+  T+N+L+ G+C + ++ +A ++L  +   G  P+  +Y   +
Sbjct: 324 EARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILI 383

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YC+   +     LL EM  K + P  VTY+ +++GLC+  + +EA+ L ++M   G+ 
Sbjct: 384 NGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLL 443

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD + Y+ ++  FCK   L +A +LL +M    ++P    Y ILI G+ + G L+ A  L
Sbjct: 444 PDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKEL 503

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
              L    I      Y  +IK    EG   +A  FF +M + GF
Sbjct: 504 FSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGF 547



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 230/426 (53%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I+GLC + ++++A+    E       P+V+S N +++  CK G   +A  +F  M
Sbjct: 168 TFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKM 227

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            +    P+  +YN +I  LC    + EA+EF ++M   G+ PD +TY+ +  GF  L Q+
Sbjct: 228 EQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQL 287

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A ++ ++++ +   PD VT+ +L+ G C+ G V E   + E M  +G + N   Y+ L
Sbjct: 288 NEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNAL 347

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   C   ++DEA+ +L  M   G  P+L +Y+ILI G CK  ++++A +L +EM  K +
Sbjct: 348 MDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNL 407

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +P++  +  ++ GLC+     EA   F  +  S  + D++ Y+I++DG+ K G++ EA++
Sbjct: 408 TPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK 467

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L +++ E+RI P+I+ +  LI G    GK+  A+ L   +   G+ P   TY   +    
Sbjct: 468 LLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLL 527

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +EG         ++ME     P   +Y V+I+G  +      A+QL+++M     + D  
Sbjct: 528 KEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSS 587

Query: 485 TYNTII 490
           T+  ++
Sbjct: 588 TFQMLL 593



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 219/427 (51%), Gaps = 3/427 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G + +AV +  +M     + ++ +YN+++  L    +T +   ++  ++ +    NV T 
Sbjct: 180 GKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTY 239

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +ID LC+   + +A+ FL E   +   P VV+ N I+  +C LG    A  LF  M+ 
Sbjct: 240 NTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVG 299

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + PD  ++NIL+ GLC  G + EA   +  M   G EP+A TY+ L  G+ L +Q+  
Sbjct: 300 RNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDE 359

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A KV+  ++ KG  P++ +Y +LI GYC+   + E  +L   M  +    + + YS L+ 
Sbjct: 360 AIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQ 419

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C+ GR  EAL L  EM + GL PDL+ YSIL+ G CK   + +A++L  EM  +RI P
Sbjct: 420 GLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKP 479

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N   +  ++ G+     +  A+  F  L       D+  YN+MI G +K G   EA + +
Sbjct: 480 NIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFF 539

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           R++ +    P   ++N +I GF +N   + A +L+D +        + T+   ++    +
Sbjct: 540 RKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDLESHD 599

Query: 427 GNIQRLL 433
             I R +
Sbjct: 600 EIISRFM 606



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 141/301 (46%), Gaps = 32/301 (10%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + GMV +A  V   M E   + +  TYN+L+                             
Sbjct: 318 KEGMVSEARCVSETMTEKGAEPNAYTYNALM----------------------------- 348

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
              DG C  +++ +AI  L    GK   P++ S N +++ YCK      AK L   M + 
Sbjct: 349 ---DGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEK 405

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            L PD  +Y+ L+ GLC  G   EAL    +M   G+ PD + YSIL  GF     +  A
Sbjct: 406 NLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEA 465

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            K+++++  +   P+I+ YT+LI G    G +E   +L   + + G + ++  Y+V++  
Sbjct: 466 LKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKG 525

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           + K G  DEA     +ME  G  PD  +Y+++I+G  +      AIQL +EM  KR S +
Sbjct: 526 LLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSAD 585

Query: 308 S 308
           S
Sbjct: 586 S 586



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 24/240 (10%)

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT--VVIKGLCKQWKLQEA 467
            PS V +  F+ +  ++      ++L  +M+    G TH  Y+  V+I  LC+   +  A
Sbjct: 93  RPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDL--FGVTHNVYSLNVLINCLCRLSHVDFA 150

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           V ++  M+ +G+ PD IT+NT+I   C    +++A  L N+M     EP   +YN +I+G
Sbjct: 151 VSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVING 210

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC NG+   A  +   ++++      V Y TII + C +  V++A+ F  +MV++     
Sbjct: 211 LCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDR----- 265

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                          G PPD      +L  F   G L     L   M+   ++PD    N
Sbjct: 266 ---------------GIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFN 310


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/594 (26%), Positives = 290/594 (48%), Gaps = 19/594 (3%)

Query: 73  LCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG--L 129
           LC   R  +A+ + L   +     P+ +S N ++   C    ++ A  +   M K G   
Sbjct: 201 LCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRC 260

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            PD  S+N +IHG    G + +A    N+M + GVEPD +TY+ +         +  A  
Sbjct: 261 SPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAEL 320

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           V+++++ KG +PD +TYT +I GY   G+ +E  K+   M S+G    ++ ++  +SS+C
Sbjct: 321 VLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLC 380

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K GR  +A  +   M   G  PDLV+YSIL+ G   + +      L++ M  K I  N  
Sbjct: 381 KHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCH 440

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
               ++    ++ M+ EA + F  +       DVV Y+ +I  + ++G + +A++ + Q+
Sbjct: 441 CFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQM 500

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL-EPSAVTYTTFMNAYCEEGN 428
           I   + P+ V ++SLI+GFC +G +  A+ L+  +   G+  P+ V +++ +++ C EG 
Sbjct: 501 ISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGR 560

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +     +   +      PT VT+  +I G C   K+++A  +L+ M  +G+ PD +TYNT
Sbjct: 561 VMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNT 620

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           ++  +CK   +     L  +M    ++PT+ TY+I++DGL   G    A  +   + +  
Sbjct: 621 LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSG 680

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM--VEKGFEISI-------------RDYTK 593
            ++    Y  ++K  C      +A+T F ++  ++  F+I+I             R+   
Sbjct: 681 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAN 740

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             F  + ++G  P+     VM+    + G +     + + M KSG  P   L+N
Sbjct: 741 DLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLN 794



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 170/619 (27%), Positives = 283/619 (45%), Gaps = 85/619 (13%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETA--GKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           N  + + VI  LC  SR Q+A+  +Q  A  G    P VVS N ++  + K G    A  
Sbjct: 226 NAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 285

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M++ G+ PD  +YN ++  LC A +M++A      M   GVEPD +TY+ +  G+ 
Sbjct: 286 LINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGY- 344

Query: 180 LLSQISGAWK---------------------------------------VIQKLLIKGSD 200
                SG WK                                       + Q +  KG  
Sbjct: 345 ---SCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHM 401

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           PD+V+Y++L+ GY   G   +   L   M  +G   N   +++L+S+  K G +DEA+ +
Sbjct: 402 PDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLV 461

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
             EM+  G++PD+VTYS LI   C+  ++  A++ +++M S  + PN+  + +++ G C 
Sbjct: 462 FTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCM 521

Query: 321 KEMITEARMYFDSLIMSNCI--QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
              + +A+    S +MS  I   ++V ++ +I      G + +A  ++  +I     P+I
Sbjct: 522 HGDLVKAKELV-SEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTI 580

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VTFNSLI G+C  GK+  A  +LD +   G+EP  VTY T ++ YC+ G I   L L +E
Sbjct: 581 VTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFRE 640

Query: 439 METKAIGPTHVTYTVV-----------------------------------IKGLCKQWK 463
           M  K + PT VTY++V                                   +KGLC+   
Sbjct: 641 MLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDL 700

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
             EA+ L   +  +    D    NT+I +  K +   +A  L   +    L P  +TY +
Sbjct: 701 TDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGV 760

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +I  L   G ++ AD +  S+++   + +      II+    +GD+ KA  +  ++   G
Sbjct: 761 MIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKV--DG 818

Query: 584 FEISIRDYTKSFFCMMLSN 602
             IS+   T S    + S+
Sbjct: 819 TIISLEASTTSLLMSLFSS 837



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 207/415 (49%), Gaps = 1/415 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N +  +I+I    ++  + +A+L   E  G+   P VV+ + ++S +C++G    A   F
Sbjct: 438 NCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKF 497

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV-EPDAITYSILAKGFHL 180
             M+  GL P+   Y+ LIHG C+ G + +A E  ++M   G+  P+ + +S +      
Sbjct: 498 SQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCN 557

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             ++  A  V   ++  G  P IVT+  LI GYC +G +E+   + + M+S G + +V+ 
Sbjct: 558 EGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVT 617

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+S  CKSG+ID+ L L  EM    +KP  VTYSI++ GL    +   A ++++EM 
Sbjct: 618 YNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMI 677

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
               + +   +  +L GLC  ++  EA   F  L   +C  D+ + N +I+   K+    
Sbjct: 678 DSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRRE 737

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  L+  +    + P++ T+  +I+   K G V +A  +  +++  G  PS+      +
Sbjct: 738 EANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 797

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
               ++G+I +    + +++   I     T ++++     + K +E ++ L   Y
Sbjct: 798 RMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKFLPAKY 852



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 183/427 (42%), Gaps = 74/427 (17%)

Query: 236 LNVIAYSVLLS-----------------------------------SMCKSGRIDEALG- 259
           L+V  Y +L+                                     +C + R DEA+  
Sbjct: 154 LSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDV 213

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLC----------------------------------- 284
           LL+ M  +G  P+ ++Y+ +I+ LC                                   
Sbjct: 214 LLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 273

Query: 285 --KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
             KQ +V KA  L NEM  K + P+   + +I+  LC+   + +A +    ++      D
Sbjct: 274 FFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPD 333

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
            + Y  +I GY   G+  E+ +++R++  K + P IVTFNS +   CK+G+  DA  +  
Sbjct: 334 GLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQ 393

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G  P  V+Y+  ++ Y  EG    +  L   M  K I      + ++I    K+ 
Sbjct: 394 YMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRG 453

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            + EA+ +  +M   GV PD +TY+T+I +FC+   L  A +  +QM    LEP +  Y+
Sbjct: 454 MMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYH 513

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA-YTTIIKAHCAEGDVHKAMTFFCQMVE 581
            LI G C++GDL  A  L+  +    I    +  +++II + C EG V  A   F  ++ 
Sbjct: 514 SLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIH 573

Query: 582 KGFEISI 588
            G   +I
Sbjct: 574 IGDRPTI 580



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 186/398 (46%), Gaps = 6/398 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   +++ GM+ +A+ V  +M+   ++  + TY++L+       R  D M      I +
Sbjct: 444 ILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISI 503

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG-PSVVSLNAIMSRYCKLGFAE 115
              P  V  +S+ I G C    L  A   + E   K    P++V  ++I+   C  G   
Sbjct: 504 GLEPNTVVYHSL-IHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVM 562

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            A  +F L++  G  P   ++N LI G C+ G ME+A    + M   G+EPD +TY+ L 
Sbjct: 563 DAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLV 622

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            G+    +I     + +++L K   P  VTY++++ G    G      K+   M+  G  
Sbjct: 623 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTA 682

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           +++  Y +LL  +C++   DEA+ L +++ A+  K D+   + +I  L K  +  +A  L
Sbjct: 683 VDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDL 742

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +  + +  + PN   +G ++  L ++  + EA   F S+  S C     L N +I   ++
Sbjct: 743 FAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQ 802

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
            G+I +A     ++    IS    T + L+  F   GK
Sbjct: 803 KGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 840


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 174/598 (29%), Positives = 289/598 (48%), Gaps = 40/598 (6%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIM-----WDLYDDIKVSE 58
            Y   G  H A+ +  KM  L LK ++ T N+LL  L R+          +++DD+    
Sbjct: 140 AYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIG 199

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGK-EFGPSVVSLNAIMSRYCKLGFAEVA 117
              NV T +++++G C + +L+DA+  L+    + +  P  V+ N I+    K G     
Sbjct: 200 VSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDL 259

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           K L   M K GL P+  +YN L++G C  GS++EA +    M +  V PD  TY+IL  G
Sbjct: 260 KELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILING 319

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                 +    +++  +      PD+VTY  LI G  ++G   E  KL E M + G K N
Sbjct: 320 LCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKAN 379

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            + +++ L  +CK  + +     + E+ +  G  PD+VTY  LI+   K   +  A+++ 
Sbjct: 380 QVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMM 439

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM  K I  N+     IL  LC++  + EA    +S      I D V Y  +I G+ + 
Sbjct: 440 REMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFRE 499

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             + +A++++ ++ + +I+P++ TFNSLI G C +GK   A    D +   GL P   T+
Sbjct: 500 EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ----LLE 472
            + +  YC+EG +++      E    +  P + T  +++ GLCK+   ++A+     L+E
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE 619

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +  V     D +TYNT+I +FCK K L++A+ LL++M    LEP   TYN  I  L  +G
Sbjct: 620 EREV-----DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDG 674

Query: 533 DLKNADCLL-----------------------VSLQEHNISLTKVAYTTIIKAHCAEG 567
            L   D LL                        S  +  ++   +AY+ +I   C+ G
Sbjct: 675 KLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRG 732



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/559 (27%), Positives = 287/559 (51%), Gaps = 8/559 (1%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIM---S 106
           L+ ++ +S  P     + I +     + +   A+   Q+    +  P++++ N ++    
Sbjct: 119 LHPNLHLSPPPSKALFD-IALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV 177

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVE 165
           RY        A+ +F  M+K G+  +  ++N+L++G C+ G +E+AL     M     V 
Sbjct: 178 RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVN 237

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           PD +TY+ + K      ++S   +++  +   G  P+ VTY  L+ GYC++G+++E  ++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
            E+M       ++  Y++L++ +C +G + E L L+  M+++ L+PD+VTY+ LI G  +
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQDVV 344
                +A +L  +M +  +  N   H   L  LC++E           L+ M     D+V
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIV 417

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            Y+ +I  Y+K+G++  A+++ R++ +K I  + +T N+++   CK  K+ +A  LL++ 
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G     VTY T +  +  E  +++ L +  EM+   I PT  T+  +I GLC   K 
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           + A++  +++   G+ PD  T+N+II  +CK   + KAF+  N+   H+ +P + T NIL
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           ++GLC  G  + A     +L E    +  V Y T+I A C +  + +A     +M EKG 
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656

Query: 585 EISIRDYTKSFFCMMLSNG 603
           E     Y  SF  +++ +G
Sbjct: 657 EPDRFTYN-SFISLLMEDG 674



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 220/469 (46%), Gaps = 24/469 (5%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK---SGRIDEA 257
           P    + + +  Y   G     L++ + M+    K N++  + LL  + +   S  I  A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK-RISPNSFAHGAILL 316
             +  +M  +G+  ++ T+++L+ G C + K+  A+ +   M S+ +++P++  +  IL 
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
            + +K  +++ +     +  +  + + V YN ++ GY KLG++ EA Q+   + +  + P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            + T+N LI G C  G + +   L+D +K   L+P  VTY T ++   E G       L+
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQ---EAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           ++ME   +    VT+ + +K LCK+ K +     V+ L DM+  G +PD +TY+T+I+++
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH--GFSPDIVTYHTLIKAY 426

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
            K  DL  A +++ +M    ++  + T N ++D LC    L  A  LL S  +    + +
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCM 598
           V Y T+I     E  V KA+  + +M +     ++  +                   F  
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +  +G  PD      +++ + + G +   FE     IK    PD +  N
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCN 595



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 224/489 (45%), Gaps = 57/489 (11%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
           L + Y + G + +A  ++  MK+ ++   + TYN L                        
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNIL------------------------ 316

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
                   I+GLC    +++ +  +      +  P VV+ N ++    +LG +  A+ L 
Sbjct: 317 --------INGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHL 180
             M   G+  +  ++NI +  LC     E       ++   HG  PD +TY  L K +  
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +  +SGA ++++++  KG   + +T   ++   C+   ++E   L      +GF ++ + 
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y  L+    +  ++++AL +  EM+ V + P + T++ LI GLC   K   A++ ++E+ 
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
              + P+     +I+LG C++  + +A  +++  I  +   D    NI+++G  K G   
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A+  +  LIE+R     VT+N++I  FCK+ K+ +A  LL  ++  GLEP   TY +F+
Sbjct: 609 KALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667

Query: 421 NAYCEEGNIQRLLALLQ-------------EMETKAIGPTH----------VTYTVVIKG 457
           +   E+G +     LL+             ++ET+    T           + Y+ VI  
Sbjct: 668 SLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDE 727

Query: 458 LCKQWKLQE 466
           LC + +L+E
Sbjct: 728 LCSRGRLKE 736


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 180/674 (26%), Positives = 304/674 (45%), Gaps = 105/674 (15%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N++T +++I GLC++ R+ DA   L E   +   PSV + NA++  YCK G  + A G+ 
Sbjct: 283 NLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIK 342

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            LM + G +PD ++YN LI+GLC  G ++EA E  N     G  P  IT++ L  G+   
Sbjct: 343 ALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKA 401

Query: 182 SQISGAWKV-----------------------------------IQKLLIKGSDPDIVTY 206
            +I  A +V                                   + ++   G  P++VTY
Sbjct: 402 ERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTY 461

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T +I GYC++G V   L++ ++M  +G   N   Y  L+  + +  ++ +A+ L+ +M+ 
Sbjct: 462 TSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQE 521

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G+ P ++TY+ LI+G CK+ +   A +L+  M    ++P+  A+  +   LC+     E
Sbjct: 522 DGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEE 581

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A   +  L+    +   V Y  ++DG+ K GN   A  L  +++ +     + T++ L+ 
Sbjct: 582 A---YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQ 638

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             CK  K+ +A  +LD + + G++ + V YT  ++   +EG      +L  EM +    P
Sbjct: 639 ALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKP 698

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII----------RSFCKC 496
           +  TYTV I   CK  +++EA  L+ +M   GVTPD +TYN  I          R+F   
Sbjct: 699 SATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTL 758

Query: 497 K-----------------------------------------DLRKAFQLLNQMWLHNLE 515
           K                                         +L   +QLL +M  H L 
Sbjct: 759 KRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLN 818

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           PT  TY+ +I G C    L+ A  LL  +   +IS  +  YT +IK  C      KA++F
Sbjct: 819 PTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSF 878

Query: 576 FCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
              M+E GF+  +  Y                KS FC +L   +  ++   +++     +
Sbjct: 879 VTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLK 938

Query: 621 GGDLGSVFELAAVM 634
            G +    +L A M
Sbjct: 939 AGHVDFCSQLLAAM 952



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 160/584 (27%), Positives = 285/584 (48%), Gaps = 14/584 (2%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           RN Y+ +I+I GLC+   +++A++ +          ++ +   ++   CK G    A+GL
Sbjct: 247 RNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGL 306

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M   G+ P  ++YN +I G C +G M++AL     M ++G  PD  TY+ L  G   
Sbjct: 307 LDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL-C 365

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             ++  A +++   + +G  P ++T+T LI GYC+   +++ L+++  M+S   KL++ A
Sbjct: 366 GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQA 425

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y VL++ + K  R+ EA   L EM A GL P++VTY+ +I G CK   V  A++++  M 
Sbjct: 426 YGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLME 485

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            +   PN++ +G+++ GL + + + +A      +        V+ Y  +I G  K     
Sbjct: 486 HEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFD 545

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A +L+  + +  ++P    +N L    CK+G+  +A   L      G+  + VTYT+ +
Sbjct: 546 NAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLV 602

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + + + GN      L+++M  +       TY+V+++ LCKQ KL EA+ +L+ M V GV 
Sbjct: 603 DGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVK 662

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            + + Y  II    K      A  L N+M     +P++ TY + I   C  G ++ A+ L
Sbjct: 663 CNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHL 722

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---TKSFFC 597
           +  ++   ++   V Y   I      G + +A +   +MV+   E +   Y    K F  
Sbjct: 723 IGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLK 782

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           M L N    D               +L  V++L   M+K GL P
Sbjct: 783 MSLINAHYVDTS-------GMWNWIELNMVWQLLERMMKHGLNP 819



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 176/694 (25%), Positives = 304/694 (43%), Gaps = 72/694 (10%)

Query: 2   LAF---VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMWDLYDDIKVS 57
           LAF   V  R G  H A    A ++ L  + +   Y+ L+ ++   +    D+ + +   
Sbjct: 70  LAFFECVARRPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAI 129

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILF-LQETAGKEFG--------PSVVSLNAIMSRY 108
           +  R V    +V+   C    L+  + F + E  GK +         P  V+ N ++  Y
Sbjct: 130 QAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAY 189

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAF---------------------------------- 134
           CK G   +A   FCL+ + G+  D +                                  
Sbjct: 190 CKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNE 249

Query: 135 -SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
            SY ILI GLC A  + EAL     M   G   +  TY++L KG     +I  A  ++ +
Sbjct: 250 YSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDE 309

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           + ++G  P + TY  +I GYC+ G +++ L ++ +M   G   +   Y+ L+  +C  G+
Sbjct: 310 MPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGK 368

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +DEA  LL    A G  P ++T++ LI G CK +++  A+++ + M S     +  A+G 
Sbjct: 369 LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGV 428

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++  L +K  + EA+   + +  +    +VV Y  +IDGY K+G +G A+++++ +  + 
Sbjct: 429 LINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEG 488

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
             P+  T+ SLIYG  ++ K+  A  L+  ++  G+ P  +TYTT +   C++       
Sbjct: 489 CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 548

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            L + ME   + P    Y V+   LCK  + +EA   L      GV   ++TY +++  F
Sbjct: 549 RLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRK---GVVLTKVTYTSLVDGF 605

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
            K  +   A  L+ +M     +    TY++L+  LC    L  A  +L  +    +    
Sbjct: 606 SKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNI 665

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
           VAYT II     EG                      D+ KS F  M+S+G  P      V
Sbjct: 666 VAYTIIISEMIKEGK--------------------HDHAKSLFNEMISSGHKPSATTYTV 705

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            + ++ + G +     L   M + G+ PD    N
Sbjct: 706 FISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYN 739



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 163/642 (25%), Positives = 272/642 (42%), Gaps = 85/642 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL--RHTDIMWDLYDDIKVSETPRNV 63
           Y ++G + DA+ + A M++        TYNSL+Y L     D   +L +          V
Sbjct: 329 YCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTV 388

Query: 64  YTNSIVIDGLCQQSRLQDAILF-----------------------------------LQE 88
            T + +I+G C+  R+ DA+                                     L E
Sbjct: 389 ITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNE 448

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
                  P+VV+  +I+  YCK+G    A  +F LM   G HP+A++Y  LI+GL     
Sbjct: 449 MFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKK 508

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD------ 202
           + +A+     M   G+ P  ITY+ L +G     +   A+++ + +   G  PD      
Sbjct: 509 LHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNV 568

Query: 203 --------------------------IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
                                      VTYT L+ G+ + GN +    L E M+++G K 
Sbjct: 569 LTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKA 628

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           ++  YSVLL ++CK  +++EAL +L +M   G+K ++V Y+I+I  + K+ K   A  L+
Sbjct: 629 DLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLF 688

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           NEM S    P++  +   +   C+   I EA      +       DVV YNI I+G   +
Sbjct: 689 NEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHM 748

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK----NGKVADARRLLDTIKL------ 406
           G I  A    +++++    P+  T+  L+  F K    N    D   + + I+L      
Sbjct: 749 GYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQL 808

Query: 407 ------HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
                 HGL P+ VTY++ +  +C+   ++    LL  M  K I P    YT++IK  C 
Sbjct: 809 LERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCD 868

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
                +AV  + DM   G  P   +Y+ +I   C   D  +A  L   +   +       
Sbjct: 869 IKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVA 928

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
           + IL DGL   G +     LL ++   +  +   +Y+ +  +
Sbjct: 929 WKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDS 970



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 223/483 (46%), Gaps = 19/483 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N +T   +I GL Q  +L  A+  + +       P V++   ++   CK    + A  LF
Sbjct: 492 NAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 551

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M + GL PD  +YN+L   LC +G  EEA  F   + R GV    +TY+ L  GF   
Sbjct: 552 EMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKA 608

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
                A  +I+K++ +G   D+ TY+VL+   C+   + E L + + M   G K N++AY
Sbjct: 609 GNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAY 668

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++++S M K G+ D A  L  EM + G KP   TY++ I   CK  ++ +A  L  EM  
Sbjct: 669 TIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMER 728

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             ++P+   +   + G      I  A      ++ ++C  +   Y +++  ++K+  I  
Sbjct: 729 DGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINA 788

Query: 362 ----------------AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
                             QL  ++++  ++P++VT++S+I GFCK  ++ +A  LLD + 
Sbjct: 789 HYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHML 848

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
              + P+   YT  +   C+     + ++ + +M      P   +Y  +I GLC +    
Sbjct: 849 GKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYD 908

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
            A  L  D+  +    +++ +  +     K   +    QLL  M   +    S +Y++L 
Sbjct: 909 RAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLT 968

Query: 526 DGL 528
           D +
Sbjct: 969 DSI 971


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/530 (28%), Positives = 265/530 (50%), Gaps = 13/530 (2%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P +V+   +++  C+    + A  +    ++ G  PD  +YN+ I GLC A  +++A + 
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M      P  +TY+ L  G     ++  A  V+++++ KG+ P + TYTV+I G  +
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA----VGLKP 271
            G VEE  ++   ML  G + +   Y+ L+  +CKSG+ +EA  L  E  A        P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR-ISPNSFAHGAILLGLCEKEMITEARMY 330
           D+VTY+ LI GLCK  ++ +A Q++++   +R   P++  + +I+ GLC+   + E    
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           F  +       D V Y  +IDG++K   I +A ++YRQ+++     S VT+N ++ G CK
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G+VA+A      ++  G   + VTY+  M+ +C EGN+   + L + M  +   P  V+
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD-LRKAFQLLNQM 509
           Y ++I+GLC+  KL +A    E +    + PD  T+N  +   C+  D +    +L   M
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESM 424

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
                 P   +Y+IL+DG+C  G L+ A  +   +    ++   V + T+I+  C  G V
Sbjct: 425 VSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRV 484

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
            +A+  F        E+  R    ++    L +G    + + E  L++FH
Sbjct: 485 DEALEVF-------RELERRSAPDAWSYWSLLDGLSRCERMEEARLLSFH 527



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 249/470 (52%), Gaps = 7/470 (1%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T ++ IDGLC+  R+ DA   L++   K+  P+ V+  A++    K G  + A  +   M
Sbjct: 44  TYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQM 103

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G  P   +Y ++I GL  AG +EEA     DM  +G  PDA  Y+ L KG     + 
Sbjct: 104 VEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKP 163

Query: 185 SGAWKVIQKLLIKGSD----PDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQGFKLNVI 239
             A+ + ++   +       PD+VTYT LI G C+ G + E  ++  +  + +GF  + +
Sbjct: 164 EEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAV 223

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ ++  +CK GR++E     +EM   G +PD VTY+ LI G  K   + KA ++Y +M
Sbjct: 224 TYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM 283

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
                  ++  +  IL GLC+   + EA   F ++    C+  VV Y+ ++DG+   GN+
Sbjct: 284 LQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNV 343

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             AV+L+R+++++   P++V++N +I G C+ GK+A A    + +    L P   T+  F
Sbjct: 344 SAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAF 403

Query: 420 MNAYCEE-GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
           ++  C+    +   + L + M ++   P   +Y++++ G+C+   L+ A+++  +M   G
Sbjct: 404 LHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRG 463

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           V PD + +NT+IR  C    + +A ++  ++   +  P + +Y  L+DGL
Sbjct: 464 VAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDGL 512



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/482 (28%), Positives = 239/482 (49%), Gaps = 16/482 (3%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           ++VI+GLC++ RL +A   L+        P  V+ N  +   CK    + A  L   M +
Sbjct: 11  TVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDE 70

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
               P   +Y  L+ GL  AG ++EA+     M   G  P   TY+++  G     ++  
Sbjct: 71  KKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEE 130

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL----NVIAYS 242
           A ++   +L  G  PD   YT LI G C+ G  EE   L +   ++        +V+ Y+
Sbjct: 131 ARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYT 190

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAV--GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
            L+  +CK+GRI EA  + ++ EAV  G  PD VTY+ +I GLCK  +V +  + ++EM 
Sbjct: 191 SLIDGLCKAGRILEARQV-FDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 249

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           ++   P++  + A++ G  + +MI +A   +  ++ S  +   V YNI++DG  K G + 
Sbjct: 250 NRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVA 309

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA----RRLLDTIKLHGLEPSAVTY 416
           EA   +  + E+    ++VT+++L+ GFC  G V+ A    RR+LD     G EP+ V+Y
Sbjct: 310 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLD----RGCEPNLVSY 365

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK-LQEAVQLLEDMY 475
              +   C  G + +     +++  + + P   T+   + GLC++   + + V+L E M 
Sbjct: 366 NIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMV 425

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G +P+  +Y+ ++   C+   L  A ++  +M    + P    +N LI  LC+ G + 
Sbjct: 426 SQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVD 485

Query: 536 NA 537
            A
Sbjct: 486 EA 487



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 236/457 (51%), Gaps = 14/457 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           + G + +A+ V+ +M E     +++TY  ++  L     + +   ++ D+  +    + +
Sbjct: 89  KAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 148

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFG----PSVVSLNAIMSRYCKLGFAEVAKGL 120
             + +I GLC+  + ++A    +E   ++      P VV+  +++   CK G    A+ +
Sbjct: 149 VYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQV 208

Query: 121 FC-LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           F    ++ G  PDA +Y  +I GLC  G +EE  E  ++M   G EPDA+TY+ L  GF 
Sbjct: 209 FDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFM 268

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               I  A +V +++L  G+    VTY +++ G C+ G V E       M  +G    V+
Sbjct: 269 KAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVV 328

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            YS L+   C  G +  A+ L   M   G +P+LV+Y+I+IRGLC+  K+ KA   + ++
Sbjct: 329 TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKL 388

Query: 300 CSKRISPNSFAHGAILLGLCEK-EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
             +R+ P+ +   A L GLC++ + +++    F+S++      ++  Y+I++DG  + G 
Sbjct: 389 LQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGG 448

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +  A++++R+++ + ++P +V FN+LI   C  G+V +A  +   ++     P A +Y +
Sbjct: 449 LEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWS 507

Query: 419 FMN--AYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
            ++  + CE     RLL+    M+ +   P H   TV
Sbjct: 508 LLDGLSRCERMEEARLLSF--HMKLQGCAPRHYDLTV 542



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 154/362 (42%), Gaps = 75/362 (20%)

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SP+  A   ++ GLC ++ + EA    +  + + C  D V YN+ IDG  K   + +A Q
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L +++ EK+  P+ VT+ +L+ G  K G++ +A  +L+ +   G  P+  TYT  ++   
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV---------------- 468
           + G ++    +  +M      P    YT +IKGLCK  K +EA                 
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 469 -----------------------QLLEDMYV-IGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
                                  Q+ +D  V  G  PD +TY +II   CK   + +  +
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 505 LLNQMWLHNLEPTSAT-----------------------------------YNILIDGLC 529
             ++M     EP + T                                   YNI++DGLC
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             G +  A    ++++E     T V Y+ ++   C+EG+V  A+  F +M+++G E ++ 
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363

Query: 590 DY 591
            Y
Sbjct: 364 SY 365



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 125/282 (44%), Gaps = 5/282 (1%)

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           C  D+V + ++I+G  +   + EA  +  + +     P  VT+N  I G CK  +V DA 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           +LL  +      P+ VTYT  ++   + G +   +A+L++M  K   PT  TYTVVI GL
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE--- 515
            K  +++EA ++  DM   G  PD   Y  +I+  CK     +A+ L  +          
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 516 -PTSATYNILIDGLCVNGDLKNADCLLVSLQ-EHNISLTKVAYTTIIKAHCAEGDVHKAM 573
            P   TY  LIDGLC  G +  A  +      E       V YT+II   C  G V +  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
             F +M  +G+E     Y       M +   P    +   ML
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQML 284


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 163/607 (26%), Positives = 277/607 (45%), Gaps = 16/607 (2%)

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           S+   N  T SI+I   C+  RL+             +  +V+ ++ ++   C     + 
Sbjct: 84  SKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDE 143

Query: 117 AKGLFCL-MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
           A  +  L M ++G  PD  +YN +I+G    G +E+A     +M   G+ P+ +TY+ + 
Sbjct: 144 ATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVI 203

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            G      +  A  V Q+++ +G  PD  TY  LI GY   G  +E +++ E M + G +
Sbjct: 204 DGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLE 263

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            + I Y++LL  +CK+GR  EA      M   G+KPD+  Y+IL+ G   +  + +    
Sbjct: 264 PDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSF 323

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
            + M    +SPN      +     +K MI EA   F+ +       DVV +  +ID   K
Sbjct: 324 LDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCK 383

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           LG + +AV  + Q+I + ++P+I  F+SL+YG C  GK   A  L   +   G+   AV 
Sbjct: 384 LGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVF 443

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           + T M   C EG +     L+  M    + P  ++Y  ++ G C   ++ EA +LL+ M 
Sbjct: 444 FNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMV 503

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G+ P++ TY  ++R +CK + +  A+ L  +M +  + P  ATYN ++ GL   G   
Sbjct: 504 SNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFS 563

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISI 588
            A+ L +++           Y  I+   C    V +A   F ++  K        F I I
Sbjct: 564 EANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMI 623

Query: 589 --------RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                   ++     F  + + G  PD     ++     + G LG    L + M KSG  
Sbjct: 624 GALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTA 683

Query: 641 PDKFLIN 647
           P+  ++N
Sbjct: 684 PNSHMLN 690



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 152/598 (25%), Positives = 277/598 (46%), Gaps = 46/598 (7%)

Query: 44  TDIMWDLYDDIKVSE--TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSL 101
           TDI+      +++SE   P +V   + VI+G  ++ +++ A     E   +   P+VV+ 
Sbjct: 145 TDILL-----LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTY 199

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
             ++   CK    + AKG+F  M+  G+ PD  +YN LIHG    G  +E ++   +M  
Sbjct: 200 TTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMST 259

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
           HG+EPD ITY++L        +   A      +  KG  PD+  Y +L+ GY   G + E
Sbjct: 260 HGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSE 319

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
                ++M+  G   N   ++++  +  K   I+EA+ +  +M   GL PD+V++  LI 
Sbjct: 320 MHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALID 379

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR-MYFDSLIMSNCI 340
            LCK  +V  A+  +N+M ++ ++PN F   +++ GLC      +A  ++F+ L    C+
Sbjct: 380 ALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICV 439

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            D V +N ++      G + EA +L   +I   + P+++++N+L+ G C  G++ +A +L
Sbjct: 440 -DAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKL 498

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT-------- 452
           LD +  +GL+P+  TYT  +  YC+   +    +L +EM  K + P   TY         
Sbjct: 499 LDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQ 558

Query: 453 ---------------------------VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
                                      +++ GLCK   + EA ++   +       D +T
Sbjct: 559 TGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVT 618

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           +N +I +  K      A  L   +  + L P   TY ++ + L   G L   D L  +++
Sbjct: 619 FNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAME 678

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           +   +        +++     GD+ +A  +  ++ EK F  S+   T S    + S G
Sbjct: 679 KSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNF--SLEASTTSMLISLYSRG 734



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/581 (23%), Positives = 254/581 (43%), Gaps = 38/581 (6%)

Query: 18  VIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           ++ +M E      +  YN+++   +     +  ++L+ ++     P NV T + VIDGLC
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLC 207

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +   +  A    Q+   +   P   + N ++  Y   G  +    +   M  +GL PD  
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCI 267

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +Y +L+  LC  G   EA  F + M R G++PD   Y+IL  G+     +S     +  +
Sbjct: 268 TYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           +  G  P+   + ++ C Y +   +EE + +   M  QG   +V+++  L+ ++CK GR+
Sbjct: 328 VGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRV 387

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D+A+    +M   G+ P++  +S L+ GLC   K  KA +L+ E+  + I  ++     +
Sbjct: 388 DDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTL 447

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           +  LC +  + EA+   D +I      +V+ YN ++ G+   G I EA +L   ++   +
Sbjct: 448 MCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGL 507

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM-------------- 420
            P+  T+  L+ G+CK  +V DA  L   + + G+ P   TY T +              
Sbjct: 508 KPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANE 567

Query: 421 ---------------------NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
                                N  C+   +     + + + +K      VT+ ++I  L 
Sbjct: 568 LYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALL 627

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K  + ++A+ L   +   G+ PD +TY  I  +  +   L +   L + M      P S 
Sbjct: 628 KGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSH 687

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
             N L+  L   GD+  A   L  L E N SL     + +I
Sbjct: 688 MLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLI 728



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 217/465 (46%), Gaps = 3/465 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y  TG   + V ++ +M    L+    TY  LL  L       +    +D +       +
Sbjct: 241 YLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPD 300

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V   +I++ G   +  L +   FL    G    P+    N +   Y K    E A  +F 
Sbjct: 301 VAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFN 360

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + GL PD  S+  LI  LC  G +++A+   N M   GV P+   +S L  G   + 
Sbjct: 361 KMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVG 420

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A ++  ++L +G   D V +  L+C  C  G V E  +L ++M+  G + NVI+Y+
Sbjct: 421 KWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYN 480

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++  C +GRIDEA  LL  M + GLKP+  TY+IL+RG CK  +V  A  L+ EM  K
Sbjct: 481 TLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMK 540

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            ++P    +  IL GL +    +EA   + ++I S    D+  YNI+++G  K   + EA
Sbjct: 541 GVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEA 600

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +++R+L  K      VTFN +I    K G+  DA  L  TI  +GL P  VTY      
Sbjct: 601 FKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAEN 660

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
             EEG++     L   ME     P       +++ L  +  +  A
Sbjct: 661 LIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRA 705



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 126/522 (24%), Positives = 241/522 (46%), Gaps = 5/522 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW----DLYDDIKVSETPRNV 63
           +  +V  A  V  +M +  +K    TYN L++    T   W     + +++       + 
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTG-KWKEVVQMLEEMSTHGLEPDC 266

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T ++++D LC+  R ++A LF      K   P V     ++  Y   G          L
Sbjct: 267 ITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDL 326

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G+ P+   +NI+         +EEA+   N M + G+ PD +++  L      L +
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A     +++ +G  P+I  ++ L+ G C +G  E+  +L   +L QG  ++ + ++ 
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNT 446

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+ ++C  GR+ EA  L+  M  VG++P++++Y+ L+ G C   ++ +A +L + M S  
Sbjct: 447 LMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNG 506

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + PN F +  +L G C+   + +A   F  ++M      V  YN ++ G  + G   EA 
Sbjct: 507 LKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEAN 566

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +LY  +I  R    I T+N ++ G CKN  V +A ++   +     +  +VT+   + A 
Sbjct: 567 ELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGAL 626

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            + G  +  + L   +    + P  VTY ++ + L ++  L E   L   M   G  P+ 
Sbjct: 627 LKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNS 686

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
              N ++R      D+ +A   L ++   N    ++T ++LI
Sbjct: 687 HMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLI 728



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 164/355 (46%), Gaps = 11/355 (3%)

Query: 244 LLSSMCKSGRI--DEALGLLYEMEAVGLKPDLVTYSILI----RGLCKQDKVHKAIQLYN 297
           +++S  +SG +  DEAL L  E+        +  ++ L+    R  C      + + L+ 
Sbjct: 18  VIASRARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSAS-ERVVSLFT 76

Query: 298 EM---CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
            M   CS +++PN+  +  ++   C    +      F  ++ +    +V++ + ++ G  
Sbjct: 77  RMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLC 136

Query: 355 KLGNIGEAVQ-LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
               + EA   L  ++ E    P +V +N++I GF + G+V  A  L   +   G+ P+ 
Sbjct: 137 DAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNV 196

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTYTT ++  C+   + R   + Q+M  + + P + TY  +I G     K +E VQ+LE+
Sbjct: 197 VTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEE 256

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G+ PD ITY  ++   CK    R+A    + M+   ++P  A Y IL+ G    G 
Sbjct: 257 MSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGA 316

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           L      L  +  + +S  +  +  +  A+  +  + +AM  F +M ++G    +
Sbjct: 317 LSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDV 371



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 3/213 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y +   V DA  +  +M    +   + TYN++L+ L  T    +   LY ++  S T  +
Sbjct: 521 YCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCD 580

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           +YT +I+++GLC+ + + +A    +    K+     V+ N ++    K G  E A  LF 
Sbjct: 581 IYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFA 640

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +  YGL PD  +Y ++   L   GS+ E     + M + G  P++   + L +      
Sbjct: 641 TISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRG 700

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            IS A   + KL  K    +  T ++LI  Y +
Sbjct: 701 DISRAGVYLYKLDEKNFSLEASTTSMLISLYSR 733


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 244/487 (50%), Gaps = 1/487 (0%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           S +S N   S+       + A   F  ML     P    +N L+  +            +
Sbjct: 33  SSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLS 92

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           N M   G+ PD  T +IL   F  L+++  A+ V+ K+L  G  PD  T+T LI G C  
Sbjct: 93  NQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVE 152

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G + + L L + M+ +GF+ NV+ Y  L++ +CK G  + A+ LL  ME    +PD+V Y
Sbjct: 153 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 212

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + +I  LCK  +V +A  L+++M  + ISP+ F + +++  LC            + +I 
Sbjct: 213 TSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMIN 272

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           S  + DVV+++ ++D   K G I EA  +   +I + + P++VT+N+L+ G C   ++ +
Sbjct: 273 SKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDE 332

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A ++ DT+  +G  P+ ++Y T +N YC+   + +   L +EM  K + P  VTY  ++ 
Sbjct: 333 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH 392

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
             C   +LQ+A+ L  +M   G  PD  TY  ++   CK   L +A  LL  +   N++P
Sbjct: 393 -XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP 451

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
               Y I+IDG+C  G+L+ A  +  +L    +      YT +I   C  G + +A   F
Sbjct: 452 DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLF 511

Query: 577 CQMVEKG 583
            +M   G
Sbjct: 512 MEMDGNG 518



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 250/514 (48%), Gaps = 1/514 (0%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L DA+            PS V  N +++   K         L   M  +G+ PD ++ NI
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI+  C    +  A      + + G +PD  T++ L +G  +  +I  A  +  K++ +G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P++VTY  LI G C++GN    ++L   M     + +V+ Y+ ++ S+CK  ++ EA 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L  +M   G+ PD+ TY+ LI  LC   +      L N+M + +I P+      ++  L
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++  ITEA    D +I+     +VV YN ++DG+     + EAV+++  ++    +P++
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 349

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           +++N+LI G+CK  ++  A  L + +    L P+ VTY T M+  C  G +Q  +AL  E
Sbjct: 350 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHE 408

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M      P   TY +++  LCK+  L EA+ LL+ +    + PD   Y  +I   C+  +
Sbjct: 409 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L  A  + + +    L P   TY I+I+GLC  G L  A+ L + +  +  S     Y T
Sbjct: 469 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 528

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           I +      +  +A+    +M+ +GF   +   T
Sbjct: 529 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTT 562



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 238/476 (50%), Gaps = 3/476 (0%)

Query: 93  EFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
            FG  P V +LN +++ +C L     A  +   +LK G  PD  ++  LI GLC+ G + 
Sbjct: 97  SFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIG 156

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           +AL   + M   G +P+ +TY  L  G   +   + A ++++ +      PD+V YT +I
Sbjct: 157 DALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSII 216

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
              C+   V E   L   M+ QG   ++  Y+ L+ S+C          LL +M    + 
Sbjct: 217 DSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIM 276

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD+V +S ++  LCK+ K+ +A  + + M  + + PN   + A++ G C +  + EA   
Sbjct: 277 PDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKV 336

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           FD+++ +    +V+ YN +I+GY K+  + +A  L+ ++ +K + P+ VT+N+L++  C 
Sbjct: 337 FDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCH 395

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G++ DA  L   +  HG  P   TY   ++  C++ ++   +ALL+ +E   + P    
Sbjct: 396 VGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQI 455

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           YT+VI G+C+  +L+ A  +  ++   G+ P+  TY  +I   C+   L +A +L  +M 
Sbjct: 456 YTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 515

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +   P   TYN +  GL  N +   A  LL  +     S      T +++  C +
Sbjct: 516 GNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD 571



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/519 (26%), Positives = 255/519 (49%), Gaps = 4/519 (0%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPRNVYTNSIVI 70
           DA+    +M  +    S   +N LL ++  T     ++ L + +     P +VYT +I+I
Sbjct: 52  DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 111

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +  C  +RL  A   L +       P   +   ++   C  G    A  LF  M+  G  
Sbjct: 112 NSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 171

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  +Y  LI+GLC  G+   A+     M +   +PD + Y+ +        Q++ A+ +
Sbjct: 172 PNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNL 231

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
             K++ +G  PDI TYT LI   C +   +    L   M++     +V+ +S ++ ++CK
Sbjct: 232 FSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCK 291

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G+I EA  ++  M   G++P++VTY+ L+ G C Q ++ +A+++++ M     +PN  +
Sbjct: 292 EGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVIS 351

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C+ + + +A   F+ +     I + V YN ++     +G + +A+ L+ +++
Sbjct: 352 YNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMV 410

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
                P + T+  L+   CK   + +A  LL TI+   ++P    YT  ++  C  G ++
Sbjct: 411 AHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELE 470

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               +   + +K + P   TYT++I GLC++  L EA +L  +M   G +PD  TYNTI 
Sbjct: 471 AARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTIT 530

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +   + K+  +A QLL +M         +T  +L++ LC
Sbjct: 531 QGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 569



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 218/455 (47%), Gaps = 2/455 (0%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K+   P +  T + +I GLC + ++ DA+    +  G+ F P+VV+   +++  CK+G 
Sbjct: 131 LKLGHQP-DTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 189

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A  L   M +    PD   Y  +I  LC    + EA    + M   G+ PD  TY+ 
Sbjct: 190 TNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTS 249

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L      L +      ++ +++     PD+V ++ ++   C+ G + E   + ++M+ +G
Sbjct: 250 LIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRG 309

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            + NV+ Y+ L+   C    +DEA+ +   M   G  P++++Y+ LI G CK  ++ KA 
Sbjct: 310 VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKAT 369

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            L+ EMC K + PN+  +   L+  C    + +A   F  ++    I D+  Y I++D  
Sbjct: 370 YLFEEMCQKELIPNTVTYNT-LMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYL 428

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K  ++ EA+ L + +    + P I  +  +I G C+ G++  AR +   +   GL P+ 
Sbjct: 429 CKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNV 488

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            TYT  +N  C  G +     L  EM+     P   TY  + +GL +  +   A+QLL++
Sbjct: 489 RTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQE 548

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           M   G + D  T   ++   C  K  +   Q+L++
Sbjct: 549 MLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 583



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 208/476 (43%), Gaps = 49/476 (10%)

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
            + +  A     ++L     P  V +  L+    +         L   M S G   +V  
Sbjct: 47  FNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYT 106

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
            ++L++S C   R+  A  +L ++  +G +PD  T++ LIRGLC + K+  A+ L+++M 
Sbjct: 107 LNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMI 166

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            +   PN   +G ++ GLC+      A     S+   NC  DVV+Y  +ID   K   + 
Sbjct: 167 GEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 226

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  L+ +++ + ISP I T+ SLI+  C   +      LL+ +    + P  V ++T +
Sbjct: 227 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVV 286

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +A C+EG I     ++  M  + + P  VTY  ++ G C Q ++ EAV++ + M   G  
Sbjct: 287 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 346

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN------------------ 522
           P+ I+YNT+I  +CK + + KA  L  +M    L P + TYN                  
Sbjct: 347 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALF 406

Query: 523 ----------------ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
                           IL+D LC    L  A  LL +++  N+      YT +I   C  
Sbjct: 407 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 466

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPD 607
           G++  A   F  +  KG   ++R YT                  F  M  NG  PD
Sbjct: 467 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPD 522



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/397 (23%), Positives = 196/397 (49%), Gaps = 4/397 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G  + A+ ++  M++ + +  +  Y S++ +L   R     ++L+  +       +++
Sbjct: 186 KVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIF 245

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I  LC     +     L +    +  P VV  + ++   CK G    A  +  +M
Sbjct: 246 TYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMM 305

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G+ P+  +YN L+ G C+   M+EA++  + M  +G  P+ I+Y+ L  G+  + ++
Sbjct: 306 IIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRM 365

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  + +++  K   P+ VTY  L+   C +G +++ + L   M++ G   ++  Y +L
Sbjct: 366 DKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALFHEMVAHGQIPDLATYRIL 424

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L  +CK   +DEA+ LL  +E   + PD+  Y+I+I G+C+  ++  A  +++ + SK +
Sbjct: 425 LDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGL 484

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   +  ++ GLC + ++ EA   F  +  + C  D   YN +  G ++      A+Q
Sbjct: 485 RPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQ 544

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           L ++++ +  S  + T   L+   C +      +++L
Sbjct: 545 LLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 581


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 178/694 (25%), Positives = 332/694 (47%), Gaps = 49/694 (7%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVS 57
           ++A  Y R G V  AV  + +M+ + L+V++  Y++++     +  T+    + + ++  
Sbjct: 223 IMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRK 282

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVV---SLNAIMSRYCKLGFA 114
               NV T ++++ G C+  R+++A   ++E   KE G  VV   +   +++ YC+ G  
Sbjct: 283 GLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM--KETGDIVVDEVAYGMMINGYCQRGRM 340

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           + A  +   M   G+H + F YN +I+GLC  G MEE  +   +M   G+ PD  +Y+ L
Sbjct: 341 DDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTL 400

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G+     +  A+++ + ++  G     +TY  L+ G+C +  +++ L+L  +ML +G 
Sbjct: 401 IDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGV 460

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             N I+ S LL  + K+G+ ++AL L  E  A GL  +++T++ +I GLCK  ++ +A +
Sbjct: 461 APNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEE 520

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L + M   R  P+S  +  +  G C+   +  A    + +        V ++N  I G+ 
Sbjct: 521 LLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHF 580

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
                 +   ++ ++  + +SP++VT+ +LI G+CK G + +A  L   +  +G+ P+  
Sbjct: 581 IAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVF 640

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEM-----------------------ETKAIGPTH--- 448
             +  M+ + +EG +     +LQ++                       +T A G  H   
Sbjct: 641 ICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSAN 700

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           V + V+I GLCK  ++ +A  L E +      PD  TY+++I        + +AF L + 
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    L P   TYN LI GLC +G L  A  L   LQ   IS   + Y T+I  +C EG 
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEV 613
             +A     +MVE+G + ++  Y+   + +               M+ N   P+      
Sbjct: 821 TTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCT 880

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           ++  + + G++  + +L   M   GLLP  ++ N
Sbjct: 881 LIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 914



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 161/655 (24%), Positives = 311/655 (47%), Gaps = 51/655 (7%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVS 57
           +L   ++  G +  A+ V   M ++  + S+++ N LL  L  +    +   +Y  ++++
Sbjct: 153 LLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIA 212

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               + +T +I+    C+  R+  A+ F++E  G     ++V+ +A+M  YC +G+ E A
Sbjct: 213 GVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDA 272

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + +   + + GL P+  +Y +L+ G C  G MEEA     +M   G   D +        
Sbjct: 273 RRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG---DIVV------- 322

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                                   D V Y ++I GYCQ G +++  ++R  M   G  +N
Sbjct: 323 ------------------------DEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVN 358

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +  Y+ +++ +CK GR++E   +L EME VG++PD  +Y+ LI G C++  + KA ++  
Sbjct: 359 LFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCR 418

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEA-RMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            M    ++  +  +  +L G C    I +A R++F  ++      + +  + ++DG  K 
Sbjct: 419 MMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF-LMLKRGVAPNEISCSTLLDGLFKA 477

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   +A+ L+++ + + ++ +++TFN++I G CK G++A+A  LLD +K     P ++TY
Sbjct: 478 GKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTY 537

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG--LCKQWKLQEAVQLLEDM 474
            T  + YC+ G +     L+ +ME     P+   +   I G  + KQW   +   +  +M
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW--HKVNDIHSEM 595

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G++P+ +TY  +I  +CK  +L +A  L  +M  + + P     + L+      G +
Sbjct: 596 SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKV 655

Query: 535 KNADCLLVSLQEHN------ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
             A+ +L  L   +      IS  ++   + +    A+G+ H A   +  ++  G   S 
Sbjct: 656 DEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMW-NVIIFGLCKSG 714

Query: 589 R-DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           R    KS F  + +  F PD      ++      G +   F L  VM+ +GL P+
Sbjct: 715 RIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 259/526 (49%), Gaps = 7/526 (1%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           ++F  S VS + ++  +   G    A  +F  M K G  P   S N L++ L  +G    
Sbjct: 142 RDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGM 201

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A      M   GV PD  T +I+AK +    +++ A + ++++   G + ++V Y  ++ 
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG-LK 270
            YC +G  E+  ++ E +  +G   NV+ Y++L+   CK GR++EA  ++ EM+  G + 
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
            D V Y ++I G C++ ++  A ++ NEM    I  N F +  ++ GLC+   + E +  
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
              +       D   YN +IDGY + G++ +A ++ R ++   ++ + +T+N+L+ GFC 
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
              + DA RL   +   G+ P+ ++ +T ++   + G  ++ L L +E   + +    +T
Sbjct: 442 LHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVIT 501

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           +  VI GLCK  ++ EA +LL+ M  +   PD +TY T+   +CK   L  A  L+N+M 
Sbjct: 502 FNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKME 561

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
                P+   +N  I G  +       + +   +    +S   V Y  +I   C EG++H
Sbjct: 562 HLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLH 621

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
           +A   + +MV  G   ++      F C  L + F  + ++ E  L+
Sbjct: 622 EACNLYFEMVNNGMNPNV------FICSALMSCFYKEGKVDEANLV 661



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/435 (23%), Positives = 193/435 (44%), Gaps = 32/435 (7%)

Query: 243 VLLSSMCKSGRIDEALGL-LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC- 300
            LL +  +  R+D    L L+ +     +P LV+++ L+  L +  + H A  L + +  
Sbjct: 71  ALLQAALRRVRLDPDAALHLFRLAPS--RPSLVSHAQLLHILARARRFHDARALLSSLPP 128

Query: 301 -SKRISPN------SFAHGAILLGL-----CEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
            ++ + P+       F   A+   L      +   ++ A   FD +    C   +   N 
Sbjct: 129 HAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNR 188

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +++  V+ G+ G A  +Y Q+    + P   T   +   +C++G+VA A   ++ ++  G
Sbjct: 189 LLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           LE + V Y   M+ YC  G  +    +L+ ++ K + P  VTYT+++KG CK  +++EA 
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308

Query: 469 QLLEDMYVIG-VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           +++++M   G +  D++ Y  +I  +C+   +  A ++ N+M    +      YN +I+G
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC  G ++    +L  +++  +   K +Y T+I  +C EG + KA      MV  G   +
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428

Query: 588 IRDYTKSF--FC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
              Y      FC             +ML  G  P++  C  +L    + G       L  
Sbjct: 429 TLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWK 488

Query: 633 VMIKSGLLPDKFLIN 647
             +  GL  +    N
Sbjct: 489 ETLARGLAKNVITFN 503


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/521 (28%), Positives = 249/521 (47%), Gaps = 32/521 (6%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+  S + ++         +VA  +F  ML  G+ P  F++ I++  LC+   ++ A   
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSL 240

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             DM +HG  P++I Y  L       +Q+S A K+++++ + G  PD+ T+  +I G C+
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK 300

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE------------ 263
           +  + +  KL + ML +GF  + + Y  LL  +C+ G+++EA  +L +            
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTL 360

Query: 264 --------------------MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
                               M   G +PD+ TY+IL+ GLCK+  +  A  L NEM  + 
Sbjct: 361 INGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG 420

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN   +  ++ GLC+  ++ EA +    +       + V+YN +I    +   +  A+
Sbjct: 421 CEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVAL 480

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L  ++  K   P + T+NSLIYG CK  ++ +A RL   + L G   + VTY T ++A 
Sbjct: 481 NLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHAL 540

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
              G  Q+ L L+ +M  +      +TY  +IK  CK   +++ ++L E M + G+  D 
Sbjct: 541 LRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADT 600

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           I+ N +I   CK   +  AF+ L         P   TYN +++GLC  G +K A  L   
Sbjct: 601 ISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDR 660

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           LQ   +      Y T I   C EG V+ A +FF + +E GF
Sbjct: 661 LQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGF 701



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 236/489 (48%), Gaps = 38/489 (7%)

Query: 59  TPRNVYTNSIV----IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           T      NSIV    I  L Q++++ +A+  L+E       P V + N ++   CK+   
Sbjct: 245 TKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKI 304

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLC------------------------------ 144
             A  L   ML  G +PD  +Y  L+HGLC                              
Sbjct: 305 HDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGY 364

Query: 145 -IAGSMEEALEFTND-MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
            ++G ++EA  F N+ M   G +PD  TY+IL  G      +S A  ++ ++  +G +P+
Sbjct: 365 VMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPN 424

Query: 203 IVTYTVLICGYCQIGNVEE-GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           ++TY +L+ G C+ G +EE GL L E M ++G  +N + Y+ L+ ++C+  ++  AL LL
Sbjct: 425 VITYAILVNGLCKAGLLEEAGLVLHE-MSARGLTINSVIYNCLICALCRKEKVHVALNLL 483

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            EM   G KPDL TY+ LI GLCK D++ +A +L++ M       N+  +  ++  L  +
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRR 543

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
               +A    + ++   C  D + YN +I  + K+GNI + ++LY Q+I   +    ++ 
Sbjct: 544 GAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISC 603

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N +I G CK GKV +A   L      G  P  VTY + +N  C+ G I+  L L   ++ 
Sbjct: 604 NIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQV 663

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           + + P   TY   I   CK+  + +A          G  P  +T+N ++ +  K  +   
Sbjct: 664 EGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQEN 723

Query: 502 AFQLLNQMW 510
            F +L+++W
Sbjct: 724 NFFVLDELW 732



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 236/499 (47%), Gaps = 26/499 (5%)

Query: 146 AGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
           AG   +A+    DM   +  EP   +Y ++ +     +    A  V   +L KG  P + 
Sbjct: 160 AGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVF 219

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           T+ +++   C    V+    L   M   G   N I Y  L+ ++ +  ++ EAL LL EM
Sbjct: 220 TFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM 279

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
             +G  PD+ T++ +I GLCK +K+H A +L + M  +   P++  +G +L GLC    +
Sbjct: 280 FVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKL 339

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ-LYRQLIEKRISPSIVTFNS 383
            EAR     LI   C  + +L N +I+GYV  G + EA   L   +I     P I T+N 
Sbjct: 340 NEARKI---LIKIPCPNNAIL-NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNI 395

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L++G CK G ++ AR L++ +   G EP+ +TY   +N  C+ G ++    +L EM  + 
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           +    V Y  +I  LC++ K+  A+ LL +M   G  PD  TYN++I   CK   + +AF
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           +L + M L      + TYN LI  L   G  + A  L+  +     +L K+ Y  +IKA 
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           C  G++ K +  + QM+                     +G   D   C +M+    + G 
Sbjct: 576 CKVGNIEKGLELYEQMI--------------------MDGLGADTISCNIMINGLCKVGK 615

Query: 624 LGSVFELAAVMIKSGLLPD 642
           + + FE     I  G +PD
Sbjct: 616 VDNAFEFLRDAINRGFVPD 634



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 237/473 (50%), Gaps = 8/473 (1%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNV 63
           S+   V +A+ ++ +M  +     +QT+N +++ L   + + D   L D + +     + 
Sbjct: 264 SQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDN 323

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEVAKGLFC 122
            T   ++ GLC+  +L +A   L +       P+   LN +++ Y   G   E    L  
Sbjct: 324 MTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQLKEAQSFLNE 379

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+ +G  PD F+YNIL+HGLC  GS+  A +  N+M R G EP+ ITY+IL  G     
Sbjct: 380 TMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAG 439

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A  V+ ++  +G   + V Y  LIC  C+   V   L L   M ++G K ++  Y+
Sbjct: 440 LLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYN 499

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +CK  RIDEA  L + M   G   + VTY+ LI  L ++    KA+ L N+M  +
Sbjct: 500 SLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFR 559

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             + +   +  ++   C+   I +    ++ +IM     D +  NIMI+G  K+G +  A
Sbjct: 560 GCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNA 619

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +  R  I +   P IVT+NS++ G CK G++ +A  L D +++ G+ P A TY TF++ 
Sbjct: 620 FEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISW 679

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
            C+EG +    +           P+++T+ V++  L KQ   +    +L++++
Sbjct: 680 QCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDELW 732



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 177/389 (45%), Gaps = 6/389 (1%)

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y V I     IG  +   KL   M  +G       + +++    K+G+  +A+ LL +M 
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMR 174

Query: 266 AVGL-KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           AV L +P   +Y +++  L   +    A  ++ +M SK +SP  F  G ++  LC    +
Sbjct: 175 AVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEV 234

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
             A      +    C+ + ++Y  +I    +   + EA++L  ++      P + TFN +
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I+G CK  K+ DA +L+D + L G  P  +TY   ++  C  G +     +L     K  
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL----IKIP 350

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLL-EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
            P +     +I G     +L+EA   L E M   G  PD  TYN ++   CK   L  A 
Sbjct: 351 CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFAR 410

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L+N+M     EP   TY IL++GLC  G L+ A  +L  +    +++  V Y  +I A 
Sbjct: 411 DLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICAL 470

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           C +  VH A+    +M  KG +  +  Y 
Sbjct: 471 CRKEKVHVALNLLSEMCTKGCKPDLFTYN 499


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 171/642 (26%), Positives = 300/642 (46%), Gaps = 58/642 (9%)

Query: 52  DDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
           + +K S  P NV     ++ GLC+  R+Q+A+               V+   ++  +C++
Sbjct: 227 EGVKASAVPYNV-----LMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
              E+A  +   M++ G  P   + + +I  L     +EEA      +G  G+ P+   Y
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + L        +   A ++ +++  +G +P+ VTY +LI   C+ G +E+ L L + M  
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +G K+ V  Y+ L++  CK G +D A GLL  M   GL P   +YS LI GLC+   +  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
            ++L+ EM  + I+ N++   A++ G C+ + + EA   FD +I SN I + V +N+MI+
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI-------------------------- 385
           GY  +GNI +A QLY Q++E  + P   T+ SLI                          
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVL 581

Query: 386 ---------YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
                    YGF + G+  +   L D + + G++   V++T  + A  ++ + ++   L 
Sbjct: 582 NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 641

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           +EM+ + + P  + YT +I  L K+  + +A+   + M V G +P+ +T+  +I + CK 
Sbjct: 642 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKS 701

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA-DCLLVSLQEHNISLTKVA 555
             L  A  L  +M   N+ P   TYN  +D     GD++ A D     LQ H  S+  V+
Sbjct: 702 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASI--VS 759

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFE-------------ISIRDYTKSF--FCMML 600
           +  +IK  C  G + +A+    ++ E GF                + D  K+F  +  ML
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             G  PD     + +   +  G+      +   MI+SG+ P+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 861



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 265/530 (50%), Gaps = 4/530 (0%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNS 67
           +V +A  +  K+ +L +  ++  YN+L+  L   +   D   L+ ++       N  T +
Sbjct: 318 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 377

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I+I  LC++  ++DA+    +   K    +V   N++++ YCK G  + A+GL   M+K 
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           GL P A SY+ LI GLC  G +   +E   +M   G+  +  T++ L  GF    ++  A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++  K++     P+ VT+ V+I GYC +GN+ +  +L + M+  G K +   Y  L+S 
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C +  + +A   + ++E      +  + + L+ G  ++ +  +   L++EM  + +  +
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 617

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
             +   I+    ++    ++ + F  +       D + Y  MID   K  N+ +A+  + 
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 677

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           Q++    SP+ VT   LI   CK+G +  A  L   +    + P+  TY  F++ +  EG
Sbjct: 678 QMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEG 737

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           ++++   L   M    +    V++ ++IKGLCK  K+QEA+ L+  +   G +PD I+Y+
Sbjct: 738 DMEKAKDLHSAMLQGHLASI-VSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYS 796

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           TII   CK  D+ KAF+L N+M    L+P    YNI I    V+G+   A
Sbjct: 797 TIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKA 846



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 160/643 (24%), Positives = 288/643 (44%), Gaps = 28/643 (4%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY----NLRHTDIMWDLYDDIKVSETP 60
            Y  +  +  A  ++ +M+   +K S   YN L+Y    N+R  + +      + +  T 
Sbjct: 207 AYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTA 266

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
             V   ++V  G C+   L+ A+    +     F PS  + + ++    K    E A  L
Sbjct: 267 DEVTYRTLVY-GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL 325

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
            C +   G+ P+ F+YN LI  LC     ++A     +M   G+EP+ +TY+IL      
Sbjct: 326 ACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK 385

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              I  A  +  K+  KG    +  Y  LI GYC+ G+++    L   M+ +G      +
Sbjct: 386 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 445

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS L++ +C++G +   + L  EM   G+  +  T++ LI G CK  K+ +A +L+++M 
Sbjct: 446 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
              + PN      ++ G C    I +A   +D ++      D   Y  +I G      + 
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A +    L       +  +  +L+YGF + G+  +   L D + + G++   V++T  +
Sbjct: 566 KANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 625

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
            A  ++ + ++   L +EM+ + + P  + YT +I  L K+  + +A+   + M V G +
Sbjct: 626 YAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYS 685

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA-DC 539
           P+ +T+  +I + CK   L  A  L  +M   N+ P   TYN  +D     GD++ A D 
Sbjct: 686 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL 745

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
               LQ H  S+  V++  +IK  C  G + +A+    ++ E GF      Y+       
Sbjct: 746 HSAMLQGHLASI--VSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII---- 799

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                    E+C++        GD+   FEL   M+  GL PD
Sbjct: 800 --------HELCKM--------GDINKAFELWNEMLYKGLKPD 826



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 151/575 (26%), Positives = 268/575 (46%), Gaps = 50/575 (8%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           L L  G+  + ++ + ++  L        A +  + M + GV  D   Y+   + +    
Sbjct: 153 LSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR 212

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            + GA  ++ ++  +G     V Y VL+ G C+   V+E ++++ VM++ G   + + Y 
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 272

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C+   ++ AL + ++M  +G  P     S +I  L K++ V +A  L  ++   
Sbjct: 273 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 332

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN FA+ A++  LC+ E   +A   F  +       + V Y I+I    K G I +A
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + L+ ++ +K I  ++  +NSLI G+CK G +  AR LL  +   GL P+A +Y+  +  
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C  G++   + L +EM  + I   + T+T +I G CK  K+ EA +L + M    V P+
Sbjct: 453 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           ++T+N +I  +C   ++RKAFQL +QM    L+P + TY  LI GLC+   +  A+  + 
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572

Query: 543 SLQE-----HNISLTK------------------------------VAYTTIIKAHCAEG 567
            L+      +N SLT                               V++T I+ A   + 
Sbjct: 573 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT-------------KSFFC--MMLSNGFPPDQEICE 612
           D  K+   F +M E+G +     YT             ++  C   M+ +G+ P+     
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHT 692

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           V++    + G LGS   L   M+   +LP+KF  N
Sbjct: 693 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 249/490 (50%), Gaps = 12/490 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETP 60
           + GM+ DA+ +  KM++  +KV++  YNSL+          R   ++  +   +K   TP
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM---VKEGLTP 441

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
               + S +I GLC+   L   +   +E A +    +  +  A+++ +CK    + A  L
Sbjct: 442 -TAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M+   + P+  ++N++I G C+ G++ +A +  + M   G++PD  TY  L  G  L
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
            S +S A + +  L    +  +  + T L+ G+ + G   E   L + M  +G KL++++
Sbjct: 561 TSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVS 620

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           +++++ +  K    +++  L  EM+  G+KPD + Y+ +I  L K++ + +A+  +++M 
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 680

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
               SPN+  H  ++  LC+   +  A +    ++  N + +   YN  +D +   G++ 
Sbjct: 681 VDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 740

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  L+  +++  ++ SIV+FN LI G CK GK+ +A  L+  I   G  P  ++Y+T +
Sbjct: 741 KAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 799

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C+ G+I +   L  EM  K + P  V Y + I+      +  +A+ +  +M   GV 
Sbjct: 800 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQ 859

Query: 481 PDQITYNTII 490
           P+  TY  ++
Sbjct: 860 PNWDTYRALL 869



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 1/271 (0%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           + L+D++ V     ++ + +I++    +Q   + + +  +E   +   P  +    ++  
Sbjct: 603 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 662

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
             K      A   +  M+  G  P+  ++ +LI+ LC +G +  A     +M    V P+
Sbjct: 663 LSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 722

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
             TY+     F     +  A K +   +++G    IV++ +LI G C+ G ++E + L  
Sbjct: 723 KFTYNCFLDYFATEGDMEKA-KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMS 781

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            +   GF  + I+YS ++  +CK G I++A  L  EM   GLKPD+V Y+I IR      
Sbjct: 782 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHG 841

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
           +  KA+ +Y  M    + PN   + A+L G+
Sbjct: 842 ESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 61/115 (53%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+I GLC+  ++Q+AI  + +     F P  +S + I+   CK+G    A  L+  ML 
Sbjct: 761 NILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 820

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            GL PD  +YNI I    + G  ++AL    +M R GV+P+  TY  L  G  L+
Sbjct: 821 KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 875



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 2/98 (2%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL   I  S    +  + S +I  LC+   +  A     E   K   P VV+ N I  R+
Sbjct: 778 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYN-IFIRW 836

Query: 109 CKL-GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
           C + G ++ A G++  M++ G+ P+  +Y  L+ G+ +
Sbjct: 837 CNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 268/529 (50%), Gaps = 2/529 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   + VIDG  ++  +  A    +E   +   P +V+ N+++   CK    + A+   
Sbjct: 231 NVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFL 290

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+   + P+ ++YN LI+G    G  +EA+    +M RH + PD +T S+L       
Sbjct: 291 RQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKY 350

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  V   + +KG +PD+ +Y +++ GY   G + +   L ++ML  G   +   +
Sbjct: 351 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 410

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+ +    G +D+A+ +  EM   G+KPD+VTY  +I  LC+  K+  A++ +N+M  
Sbjct: 411 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 470

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIG 360
           + ++P+ +A+  ++ G C    + +A+    S IM+N +  D+V ++ +I+   KLG + 
Sbjct: 471 QGVAPDKYAYNCLIQGFCTHGSLLKAKELI-SEIMNNGMHLDIVFFSSIINNLCKLGRVM 529

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  ++   +   + P  V ++ L+ G+C  GK+  A R+ D +   G+EP+ V Y T +
Sbjct: 530 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 589

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YC+ G I   L+L +EM  + I P+ + Y+++I GL +  +   A     +M   G+ 
Sbjct: 590 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIA 649

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            D  TYN ++R   K +   +A  L  ++   N++    T N +IDG+     ++ A  L
Sbjct: 650 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 709

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             S+    +    V Y+ +I     EG V +A   F  M   G E + R
Sbjct: 710 FASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 758



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/518 (26%), Positives = 254/518 (49%), Gaps = 16/518 (3%)

Query: 82  AILFLQETAGKEFGPSVVSLN----AIMSRYC-KLGFAEVAKGLFCLMLKYGLHPDAFSY 136
           A+      A +  GP V+S      AI+   C +    E+A   F  +L+ GL  +    
Sbjct: 103 AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 162

Query: 137 NILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           N L+ G C A   +EAL+   +     G  PD  +YSIL K      + SG    + +++
Sbjct: 163 NHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGK-SGQADDLLRMM 221

Query: 196 IKGS---DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
            +G     P++V Y  +I G+ + G+V +   L + M+ +G   +++ Y+ ++ ++CK+ 
Sbjct: 222 AEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKAR 281

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            +D+A   L +M    + P+  TY+ LI G     +  +A++++ EM    I P+     
Sbjct: 282 AMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 341

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC+   I EAR  FD++ M     DV  YNIM++GY   G + +   L+  ++  
Sbjct: 342 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 401

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            I+P   TFN LI  +   G +  A  + + ++ HG++P  VTY T + A C  G +   
Sbjct: 402 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 461

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           +    +M  + + P    Y  +I+G C    L +A +L+ ++   G+  D + +++II +
Sbjct: 462 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 521

Query: 493 FCK---CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
            CK     D +  F L   + LH   P +  Y++L+DG C+ G ++ A  +  ++    I
Sbjct: 522 LCKLGRVMDAQNIFDLTVNVGLH---PDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 578

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
               V Y T++  +C  G + + ++ F +M+++G + S
Sbjct: 579 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPS 616



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/574 (22%), Positives = 270/574 (47%), Gaps = 3/574 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + + G V+ A  +  +M +  +   + TYNS+++ L   R  D        +       N
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 301

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T + +I G     + ++A+   +E       P VV+L+ +M   CK G  + A+ +F 
Sbjct: 302 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 361

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G +PD FSYNI+++G    G + +  +  + M   G+ PD  T+++L K +    
Sbjct: 362 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 421

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A  +  ++   G  PD+VTY  +I   C+IG +++ ++    M+ QG   +  AY+
Sbjct: 422 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 481

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C  G + +A  L+ E+   G+  D+V +S +I  LCK  +V  A  +++   + 
Sbjct: 482 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 541

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P++  +  ++ G C    + +A   FD+++ +    +VV+Y  +++GY K+G I E 
Sbjct: 542 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 601

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + L+R+++++ I PS + ++ +I G  + G+   A+     +   G+     TY   +  
Sbjct: 602 LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRG 661

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
             +       + L +E+    +    +T   +I G+ +  +++EA  L   +    + P+
Sbjct: 662 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPN 721

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TY+ +I +  K   + +A  + + M     EP S   N ++  L    ++  A   L 
Sbjct: 722 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLS 781

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            + E N SL  +    ++    ++G   + + F 
Sbjct: 782 KIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/604 (21%), Positives = 277/604 (45%), Gaps = 18/604 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           N+   + +++G C+  R  +A+ + L  T      P V S + ++   C  G +  A  L
Sbjct: 158 NIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 217

Query: 121 FCLMLKYGL--HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             +M + G    P+  +YN +I G    G + +A +   +M + G+ PD +TY+ +    
Sbjct: 218 LRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHAL 277

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +  A   +++++ K   P+  TY  LI GY   G  +E +++ + M       +V
Sbjct: 278 CKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDV 337

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           +  S+L+ S+CK G+I EA  +   M   G  PD+ +Y+I++ G   +  +     L++ 
Sbjct: 338 VTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDL 397

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M    I+P+ +    ++       M+ +A + F+ +       DVV Y  +I    ++G 
Sbjct: 398 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 457

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + +A++ + Q+I++ ++P    +N LI GFC +G +  A+ L+  I  +G+    V +++
Sbjct: 458 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 517

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +N  C+ G +     +        + P  V Y++++ G C   K+++A+++ + M   G
Sbjct: 518 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 577

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           + P+ + Y T++  +CK   + +   L  +M    ++P++  Y+I+IDGL   G    A 
Sbjct: 578 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 637

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ---------------MVEKG 583
                + E  I++    Y  +++         +A+  F +               M++  
Sbjct: 638 MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 697

Query: 584 FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           F+    +  K  F  +  +   P+     +M+    + G +    ++ + M  +G  P+ 
Sbjct: 698 FQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 757

Query: 644 FLIN 647
            L+N
Sbjct: 758 RLLN 761



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 232/469 (49%), Gaps = 3/469 (0%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSE 58
           L + YS TG   +AV V  +M+   +   + T + L+ +L ++  I    D++D + +  
Sbjct: 308 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 367

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +V++ +I+++G   +  L D         G    P   + N ++  Y   G  + A 
Sbjct: 368 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 427

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M  +G+ PD  +Y  +I  LC  G M++A+E  N M   GV PD   Y+ L +GF
Sbjct: 428 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 487

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +  A ++I +++  G   DIV ++ +I   C++G V +   + ++ ++ G   + 
Sbjct: 488 CTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 547

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + YS+L+   C  G++++AL +   M + G++P++V Y  L+ G CK  ++ + + L+ E
Sbjct: 548 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFRE 607

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  + I P++  +  I+ GL +      A+M F  +  S    D+  YNI++ G  K   
Sbjct: 608 MLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRC 667

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             EA+ L+++L    +  +I+T N++I G  +  +V +A+ L  +I    L P+ VTY+ 
Sbjct: 668 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSI 727

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
            +    +EG ++    +   M+     P       V++ L K+ ++  A
Sbjct: 728 MITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 776



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 213/498 (42%), Gaps = 53/498 (10%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG- 259
           P   TY +L+    +    E  L     +L  G ++N+I  + LL   C++ R DEAL  
Sbjct: 122 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 181

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDK------------------------------- 288
           LL+    +G  PD+ +YSIL++ LC Q K                               
Sbjct: 182 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 241

Query: 289 ------VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
                 V+KA  L+ EM  + I P+   + +++  LC+   + +A  +   ++    + +
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 301

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
              YN +I GY   G   EAV++++++    I P +VT + L+   CK GK+ +AR + D
Sbjct: 302 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 361

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
           T+ + G  P   +Y   +N Y  +G +  +  L   M    I P   T+ V+IK      
Sbjct: 362 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 421

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            L +A+ +  +M   GV PD +TY T+I + C+   +  A +  NQM    + P    YN
Sbjct: 422 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 481

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            LI G C +G L  A  L+  +  + + L  V +++II   C  G V  A   F   V  
Sbjct: 482 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 541

Query: 583 GFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           G       Y+                  F  M+S G  P+  +   ++  + + G +   
Sbjct: 542 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 601

Query: 628 FELAAVMIKSGLLPDKFL 645
             L   M++ G+ P   L
Sbjct: 602 LSLFREMLQRGIKPSTIL 619



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 193/402 (48%), Gaps = 7/402 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETP 60
            Y+  GM+  A+ +  +M++  +K  + TY +++  L    +  D M      I     P
Sbjct: 416 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 475

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            + Y  + +I G C    L  A   + E         +V  ++I++  CKLG    A+ +
Sbjct: 476 -DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 534

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F L +  GLHPDA  Y++L+ G C+ G ME+AL   + M   G+EP+ + Y  L  G+  
Sbjct: 535 FDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCK 594

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN-VEEGLKLREVMLSQGFKLNVI 239
           + +I     + +++L +G  P  + Y+++I G  Q G  V   +K  E M   G  +++ 
Sbjct: 595 IGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHE-MTESGIAMDIC 653

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+++L  + K+   DEA+ L  E+ A+ +K +++T + +I G+ +  +V +A  L+  +
Sbjct: 654 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI 713

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
              R+ PN   +  ++  L ++ ++ EA   F S+  + C  +  L N ++   +K   I
Sbjct: 714 SRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEI 773

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
             A     ++ E+  S   +T   L+  F   G   +  R L
Sbjct: 774 VRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 32/249 (12%)

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGP-----THVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           +A C  G     +AL     ++A GP     T  TY +++    +  + + A+     + 
Sbjct: 93  SAACRSGPAL-AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLL 151

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE-----PTSATYNILIDGLCV 530
             G+  + I  N ++  FC+ K   +A  +L    LH        P   +Y+IL+  LC 
Sbjct: 152 RTGLRVNIIIANHLLEGFCEAKRTDEALDIL----LHRTPELGCVPDVFSYSILLKSLCD 207

Query: 531 NGDLKNADCLLVSLQEHNI--SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
            G    AD LL  + E     S   VAY T+I     EGDV+KA   F +MV++G    +
Sbjct: 208 QGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDL 267

Query: 589 RDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             Y                ++F   M++    P+      ++  +   G       +   
Sbjct: 268 VTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 327

Query: 634 MIKSGLLPD 642
           M +  +LPD
Sbjct: 328 MRRHSILPD 336


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 269/529 (50%), Gaps = 2/529 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   + VIDG  ++  +  A    +E   +   P +V+ N+++   CK    + A+   
Sbjct: 218 NVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFL 277

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+   + P+ ++YN LI+G    G  +EA+    +M RH + PD +T S+L       
Sbjct: 278 RQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKY 337

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  V   + +KG +PD+ +Y +++ GY   G + +   L ++ML  G   +   +
Sbjct: 338 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 397

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+ +    G +D+A+ +  EM   G+KPD+VTY  +I  LC+  K+  A++ +N+M  
Sbjct: 398 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 457

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIG 360
           + ++P+ +A+  ++ G C    + +A+    S IM+N +  D+V ++ +I+   KLG + 
Sbjct: 458 QGVAPDKYAYNCLIQGFCTHGSLLKAKELI-SEIMNNGMHLDIVFFSSIINNLCKLGRVM 516

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  ++   +   + P  V ++ L+ G+C  GK+  A R+ D +   G+EP+ V Y T +
Sbjct: 517 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 576

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YC+ G I   L+L +EM  + I P+ + Y+++I GL +  +   A     +M   G+ 
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIA 636

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            D  TYN ++R   K +   +A  L  ++   N++    T N +IDG+     ++ A  L
Sbjct: 637 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 696

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             S+    +  + V Y+ +I     EG V +A   F  M   G E + R
Sbjct: 697 FASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 745



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/518 (26%), Positives = 254/518 (49%), Gaps = 16/518 (3%)

Query: 82  AILFLQETAGKEFGPSVVSLN----AIMSRYC-KLGFAEVAKGLFCLMLKYGLHPDAFSY 136
           A+      A +  GP V+S      AI+   C +    E+A   F  +L+ GL  +    
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 149

Query: 137 NILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           N L+ G C A   +EAL+   +     G  PD  +YSIL K      + SG    + +++
Sbjct: 150 NHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGK-SGQADDLLRMM 208

Query: 196 IKGS---DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
            +G     P++V Y  +I G+ + G+V +   L + M+ +G   +++ Y+ ++ ++CK+ 
Sbjct: 209 AEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKAR 268

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            +D+A   L +M    + P+  TY+ LI G     +  +A++++ EM    I P+     
Sbjct: 269 AMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 328

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC+   I EAR  FD++ M     DV  YNIM++GY   G + +   L+  ++  
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 388

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            I+P   TFN LI  +   G +  A  + + ++ HG++P  VTY T + A C  G +   
Sbjct: 389 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           +    +M  + + P    Y  +I+G C    L +A +L+ ++   G+  D + +++II +
Sbjct: 449 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508

Query: 493 FCK---CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
            CK     D +  F L   + LH   P +  Y++L+DG C+ G ++ A  +  ++    I
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLH---PDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
               V Y T++  +C  G + + ++ F +M+++G + S
Sbjct: 566 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPS 603



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/584 (23%), Positives = 273/584 (46%), Gaps = 38/584 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + + G V+ A  +  +M +  +   + TYNS+++ L   R  D        +       N
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 288

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T + +I G     + ++A+   +E       P VV+L+ +M   CK G  + A+ +F 
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G +PD FSYNI+++G    G + +  +  + M   G+ PD  T+++L K +    
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 408

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A  +  ++   G  PD+VTY  +I   C+IG +++ ++    M+ QG   +  AY+
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 468

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C  G + +A  L+ E+   G+  D+V +S +I  LCK  +V  A  +++   + 
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P++  +  ++ G C    + +A   FD+++ +    +VV+Y  +++GY K+G I E 
Sbjct: 529 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 588

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + L+R+++++ I PS + ++ +I G  + G+   A+     +K H               
Sbjct: 589 LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK-----VKFH--------------- 628

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
                          EM    I     TY +V++GL K     EA+ L +++  + V  +
Sbjct: 629 ---------------EMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 673

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            IT NT+I    + + + +A  L   +    L P+  TY+I+I  L   G ++ A+ +  
Sbjct: 674 IITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFS 733

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           S+Q             +++    + ++ +A  +  ++ E+ F +
Sbjct: 734 SMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSL 777



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 246/498 (49%), Gaps = 5/498 (1%)

Query: 33  TYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
           TYN+L+Y    T   W     ++ +++      +V T S+++  LC+  ++++A      
Sbjct: 291 TYNNLIYGYSSTG-QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDT 349

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
            A K   P V S N +++ Y   G       LF LML  G+ PD +++N+LI      G 
Sbjct: 350 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 409

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +++A+   N+M  HGV+PD +TY  +      + ++  A +   +++ +G  PD   Y  
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 469

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI G+C  G++ +  +L   +++ G  L+++ +S +++++CK GR+ +A  +      VG
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           L PD V YS+L+ G C   K+ KA+++++ M S  I PN   +  ++ G C+   I E  
Sbjct: 530 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 589

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             F  ++        +LY+I+IDG  + G    A   + ++ E  I+  I T+N ++ G 
Sbjct: 590 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGL 649

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            KN    +A  L   ++   ++ + +T  T ++   +   ++    L   +    + P+ 
Sbjct: 650 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSV 709

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VTY+++I  L K+  ++EA  +   M   G  P+    N ++R   K  ++ +A   L++
Sbjct: 710 VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSK 769

Query: 509 MWLHNLEPTSATYNILID 526
           +   N      T  +L+D
Sbjct: 770 IDERNFSLEHLTTMLLVD 787



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 210/429 (48%)

Query: 47  MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMS 106
           M DL+D +       + YT +++I        L  A++   E       P VV+   +++
Sbjct: 378 MTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA 437

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
             C++G  + A   F  M+  G+ PD ++YN LI G C  GS+ +A E  +++  +G+  
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHL 497

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           D + +S +      L ++  A  +    +  G  PD V Y++L+ GYC +G +E+ L++ 
Sbjct: 498 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVF 557

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           + M+S G + NV+ Y  L++  CK GRIDE L L  EM   G+KP  + YSI+I GL + 
Sbjct: 558 DAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQA 617

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            +   A   ++EM    I+ +   +  +L GL +     EA   F  L   N   +++  
Sbjct: 618 GRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 677

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N MIDG  +   + EA  L+  +   R+ PS+VT++ +I    K G V +A  +  +++ 
Sbjct: 678 NTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 737

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G EP++      +    ++  I R  A L +++ +     H+T  +++     +   +E
Sbjct: 738 AGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797

Query: 467 AVQLLEDMY 475
            ++ L   Y
Sbjct: 798 HIRFLPAKY 806



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 213/498 (42%), Gaps = 53/498 (10%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG- 259
           P   TY +L+    +    E  L     +L  G ++N+I  + LL   C++ R DEAL  
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDK------------------------------- 288
           LL+    +G  PD+ +YSIL++ LC Q K                               
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 228

Query: 289 ------VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
                 V+KA  L+ EM  + I P+   + +++  LC+   + +A  +   ++    + +
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 288

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
              YN +I GY   G   EAV++++++    I P +VT + L+   CK GK+ +AR + D
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
           T+ + G  P   +Y   +N Y  +G +  +  L   M    I P   T+ V+IK      
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 408

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            L +A+ +  +M   GV PD +TY T+I + C+   +  A +  NQM    + P    YN
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 468

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            LI G C +G L  A  L+  +  + + L  V +++II   C  G V  A   F   V  
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 583 GFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           G       Y+                  F  M+S G  P+  +   ++  + + G +   
Sbjct: 529 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 588

Query: 628 FELAAVMIKSGLLPDKFL 645
             L   M++ G+ P   L
Sbjct: 589 LSLFREMLQRGIKPSTIL 606



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 193/402 (48%), Gaps = 7/402 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETP 60
            Y+  GM+  A+ +  +M++  +K  + TY +++  L    +  D M      I     P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            + Y  + +I G C    L  A   + E         +V  ++I++  CKLG    A+ +
Sbjct: 463 -DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 521

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F L +  GLHPDA  Y++L+ G C+ G ME+AL   + M   G+EP+ + Y  L  G+  
Sbjct: 522 FDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCK 581

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN-VEEGLKLREVMLSQGFKLNVI 239
           + +I     + +++L +G  P  + Y+++I G  Q G  V   +K  E M   G  +++ 
Sbjct: 582 IGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHE-MTESGIAMDIC 640

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+++L  + K+   DEA+ L  E+ A+ +K +++T + +I G+ +  +V +A  L+  +
Sbjct: 641 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI 700

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
              R+ P+   +  ++  L ++ ++ EA   F S+  + C  +  L N ++   +K   I
Sbjct: 701 SRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEI 760

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
             A     ++ E+  S   +T   L+  F   G   +  R L
Sbjct: 761 VRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 172/385 (44%), Gaps = 29/385 (7%)

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           L P   TY+IL+    +  +   A+  + ++    +  N      +L G CE +   EA 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA- 165

Query: 329 MYFDSLIMSN----CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI--SPSIVTFN 382
              D L+       C+ DV  Y+I++      G  G+A  L R + E     SP++V +N
Sbjct: 166 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 223

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           ++I GF K G V  A  L   +   G+ P  VTY + ++A C+   + +  A L++M  K
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 283

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P + TY  +I G     + +EAV++ ++M    + PD +T + ++ S CK   +++A
Sbjct: 284 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 343

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
             + + M +    P   +YNI+++G    G L +   L   +    I+     +  +IKA
Sbjct: 344 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 403

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           +   G + KAM  F +M         RD+           G  PD      ++ A  + G
Sbjct: 404 YANCGMLDKAMIIFNEM---------RDH-----------GVKPDVVTYRTVIAALCRIG 443

Query: 623 DLGSVFELAAVMIKSGLLPDKFLIN 647
            +    E    MI  G+ PDK+  N
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYN 468



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 32/249 (12%)

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGP-----THVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           +A C  G     +AL     ++A GP     T  TY +++    +  + + A+     + 
Sbjct: 80  SAACRSGP-ALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLL 138

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE-----PTSATYNILIDGLCV 530
             G+  + I  N ++  FC+ K   +A  +L    LH        P   +Y+IL+  LC 
Sbjct: 139 RTGLRVNIIIANHLLEGFCEAKRTDEALDIL----LHRTPELGCVPDVFSYSILLKSLCD 194

Query: 531 NGDLKNADCLLVSLQEHNI--SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
            G    AD LL  + E     S   VAY T+I     EGDV+KA   F +MV++G    +
Sbjct: 195 QGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDL 254

Query: 589 RDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             Y                ++F   M++    P+      ++  +   G       +   
Sbjct: 255 VTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 314

Query: 634 MIKSGLLPD 642
           M +  +LPD
Sbjct: 315 MRRHSILPD 323


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 171/642 (26%), Positives = 300/642 (46%), Gaps = 58/642 (9%)

Query: 52  DDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
           + +K S  P NV     ++ GLC+  R+Q+A+               V+   ++  +C++
Sbjct: 250 EGVKASAVPYNV-----LMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 304

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
              E+A  +   M++ G  P   + + +I  L     +EEA      +G  G+ P+   Y
Sbjct: 305 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 364

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + L        +   A ++ +++  +G +P+ VTY +LI   C+ G +E+ L L + M  
Sbjct: 365 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 424

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +G K+ V  Y+ L++  CK G +D A GLL  M   GL P   +YS LI GLC+   +  
Sbjct: 425 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 484

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
            ++L+ EM  + I+ N++   A++ G C+ + + EA   FD +I SN I + V +N+MI+
Sbjct: 485 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 544

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI-------------------------- 385
           GY  +GNI +A QLY Q++E  + P   T+ SLI                          
Sbjct: 545 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVL 604

Query: 386 ---------YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
                    YGF + G+  +   L D + + G++   V++T  + A  ++ + ++   L 
Sbjct: 605 NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 664

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           +EM+ + + P  + YT +I  L K+  + +A+   + M V G +P+ +T+  +I + CK 
Sbjct: 665 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKS 724

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA-DCLLVSLQEHNISLTKVA 555
             L  A  L  +M   N+ P   TYN  +D     GD++ A D     LQ H  S+  V+
Sbjct: 725 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASI--VS 782

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFE-------------ISIRDYTKSF--FCMML 600
           +  +IK  C  G + +A+    ++ E GF                + D  K+F  +  ML
Sbjct: 783 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 842

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             G  PD     + +   +  G+      +   MI+SG+ P+
Sbjct: 843 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 884



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 265/530 (50%), Gaps = 4/530 (0%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNS 67
           +V +A  +  K+ +L +  ++  YN+L+  L   +   D   L+ ++       N  T +
Sbjct: 341 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 400

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I+I  LC++  ++DA+    +   K    +V   N++++ YCK G  + A+GL   M+K 
Sbjct: 401 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 460

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           GL P A SY+ LI GLC  G +   +E   +M   G+  +  T++ L  GF    ++  A
Sbjct: 461 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 520

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++  K++     P+ VT+ V+I GYC +GN+ +  +L + M+  G K +   Y  L+S 
Sbjct: 521 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 580

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C +  + +A   + ++E      +  + + L+ G  ++ +  +   L++EM  + +  +
Sbjct: 581 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 640

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
             +   I+    ++    ++ + F  +       D + Y  MID   K  N+ +A+  + 
Sbjct: 641 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 700

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           Q++    SP+ VT   LI   CK+G +  A  L   +    + P+  TY  F++ +  EG
Sbjct: 701 QMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEG 760

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           ++++   L   M    +    V++ ++IKGLCK  K+QEA+ L+  +   G +PD I+Y+
Sbjct: 761 DMEKAKDLHSAMLQGHLASI-VSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYS 819

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           TII   CK  D+ KAF+L N+M    L+P    YNI I    V+G+   A
Sbjct: 820 TIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKA 869



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 160/643 (24%), Positives = 288/643 (44%), Gaps = 28/643 (4%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY----NLRHTDIMWDLYDDIKVSETP 60
            Y  +  +  A  ++ +M+   +K S   YN L+Y    N+R  + +      + +  T 
Sbjct: 230 AYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTA 289

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
             V   ++V  G C+   L+ A+    +     F PS  + + ++    K    E A  L
Sbjct: 290 DEVTYRTLVY-GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL 348

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
            C +   G+ P+ F+YN LI  LC     ++A     +M   G+EP+ +TY+IL      
Sbjct: 349 ACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK 408

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              I  A  +  K+  KG    +  Y  LI GYC+ G+++    L   M+ +G      +
Sbjct: 409 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 468

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS L++ +C++G +   + L  EM   G+  +  T++ LI G CK  K+ +A +L+++M 
Sbjct: 469 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 528

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
              + PN      ++ G C    I +A   +D ++      D   Y  +I G      + 
Sbjct: 529 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 588

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A +    L       +  +  +L+YGF + G+  +   L D + + G++   V++T  +
Sbjct: 589 KANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 648

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
            A  ++ + ++   L +EM+ + + P  + YT +I  L K+  + +A+   + M V G +
Sbjct: 649 YAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYS 708

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA-DC 539
           P+ +T+  +I + CK   L  A  L  +M   N+ P   TYN  +D     GD++ A D 
Sbjct: 709 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL 768

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
               LQ H  S+  V++  +IK  C  G + +A+    ++ E GF      Y+       
Sbjct: 769 HSAMLQGHLASI--VSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII---- 822

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                    E+C++        GD+   FEL   M+  GL PD
Sbjct: 823 --------HELCKM--------GDINKAFELWNEMLYKGLKPD 849



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 151/575 (26%), Positives = 268/575 (46%), Gaps = 50/575 (8%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           L L  G+  + ++ + ++  L        A +  + M + GV  D   Y+   + +    
Sbjct: 176 LSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR 235

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            + GA  ++ ++  +G     V Y VL+ G C+   V+E ++++ VM++ G   + + Y 
Sbjct: 236 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 295

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C+   ++ AL + ++M  +G  P     S +I  L K++ V +A  L  ++   
Sbjct: 296 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 355

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN FA+ A++  LC+ E   +A   F  +       + V Y I+I    K G I +A
Sbjct: 356 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 415

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + L+ ++ +K I  ++  +NSLI G+CK G +  AR LL  +   GL P+A +Y+  +  
Sbjct: 416 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 475

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C  G++   + L +EM  + I   + T+T +I G CK  K+ EA +L + M    V P+
Sbjct: 476 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 535

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           ++T+N +I  +C   ++RKAFQL +QM    L+P + TY  LI GLC+   +  A+  + 
Sbjct: 536 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 595

Query: 543 SLQE-----HNISLTK------------------------------VAYTTIIKAHCAEG 567
            L+      +N SLT                               V++T I+ A   + 
Sbjct: 596 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 655

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT-------------KSFFC--MMLSNGFPPDQEICE 612
           D  K+   F +M E+G +     YT             ++  C   M+ +G+ P+     
Sbjct: 656 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHT 715

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           V++    + G LGS   L   M+   +LP+KF  N
Sbjct: 716 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 750



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 249/490 (50%), Gaps = 12/490 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETP 60
           + GM+ DA+ +  KM++  +KV++  YNSL+          R   ++  +   +K   TP
Sbjct: 408 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM---VKEGLTP 464

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
               + S +I GLC+   L   +   +E A +    +  +  A+++ +CK    + A  L
Sbjct: 465 -TAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 523

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M+   + P+  ++N++I G C+ G++ +A +  + M   G++PD  TY  L  G  L
Sbjct: 524 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 583

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
            S +S A + +  L    +  +  + T L+ G+ + G   E   L + M  +G KL++++
Sbjct: 584 TSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVS 643

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           +++++ +  K    +++  L  EM+  G+KPD + Y+ +I  L K++ + +A+  +++M 
Sbjct: 644 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 703

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
               SPN+  H  ++  LC+   +  A +    ++  N + +   YN  +D +   G++ 
Sbjct: 704 VDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 763

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  L+  +++  ++ SIV+FN LI G CK GK+ +A  L+  I   G  P  ++Y+T +
Sbjct: 764 KAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 822

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C+ G+I +   L  EM  K + P  V Y + I+      +  +A+ +  +M   GV 
Sbjct: 823 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQ 882

Query: 481 PDQITYNTII 490
           P+  TY  ++
Sbjct: 883 PNWDTYRALL 892



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 1/271 (0%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           + L+D++ V     ++ + +I++    +Q   + + +  +E   +   P  +    ++  
Sbjct: 626 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 685

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
             K      A   +  M+  G  P+  ++ +LI+ LC +G +  A     +M    V P+
Sbjct: 686 LSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 745

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
             TY+     F     +  A K +   +++G    IV++ +LI G C+ G ++E + L  
Sbjct: 746 KFTYNCFLDYFATEGDMEKA-KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMS 804

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            +   GF  + I+YS ++  +CK G I++A  L  EM   GLKPD+V Y+I IR      
Sbjct: 805 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHG 864

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
           +  KA+ +Y  M    + PN   + A+L G+
Sbjct: 865 ESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 61/115 (53%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+I GLC+  ++Q+AI  + +     F P  +S + I+   CK+G    A  L+  ML 
Sbjct: 784 NILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 843

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            GL PD  +YNI I    + G  ++AL    +M R GV+P+  TY  L  G  L+
Sbjct: 844 KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 898



 Score = 43.1 bits (100), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 2/109 (1%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL   I  S    +  + S +I  LC+   +  A     E   K   P VV+ N I  R+
Sbjct: 801 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYN-IFIRW 859

Query: 109 CKL-GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           C + G ++ A G++  M++ G+ P+  +Y  L+ G+ +  S  +AL  T
Sbjct: 860 CNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKGQALLLT 908


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 160/583 (27%), Positives = 266/583 (45%), Gaps = 39/583 (6%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L DAI F           + V  N ++  + ++   +VA  L+  M    +  + +S+NI
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI------- 191
           LI   C    +  +L     + + G +PD +T++ L  G  L  +IS A  +        
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 192 --------QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
                    +++  G  P ++T+  LI G C  G V E   L   M+ +G  ++V+ Y  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +++ MCK G    AL LL +ME   +KPD+V YS +I  LCK      A  L++EM  K 
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I+PN F +  ++ G C     ++A+     +I      DV+ +N +I   VK G + EA 
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L  +++ + I P  VT+NS+IYGFCK+ +  DA+ + D +      P  VT+ T ++ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVY 442

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C    +   + LL+E+  + +     TY  +I G C+   L  A  L ++M   GV PD 
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           IT N ++  FC+ + L +A +L   + +  ++  +  YNI+I G+C    +  A  L  S
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           L  H +      Y  +I   C +  +  A   F +M +                    NG
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD--------------------NG 602

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
             PD      ++    + G++    EL + M  +G   D F I
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 140/544 (25%), Positives = 249/544 (45%), Gaps = 49/544 (9%)

Query: 41  LRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVS 100
           +   D+   LY  +++   P N+Y+ +I+I   C   +L  ++    +     F P VV+
Sbjct: 119 MNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVT 178

Query: 101 LNAIMSRYC----------------KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
            N ++   C                + GF E A  LF  M++ GL P   ++N LI+GLC
Sbjct: 179 FNTLLHGLCLEDRISEALALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLC 237

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
           + G + EA    N M   G+  D +TY  +  G   +     A  ++ K+      PD+V
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            Y+ +I   C+ G+  +   L   ML +G   NV  Y+ ++   C  GR  +A  LL +M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
               + PD++T++ LI    K+ K+ +A +L +EM  + I P++  + +++ G C+    
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417

Query: 325 TEARMYFD-----SLIMSNCIQDV--------------------------VLYNIMIDGY 353
            +A+  FD      ++  N I DV                            YN +I G+
Sbjct: 418 DDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            ++ N+  A  L++++I   + P  +T N L+YGFC+N K+ +A  L + I++  ++   
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           V Y   ++  C+   +     L   +    + P   TY V+I G C +  + +A  L   
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G  PD  TYNT+IR   K  ++ K+ +L+++M  +     + T  ++ D L  +G 
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGR 656

Query: 534 LKNA 537
           L  +
Sbjct: 657 LDKS 660



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 239/487 (49%), Gaps = 24/487 (4%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD------------------LYDD-IKVSE 58
              K+ +L  +  + T+N+LL+ L   D + +                  L+D  +++  
Sbjct: 163 TFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGL 222

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           TP  V T + +I+GLC + R+ +A   + +  GK     VV+   I++  CK+G  + A 
Sbjct: 223 TPV-VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 281

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M +  + PD   Y+ +I  LC  G   +A    ++M   G+ P+  TY+ +  GF
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               + S A ++++ ++ +  +PD++T+  LI    + G + E  KL + ML +    + 
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y+ ++   CK  R D+A  +   M +    PD+VT++ +I   C+  +V + +QL  E
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLRE 457

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           +  + +  N+  +  ++ G CE + +  A+  F  +I      D +  NI++ G+ +   
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EA++L+  +   +I    V +N +I+G CK  KV +A  L  ++ +HG+EP   TY  
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++ +C +  I     L  +M+     P + TY  +I+G  K  ++ ++++L+ +M   G
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637

Query: 479 VTPDQIT 485
            + D  T
Sbjct: 638 FSGDAFT 644



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/462 (23%), Positives = 205/462 (44%), Gaps = 44/462 (9%)

Query: 206 YTVLICG-----YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           YT + C      + ++   +  + L   M  +   LN+ ++++L+   C   ++  +L  
Sbjct: 104 YTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLST 163

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA---------------IQLYNEMCSKRIS 305
             ++  +G +PD+VT++ L+ GLC +D++ +A               + L+++M    ++
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P       ++ GLC +  + EA    + ++      DVV Y  +++G  K+G+   A+ L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++ E  I P +V ++++I   CK+G  +DA+ L   +   G+ P+  TY   ++ +C 
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G       LL++M  + I P  +T+  +I    K+ KL EA +L ++M    + PD +T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YN++I  FCK      A  + + M      P   T+N +ID  C    +     LL  + 
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
              +      Y T+I   C   +++ A   F +M+                    S+G  
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI--------------------SHGVC 499

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           PD   C ++L  F +   L    EL  V+  S +  D    N
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 3/204 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPR 61
           VY R   V + + ++ ++    L  +  TYN+L++     D +    DL+ ++       
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +  T +I++ G C+  +L++A+   +     +     V+ N I+   CK    + A  LF
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
           C +  +G+ PD  +YN++I G C   ++ +A    + M  +G EPD  TY+ L +G    
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620

Query: 182 SQISGAWKVIQKLLIKGSDPDIVT 205
            +I  + ++I ++   G   D  T
Sbjct: 621 GEIDKSIELISEMRSNGFSGDAFT 644


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 160/548 (29%), Positives = 276/548 (50%), Gaps = 15/548 (2%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
           V +  G++ DAV  +A+++EL +  + +T N +L  L   R   ++  L++ +       
Sbjct: 131 VLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAP---- 186

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKG 119
           NV+T +IVID LC++  L +A         KE G  P VV+ N+++  Y K G  +  + 
Sbjct: 187 NVFTFNIVIDFLCKEGELAEARSLFSRM--KEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M + G   D  +YN LI+  C  G ME A  +   M R GV  + +T+S     F 
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               +  A K+  ++ ++G   +  TYT LI G C+ G +++ + L + M+ QG  LNV+
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+VL+  +CK  ++ EA  +L  ME  G++ + + Y+ LI G        KA+ L +EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            +K +  +   +GA++ GLC    + EA+     +  S    + ++Y  M+D   K G +
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA+ + +++++    P+++T+ +LI G CK G + +A    + ++  GL+P+   YT  
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C+ G +   + L  EM  K +    V YT ++ G  KQ  L +A  L   M   G+
Sbjct: 545 VDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             D   Y   I  FC    + +A ++ ++M  H + P  A YN LI      G+L+ A  
Sbjct: 605 QLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEA-- 662

Query: 540 LLVSLQEH 547
             +SLQ+ 
Sbjct: 663 --ISLQDE 668



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 147/587 (25%), Positives = 263/587 (44%), Gaps = 27/587 (4%)

Query: 47  MWDLYDDIKVSETPRNVYTNSIV---IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNA 103
           + DL     ++  PR     S+V   +  L  +  L DA+  +         P+  + N 
Sbjct: 103 LVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNH 162

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           I+ R  +     + + LF    +    P+ F++NI+I  LC  G + EA    + M   G
Sbjct: 163 ILLRLARDRSGRLVRRLF----EQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMG 218

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
             PD +T++ L  G+    ++    ++++++   G   D+VTY  LI  +C+ G +E   
Sbjct: 219 CLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAY 278

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
                M  +G   NV+ +S  + + CK G + EA+ L  +M   G+  +  TY+ LI G 
Sbjct: 279 GYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGT 338

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CK  ++  AI L +EM  + +  N   +  ++ GLC++  + EA      +  +    + 
Sbjct: 339 CKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANE 398

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           +LY  +I G+    N  +A+ L  ++  K +   I  + +LI G C   K+ +A+ LL  
Sbjct: 399 LLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTK 458

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +   GLEP+ + YTT M+A  + G +   +A+LQ++      P  +TY  +I GLCK   
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS 518

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           + EA+     M  +G+ P+   Y  ++   CK   L +A QL N+M    +      Y  
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L+DG    G+L +A  L   + +  + L    YT  I   C                   
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC------------------- 619

Query: 584 FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
             +++    +  F  M+ +G  PD+ +   ++  + + G+L     L
Sbjct: 620 -NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 241/496 (48%), Gaps = 3/496 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           + G + +A  + ++MKE+     + T+NSL+         D +  L ++++ S    +V 
Sbjct: 200 KEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVV 259

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I+  C+  R++ A  +      +    +VV+ +  +  +CK G    A  LF  M
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G+  + F+Y  LI G C AG +++A+   ++M R GV  + +TY++L  G     ++
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A  V++ +   G   + + YT LI G+    N E+ L L   M ++G +L++  Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +C   ++DEA  LL +M+  GL+P+ + Y+ ++    K  KV +AI +  ++     
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   + A++ GLC+   I EA  +F+ +       +V  Y  ++DG  K G + EAVQ
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+ +++ K +S   V + +L+ G+ K G + DA  L   +   GL+     YT F++ +C
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
               +     +  EM    I P    Y  +I    K   L+EA+ L ++M  +  +    
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTDS 679

Query: 485 TYNTIIRSFCKCKDLR 500
              T   S C  K +R
Sbjct: 680 DTATDAGSVCTTKCIR 695


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 162/542 (29%), Positives = 272/542 (50%), Gaps = 46/542 (8%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDD---IKVSETPR 61
            + + G V +A+ + +KM+E  +  ++ TYN+++  L     M   YD+    K     R
Sbjct: 261 AFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLG----MSGRYDEAFMFKEKMVER 316

Query: 62  NV----YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVV------------------ 99
            V     T SI++ GL +  R+ DA   L+E   K F P+V+                  
Sbjct: 317 GVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKA 376

Query: 100 -----------------SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
                            + N ++  YCK G A++A+ L   ML  G + +  S+  +I  
Sbjct: 377 IEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICL 436

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           LC     + AL F  +M    + P     + L  G     + S A ++  K L KG   D
Sbjct: 437 LCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVD 496

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
             T   L+ G C+ G +EEG ++++ +L +GF ++ ++Y+ L+S  C + ++DEA   + 
Sbjct: 497 TKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMD 556

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           EM   GLKPD  TYSILIRGL   +KV +AIQ + +     + P+ + +  ++ G C+ E
Sbjct: 557 EMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAE 616

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
              E +  FD ++ +N   + V+YN +I  Y + G +  A++L   +  K ISP+  T+ 
Sbjct: 617 RTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYT 676

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           SLI G     +V +A+ LL+ +++ GLEP+   YT  ++ Y + G + ++  LL+EM +K
Sbjct: 677 SLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 736

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P  +TYTV+I G  +   + EA +LL +M   G+ PD ITY   I  + K   + +A
Sbjct: 737 NVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQA 796

Query: 503 FQ 504
           F+
Sbjct: 797 FK 798



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 248/527 (47%), Gaps = 35/527 (6%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           K   P V      ++ +CK G  E A  LF  M + G+ P+  +YN +I GL ++G  +E
Sbjct: 246 KGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDE 305

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A  F   M   GVEP  ITYSIL KG     +I  A+ V++++  KG  P+++ Y  LI 
Sbjct: 306 AFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLID 365

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG--- 268
              + G++ + ++++++M+S+G  L    Y+ L+   CKSG+ D A  LL EM ++G   
Sbjct: 366 SLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNV 425

Query: 269 --------------------------------LKPDLVTYSILIRGLCKQDKVHKAIQLY 296
                                           + P     + LI GLCK  K  KA++L+
Sbjct: 426 NQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELW 485

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +  +K    ++    A+L GLCE   + E       ++    + D V YN +I G    
Sbjct: 486 LKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGN 545

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             + EA     ++++K + P   T++ LI G     KV +A +     K +G+ P   TY
Sbjct: 546 KKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTY 605

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           +  ++  C+    +    L  EM +  + P  V Y  +I   C+  +L  A++L EDM  
Sbjct: 606 SVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKH 665

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G++P+  TY ++I+       + +A  LL +M +  LEP    Y  LIDG    G +  
Sbjct: 666 KGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 725

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +CLL  +   N+   K+ YT +I  +  +G+V +A     +M EKG
Sbjct: 726 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKG 772



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 214/506 (42%), Gaps = 51/506 (10%)

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           AL+    +   G+ P   T +IL       ++     +    ++ KG  PD+  +T  I 
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFH-VVCKGVSPDVYLFTTAIN 260

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
            +C+ G VEE ++L   M   G   NV+ Y+ ++  +  SGR DEA     +M   G++P
Sbjct: 261 AFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEP 320

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
            L+TYSIL++GL K  ++  A  +  EM  K   PN                        
Sbjct: 321 TLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPN------------------------ 356

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
                      V++YN +ID  ++ G++ +A+++   ++ K +S +  T+N+LI G+CK+
Sbjct: 357 -----------VIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKS 405

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G+   A RLL  +   G   +  ++T+ +   C        L  + EM  + + P     
Sbjct: 406 GQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLL 465

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           T +I GLCK  K  +AV+L       G   D  T N ++   C+   L + F++  ++  
Sbjct: 466 TTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILG 525

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
                   +YN LI G C N  L  A   +  + +  +      Y+ +I+       V +
Sbjct: 526 RGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEE 585

Query: 572 AMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLI 616
           A+ F+      G    +  Y+               +  F  M+SN   P+  +   ++ 
Sbjct: 586 AIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIG 645

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPD 642
           A+ + G L    EL   M   G+ P+
Sbjct: 646 AYCRSGRLSMALELREDMKHKGISPN 671



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 163/377 (43%), Gaps = 21/377 (5%)

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G+ P   T +IL+  L +  +  K  + ++ +C K +SP+ +     +   C+   + EA
Sbjct: 213 GMFPSKTTCNILLTSLVRATEFQKCCEAFHVVC-KGVSPDVYLFTTAINAFCKGGKVEEA 271

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F  +  +  + +VV YN +IDG    G   EA     +++E+ + P+++T++ L+ G
Sbjct: 272 IELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKG 331

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
             K  ++ DA  +L  +   G  P+ + Y   +++  E G++ + + +   M +K +  T
Sbjct: 332 LTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLT 391

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TY  +IKG CK  +   A +LL++M  IG   +Q ++ ++I   C       A + + 
Sbjct: 392 SSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVG 451

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M L N+ P       LI GLC +G    A  L +        +       ++   C  G
Sbjct: 452 EMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAG 511

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
            +           E+GF I            +L  GF  D+     ++        L   
Sbjct: 512 KL-----------EEGFRIQKE---------ILGRGFVMDRVSYNTLISGCCGNKKLDEA 551

Query: 628 FELAAVMIKSGLLPDKF 644
           F     M+K GL PD +
Sbjct: 552 FMFMDEMVKKGLKPDNY 568



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 33/157 (21%), Positives = 72/157 (45%), Gaps = 3/157 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPR 61
            Y R+G +  A+ +   MK   +  +  TY SL+  +     + +   L +++++     
Sbjct: 646 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEP 705

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV+  + +IDG  +  ++      L+E   K   P+ ++   ++  Y + G    A  L 
Sbjct: 706 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 765

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
             M + G+ PD+ +Y   I+G    G + +A + +++
Sbjct: 766 HEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDE 802


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 249/465 (53%), Gaps = 3/465 (0%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           + ++I +  L +   L++ + FL+    +   P V++  +++  +C+ G    A  +  +
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +   G  PD  +YN+LI G C +G +++AL+    + R  V PD +TY+ + +      +
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQV---LERMSVAPDVVTYNTILRSLCDSGK 224

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A +V+ + + +   PD++TYT+LI   C    V + +KL + M  +G K +V+ Y+V
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++ +CK GR+DEA+  L  M   G +P+++T++I++R +C   +   A +L  +M  K 
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            SP+      ++  LC K ++  A    + +    C+ + + YN ++ G+ +   +  A+
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAI 404

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +    ++ +   P IVT+N+L+   CK+GK   A  +L+ +   G  P  +TY T ++  
Sbjct: 405 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGL 464

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            + G  +    LL+EM  K + P  +TY+ +++GL  + K+ EA+++  DM  + + P  
Sbjct: 465 TKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSA 524

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +TYN I+   CK +   +A   L  M     +PT ATY ILI+G+
Sbjct: 525 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 240/461 (52%), Gaps = 3/461 (0%)

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           + F+ NI +  L   G +EE L+F   M   G  PD I  + L +GF    +   A +++
Sbjct: 106 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIM 165

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           + L   G+ PD++TY VLI GYC+ G +++ L++ E M       +V+ Y+ +L S+C S
Sbjct: 166 EILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDS 222

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G++ EA+ +L         PD++TY+ILI   C    V +A++L +EM  K   P+   +
Sbjct: 223 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 282

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++ G+C++  + EA  + +++ +  C  +V+ +NI++      G   +A +L   ++ 
Sbjct: 283 NVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLR 342

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K  SPS+VTFN LI   C+   +  A  +L+ +  HG  P++++Y   ++ +C+E  + R
Sbjct: 343 KGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDR 402

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            +  L+ M ++   P  VTY  ++  LCK  K   AV++L  +   G +P  ITYNT+I 
Sbjct: 403 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVID 462

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
              K      A +LL +M    L+P   TY+ L+ GL   G +  A  +   ++  +I  
Sbjct: 463 GLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKP 522

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           + V Y  I+   C      +A+ F   MVEKG + +   YT
Sbjct: 523 SAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYT 563



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 236/452 (52%), Gaps = 7/452 (1%)

Query: 114 AEVAKGLFCL--MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
            E+ +GL  L  M+  G  PD  +   LI G C +G   +A      +   G  PD ITY
Sbjct: 121 GELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITY 180

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           ++L  G+    +I  A +V++++ +    PD+VTY  ++   C  G ++E +++ +  + 
Sbjct: 181 NVLIGGYCKSGEIDKALQVLERMSVA---PDVVTYNTILRSLCDSGKLKEAMEVLDRQMQ 237

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +    +VI Y++L+ + C    + +A+ LL EM   G KPD+VTY++LI G+CK+ ++ +
Sbjct: 238 RECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDE 297

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           AI+  N M      PN   H  IL  +C      +A      ++   C   VV +NI+I+
Sbjct: 298 AIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILIN 357

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
              +   +G A+ +  ++ +    P+ +++N L++GFC+  K+  A   L+ +   G  P
Sbjct: 358 FLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 417

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
             VTY T + A C++G     + +L ++ +K   P  +TY  VI GL K  K + A +LL
Sbjct: 418 DIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELL 477

Query: 472 EDMYVIGVTPDQITYNTIIRSF-CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           E+M   G+ PD ITY+T++R   C+ K + +A ++ + M   +++P++ TYN ++ GLC 
Sbjct: 478 EEMRRKGLKPDIITYSTLLRGLGCEGK-VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCK 536

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
                 A   L  + E     TK  YT +I+ 
Sbjct: 537 AQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 206/418 (49%), Gaps = 2/418 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN-LRHTDIMWDLYDDIKVSETPRNVY 64
           + R+G    A  ++  ++       + TYN L+    +  +I   L    ++S  P +V 
Sbjct: 152 FCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAP-DVV 210

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + ++  LC   +L++A+  L     +E  P V++   ++   C       A  L   M
Sbjct: 211 TYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEM 270

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K G  PD  +YN+LI+G+C  G ++EA++F N+M  +G +P+ IT++I+ +      + 
Sbjct: 271 RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRW 330

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +++  +L KG  P +VT+ +LI   C+   +   + + E M   G   N ++Y+ L
Sbjct: 331 MDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPL 390

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L   C+  ++D A+  L  M + G  PD+VTY+ L+  LCK  K   A+++ N++ SK  
Sbjct: 391 LHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGC 450

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SP    +  ++ GL +      A    + +       D++ Y+ ++ G    G + EA++
Sbjct: 451 SPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIK 510

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++  +    I PS VT+N+++ G CK  + + A   L  +   G +P+  TYT  +  
Sbjct: 511 IFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 189/386 (48%), Gaps = 6/386 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRN 62
           Y ++G +  A+ V+ +M    +   + TYN++L +L  +  +    ++ D     E   +
Sbjct: 187 YCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPD 243

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T +I+I+  C  S +  A+  L E   K   P VV+ N +++  CK G  + A     
Sbjct: 244 VITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLN 303

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M  YG  P+  ++NI++  +C  G   +A     DM R G  P  +T++IL        
Sbjct: 304 NMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKR 363

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A  V++K+   G  P+ ++Y  L+ G+CQ   ++  ++  E+M+S+G   +++ Y+
Sbjct: 364 LLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYN 423

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            LL+++CK G+ D A+ +L ++ + G  P L+TY+ +I GL K  K   A +L  EM  K
Sbjct: 424 TLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRK 483

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   +  +L GL  +  + EA   F  +   +     V YN ++ G  K      A
Sbjct: 484 GLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRA 543

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGF 388
           +     ++EK   P+  T+  LI G 
Sbjct: 544 IDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 155/308 (50%), Gaps = 5/308 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNV 63
           + G + +A+  +  M     + ++ T+N +L ++  T    D    L D ++   +P +V
Sbjct: 291 KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP-SV 349

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T +I+I+ LC++  L  AI  L++       P+ +S N ++  +C+    + A     +
Sbjct: 350 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEI 409

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G +PD  +YN L+  LC  G  + A+E  N +   G  P  ITY+ +  G   + +
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 469

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A ++++++  KG  PDI+TY+ L+ G    G V+E +K+   M     K + + Y+ 
Sbjct: 470 TEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNA 529

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++  +CK+ +   A+  L  M   G KP   TY+ILI G+  +    +A++L NE+CS+ 
Sbjct: 530 IMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIADEGLAEEALELLNELCSRG 589

Query: 304 ISPNSFAH 311
               S A 
Sbjct: 590 FVKKSSAE 597


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 244/464 (52%), Gaps = 13/464 (2%)

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  +Y  LI GLC    +E+AL F   M   G  PD  TY+ +     + +++  A K +
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           +++  +   P++VTYTVLI G C+ G V+E + L   M  +      + Y+ L+S +CK+
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLISGLCKA 128

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            R  EA  LL EM   G  PD+ TY+ LI G CK  K   A++++ ++ ++   P+   +
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 312 GAILLGLCEKEMITEARMYFDSLIMS-NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
             ++ GLC++  + EA   F  +I S +C+ + V YN +I G+ ++G + EA+ L  ++ 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           E   SP +VT+ +L+ GFCK  ++ DA  LL+ +   GL P  VT+T+ M+  C E  + 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ-LLEDMYVIGVTPDQITYNTI 489
             + +L EM  K+  PT  TY  ++ G C+  +L+EA + +LE+M      P+ +++N +
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIM 365

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS--LQEH 547
           IR  CK     +A +L+ +       P    Y  +IDGLC    +  A C +    L+E 
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEA-CRVYRKMLEEP 424

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
                 + Y+T+I   C  G + +A  +    +EKG   +I  Y
Sbjct: 425 GCLPNSITYSTLITGLCNAGMLDRARGY----IEKGCVPNIGTY 464



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 254/523 (48%), Gaps = 46/523 (8%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I GLC+  RL+ A++FL    GK                               M
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFL----GK-------------------------------M 37

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G HPD ++Y  +IH LC+   + EA +F  +M    + P+ +TY++L  G     ++
Sbjct: 38  VSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRV 97

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  ++ K+  K   P  VTY  LI G C+     E   L E M+  G   ++  Y+ L
Sbjct: 98  DEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTL 156

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC-SKR 303
           ++  CKS + D+AL +  ++ A G +PD+VTYS LI GLCK+ ++ +AI L+  M  S  
Sbjct: 157 ITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS 216

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN+  + +++ G C    + EA    + +  +    DVV Y  +++G+ KL  + +A 
Sbjct: 217 CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY 276

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L  Q+  K ++P +VTF SL+ G C+  +++DA  +L  ++     P+  TY T ++ Y
Sbjct: 277 DLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 336

Query: 424 CEEGNIQRLLA-LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           C    ++     +L+EM+     P  V++ ++I+GLCK  +  EA++L+E+       PD
Sbjct: 337 CRANQLEEARKFMLEEMDCP---PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLH-NLEPTSATYNILIDGLCVNGDLKNADCLL 541
            + Y T+I   C+ K + +A ++  +M       P S TY+ LI GLC  G L  A   +
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI 453

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
                 NI      Y  +I A         A      MV++GF
Sbjct: 454 EKGCVPNIG----TYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 246/473 (52%), Gaps = 14/473 (2%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNS 67
           +  A+  + KM        + TY ++++ L    R  +    L +    + TP NV T +
Sbjct: 27  LEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTP-NVVTYT 85

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++IDGLC+  R+ +A+  L +   K+  P+ V+ N+++S  CK   A  A  L   M+  
Sbjct: 86  VLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYS 144

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  PD F+Y  LI G C +   ++AL     +   G  PD +TYS L  G     ++  A
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204

Query: 188 WKVIQKLLIKGSD-PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
             +  +++  GS  P+ VTY  LI G+C++G ++E + L E M   G   +V+ Y+ L++
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 264

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             CK  R+D+A  LL +M   GL PD+VT++ L+ GLC+++++  A+ +  EM  K  SP
Sbjct: 265 GFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 324

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
             + +  IL G C    + EAR +   L   +C  +VV +NIMI G  K+    EA++L 
Sbjct: 325 TVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELV 382

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL-DTIKLHGLEPSAVTYTTFMNAYCE 425
            +   +R +P +V + ++I G C+  KV +A R+    ++  G  P+++TY+T +   C 
Sbjct: 383 EEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCN 442

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            G + R    ++    K   P   TY ++I    K  + ++A +LL+DM   G
Sbjct: 443 AGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 147/307 (47%), Gaps = 22/307 (7%)

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           ++C  D V Y  +I G  K+  + +A+    +++ K   P + T+ ++I+  C   ++ +
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           AR+ L+ +    L P+ VTYT  ++  C+ G +   +ALL +M  K + PT VTY  +I 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLIS 123

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLCK  +  EA  LLE+M   G  PD  TY T+I  FCK K    A ++  Q+      P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 517 TSATYNILIDGLCVNGDLKNA-DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
              TY+ LIDGLC  G LK A D     ++  +     V Y ++I   C  G + +AM  
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
             +M E G    +  YT       L NGF      C++          L   ++L   M 
Sbjct: 244 LERMAETGSSPDVVTYT------TLMNGF------CKL--------ARLDDAYDLLNQMT 283

Query: 636 KSGLLPD 642
           + GL PD
Sbjct: 284 RKGLTPD 290



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 148/322 (45%), Gaps = 37/322 (11%)

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D VTY+ LI+GLCK  ++ +A+    +M SK   P+ + + A++  LC +  + EAR + 
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           +                                   ++  + ++P++VT+  LI G CK 
Sbjct: 70  E-----------------------------------EMANRNLTPNVVTYTVLIDGLCKG 94

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G+V +A  LL  ++   + P+AVTY + ++  C+         LL+EM      P   TY
Sbjct: 95  GRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTY 153

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           T +I G CK  K  +A+++ E +   G  PD +TY+ +I   CK   L++A  L  +M  
Sbjct: 154 TTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK 213

Query: 512 H-NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
             +  P + TYN LI G C  G +  A  LL  + E   S   V YTT++   C    + 
Sbjct: 214 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 273

Query: 571 KAMTFFCQMVEKGFEISIRDYT 592
            A     QM  KG    +  +T
Sbjct: 274 DAYDLLNQMTRKGLTPDVVTFT 295



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 132/268 (49%), Gaps = 10/268 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           + R G + +A+ ++ +M E      + TY +L+     L   D  +DL + +       +
Sbjct: 231 FCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + ++DGLC+++RL DA+  L E   K   P+V + N I+  YC+    E A+    
Sbjct: 291 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF-- 348

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           ++ +    P+  S+NI+I GLC      EA+E   +  R    PD + Y+ +  G     
Sbjct: 349 MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREK 408

Query: 183 QISGAWKVIQKLLIK-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           ++  A +V +K+L + G  P+ +TY+ LI G C  G ++         + +G   N+  Y
Sbjct: 409 KVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA----RGYIEKGCVPNIGTY 464

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           ++L+ +  K+ R ++A  LL +M   G 
Sbjct: 465 NLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 100/223 (44%), Gaps = 17/223 (7%)

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
           T +     VTYT +I+GLCK  +L++A+  L  M   G  PD  TY  +I + C    L 
Sbjct: 4   TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +A + L +M   NL P   TY +LIDGLC  G +  A  LL  +++  +  T V Y ++I
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLI 122

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MMLSNGFP 605
              C      +A     +MV  G    I  YT   + FC              +++ GF 
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG-LLPDKFLIN 647
           PD      ++    + G L    +L   MIKSG  +P+    N
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 160/548 (29%), Positives = 276/548 (50%), Gaps = 15/548 (2%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
           V +  G++ DAV  +A+++EL +  + +T N +L  L   R   ++  L++ +       
Sbjct: 131 VLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAP---- 186

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKG 119
           NV+T +IVID LC++  L +A         KE G  P VV+ N+++  Y K G  +  + 
Sbjct: 187 NVFTFNIVIDFLCKEGELAEARSLFSRM--KEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M + G   D  +YN LI+  C  G ME A  +   M R GV  + +T+S     F 
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               +  A K+  ++ ++G   +  TYT LI G C+ G +++ + L + M+ QG  LNV+
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+VL+  +CK  ++ EA  +L  ME  G++ + + Y+ LI G        KA+ L +EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            +K +  +   +GA++ GLC    + EA+     +  S    + ++Y  M+D   K G +
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA+ + +++++    P+++T+ +LI G CK G + +A    + ++  GL+P+   YT  
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C+ G +   + L  EM  K +    V YT ++ G  KQ  L +A  L   M   G+
Sbjct: 545 VDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             D   Y   I  FC    + +A ++ ++M  H + P  A YN LI      G+L+ A  
Sbjct: 605 QLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEA-- 662

Query: 540 LLVSLQEH 547
             +SLQ+ 
Sbjct: 663 --ISLQDE 668



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 147/587 (25%), Positives = 263/587 (44%), Gaps = 27/587 (4%)

Query: 47  MWDLYDDIKVSETPRNVYTNSIV---IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNA 103
           + DL     ++  PR     S+V   +  L  +  L DA+  +         P+  + N 
Sbjct: 103 LVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNH 162

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           I+ R  +     + + LF  +      P+ F++NI+I  LC  G + EA    + M   G
Sbjct: 163 ILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMG 218

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
             PD +T++ L  G+    ++    ++++++   G   D+VTY  LI  +C+ G +E   
Sbjct: 219 CLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAY 278

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
                M  +G   NV+ +S  + + CK G + EA+ L  +M   G+  +  TY+ LI G 
Sbjct: 279 GYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGT 338

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CK  ++  AI L +EM  + +  N   +  ++ GLC++  + EA      +  +    + 
Sbjct: 339 CKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANE 398

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           +LY  +I G+    N  +A+ L  ++  K +   I  + +LI G C   K+ +A+ LL  
Sbjct: 399 LLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTK 458

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +   GLEP+ + YTT M+A  + G +   +A+LQ++      P  +TY  +I GLCK   
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS 518

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           + EA+     M  +G+ P+   Y  ++   CK   L +A QL N+M    +      Y  
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L+DG    G+L +A  L   + +  + L    YT  I   C                   
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC------------------- 619

Query: 584 FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
             +++    +  F  M+ +G  PD+ +   ++  + + G+L     L
Sbjct: 620 -NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 233/470 (49%), Gaps = 3/470 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           + G + +A  + ++MKE+     + T+NSL+         D +  L ++++ S    +V 
Sbjct: 200 KEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVV 259

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I+  C+  R++ A  +      +    +VV+ +  +  +CK G    A  LF  M
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G+  + F+Y  LI G C AG +++A+   ++M R GV  + +TY++L  G     ++
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A  V++ +   G   + + YT LI G+    N E+ L L   M ++G +L++  Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +C   ++DEA  LL +M+  GL+P+ + Y+ ++    K  KV +AI +  ++     
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   + A++ GLC+   I EA  +F+ +       +V  Y  ++DG  K G + EAVQ
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+ +++ K +S   V + +L+ G+ K G + DA  L   +   GL+     YT F++ +C
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
               +     +  EM    I P    Y  +I    K   L+EA+ L ++M
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 3/256 (1%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A+ ++++MK   L++ I  Y +L   L N+   D    L   +  S    N    + ++D
Sbjct: 417 ALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMD 476

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
              +  ++ +AI  LQ+     F P+V++  A++   CK G  + A   F  M   GL P
Sbjct: 477 ACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDP 536

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           +  +Y  L+ GLC  G + EA++  N+M   G+  D + Y+ L  G+     +  A+ + 
Sbjct: 537 NVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALK 596

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            K++  G   D+  YT  I G+C +  + E  ++   M+  G   +   Y+ L+S   K 
Sbjct: 597 AKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKL 656

Query: 252 GRIDEALGLLYEMEAV 267
           G ++EA+ L  EME V
Sbjct: 657 GNLEEAISLQDEMERV 672


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 188/759 (24%), Positives = 338/759 (44%), Gaps = 115/759 (15%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVS 57
           +L   ++  G + DA++V  +M +   + ++++ N LL  L +  DI     ++  ++ +
Sbjct: 99  LLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCA 158

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            T  + +T +I+    C+  R+  A  FL+E        ++V+ +A+M  YC++G  EVA
Sbjct: 159 GTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVA 218

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM------------------ 159
           + L   +   GL P+  +Y +L+ G C  G MEEA +   ++                  
Sbjct: 219 RKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALIN 278

Query: 160 -----GR-------------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
                GR              GV+ +   Y+ +  G+  L ++    K++Q    +G + 
Sbjct: 279 GYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNL 338

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D  +Y  L+ GYC+ G + +  +  ++M+  GF    + Y+ LL+  C  G ID+AL L 
Sbjct: 339 DEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLW 398

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
           + M   G+ P+ ++ S L+ G  K  K  +A+ L+ E  ++ ++ N      ++ GLC+ 
Sbjct: 399 FLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKN 458

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY--------------- 366
             +TEA   F  +   +C  D + Y  +IDGY KLG++G A Q+                
Sbjct: 459 RRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMF 518

Query: 367 --------------------RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
                                ++  K +SP+ VT+ +LI G+CK G + DA  L   +  
Sbjct: 519 NSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVE 578

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM-ETKAI--------------------- 444
            GL+P+    +  ++ +  EG +     +LQ++ +T  I                     
Sbjct: 579 KGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLA 638

Query: 445 GPTH----VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
           G  H    + + +VI GLCK  ++ +A  L ED+ V G  PD  TY+++I        + 
Sbjct: 639 GGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSID 698

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
            AF L ++M    L P   TYN LI GLC + ++  A  L   LQ   IS   + Y T+I
Sbjct: 699 LAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLI 758

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFP 605
             HC +G+  +A     +M+++G + ++  YT                     M+ N   
Sbjct: 759 DGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVD 818

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           P+      ++  + + G++ ++ +L   M   GLLP  +
Sbjct: 819 PNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPANW 857



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 254/524 (48%), Gaps = 18/524 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI------MWDLYDDIKVSET 59
           Y R G +  A      M       +  TYN+LL              +W L   +K    
Sbjct: 350 YCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLM--LKRGVV 407

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N  + S ++DG  +  + + A+   +ET  +    +VV++N +++  CK      A+ 
Sbjct: 408 P-NEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEE 466

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  M ++    D+ +Y  LI G C  G +  A +   +M   G  P    ++    G  
Sbjct: 467 LFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLF 526

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           +  Q      +  ++  KG  P+ VTY  LI G+C+ GN+ +   L   M+ +G K N+ 
Sbjct: 527 IAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLF 586

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
             SVL+S   + G++DEA  +L ++    +  D    ++          + K   +   +
Sbjct: 587 ICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTL---------NIGKVAHIIESL 637

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
                         ++LGLC+   + +AR  F+ L +   I D   Y+ +I G    G+I
Sbjct: 638 AGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSI 697

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A  L  +++  R++P+IVT+NSLIYG CK+  V+ A  L + ++  G+ P+A+TY T 
Sbjct: 698 DLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTL 757

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ +C++GN      L Q+M  + I PT  TYT++I GLC Q  ++EA++LL+ M    V
Sbjct: 758 IDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNV 817

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
            P+ ITY T+I+ + +C +++   +L N+M +  L P + T ++
Sbjct: 818 DPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPANWTGHV 861



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 260/530 (49%), Gaps = 15/530 (2%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           K+F  S  S + ++  +   G  + A  +F  M K G      S N L++ L  AG +  
Sbjct: 88  KDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGT 147

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A+     M   G  PD  T +I+AK +    +++ A   ++++   G D ++V Y  ++ 
Sbjct: 148 AVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMD 207

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLK 270
           GYC+IG  E   KL   +  +G   NV+ Y++L+   CK GR++EA  ++ E+ E   + 
Sbjct: 208 GYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIV 267

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
            D V Y  LI G C++ ++  A ++ +EM    +  N F +  ++ G C+   + E    
Sbjct: 268 IDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEV--- 324

Query: 331 FDSLIMSNCIQDVVL----YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
            + L+ +N  + V L    YN ++DGY + G + +A +    ++    + + +T+N+L+ 
Sbjct: 325 -EKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLN 383

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           GFC  G + DA +L   +   G+ P+ ++ +T ++ + + G  ++ L L +E   + +  
Sbjct: 384 GFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLAR 443

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             VT   VI GLCK  ++ EA +L   M       D +TY T+I  +CK  DL +A Q+ 
Sbjct: 444 NVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIR 503

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +M      P+   +N  I GL +       + + V +    +S   V Y  +I   C E
Sbjct: 504 IEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKE 563

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
           G++H A   + +MVEKG + ++      F C +L + F  + ++ E  L+
Sbjct: 564 GNLHDACILYFEMVEKGLKPNL------FICSVLVSCFYREGKVDEANLV 607



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/436 (22%), Positives = 198/436 (45%), Gaps = 16/436 (3%)

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
           V + + F  +  ++ +LL +   +G++ +AL +  EM   G +  L + + L+  L +  
Sbjct: 84  VEVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAG 143

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
            +  A+ ++ +M      P+ F    +    C    +  A  +   +       ++V Y+
Sbjct: 144 DIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYH 203

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            ++DGY ++G    A +L   L  K +SP++VT+  L+ G+CK G++ +A +++  IK +
Sbjct: 204 AVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKEN 263

Query: 408 -GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
             +    V Y   +N YC+ G ++    +  EM    +      Y  +I G CK  ++ E
Sbjct: 264 EKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGE 323

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
             +LL+     GV  D+ +YNT++  +C+   + KAF+  + M  +    T+ TYN L++
Sbjct: 324 VEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLN 383

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           G C  G + +A  L   + +  +   +++ +T++      G   +A+  + + + +G   
Sbjct: 384 GFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLAR 443

Query: 587 SI-------------RDYTKS--FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           ++             R  T++   F  M     P D      ++  + + GDLG   ++ 
Sbjct: 444 NVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIR 503

Query: 632 AVMIKSGLLPDKFLIN 647
             M   G +P   + N
Sbjct: 504 IEMENLGFVPSVEMFN 519



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 117/248 (47%), Gaps = 11/248 (4%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVY 64
           + G V DA  +   +K         TY+SL++    +   D+ + L D++  +    N+ 
Sbjct: 658 KLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIV 717

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I GLC+   +  A+    +   K   P+ ++ N ++  +CK G    A  L   M
Sbjct: 718 TYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKM 777

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +K G+ P  F+Y ILIHGLC  G MEEA++  + M  + V+P+ ITY  L +G+     +
Sbjct: 778 IKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNM 837

Query: 185 SGAWKVIQKLLIKGSDPDIVT------YTVLICGYCQIGNVEEGLKLREV--MLSQGFKL 236
               K+  ++ I G  P   T        V+      +G+VE   K+  +    S+G  +
Sbjct: 838 KAITKLYNEMHICGLLPANWTGHVKQAEPVVNSKNLSVGHVEPDCKIIRIKNRTSEGSTV 897

Query: 237 NVIAYSVL 244
           N+ AY  L
Sbjct: 898 NLYAYYAL 905


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 160/583 (27%), Positives = 266/583 (45%), Gaps = 39/583 (6%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L DAI F           + V  N ++  + ++   +VA  L+  M    +  + +S+NI
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI------- 191
           LI   C    +  +L     + + G +PD +T++ L  G  L  +IS A  +        
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 192 --------QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
                    +++  G  P ++T+  LI G C  G V E   L   M+ +G  ++V+ Y  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +++ MCK G    AL LL +ME   +KPD+V YS +I  LCK      A  L++EM  K 
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I+PN F +  ++ G C     ++A+     +I      DV+ +N +I   VK G + EA 
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L  +++ + I P  VT+NS+IYGFCK+ +  DA+ + D +      P  VT+ T ++ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVY 442

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C    +   + LL+E+  + +     TY  +I G C+   L  A  L ++M   GV PD 
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           IT N ++  FC+ + L +A +L   + +  ++  +  YNI+I G+C    +  A  L  S
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           L  H +      Y  +I   C +  +  A   F +M +                    NG
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD--------------------NG 602

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
             PD      ++    + G++    EL + M  +G   D F I
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/540 (25%), Positives = 246/540 (45%), Gaps = 48/540 (8%)

Query: 41  LRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVS 100
           +   D+   LY  +++   P N+Y+ +I+I   C   +L  ++    +     F P VV+
Sbjct: 119 MNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVT 178

Query: 101 LNAIMSRYC----------------KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
            N ++   C                + GF E A  LF  M++ GL P   ++N LI+GLC
Sbjct: 179 FNTLLHGLCLEDRISEALALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLC 237

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
           + G + EA    N M   G+  D +TY  +  G   +     A  ++ K+      PD+V
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            Y+ +I   C+ G+  +   L   ML +G   NV  Y+ ++   C  GR  +A  LL +M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
               + PD++T++ LI    K+ K+ +A +L +EM  + I P++  + +++ G C+    
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417

Query: 325 TEARMYFD-----SLIMSNCIQDV--------------------------VLYNIMIDGY 353
            +A+  FD      ++  N I DV                            YN +I G+
Sbjct: 418 DDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            ++ N+  A  L++++I   + P  +T N L+YGFC+N K+ +A  L + I++  ++   
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           V Y   ++  C+   +     L   +    + P   TY V+I G C +  + +A  L   
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G  PD  TYNT+IR   K  ++ K+ +L+++M  +     + T  +  + +C   D
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD 657



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 242/500 (48%), Gaps = 24/500 (4%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD------------------LYDD-IKVSE 58
              K+ +L  +  + T+N+LL+ L   D + +                  L+D  +++  
Sbjct: 163 TFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGL 222

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           TP  V T + +I+GLC + R+ +A   + +  GK     VV+   I++  CK+G  + A 
Sbjct: 223 TPV-VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 281

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M +  + PD   Y+ +I  LC  G   +A    ++M   G+ P+  TY+ +  GF
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               + S A ++++ ++ +  +PD++T+  LI    + G + E  KL + ML +    + 
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y+ ++   CK  R D+A  +   M +    PD+VT++ +I   C+  +V + +QL  E
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLRE 457

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           +  + +  N+  +  ++ G CE + +  A+  F  +I      D +  NI++ G+ +   
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EA++L+  +   +I    V +N +I+G CK  KV +A  L  ++ +HG+EP   TY  
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++ +C +  I     L  +M+     P + TY  +I+G  K  ++ ++++L+ +M   G
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637

Query: 479 VTPDQITYNTIIRSFCKCKD 498
            + D  T        C+  D
Sbjct: 638 FSGDAFTIKMAEEIICRVSD 657



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/462 (23%), Positives = 205/462 (44%), Gaps = 44/462 (9%)

Query: 206 YTVLICG-----YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           YT + C      + ++   +  + L   M  +   LN+ ++++L+   C   ++  +L  
Sbjct: 104 YTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLST 163

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA---------------IQLYNEMCSKRIS 305
             ++  +G +PD+VT++ L+ GLC +D++ +A               + L+++M    ++
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P       ++ GLC +  + EA    + ++      DVV Y  +++G  K+G+   A+ L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++ E  I P +V ++++I   CK+G  +DA+ L   +   G+ P+  TY   ++ +C 
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G       LL++M  + I P  +T+  +I    K+ KL EA +L ++M    + PD +T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YN++I  FCK      A  + + M      P   T+N +ID  C    +     LL  + 
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
              +      Y T+I   C   +++ A   F +M+                    S+G  
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI--------------------SHGVC 499

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           PD   C ++L  F +   L    EL  V+  S +  D    N
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 3/219 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPR 61
           VY R   V + + ++ ++    L  +  TYN+L++     D +    DL+ ++       
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +  T +I++ G C+  +L++A+   +     +     V+ N I+   CK    + A  LF
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
           C +  +G+ PD  +YN++I G C   ++ +A    + M  +G EPD  TY+ L +G    
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
            +I  + ++I ++   G   D  T  +     C++ + E
Sbjct: 621 GEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEE 659


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 170/642 (26%), Positives = 300/642 (46%), Gaps = 58/642 (9%)

Query: 52  DDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
           + +K S  P NV     ++ GLC+  R+Q+A+               V+   ++  +C++
Sbjct: 227 EGVKASAVPYNV-----LMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
              E+A  +   M++ G  P   + + +I  L     +EEA      +G  G+ P+   Y
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + L        +   A ++ +++  +G +P+ VTY +LI   C+ G +E+ L L + M  
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +G K+ V  Y+ L++  CK G +D A GLL  M   GL P   +YS LI GLC+   +  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A++L+ EM  + I+ N++   A++ G C+ + + EA   FD +I SN I + V +N+MI+
Sbjct: 462 AMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC---------------------- 389
           GY  +GNI +A QLY Q++E  + P   T+ SLI G C                      
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVL 581

Query: 390 -------------KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
                        + G+  +   L D + + G++   V++T  + A  ++ + ++   L 
Sbjct: 582 NNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 641

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           +EM+ + + P  + YT +I  L K+  + +A+   + M + G +P+ +T+  +I + CK 
Sbjct: 642 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKS 701

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA-DCLLVSLQEHNISLTKVA 555
             L  A  L  +M   N+ P   TYN  +D     GD++ A D     LQ H  S+  V+
Sbjct: 702 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASI--VS 759

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFE-------------ISIRDYTKSF--FCMML 600
           +  +IK  C  G + +A+    ++ E GF                + D  K+F  +  ML
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             G  PD     + +   +  G+      +   MI+SG+ P+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 861



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 267/530 (50%), Gaps = 4/530 (0%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNS 67
           +V +A  +  K+ +L +  ++  YN+L+  L   +   D   L+ ++       N  T +
Sbjct: 318 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 377

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I+I  LC++  ++DA+    +   K    +V   N++++ YCK G  + A+GL   M+K 
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           GL P A SY+ LI GLC  G +  A+E   +M   G+  +  T++ L  GF    ++  A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++  K++     P+ VT+ V+I GYC +GN+ +  +L + M+  G K +   Y  L+S 
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C +  + +A   + ++E      +  + + L+ GL ++ +  +   L++EM  + +  +
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLD 617

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
             +   I+    ++    ++ + F  +       D + Y  MID   K  N+ +A+  + 
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 677

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           Q++    SP+ VT   LI   CK+G +  A  L   +    + P+  TY  F++ +  EG
Sbjct: 678 QMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEG 737

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           ++++   L   M    +    V++ ++IKGLCK  K+QEA+ L+  +   G +PD I+Y+
Sbjct: 738 DMEKAKDLHSAMLQGHLASI-VSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYS 796

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           TII   CK  D+ KAF+L N+M    L+P    YNI I    V+G+   A
Sbjct: 797 TIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKA 846



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 159/643 (24%), Positives = 288/643 (44%), Gaps = 28/643 (4%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY----NLRHTDIMWDLYDDIKVSETP 60
            Y  +  +  A  ++ +M+   +K S   YN L+Y    N+R  + +      + +  T 
Sbjct: 207 AYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTA 266

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
             V   ++V  G C+   L+ A+    +     F PS  + + ++    K    E A  L
Sbjct: 267 DEVTYRTLVY-GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL 325

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
            C +   G+ P+ F+YN LI  LC     ++A     +M   G+EP+ +TY+IL      
Sbjct: 326 ACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK 385

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              I  A  +  K+  KG    +  Y  LI GYC+ G+++    L   M+ +G      +
Sbjct: 386 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 445

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS L++ +C++G +  A+ L  EM   G+  +  T++ LI G CK  K+ +A +L+++M 
Sbjct: 446 YSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
              + PN      ++ G C    I +A   +D ++      D   Y  +I G      + 
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A +    L       +  +  +L+YG  + G+  +   L D + + G++   V++T  +
Sbjct: 566 KANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 625

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
            A  ++ + ++   L +EM+ + + P  + YT +I  L K+  + +A+   + M + G +
Sbjct: 626 YAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYS 685

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA-DC 539
           P+ +T+  +I + CK   L  A  L  +M   N+ P   TYN  +D     GD++ A D 
Sbjct: 686 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL 745

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
               LQ H  S+  V++  +IK  C  G + +A+    ++ E GF      Y+       
Sbjct: 746 HSAMLQGHLASI--VSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTII---- 799

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                    E+C++        GD+   FEL   M+  GL PD
Sbjct: 800 --------HELCKM--------GDINKAFELWNEMLYKGLKPD 826



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 151/575 (26%), Positives = 268/575 (46%), Gaps = 50/575 (8%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           L L  G+  + ++ + ++  L        A +  + M + GV  D   Y+   + +    
Sbjct: 153 LSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR 212

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            + GA  ++ ++  +G     V Y VL+ G C+   V+E ++++ VM++ G   + + Y 
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 272

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C+   ++ AL + ++M  +G  P     S +I  L K++ V +A  L  ++   
Sbjct: 273 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 332

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN FA+ A++  LC+ E   +A   F  +       + V Y I+I    K G I +A
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + L+ ++ +K I  ++  +NSLI G+CK G +  AR LL  +   GL P+A +Y+  +  
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C  G++   + L +EM  + I   + T+T +I G CK  K+ EA +L + M    V P+
Sbjct: 453 LCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           ++T+N +I  +C   ++RKAFQL +QM    L+P + TY  LI GLC+   +  A+  + 
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572

Query: 543 SLQE-----HNISLTK------------------------------VAYTTIIKAHCAEG 567
            L+      +N SLT                               V++T I+ A   + 
Sbjct: 573 DLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT-------------KSFFC--MMLSNGFPPDQEICE 612
           D  K+   F +M E+G +     YT             ++  C   M+ +G+ P+     
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHT 692

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           V++    + G LGS   L   M+   +LP+KF  N
Sbjct: 693 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 249/490 (50%), Gaps = 12/490 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETP 60
           + GM+ DA+ +  KM++  +KV++  YNSL+          R   ++  +   +K   TP
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM---VKEGLTP 441

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
               + S +I GLC+   L  A+   +E A +    +  +  A+++ +CK    + A  L
Sbjct: 442 -TAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M+   + P+  ++N++I G C+ G++ +A +  + M   G++PD  TY  L  G  L
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
            S +S A + +  L    +  +  + T L+ G  + G   E   L + M  +G KL++++
Sbjct: 561 TSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVS 620

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           +++++ +  K    +++  L  EM+  G+KPD + Y+ +I  L K++ + +A+  +++M 
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 680

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
               SPN+  H  ++  LC+   +  A +    ++  N + +   YN  +D +   G++ 
Sbjct: 681 IDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 740

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  L+  +++  ++ SIV+FN LI G CK GK+ +A  L+  I   G  P  ++Y+T +
Sbjct: 741 KAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTII 799

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C+ G+I +   L  EM  K + P  V Y + I+      +  +A+ +  +M   GV 
Sbjct: 800 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQ 859

Query: 481 PDQITYNTII 490
           P+  TY  ++
Sbjct: 860 PNWDTYRALL 869



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 136/287 (47%), Gaps = 6/287 (2%)

Query: 36  SLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAG 91
           +LLY L    R T+  + L+D++ V     ++ + +I++    +Q   + + +  +E   
Sbjct: 588 ALLYGLFREGRFTET-YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 646

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           +   P  +    ++    K      A   +  M+  G  P+  ++ +LI+ LC +G +  
Sbjct: 647 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGS 706

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A     +M    V P+  TY+     F     +  A K +   +++G    IV++ +LI 
Sbjct: 707 AELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA-KDLHSAMLQGHLASIVSFNILIK 765

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           G C+ G ++E + L   +   GF  + I+YS ++  +CK G I++A  L  EM   GLKP
Sbjct: 766 GLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKP 825

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
           D+V Y+I IR      +  KA+ +Y  M    + PN   + A+L G+
Sbjct: 826 DVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 62/115 (53%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+I GLC+  ++Q+AI  +++     F P  +S + I+   CK+G    A  L+  ML 
Sbjct: 761 NILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 820

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            GL PD  +YNI I    + G  ++AL    +M R GV+P+  TY  L  G  L+
Sbjct: 821 KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 875


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 172/601 (28%), Positives = 292/601 (48%), Gaps = 74/601 (12%)

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAI-LFLQETA--GKEFGPSVVSLNAIMSRYCKLGFAE 115
           TP +V++ + +I GLC + + Q+A+ L +  TA  G    P+VVS N ++  + K G  +
Sbjct: 159 TP-DVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVD 217

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            A  LF  M+  GL PD  +YN LI GLC A +M++A+     M   GV PD  TY+I+ 
Sbjct: 218 KAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMI 277

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
           +G+  L Q+  A ++++K+   G  PD+VTY++LI  YC+IG   E   + + M+ +G K
Sbjct: 278 RGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQK 337

Query: 236 LNVI-----------------------------------AYSVLLSSMCKSGRIDEALGL 260
            N                                     A+++L+ +  K G +D+A+  
Sbjct: 338 PNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTA 397

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN-----SFAHG--- 312
             EM   GL+PD+V+YS +I  LCK  +V  A+  +N+M S+ +SPN     S  HG   
Sbjct: 398 FTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCS 457

Query: 313 ---------------------------AILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
                                       I+  LC++  + EA+ +FD +I      DVV 
Sbjct: 458 IGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVS 517

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN +IDGY  +G + E+++   +++   + P   T+NSL+ G+ KNG+V DA  L   + 
Sbjct: 518 YNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMF 577

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
              ++  A+T    ++   + G I     L  +M  +       TY  V+ GLC+   + 
Sbjct: 578 RKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVD 637

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA+++ ED+       D  T++ +I +  K   + +A  L + M L    P   TY+++I
Sbjct: 638 EALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMI 697

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
                 G L+ +D L +S++++  +        I++    +GDV +A T+  ++ EK F 
Sbjct: 698 KSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFS 757

Query: 586 I 586
           +
Sbjct: 758 L 758



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 148/563 (26%), Positives = 280/563 (49%), Gaps = 19/563 (3%)

Query: 99  VSLNAIMSRYCKLGFAEVAKGL-FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           V+LN ++   C     + A  + F  M + G  PD FSYN LI GLC+    +EALE   
Sbjct: 127 VTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLI 186

Query: 158 DM---GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
            M   G +   P+ ++Y+ +  GF    ++  A+ +  +++ +G  PD+VTY  LI G C
Sbjct: 187 HMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLC 246

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           +   +++ + + + M  +G   +   Y++++   C  G+++EA+ LL +M   GL+PD+V
Sbjct: 247 KAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV 306

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TYS+LI+  CK  +  +A  +++ M  K   PNS  +  +L G   K  + + R   D +
Sbjct: 307 TYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 366

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           I      +   +NI+I  Y K G + +A+  + ++ +  + P +V+++++I+  CK G+V
Sbjct: 367 IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRV 426

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            DA    + +   GL P+ +++T+ ++  C  G  +++  L  EM  + I P  +    +
Sbjct: 427 EDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 486

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           +  LCK+ ++ EA    + +  IGV PD ++YNT+I  +C    + ++ + L++M    L
Sbjct: 487 MDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGL 546

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P S TYN L++G   NG +++A  L   +   ++    +    ++      G +  A  
Sbjct: 547 RPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARE 606

Query: 575 FFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFH 619
            + +MV++G ++ I  Y                   F  + S  F  D     +++ A  
Sbjct: 607 LYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALL 666

Query: 620 QGGDLGSVFELAAVMIKSGLLPD 642
           + G +     L + M+  G +PD
Sbjct: 667 KVGRIDEAKSLFSAMVLRGPVPD 689



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/588 (24%), Positives = 270/588 (45%), Gaps = 81/588 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSE 58
           + + G V  A F+  +M    L   + TYNSL+  L       +   I+  ++D   + +
Sbjct: 210 FFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPD 269

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           T     T +I+I G C   +L++A+  L++ +G    P VV+ + ++  YCK+G    A+
Sbjct: 270 T----RTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEAR 325

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSM----------------------------- 149
            +F  M++ G  P++  Y+IL+HG    G++                             
Sbjct: 326 SVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAY 385

Query: 150 ------EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
                 ++A+    +M ++G+ PD ++YS +        ++  A     +++ +G  P+I
Sbjct: 386 AKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNI 445

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           +++T LI G C IG  ++  +L   M+++G   + I  + ++ ++CK GR+ EA      
Sbjct: 446 ISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDM 505

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           +  +G+KPD+V+Y+ LI G C   K+ ++I+  + M S  + P+S+              
Sbjct: 506 VIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWT------------- 552

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
                                 YN +++GY K G + +A+ LYR++  K +    +T N 
Sbjct: 553 ----------------------YNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNI 590

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           +++G  + G++  AR L   +   G +    TY T +   CE   +   L + +++ +K 
Sbjct: 591 MLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKE 650

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
                 T+++VI  L K  ++ EA  L   M + G  PD ITY+ +I+S  +   L ++ 
Sbjct: 651 FELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESD 710

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            L   M  +     S   NI++  L   GD++ A   L  + E N SL
Sbjct: 711 NLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSL 758



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 212/483 (43%), Gaps = 54/483 (11%)

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY-EMEA 266
           +LI  +C +G ++       + L  G+++  +  + L+  +C   R D+A+ +++  M  
Sbjct: 96  ILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPE 155

Query: 267 VGLKPDLVTYSILIRGLC--------------------------------------KQDK 288
           +G  PD+ +Y+ LI+GLC                                      K+ +
Sbjct: 156 LGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGE 215

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V KA  L++EM  + + P+   + +++ GLC+ + + +A      +     + D   YNI
Sbjct: 216 VDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNI 275

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           MI GY  LG + EAV+L +++    + P +VT++ LI  +CK G+ A+AR + D++   G
Sbjct: 276 MIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKG 335

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
            +P++  Y   ++ Y  +G +  +  LL  M    I   H  + ++I    K   + +A+
Sbjct: 336 QKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAM 395

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
               +M   G+ PD ++Y+T+I   CK   +  A    NQM    L P   ++  LI GL
Sbjct: 396 TAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGL 455

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C  G+ K  + L   +    I    +   TI+   C EG V +A  FF  ++  G +  +
Sbjct: 456 CSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDV 515

Query: 589 RDYTK--SFFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             Y      +C              M+S G  PD      +L  + + G +     L   
Sbjct: 516 VSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYRE 575

Query: 634 MIK 636
           M +
Sbjct: 576 MFR 578



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 196/430 (45%), Gaps = 24/430 (5%)

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            + L   M+  G  +      +L+   C  GR+D A          G +   VT + LI+
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 282 GLCKQDKVHKAIQL-YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS--- 337
           GLC  ++   A+ + +  M     +P+ F++ A++ GLC ++   EA      +      
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
           NC  +VV YN +IDG+ K G + +A  L+ +++ + + P +VT+NSLI G CK   +  A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             +L  +   G+ P   TY   +  YC  G ++  + LL++M    + P  VTY+++I+ 
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQY 314

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
            CK  +  EA  + + M   G  P+   Y+ ++  +     L     LL+ M    +   
Sbjct: 315 YCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFE 374

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
              +NILI     +G +  A      ++++ +    V+Y+T+I   C  G V  A+  F 
Sbjct: 375 HRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFN 434

Query: 578 QMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
           QMV +G   +I  +T       L +G      +C +        G+   V ELA  MI  
Sbjct: 435 QMVSEGLSPNIISFTS------LIHG------LCSI--------GEWKKVEELAFEMINR 474

Query: 638 GLLPDKFLIN 647
           G+ PD   +N
Sbjct: 475 GIHPDAIFMN 484


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 154/548 (28%), Positives = 273/548 (49%), Gaps = 40/548 (7%)

Query: 85  FLQETAGKEF---GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           FLQ ++   F    PS+ +++  +S++ ++          C+       P    +N ++ 
Sbjct: 21  FLQNSSHSHFHSQPPSIQNVDDAVSQFNRM---------LCMRHT----PPIIQFNKILD 67

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
                     A+  ++ +   G++PD IT +IL   F  + QI+  + V+ K+L +G  P
Sbjct: 68  SFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPP 127

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D VT   LI G C  G V++ L   + +L+QGF+LN ++Y  L++ +CK G    A+ LL
Sbjct: 128 DTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLL 187

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            +++    KP++V YS +I  LCK   V +A  L++EM  K IS +   +  ++ G C +
Sbjct: 188 QKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIE 247

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             + EA    + +++     +V  YNI++D   K G + EA  +   +++  + P ++T+
Sbjct: 248 GKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITY 307

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           ++L+ G+    +V  A+ + + + L G+ P   TYT  +N +C+   +   L L +EM  
Sbjct: 308 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQ 367

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           K + P  VTY+ +I GLCK  ++     L+++M+  G   + ITY+++I   CK   L +
Sbjct: 368 KNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDR 427

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A  L N+M    + P + T+ IL+DGLC  G LK+A  +   L      L    Y  +I 
Sbjct: 428 AIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMID 487

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAF--- 618
            HC +G + +A+T   +M +                    NG  PD    E+++IA    
Sbjct: 488 GHCKQGLLEEALTMLSKMED--------------------NGCIPDAVTFEIIIIALFKK 527

Query: 619 -HQGGDLG 625
              GG++G
Sbjct: 528 DENGGNVG 535



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 245/520 (47%), Gaps = 49/520 (9%)

Query: 24  ELDLKVSIQTYNSLLYNLRHT-------------DIMWDLYDDIKVSETPRNVYTNSIVI 70
              + +SI  ++S L N  H+             D +      + +  TP  +  N I +
Sbjct: 8   RFSVSLSIPNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKI-L 66

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           D   +      A+        K   P +++LN +++ +C +G       +   +LK G  
Sbjct: 67  DSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYP 126

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG----------FHL 180
           PD  + N LI GLC+ G +++AL F + +   G + + ++Y  L  G            L
Sbjct: 127 PDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKL 186

Query: 181 LSQISG-------------------------AWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
           L +I G                         A+ +  ++ +KG   D+VTY+ LI G+C 
Sbjct: 187 LQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 246

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G ++E + L   M+ +    NV  Y++L+ ++CK G++ EA  +L  M    +KPD++T
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           YS L+ G     +V KA  ++N M    ++P+   +  ++ G C+ +M+ EA   F  + 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
             N +  +V Y+ +IDG  K G I     L  ++ ++    +++T++SLI G CKNG + 
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLD 426

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L + +K  G+ P+  T+T  ++  C+ G ++    + Q++ TK       TY V+I
Sbjct: 427 RAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
            G CKQ  L+EA+ +L  M   G  PD +T+  II +  K
Sbjct: 487 DGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFK 526



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 234/477 (49%), Gaps = 15/477 (3%)

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +  +  A     ++L     P I+ +  ++  + ++ +    + L   +  +G + ++I 
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
            ++L++  C  G+I     +L ++   G  PD VT + LI+GLC + +V KA+  ++++ 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           ++    N  ++G ++ G+C+      A      +       +VV+Y+ +ID   K   + 
Sbjct: 157 AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVS 216

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  L+ ++  K IS  +VT+++LIYGFC  GK+ +A  LL+ + L  + P+  TY   +
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +A C+EG ++   ++L  M    + P  +TY+ ++ G    +++++A  +   M ++GVT
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD  TY  +I  FCK K + +A  L  +M   N+ P   TY+ LIDGLC +G +     L
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
           +  + +       + Y+++I   C  G + +A+  F +M ++G   +   +T        
Sbjct: 397 IDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCK 456

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                  +  F  +L+ G+  +     VM+    + G L     + + M  +G +PD
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPD 513



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 176/338 (52%), Gaps = 4/338 (1%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           + L+ ++ V     +V T S +I G C + +L++AI  L E   K   P+V + N ++  
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
            CK G  + AK +  +MLK  + PD  +Y+ L+ G  +   +++A    N M   GV PD
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
             TY+IL  GF     +  A  + +++  K   P IVTY+ LI G C+ G +     L +
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLID 398

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M  +G   NVI YS L+  +CK+G +D A+ L  +M+  G++P+  T++IL+ GLCK  
Sbjct: 399 EMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGG 458

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           ++  A +++ ++ +K    N + +  ++ G C++ ++ EA      +  + CI D V + 
Sbjct: 459 RLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFE 518

Query: 348 IMIDGYVKL----GNIGEAVQLYRQLIEKRISPSIVTF 381
           I+I    K     GN+G   +++  +  K+     +TF
Sbjct: 519 IIIIALFKKDENGGNVGFDKKVWEIVEHKKGETPSITF 556



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 152/295 (51%), Gaps = 37/295 (12%)

Query: 152  ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
            A+  ++ +   G++PD  T +IL   F  + QI+  + ++ K+L +G  PD +T+T LI 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 212  GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
            G C  G V + L   + +L+QGF+LN ++Y  L++ +CK G    A+ LL +++    KP
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 272  DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
            D+V Y+ +I  LCK   V KA  L+ EM  K IS                          
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISA------------------------- 1099

Query: 332  DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
                      DVV YN +I G+  +G + EA+ L  +++ K I+P++ T+N L+   CK 
Sbjct: 1100 ----------DVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKE 1149

Query: 392  GK--VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
            GK  + ++  +L  ++ +G + +AVT+   ++A  E+    ++  LL EM  + +
Sbjct: 1150 GKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 125/245 (51%), Gaps = 2/245 (0%)

Query: 342  DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
            D+   NI+I+ +  +G I     +  +++++   P  +TF +LI G C  G+V  A    
Sbjct: 960  DLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFH 1019

Query: 402  DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
            D +   G + + V+Y T +N  C+ G+ +  + LL++++ +   P  V Y  +I  LCK 
Sbjct: 1020 DKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKH 1079

Query: 462  WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
              + +A  L  +M V G++ D +TYNT+I  FC    L++A  LLN+M L  + P   TY
Sbjct: 1080 QLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTY 1139

Query: 522  NILIDGLCVNGD--LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            NIL+D LC  G   L  +  +L  ++++      V +  II A   + +  K      +M
Sbjct: 1140 NILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEM 1199

Query: 580  VEKGF 584
            + +G 
Sbjct: 1200 IARGL 1204



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 2/247 (0%)

Query: 128  GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            G+ PD F+ NILI+  C  G +         + + G  PD IT++ L  G  L  Q++ A
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 188  WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
                 KLL +G   + V+Y  LI G C+IG+    +KL   +  +  K +V+ Y+ ++ +
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075

Query: 248  MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            +CK   + +A GL +EM   G+  D+VTY+ LI G C   K+ +AI L N+M  K I+PN
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135

Query: 308  SFAHGAILLGLCE--KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
               +  ++  LC+  K+++ E+      +  + C  + V + I+I    +     +  +L
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKL 1195

Query: 366  YRQLIEK 372
              ++I +
Sbjct: 1196 LHEMIAR 1202



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 130/255 (50%), Gaps = 2/255 (0%)

Query: 257  ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
            A+ L + +E  G++PDL T +ILI   C   ++     +  ++  +   P++     ++ 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 317  GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
            GLC K  + +A  + D L+      + V Y  +I+G  K+G+   A++L R++  +   P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 377  SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
             +V +N++I   CK+  V+ A  L   + + G+    VTY T +  +C  G ++  + LL
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 437  QEMETKAIGPTHVTYTVVIKGLCKQWK--LQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
             +M  K I P   TY +++  LCK+ K  L E++ +L  M   G   + +T+  II +  
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 495  KCKDLRKAFQLLNQM 509
            +  +  K  +LL++M
Sbjct: 1185 EKDENDKVEKLLHEM 1199



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 124/248 (50%), Gaps = 37/248 (14%)

Query: 92   KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
            K   P + +LN +++ +C +G       +   +LK G HPD  ++  LI+GLC+ G + +
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 152  ALEFTNDMGRHGVEPDAITYSILAKG----------FHLLSQISG--------------- 186
            AL F + +   G + + ++Y  L  G            LL +I G               
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 187  ----------AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
                      A+ +  ++ +KG   D+VTY  LI G+C +G ++E + L   M+ +    
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 237  NVIAYSVLLSSMCKSGR--IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
            NV  Y++L+ ++CK G+  +DE+L +L +ME  G K + VT+ I+I  L ++D+  K  +
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194

Query: 295  LYNEMCSK 302
            L +EM ++
Sbjct: 1195 LLHEMIAR 1202



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 123/279 (44%), Gaps = 18/279 (6%)

Query: 362  AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            AV L  +L  K I P + T N LI  FC  G++     +L  I   G  P  +T+TT +N
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 422  AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
              C +G + + L    ++  +      V+Y  +I G+CK    + A++LL  +      P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 482  DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
            D + YNTII + CK + + KA+ L  +M +  +     TYN LI G C+ G LK A  LL
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 542  VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
              +    I+     Y  ++ A C EG                    + D + S    M  
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGK------------------DLLDESLSMLSKMED 1166

Query: 602  NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
            NG   +    E+++ A  +  +   V +L   MI  GLL
Sbjct: 1167 NGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGLL 1205



 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 48/95 (50%)

Query: 497  KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
            K    A  L +++ L  ++P   T NILI+  C  G +     +L  + +       + +
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 557  TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
            TT+I   C +G V+KA+ F  +++ +GF+++   Y
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSY 1034


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 148/521 (28%), Positives = 248/521 (47%), Gaps = 32/521 (6%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+  S + ++         +VA  +F  ML  G+ P  F++ I++  LC+   ++ A   
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSL 240

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             DM +HG  P++I Y  L       +Q+S A K+++++ + G  PD+ T+  +I G C+
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK 300

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE------------ 263
           +  + +  KL + ML +GF  + + Y  LL  +C+ G+++EA  +L +            
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTL 360

Query: 264 --------------------MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
                               M   G +PD+ TY+IL+ GLCK+  +  A  L NEM  + 
Sbjct: 361 INGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG 420

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN   +  ++ GLC+  ++ EA +    +       + V+YN +I    +   +  A+
Sbjct: 421 CEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVAL 480

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L  ++  K   P + T+NSLIYG CK  ++ +A RL   + L G   + VTY T ++A 
Sbjct: 481 NLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHAL 540

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
              G  Q+ L L+ +M  +      +TY  +IK  CK   +++ ++L E M + G+  D 
Sbjct: 541 LRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADT 600

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           I+ N +I   CK   +  AF+ L         P   TYN +++GLC  G +K A  L   
Sbjct: 601 ISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDR 660

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           LQ   +      Y T I   C EG V+ A  FF + +E GF
Sbjct: 661 LQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGF 701



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/472 (30%), Positives = 243/472 (51%), Gaps = 9/472 (1%)

Query: 59  TPRNVYTNSIV----IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           T      NSIV    I  L Q++++ +A+  L+E       P V + N ++   CK+   
Sbjct: 245 TKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKI 304

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
             A  L   ML  G +PD  +Y  L+HGLC  G + EA +    +      P+    + L
Sbjct: 305 HDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTL 360

Query: 175 AKGFHLLSQISGAWKVIQKLLIK-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
             G+ +  Q+  A   + + +I  G  PDI TY +L+ G C+ G++     L   M  +G
Sbjct: 361 INGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG 420

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            + NVI Y++L++ +CK+G ++EA  +L+EM A GL  + V Y+ LI  LC+++KVH A+
Sbjct: 421 CEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVAL 480

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            L +EMC+K   P+ F + +++ GLC+ + I EA   F ++++   + + V YN +I   
Sbjct: 481 NLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHAL 540

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           ++ G   +A+ L   ++ +  +   +T+N LI  FCK G +     L + + + GL    
Sbjct: 541 LRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADT 600

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           ++    +N  C+ G +      L++   +   P  VTY  V+ GLCK  +++EA+ L + 
Sbjct: 601 ISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDR 660

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           + V GV PD  TYNT I   CK   +  A     +   +   P++ T+N+L+
Sbjct: 661 LQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLV 712



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 244/506 (48%), Gaps = 37/506 (7%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I++ G C Q     A     +   K   P+V +   +M   C     + A  L   M K+
Sbjct: 192 ILVTGNCPQV----ATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKH 247

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  P++  Y  LIH L     + EAL+   +M   G  PD  T++ +  G   +++I  A
Sbjct: 248 GCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDA 307

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK----------------------- 224
            K++ ++L++G  PD +TY  L+ G C+IG + E  K                       
Sbjct: 308 TKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMS 367

Query: 225 ---------LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
                    L E M++ GF+ ++  Y++L+  +CK G +  A  L+ EM   G +P+++T
Sbjct: 368 GQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVIT 427

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+IL+ GLCK   + +A  + +EM ++ ++ NS  +  ++  LC KE +  A      + 
Sbjct: 428 YAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMC 487

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C  D+  YN +I G  K+  I EA +L+  ++      + VT+N+LI+   + G   
Sbjct: 488 TKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQ 547

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L++ +   G     +TY   + A+C+ GNI++ L L ++M    +G   ++  ++I
Sbjct: 548 KALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMI 607

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLCK  K+  A + L D    G  PD +TYN+++   CK   +++A  L +++ +  + 
Sbjct: 608 NGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVR 667

Query: 516 PTSATYNILIDGLCVNGDLKNADCLL 541
           P + TYN  I   C  G + +A CL 
Sbjct: 668 PDAFTYNTFISWQCKEGMVNDA-CLF 692



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 236/499 (47%), Gaps = 26/499 (5%)

Query: 146 AGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
           AG   +A+    DM   +  EP   +Y ++ +     +    A  V   +L KG  P + 
Sbjct: 160 AGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVF 219

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           T+ +++   C    V+    L   M   G   N I Y  L+ ++ +  ++ EAL LL EM
Sbjct: 220 TFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM 279

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
             +G  PD+ T++ +I GLCK +K+H A +L + M  +   P++  +G +L GLC    +
Sbjct: 280 FVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKL 339

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ-LYRQLIEKRISPSIVTFNS 383
            EAR     LI   C  + +L N +I+GYV  G + EA   L   +I     P I T+N 
Sbjct: 340 NEARKI---LIKIPCPNNAIL-NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNI 395

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L++G CK G ++ AR L++ +   G EP+ +TY   +N  C+ G ++    +L EM  + 
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           +    V Y  +I  LC++ K+  A+ LL +M   G  PD  TYN++I   CK   + +AF
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           +L + M L      + TYN LI  L   G  + A  L+  +     +L K+ Y  +IKA 
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           C  G++ K +  + QM+                     +G   D   C +M+    + G 
Sbjct: 576 CKVGNIEKGLELYEQMI--------------------MDGLGADTISCNIMINGLCKVGK 615

Query: 624 LGSVFELAAVMIKSGLLPD 642
           + + FE     I  G +PD
Sbjct: 616 VDNAFEFLRDAINRGFVPD 634



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 236/473 (49%), Gaps = 8/473 (1%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNV 63
           S+   V +A+ ++ +M  +     +QT+N +++ L   + + D   L D + +     + 
Sbjct: 264 SQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDN 323

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEVAKGLFC 122
            T   ++ GLC+  +L +A   L +       P+   LN +++ Y   G   E    L  
Sbjct: 324 MTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQLKEAQSFLNE 379

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+ +G  PD F+YNIL+HGLC  GS+  A +  N+M R G EP+ ITY+IL  G     
Sbjct: 380 TMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAG 439

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A  V+ ++  +G   + V Y  LIC  C+   V   L L   M ++G K ++  Y+
Sbjct: 440 LLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYN 499

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +CK  RIDEA  L + M   G   + VTY+ LI  L ++    KA+ L N+M  +
Sbjct: 500 SLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFR 559

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             + +   +  ++   C+   I +    ++ +IM     D +  NIMI+G  K+G +  A
Sbjct: 560 GCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNA 619

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +  R  I +   P IVT+NS++ G CK G++ +A  L D +++ G+ P A TY TF++ 
Sbjct: 620 FEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISW 679

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
            C+EG +                P+++T+ V++  L KQ   +    +L++++
Sbjct: 680 QCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDELW 732



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 177/389 (45%), Gaps = 6/389 (1%)

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y V I     IG  +   KL   M  +G       + +++    K+G+  +A+ LL +M 
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMR 174

Query: 266 AVGL-KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           AV L +P   +Y +++  L   +    A  ++ +M SK +SP  F  G ++  LC    +
Sbjct: 175 AVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEV 234

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
             A      +    C+ + ++Y  +I    +   + EA++L  ++      P + TFN +
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I+G CK  K+ DA +L+D + L G  P  +TY   ++  C  G +     +L     K  
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL----IKIP 350

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLL-EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
            P +     +I G     +L+EA   L E M   G  PD  TYN ++   CK   L  A 
Sbjct: 351 CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFAR 410

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L+N+M     EP   TY IL++GLC  G L+ A  +L  +    +++  V Y  +I A 
Sbjct: 411 DLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICAL 470

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           C +  VH A+    +M  KG +  +  Y 
Sbjct: 471 CRKEKVHVALNLLSEMCTKGCKPDLFTYN 499


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 145/464 (31%), Positives = 244/464 (52%), Gaps = 13/464 (2%)

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  +Y  LI GLC    +E+AL F   M   G  PD  TY+ +     + +++  A K +
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           +++  +   P++VTYTVLI G C+ G V+E + L   M  +      + Y+ L+S +CK+
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLISGLCKA 128

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            R  EA  LL EM   G  PD+ TY+ LI G CK  K   A++++ ++ ++   P+   +
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 312 GAILLGLCEKEMITEARMYFDSLIMS-NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
             ++ GLC++  + EA   F  +I S +C+ + V YN +I G+ ++G + EA+ L  ++ 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           E   SP +VT+ +L+ GFCK  ++ DA  LL+ +   GL P  VT+T+ M+  C E  + 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ-LLEDMYVIGVTPDQITYNTI 489
             + +L EM  K+  PT  TY  ++ G C+  +L+EA + +LE+M      P+ +++N +
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIM 365

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS--LQEH 547
           IR  CK     +A +L+ +       P    Y  +IDGLC    +  A C +    L+E 
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEA-CRVYRKMLEEP 424

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
                 + Y+T++   C  G + +A  +    +EKG   +I  Y
Sbjct: 425 GCLPNSITYSTLVTGLCNAGMLDRARGY----IEKGCVPNIGTY 464



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 152/525 (28%), Positives = 255/525 (48%), Gaps = 46/525 (8%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I GLC+  RL+ A++FL    GK                               M
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFL----GK-------------------------------M 37

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G HPD ++Y  +IH LC+   + EA +F  +M    + P+ +TY++L  G     ++
Sbjct: 38  VSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRV 97

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  ++ K+  K   P  VTY  LI G C+     E   L E M+  G   ++  Y+ L
Sbjct: 98  DEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTL 156

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC-SKR 303
           ++  CKS + D+AL +  ++ A G +PD+VTYS LI GLCK+ ++ +AI L+  M  S  
Sbjct: 157 ITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS 216

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN+  + +++ G C    + EA    + +  +    DVV Y  +++G+ KL  + +A 
Sbjct: 217 CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY 276

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L  Q+  K ++P +VTF SL+ G C+  +++DA  +L  ++     P+  TY T ++ Y
Sbjct: 277 DLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 336

Query: 424 CEEGNIQRLLA-LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           C    ++     +L+EM+     P  V++ ++I+GLCK  +  EA++L+E+       PD
Sbjct: 337 CRANQLEEARKFMLEEMDCP---PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLH-NLEPTSATYNILIDGLCVNGDLKNADCLL 541
            + Y T+I   C+ K + +A ++  +M       P S TY+ L+ GLC  G L  A   +
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI 453

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
                 NI      Y  +I A         A      MV++GF +
Sbjct: 454 EKGCVPNIG----TYNLLIDAFRKANRDEDARELLDDMVQRGFGV 494



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 246/473 (52%), Gaps = 14/473 (2%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNS 67
           +  A+  + KM        + TY ++++ L    R  +    L +    + TP NV T +
Sbjct: 27  LEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTP-NVVTYT 85

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++IDGLC+  R+ +A+  L +   K+  P+ V+ N+++S  CK   A  A  L   M+  
Sbjct: 86  VLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYS 144

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  PD F+Y  LI G C +   ++AL     +   G  PD +TYS L  G     ++  A
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204

Query: 188 WKVIQKLLIKGSD-PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
             +  +++  GS  P+ VTY  LI G+C++G ++E + L E M   G   +V+ Y+ L++
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 264

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             CK  R+D+A  LL +M   GL PD+VT++ L+ GLC+++++  A+ +  EM  K  SP
Sbjct: 265 GFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 324

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
             + +  IL G C    + EAR +   L   +C  +VV +NIMI G  K+    EA++L 
Sbjct: 325 TVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELV 382

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL-DTIKLHGLEPSAVTYTTFMNAYCE 425
            +   +R +P +V + ++I G C+  KV +A R+    ++  G  P+++TY+T +   C 
Sbjct: 383 EEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCN 442

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            G + R    ++    K   P   TY ++I    K  + ++A +LL+DM   G
Sbjct: 443 AGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 147/307 (47%), Gaps = 22/307 (7%)

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           ++C  D V Y  +I G  K+  + +A+    +++ K   P + T+ ++I+  C   ++ +
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           AR+ L+ +    L P+ VTYT  ++  C+ G +   +ALL +M  K + PT VTY  +I 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLIS 123

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLCK  +  EA  LLE+M   G  PD  TY T+I  FCK K    A ++  Q+      P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 517 TSATYNILIDGLCVNGDLKNA-DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
              TY+ LIDGLC  G LK A D     ++  +     V Y ++I   C  G + +AM  
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
             +M E G    +  YT       L NGF      C++          L   ++L   M 
Sbjct: 244 LERMAETGSSPDVVTYT------TLMNGF------CKL--------ARLDDAYDLLNQMT 283

Query: 636 KSGLLPD 642
           + GL PD
Sbjct: 284 RKGLTPD 290



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 148/322 (45%), Gaps = 37/322 (11%)

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D VTY+ LI+GLCK  ++ +A+    +M SK   P+ + + A++  LC +  + EAR + 
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           +                                   ++  + ++P++VT+  LI G CK 
Sbjct: 70  E-----------------------------------EMANRNLTPNVVTYTVLIDGLCKG 94

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G+V +A  LL  ++   + P+AVTY + ++  C+         LL+EM      P   TY
Sbjct: 95  GRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTY 153

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           T +I G CK  K  +A+++ E +   G  PD +TY+ +I   CK   L++A  L  +M  
Sbjct: 154 TTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK 213

Query: 512 H-NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
             +  P + TYN LI G C  G +  A  LL  + E   S   V YTT++   C    + 
Sbjct: 214 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 273

Query: 571 KAMTFFCQMVEKGFEISIRDYT 592
            A     QM  KG    +  +T
Sbjct: 274 DAYDLLNQMTRKGLTPDVVTFT 295



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 132/268 (49%), Gaps = 10/268 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           + R G + +A+ ++ +M E      + TY +L+     L   D  +DL + +       +
Sbjct: 231 FCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + ++DGLC+++RL DA+  L E   K   P+V + N I+  YC+    E A+    
Sbjct: 291 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF-- 348

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           ++ +    P+  S+NI+I GLC      EA+E   +  R    PD + Y+ +  G     
Sbjct: 349 MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREK 408

Query: 183 QISGAWKVIQKLLIK-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           ++  A +V +K+L + G  P+ +TY+ L+ G C  G ++         + +G   N+  Y
Sbjct: 409 KVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA----RGYIEKGCVPNIGTY 464

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           ++L+ +  K+ R ++A  LL +M   G 
Sbjct: 465 NLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 100/223 (44%), Gaps = 17/223 (7%)

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
           T +     VTYT +I+GLCK  +L++A+  L  M   G  PD  TY  +I + C    L 
Sbjct: 4   TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +A + L +M   NL P   TY +LIDGLC  G +  A  LL  +++  +  T V Y ++I
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLI 122

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MMLSNGFP 605
              C      +A     +MV  G    I  YT   + FC              +++ GF 
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG-LLPDKFLIN 647
           PD      ++    + G L    +L   MIKSG  +P+    N
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 171/642 (26%), Positives = 300/642 (46%), Gaps = 58/642 (9%)

Query: 52  DDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
           + +K S  P NV     ++ GLC+  R+Q+A+               V+   ++  +C++
Sbjct: 227 EGVKASAVPYNV-----LMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
              E+A  +   M++ G  P   + + +I  L     +EEA      +G  G+ P+   Y
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + L        +   A ++ +++  +G +P+ VTY +LI   C+ G +E+ L L + M  
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +G K+ V  Y+ L++  CK G +D A GLL  M   GL P   +YS LI GLC+   +  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
            ++L+ EM  + I+ N++   A++ G C+ + + EA   FD +I SN I + V +N+MI+
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI-------------------------- 385
           GY  +GNI +A QLY Q++E  + P   T+ SLI                          
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVL 581

Query: 386 ---------YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
                    YGF + G+  +   L D + + G++   V++T  + A  ++ + ++   L 
Sbjct: 582 NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 641

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           +EM+ + + P  + YT +I  L K+  + +A+   + M V G +P+ +T+  +I + CK 
Sbjct: 642 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKS 701

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA-DCLLVSLQEHNISLTKVA 555
             L  A  L  +M   N+ P   TYN  +D     GD++ A D     LQ H  S+  V+
Sbjct: 702 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASI--VS 759

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFE-------------ISIRDYTKSF--FCMML 600
           +  +IK  C  G + +A+    ++ E GF                + D  K+F  +  ML
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             G  PD     + +   +  G+      +   MI+SG+ P+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 861



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 266/530 (50%), Gaps = 4/530 (0%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNS 67
           +V +A  +  K+ +L +  ++  YN+L+  L   +   D   L+ ++       N  T +
Sbjct: 318 LVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 377

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I+I  LC++  ++DA+    +   K    +V   N++++ YCK G  + A+GL   M+K 
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           GL P A SY+ LI GLC  G +   +E   +M   G+  +  T++ L  GF    ++  A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++  K++     P+ VT+ V+I GYC +GN+ +  +L + M+  G K +   Y  L+S 
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C +  + +A   + ++E      +  + + L+ G  ++ +  +   L++EM  + +  +
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 617

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
             +   I+    ++    ++ + F  +       D + Y  MID   K  N+ +A+  + 
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 677

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           Q++    SP+ VT   LI   CK+G +  A  L   +    + P+  TY  F++ +  EG
Sbjct: 678 QMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEG 737

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           ++++   L   M    +  + V++ ++IKGLCK  K+QEA+ L+  +   G +PD I+Y+
Sbjct: 738 DMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYS 796

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           TII   CK  D+ KAF+L N+M    L+P    YNI I    V+G+   A
Sbjct: 797 TIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKA 846



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 160/643 (24%), Positives = 288/643 (44%), Gaps = 28/643 (4%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY----NLRHTDIMWDLYDDIKVSETP 60
            Y  +  +  A  ++ +M+   +K S   YN L+Y    N+R  + +      + +  T 
Sbjct: 207 AYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTA 266

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
             V   ++V  G C+   L+ A+    +     F PS  + + ++    K    E A  L
Sbjct: 267 DEVTYRTLVY-GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL 325

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
            C +   G+ P+ F+YN LI  LC     ++A     +M   G+EP+ +TY+IL      
Sbjct: 326 ACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK 385

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              I  A  +  K+  KG    +  Y  LI GYC+ G+++    L   M+ +G      +
Sbjct: 386 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 445

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS L++ +C++G +   + L  EM   G+  +  T++ LI G CK  K+ +A +L+++M 
Sbjct: 446 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
              + PN      ++ G C    I +A   +D ++      D   Y  +I G      + 
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A +    L       +  +  +L+YGF + G+  +   L D + + G++   V++T  +
Sbjct: 566 KANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 625

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
            A  ++ + ++   L +EM+ + + P  + YT +I  L K+  + +A+   + M V G +
Sbjct: 626 YAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYS 685

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA-DC 539
           P+ +T+  +I + CK   L  A  L  +M   N+ P   TYN  +D     GD++ A D 
Sbjct: 686 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL 745

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
               LQ H  S+  V++  +IK  C  G + +A+    ++ E GF      Y+       
Sbjct: 746 HSAMLQGHLASI--VSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII---- 799

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                    E+C++        GD+   FEL   M+  GL PD
Sbjct: 800 --------HELCKM--------GDINKAFELWNEMLYKGLKPD 826



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 151/575 (26%), Positives = 268/575 (46%), Gaps = 50/575 (8%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           L L  G+  + ++ + ++  L        A +  + M + GV  D   Y+   + +    
Sbjct: 153 LSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR 212

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            + GA  ++ ++  +G     V Y VL+ G C+   V+E ++++ VM++ G   + + Y 
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 272

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C+   ++ AL + ++M  +G  P     S +I  L K++ V +A  L  ++   
Sbjct: 273 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 332

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN FA+ A++  LC+ E   +A   F  +       + V Y I+I    K G I +A
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + L+ ++ +K I  ++  +NSLI G+CK G +  AR LL  +   GL P+A +Y+  +  
Sbjct: 393 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C  G++   + L +EM  + I   + T+T +I G CK  K+ EA +L + M    V P+
Sbjct: 453 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           ++T+N +I  +C   ++RKAFQL +QM    L+P + TY  LI GLC+   +  A+  + 
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572

Query: 543 SLQE-----HNISLTK------------------------------VAYTTIIKAHCAEG 567
            L+      +N SLT                               V++T I+ A   + 
Sbjct: 573 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT-------------KSFFC--MMLSNGFPPDQEICE 612
           D  K+   F +M E+G +     YT             ++  C   M+ +G+ P+     
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHT 692

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           V++    + G LGS   L   M+   +LP+KF  N
Sbjct: 693 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 249/490 (50%), Gaps = 12/490 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETP 60
           + GM+ DA+ +  KM++  +KV++  YNSL+          R   ++  +   +K   TP
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM---VKEGLTP 441

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
               + S +I GLC+   L   +   +E A +    +  +  A+++ +CK    + A  L
Sbjct: 442 -TAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M+   + P+  ++N++I G C+ G++ +A +  + M   G++PD  TY  L  G  L
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
            S +S A + +  L    +  +  + T L+ G+ + G   E   L + M  +G KL++++
Sbjct: 561 TSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVS 620

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           +++++ +  K    +++  L  EM+  G+KPD + Y+ +I  L K++ + +A+  +++M 
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 680

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
               SPN+  H  ++  LC+   +  A +    ++  N + +   YN  +D +   G++ 
Sbjct: 681 VDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 740

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  L+  +++  ++ SIV+FN LI G CK GK+ +A  L+  I   G  P  ++Y+T +
Sbjct: 741 KAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 799

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C+ G+I +   L  EM  K + P  V Y + I+      +  +A+ +  +M   GV 
Sbjct: 800 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQ 859

Query: 481 PDQITYNTII 490
           P+  TY  ++
Sbjct: 860 PNWDTYRALL 869



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 1/271 (0%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           + L+D++ V     ++ + +I++    +Q   + + +  +E   +   P  +    ++  
Sbjct: 603 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDA 662

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
             K      A   +  M+  G  P+  ++ +LI+ LC +G +  A     +M    V P+
Sbjct: 663 LSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPN 722

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
             TY+     F     +  A K +   +++G    IV++ +LI G C+ G ++E + L  
Sbjct: 723 KFTYNCFLDYFATEGDMEKA-KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMS 781

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            +   GF  + I+YS ++  +CK G I++A  L  EM   GLKPD+V Y+I IR      
Sbjct: 782 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHG 841

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
           +  KA+ +Y  M    + PN   + A+L G+
Sbjct: 842 ESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 61/115 (53%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+I GLC+  ++Q+AI  + +     F P  +S + I+   CK+G    A  L+  ML 
Sbjct: 761 NILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 820

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            GL PD  +YNI I    + G  ++AL    +M R GV+P+  TY  L  G  L+
Sbjct: 821 KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 875



 Score = 40.4 bits (93), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 2/98 (2%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL   I  S    +  + S +I  LC+   +  A     E   K   P VV+ N I  R+
Sbjct: 778 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYN-IFIRW 836

Query: 109 CKL-GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
           C + G ++ A G++  M++ G+ P+  +Y  L+ G+ +
Sbjct: 837 CNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 158/558 (28%), Positives = 264/558 (47%), Gaps = 38/558 (6%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVY 64
           + G + +A+ +  KM++L +  ++ TYN ++  L      D  ++L + + V     N+ 
Sbjct: 232 KGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLK 291

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T   +I+GL + +        L E  G  F P+VV  N ++  YCK+G  E A  +  +M
Sbjct: 292 TYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVM 351

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEA-------------------------------- 152
           +   + P + +   L+ G C +  +E A                                
Sbjct: 352 ISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRY 411

Query: 153 ---LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
                FT  M      P  +  ++L  G     +   A ++  +LL KGS    VT   L
Sbjct: 412 HSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNAL 471

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G C  G + E  ++ + ML +G  ++ I Y+ L+   C  G+++    L  EM   G+
Sbjct: 472 IHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGI 531

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           +PD+ TY+ L+RGLC   K+  AI+L++E  +  +  N   +G ++ G C+   I +   
Sbjct: 532 QPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVEN 591

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
            F+ L+      + ++YNI+I  + + GN+  A+QL   +  K I P+  T++SLI+G C
Sbjct: 592 LFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 651

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
             G V DA+ L+D ++  G  P+ V YT  +  YC+ G +    +   EM +  I P   
Sbjct: 652 NIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKF 711

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TYTV+I G CK   +++A  LL  M   G+ PD +TYN +   FCK  D+  AF++ +QM
Sbjct: 712 TYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQM 771

Query: 510 WLHNLEPTSATYNILIDG 527
               L     TY  L+ G
Sbjct: 772 ATEGLPVDEITYTTLVHG 789



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 151/567 (26%), Positives = 254/567 (44%), Gaps = 70/567 (12%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V S   +++  CK G  E A  LF  M K G+ P+  +YN +I+GLC  G ++ A E 
Sbjct: 218 PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL 277

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M   GV+P+  TY  L  G   L+       ++ +++  G +P++V +  LI GYC+
Sbjct: 278 KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCK 337

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL------ 269
           +GN+E  LK+++VM+S+      +    L+   CKS +I+ A   L E+ + GL      
Sbjct: 338 MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN 397

Query: 270 -----------------------------KPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
                                        +P  +  ++L+ GLCK  K  +A +L+  + 
Sbjct: 398 CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL 457

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K    +     A++ GLC    + EA      ++      D + YN +I G+   G + 
Sbjct: 458 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE 517

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL----------- 409
              +L  ++ ++ I P I T+N L+ G C  GK+ DA +L D  K  GL           
Sbjct: 518 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 577

Query: 410 ------------------------EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
                                   E +++ Y   + A+C+ GN+   L LL+ M++K I 
Sbjct: 578 EGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL 637

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P   TY+ +I G+C    +++A  L+++M   G  P+ + Y  +I  +CK   +  A   
Sbjct: 638 PNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAEST 697

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
             +M   N+ P   TY ++IDG C  G+++ A+ LL+ ++E  I    V Y  +    C 
Sbjct: 698 WLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCK 757

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYT 592
             D+  A     QM  +G  +    YT
Sbjct: 758 ANDMDNAFKVCDQMATEGLPVDEITYT 784



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 154/562 (27%), Positives = 275/562 (48%), Gaps = 16/562 (2%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+ + N  +S   K    E    +F +M + G  PD FS+  +I+ LC  G ME A+E 
Sbjct: 184 PSLKTCNFXLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVINALCKGGKMENAIEL 242

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + G+ P+ +TY+ +  G     ++  A+++ +K+ +KG  P++ TY  LI G  +
Sbjct: 243 FMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIK 302

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +   ++   + + M+  GF  NV+ ++ L+   CK G I+ AL +   M +  + P  VT
Sbjct: 303 LNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVT 362

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
              L++G CK D++  A     E+ S  +S +     +++  LC+K     A  +   ++
Sbjct: 363 LYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMML 422

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
             N     +L  +++ G  K G   EA +L+ +L+EK    S VT N+LI+G C  GK+ 
Sbjct: 423 SRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLP 482

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A R++  +   GL    +TY   +  +C EG ++    L +EM  + I P   TY  ++
Sbjct: 483 EASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLL 542

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           +GLC   KL +A++L ++    G+  +  TY  ++  +CK   +     L N++    +E
Sbjct: 543 RGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKME 602

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
             S  YNI+I   C NG++  A  LL +++   I      Y+++I   C  G V  A   
Sbjct: 603 LNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHL 662

Query: 576 FCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
             +M ++GF  ++  YT               +S +  M+S    P++    VM+  + +
Sbjct: 663 IDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCK 722

Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
            G++     L   M +SG++PD
Sbjct: 723 LGNMEKANNLLIKMKESGIVPD 744



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/569 (25%), Positives = 259/569 (45%), Gaps = 70/569 (12%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC------------ 109
           +V++ + VI+ LC+  ++++AI    +       P+VV+ N I++  C            
Sbjct: 219 DVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELK 278

Query: 110 -----------------------KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
                                  KL F +    +   M+  G +P+   +N LI G C  
Sbjct: 279 EKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKM 338

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD------ 200
           G++E AL+  + M    + P ++T   L +GF    QI  A   ++++L  G        
Sbjct: 339 GNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNC 398

Query: 201 -----------------------------PDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
                                        P  +  T+L+CG C+ G   E  +L   +L 
Sbjct: 399 YSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLE 458

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +G   + +  + L+  +C +G++ EA  ++ EM   GL  D +TY+ LI G C + KV  
Sbjct: 459 KGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEG 518

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
             +L  EM  + I P+ + +  +L GLC    + +A   +D    S  I ++  Y IM++
Sbjct: 519 CFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMME 578

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           GY K   I +   L+ +L+ K++  + + +N +I   C+NG VA A +LL+ +K  G+ P
Sbjct: 579 GYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILP 638

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           +  TY++ ++  C  G ++    L+ EM  +   P  V YT +I G CK  ++  A    
Sbjct: 639 NCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTW 698

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            +M    + P++ TY  +I  +CK  ++ KA  LL +M    + P   TYN+L +G C  
Sbjct: 699 LEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKA 758

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTII 560
            D+ NA  +   +    + + ++ YTT++
Sbjct: 759 NDMDNAFKVCDQMATEGLPVDEITYTTLV 787



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 90/164 (54%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L +++K      N  T S +I G+C    ++DA   + E   + F P+VV   A++  YC
Sbjct: 627 LLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYC 686

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           KLG  + A+  +  M+ + +HP+ F+Y ++I G C  G+ME+A      M   G+ PD +
Sbjct: 687 KLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVV 746

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           TY++L  GF   + +  A+KV  ++  +G   D +TYT L+ G+
Sbjct: 747 TYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 3/178 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPR 61
            + + G V  A+ ++  MK   +  +  TY+SL++ + +  ++ D   L D+++      
Sbjct: 614 AHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVP 673

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   + +I G C+  ++  A     E       P+  +   ++  YCKLG  E A  L 
Sbjct: 674 NVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLL 733

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
             M + G+ PD  +YN+L +G C A  M+ A +  + M   G+  D ITY+ L  G++
Sbjct: 734 IKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGWN 791


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 159/525 (30%), Positives = 261/525 (49%), Gaps = 7/525 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
           + G + +A  +  KM    ++ +++TY +L   L  L   D +  + D++  S    NV 
Sbjct: 290 QNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVV 349

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             + +IDG C+   ++ A+        K   P+ V+L ++M  +CK    E A+     +
Sbjct: 350 VFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEI 409

Query: 125 LKYGL--HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           L  GL  HPD   Y++ +H LC       A  FT  M      P  +  ++L  G     
Sbjct: 410 LSSGLSIHPDN-CYSV-VHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDG 467

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A ++  +LL KGS    VT   LI G C  G + E  ++ + ML +G  ++ I Y+
Sbjct: 468 KHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYN 527

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C  G+++    L  EM   G++PD+ TY+ L+RGLC   K+  AI+L++E  + 
Sbjct: 528 ALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKAS 587

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +  N   +G ++ G C+   I +    F+ L+      + ++YNI+I  + + GN+  A
Sbjct: 588 GLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAA 647

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +QL   +  K I P+  T++SLI+G C  G V DA+ L+D ++  G  P+ V YT  +  
Sbjct: 648 LQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 707

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC+ G +    +   EM +  I P   TYTV+I G CK   +++A  LL  M   G+ PD
Sbjct: 708 YCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPD 767

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            +TYN +   FCK  D+  AF++ +QM    L     TY  L+ G
Sbjct: 768 VVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 155/561 (27%), Positives = 279/561 (49%), Gaps = 13/561 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVY 64
           + G + +A+ +  KM++L +  ++ TYN ++  L      D  ++L + + V     N+ 
Sbjct: 255 KGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLK 314

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T   +I+GL + +        L E  G  F P+VV  N ++  YCK+G  E A  +  +M
Sbjct: 315 TYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVM 374

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG--VEPDAITYSI---LAKGFH 179
           +   + P + +   L+ G C +  +E A     ++   G  + PD   YS+   L K F 
Sbjct: 375 ISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN-CYSVVHWLCKKFR 433

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
             S    A++  + +L +   P  +  T+L+CG C+ G   E  +L   +L +G   + +
Sbjct: 434 YHS----AFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKV 489

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
             + L+  +C +G++ EA  ++ EM   GL  D +TY+ LI G C + KV    +L  EM
Sbjct: 490 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 549

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             + I P+ + +  +L GLC    + +A   +D    S  I ++  Y IM++GY K   I
Sbjct: 550 TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 609

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +   L+ +L+ K++  + + +N +I   C+NG VA A +LL+ +K  G+ P+  TY++ 
Sbjct: 610 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 669

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C  G ++    L+ EM  +   P  V YT +I G CK  ++  A     +M    +
Sbjct: 670 IHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNI 729

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P++ TY  +I  +CK  ++ KA  LL +M    + P   TYN+L +G C   D+ NA  
Sbjct: 730 HPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFK 789

Query: 540 LLVSLQEHNISLTKVAYTTII 560
           +   +    + + ++ YTT++
Sbjct: 790 VCDQMATEGLPVDEITYTTLV 810



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 254/567 (44%), Gaps = 70/567 (12%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V S   +++  CK G  E A  LF  M K G+ P+  +YN +I+GLC  G ++ A E 
Sbjct: 241 PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL 300

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M   GV+P+  TY  L  G   L+       V+ +++  G +P++V +  LI GYC+
Sbjct: 301 KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCK 360

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL------ 269
           +GN+E  LK+++VM+S+      +    L+   CKS +I+ A   L E+ + GL      
Sbjct: 361 MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN 420

Query: 270 -----------------------------KPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
                                        +P  +  ++L+ GLCK  K  +A +L+  + 
Sbjct: 421 CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL 480

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K    +     A++ GLC    + EA      ++      D + YN +I G+   G + 
Sbjct: 481 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE 540

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL----------- 409
              +L  ++ ++ I P I T+N L+ G C  GK+ DA +L D  K  GL           
Sbjct: 541 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 600

Query: 410 ------------------------EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
                                   E +++ Y   + A+C+ GN+   L LL+ M++K I 
Sbjct: 601 EGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL 660

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P   TY+ +I G+C    +++A  L+++M   G  P+ + Y  +I  +CK   +  A   
Sbjct: 661 PNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAEST 720

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
             +M   N+ P   TY ++IDG C  G+++ A+ LL+ ++E  I    V Y  +    C 
Sbjct: 721 WLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCK 780

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYT 592
             D+  A     QM  +G  +    YT
Sbjct: 781 ANDMDNAFKVCDQMATEGLPVDEITYT 807



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 154/562 (27%), Positives = 276/562 (49%), Gaps = 16/562 (2%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+ + N ++S   K    E    +F +M + G  PD FS+  +I+ LC  G ME A+E 
Sbjct: 207 PSLKTCNFLLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVINALCKGGKMENAIEL 265

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + G+ P+ +TY+ +  G     ++  A+++ +K+ +KG  P++ TY  LI G  +
Sbjct: 266 FMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIK 325

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +   ++   + + M+  GF  NV+ ++ L+   CK G I+ AL +   M +  + P  VT
Sbjct: 326 LNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVT 385

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
              L++G CK D++  A     E+ S  +S +     +++  LC+K     A  +   ++
Sbjct: 386 LYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMML 445

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
             N     +L  +++ G  K G   EA +L+ +L+EK    S VT N+LI+G C  GK+ 
Sbjct: 446 SRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLP 505

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A R++  +   GL    +TY   +  +C EG ++    L +EM  + I P   TY  ++
Sbjct: 506 EASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLL 565

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           +GLC   KL +A++L ++    G+  +  TY  ++  +CK   +     L N++    +E
Sbjct: 566 RGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKME 625

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
             S  YNI+I   C NG++  A  LL +++   I      Y+++I   C  G V  A   
Sbjct: 626 LNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHL 685

Query: 576 FCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
             +M ++GF  ++  YT               +S +  M+S    P++    VM+  + +
Sbjct: 686 IDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCK 745

Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
            G++     L   M +SG++PD
Sbjct: 746 LGNMEKANNLLIKMKESGIVPD 767



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 90/164 (54%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L +++K      N  T S +I G+C    ++DA   + E   + F P+VV   A++  YC
Sbjct: 650 LLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYC 709

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           KLG  + A+  +  M+ + +HP+ F+Y ++I G C  G+ME+A      M   G+ PD +
Sbjct: 710 KLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVV 769

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           TY++L  GF   + +  A+KV  ++  +G   D +TYT L+ G+
Sbjct: 770 TYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 3/178 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPR 61
            + + G V  A+ ++  MK   +  +  TY+SL++ + +  ++ D   L D+++      
Sbjct: 637 AHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVP 696

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   + +I G C+  ++  A     E       P+  +   ++  YCKLG  E A  L 
Sbjct: 697 NVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLL 756

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
             M + G+ PD  +YN+L +G C A  M+ A +  + M   G+  D ITY+ L  G++
Sbjct: 757 IKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGWN 814


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 156/559 (27%), Positives = 272/559 (48%), Gaps = 36/559 (6%)

Query: 85  FLQETAGKEF---GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           FLQ ++   F    PS+ +++  +S++ +             ML     P    +N ++ 
Sbjct: 21  FLQNSSHSHFHSQPPSIQNVDDAVSQFNR-------------MLCMRHTPPIIQFNKILD 67

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
                     A+  ++ +   G++PD IT +IL   F  + QI+  + V+ K+L +G  P
Sbjct: 68  SFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPP 127

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D VT   LI G C  G V++ L   + +L+QGF+LN ++Y+ L++ +CK G    A+  L
Sbjct: 128 DTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFL 187

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            +++    KPD+V Y+ +I  +CK   V +A  L++EM  K IS +   +  ++ G C  
Sbjct: 188 RKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIV 247

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             + EA    + +++     +V  YNI++D   K G + EA  +   +++  + P ++T+
Sbjct: 248 GKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITY 307

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           ++L+ G+    +V  A+ + + + L G+ P   TYT  +N +C+   +   L L +EM  
Sbjct: 308 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQ 367

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           K + P  VTY+ +I GLCK  ++     L+++M   G   D ITY+++I   CK   L +
Sbjct: 368 KNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDR 427

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A  L N+M    + P   T+ IL+DGLC  G LK+A  +   L      L    Y  +I 
Sbjct: 428 AIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIN 487

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQG 621
            HC +G + +A+T   +M +                    NG  P+    E ++IA  + 
Sbjct: 488 GHCKQGLLEEALTMLSKMED--------------------NGCIPNAFTFETIIIALFKK 527

Query: 622 GDLGSVFELAAVMIKSGLL 640
            +     +L   MI  GLL
Sbjct: 528 DENDKAEKLLRQMIARGLL 546



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 268/531 (50%), Gaps = 14/531 (2%)

Query: 24  ELDLKVSIQTYNSLLYNLRHT-------------DIMWDLYDDIKVSETPRNVYTNSIVI 70
              + +SI  ++S L N  H+             D +      + +  TP  +  N I +
Sbjct: 8   RFSVSLSIPNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKI-L 66

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           D   +      A+        K   P +++LN +++ +C +G       +   +LK G  
Sbjct: 67  DSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYP 126

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD  + N LI GLC+ G +++AL F + +   G + + ++Y+ L  G   +     A K 
Sbjct: 127 PDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKF 186

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++K+  + + PD+V Y  +I   C+   V E   L   M  +G   +V+ Y+ L+   C 
Sbjct: 187 LRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCI 246

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++ EA+GLL EM    + P++ TY+IL+  LCK+ KV +A  +   M    + P+   
Sbjct: 247 VGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G      + +A+  F+++ +     DV  Y I+I+G+ K   + EA+ L++++ 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           +K + P IVT++SLI G CK+G+++    L+D ++  G     +TY++ ++  C+ G++ 
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 426

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           R +AL  +M+ + I P   T+T+++ GLCK  +L++A ++ +D+   G   +  TYN +I
Sbjct: 427 RAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
              CK   L +A  +L++M  +   P + T+  +I  L    +   A+ LL
Sbjct: 487 NGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLL 537



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 248/506 (49%), Gaps = 3/506 (0%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           V DAV    +M  +     I  +N +L     ++H      L   +++     ++ T +I
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+  C   ++      L +   + + P  V+LN ++   C  G  + A      +L  G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
              +  SY  LI+G+C  G    A++F   +     +PD + Y+ +         +S A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            +  ++ +KG   D+VTY  LI G+C +G ++E + L   M+ +    NV  Y++L+ ++
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK G++ EA  +L  M    +KPD++TYS L+ G     +V KA  ++N M    ++P+ 
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  ++ G C+ +M+ EA   F  +   N +  +V Y+ +IDG  K G I     L  +
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDE 399

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + ++     ++T++SLI G CKNG +  A  L + +K   + P+  T+T  ++  C+ G 
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           ++    + Q++ TK       TY V+I G CKQ  L+EA+ +L  M   G  P+  T+ T
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFET 519

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNL 514
           II +  K  +  KA +LL QM    L
Sbjct: 520 IIIALFKKDENDKAEKLLRQMIARGL 545


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 262/528 (49%), Gaps = 9/528 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPR 61
            Y R G+   A+ +  +++E   + +++ YN LL  +   +   ++  +Y ++K      
Sbjct: 123 TYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEP 182

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NVYT +I++  LC+ +R+  A   L E + K   P VVS   ++S   KLG  E A+   
Sbjct: 183 NVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAR--- 239

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              L     P+   YN LI+G C    ++E       M   G++P+ ITYS +      +
Sbjct: 240 --ELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGI 297

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A  V  K+ ++G  P++ T+T L+ GY   G V E L +   M  +GF+ NV+AY
Sbjct: 298 GNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAY 357

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+  +C  G++ EA+ +  +ME  G  P++ TY  LI G  K   +  A +++N+M +
Sbjct: 358 NTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMT 417

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               PN   + +++  LC   M ++A    + +   NC  + V +N  I G    G +  
Sbjct: 418 NGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVEC 477

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ L+ Q+ +   SP+I T+N ++ G  K  ++ +A  L+  ++  G+E + VTY T   
Sbjct: 478 AINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFG 537

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-VT 480
            +C  G  +  L LL +M    + P  +TY  +    C Q K++ A+QLL+ +   G   
Sbjct: 538 GFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWV 597

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           P+   Y +++   C    + +A   L++M    +   +AT+N L+ GL
Sbjct: 598 PEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 259/511 (50%), Gaps = 31/511 (6%)

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           +++ Y ++G AE A  +F  + ++G  P    YN L+  +      +      ++M R G
Sbjct: 120 VINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDG 179

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG- 222
            EP+  TY+IL K     +++ GA K++ ++  KG +PD+V+YT +I    ++G VEE  
Sbjct: 180 KEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAR 239

Query: 223 -----------------------LKLREV------MLSQGFKLNVIAYSVLLSSMCKSGR 253
                                   K++EV      M+ +G   NVI YS ++SS+   G 
Sbjct: 240 ELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGN 299

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           ++ AL +  +M   G  P++ T++ L++G   + +V +A+ ++N M  +   PN  A+  
Sbjct: 300 VELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNT 359

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++ GLC    + EA      +  + C  +V  Y  +IDG+ K G++  A +++ +++   
Sbjct: 360 LIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNG 419

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
             P++V + S++   C++   + A  L++ +      P+ VT+ TF+   C  G ++  +
Sbjct: 420 CIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAI 479

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            L  +ME     P   TY  V+ GL K+ +++EA++L+ +M   G+  + +TYNTI   F
Sbjct: 480 NLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGF 539

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C      +A +LL +M +  ++P + TYN L    C+ G +K A  LL  L      + +
Sbjct: 540 CNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPE 599

Query: 554 V-AYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           V AYT+++   C +  V +A+ +  +M+ +G
Sbjct: 600 VAAYTSLLWGICNQIGVEEAVLYLDKMLNEG 630



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 206/418 (49%), Gaps = 1/418 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   + +I+G C++ ++++  L L +   K   P+V++ + ++S    +G  E+A  ++
Sbjct: 248 NVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVW 307

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G  P+ +++  L+ G  + G + EAL   N M   G EP+ + Y+ L  G    
Sbjct: 308 AKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSH 367

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  V  K+   G  P++ TY  LI G+ + G++    ++   M++ G   NV+ Y
Sbjct: 368 GKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVY 427

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +++ +C+S    +A  L+ +M      P+ VT++  I+GLC   +V  AI L+ +M  
Sbjct: 428 TSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQ 487

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
              SPN   +  +L GL ++  I EA      +       ++V YN +  G+  +G   E
Sbjct: 488 YGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEE 547

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-LEPSAVTYTTFM 420
           A++L  +++   + P  +T+N+L Y +C  GKV  A +LLD +   G   P    YT+ +
Sbjct: 548 ALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLL 607

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
              C +  ++  +  L +M  + I     T+  +++GL         + +L+D+   G
Sbjct: 608 WGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDILTSG 665



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 197/417 (47%), Gaps = 20/417 (4%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   G + NV  Y++LL ++CK+ R+D A  LL EM   G +PD+V+Y+ +I  + K  K
Sbjct: 175 MKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGK 234

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V +A +L     S R  PN   + A++ G C +  + E  +    ++      +V+ Y+ 
Sbjct: 235 VEEAREL-----SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYST 289

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I     +GN+  A+ ++ ++  +  SP++ TF SL+ G+   G+V +A  + + +   G
Sbjct: 290 VISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEG 349

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
            EP+ V Y T ++  C  G +   +++  +ME     P   TY  +I G  K   L  A 
Sbjct: 350 FEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGAS 409

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           ++   M   G  P+ + Y +++   C+     +A+ L+ +M   N  P + T+N  I GL
Sbjct: 410 EIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGL 469

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C +G ++ A  L   ++++  S     Y  ++     E  + +A+    +M EKG E+++
Sbjct: 470 CCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNL 529

Query: 589 RDYTKSF--FC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
             Y   F  FC              ML  G  PD      +  A+   G + +  +L
Sbjct: 530 VTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQL 586



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 39/281 (13%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMW--DLYDDIKVSETPRNVYTN 66
           G + +AV V +KM+      ++ TY +L+    +  D++   ++++ +  +    NV   
Sbjct: 368 GKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVY 427

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +++ LC+ S    A   +++ +     P+ V+ N  +   C  G  E A  LFC M +
Sbjct: 428 TSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQ 487

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           YG  P+  +YN ++ GL     ++EALE   +M   G+E + +TY+ +  GF  + +   
Sbjct: 488 YGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEE 547

Query: 187 AWKVIQKLLIKGSDPDIVTY------------------------------------TVLI 210
           A K++ K+L+ G  PD +TY                                    T L+
Sbjct: 548 ALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLL 607

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            G C    VEE +   + ML++G  LN   ++ L+  +  S
Sbjct: 608 WGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNS 648



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/212 (20%), Positives = 89/212 (41%), Gaps = 10/212 (4%)

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
           +KA   T +TY ++I+ L ++  +     LL+ M + G++  +  +  +I ++ +     
Sbjct: 72  SKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAE 131

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +A ++  ++     +PT   YN L+D +      +  + +  +++          Y  ++
Sbjct: 132 QALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL 191

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM----------LSNGFPPDQEI 610
           KA C    V  A     +M  KG E  +  YT     M           LS  F P+  +
Sbjct: 192 KALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSV 251

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              ++  F +   +  VF L   M++ G+ P+
Sbjct: 252 YNALINGFCREYKVKEVFLLLGQMVEKGIDPN 283


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 151/516 (29%), Positives = 266/516 (51%), Gaps = 6/516 (1%)

Query: 72  GLC-QQSRLQDAILFLQE--TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           G+C +Q ++ +A+    E  + GK    +VV    +M  YCK G  + A  LF  M + G
Sbjct: 302 GVCMKQGKMLEAVKVKGEMLSCGKPM--NVVVATTLMKGYCKQGDLDSALELFDKMNENG 359

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + P+  +Y ++I   C  G+M++A E  N M    + P     + L +G+        A 
Sbjct: 360 ICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEAS 419

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           K+  + +  G   ++ TY  L+   C+ G + E   + E M+ +G + +V++Y+ ++   
Sbjct: 420 KLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGH 478

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C+ G +D A G+  EM   GLKP+L+TYS+L+ G  K+     A  LY+ M  + I+P+ 
Sbjct: 479 CQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSD 538

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F    I+ GLC+    +E++     L+    I   + YN +IDG+VK G++  A+ +Y +
Sbjct: 539 FTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTE 598

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + +  +SP++ T+ +LI GFCK+  +  A +++D +K  G+E     Y   ++ +C +G+
Sbjct: 599 MCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGD 658

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +     LL E++   + P  V Y+ +I G  K   ++ A+ L + M   G+  D   Y T
Sbjct: 659 MVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTT 718

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I    K   L  A +L  +M    + P   TY++LI GLC  G L+NA  +L  +    
Sbjct: 719 LISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKC 778

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           ++ T   Y T+I  H  EG++ +A     +M++KG 
Sbjct: 779 MTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGL 814



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 164/630 (26%), Positives = 290/630 (46%), Gaps = 53/630 (8%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +++   +  R+ DA+        K+  P +  +N  +S   K      A+ ++  M   G
Sbjct: 160 LLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKG 219

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           +  D  + +++I      G +EEA  +  +    GVE DA  YSI+ +          A 
Sbjct: 220 VKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAAL 279

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYC-QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            +++++  KG  P  V +T +I G C + G + E +K++  MLS G  +NV+  + L+  
Sbjct: 280 GLLREMRDKGWVPHEVIFTRVI-GVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKG 338

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            CK G +D AL L  +M   G+ P+ VTY+++I   CK   + KA ++YN+M +K ISP 
Sbjct: 339 YCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPT 398

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
            F   +++ G  +     EA   FD  +    I +V  YN ++    K G + EA  ++ 
Sbjct: 399 VFNVNSLIRGYLKARSPEEASKLFDEAVACG-IANVFTYNSLLSWLCKEGKMSEACSIWE 457

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           +++ K + PS+V++N++I G C+ G +  A  +   +   GL+P+ +TY+  M+ Y ++G
Sbjct: 458 KMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKG 517

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE--------------------- 466
           + +    L   M  + I P+  T  ++I GLCK  +  E                     
Sbjct: 518 DTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYN 577

Query: 467 --------------AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
                         A+ +  +M  IGV+P+  TY  +I  FCK  ++  A +++++M   
Sbjct: 578 CIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNK 637

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            +E     Y  LIDG C  GD+ NA  LL  LQE  +S  KV Y+++I       ++  A
Sbjct: 638 GIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAA 697

Query: 573 MTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIA 617
           +    +M+ +G    ++ YT                  +  ML+ G  PD     V++  
Sbjct: 698 LHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHG 757

Query: 618 FHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               G L +  ++   M +  + P  F+ N
Sbjct: 758 LCNKGQLENAQKILEDMDRKCMTPTVFIYN 787



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 148/490 (30%), Positives = 251/490 (51%), Gaps = 1/490 (0%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D   +L+D +  +    N  T +++I+  C+   +  A     +   K+  P+V ++N++
Sbjct: 346 DSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSL 405

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +  Y K    E A  LF   +  G+  + F+YN L+  LC  G M EA      M R GV
Sbjct: 406 IRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGV 464

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            P  ++Y+ +  G      +  A  V  ++L KG  P+++TY+VL+ GY + G+ E    
Sbjct: 465 RPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFG 524

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L + M  +    +    +++++ +CK+GR  E+   L ++   G  P  +TY+ +I G  
Sbjct: 525 LYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFV 584

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K+  V+ A+ +Y EMC   +SPN F +  ++ G C+   +  A    D +       DV 
Sbjct: 585 KEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVT 644

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           +Y  +IDG+ + G++  A QL  +L E  +SP+ V ++S+I GF K   +  A  L   +
Sbjct: 645 VYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRM 704

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G+      YTT ++   +EG +     L  EM  K I P  +TY+V+I GLC + +L
Sbjct: 705 INEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQL 764

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           + A ++LEDM    +TP    YNT+I    K  +L++AF+L N+M    L P   TY+IL
Sbjct: 765 ENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDIL 824

Query: 525 IDGLCVNGDL 534
           ++G   +G+L
Sbjct: 825 VNGKVKDGNL 834



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 200/392 (51%), Gaps = 38/392 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           + + G +  A  V  +M E  LK ++ TY+ L+   +    T+  + LYD ++      +
Sbjct: 478 HCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPS 537

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T +I+I+GLC+  R  ++   L++   + F P+ ++ N I+  + K G    A  ++ 
Sbjct: 538 DFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYT 597

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K G+ P+ F+Y  LI+G C + +M+ AL+  ++M   G+E D   Y  L  GF    
Sbjct: 598 EMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKG 657

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A +++ +L   G  P+ V Y+ +I G+ ++ N+E  L L + M+++G   ++  Y+
Sbjct: 658 DMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYT 717

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+S + K G++  A  L  EM A G+ PDL+TYS+LI GLC + ++  A ++  +M  K
Sbjct: 718 TLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRK 777

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            ++P  F                                   +YN +I G+ K GN+ EA
Sbjct: 778 CMTPTVF-----------------------------------IYNTLITGHFKEGNLQEA 802

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
            +L+ ++++K + P   T++ L+ G  K+G +
Sbjct: 803 FRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 38/255 (14%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + + G V+ A+ V  +M ++ +  ++ TY +L+       + D+   + D++K      +
Sbjct: 583 FVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELD 642

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA----- 117
           V     +IDG C++  + +A   L E       P+ V  ++++S + KL   E A     
Sbjct: 643 VTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHK 702

Query: 118 ------------------------------KGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
                                           L+  ML  G+ PD  +Y++LIHGLC  G
Sbjct: 703 RMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKG 762

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            +E A +   DM R  + P    Y+ L  G      +  A+++  ++L KG  PD  TY 
Sbjct: 763 QLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYD 822

Query: 208 VLICGYCQIGNVEEG 222
           +L+ G  + GN+  G
Sbjct: 823 ILVNGKVKDGNLFSG 837



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 20/244 (8%)

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           RL+++ +    E  +  +   +N+Y +   I   +     +  K I P      + +  L
Sbjct: 140 RLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSEL 199

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
            K   ++EA  +   M   GV  D  T + +IR+  +   L +A     +     +E  +
Sbjct: 200 VKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDA 259

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
             Y+I+I+ +C   D   A  LL  +++      +V +T +I     +G + +A+     
Sbjct: 260 RAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKV--- 316

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
              KG               MLS G P +  +   ++  + + GDL S  EL   M ++G
Sbjct: 317 ---KG--------------EMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENG 359

Query: 639 LLPD 642
           + P+
Sbjct: 360 ICPN 363


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 229/399 (57%), Gaps = 3/399 (0%)

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           F  S++S N ++S   K       + ++  M+K  +  +  S+NI+++GLC  G +  A 
Sbjct: 116 FKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAG 175

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK---VIQKLLIKGSDPDIVTYTVLI 210
           +   DM   GV P+ ITY+ L  G+  + +I   +K   ++++++ KG  P+ VTY +LI
Sbjct: 176 DVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILI 235

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G+C+  NV   +++   M  QG + NV+ Y++L++ +C  G++DEA+ L  +M +  L+
Sbjct: 236 DGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLE 295

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P++VT+++LI G CK   V++AI L+N+M  + + PN+  +  ++   C+   + +A   
Sbjct: 296 PNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFAL 355

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           ++ +I      +V  YN +I G  + G++  A  L  +++ K++S  +VT+N LI   CK
Sbjct: 356 YNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCK 415

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G+   A +LLD +   GL PS VTY T M+ YC EGN++  L +   ME K      VT
Sbjct: 416 KGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVT 475

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           + V+IKG C + +L++A  LL +M   G+ P++ TY  I
Sbjct: 476 HNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 218/384 (56%), Gaps = 4/384 (1%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD- 287
           M+ +  +LNVI+++++++ +CK G+++ A  ++ +M+  G+ P+++TY+ LI G CK   
Sbjct: 146 MIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGR 205

Query: 288 --KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
             K++KA  +  EM +K I PN   +  ++ G C+ E ++ A   F  +       +VV 
Sbjct: 206 IGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVT 265

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YNI+I+G    G + EAV L  Q++   + P++VT N LI GFCKN  V +A  L + ++
Sbjct: 266 YNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDME 325

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             G++P+A+TYTT ++AYC++G ++   AL   M  + I P   TY  +I GLC++  ++
Sbjct: 326 KQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVK 385

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
            A  L+ +M    ++ D +TYN +I S CK  + RKA +LL++M+   L P+  TYN L+
Sbjct: 386 AARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLM 445

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           DG C  G+L+ A  +   ++        V +  +IK  C +G +  A     +M+E+G  
Sbjct: 446 DGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGL- 504

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQE 609
           +  R   +     M+  GF PD E
Sbjct: 505 VPNRTTYEIIKEEMMEKGFVPDIE 528



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 217/402 (53%), Gaps = 5/402 (1%)

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFT-NDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           YG      S N L+ GL +  S    +EF   +M +  +E + I+++I+  G   + +++
Sbjct: 114 YGFKLSLISCNPLLSGL-VKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLN 172

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV---MLSQGFKLNVIAYS 242
            A  VI+ + + G  P+++TY  LI GYC++G + +  K   +   M+++G   N + Y+
Sbjct: 173 RAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYN 232

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L+   CK   +  A+ +  EM+  GL+P++VTY+ILI GLC   KV +A+ L ++M S 
Sbjct: 233 ILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSS 292

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN   H  ++ G C+ + + EA   F+ +       + + Y  +ID Y K G + +A
Sbjct: 293 DLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDA 352

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             LY  +I++ I P + T+N LI G C+ G V  AR L++ +    L    VTY   +++
Sbjct: 353 FALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDS 412

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C++G  ++ + LL EM  K + P+HVTY  ++ G C++  L+ A+ +   M   G   +
Sbjct: 413 LCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQAN 472

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            +T+N +I+ FC    L  A  LLN+M    L P   TY I+
Sbjct: 473 VVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 233/428 (54%), Gaps = 19/428 (4%)

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
           G +G +   I+ + L  G    S+      V ++++ +  + +++++ +++ G C++G +
Sbjct: 112 GDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKL 171

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE---ALGLLYEMEAVGLKPDLVTY 276
                + E M   G   NVI Y+ L+   CK GRI +   A  +L EM A G+ P+ VTY
Sbjct: 172 NRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTY 231

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +ILI G CK + V  A++++ EM  + + PN   +  ++ GLC    + EA    D ++ 
Sbjct: 232 NILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVS 291

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           S+   +VV +N++I+G+ K   + EA+ L+  + ++ + P+ +T+ +LI  +CK+G++ D
Sbjct: 292 SDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMED 351

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  L + +   G+ P   TY   +   C +G+++   +L+ EM +K +    VTY ++I 
Sbjct: 352 AFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILID 411

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
            LCK+ + ++AV+LL++M+  G+ P  +TYNT++  +C+  +LR A  +  +M     + 
Sbjct: 412 SLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQA 471

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              T+N+LI G C+ G L++A+ LL  + E  +   +  Y  IIK               
Sbjct: 472 NVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTY-EIIKE-------------- 516

Query: 577 CQMVEKGF 584
            +M+EKGF
Sbjct: 517 -EMMEKGF 523



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 223/460 (48%), Gaps = 41/460 (8%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDL---YDDIKVS 57
           ML   + R   +        +  +   K+S+ + N LL  L       D+   Y ++   
Sbjct: 90  MLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKR 149

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV- 116
           +   NV + +IV++GLC+  +L  A   +++       P+V++ N ++  YCK+G     
Sbjct: 150 KIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKM 209

Query: 117 --AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
             A  +   M+  G+ P+  +YNILI G C   ++  A+    +M R G+ P+ +TY+IL
Sbjct: 210 YKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNIL 269

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G     ++  A  +  +++    +P++VT+ VLI G+C+   V E + L   M  QG 
Sbjct: 270 INGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGV 329

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             N + Y+ L+ + CK GR+++A  L   M   G+ P++ TY+ LI GLC++  V  A  
Sbjct: 330 DPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARS 389

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L NEM SK++S                                    DVV YNI+ID   
Sbjct: 390 LMNEMVSKKLSA-----------------------------------DVVTYNILIDSLC 414

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K G   +AV+L  ++ EK ++PS VT+N+L+ G+C+ G +  A  +   ++  G + + V
Sbjct: 415 KKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVV 474

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
           T+   +  +C +G ++    LL EM  + + P   TY ++
Sbjct: 475 THNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 210/441 (47%), Gaps = 47/441 (10%)

Query: 190 VIQKLLIKGSDPDIV-------------------TYTVLICGYCQIGNVEEGLKLREV-- 228
           ++Q+LL  G+DP+++                   T+ +L      + + ++  K+R    
Sbjct: 1   LLQQLLNSGADPELILRYFTWSQKEFKLSHSLELTFRIL----NSLAHTKKYSKIRSFLD 56

Query: 229 -------------------MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
                              M    F +N I   +L+ +  ++ +I             G 
Sbjct: 57  KFVKYEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGF 116

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           K  L++ + L+ GL K+ +      +Y EM  ++I  N  +   ++ GLC+   +  A  
Sbjct: 117 KLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGD 176

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG---EAVQLYRQLIEKRISPSIVTFNSLIY 386
             + + +     +V+ YN +IDGY K+G IG   +A  + ++++ K I P+ VT+N LI 
Sbjct: 177 VIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILID 236

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           GFCK+  V+ A R+   ++  GL P+ VTY   +N  C +G +   +AL  +M +  + P
Sbjct: 237 GFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEP 296

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             VT+ V+I G CK   + EA+ L  DM   GV P+ +TY T+I ++CK   +  AF L 
Sbjct: 297 NVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALY 356

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           N M    + P  +TYN LI GLC  GD+K A  L+  +    +S   V Y  +I + C +
Sbjct: 357 NMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKK 416

Query: 567 GDVHKAMTFFCQMVEKGFEIS 587
           G+  KA+    +M EKG   S
Sbjct: 417 GESRKAVKLLDEMFEKGLNPS 437



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 136/265 (51%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T +I+I+GLC   ++ +A+    +    +  P+VV+ N +++ +CK      A  LF
Sbjct: 262 NVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLF 321

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M K G+ P+A +Y  LI   C  G ME+A    N M   G+ P+  TY+ L  G    
Sbjct: 322 NDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRK 381

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A  ++ +++ K    D+VTY +LI   C+ G   + +KL + M  +G   + + Y
Sbjct: 382 GDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTY 441

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C+ G +  AL +   ME  G + ++VT+++LI+G C + ++  A  L NEM  
Sbjct: 442 NTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLE 501

Query: 302 KRISPNSFAHGAILLGLCEKEMITE 326
           + + PN   +  I   + EK  + +
Sbjct: 502 RGLVPNRTTYEIIKEEMMEKGFVPD 526



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 147/317 (46%), Gaps = 18/317 (5%)

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           +L ++++  +V+   I    + +++  +     S+++ N L+ G  K  +  D   +   
Sbjct: 86  ILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYRE 145

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ-- 461
           +    +E + +++   +N  C+ G + R   ++++M+   + P  +TY  +I G CK   
Sbjct: 146 MIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGR 205

Query: 462 -WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             K+ +A  +L++M   G+ P+++TYN +I  FCK +++  A ++  +M    L P   T
Sbjct: 206 IGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVT 265

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           YNILI+GLC +G +  A  L   +   ++    V +  +I   C    V++A+  F  M 
Sbjct: 266 YNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDME 325

Query: 581 EKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
           ++G + +   YT                + + MM+  G  P+      ++    + GD+ 
Sbjct: 326 KQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVK 385

Query: 626 SVFELAAVMIKSGLLPD 642
           +   L   M+   L  D
Sbjct: 386 AARSLMNEMVSKKLSAD 402



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 3/253 (1%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G V +AV +  +M   DL+ ++ T+N L+      +  +   +L++D++      N  T 
Sbjct: 277 GKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTY 336

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +ID  C+  R++DA         +   P V + N +++  C+ G  + A+ L   M+ 
Sbjct: 337 TTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVS 396

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             L  D  +YNILI  LC  G   +A++  ++M   G+ P  +TY+ L  G+     +  
Sbjct: 397 KKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRA 456

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  V  ++  KG   ++VT+ VLI G+C  G +E+   L   ML +G   N   Y ++  
Sbjct: 457 ALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKE 516

Query: 247 SMCKSGRIDEALG 259
            M + G + +  G
Sbjct: 517 EMMEKGFVPDIEG 529


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 165/548 (30%), Positives = 277/548 (50%), Gaps = 19/548 (3%)

Query: 85  FLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
           FL E +G  FG S+ S N ++ +  K    E A+ L+  ML  G+ P   ++N LI+ L 
Sbjct: 150 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 209

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
             G + EA    + + ++ + PD  TY+ L  G      +  A+ V  +++ +G DP+ V
Sbjct: 210 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TY+ LI G C  G V+E L + E M+ +G +  V  Y++ ++++C     +EA+ L+  M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           +  G +P++ TY+ LI GL +  K+  AI LY++M  + + PN+  + A++  LC     
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
           + A   F  +     + +   YN +I G    G+I +A+ L+ ++++    P++VT+N+L
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G+   G V +A RLLD +K +G EP   TY   ++ + + G ++      QEM    +
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  V+YT +I G  K  K+  A+ LL+ M  +G  P+  +YN +I    K     +A +
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           + ++M    L P   TY  LIDGLC NG  + A  +   +++         Y+++I   C
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQE 609
            EG   +A     +M E G E ++  Y+   S  C              M   GF PD+E
Sbjct: 630 QEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 685

Query: 610 ICEVMLIA 617
           I   +LIA
Sbjct: 686 IYYSLLIA 693



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 161/631 (25%), Positives = 306/631 (48%), Gaps = 22/631 (3%)

Query: 30  SIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           S+ + N+LL  L   +++    +LY  +  S    ++ T + +I+ L ++ ++++A L L
Sbjct: 162 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELIL 221

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            +    +  P V +  +++  +C+    ++A G+F  M+K G  P++ +Y+ LI+GLC  
Sbjct: 222 SQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNE 281

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G ++EAL+   +M   G+EP   TY++       +     A +++ ++  +G  P++ TY
Sbjct: 282 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTY 341

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T LI G  ++G +E  + L   ML +G   N + Y+ L++ +C  GR   AL + + ME 
Sbjct: 342 TALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG 401

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G   +  TY+ +I+GLC    + KA+ L+ +M      P    +  ++ G   K  +  
Sbjct: 402 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNN 461

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A    D +  + C  D   YN ++ G+ K G +  A   +++++E  ++P+ V++ +LI 
Sbjct: 462 AARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALID 521

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G  K+GKV  A  LL  ++  G  P+  +Y   +N   +E        +  +M  + + P
Sbjct: 522 GHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLP 581

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             +TYT +I GLC+  + Q A ++  DM      P+  TY+++I   C+     +A    
Sbjct: 582 NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA---- 637

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +M     EPT  TY+ L+ GLC  G    A+ L+  ++E      +  Y +++ AHC  
Sbjct: 638 ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKN 697

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEIC 611
            +V  A+  F  +  KGF++ +  Y                ++ F  ML   +  D+ + 
Sbjct: 698 LEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVW 757

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            V++    + G+L    +L  +M      P+
Sbjct: 758 TVLVDGLLKEGELDLCMKLLHIMESKNFTPN 788



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/590 (26%), Positives = 287/590 (48%), Gaps = 7/590 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
           + S+ G V +A  +++++ + DL   + TY SL+      R+ D+ + ++D +       
Sbjct: 207 ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDP 266

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T S +I+GLC + R+ +A+  L+E   K   P+V +    ++  C +   E A  L 
Sbjct: 267 NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 326

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M K G  P+  +Y  LI GL   G +E A+   + M + G+ P+ +TY+ L     + 
Sbjct: 327 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVG 386

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            + S A K+   +   GS  +  TY  +I G C  G++E+ + L E ML  G    V+ Y
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 446

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L++     G ++ A  LL  M+  G +PD  TY+ L+ G  K  K+  A   + EM  
Sbjct: 447 NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE 506

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             ++PN  ++ A++ G  +   +  A      +    C  +V  YN +I+G  K     E
Sbjct: 507 CGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSE 566

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A ++  +++E+ + P+++T+ +LI G C+NG+   A ++   ++     P+  TY++ + 
Sbjct: 567 AEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 626

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+EG         + M      PT  TY+ ++ GLC++ +  EA QL++DM   G  P
Sbjct: 627 GLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCP 682

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D+  Y +++ + CK  ++  A ++ + +     +   + Y  LI  LC  G ++ A  L 
Sbjct: 683 DREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALF 742

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
            ++ E   +  ++ +T ++     EG++   M     M  K F  +I+ Y
Sbjct: 743 DNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 225/498 (45%), Gaps = 42/498 (8%)

Query: 18  VIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           ++A+MK+   + ++QTY +L   L  L   ++   LY  +       N  T + +I+ LC
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
              R   A+       G     +  + N I+   C  G  E A  LF  MLK G  P   
Sbjct: 385 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +YN LI+G    G++  A    + M  +G EPD  TY+ L  GF    ++  A    Q++
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           +  G +P+ V+YT LI G+ + G V+  L L + M   G   NV +Y+ +++ + K  R 
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRF 564

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            EA  +  +M   GL P+++TY+ LI GLC+  +   A +++++M  ++  PN + + ++
Sbjct: 565 SEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + GLC++    EA    + +    C   +  Y+ ++ G  + G   EA QL + + E+  
Sbjct: 625 IYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF 680

Query: 375 SPS-----------------------------------IVTFNSLIYGFCKNGKVADARR 399
            P                                    +  + +LI   CK G+V +A+ 
Sbjct: 681 CPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQA 740

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L D +         + +T  ++   +EG +   + LL  ME+K   P   TY ++ + L 
Sbjct: 741 LFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELS 800

Query: 460 KQWKLQEAVQLLEDMYVI 477
           +  K  E+  L + + V+
Sbjct: 801 RIGKSIESEPLADKLKVL 818



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 177/380 (46%), Gaps = 15/380 (3%)

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           ++I+    ++++ +     NE+       + ++   +L+ L + EM+  AR  +  ++ S
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
                ++ +N +I+   K G + EA  +  Q+ +  +SP + T+ SLI G C+N  +  A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             + D +   G +P++VTY+T +N  C EG +   L +L+EM  K I PT  TYT+ I  
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LC     +EA++L+  M   G  P+  TY  +I    +   L  A  L ++M    L P 
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
           + TYN LI+ LCV G    A  +   ++ H        Y  IIK  C  GD+ KAM  F 
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 578 QMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           +M++ G   ++  Y                     +M  NG  PD+     ++  F + G
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492

Query: 623 DLGSVFELAAVMIKSGLLPD 642
            L S       M++ GL P+
Sbjct: 493 KLESASFYFQEMVECGLNPN 512



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 200/403 (49%), Gaps = 13/403 (3%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLY------NLRHTDIMWDLYDDIKVSETPRNV 63
           G +  A+ +  KM ++    ++ TYN+L+       N+ +   + DL   +K +    + 
Sbjct: 422 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL---MKENGCEPDE 478

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T + ++ G  +  +L+ A  + QE       P+ VS  A++  + K G  ++A  L   
Sbjct: 479 WTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKR 538

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M + G +P+  SYN +I+GL       EA +  + M   G+ P+ ITY+ L  G     +
Sbjct: 539 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGR 598

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A+K+   +  +   P++ TY+ LI G CQ G  +E  ++ E+    G +  +  YS 
Sbjct: 599 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEI----GCEPTLDTYST 654

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+S +C+ GR  EA  L+ +M+  G  PD   Y  L+   CK  +V  A+++++ + +K 
Sbjct: 655 LVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKG 714

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
              +   + A++  LC+   + EA+  FD+++      D +++ +++DG +K G +   +
Sbjct: 715 FQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCM 774

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           +L   +  K  +P+I T+  L     + GK  ++  L D +K+
Sbjct: 775 KLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKV 817



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 128/294 (43%), Gaps = 27/294 (9%)

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN----GKVADARRLLDTIKLHGLEPSA 413
           N+   + +  +L+  R+         L+   C+N     +VAD    L+ I   G   S 
Sbjct: 107 NMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVAD---FLNEISGMGFGFSL 163

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            +  T +    +   ++    L ++M    I P+ +T+  +I  L K+ K++EA  +L  
Sbjct: 164 YSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQ 223

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           ++   ++PD  TY ++I   C+ ++L  AF + ++M     +P S TY+ LI+GLC  G 
Sbjct: 224 IFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGR 283

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           +  A  +L  + E  I  T   YT  I A CA     +A+    +M ++G   +++ YT 
Sbjct: 284 VDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT- 342

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                               ++    + G L     L   M+K GL+P+    N
Sbjct: 343 -------------------ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYN 377


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 246/480 (51%), Gaps = 20/480 (4%)

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G+ P+  T +IL   F  L ++   + V+ K +  G  P IVT+T LI G  ++G   + 
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           ++L + M+++G + +   Y+ +++ +CK G    A GL  +ME  G + ++VTYS LI  
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           LCK  +V++A+ +++ M +K ISP  F + +++ GLC      EA    + +   N + +
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           VV +N+++D + K G +  A  + + + E  + P +VT+NSL+YG+    +V +AR+L D
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G +P   +Y+  +N YC+   I     L  EM  +   P +V+Y  +I GLC+  
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLG 304

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           +L+EA  L ++M+  G  P+  TY  ++  FCK   L KAF+L   M    L+P    YN
Sbjct: 305 RLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYN 364

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           IL++ +C +G+LK+A  L   L    +      YTTII   C EG + +A+  F  M + 
Sbjct: 365 ILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMED- 423

Query: 583 GFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                              +G PPD+    V++  F Q  D      L   M   G + D
Sbjct: 424 -------------------DGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 244/465 (52%), Gaps = 12/465 (2%)

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKL-----GFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
           E AG    P+  +LN +++ +C+L     GF+ +AKG+     K GL P   ++  LI+G
Sbjct: 2   ELAG--LSPNTCTLNILINCFCQLQRVDLGFSVLAKGI-----KLGLQPTIVTFTTLING 54

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           L   G   +A+E  +DM   G +PD  TY+ +  G   + + + A  + +K+   G   +
Sbjct: 55  LGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLN 114

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           +VTY+ LI   C+   V E L +   M ++     +  Y+ L+  +C   R  EA  LL 
Sbjct: 115 VVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLN 174

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           EM ++ + P++VT+++L+   CK+ KV  A  +   M    + P+   + +++ G     
Sbjct: 175 EMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWT 234

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            + EAR  FD +I   C  DV  Y+I+I+GY K   I EA QL+ ++I +  +P+ V++N
Sbjct: 235 EVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYN 294

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           +LI+G C+ G++ +A+ L   +  +G  P+  TY   ++ +C++G + +   L + M++ 
Sbjct: 295 TLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQST 354

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P  V Y +++  +CK   L++A +L  +++VIG+ P+   Y TII   CK   L +A
Sbjct: 355 YLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEA 414

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            +    M      P   +YN++I G   + D   A  L+  +++ 
Sbjct: 415 LEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDR 459



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 227/448 (50%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T +I+I+  CQ  R+      L +       P++V+   +++   K+G    A  LF
Sbjct: 9   NTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELF 68

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G  PD ++Y  +I+GLC  G    A      M   G + + +TYS L       
Sbjct: 69  DDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKY 128

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +++ A  +   +  K   P I TYT LI G C     +E   L   M S     NV+ +
Sbjct: 129 RRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTF 188

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+ + CK G++  A G+L  M  +G++PD+VTY+ L+ G     +V +A +L++ M +
Sbjct: 189 NVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMIT 248

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   P+ F++  ++ G C+ + I EA+  F+ +I      + V YN +I G  +LG + E
Sbjct: 249 KGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLRE 308

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L++ +      P++ T+  L+ GFCK G +  A RL   ++   L+P+ V Y   +N
Sbjct: 309 AQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVN 368

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           A C+ GN++    L  E+    + P    YT +I GLCK+  L EA++   +M   G  P
Sbjct: 369 AMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPP 428

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           D+ +YN IIR F + KD  +A  L+ +M
Sbjct: 429 DEFSYNVIIRGFLQHKDESRAVHLIGEM 456



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 221/436 (50%), Gaps = 1/436 (0%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L   IK+   P  + T + +I+GL +  +   A+    +   +   P   +   I++  C
Sbjct: 33  LAKGIKLGLQP-TIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLC 91

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           K+G   +A GLF  M + G   +  +Y+ LIH LC    + EAL+  + M    + P   
Sbjct: 92  KIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIF 151

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           TY+ L +G    S+   A  ++ ++      P++VT+ VL+  +C+ G V     + + M
Sbjct: 152 TYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTM 211

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
              G + +V+ Y+ L+        + EA  L   M   G KPD+ +YSILI G CK  ++
Sbjct: 212 TEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRI 271

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A QL+NEM  +  +PN+ ++  ++ GLC+   + EA+  F ++  +  + ++  Y I+
Sbjct: 272 DEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAIL 331

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           +DG+ K G +G+A +L+R +    + P++V +N L+   CK+G + DAR L   + + GL
Sbjct: 332 LDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGL 391

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           +P+   YTT +N  C+EG +   L   + ME     P   +Y V+I+G  +      AV 
Sbjct: 392 QPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVH 451

Query: 470 LLEDMYVIGVTPDQIT 485
           L+ +M   G   D  T
Sbjct: 452 LIGEMRDRGFITDAGT 467



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 222/432 (51%), Gaps = 7/432 (1%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRNVYTNSIVIDGLC 74
           V+AK  +L L+ +I T+ +L+  L          +L+DD+       + YT + +I+GLC
Sbjct: 32  VLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLC 91

Query: 75  Q--QSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           +  ++ L   +    E AG +   +VV+ + ++   CK      A  +F  M    + P 
Sbjct: 92  KIGETALAAGLFKKMEEAGCQL--NVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPT 149

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
            F+Y  LI GLC     +EA    N+M    + P+ +T+++L   F    ++  A  V++
Sbjct: 150 IFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLK 209

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
            +   G +PD+VTY  L+ GY     V E  KL +VM+++G K +V +YS+L++  CK+ 
Sbjct: 210 TMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAK 269

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           RIDEA  L  EM   G  P+ V+Y+ LI GLC+  ++ +A  L+  M +    PN + + 
Sbjct: 270 RIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYA 329

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            +L G C++  + +A   F ++  +    ++V+YNI+++   K GN+ +A +L+ +L   
Sbjct: 330 ILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVI 389

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            + P++  + ++I G CK G + +A      ++  G  P   +Y   +  + +  +  R 
Sbjct: 390 GLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRA 449

Query: 433 LALLQEMETKAI 444
           + L+ EM  +  
Sbjct: 450 VHLIGEMRDRGF 461



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 198/368 (53%), Gaps = 3/368 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G    A  +  KM+E   ++++ TY++L+++L   R  +   D++  +K  +    ++
Sbjct: 92  KIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIF 151

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I GLC  SR ++A   L E       P+VV+ N ++  +CK G    A+G+   M
Sbjct: 152 TYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTM 211

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G+ PD  +YN L++G  +   + EA +  + M   G +PD  +YSIL  G+    +I
Sbjct: 212 TEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRI 271

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++  +++ +GS P+ V+Y  LI G CQ+G + E   L + M + G   N+  Y++L
Sbjct: 272 DEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAIL 331

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L   CK G + +A  L   M++  LKP+LV Y+IL+  +CK   +  A +L++E+    +
Sbjct: 332 LDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGL 391

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   +  I+ GLC++ ++ EA   F ++    C  D   YN++I G+++  +   AV 
Sbjct: 392 QPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVH 451

Query: 365 LYRQLIEK 372
           L  ++ ++
Sbjct: 452 LIGEMRDR 459



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 200/412 (48%), Gaps = 3/412 (0%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNV 63
            + G    AV +   M     +    TY +++  L     T +   L+  ++ +    NV
Sbjct: 56  GKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNV 115

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T S +I  LC+  R+ +A+        K+  P++ +  +++   C     + A  L   
Sbjct: 116 VTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNE 175

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M    + P+  ++N+L+   C  G +  A      M   GVEPD +TY+ L  G+ + ++
Sbjct: 176 MTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTE 235

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A K+   ++ KG  PD+ +Y++LI GYC+   ++E  +L   M+ QG   N ++Y+ 
Sbjct: 236 VVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNT 295

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +C+ GR+ EA  L   M   G  P+L TY+IL+ G CKQ  + KA +L+  M S  
Sbjct: 296 LIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTY 355

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + PN   +  ++  +C+   + +AR  F  L +     +V +Y  +I+G  K G + EA+
Sbjct: 356 LKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEAL 415

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           + +R + +    P   ++N +I GF ++   + A  L+  ++  G    A T
Sbjct: 416 EAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 183/415 (44%), Gaps = 55/415 (13%)

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   N    ++L++  C+  R+D    +L +   +GL+P +VT++ LI GL K  K  +A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           ++L                                   FD ++   C  D   Y  +I+G
Sbjct: 65  VEL-----------------------------------FDDMVARGCQPDDYTYTTIING 89

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
             K+G    A  L++++ E     ++VT+++LI+  CK  +V +A  +   +K   + P+
Sbjct: 90  LCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPT 149

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             TYT+ +   C     +   ALL EM +  I P  VT+ V++   CK+ K+  A  +L+
Sbjct: 150 IFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLK 209

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            M  +GV PD +TYN+++  +    ++ +A +L + M     +P   +Y+ILI+G C   
Sbjct: 210 TMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAK 269

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            +  A  L   +     +   V+Y T+I   C  G + +A                    
Sbjct: 270 RIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREA-------------------- 309

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +  F  M +NG  P+     ++L  F + G LG  F L   M  + L P+  + N
Sbjct: 310 QDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYN 364



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 133/306 (43%), Gaps = 46/306 (15%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW-------DLYDD 53
           +L   + + G V  A  V+  M E+ ++  + TYNSL+Y       MW        L+D 
Sbjct: 190 VLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYS----MWTEVVEARKLFDV 245

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +       +V++ SI+I+G C+  R+ +A     E   +   P+ VS N ++   C+LG 
Sbjct: 246 MITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGR 305

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A+ LF  M   G  P+ ++Y IL+ G C  G + +A      M    ++P+ + Y+I
Sbjct: 306 LREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNI 365

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L         +  A ++  +L + G  P++  YT +I G C+     EGL          
Sbjct: 366 LVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCK-----EGL---------- 410

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
                               +DEAL     ME  G  PD  +Y+++IRG  +     +A+
Sbjct: 411 --------------------LDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAV 450

Query: 294 QLYNEM 299
            L  EM
Sbjct: 451 HLIGEM 456


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 262/513 (51%), Gaps = 20/513 (3%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P    +N ++  L  A     AL     M  +G+  D  T++IL   F  L   S ++ V
Sbjct: 68  PPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSV 127

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
             K+L KG DP+ +T+  LI G C  G++ + L   + +++QGF L+ ++Y  L++ +CK
Sbjct: 128 FGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCK 187

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            GRI  AL LL  ++   ++P+ V Y+++I  +CK   V+ A  LY++M +KRISP+ F 
Sbjct: 188 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFT 247

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
             +++ G C    + EA      +I+ N    +  ++I++D + K G + EA  +    +
Sbjct: 248 CNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTM 307

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           +K I   +VT+NSL+ G+C   ++  A+ + D++   G+  +  +YTT +N  C+   + 
Sbjct: 308 KKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVD 367

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             + L +EM  + I P  VTY  +I GL K  K+   ++L+++M+  G  P+ ITYN+I+
Sbjct: 368 EAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSIL 427

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
            + CK   + KA  LL  +    + P   TY +LI GLC +G L++A  +   L     +
Sbjct: 428 DALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYN 487

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEI 610
           L    YT +I+  C +G    A+    +M +                    NG  P+ + 
Sbjct: 488 LDVYTYTVMIQGFCVKGLFDAALALLSKMED--------------------NGCIPNAKT 527

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
            E+++++  +  +     +L   MI  GLL +K
Sbjct: 528 YEIVILSLFEKDENDMAEKLLREMIARGLLDEK 560



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 257/495 (51%), Gaps = 16/495 (3%)

Query: 31  IQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA 90
           I ++NSLL++                + TP  +  N I +  L +      A+   Q+  
Sbjct: 54  ISSFNSLLHH---------------KNPTPPIIQFNKI-LSSLVKAKHHSTALSLHQQME 97

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
                    + N +++ + +LG   ++  +F  +LK G  P+A ++N LI GLC+ G + 
Sbjct: 98  LNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIH 157

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           +AL F + +   G   D ++Y  L  G   + +I+ A ++++++  K   P+ V Y ++I
Sbjct: 158 QALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMII 217

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
              C+   V +   L   M+++    +    + L+   C  G++ EA+GLL++M    + 
Sbjct: 218 DNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENIN 277

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P + T+SIL+   CK+ KV +A  +      K I  +   + +++ G C  + I +A+  
Sbjct: 278 PRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDI 337

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           FDS+     I +V  Y  MI+G  K+  + EAV L+ ++  ++I P++VT+NSLI G  K
Sbjct: 338 FDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGK 397

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            GK++   +L+D +   G  P+ +TY + ++A C+  ++ + +ALL  ++ + I P   T
Sbjct: 398 LGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYT 457

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           YTV+IKGLC+  KL++A ++ ED+ V G   D  TY  +I+ FC       A  LL++M 
Sbjct: 458 YTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKME 517

Query: 511 LHNLEPTSATYNILI 525
            +   P + TY I+I
Sbjct: 518 DNGCIPNAKTYEIVI 532



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 213/442 (48%), Gaps = 3/442 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           +S+ G+   +  V  K+ +     +  T+N+L+  L    H     + +D +       +
Sbjct: 115 FSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLD 174

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +   +I+GLC+  R+  A+  L+   GK   P+ V  N I+   CK      A  L+ 
Sbjct: 175 QVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYS 234

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+   + PD F+ N LI+G CI G ++EA+   + M    + P   T+SIL   F    
Sbjct: 235 QMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEG 294

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A  ++   + K    D+VTY  L+ GYC +  + +   + + M S+G   NV +Y+
Sbjct: 295 KVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYT 354

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +++ +CK   +DEA+ L  EM    + P++VTY+ LI GL K  K+   ++L +EM  +
Sbjct: 355 TMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDR 414

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              PN   + +IL  LC+   + +A     +L       D+  Y ++I G  + G + +A
Sbjct: 415 GQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDA 474

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +++  L+ K  +  + T+  +I GFC  G    A  LL  ++ +G  P+A TY   + +
Sbjct: 475 QKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILS 534

Query: 423 YCEEGNIQRLLALLQEMETKAI 444
             E+        LL+EM  + +
Sbjct: 535 LFEKDENDMAEKLLREMIARGL 556



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 5/328 (1%)

Query: 267 VGLKPDLVT-YSILIRGLCKQDKVHKAIQLYNEMCS-KRISPNSFAHGAILLGLCEKEMI 324
           +GL P  ++ YS L      QD+ +  I  +N +   K  +P       IL  L + +  
Sbjct: 30  IGLFPSSISLYSQLHH---HQDEENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHH 86

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
           + A      + ++  + D   +NI+I+ + +LG    +  ++ ++++K   P+ +TFN+L
Sbjct: 87  STALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTL 146

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G C  G +  A    D +   G     V+Y T +N  C+ G I   L LL+ ++ K +
Sbjct: 147 IKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLV 206

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  V Y ++I  +CK   + +A  L   M    ++PD  T N++I  FC    L++A  
Sbjct: 207 QPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVG 266

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           LL++M L N+ P   T++IL+D  C  G +K A  +L    + +I L  V Y +++  +C
Sbjct: 267 LLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYC 326

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYT 592
              +++KA   F  M  +G   +++ YT
Sbjct: 327 LVKEINKAKDIFDSMASRGVIANVQSYT 354


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 157/559 (28%), Positives = 273/559 (48%), Gaps = 36/559 (6%)

Query: 85  FLQETAGKEF---GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           FLQ ++   F    PS+ +++  +S++ +             ML     P    +N ++ 
Sbjct: 21  FLQNSSHSHFHSQPPSIQNVDDAVSQFNR-------------MLCMRHTPPIIQFNKILD 67

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
                     A+  ++ +   G++PD IT +IL   F  + QI+  + V+ K+L +G  P
Sbjct: 68  SFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPP 127

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D VT   LI G C  G V++ L   + +L+QGF+LN ++Y+ L++ +CK G    A+ LL
Sbjct: 128 DTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLL 187

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            +++    KP++  YS +I  LCK   V +A  L++EM  K IS +   +  ++ G C +
Sbjct: 188 RKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIE 247

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             + EA    + +++     +V  YNI++D   K G + EA  +   +++  + P ++T+
Sbjct: 248 GKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITY 307

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           ++L+ G+    +V  A+ + + + L G+ P   TYT  +N +C+   +   L L +EM  
Sbjct: 308 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQ 367

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           K + P  VTY+ +I GLCK  ++     L+++M   G   D ITY+++I   CK   L +
Sbjct: 368 KNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDR 427

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A  L N+M    + P   T+ IL+DGLC  G LK+A  +   L      L    Y  +I 
Sbjct: 428 AIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIN 487

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQG 621
            HC +G + +A+T   +M +                    NG  P+    E ++IA  + 
Sbjct: 488 GHCKQGLLEEALTMLSKMED--------------------NGCIPNAFTFETIIIALFKK 527

Query: 622 GDLGSVFELAAVMIKSGLL 640
            +     +L   MI  GLL
Sbjct: 528 DENDKAEKLLRQMIARGLL 546



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 269/531 (50%), Gaps = 14/531 (2%)

Query: 24  ELDLKVSIQTYNSLLYNLRHT-------------DIMWDLYDDIKVSETPRNVYTNSIVI 70
              + +SI  ++S L N  H+             D +      + +  TP  +  N I +
Sbjct: 8   RFSVSLSIPNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKI-L 66

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           D   +      A+        K   P +++LN +++ +C +G       +   +LK G  
Sbjct: 67  DSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYP 126

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD  + N LI GLC+ G +++AL F + +   G + + ++Y+ L  G   +    GA K+
Sbjct: 127 PDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL 186

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++K+  + + P++  Y+ +I   C+   V E   L   M  +G   +V+ YS L+   C 
Sbjct: 187 LRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 246

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++ EA+GLL EM    + P++ TY+IL+  LCK+ KV +A  +   M    + P+   
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G      + +A+  F+++ +     DV  Y I+I+G+ K   + EA+ L++++ 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           +K + P IVT++SLI G CK+G++     L+D ++  G     +TY++ ++  C+ G++ 
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 426

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           R +AL  +M+ + I P   T+T+++ GLCK  +L++A ++ +D+   G   +  TYN +I
Sbjct: 427 RAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
              CK   L +A  +L++M  +   P + T+  +I  L    +   A+ LL
Sbjct: 487 NGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLL 537



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 184/351 (52%)

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           T  NV   S +ID LC+   + +A     E   K     VV+ + ++  +C  G  + A 
Sbjct: 195 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAI 254

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
           GL   M+   ++P+ ++YNIL+  LC  G ++EA      M +  V+PD ITYS L  G+
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
            L+ ++  A  V   + + G  PD+ TYT+LI G+C+   V+E L L + M  +     +
Sbjct: 315 FLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + YS L+  +CKSGRI     L+ EM   G   D++TYS LI GLCK   + +AI L+N+
Sbjct: 375 VTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNK 434

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  + I PN F    +L GLC+   + +A+  F  L+      +V  YN+MI+G+ K G 
Sbjct: 435 MKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGL 494

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           + EA+ +  ++ +    P+  TF ++I    K  +   A +LL  +   GL
Sbjct: 495 LEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 196/383 (51%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  + + +I+G+C+    + AI  L++  G+   P+V   + I+   CK      A GLF
Sbjct: 163 NQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLF 222

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G+  D  +Y+ LI+G CI G ++EA+   N+M    + P+  TY+IL       
Sbjct: 223 SEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  V+  +L     PD++TY+ L+ GY  +  V++   +   M   G   +V  Y
Sbjct: 283 GKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++L++  CK+  +DEAL L  EM    + P +VTYS LI GLCK  ++     L +EM  
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRD 402

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +    +   + +++ GLC+   +  A   F+ +       ++  + I++DG  K G + +
Sbjct: 403 RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKD 462

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A ++++ L+ K    ++ T+N +I G CK G + +A  +L  ++ +G  P+A T+ T + 
Sbjct: 463 AQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIII 522

Query: 422 AYCEEGNIQRLLALLQEMETKAI 444
           A  ++    +   LL++M  + +
Sbjct: 523 ALFKKDENDKAEKLLRQMIARGL 545


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 145/466 (31%), Positives = 246/466 (52%), Gaps = 7/466 (1%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P    +N ++  L        A+  +  M   G+  + +T +IL   F  L Q++ ++ V
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           + K+L  G  PD +T   L+ G C  G V++ L   + +++QGF+++ ++Y  LL+ +CK
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G    A+ LL  +E    +P++V Y+ +I GLCK   V++A  LY+EM ++ I P++  
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C    +  A    D +I+ N    V +YNI+I+   K GN+ EA  L   + 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           ++ I P +VT+++L+ G+C  G+V +A+++   +   G+ P+  +Y   +N  C+   + 
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             + LL+EM  K + P  VTY  +I GLCK  ++  A+ L+ +M+  G   D +TY +++
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
            + CK ++L KA  L  +M    ++PT  TY  LIDGLC  G LKNA  L   L      
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 427

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIR 589
           +    YT +I   C EG   +A+    +M + G       FEI IR
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIR 473



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 239/473 (50%), Gaps = 1/473 (0%)

Query: 56  VSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
           V  TP  +  N I +  L +  +   AI   ++   K    + V+LN +++ +C LG   
Sbjct: 4   VRHTPPIIEFNKI-LGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMA 62

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            +  +   +LK G  PD  + N L+ GLC+ G ++++L F + +   G + D ++Y  L 
Sbjct: 63  FSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLL 122

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            G   + +   A K+++ +  + + P++V Y  +I G C+   V E   L   M ++G  
Sbjct: 123 NGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF 182

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            + I Y+ L+   C  G++  A  LL EM    + P +  Y+ILI  LCK+  V +A  L
Sbjct: 183 PDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNL 242

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
              M  + I P    +  ++ G C    +  A+  F +++      +V  YNIMI+G  K
Sbjct: 243 LAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCK 302

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
              + EA+ L R+++ K + P  VT+NSLI G CK+G++  A  L++ +   G     VT
Sbjct: 303 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 362

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           YT+ ++A C+  N+ +  AL  +M+ + I PT  TYT +I GLCK  +L+ A +L + + 
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 422

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           V G   D  TY  +I   CK     +A  + ++M  +   P + T+ I+I  L
Sbjct: 423 VKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSL 475



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 234/496 (47%), Gaps = 19/496 (3%)

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
           RH   P  I ++ +      + Q   A  + +++ +KG   + VT  +LI  +C +G + 
Sbjct: 5   RH--TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMA 62

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
               +   +L  G++ + I  + L+  +C  G + ++L    ++ A G + D V+Y  L+
Sbjct: 63  FSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLL 122

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
            GLCK  +   A++L   +  +   PN   +  I+ GLC+ +++ EA   +  +      
Sbjct: 123 NGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF 182

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            D + Y  +I G+  LG +  A  L  ++I K I+P +  +N LI   CK G V +A+ L
Sbjct: 183 PDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNL 242

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L  +   G++P  VTY+T M+ YC  G +Q    +   M    + P   +Y ++I GLCK
Sbjct: 243 LAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCK 302

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS-A 519
             ++ EA+ LL +M    + PD +TYN++I   CK   +  A  L+N+M  H  +P    
Sbjct: 303 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMH-HRGQPADVV 361

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TY  L+D LC N +L  A  L + ++E  I  T   YT +I   C  G +  A   F  +
Sbjct: 362 TYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHL 421

Query: 580 VEKGFEISIRDYTK--SFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDL 624
           + KG  I +  YT   S  C              M  NG  P+    E+++ +  +  + 
Sbjct: 422 LVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEN 481

Query: 625 GSVFELAAVMIKSGLL 640
               +L   MI  GLL
Sbjct: 482 DKAEKLLHEMIAKGLL 497



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 215/402 (53%), Gaps = 6/402 (1%)

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +L+    P I+ +  ++    ++      + L + M  +G + N +  ++L++  C  G+
Sbjct: 1   MLLVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQ 60

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +  +  +L ++  +G +PD +T + L++GLC + +V K++  ++++ ++    +  ++G 
Sbjct: 61  MAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGT 120

Query: 314 ILLGLCEKEMITEARMYFDSLIM---SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +L GLC+   I E R     L M    +   +VV+YN +IDG  K   + EA  LY ++ 
Sbjct: 121 LLNGLCK---IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMD 177

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            + I P  +T+ +LIYGFC  G++  A  LLD + L  + P    Y   +NA C+EGN++
Sbjct: 178 ARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVK 237

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               LL  M  + I P  VTY+ ++ G C   ++Q A Q+   M  +GV P+  +YN +I
Sbjct: 238 EAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMI 297

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CKCK + +A  LL +M   N+ P + TYN LIDGLC +G + +A  L+  +      
Sbjct: 298 NGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQP 357

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
              V YT+++ A C   ++ KA   F +M E+G + ++  YT
Sbjct: 358 ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYT 399



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 218/461 (47%), Gaps = 71/461 (15%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K+   P  +  N++ + GLC +  ++ ++ F  +   + F    VS   +++  CK+G 
Sbjct: 72  LKLGYQPDTITLNTL-MKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGE 130

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A  L  ++      P+   YN +I GLC    + EA +  ++M   G+ PDAITY+ 
Sbjct: 131 TRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTT 190

Query: 174 LAKGFHLLSQISGAWKVIQKLLIK-----------------------------------G 198
           L  GF LL Q+ GA+ ++ ++++K                                   G
Sbjct: 191 LIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEG 250

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P +VTY+ L+ GYC +G V+   ++   M+  G   NV +Y+++++ +CK  R+DEA+
Sbjct: 251 IKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAM 310

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            LL EM    + PD VTY+ LI GLCK  ++  A+ L NEM   R  P            
Sbjct: 311 NLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM-HHRGQP------------ 357

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
                                  DVV Y  ++D   K  N+ +A  L+ ++ E+ I P++
Sbjct: 358 ----------------------ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTM 395

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            T+ +LI G CK G++ +A+ L   + + G      TYT  ++  C+EG     LA+  +
Sbjct: 396 YTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSK 455

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ME     P  VT+ ++I+ L ++ +  +A +LL +M   G+
Sbjct: 456 MEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 199/397 (50%), Gaps = 3/397 (0%)

Query: 13  HDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDG 72
           HD V  +A+  ++D  VS  T  + L  +  T     L   I+   T  NV   + +IDG
Sbjct: 103 HDKV--VAQGFQMD-HVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDG 159

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           LC+   + +A     E   +   P  ++   ++  +C LG    A  L   M+   ++P 
Sbjct: 160 LCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPG 219

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
            + YNILI+ LC  G+++EA      M + G++P  +TYS L  G+ L+ ++  A ++  
Sbjct: 220 VYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFH 279

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
            ++  G +P++ +Y ++I G C+   V+E + L   ML +    + + Y+ L+  +CKSG
Sbjct: 280 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 339

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           RI  AL L+ EM   G   D+VTY+ L+  LCK   + KA  L+ +M  + I P  + + 
Sbjct: 340 RITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYT 399

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           A++ GLC+   +  A+  F  L++  C  DV  Y +MI G  K G   EA+ +  ++ + 
Sbjct: 400 ALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDN 459

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
              P+ VTF  +I    +  +   A +LL  +   GL
Sbjct: 460 GCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 20/269 (7%)

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
           R +P I+ FN ++    K  +   A  L   +++ G+  + VT    +N +C  G +   
Sbjct: 5   RHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFS 64

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
            ++L ++      P  +T   ++KGLC + ++++++   + +   G   D ++Y T++  
Sbjct: 65  FSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNG 124

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            CK  + R A +LL  +   +  P    YN +IDGLC +  +  A  L   +    I   
Sbjct: 125 LCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPD 184

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE 612
            + YTT+I   C  G +  A +   +M+ K                       P   I  
Sbjct: 185 AITYTTLIYGFCLLGQLMGAFSLLDEMILKNIN--------------------PGVYIYN 224

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           +++ A  + G++     L AVM K G+ P
Sbjct: 225 ILINALCKEGNVKEAKNLLAVMTKEGIKP 253


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 237/477 (49%), Gaps = 38/477 (7%)

Query: 22  MKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSR 78
           MKE  +  +I+T NSLL     L  T+  W LY ++       +VYT +I+I+ L     
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVL----- 231

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
                                         CK G  + AK     M   G+ P+  +YN 
Sbjct: 232 ------------------------------CKEGKLKKAKDFVGHMETSGVKPNIVTYNT 261

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           ++HG C +G +E A      M R  +EPD+ TY  L  G     ++  A K+ ++++ KG
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG 321

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P  V Y  LI G+C  GN++     ++ ML +G    +  Y+ L+ ++    R DEA 
Sbjct: 322 LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAE 381

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            ++ E++  G+ PD +TY+ILI G C+     KA  L++EM +  I P    + ++L  L
Sbjct: 382 CMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVL 441

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
            +K  + EA   F  +     + DV+++N +IDG+    N+  A +L + +   ++ P  
Sbjct: 442 SKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDE 501

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VTFN+++ G C+ GKV +AR L D +K  G++P  +++ T ++ Y   G+I+    +  E
Sbjct: 502 VTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNE 561

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           M      PT +TY  +++GLCK  +   A +LL++M   G+TPD  TY T+I    K
Sbjct: 562 MLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/503 (27%), Positives = 241/503 (47%), Gaps = 39/503 (7%)

Query: 64  YTNSIVIDGL----CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           + +SIV D L    C  +R  +A         K   P++ + N+++S + KL   E A  
Sbjct: 148 FKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV 207

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L+  M +  +    +++NI+I+ LC  G +++A +F   M   GV+P+            
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPN------------ 255

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
                                  IVTY  ++ GYC  G VE    +   M  Q  + +  
Sbjct: 256 -----------------------IVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSF 292

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y  L+S MCK GR++EA  +  EM   GL+P  V Y+ LI G C +  +  A    +EM
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM 352

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K ISP    + +++  L  ++   EA      +       D + YNI+I+GY +  N 
Sbjct: 353 LKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANA 412

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A  L+ +++   I P+  T+ SL++   K  ++ +A  L   I   G+ P  + +   
Sbjct: 413 KKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNAL 472

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ +C   N++    LL++M+   + P  VT+  +++G C++ K++EA +L ++M   G+
Sbjct: 473 IDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGI 532

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD I++NT+I  + +  D++ AF++ N+M      PT  TYN L+ GLC N +   A+ 
Sbjct: 533 KPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEE 592

Query: 540 LLVSLQEHNISLTKVAYTTIIKA 562
           LL  +    ++     Y T+I+ 
Sbjct: 593 LLKEMVSKGMTPDDTTYFTLIEG 615



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 243/502 (48%), Gaps = 22/502 (4%)

Query: 142 GLCIAGSMEEALEF-TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
           G     S+ E  EF      R G +  +I +  L K    +++   A++    +  KG  
Sbjct: 125 GGGTTNSIREIFEFLAASRDRLGFK-SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVL 183

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P I T   L+  + ++   E    L   M     K +V  ++++++ +CK G++ +A   
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           +  ME  G+KP++VTY+ ++ G C   +V  A  +   M  ++I P+SF +G+++ G+C+
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCK 303

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
           +  + EA   F+ ++        V+YN +IDG+   GN+  A     ++++K ISP++ T
Sbjct: 304 QGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMST 363

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +NSLI+      +  +A  ++  I+  G+ P A+TY   +N YC   N ++   L  EM 
Sbjct: 364 YNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEML 423

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
              I PT  TYT ++  L K+ +++EA  L + +   GV PD I +N +I   C   +++
Sbjct: 424 ASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVK 483

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
            AF+LL  M    + P   T+N ++ G C  G ++ A  L   ++   I    +++ T+I
Sbjct: 484 GAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
             +   GD+  A     +M++ GF  ++  Y                Q +C+      +Q
Sbjct: 544 SGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALV------------QGLCK------NQ 585

Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
            GDL    EL   M+  G+ PD
Sbjct: 586 EGDLAE--ELLKEMVSKGMTPD 605



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 160/344 (46%), Gaps = 15/344 (4%)

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C+     EA   F ++     +  +   N ++  ++KL     A  LY ++   RI  S+
Sbjct: 162 CDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSV 221

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            TFN +I   CK GK+  A+  +  ++  G++P+ VTY T ++ YC  G ++   A+L  
Sbjct: 222 YTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTT 281

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M+ + I P   TY  +I G+CKQ +L+EA ++ E+M   G+ P  + YNT+I  FC   +
Sbjct: 282 MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L  A    ++M    + PT +TYN LI  L +      A+C++  +QE  IS   + Y  
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNG 603
           +I  +C   +  KA     +M+  G + + + YT                  F  + S G
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             PD  +   ++       ++   FEL   M +  + PD+   N
Sbjct: 462 VLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFN 505



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 180/394 (45%), Gaps = 44/394 (11%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPR 61
           V  + G +  A   +  M+   +K +I TYN++++   +    +    +   +K  +   
Sbjct: 230 VLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA---- 117
           + +T   +I G+C+Q RL++A    +E   K   PS V  N ++  +C  G  ++A    
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK 349

Query: 118 -----KGLFCLMLKY--------------------------GLHPDAFSYNILIHGLCIA 146
                KG+   M  Y                          G+ PDA +YNILI+G C  
Sbjct: 350 DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRC 409

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ---ISGAWKVIQKLLIKGSDPDI 203
            + ++A    ++M   G++P   TY+ L    H+LS+   +  A  + +K+  +G  PD+
Sbjct: 410 ANAKKAFLLHDEMLASGIKPTKKTYTSL---LHVLSKKNRMKEADDLFKKITSEGVLPDV 466

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           + +  LI G+C   NV+   +L + M       + + ++ ++   C+ G+++EA  L  E
Sbjct: 467 IMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M+  G+KPD ++++ LI G  ++  +  A ++ NEM     +P    + A++ GLC+ + 
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
              A      ++      D   Y  +I+G  K+ 
Sbjct: 587 GDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 109/209 (52%), Gaps = 4/209 (1%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L+D++  S       T + ++  L +++R+++A    ++   +   P V+  NA++  +C
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHC 477

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
                + A  L   M +  + PD  ++N ++ G C  G +EEA E  ++M R G++PD I
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC--QIGNVEEGLKLRE 227
           +++ L  G+     I  A++V  ++L  G +P ++TY  L+ G C  Q G++ E L L+E
Sbjct: 538 SFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEEL-LKE 596

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
            M+S+G   +   Y  L+  + K    DE
Sbjct: 597 -MVSKGMTPDDTTYFTLIEGIAKVNIPDE 624


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 162/583 (27%), Positives = 279/583 (47%), Gaps = 19/583 (3%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           R+ D +  +  +    FG ++ S N ++ +  K      A+ ++  +   G+ P   ++N
Sbjct: 142 RVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFN 201

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
            +I+ LC  G ++EA+   N + +  + PDA TY+ L  G     ++  A++V  +++  
Sbjct: 202 TMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKD 261

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G +P+ VTY+ LI G C  G + E + + E M  +G +  V  Y+V +SS+C  GR+D+A
Sbjct: 262 GCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDA 321

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           + L+  M   G  P + TY+ +I GL +  K+  AI +Y++M  + + PN+  + A++  
Sbjct: 322 INLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINE 381

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC +     A   FD +     + +   YN +I G   + +I +A+ ++ ++++   SP+
Sbjct: 382 LCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPT 441

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           +VT+N+LI    K G + +A R L  +K    EP   TY   ++ +C+ G +    +   
Sbjct: 442 VVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFY 501

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM    I P   TYT +I G CK+ K+  A+ L E M   G +    TYN II    K  
Sbjct: 502 EMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGN 561

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
              +A +   +M    L+P + TY  LI+GLC N     A  +   +++ N       YT
Sbjct: 562 RFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYT 621

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSN 602
           ++I   C EG V  A     ++ E G E +I  Y+   S  C              M   
Sbjct: 622 SLIYGLCQEGKVDAAE----RLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEK 677

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           G  P  EI   +L+A  +   +    E+  +M   G  P  F+
Sbjct: 678 GLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFI 720



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 162/587 (27%), Positives = 274/587 (46%), Gaps = 7/587 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G V +AV V  K+ + DL     TY SL+      R  D  ++++D +       N  
Sbjct: 209 KKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSV 268

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S +I+GLC + R+ +A+  L+E   K   P+V +    +S  C +G  + A  L   M
Sbjct: 269 TYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSM 328

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K G  P   +Y  +I GL  AG ME A+   + M + G+ P+ +TY+ L        + 
Sbjct: 329 GKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRF 388

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A K+   +   G+  +  TY  +I G   + ++E+ + +   ML  G    V+ Y+ L
Sbjct: 389 GIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTL 448

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +    K G ++ A   LY M+    +PD  TY  LI G CK  K+  A   + EM    I
Sbjct: 449 IVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGI 508

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SPN + + A++ G C++  I  A   F+ +  + C   +  YN +I G  K     EA +
Sbjct: 509 SPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEK 568

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
              ++ E+ + P+ +T+ SLI G CKN     A ++   ++     P+A TYT+ +   C
Sbjct: 569 FCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLC 628

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +EG +       + +      PT  TY+ ++ GLC++ +  EA QL+E+M   G++P   
Sbjct: 629 QEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSME 684

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y +++ + CK   +  A ++ N M +   +P    Y +LI  LC     + A  +  SL
Sbjct: 685 IYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSL 744

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
            +   +   + +T ++     EGD    M F   M  +    S+  Y
Sbjct: 745 LKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTY 791



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 277/559 (49%), Gaps = 7/559 (1%)

Query: 30  SIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           ++ ++N+LL  L   D++    ++Y  I  S    ++ T + +I+ LC++ ++Q+A+L  
Sbjct: 161 TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVF 220

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            +    +  P   +  +++  +C+    + A  +F  M+K G +P++ +Y+ LI+GLC  
Sbjct: 221 NKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNE 280

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G + EA++   +M   G+EP   TY++       + ++  A  +++ +  KG  P + TY
Sbjct: 281 GRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTY 340

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T +I G  + G +E  + +   ML +G   N + Y+ L++ +C  GR   AL +   ME 
Sbjct: 341 TAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEG 400

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G   +  TY+ +I+GL   D + KA+ ++N+M     SP    +  +++   ++  +  
Sbjct: 401 HGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNN 460

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A  +   +  SNC  D   Y  +I G+ K G +  A   + ++++  ISP+  T+ ++I 
Sbjct: 461 ATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMID 520

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G+CK GK+  A  L + ++ +G   S  TY   ++   +            +M  + + P
Sbjct: 521 GYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQP 580

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             +TYT +I GLCK      A ++  +M      P+  TY ++I   C+   +  A +L 
Sbjct: 581 NTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLT 640

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
                +  EPT  TY+ L+ GLC  G    A  L+ +++E  +S +   Y +++ AHC  
Sbjct: 641 E----NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKS 696

Query: 567 GDVHKAMTFFCQMVEKGFE 585
             V  A+  F  M  KGF+
Sbjct: 697 LKVDCALEIFNLMAVKGFQ 715



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 158/590 (26%), Positives = 256/590 (43%), Gaps = 51/590 (8%)

Query: 3   AFVYS-------RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLY 51
           AF Y+       R   +  A  V  +M +     +  TY++L+  L    R  + M D+ 
Sbjct: 232 AFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAM-DML 290

Query: 52  DDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
           +++        VYT ++ I  LC   R+ DAI  ++    K   PSV +  AI+S   + 
Sbjct: 291 EEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRA 350

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G  E+A G++  MLK GL P+  +YN LI+ LC  G    AL+  + M  HG   +A TY
Sbjct: 351 GKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTY 410

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + + KG   +  I  A  V  K+L  G  P +VTY  LI    + G +    +   +M  
Sbjct: 411 NQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKE 470

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
              + +   Y  L+S  CK G++D A    YEM   G+ P+  TY+ +I G CK+ K+  
Sbjct: 471 SNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDV 530

Query: 292 AIQLYNEM----CSKRIS-------------------------------PNSFAHGAILL 316
           A+ L+  M    CS  I                                PN+  + +++ 
Sbjct: 531 ALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLIN 590

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           GLC+      A   F  +   NC+ +   Y  +I G  + G +  A     +L E    P
Sbjct: 591 GLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEP 646

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           +I T+++L+ G C+ G+  +A +L++ +K  GL PS   Y + + A+C+   +   L + 
Sbjct: 647 TIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIF 706

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
             M  K   P    Y V+I  LC   + +EA+ + + +       D I +  ++    + 
Sbjct: 707 NLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQE 766

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
            D     + L  M   N  P+  TY IL   L   G     D +   L+E
Sbjct: 767 GDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLRE 816


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 161/555 (29%), Positives = 280/555 (50%), Gaps = 81/555 (14%)

Query: 30  SIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           S+ ++N LL  L   +H   ++ LY+ +++S    +  T +I+++ LC  +RL++     
Sbjct: 68  SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLRE----- 122

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
                                    GFA  A      +L+ G  P+  +YN LI GLC+ 
Sbjct: 123 -------------------------GFAAFAG-----ILRRGYSPNIVTYNTLIKGLCME 152

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS------D 200
             + EA      M + G  PD +TY  L KG      I+ A K+ Q++L   S       
Sbjct: 153 HRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCK 212

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P+++TY +++ G C++G  +E  +L E M +QG   ++I+Y+ L+   C +G+ +E+  L
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRL 272

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L EM   GL+PD+VT+++LI  LCK+ KV +A +L   M    I P+   + +++ G C 
Sbjct: 273 LDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCM 332

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              +  AR  F S+    C  DV+ YN++I+GY K   + EA++LY +++     P+++T
Sbjct: 333 VGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 392

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE-------------- 426
           ++SL+ G    GKV DA++L   +K HG+  ++ TY  F++  C+               
Sbjct: 393 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 452

Query: 427 ---------------------GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
                                G ++    L +++  +   P  VTYT++I G C++ ++ 
Sbjct: 453 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVD 512

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           +A  L++ M   G TPD ITYNT++R F +   L +  QLL++M   ++ P + T +I++
Sbjct: 513 KANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 572

Query: 526 DGLCVNGDLKNADCL 540
           D L  + D K  +CL
Sbjct: 573 DML--SKDEKYQECL 585



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 146/452 (32%), Positives = 244/452 (53%), Gaps = 11/452 (2%)

Query: 30  SIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILF 85
           +I TYN+L+  L    R ++         K+  TP +V T   +I GLC    +  A+  
Sbjct: 138 NIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP-DVVTYGTLIKGLCGTGNINIALKL 196

Query: 86  LQETAGK------EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
            QE             P+V++ N I+   CK+G  + AK LF  M   G+ P   SYN L
Sbjct: 197 HQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSL 256

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           IHG C AG  EE+    ++M   G++PD +T+++L        ++  A K++  ++  G 
Sbjct: 257 IHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 316

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            PD+VTY  LI G+C +G++    +L   M S+G + +VI+Y+VL++   K+ +++EA+ 
Sbjct: 317 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMK 376

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           L  EM  VG +P+++TY  L++G+    KV  A +L++ M +  I+ NS+ +G  L GLC
Sbjct: 377 LYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLC 436

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           + + + EA   F  L  SN   ++   N +IDG  K G +  A +L+ +L  +   P++V
Sbjct: 437 KNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVV 496

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T+  +I+GFC+ G+V  A  L+  ++ +G  P  +TY T M  + E   ++ ++ LL  M
Sbjct: 497 TYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRM 556

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
             K + P  +T ++V+  L K  K QE + LL
Sbjct: 557 AQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 250/512 (48%), Gaps = 8/512 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+ S N ++S   K+        L+  M   GL  D  + NIL++ LC    + E    
Sbjct: 67  PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              + R G  P+ +TY+ L KG  +  +IS A ++  ++   G  PD+VTY  LI G C 
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 216 IGNVEEGLKLREVMLSQ------GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
            GN+   LKL + ML+         K NVI Y++++  +CK GR DEA  L  EM+  G+
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P +++Y+ LI G C   K  ++ +L +EM  + + P+      ++  LC++  + EA+ 
Sbjct: 247 IPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 306

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               +I S  + D+V YN +I+G+  +G++  A +L+  +  K   P ++++N LI G+ 
Sbjct: 307 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYS 366

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K  KV +A +L + + L G  P+ +TY + +      G +     L   M+   I     
Sbjct: 367 KTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSY 426

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY + + GLCK   L EA++L  ++       +    N +I   CK   L  A++L  ++
Sbjct: 427 TYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKL 486

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
                EP   TY I+I G C  G +  A+ L+  ++ +  +   + Y T+++       +
Sbjct: 487 SNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKL 546

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
            + +    +M +K  ++S    T S    MLS
Sbjct: 547 EEVVQLLHRMAQK--DVSPDAITCSIVVDMLS 576



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 229/451 (50%), Gaps = 6/451 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+ T + +I GLC + R+ +A             P VV+   ++   C  G   +A  L 
Sbjct: 138 NIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLH 197

Query: 122 CLML----KYGLH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
             ML    +Y ++  P+  +YNI++ GLC  G  +EA +   +M   G+ P  I+Y+ L 
Sbjct: 198 QEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLI 257

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            GF    +   + +++ ++L +G  PD+VT+ VLI   C+ G V E  KL  VM+  G  
Sbjct: 258 HGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIV 317

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +++ Y+ L+   C  G ++ A  L   M + G +PD+++Y++LI G  K  KV +A++L
Sbjct: 318 PDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKL 377

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           YNEM      PN   + ++L G+     + +A+  F  +      ++   Y I +DG  K
Sbjct: 378 YNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCK 437

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
              + EA++L+ +L        I   N LI G CK GK+  A  L + +   G EP+ VT
Sbjct: 438 NDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVT 497

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           YT  ++ +C EG + +   L+Q+ME     P  +TY  +++G  +  KL+E VQLL  M 
Sbjct: 498 YTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMA 557

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              V+PD IT + ++    K +  ++   LL
Sbjct: 558 QKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 160/567 (28%), Positives = 256/567 (45%), Gaps = 32/567 (5%)

Query: 84  LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL--FCLMLKYGLHPDAFSYNILIH 141
           LF   +A     P +    A   R+CK G       L  F LM++    P   S+N L+ 
Sbjct: 22  LFTHSSAIPSPNPQI----AFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLS 77

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
           GL       +     N M   G+  D  T +IL      ++++   +     +L +G  P
Sbjct: 78  GLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSP 137

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           +IVTY  LI G C    + E  +L   M   G   +V+ Y  L+  +C +G I+ AL L 
Sbjct: 138 NIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLH 197

Query: 262 YEM------EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
            EM        +  KP+++TY+I++ GLCK  +  +A QL+ EM ++ + P+  ++ +++
Sbjct: 198 QEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLI 257

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            G C      E++   D ++      D+V +N++ID   K G + EA +L   +IE  I 
Sbjct: 258 HGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIV 317

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P +VT+NSLI GFC  G +  AR L  ++   G EP  ++Y   +N Y +   ++  + L
Sbjct: 318 PDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKL 377

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
             EM      P  +TY  ++KG+    K+ +A +L   M   G+  +  TY   +   CK
Sbjct: 378 YNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCK 437

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              L +A +L  ++   N +      N LIDGLC  G L+ A  L   L         V 
Sbjct: 438 NDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVT 497

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
           YT +I   C EG V KA      +++K                M +NG  PD      ++
Sbjct: 498 YTIMIHGFCREGQVDKANV----LIQK----------------MEANGCTPDIITYNTLM 537

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPD 642
             F++   L  V +L   M +  + PD
Sbjct: 538 RGFYESNKLEEVVQLLHRMAQKDVSPD 564



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 187/394 (47%), Gaps = 32/394 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + G   +A  +  +MK   +  SI +YNSL++                            
Sbjct: 227 KVGREDEAKQLFEEMKTQGMIPSIISYNSLIH---------------------------- 258

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
               G C   + +++   L E   +   P +V+ N ++   CK G    AK L  +M++ 
Sbjct: 259 ----GFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 314

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+ PD  +YN LI G C+ G +  A E    M   G EPD I+Y++L  G+    ++  A
Sbjct: 315 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 374

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            K+  ++L+ G  P+++TY  L+ G    G V++  KL  VM + G   N   Y + L  
Sbjct: 375 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG 434

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK+  + EA+ L  E+++   K ++   + LI GLCK  K+  A +L+ ++ ++   PN
Sbjct: 435 LCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPN 494

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  ++ G C +  + +A +    +  + C  D++ YN ++ G+ +   + E VQL  
Sbjct: 495 VVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH 554

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           ++ +K +SP  +T + ++    K+ K  +   LL
Sbjct: 555 RMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 3/208 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           YS+T  V +A+ +  +M  +  + ++ TY+SLL  +      D    L+  +K      N
Sbjct: 365 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 424

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            YT  I +DGLC+   L +A+    E     F   + +LN ++   CK G  E A  LF 
Sbjct: 425 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 484

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   G  P+  +Y I+IHG C  G +++A      M  +G  PD ITY+ L +GF+  +
Sbjct: 485 KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESN 544

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           ++    +++ ++  K   PD +T ++++
Sbjct: 545 KLEEVVQLLHRMAQKDVSPDAITCSIVV 572


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 243/503 (48%), Gaps = 2/503 (0%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           S N   S+       + A   F  ML     P  F +  L+  +         L  +  M
Sbjct: 23  SQNNFQSKSLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKM 82

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              G+ PD  T +I+   F  L+++  A  V+ K+L  G  PD  T+T L+ G C +G +
Sbjct: 83  DSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKI 142

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            E L + + M+ +GF+ NV+ Y  L++ +CK  ++ EAL L  EM A G+ PD+ TY+ L
Sbjct: 143 GEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSL 202

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I  LC   +      L NEM   +I PN  +   ++  LC++  +TEA    D +I    
Sbjct: 203 IHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGV 262

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             DVV Y  ++DG+     + EAV+++  ++      ++V++N+LI G+CK  ++  A  
Sbjct: 263 EPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMY 322

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L + +    L P+ +TY+T ++  C  G +Q  +AL  EM      P  VTY++++  LC
Sbjct: 323 LFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLC 382

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K  +L EA+ LL+ +    + PD   YN  I   C+  DL  A  L + +    L+P   
Sbjct: 383 KNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVW 442

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           T+NI+I GLC  G L  A  L   + E+        Y TI +         +A+    +M
Sbjct: 443 THNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEM 502

Query: 580 VEKGFEISIRDYTKSFFCMMLSN 602
           + +GF   +   T +    MLS+
Sbjct: 503 LARGFSADVS--TTALLVKMLSD 523



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 211/418 (50%), Gaps = 1/418 (0%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K+   P +  T + ++ GLC   ++ +A+    +  G+ F P+VV+   +M+  CK   
Sbjct: 118 LKLGHQP-DTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQ 176

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A  LF  M+  G+ PD F+YN LIH LC     +      N+M +  + P+ ++ +I
Sbjct: 177 LTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNI 236

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +        +++ A  V+  ++  G +PD+VTY  L+ G+C    ++E +K+ ++M+  G
Sbjct: 237 VVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNG 296

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              NV++Y+ L++  CK  RID+A+ L  EM    L P+ +TYS LI GLC   ++  AI
Sbjct: 297 CVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAI 356

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            L+NEM +    PN   +  +L  LC+   + EA     ++  SN   DV +YNI IDG 
Sbjct: 357 ALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGM 416

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            + G++  A  L+  L  + + P + T N +I G CK G + +A +L   +  +G   + 
Sbjct: 417 CRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNG 476

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
            TY T      +     R + LL+EM  +       T  +++K L      Q   Q+L
Sbjct: 477 CTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQIL 534



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 227/481 (47%), Gaps = 3/481 (0%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DA+    +M  +     I  +  LL +   ++H   +  L   +     P +VYT +IVI
Sbjct: 39  DALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVI 98

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +  C  +R+  A+  L +       P   +   ++   C +G    A  +F  M+  G  
Sbjct: 99  NSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQ 158

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  +Y  L++GLC    + EAL   ++M   G+ PD  TY+ L      L +      +
Sbjct: 159 PNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTL 218

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           + +++     P++V+  +++   C+ G V E   + ++M+  G + +V+ Y+ L+   C 
Sbjct: 219 LNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCL 278

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
              +DEA+ +   M   G   ++V+Y+ LI G CK  ++ KA+ L+ EMC + + PN+  
Sbjct: 279 RSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMT 338

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ GLC    + +A   F+ ++    I ++V Y+I++D   K   + EA+ L + + 
Sbjct: 339 YSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIE 398

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
              + P +  +N  I G C+ G +  AR L   +   GL+P   T+   +   C+ G + 
Sbjct: 399 GSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLD 458

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L +EM+         TY  + +GL +  K   A+QLLE+M   G + D  T   ++
Sbjct: 459 EASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLV 518

Query: 491 R 491
           +
Sbjct: 519 K 519



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 202/395 (51%), Gaps = 3/395 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G + +A+ V  KM     + ++ TY +L+  L   R      +L+ ++       +++T 
Sbjct: 140 GKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTY 199

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I  LC     +     L E    +  P+VVSLN ++   CK G    A  +  +M++
Sbjct: 200 NSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQ 259

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G+ PD  +Y  L+ G C+   M+EA++  + M R+G   + ++Y+ L  G+  + +I  
Sbjct: 260 GGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDK 319

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  + +++  +   P+ +TY+ LI G C +G +++ + L   M++ G   N++ YS+LL 
Sbjct: 320 AMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLD 379

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CK+ R+ EA+ LL  +E   L PD+  Y+I I G+C+   +  A  L++ +  + + P
Sbjct: 380 YLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQP 439

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           + + H  ++ GLC++ ++ EA   F  +  + C+++   YN +  G ++      A+QL 
Sbjct: 440 DVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLL 499

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
            +++ +  S  + T   L+     +G     +++L
Sbjct: 500 EEMLARGFSADVSTTALLVKMLSDDGLDQSVKQIL 534



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 192/410 (46%), Gaps = 20/410 (4%)

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +  ++ LL+S+ K       L L  +M++ G+ PD+ T +I+I   C  ++V  A+ +  
Sbjct: 56  IFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLA 115

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           ++      P++     ++ GLC    I EA   FD ++      +VV Y  +++G  K  
Sbjct: 116 KILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDR 175

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EA+ L+ ++I K ISP I T+NSLI+  C   +      LL+ +    + P+ V+  
Sbjct: 176 QLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLN 235

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++A C+EG +     ++  M    + P  VTY  ++ G C + ++ EAV++ + M   
Sbjct: 236 IVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRN 295

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G   + ++YNT+I  +CK + + KA  L  +M    L P + TY+ LI GLC  G L++A
Sbjct: 296 GCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDA 355

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             L   +         V Y+ ++   C    + +AM        K  E S  D       
Sbjct: 356 IALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALL-----KAIEGSNLD------- 403

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                   PD ++  + +    + GDL +  +L + +   GL PD +  N
Sbjct: 404 --------PDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHN 445



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 72/184 (39%), Gaps = 20/184 (10%)

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           L +A+     M  +   P    +  ++ S  K K       L  +M    + P   T  I
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +I+  C    +  A  +L  + +         +TT+++  C  G + +A+  F +MV +G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 584 FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           F+ ++  Y        L NG   D+++ E +               L + MI  G+ PD 
Sbjct: 157 FQPNVVTYGT------LMNGLCKDRQLTEAL--------------NLFSEMIAKGISPDI 196

Query: 644 FLIN 647
           F  N
Sbjct: 197 FTYN 200


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/640 (27%), Positives = 288/640 (45%), Gaps = 105/640 (16%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N++T +++I GLC++ R+  A   L+E   +   PSV + NA++  YCK G  + A G+ 
Sbjct: 194 NLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIK 253

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            LM + G +PD ++YNILI+GLC     +EA E  ND    G  P  IT++ +  G+   
Sbjct: 254 ALMERNGCNPDDWTYNILIYGLC-GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKA 312

Query: 182 SQISGAWKV-----------------------------------IQKLLIKGSDPDIVTY 206
            +I  A +V                                   + ++   G  P++V Y
Sbjct: 313 ERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIY 372

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T +I GYC++G V   L++  +M  +G + N   YS L+  + +  ++ +A+ L+ +M+ 
Sbjct: 373 TSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQE 432

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G+ P ++TY+ LI+G CK+ +   A +L+  M    ++P+  A+  +   LC+     E
Sbjct: 433 DGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEE 492

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A   +  L+    +   V Y  ++DG+ K GN   A  L  +++ +       T++ L+ 
Sbjct: 493 A---YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQ 549

Query: 387 GFCKNGKVADARRLLDTIKLHGL-----------------------------------EP 411
             CK  K+ +A  +LD + L G+                                   +P
Sbjct: 550 ALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKP 609

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           SA TYT F+++YC+ G I+    L+ EME   + P  VTY V I G      +  A   L
Sbjct: 610 SATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTL 669

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCK----------------DLRKAFQLLNQMWLHNLE 515
           + M      P+  TY  +++ F K                  +L   +QLL +M  H L 
Sbjct: 670 KRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLN 729

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           PT+ TY+ +I G C    L+ A  L   ++  +IS  +  YT +IK  C      KA++F
Sbjct: 730 PTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSF 789

Query: 576 FCQMVEKGFEISIRDY---------------TKSFFCMML 600
              M+E GF+  +  Y                KS FC +L
Sbjct: 790 VTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLL 829



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 250/528 (47%), Gaps = 24/528 (4%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L  +M   G   + +SY ILI GLC    + EAL     M + G   +  TY++L KG  
Sbjct: 147 LLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLC 206

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +I GA +V++++ ++G  P + TY  +I GYC+ G +++ L ++ +M   G   +  
Sbjct: 207 KEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDW 266

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y++L+  +C   + DEA  LL +    G  P ++T++ +I G CK +++  A+++   M
Sbjct: 267 TYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSM 325

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            S     +  A+G ++  L +K    EA+     +  +    +VV+Y  +IDGY K+G +
Sbjct: 326 LSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKV 385

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           G A++++R +  +   P+  T++SLIYG  ++ K+  A  L+  ++  G+ P  +TYTT 
Sbjct: 386 GAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTL 445

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +   C++        L + ME   + P    Y V+   LCK  + +EA   L      GV
Sbjct: 446 IQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRK---GV 502

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
              ++TY +++  F K  +   A  L+ +M     +  S TY++L+  LC    L  A  
Sbjct: 503 VLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALS 562

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           +L  +    +    VAYT II     EG                      D+ KS F  M
Sbjct: 563 ILDQMTLSGVKCNIVAYTIIISEMIKEGK--------------------HDHAKSMFNEM 602

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +S+G  P      V + ++ + G +     L   M + G+ PD    N
Sbjct: 603 ISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYN 650



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 169/651 (25%), Positives = 280/651 (43%), Gaps = 87/651 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL--RHTDIMWDLYDDIKVSETPRNV 63
           Y ++G + DA+ + A M+         TYN L+Y L     D   +L +D  V      V
Sbjct: 240 YCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTV 299

Query: 64  YTNSIVIDGLCQQSRLQDAI------------LFLQ-------------------ETAGK 92
            T + +I+G C+  R+ DA+            L LQ                   ET  +
Sbjct: 300 ITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSE 359

Query: 93  EFG----PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
            F     P+VV   +I+  YCK+G    A  +F LM   G  P+A++Y+ LI+GL     
Sbjct: 360 MFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQK 419

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD------ 202
           + +A+     M   G+ P  ITY+ L +G     +   A+++ + +   G  PD      
Sbjct: 420 LHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNV 479

Query: 203 --------------------------IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
                                      VTYT L+ G+ + GN +    L E M+++G K 
Sbjct: 480 LTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKA 539

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +   YSVLL ++CK  +++EAL +L +M   G+K ++V Y+I+I  + K+ K   A  ++
Sbjct: 540 DSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMF 599

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           NEM S    P++  +   +   C+   I EA      +       DVV YN+ I+G   +
Sbjct: 600 NEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHM 659

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK----NGKVADARRLLDTIKL------ 406
           G +  A    +++I+    P+  T+  L+  F K    +    D   + + I+L      
Sbjct: 660 GYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQL 719

Query: 407 ------HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
                 HGL P+AVTY++ +  +C+   ++    L   M  K I P    YT++IK  C 
Sbjct: 720 LERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCD 779

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL-NQMWLHNLEPTSA 519
                +AV  + DM   G  P   +Y+ +I   C   D  KA  L  + + + +      
Sbjct: 780 IKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEV 839

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII-KAHCAEGDV 569
            + IL DGL   G +     LL +++  +  +    Y+ +    H A G V
Sbjct: 840 AWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMVTDNIHEASGSV 890



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 151/619 (24%), Positives = 276/619 (44%), Gaps = 84/619 (13%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           RN Y+ +I+I GLC+   +++A++ L                                  
Sbjct: 158 RNEYSYTILIQGLCETRCVREALVLL---------------------------------- 183

Query: 121 FCLMLKYGLHPDAFSYNILIHGL-----------------------------------CI 145
             +M++ G   +  +Y +LI GL                                   C 
Sbjct: 184 -VMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCK 242

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
           +G M++AL     M R+G  PD  TY+IL  G     +   A +++   +++G  P ++T
Sbjct: 243 SGRMKDALGIKALMERNGCNPDDWTYNILIYGL-CGEKPDEAEELLNDAIVRGFTPTVIT 301

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           +T +I GYC+   +++ L+++  MLS   KL++ AY VL++ + K  R  EA   + EM 
Sbjct: 302 FTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMF 361

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
           A GL P++V Y+ +I G CK  KV  A++++  M  +   PN++ + +++ GL + + + 
Sbjct: 362 ANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLH 421

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +A      +        V+ Y  +I G  K      A +L+  + +  ++P    +N L 
Sbjct: 422 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 481

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
           +  CK+G+  +A   L      G+  + VTYT+ ++ + + GN      L+++M  +   
Sbjct: 482 HALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCK 538

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
               TY+V+++ LCKQ KL EA+ +L+ M + GV  + + Y  II    K      A  +
Sbjct: 539 ADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSM 598

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
            N+M     +P++ TY + I   C  G ++ A+ L+  ++   ++   V Y   I     
Sbjct: 599 FNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGH 658

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYT---KSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
            G + +A +   +M++   E +   Y    K F  M L +    D               
Sbjct: 659 MGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTS-------GMWNWI 711

Query: 623 DLGSVFELAAVMIKSGLLP 641
           +L +V++L   M+K GL P
Sbjct: 712 ELDTVWQLLERMVKHGLNP 730


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 138/438 (31%), Positives = 240/438 (54%), Gaps = 6/438 (1%)

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
           A S+   LEF      HG+ PD  T++IL   +  +++++ A+ ++ K+L  G +PD +T
Sbjct: 87  AISLSRRLEF------HGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTIT 140

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           +  LI G C  G V+E L   + +L+ GF L+  +Y  L++ +CK G    AL +L +++
Sbjct: 141 FNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKID 200

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
              +K ++V Y+ +I  LCK   V  A +LY++M +K+ISP+     A++ G C    + 
Sbjct: 201 GKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLE 260

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA   F  +++ N   D   +NI++D   K GN+  A  +   ++++ + P++VT++SL+
Sbjct: 261 EAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLM 320

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G+C   +V  A+ +L+TI   G  P+A +Y T +N +C+   +   L+L  +M+ K I 
Sbjct: 321 DGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIA 380

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  VTY  +I GLCK  ++  A +L+++M+  G   +  TYN +I + CK   + +A  L
Sbjct: 381 PDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIAL 440

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           + ++    ++P   T+NILI GLC  G LKNA  +   L     S+    Y  ++   C 
Sbjct: 441 VKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCK 500

Query: 566 EGDVHKAMTFFCQMVEKG 583
           EG   +A     +M + G
Sbjct: 501 EGLFDEAEALLSKMDDNG 518



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 233/446 (52%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P + + N +++ YC +     A  +   +LK G  PD  ++N LI GLC+ G ++EAL F
Sbjct: 101 PDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHF 160

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + +   G   D  +Y  L  G   + +   A ++++K+  K    ++V Y  +I   C+
Sbjct: 161 HDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCK 220

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              V +  +L   M+++    +V+ +S L+   C  G+++EA GL  EM    + PD  T
Sbjct: 221 HKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYT 280

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++IL+  LCK+  +  A  +   M  + + PN   + +++ G C    + +A+   +++ 
Sbjct: 281 FNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTIS 340

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 +   Y  MI+G+ K+  + EA+ L+  +  K I+P  VT+NSLI G CK+G+++
Sbjct: 341 QMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRIS 400

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L+D +  +G   +  TY   ++A C+  ++ + +AL+++++ + I P   T+ ++I
Sbjct: 401 YAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILI 460

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLCK  +L+ A  + +D+   G + +  TYN ++   CK     +A  LL++M  + + 
Sbjct: 461 YGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGII 520

Query: 516 PTSATYNILIDGLCVNGDLKNADCLL 541
           P + TY  LI  L    + + A+ LL
Sbjct: 521 PDAVTYETLIQALFHKDENEKAEKLL 546



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 227/451 (50%), Gaps = 1/451 (0%)

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           TP +++T +I+I+  C  + +  A   + +     + P  ++ N ++   C  G  + A 
Sbjct: 100 TP-DIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEAL 158

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
                +L  G H D FSY  LI+GLC  G    AL+    +    V+ + + Y+ +    
Sbjct: 159 HFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSL 218

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +  A+++  +++ K   PD+VT++ LI G+C +G +EE   L   M+ +    + 
Sbjct: 219 CKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDY 278

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             +++L+ ++CK G +  A  +L  M   G+ P++VTYS L+ G C  ++V+KA  + N 
Sbjct: 279 YTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNT 338

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           +     +PN+ ++  ++ G C+ +M+ EA   F+ +       D V YN +IDG  K G 
Sbjct: 339 ISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGR 398

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I  A +L  ++ +     +I T+N LI   CKN  V  A  L+  IK  G++P   T+  
Sbjct: 399 ISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNI 458

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +   C+ G ++    + Q++ +K       TY +++ GLCK+    EA  LL  M   G
Sbjct: 459 LIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNG 518

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           + PD +TY T+I++     +  KA +LL +M
Sbjct: 519 IIPDAVTYETLIQALFHKDENEKAEKLLREM 549



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 219/450 (48%), Gaps = 16/450 (3%)

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  + ++L   G  PDI T+ +LI  YC +  +     +   +L  G++ + I ++ L+ 
Sbjct: 87  AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIK 146

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C +G++ EAL     + A+G   D  +Y  LI GLCK  +   A+Q+  ++  K +  
Sbjct: 147 GLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKI 206

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N   +  I+  LC+ +++ +A   +  +I      DVV ++ +I G+  +G + EA  L+
Sbjct: 207 NVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLF 266

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           R+++ K I+P   TFN L+   CK G +  A+ +L  +   G+ P+ VTY++ M+ YC  
Sbjct: 267 REMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLV 326

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
             + +   +L  +      P   +Y  +I G CK   + EA+ L  DM   G+ PD++TY
Sbjct: 327 NQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTY 386

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           N++I   CK   +  A++L+++M  +       TYN LID LC N  +  A  L+  +++
Sbjct: 387 NSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKD 446

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS---------------IRDY 591
             I      +  +I   C  G +  A   F  ++ KG+ ++               + D 
Sbjct: 447 QGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDE 506

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIA-FHQ 620
            ++    M  NG  PD    E ++ A FH+
Sbjct: 507 AEALLSKMDDNGIIPDAVTYETLIQALFHK 536



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 192/370 (51%), Gaps = 3/370 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIM--WDLYDDIKVSETPRNVY 64
           + G    A+ ++ K+    +K+++  YN+++ +L +H  ++  ++LY  +   +   +V 
Sbjct: 185 KIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVV 244

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S +I G C   +L++A    +E   K   P   + N ++   CK G  + AK +  +M
Sbjct: 245 TFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVM 304

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +K G+ P+  +Y+ L+ G C+   + +A    N + + G  P+A +Y  +  GF  +  +
Sbjct: 305 MKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMV 364

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +   +  KG  PD VTY  LI G C+ G +    +L + M   G   N+  Y+ L
Sbjct: 365 DEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCL 424

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           + ++CK+  +D+A+ L+ +++  G++PD+ T++ILI GLCK  ++  A  ++ ++ SK  
Sbjct: 425 IDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGY 484

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           S N++ +  ++ GLC++ +  EA      +  +  I D V Y  +I          +A +
Sbjct: 485 SVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEK 544

Query: 365 LYRQLIEKRI 374
           L R++I + +
Sbjct: 545 LLREMIARDV 554



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 215/461 (46%), Gaps = 58/461 (12%)

Query: 237 NVIAYSVLLSSMCKSG--RIDEALGLLYEMEAVGLKPDLVTYSI---------------- 278
           ++I ++ +L S+ KS       A+ L   +E  G+ PD+ T++I                
Sbjct: 65  SIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFS 124

Query: 279 -------------------LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
                              LI+GLC   KV +A+  ++ + +     + F++G ++ GLC
Sbjct: 125 MMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLC 184

Query: 320 EKEMITEARMYFDSL--IMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           +   I E R     L  I    ++ +VV+YN +ID   K   + +A +LY Q+I K+ISP
Sbjct: 185 K---IGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISP 241

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            +VTF++LIYGFC  G++ +A  L   + L  + P   T+   ++A C+EGN++    +L
Sbjct: 242 DVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNML 301

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
             M  + + P  VTY+ ++ G C   ++ +A  +L  +  +G  P+  +Y T+I  FCK 
Sbjct: 302 VVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKI 361

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
           K + +A  L N M    + P   TYN LIDGLC +G +  A  L+  + ++        Y
Sbjct: 362 KMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTY 421

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLS 601
             +I A C    V +A+    ++ ++G +  +  +                +  F  +LS
Sbjct: 422 NCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLS 481

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            G+  +     +M+    + G       L + M  +G++PD
Sbjct: 482 KGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPD 522



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 151/321 (47%), Gaps = 15/321 (4%)

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D+  +NI+I+ Y  +  +  A  +  ++++    P  +TFN+LI G C NGKV +A    
Sbjct: 102 DIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFH 161

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           D +   G      +Y T +N  C+ G  +  L +L++++ K +    V Y  +I  LCK 
Sbjct: 162 DHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKH 221

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
             + +A +L   M    ++PD +T++ +I  FC    L +AF L  +M L N+ P   T+
Sbjct: 222 KLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTF 281

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF------ 575
           NIL+D LC  G+LK A  +LV + +  +    V Y++++  +C    V+KA         
Sbjct: 282 NILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQ 341

Query: 576 ---------FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
                    +C M+    +I + D   S F  M   G  PD+     ++    + G +  
Sbjct: 342 MGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISY 401

Query: 627 VFELAAVMIKSGLLPDKFLIN 647
            +EL   M  +G   + F  N
Sbjct: 402 AWELVDEMHDNGQPANIFTYN 422



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 171/333 (51%), Gaps = 3/333 (0%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTNS 67
           +V DA  + ++M    +   + T+++L+Y    +   +  + L+ ++ +     + YT +
Sbjct: 223 LVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFN 282

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I++D LC++  L+ A   L     +   P+VV+ +++M  YC +     AK +   + + 
Sbjct: 283 ILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQM 342

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  P+A SY  +I+G C    ++EAL   NDM   G+ PD +TY+ L  G     +IS A
Sbjct: 343 GAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYA 402

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W+++ ++   G   +I TY  LI   C+  +V++ + L + +  QG + ++  +++L+  
Sbjct: 403 WELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYG 462

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK GR+  A  +  ++ + G   +  TY+I++ GLCK+    +A  L ++M    I P+
Sbjct: 463 LCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPD 522

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
           +  +  ++  L  K+   +A      +I  + +
Sbjct: 523 AVTYETLIQALFHKDENEKAEKLLREMIARDVV 555



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 126/287 (43%), Gaps = 22/287 (7%)

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK--NGKVADARRLLDTIKLHGLEPSAVT 415
           ++   V  +  L+  + + SI+ FN ++    K  N     A  L   ++ HG+ P   T
Sbjct: 46  DVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFT 105

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           +   +N YC    +    +++ ++      P  +T+  +IKGLC   K++EA+   + + 
Sbjct: 106 FNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVL 165

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            +G   DQ +Y T+I   CK  + R A Q+L ++    ++     YN +ID LC +  + 
Sbjct: 166 ALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVI 225

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF 595
           +A  L   +    IS   V ++ +I   C  G + +A   F +MV K             
Sbjct: 226 DAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNIN---------- 275

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                     PD     +++ A  + G+L     +  VM+K G++P+
Sbjct: 276 ----------PDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPN 312


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 157/607 (25%), Positives = 289/607 (47%), Gaps = 22/607 (3%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVS 57
           L   Y  +G +  A+ +   ++E+ +   ++   NSLL  L  +   D+   LYD +  +
Sbjct: 132 LILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQT 191

Query: 58  ETPRNV----YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +         YT SIV+ GLC   ++++    +++  GK   P VV  N I+  YCK G 
Sbjct: 192 DDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGD 251

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            + A      +   G+ P   +Y  LI+G C AG  E   +   +M   G+  +   ++ 
Sbjct: 252 LQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNN 311

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +         ++ A + ++++   G  PDI TY  +I   C+ G ++E  +  E    +G
Sbjct: 312 VIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERG 371

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              N  +Y+ L+ + CK G   +A G+L+ +  +G KPDLV+Y   I G+    ++  A+
Sbjct: 372 LLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVAL 431

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            +  +M  K + P++  +  ++ GLC+       ++    ++  N   DV ++  ++DG+
Sbjct: 432 MVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGF 491

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           ++ G + EA+++++ +I K + P IV +N++I GFCK GK+ DA   L+ +K     P  
Sbjct: 492 IRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDE 551

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            TY+T ++ Y ++ ++   L +  +M      P  +TYT +I G CK+  +  A ++   
Sbjct: 552 YTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRG 611

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG- 532
           M    + P+ +TY T++  F K     KA  +   M ++   P  AT++ LI+GL     
Sbjct: 612 MKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTAT 671

Query: 533 ---------DLKNADCLLVSLQEHNIS----LTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
                     ++N   L++      +S        AY ++I   C  G V  A     +M
Sbjct: 672 SPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKM 731

Query: 580 VEKGFEI 586
           + KGF I
Sbjct: 732 LTKGFLI 738



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/550 (26%), Positives = 256/550 (46%), Gaps = 37/550 (6%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY----GLHPDAFSYNILIHGLCIAGSMEE 151
           P+VV+ N++++   K G  +VA  L+  ML+     G   D ++ +I++ GLC  G +EE
Sbjct: 160 PTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEE 219

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
                 D    G  P  + Y+++  G+     +  A + +++L +KG  P + TY  LI 
Sbjct: 220 GRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALIN 279

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           G+C+ G  E   +L   M ++G  +NV  ++ ++ +  K G + +A   +  M  +G  P
Sbjct: 280 GFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGP 339

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK-EMITEARMY 330
           D+ TY+ +I   CK  ++ +A +   +   + + PN F++  ++   C++ + +  A M 
Sbjct: 340 DITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGML 399

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           F    +     D+V Y   I G V  G I  A+ +  +++EK + P    +N L+ G CK
Sbjct: 400 FRIAEIGE-KPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCK 458

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           NG+    + LL  +    ++P    + T M+ +   G +   + + + +  K + P  V 
Sbjct: 459 NGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVG 518

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  +IKG CK  K+ +A+  L  M  +   PD+ TY+T+I  + K  D+  A ++  QM 
Sbjct: 519 YNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMM 578

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
            H  +P   TY  LI+G C   D+  A+ +   ++  ++    V YTT++      G   
Sbjct: 579 KHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPE 638

Query: 571 KAMTFFCQMVEKG-------FEISIRDYTKS----------------------FFCMMLS 601
           KA + F  M+  G       F   I   T +                      FF MMLS
Sbjct: 639 KATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLS 698

Query: 602 NGFPPDQEIC 611
            G+  DQ I 
Sbjct: 699 EGW--DQVIA 706



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/546 (24%), Positives = 248/546 (45%), Gaps = 24/546 (4%)

Query: 84  LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK-YGLHPDAFSYNILIHG 142
           L L+    +   P+  + +A++  Y + G  + A  LF  + + +   P   + N L++G
Sbjct: 112 LVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNG 171

Query: 143 LCIAGSMEEALEFTNDMGRH----GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           L  +G ++ AL+  + M +     G   D  T SI+ KG   L +I    ++++    KG
Sbjct: 172 LVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKG 231

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P +V Y ++I GYC+ G+++   +  + +  +G    V  Y  L++  CK+G  +   
Sbjct: 232 CVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVD 291

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            LL EM A GL  ++  ++ +I    K   V KA +    M      P+   +  ++   
Sbjct: 292 QLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFS 351

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C+   I EA  + +       + +   Y  ++  Y K G+  +A  +  ++ E    P +
Sbjct: 352 CKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDL 411

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           V++ + I+G   +G++  A  + + +   G+ P A  Y   M+  C+ G    +  LL E
Sbjct: 412 VSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSE 471

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M  + + P    +  ++ G  +  +L EA+++ + +   GV P  + YN +I+ FCK   
Sbjct: 472 MLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGK 531

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           +  A   LN+M   +  P   TY+ +IDG     D+ +A  +   + +H      + YT+
Sbjct: 532 MTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTS 591

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEI--SIRDYT---------------KSFFCMMLS 601
           +I   C + D+ +A   F  M  K F++  ++  YT                S F +ML 
Sbjct: 592 LINGFCKKADMIRAEKVFRGM--KSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLM 649

Query: 602 NGFPPD 607
           NG PP+
Sbjct: 650 NGCPPN 655



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/462 (23%), Positives = 205/462 (44%), Gaps = 49/462 (10%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T + +I+  C+  R+++A  FL++   +   P+  S   +M  YCK G    A G+ 
Sbjct: 340 DITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGML 399

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             + + G  PD  SY   IHG+ + G ++ AL     M   GV PDA  Y++L  G    
Sbjct: 400 FRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKN 459

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +      ++ ++L +   PD+  +  L+ G+ + G ++E +K+ +V++ +G    ++ Y
Sbjct: 460 GRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGY 519

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++   CK G++ +AL  L +M+ V   PD  TYS +I G  KQ  +  A++++ +M  
Sbjct: 520 NAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMK 579

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
            +  PN   + +++ G C+K  +  A   F  +   + + +VV Y  ++ G+ K G   +
Sbjct: 580 HKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEK 639

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYG---------------------------------- 387
           A  ++  ++     P+  TF+ LI G                                  
Sbjct: 640 ATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSE 699

Query: 388 ---------------FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
                           CK+G V  A+ LL  +   G    +V +T  ++  C +G  +  
Sbjct: 700 GWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEW 759

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
             ++     K    T V Y++ +     Q +L EA  +L+ +
Sbjct: 760 RNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTL 801



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 184/395 (46%), Gaps = 22/395 (5%)

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNE-MCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           D V +S L++ L    +V   I+L  E M ++ + P   A  A++L   E   +  A   
Sbjct: 90  DGVAHSSLLK-LLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQL 148

Query: 331 FDSLI-MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV----TFNSLI 385
           F ++  M NC+  VV  N +++G VK G +  A+QLY ++++       V    T + ++
Sbjct: 149 FHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVV 208

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G C  GK+ + RRL+      G  P  V Y   ++ YC++G++Q     L+E++ K + 
Sbjct: 209 KGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVL 268

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           PT  TY  +I G CK  + +   QLL +M   G+  +   +N +I +  K   + KA + 
Sbjct: 269 PTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAET 328

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           + +M      P   TYN +I+  C  G +K AD  L   +E  +   K +YT ++ A+C 
Sbjct: 329 MRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCK 388

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM---------------MLSNGFPPDQEI 610
           +GD  KA     ++ E G +  +  Y      +               M+  G  PD +I
Sbjct: 389 QGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQI 448

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
             V++    + G   ++  L + M+   + PD ++
Sbjct: 449 YNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYV 483



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 194/449 (43%), Gaps = 22/449 (4%)

Query: 215 QIGNVEEGLKLREVMLSQGFK--LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           ++ + E  LK  +   ++ F   L+ +A+S LL  +       E   +L  M+A  LKP 
Sbjct: 66  RVHDAELALKFFDWASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPT 125

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCS-KRISPNSFAHGAILLGLCEKEMITEARMYF 331
              +S LI    +   + +A+QL++ +       P   A  ++L GL +   +  A   +
Sbjct: 126 REAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLY 185

Query: 332 DSLIMSN----CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           D ++ ++     + D    +I++ G   LG I E  +L +    K   P +V +N +I G
Sbjct: 186 DKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDG 245

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           +CK G +  A R L  +K+ G+ P+  TY   +N +C+ G  + +  LL EM  + +   
Sbjct: 246 YCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMN 305

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
              +  VI    K   + +A + +  M  +G  PD  TYNT+I   CK   +++A + L 
Sbjct: 306 VKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLE 365

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +     L P   +Y  L+   C  GD   A  +L  + E       V+Y   I      G
Sbjct: 366 KAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHG 425

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICE 612
           ++  A+    +M+EKG     + Y                K     ML     PD  +  
Sbjct: 426 EIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFA 485

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            ++  F + G+L    ++  V+I+ G+ P
Sbjct: 486 TLMDGFIRNGELDEAIKIFKVIIRKGVDP 514



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 120/272 (44%), Gaps = 25/272 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           + R G + +A+ +   +    +   I  YN+++       + TD +  L     V   P 
Sbjct: 491 FIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAP- 549

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + YT S VIDG  +Q  +  A+    +    +F P+V++  ++++ +CK      A+ +F
Sbjct: 550 DEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVF 609

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M  + L P+  +Y  L+ G   AG  E+A      M  +G  P+  T+  L  G   L
Sbjct: 610 RGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLING---L 666

Query: 182 SQISGAWKVIQK-----------------LLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
           +  + +  +I++                 +L +G D  I  Y  +I   C+ G V+    
Sbjct: 667 TNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQL 726

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           L   ML++GF ++ + ++ +L  +C  G+  E
Sbjct: 727 LLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKE 758


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 160/570 (28%), Positives = 285/570 (50%), Gaps = 32/570 (5%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGK--EFG--PSVVS 100
           D  W + +++K S       T S++I    +    + A+    E+ GK  +FG  P V +
Sbjct: 113 DTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAV----ESFGKMKDFGCKPDVFT 168

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
            N+I+    +     +A  ++  MLK   +P+  ++ IL++GLC  G  ++AL+  ++M 
Sbjct: 169 YNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMT 228

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
           + G+ P+ + Y+I+  G     +     +++  + + G  PD +T   L+ G+C++G ++
Sbjct: 229 QKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQID 288

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
           E   L ++   +G+ L +  YS L+  + ++ R DE      +M   G++PD+V Y+ILI
Sbjct: 289 EAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILI 348

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
           RG C+   V  A+ + N+M  + +SP+++ + A++ G C+  ++ +AR     +  ++C 
Sbjct: 349 RGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCF 408

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
                Y I+I G  + G + EA Q++ Q+     SPSI+TFN+LI G CK G++ +AR L
Sbjct: 409 PTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHL 468

Query: 401 LDTIKLHGLEPS--------------AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
              +++ G  PS                +  T +   CE G I +   LL ++    + P
Sbjct: 469 FYKMEI-GKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVP 527

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             +TY V+I G CK   +  A +L  ++ + G +PD +TY T+I  F +      AF++L
Sbjct: 528 DIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVL 587

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL----LVSLQEHNISLTKVAYTTIIKA 562
           +QM  +   P+SA Y  L+   C  G L  A  L    L SL        K+A     + 
Sbjct: 588 DQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLA-----EE 642

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           H  +G++ KA+    +M  K     I  YT
Sbjct: 643 HFEKGELEKAVRCLLEMNFKLNNFEIAPYT 672



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 165/609 (27%), Positives = 283/609 (46%), Gaps = 25/609 (4%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDD-IKV 56
           +L   Y+++GM   AV    KMK+   K  + TYNS+L+ +   ++      +Y+  +K+
Sbjct: 136 VLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKL 195

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           +  P N  T  I+++GLC+  +  DA+    E   K   P+ +    I+S  C+    + 
Sbjct: 196 NYNP-NRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDD 254

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
              L   M   G  PD+ + N L+ G C  G ++EA        + G       YS L  
Sbjct: 255 VHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLID 314

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G     +     +  +K+   G +PD+V YT+LI G+C++G V+  L +   M  +G   
Sbjct: 315 GLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSP 374

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +   Y+ L+   C  G +D+A  L  E+      P   TY+ILI G+C+   + +A Q++
Sbjct: 375 DTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIF 434

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF--------DSLIM-----SNCIQDV 343
           N+M +   SP+     A++ GLC+   + EAR  F         SL +     ++ + D 
Sbjct: 435 NQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDT 494

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
                M++   + G I +A +L  QL +  + P I+T+N LI GFCK   +  A +L   
Sbjct: 495 ASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRE 554

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           ++L G  P +VTY T ++ +      +    +L +M      P+   Y  ++   C++ K
Sbjct: 555 LQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGK 614

Query: 464 LQEAVQL-LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM--WLHNLEPTSAT 520
           L  A  L L+ +  +    D+ T       F K  +L KA + L +M   L+N E   A 
Sbjct: 615 LSVAFSLWLKYLRSLPSQEDE-TLKLAEEHFEK-GELEKAVRCLLEMNFKLNNFE--IAP 670

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y I + GLC     + A  + + L+E  + +   +   +I   C +G++  A+  F   +
Sbjct: 671 YTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTL 730

Query: 581 EKGFEISIR 589
           EKGF +  R
Sbjct: 731 EKGFMLMPR 739



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 218/485 (44%), Gaps = 34/485 (7%)

Query: 188 WKVIQKLLIKGSDPDIV--TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
           WK++++L  K S+  I   T++VLI  Y + G  E+ ++    M   G K +V  Y+ +L
Sbjct: 116 WKILEEL--KNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSIL 173

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             M +      AL +  +M  +   P+  T+ IL+ GLCK  K   A+++++EM  K I 
Sbjct: 174 HVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIP 233

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN+  +  IL GLC+ +   +     +++ +S C  D +  N ++DG+ KLG I EA  L
Sbjct: 234 PNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFAL 293

Query: 366 YRQLIEKR-ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
             QL EK      I  ++SLI G  +  +  + +     +   G+EP  V YT  +  +C
Sbjct: 294 L-QLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFC 352

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           E G +   L +L +M  + + P    Y  +IKG C    L +A  L  ++      P   
Sbjct: 353 EVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSC 412

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL---------- 534
           TY  +I   C+   L +A Q+ NQM      P+  T+N LIDGLC  G+L          
Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472

Query: 535 ---KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------F 584
              KN    L   Q  +  +   +  T+++  C  G + KA     Q+ + G       +
Sbjct: 473 EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTY 532

Query: 585 EISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
            + I  + K+         F  +   G  PD      ++  FH+       F +   M+K
Sbjct: 533 NVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVK 592

Query: 637 SGLLP 641
           +G  P
Sbjct: 593 NGCTP 597



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 170/354 (48%)

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + +++++  + K    D    +L E++   ++    T+S+LI    K     KA++ + +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M      P+ F + +IL  + +KE+   A   ++ ++  N   +   + I+++G  K G 
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             +A++++ ++ +K I P+ + +  ++ G C+  +  D  RLL+T+K+ G  P ++T   
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++ +C+ G I    ALLQ  E +        Y+ +I GL +  +  E  +    M+  G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           + PD + Y  +IR FC+   +  A  +LN M    L P +  YN LI G C  G L  A 
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            L + + +++   T   YT +I   C  G + +A   F QM   G   SI  + 
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFN 450



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 123/304 (40%), Gaps = 20/304 (6%)

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V +N++ID   K        ++  +L    I     TF+ LI  + K+G    A      
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +K  G +P   TY + ++   ++      LA+  +M      P   T+ +++ GLCK  K
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
             +A+++ ++M   G+ P+ + Y  I+   C+ K      +LLN M +    P S T N 
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L+DG C  G +  A  LL   ++    L    Y+++I                       
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGL-------------------- 316

Query: 584 FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           F     D  + +   M   G  PD  +  +++  F + G +     +   M + GL PD 
Sbjct: 317 FRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDT 376

Query: 644 FLIN 647
           +  N
Sbjct: 377 YCYN 380



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 151/359 (42%), Gaps = 54/359 (15%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETP---- 60
           R G++ +A  +  +M+ L    SI T+N+L+  L     + +   L+  +++ + P    
Sbjct: 423 RNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFL 482

Query: 61  -------RNVYTNSI--VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
                  R + T S+  +++ LC+   +  A   L + A     P +++ N +++ +CK 
Sbjct: 483 RLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKA 542

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
                A  LF  +   G  PD+ +Y  LI G       E+A    + M ++G  P +  Y
Sbjct: 543 KNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVY 602

Query: 172 SIL-----AKG-------------FHLLSQISGAWKVIQKLLIKG--------------- 198
             L      KG               L SQ     K+ ++   KG               
Sbjct: 603 KCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFK 662

Query: 199 -SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
            ++ +I  YT+ + G CQ    EE LK+  V+      +N  +  +L++ +CK G ++ A
Sbjct: 663 LNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMA 722

Query: 258 LGL-LYEME-AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           + + LY +E    L P +     L+R L  QDK+  A+ L N M S     + + H  I
Sbjct: 723 VDIFLYTLEKGFMLMPRICNQ--LLRSLILQDKMKHALDLLNRMNSAGYDLDEYLHHRI 779



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 92/230 (40%), Gaps = 26/230 (11%)

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           S VT+   ++   ++        +L+E++   I     T++V+I    K    ++AV+  
Sbjct: 95  SWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESF 154

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
             M   G  PD  TYN+I+    + +    A  + NQM   N  P  AT+ IL++GLC N
Sbjct: 155 GKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKN 214

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE---GDVHKAMTFFCQMVEKGFEISI 588
           G   +A  +   + +  I    + YT I+   C      DVH+ +               
Sbjct: 215 GKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLN-------------- 260

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
                     M  +G  PD   C  +L  F + G +   F L  +  K G
Sbjct: 261 ---------TMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEG 301


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 238/457 (52%), Gaps = 5/457 (1%)

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
           Q+    L   +G  F  + + ++ ++  Y K     +    F     YGL     S N L
Sbjct: 75  QEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPL 134

Query: 140 IHGLCIAGSMEEALEFT-NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           + GL   G + + +EF   +M R  +EP  I+++I+  G   + +++ A  +I+ + ++G
Sbjct: 135 MSGLVKVGEIGD-MEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREV---MLSQGFKLNVIAYSVLLSSMCKSGRID 255
              +++TY  LI GYC++G + +  K   +   M + G   N + +++L+   CK   + 
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVS 253

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
            A+ +  EM   G+KP++VTY+ LI GLC   KV++A  L ++M +  + PN   H A+L
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALL 313

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            G C+ +M+ +A   FD +       +V  YNI+ID Y K  N+ +A  LYR ++ K + 
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P + T+N LI G C+ G +  AR L+  +    L+   +TY   +++ C +G +++ L L
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           L EM  K + P+ +TY  +I G CK+  L+ A+ L   M  +G   +  TYN +I+ FCK
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
              L  A  LLN+M    L P   TY I+ + +   G
Sbjct: 494 KDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 229/462 (49%), Gaps = 42/462 (9%)

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           EA +  +D   +G++    + + L  G   + +I     V ++++ +  +P ++++ ++I
Sbjct: 114 EAFKRASD---YGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVI 170

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE---ALGLLYEMEAV 267
            G C++G + +   + E M  +G   NVI Y+ L+   CK G+I +   A  +L EM A 
Sbjct: 171 NGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRAD 230

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G+ P+ VT++ILI G CK   V  A++++ EM  + + PN                    
Sbjct: 231 GICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPN-------------------- 270

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                          VV YN +I+G    G + EA  L  Q++   + P+I+T N+L+ G
Sbjct: 271 ---------------VVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNG 315

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           FCKN  V  A  L D +   G+ P+  TY   ++AYC++ N++   AL + M  K + P 
Sbjct: 316 FCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPD 375

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TY  +I GLC++  L+ A  L+ +M    +  D ITYN +I S C   +++KA +LL+
Sbjct: 376 VSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLD 435

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M    L+P+  TYN +IDG C  G+L+ A  L   +++         Y  +IK  C + 
Sbjct: 436 EMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKD 495

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
            +  A     +M+EKG  I  R   +     M+  GF PD E
Sbjct: 496 KLEDANGLLNEMLEKGL-IPNRMTYEIVTEEMMEKGFVPDIE 536



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 197/389 (50%), Gaps = 3/389 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++ GL +   + D     +E   +   P+++S N +++  CK+G    A  +   M   G
Sbjct: 134 LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193

Query: 129 LHPDAFSYNILIHGLCIA---GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           +  +  +YN LI G C     G M +A     +M   G+ P+ +T++IL  GF     +S
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVS 253

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A KV  ++  +G  P++VTY  LI G C  G V E   LR+ M++   K N+I ++ LL
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALL 313

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           +  CK+  + +A  L  +M   G+ P++ TY+ILI   CK + +  A  LY  M  K + 
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+   +  ++ GLC K  +  AR     +   +   D++ YNI+ID     G + +A++L
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++  K + PS +T+N++I G+CK G +  A  L   ++  G   +  TY   +  +C+
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVV 454
           +  ++    LL EM  K + P  +TY +V
Sbjct: 494 KDKLEDANGLLNEMLEKGLIPNRMTYEIV 522



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 198/412 (48%), Gaps = 23/412 (5%)

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
           F  N I   +L+ +  K+ R              GLK  + + + L+ GL K  ++    
Sbjct: 89  FCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDME 148

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            +Y EM  +RI P   +   ++ GLC+   + +A    + + +     +V+ YN +IDGY
Sbjct: 149 FVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGY 208

Query: 354 VKLGNIGE---AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            K+G IG+   A  + +++    I P+ VTFN LI GFCK+  V+ A ++   +   G++
Sbjct: 209 CKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVK 268

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+ VTY + +N  C  G +    AL  +M    + P  +T+  ++ G CK   +++A +L
Sbjct: 269 PNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGEL 328

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
            +DM   G+TP+  TYN +I ++CK +++  AF L   M    + P  +TYN LI GLC 
Sbjct: 329 FDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCR 388

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            GDL+ A  L+  +   ++    + Y  +I + C +G++ KA+    +M  KG       
Sbjct: 389 KGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGL------ 442

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                          P Q     M+  + + G+L +   L + M K G L +
Sbjct: 443 --------------KPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLAN 480



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 216/433 (49%), Gaps = 6/433 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDL---YDDIKVS 57
           +L + Y++            +  +  LK+S+ + N L+  L     + D+   Y ++   
Sbjct: 98  ILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRR 157

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE-- 115
                + + +IVI+GLC+  +L  A   +++   +    +V++ N ++  YCK+G     
Sbjct: 158 RIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKM 217

Query: 116 -VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
             A  +   M   G+ P+  ++NILI G C   ++  A++   +M R GV+P+ +TY+ L
Sbjct: 218 YKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSL 277

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G     +++ A  +  +++     P+I+T+  L+ G+C+   V++  +L + M  QG 
Sbjct: 278 INGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGI 337

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             NV  Y++L+ + CK   +++A  L   M   G+ PD+ TY+ LI GLC++  +  A  
Sbjct: 338 TPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARN 397

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L +EM +K +  +   +  ++  LC K  + +A    D +         + YN MIDGY 
Sbjct: 398 LVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYC 457

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K GN+  A+ L  Q+ +     ++ T+N LI GFCK  K+ DA  LL+ +   GL P+ +
Sbjct: 458 KEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRM 517

Query: 415 TYTTFMNAYCEEG 427
           TY        E+G
Sbjct: 518 TYEIVTEEMMEKG 530



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 138/265 (52%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + +I+GLC   ++ +A     +       P++++ NA+++ +CK    + A  LF
Sbjct: 270 NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELF 329

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M K G+ P+  +YNILI   C   +ME+A      M   GV PD  TY+ L  G    
Sbjct: 330 DDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRK 389

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A  ++ ++  K    D++TY +LI   C  G +++ L+L + M  +G K + + Y
Sbjct: 390 GDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTY 449

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++   CK G +  AL L  +ME VG   ++ TY++LI+G CK+DK+  A  L NEM  
Sbjct: 450 NTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLE 509

Query: 302 KRISPNSFAHGAILLGLCEKEMITE 326
           K + PN   +  +   + EK  + +
Sbjct: 510 KGLIPNRMTYEIVTEEMMEKGFVPD 534


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 248/466 (53%), Gaps = 13/466 (2%)

Query: 49  DLYDDIKVSET-----PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNA 103
           DL + I++ E+     P      + +I  LC   R  +A   L         P V+S NA
Sbjct: 71  DLEEAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEARRVLASCE-----PDVMSYNA 125

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           +++ YC  G  + A+ L   M    + PD ++YN LI GLC  G  + AL   +DM R G
Sbjct: 126 MVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRG 182

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
             PD +TY+IL +     S    A K++ ++  KG  PDIVTY V++ G CQ G V++ +
Sbjct: 183 CVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAM 242

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           +  + + S G + N ++Y+++L  +C + R ++A  L+ EM   G  P++VT+++LI  L
Sbjct: 243 EFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFL 302

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           C++  V  A+++ +++     +PNS ++  IL   C+++ +  A  + + ++ S C  D+
Sbjct: 303 CRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDI 362

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V YN ++    + G +  AV+L  QL +K  +P ++++N++I G  K GK  +A  LL+ 
Sbjct: 363 VSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNE 422

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +   GL+P  +TY+T  +  C EG I+  +    +++   I P  V Y  ++ GLCK+  
Sbjct: 423 MVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRA 482

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
              A+ L   M   G  P++ TY  +I        +++A +++ ++
Sbjct: 483 THSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL 528



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 241/478 (50%), Gaps = 11/478 (2%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVV-SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           L ++  L++AI  ++  AG E  PS      A++ + C  G    A+ +          P
Sbjct: 66  LVRRGDLEEAIRLVESMAGLE--PSAAGPCAALIKKLCASGRTAEARRVLA-----SCEP 118

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  SYN ++ G C+ G ++ A      M    +EPD  TY+ L +G     +   A  V+
Sbjct: 119 DVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVL 175

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             +L +G  PD+VTYT+L+   C+    ++ +KL + M  +G   +++ Y+V+++ +C+ 
Sbjct: 176 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQE 235

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           GR+D+A+  L  + + G +P+ V+Y+I+++GLC  ++   A +L  EM  K   PN    
Sbjct: 236 GRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTF 295

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++  LC + ++  A    D +    C  + + YN ++  + K   +  A+     ++ 
Sbjct: 296 NMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVS 355

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
               P IV++N+L+   C+ G+V  A  LL  +K  G  P  ++Y T ++   + G  + 
Sbjct: 356 SGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEE 415

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            L LL EM TK + P  +TY+ +  GLC++ +++EA++    +  +G+ P+ + YN I+ 
Sbjct: 416 ALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILL 475

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
             CK +    A  L   M  +   P  +TY ILI+GL   G +K A  ++  L    +
Sbjct: 476 GLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 224/447 (50%), Gaps = 11/447 (2%)

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ-KLLIKGSDPDIVT 205
           G +EEA+     M   G+EP A           L+ ++  + +  + + ++   +PD+++
Sbjct: 70  GDLEEAIRLVESMA--GLEPSAA-----GPCAALIKKLCASGRTAEARRVLASCEPDVMS 122

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y  ++ GYC  G ++     R ++ +   + +   Y+ L+  +C  GR D AL +L +M 
Sbjct: 123 YNAMVAGYCVTGQLDNA---RRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDML 179

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G  PD+VTY+IL+   CK+    +A++L +EM  K  +P+   +  ++ G+C++  + 
Sbjct: 180 RRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVD 239

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +A  +  SL    C  + V YNI++ G        +A +L  ++  K   P++VTFN LI
Sbjct: 240 DAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLI 299

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
              C+ G V  A  +LD I  +G  P++++Y   ++A+C++  + R +A ++ M +    
Sbjct: 300 SFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCY 359

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  V+Y  ++  LC+  ++  AV+LL  +   G TP  I+YNT+I    K     +A +L
Sbjct: 360 PDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALEL 419

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           LN+M    L+P   TY+ +  GLC  G ++ A      +Q+  I    V Y  I+   C 
Sbjct: 420 LNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCK 479

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYT 592
               H A+  F  MV  G   +   YT
Sbjct: 480 RRATHSAIDLFTYMVSNGCMPNESTYT 506



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 226/457 (49%), Gaps = 9/457 (1%)

Query: 128 GLHPDAFSY-NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           GL P A      LI  LC +G   EA            EPD ++Y+ +  G+ +  Q+  
Sbjct: 84  GLEPSAAGPCAALIKKLCASGRTAEARRVL-----ASCEPDVMSYNAMVAGYCVTGQLDN 138

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +++  + +   +PD  TY  LI G C  G  +  L + + ML +G   +V+ Y++LL 
Sbjct: 139 ARRLVAAMPM---EPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLE 195

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           + CK     +A+ LL EM   G  PD+VTY++++ G+C++ +V  A++    + S    P
Sbjct: 196 ATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEP 255

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N+ ++  +L GLC  E   +A      +       +VV +N++I    + G +  A+++ 
Sbjct: 256 NTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEIL 315

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            Q+ +   +P+ +++N +++ FCK  K+  A   ++ +   G  P  V+Y T + A C  
Sbjct: 316 DQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRG 375

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +   + LL +++ K   P  ++Y  VI GL K  K +EA++LL +M   G+ PD ITY
Sbjct: 376 GEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITY 435

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           +TI    C+   + +A +   ++    + P +  YN ++ GLC      +A  L   +  
Sbjct: 436 STISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVS 495

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +     +  YT +I+    EG V +A     ++  +G
Sbjct: 496 NGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRG 532



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 207/407 (50%), Gaps = 6/407 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y  TG + +A  ++A M    ++    TYN+L+  L     TD    + DD+       +
Sbjct: 130 YCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPD 186

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T +I+++  C++S  + A+  L E   K   P +V+ N +++  C+ G  + A     
Sbjct: 187 VVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLK 246

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +  YG  P+  SYNI++ GLC A   E+A +   +M R G  P+ +T+++L        
Sbjct: 247 SLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRG 306

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A +++ ++   G  P+ ++Y  ++  +C+   ++  +   E+M+S G   ++++Y+
Sbjct: 307 LVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYN 366

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            LL+++C+ G +D A+ LL++++  G  P L++Y+ +I GL K  K  +A++L NEM +K
Sbjct: 367 TLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTK 426

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   +  I  GLC +  I EA   F  +       + VLYN ++ G  K      A
Sbjct: 427 GLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSA 486

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           + L+  ++     P+  T+  LI G    G V +AR ++  +   G+
Sbjct: 487 IDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 175/363 (48%), Gaps = 31/363 (8%)

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG-LCEKEMITEARMYFDSLIMSN 338
           +R L ++  + +AI+L   M    + P++    A L+  LC      EAR      ++++
Sbjct: 63  LRVLVRRGDLEEAIRLVESMAG--LEPSAAGPCAALIKKLCASGRTAEARR-----VLAS 115

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           C  DV+ YN M+ GY   G +  A +L   +    + P   T+N+LI G C  G+  +A 
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNAL 172

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            +LD +   G  P  VTYT  + A C+    ++ + LL EM  K   P  VTY VV+ G+
Sbjct: 173 AVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGI 232

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           C++ ++ +A++ L+ +   G  P+ ++YN +++  C  +    A +L+ +M      P  
Sbjct: 233 CQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNV 292

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            T+N+LI  LC  G ++ A  +L  + ++  +   ++Y  I+ A C +  + +AM F   
Sbjct: 293 VTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF--- 349

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
            VE                +M+S+G  PD      +L A  +GG++ +  EL   +   G
Sbjct: 350 -VE----------------LMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 392

Query: 639 LLP 641
             P
Sbjct: 393 CTP 395


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 157/581 (27%), Positives = 287/581 (49%), Gaps = 18/581 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAK 118
           +V++ + ++ GLC ++R Q+A+  L   A    G   P VVS N +++ + K G ++ A 
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAY 221

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             +  ML  G+ PD  +Y+ +I  LC A +M++A+E  N M ++GV PD +TY+ +  G+
Sbjct: 222 STYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 281

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               Q   A   ++K+   G +P++VTY+ L+   C+ G   E  K+ + M  +G + ++
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y  LL      G + E   LL  M   G++PD   ++ILI    KQ+KV +A+ ++++
Sbjct: 342 ATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M    ++PN   +G ++  LC+   + +A +YF+ +I      ++++Y  +I G      
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             +A +L  +++++ I  + + FNS+I   CK G+V ++ +L D +   G++P  +TY T
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++  C  G +     LL  M +  + P  VTY  +I G C+  ++ +A+ L ++M   G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           V+P+ ITYN I++     +    A +L   +     +   +TYNI++ GLC N     A 
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 641

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------ 592
            +  +L   ++ L    +  +I A    G + +A   F      G    +R Y+      
Sbjct: 642 RMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENL 701

Query: 593 ---------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
                       F  M  NG   D  +   ++    Q GD+
Sbjct: 702 IEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDI 742



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 162/607 (26%), Positives = 279/607 (45%), Gaps = 23/607 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAK 118
           +  T + ++ GLC   R  DA+ + L+     E G  P V S N ++   C    ++ A 
Sbjct: 126 DAITFTPLLKGLCADKRTSDAMDIVLRRMT--ELGCIPDVFSYNNLLKGLCDENRSQEAL 183

Query: 119 GLFCLMLK---YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            L  +M      G  PD  SYN +++G    G  ++A    ++M   G+ PD +TYS + 
Sbjct: 184 ELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSII 243

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                   +  A +V+  ++  G  PD +TY  ++ GYC  G  +E +   + M S G +
Sbjct: 244 AALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 303

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            NV+ YS L++ +CK+GR  EA  +   M   GL+PD+ TY  L++G   +  + +   L
Sbjct: 304 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHAL 363

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
            + M    I P+      ++    ++E + +A + F  +       +VV Y  +ID   K
Sbjct: 364 LDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 423

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G++ +A+  + Q+I++ ++P+I+ + SLI+G C   K   A  L+  +   G+  + + 
Sbjct: 424 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIF 483

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           + + ++++C+EG +     L   M    + P  +TY  +I G C   K+ EA +LL  M 
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            +GV PD +TY T+I  +C+   +  A  L  +M    + P   TYNI++ GL       
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 603

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF-------CQMVEKGFEISI 588
            A  L VS+ +    L    Y  I+   C      +A+  F        Q+  + F I I
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 663

Query: 589 --------RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                    D  K  F    +NG  PD     +M     + G L  + +L   M ++G  
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723

Query: 641 PDKFLIN 647
            D  ++N
Sbjct: 724 ADSRMLN 730



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 147/563 (26%), Positives = 253/563 (44%), Gaps = 61/563 (10%)

Query: 80  QDAILFLQETAGKEFGPSVVSLN------------AIMSRYCKLGFAEVAKGLFCLMLKY 127
           +DA     E   +  G S+  LN            A +SRY ++  A   K         
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGK--------- 87

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            + P   +Y ILI   C AG ++       ++ + G   DAIT++ L KG     + S A
Sbjct: 88  -VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146

Query: 188 WKVIQKLLIK---------------------------------------GSDPDIVTYTV 208
             ++ + + +                                       GS PD+V+Y  
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           ++ G+ + G+ ++       ML +G   +V+ YS +++++CK+  +D+A+ +L  M   G
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           + PD +TY+ ++ G C   +  +AI    +M S  + PN   + +++  LC+    TEAR
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             FDS+       D+  Y  ++ GY   G + E   L   ++   I P    FN LI  +
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            K  KV  A  +   ++ HGL P+ V Y T ++  C+ G++   +   ++M  + + P  
Sbjct: 387 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNI 446

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           + YT +I GLC   K  +A +L+ +M   G+  + I +N+II S CK   + ++ +L + 
Sbjct: 447 IVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 506

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    ++P   TYN LIDG C+ G +  A  LL S+    +    V Y T+I  +C    
Sbjct: 507 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 566

Query: 569 VHKAMTFFCQMVEKGFEISIRDY 591
           +  A+  F +MV  G   +I  Y
Sbjct: 567 MDDALALFKEMVSSGVSPNIITY 589



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 240/544 (44%), Gaps = 71/544 (13%)

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           D+ RH        Y+ +A+        +GA KV          P + TY +LI   C+ G
Sbjct: 64  DVARHSPAAAVSRYNRMAR--------AGAGKVT---------PTVHTYAILIGCCCRAG 106

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL-LYEMEAVGLKPDLVTY 276
            ++ G      ++ +GF+++ I ++ LL  +C   R  +A+ + L  M  +G  PD+ +Y
Sbjct: 107 RLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSY 166

Query: 277 SILIRGLCKQDKVHKAIQL--------------------------------------YNE 298
           + L++GLC +++  +A++L                                      Y+E
Sbjct: 167 NNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHE 226

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  + I P+   + +I+  LC+ + + +A    ++++ +  + D + YN ++ GY   G 
Sbjct: 227 MLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 286

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             EA+   +++    + P++VT++SL+   CKNG+  +AR++ D++   GLEP   TY T
Sbjct: 287 PKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRT 346

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +  Y  +G +  + ALL  M    I P H  + ++I    KQ K+ +A+ +   M   G
Sbjct: 347 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG 406

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           + P+ + Y T+I   CK   +  A     QM    L P    Y  LI GLC       A+
Sbjct: 407 LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAE 466

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI---------- 588
            L++ + +  I L  + + +II +HC EG V ++   F  MV  G +  I          
Sbjct: 467 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGC 526

Query: 589 -----RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                 D        M+S G  PD      ++  + +   +     L   M+ SG+ P+ 
Sbjct: 527 CLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNI 586

Query: 644 FLIN 647
              N
Sbjct: 587 ITYN 590



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 220/484 (45%), Gaps = 36/484 (7%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K    P  +  NSI + G C   + ++AI  L++       P+VV+ +++M+  CK G 
Sbjct: 263 VKNGVMPDCMTYNSI-LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
           +  A+ +F  M K GL PD  +Y  L+ G    G++ E     + M R+G++PD   ++I
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L   +    ++  A  V  K+   G +P++V Y  +I   C+ G+V++ +   E M+ +G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441

Query: 234 FKLNVIAYSVLL-----------------------------------SSMCKSGRIDEAL 258
              N+I Y+ L+                                    S CK GR+ E+ 
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L   M  +G+KPD++TY+ LI G C   K+ +A +L   M S  + P+   +G ++ G 
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C    + +A   F  ++ S    +++ YNI++ G         A +LY  + +      +
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 621

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            T+N +++G CKN    +A R+   + L  L+    T+   + A  + G +     L   
Sbjct: 622 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 681

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
                + P   TY+++ + L +Q  L+E   L   M   G + D    N+I+R   +  D
Sbjct: 682 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 741

Query: 499 LRKA 502
           + +A
Sbjct: 742 ITRA 745



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 223/466 (47%), Gaps = 5/466 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL----YNLRHTDIMWDLYDDIKVSETPR 61
           Y  +G   +A+  + KM+   ++ ++ TY+SL+     N R T+    ++D +       
Sbjct: 281 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE-ARKIFDSMTKRGLEP 339

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T   ++ G   +  L +    L         P     N ++  Y K    + A  +F
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M ++GL+P+   Y  +I  LC +GS+++A+ +   M   G+ P+ I Y+ L  G    
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A ++I ++L +G   + + +  +I  +C+ G V E  KL ++M+  G K ++I Y
Sbjct: 460 DKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 519

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C +G++DEA  LL  M +VG+KPD+VTY  LI G C+  ++  A+ L+ EM S
Sbjct: 520 NTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 579

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +SPN   +  IL GL        A+  + S+  S    ++  YNI++ G  K     E
Sbjct: 580 SGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDE 639

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+++++ L    +     TFN +I    K G++ +A+ L      +GL P   TY+    
Sbjct: 640 ALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAE 699

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
              E+G+++ L  L   ME             +++ L ++  +  A
Sbjct: 700 NLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 185/379 (48%), Gaps = 5/379 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD--LYDDIKVSE 58
           +L   Y++   V  A+ V +KM++  L  ++  Y +++  L  +  + D  LY +  + E
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE 440

Query: 59  --TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
             TP N+   + +I GLC   +   A   + E   +    + +  N+I+  +CK G    
Sbjct: 441 GLTP-NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 499

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           ++ LF LM++ G+ PD  +YN LI G C+AG M+EA +    M   GV+PD +TY  L  
Sbjct: 500 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 559

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+  +S++  A  + ++++  G  P+I+TY +++ G           +L   +   G +L
Sbjct: 560 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 619

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +  Y+++L  +CK+   DEAL +   +    L+ +  T++I+I  L K  ++ +A  L+
Sbjct: 620 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLF 679

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
               +  + P+   +  +   L E+  + E    F S+  + C  D  + N ++   ++ 
Sbjct: 680 AAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQR 739

Query: 357 GNIGEAVQLYRQLIEKRIS 375
           G+I  A      + EK  S
Sbjct: 740 GDITRAGTYLFMIDEKHFS 758


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 164/644 (25%), Positives = 312/644 (48%), Gaps = 24/644 (3%)

Query: 27  LKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAI 83
           + +++ TY+ L+      R  D+   L+  I  +    +  T S ++  LC  +R ++A+
Sbjct: 153 VPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAV 212

Query: 84  LFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG--LHPDAFSYNIL 139
             L      E G  P+V S + I+   C    ++ A  LF +M K G    P+  +YN +
Sbjct: 213 NVLLHRM-SELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTV 271

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           IHG    G   +A    ++M R GV+PD +TY+++         +  A  V++++   G+
Sbjct: 272 IHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGA 331

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            PD VTY  +I GY  +G ++E  K+   M S+G   N++  +  L+S+CK GR  EA  
Sbjct: 332 QPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAE 391

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           +   M A G KPD+V+Y  L+ G   +      I L+N M S  I+ +      ++    
Sbjct: 392 IFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYA 451

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           ++ M+ +A + F  +       DVV Y+ +I  + ++G + +A++ + Q++ + I P+  
Sbjct: 452 KRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTA 511

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGL-EPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            ++S+I GFC +G +  A+ L+  +   G+  P  V + + +N+ C++G +     +   
Sbjct: 512 VYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDL 571

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           +      P  +T+T +I G C   K+ +A ++L+ M V+GV  D +TY+T++  + K   
Sbjct: 572 VTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGR 631

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           +     L  +M    ++P + TY I++ GL   G    A      + E   ++T   Y  
Sbjct: 632 INDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGI 691

Query: 559 II----KAHCAEG-----------DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           I+    + +CA+            +V  ++T    M+   +++  ++  K  F  + ++G
Sbjct: 692 ILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASG 751

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             P++    VM+I   + G +     + + M KSG++P   L+N
Sbjct: 752 LLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLN 795



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 149/591 (25%), Positives = 272/591 (46%), Gaps = 73/591 (12%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETA--GKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           NV++ SI++ GLC  S  Q A+   Q  A  G    P+VV+ N ++  + K G    A  
Sbjct: 227 NVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACS 286

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  M + G+ PD  +YN++I  LC A +M++A      M  +G +PD +TY+ +  G+ 
Sbjct: 287 LFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYA 346

Query: 180 LLSQISGAWKVIQKL-----------------------------------LIKGSDPDIV 204
            L ++  A K+ +K+                                     KG  PDIV
Sbjct: 347 TLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIV 406

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           +Y  L+ GY   G   + + L   M S G   +   +++L+ +  K G +D+A+ +  EM
Sbjct: 407 SYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEM 466

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC----- 319
           +  G+ PD+VTYS +I    +  ++  A++ +N+M ++ I PN+  + +I+ G C     
Sbjct: 467 QQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGL 526

Query: 320 --EKEMITE------AR---MYFDSLIMSNCIQ--------------------DVVLYNI 348
              KE+++E       R   ++F+S+I S C                      DV+ +  
Sbjct: 527 VKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTS 586

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDGY  +G + +A ++   +    +   IVT+++L+ G+ KNG++ D   L   ++  G
Sbjct: 587 LIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKG 646

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           ++P+ VTY   +      G          EM       T   Y +++ GLC+     EA+
Sbjct: 647 VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI 706

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            L + +  + V       NT+I +  K +   +A +L   +    L P  +TY ++I  L
Sbjct: 707 ILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINL 766

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
             +G +++A+ +  S+++  I         II+    +G++ KA  +  ++
Sbjct: 767 LKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV 817



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 221/470 (47%), Gaps = 4/470 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTN 66
           G   +A  +   M     K  I +Y +LL+         D   L++ +K +    +    
Sbjct: 384 GRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVF 443

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+I    ++  + DA+L   E   +   P VV+ + ++S + ++G    A   F  M+ 
Sbjct: 444 NILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVA 503

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV-EPDAITYSILAKGFHLLSQIS 185
            G+ P+   Y+ +I G C+ G + +A E  ++M   G+  PD + ++ +        ++ 
Sbjct: 504 RGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVM 563

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  +   +   G  PD++T+T LI GYC +G +++  K+ + M   G + +++ YS LL
Sbjct: 564 DAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLL 623

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
               K+GRI++ L L  EM+  G+KP+ VTY I++ GL +  +   A + ++EM     +
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
                +G IL GLC      EA + F  L   N    + + N MI+   K+    EA +L
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           +  +    + P+  T+  +I    K+G V DA  +  +++  G+ P +      +    E
Sbjct: 744 FATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLE 803

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           +G I +    L +++ K I     T ++++    ++ K  E ++LL   Y
Sbjct: 804 KGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLLPAKY 853



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 189/406 (46%), Gaps = 6/406 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y++ GMV DA+ +  +M++  +   + TY++++       R TD M      +  
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVAR 504

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG-PSVVSLNAIMSRYCKLGFAE 115
              P     +SI I G C    L  A   + E   K    P +V  N++++  CK G   
Sbjct: 505 GIQPNTAVYHSI-IQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVM 563

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            A  +F L+   G  PD  ++  LI G C+ G M++A +  + M   GVE D +TYS L 
Sbjct: 564 DAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLL 623

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            G+    +I+    + +++  KG  P+ VTY +++ G  + G      K    M+  G  
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           + V  Y ++L  +C++   DEA+ L  ++  + +K  +   + +I  + K  +  +A +L
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +  + +  + PN   +G +++ L +   + +A   F S+  S  +    L N +I   ++
Sbjct: 744 FATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLE 803

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
            G I +A     ++  KRI     T + ++  F + GK  +  +LL
Sbjct: 804 KGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLL 849


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 251/527 (47%), Gaps = 35/527 (6%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           K   P V      ++ +CK G  E A  LF  M + G+ P+  ++N +I GL + G  +E
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A  F   M   G+EP  ITYSIL KG     +I  A+ V++++  KG  P+++ Y  LI 
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG--- 268
            + + G++ + ++++++M+S+G  L    Y+ L+   CK+G+ D A  LL EM ++G   
Sbjct: 387 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 446

Query: 269 --------------------------------LKPDLVTYSILIRGLCKQDKVHKAIQLY 296
                                           + P     + LI GLCK  K  KA++L+
Sbjct: 447 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 506

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +  +K    ++    A+L GLCE   + EA      ++   C+ D V YN +I G    
Sbjct: 507 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 566

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             + EA     +++++ + P   T++ LI G     KV +A +  D  K +G+ P   TY
Sbjct: 567 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 626

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           +  ++  C+    +       EM +K + P  V Y  +I+  C+  +L  A++L EDM  
Sbjct: 627 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 686

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G++P+  TY ++I+       + +A  L  +M +  LEP    Y  LIDG    G +  
Sbjct: 687 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 746

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +CLL  +   N+   K+ YT +I  +  +G+V +A     +M EKG
Sbjct: 747 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG 793



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 265/539 (49%), Gaps = 40/539 (7%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETP 60
            + + G V +AV + +KM+E  +  ++ T+N+++  L    R+ +        ++    P
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
             + T SI++ GL +  R+ DA   L+E   K F P+V+  N ++  + + G    A  +
Sbjct: 342 -TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 400

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGS-------------------------------- 148
             LM+  GL   + +YN LI G C  G                                 
Sbjct: 401 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 460

Query: 149 ---MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
               + AL F  +M    + P     + L  G     + S A ++  + L KG   D  T
Sbjct: 461 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 520

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
              L+ G C+ G ++E  ++++ +L +G  ++ ++Y+ L+S  C   ++DEA   L EM 
Sbjct: 521 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 580

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             GLKPD  TYSILI GL   +KV +AIQ +++     + P+ + +  ++ G C+ E   
Sbjct: 581 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 640

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           E + +FD ++  N   + V+YN +I  Y + G +  A++L   +  K ISP+  T+ SLI
Sbjct: 641 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 700

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G     +V +A+ L + +++ GLEP+   YT  ++ Y + G + ++  LL+EM +K + 
Sbjct: 701 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 760

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
           P  +TYTV+I G  +   + EA +LL +M   G+ PD ITY   I  + K   + +AF+
Sbjct: 761 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 215/491 (43%), Gaps = 21/491 (4%)

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           AL+    +   G+ P   T +IL       ++     +    ++ KG  PD+  +T  I 
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 281

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
            +C+ G VEE +KL   M   G   NV+ ++ ++  +   GR DEA     +M   G++P
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
            L+TYSIL++GL +  ++  A  +  EM  K   PN   +  ++    E   + +A    
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 401

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           D ++          YN +I GY K G    A +L ++++    + +  +F S+I   C +
Sbjct: 402 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 461

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
                A R +  + L  + P     TT ++  C+ G   + L L  +   K       T 
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 521

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             ++ GLC+  KL EA ++ +++   G   D+++YNT+I   C  K L +AF  L++M  
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             L+P + TY+ILI GL     ++ A       + + +      Y+ +I   C       
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK------ 635

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
                 +  E+G E         FF  M+S    P+  +   ++ A+ + G L    EL 
Sbjct: 636 -----AERTEEGQE---------FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 681

Query: 632 AVMIKSGLLPD 642
             M   G+ P+
Sbjct: 682 EDMKHKGISPN 692



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 73/157 (46%), Gaps = 3/157 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPR 61
            Y R+G +  A+ +   MK   +  +  TY SL+  +     + +   L++++++     
Sbjct: 667 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 726

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV+  + +IDG  +  ++      L+E   K   P+ ++   ++  Y + G    A  L 
Sbjct: 727 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 786

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
             M + G+ PD+ +Y   I+G    G + EA + +++
Sbjct: 787 NEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 162/638 (25%), Positives = 305/638 (47%), Gaps = 24/638 (3%)

Query: 33  TYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN L+      R  D+   L+  I  +    +  T + ++  LC  +R ++A+  L   
Sbjct: 159 TYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHR 218

Query: 90  AGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG--LHPDAFSYNILIHGLCI 145
              E G  P+ VS + ++   C    ++ A  L  +M K G    PD  +Y+ +IHG   
Sbjct: 219 M-SELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFN 277

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
            G   +A    ++M R GV+PD +TY+++         +  A  V++++   G+ PD VT
Sbjct: 278 EGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVT 337

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y+ +I GY  +G ++E  K+   M  +G   N++  +  L+S+CK GR  EA      M 
Sbjct: 338 YSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMT 397

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
           A G KPD+ +Y  L+ G   +      I L+N M S  I+ N      ++    ++ M+ 
Sbjct: 398 AKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVD 457

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +A + F  +       DVV Y+ +I  + ++G + +A++ + Q++ + I P+   ++S+I
Sbjct: 458 DAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSII 517

Query: 386 YGFCKNGKVADARRLLDTIKLHGL-EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
            GFC +G +  A+ L+  +   G+  P  V +++ +N+ C++G +     +         
Sbjct: 518 QGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGE 577

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  +T+  +I G C   K+ +A ++L+ M V+GV PD +TYNT++  + K   +     
Sbjct: 578 RPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLT 637

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII---- 560
           L  +M    ++P + TY I++ GL   G    A      + E   ++T   Y  I+    
Sbjct: 638 LFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC 697

Query: 561 KAHCAEG-----------DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
           + +CA+            +V  ++T    M+   +++  ++  K  F  + ++G  P++ 
Sbjct: 698 RNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNES 757

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              VM+I   + G +     + + M KSG++P   L+N
Sbjct: 758 TYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLN 795



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 150/591 (25%), Positives = 268/591 (45%), Gaps = 73/591 (12%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETA--GKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           N  + SIV+  LC  S  Q A+  LQ  A  G    P VV+ + ++  +   G    A  
Sbjct: 227 NAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACS 286

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  M + G+ PD  +YN++I  LC A +M++A      M   G +PD +TYS +  G+ 
Sbjct: 287 LFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYA 346

Query: 180 LLSQISGAWKVIQKL-----------------------------------LIKGSDPDIV 204
            L ++  A K+ +++                                     KG  PDI 
Sbjct: 347 TLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIF 406

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           +Y  L+ GY   G   + + L   M S G   N   +++L+ +  K G +D+A+ +  EM
Sbjct: 407 SYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEM 466

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC----- 319
           +  G+ PD+VTYS +I    +  ++  A++ +N+M ++ I PN+  + +I+ G C     
Sbjct: 467 QQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGL 526

Query: 320 --EKEMITE------AR---MYFDSLIMSNC----IQD----------------VVLYNI 348
              KE+++E       R   ++F S+I S C    + D                V+ +N 
Sbjct: 527 VKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNS 586

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDGY  +G + +A ++   +    + P IVT+N+L+ G+ KNG++ D   L   ++  G
Sbjct: 587 LIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKG 646

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           ++P+ VTY   +      G          EM       T   Y +++ GLC+     EA+
Sbjct: 647 VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI 706

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            L + +  + V       NT+I +  K +   +A +L   +    L P  +TY ++I  L
Sbjct: 707 ILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINL 766

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
             +G +++A+ +  S+++  I         II+    +G++ KA  +  ++
Sbjct: 767 LKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV 817



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 198/415 (47%), Gaps = 39/415 (9%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG- 259
           P   TY +L+   C+    + GL L   +L  G K++ I  + LL  +C + R +EA+  
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLC----------------------------------- 284
           LL+ M  +G  P+ V+YSI+++ LC                                   
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 285 --KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
              + +  KA  L++EM  + + P+   +  I+  LC+   + +A +    +       D
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
            V Y+ MI GY  LG + EA +++R++ ++ + P+IVT NS +   CK+G+  +A    D
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFD 394

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
           ++   G +P   +Y T ++ Y  EG    ++ L   M++  I      +T++I    K+ 
Sbjct: 395 SMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRG 454

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            + +A+ +  +M   GV+PD +TY+T+I +F +   L  A +  NQM    ++P +A Y+
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYS 514

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA-YTTIIKAHCAEGDVHKAMTFF 576
            +I G C++G L  A  L+  +    I    +  ++++I + C +G V  A   F
Sbjct: 515 SIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIF 569



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 219/470 (46%), Gaps = 4/470 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTN 66
           G   +A      M     K  I +Y +LL+         D   L++ +K +    N +  
Sbjct: 384 GRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVF 443

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+I    ++  + DA+L   E   +   P VV+ + ++S + ++G    A   F  M+ 
Sbjct: 444 TILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVA 503

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV-EPDAITYSILAKGFHLLSQIS 185
            G+ P+   Y+ +I G C+ G + +A E  ++M   G+  PD + +S +        ++ 
Sbjct: 504 RGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVM 563

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  +       G  P ++T+  LI GYC +G +++  K+ + M   G + +++ Y+ LL
Sbjct: 564 DAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLL 623

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
               K+GRI++ L L  EM+  G+KP+ VTY I++ GL +  +   A + ++EM     +
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
                +G IL GLC      EA + F  L   N    + + N MI+   K+    EA +L
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           +  +    + P+  T+  +I    K+G V DA  +  +++  G+ P +      +    E
Sbjct: 744 FATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLE 803

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           +G I +    L +++ K I     T ++++    ++ K QE ++LL   Y
Sbjct: 804 KGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLLPAKY 853



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 189/406 (46%), Gaps = 6/406 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y++ GMV DA+ +  +M++  +   + TY++++       R TD M      +  
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVAR 504

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG-PSVVSLNAIMSRYCKLGFAE 115
              P N    S +I G C    L  A   + E   K    P +V  +++++  CK G   
Sbjct: 505 GIQP-NTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVM 563

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            A  +F L    G  P   ++N LI G C+ G M++A +  + M   GVEPD +TY+ L 
Sbjct: 564 DAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLL 623

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            G+    +I+    + +++  KG  P+ VTY +++ G  + G      K    M+  G  
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           + V  Y ++L  +C++   DEA+ L  ++  + +K  +   + +I  + K  +  +A +L
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +  + +  + PN   +G +++ L +   + +A   F S+  S  +    L N +I   ++
Sbjct: 744 FATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLE 803

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
            G I +A     ++  KRI     T + ++  F + GK  +  +LL
Sbjct: 804 KGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           +E  T+   PT  TY +++   C+  +    + L   +   G+  DQIT NT+++  C  
Sbjct: 146 EEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYA 205

Query: 497 KDLRKAFQ-LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL--VSLQEHNISLTK 553
               +A   LL++M      P + +Y+I++  LC N   + A  LL  ++ Q    S   
Sbjct: 206 NRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDV 265

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------------TKSFFCM 598
           VAY+T+I     EG+  KA + F +M  +G +  +  Y                +     
Sbjct: 266 VAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQ 325

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           M ++G  PD      M+  +   G L    ++   M K GL+P+
Sbjct: 326 MTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPN 369


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 154/569 (27%), Positives = 277/569 (48%), Gaps = 2/569 (0%)

Query: 35  NSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEF 94
           N LL   R  D  + L+D +       +V T + +I  L +   +  A + L        
Sbjct: 210 NGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGA 269

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
            P+ ++ N+++  YC  G    A G+F  M + G+ PD F+YN L+  LC  G   EA +
Sbjct: 270 MPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARK 329

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
             + M + G +P++ TY  L  G+     +     ++  ++  G  PD   + +LI  Y 
Sbjct: 330 IFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYT 389

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           + G V++ + L   M  QG   + + Y +++ ++C  G++D+A+     + + GL PD V
Sbjct: 390 KHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAV 449

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
            +  LI GLC +DK  KA +L  EM  + I PN+     +L  LC++ M+  A+  FD +
Sbjct: 450 VFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLM 509

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           +  +  +DV+ YN +IDGY   G + EA +L   ++   + P+ VT+N++I G+CKNG++
Sbjct: 510 VRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRI 569

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            DA  L   +   G+ P  VTY+T +    +         L   M    I     TY ++
Sbjct: 570 EDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNII 629

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           + GLC+     +A+++ +++Y+I    +  T+N +I +  K     +A  L   +    L
Sbjct: 630 LLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGL 689

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P   TY +++  L   G L+  D L +SL+++  +        ++     +G+V KA  
Sbjct: 690 VPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGV 749

Query: 575 FFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           +  ++ E  F  S+   T     +++S+G
Sbjct: 750 YLSKIDENNF--SLEASTAESLVLLVSSG 776



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 152/607 (25%), Positives = 277/607 (45%), Gaps = 22/607 (3%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC-KLGFAEV 116
           + P N+ T S+VID   +   L  A   L       +    ++ + ++   C K   +E 
Sbjct: 86  KVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEA 145

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-----GRHGVEPDAITY 171
                  M   G  P+ FSY IL+ GLC     ++AL   + M      R G  PD ++Y
Sbjct: 146 MDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSY 205

Query: 172 SILAKG-FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           + +  G      Q+  A+ +  ++L +G  PD+VTY  +I    +   +++   +   M+
Sbjct: 206 NTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMV 265

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
             G   N I ++ LL   C SG+ ++A+G+   M   G++PD+ TY+ L+  LCK  +  
Sbjct: 266 KNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSM 325

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A ++++ M  +   PNS  +G +L G   +  + +     D ++ +    D  ++NI+I
Sbjct: 326 EARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILI 385

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
             Y K G + +A+ L+ ++  + ++P  VT+  ++   C  GKV DA      +   GL 
Sbjct: 386 GTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLT 445

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P AV +   ++  C      +   L  EM  + I P ++ +  ++  LCK+  +  A  +
Sbjct: 446 PDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNI 505

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
            + M  + V  D ITYNT+I  +C    + +A +LL  M L  ++P   TYN +I+G C 
Sbjct: 506 FDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCK 565

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
           NG +++A  L   +    ++   V Y+TI++          A   +  M++ G +  I  
Sbjct: 566 NGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGT 625

Query: 591 YTKSFFCMMLSN---------------GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
           Y      +  +N                F  +     +M+ A  +GG      +L A ++
Sbjct: 626 YNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLL 685

Query: 636 KSGLLPD 642
             GL+P+
Sbjct: 686 ARGLVPN 692



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/505 (23%), Positives = 235/505 (46%), Gaps = 22/505 (4%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           + R  V P+ ITYS++      +  +  A+  + +++  G   + +T++ L+   C    
Sbjct: 82  VARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKR 141

Query: 219 VEEGLKLR-EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV-----GLKPD 272
             E + +    M   G   NV +Y++LL  +C   R  +AL LL+ M        G  PD
Sbjct: 142 TSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPD 201

Query: 273 LVTYSILIRGLCKQDK-VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           +V+Y+ +I GL ++ + +  A  L+++M  + +SP+   + +I+  L +   + +A +  
Sbjct: 202 VVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVL 261

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             ++ +  + + + +N ++ GY   G   +A+ +++++    + P + T+N+L+   CKN
Sbjct: 262 VRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKN 321

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G+  +AR++ D++   G +P++ TY T ++ Y  EG++ ++  LL  M    I P H  +
Sbjct: 322 GRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIF 381

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            ++I    K  K+ +A+ L   M   G+ PD +TY  ++ + C    +  A     ++  
Sbjct: 382 NILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLIS 441

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             L P +  +  LI GLC       A+ L V +    I    + + T++   C EG V +
Sbjct: 442 EGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVAR 501

Query: 572 AMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEVMLI 616
           A   F  MV    +  +  Y      +C+             M+ +G  P++     M+ 
Sbjct: 502 AKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMIN 561

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLP 641
            + + G +   F L   M   G+ P
Sbjct: 562 GYCKNGRIEDAFSLFRQMASKGVNP 586



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/466 (24%), Positives = 214/466 (45%), Gaps = 5/466 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL----YNLRHTDIMWDLYDDIKVSETPR 61
           Y  +G  +DA+ V  +M    ++  + TYN+L+     N R  +        +K    P 
Sbjct: 283 YCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKP- 341

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T   ++ G   +  L      L         P     N ++  Y K G  + A  LF
Sbjct: 342 NSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLF 401

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + GL+PD  +Y I++  LC+ G +++A+     +   G+ PDA+ +  L  G    
Sbjct: 402 SKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCAR 461

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A ++  +++ +G  P+ + +  L+   C+ G V     + ++M+    + +VI Y
Sbjct: 462 DKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITY 521

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C  G++DEA  LL  M   G+KP+ VTY+ +I G CK  ++  A  L+ +M S
Sbjct: 522 NTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMAS 581

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K ++P    +  IL GL +      A+  +  +I S    D+  YNI++ G  +     +
Sbjct: 582 KGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDD 641

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+++++ L          TFN +I    K G+  +A+ L  ++   GL P+ VTY   M 
Sbjct: 642 ALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMK 701

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           +  E+G ++ L  L   +E             ++  L ++ ++++A
Sbjct: 702 SLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKA 747



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 191/418 (45%), Gaps = 27/418 (6%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL- 295
           N+I YSV++    + G +D A   L  +   G   + +T+S L++ LC + +  +A+ + 
Sbjct: 90  NLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIA 149

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-----DVVLYNIMI 350
              M     +PN F++  +L GLC++    +A     ++++++  +     DVV YN +I
Sbjct: 150 LRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVI 209

Query: 351 DGYVKLGN-IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           +G ++ G  +  A  L+ Q++++ +SP +VT+NS+I    K   +  A  +L  +  +G 
Sbjct: 210 NGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGA 269

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P+ +T+ + ++ YC  G     + + + M    + P   TY  ++  LCK  +  EA +
Sbjct: 270 MPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARK 329

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           + + M   G  P+  TY T++  +     L K   LL+ M  + ++P    +NILI    
Sbjct: 330 IFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYT 389

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            +G + +A  L   ++   ++   V Y  ++ A C  G V  AM  F +++         
Sbjct: 390 KHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLI--------- 440

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                      S G  PD  +   ++             ELA  MI  G+ P+    N
Sbjct: 441 -----------SEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFN 487



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 185/389 (47%), Gaps = 5/389 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y++ G V DA+ + +KM+   L     TY  ++  L    +  D M      I  
Sbjct: 383 ILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISE 442

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
             TP  V   ++ I GLC + +   A     E  G+   P+ +  N +++  CK G    
Sbjct: 443 GLTPDAVVFRNL-IHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVAR 501

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           AK +F LM++  +  D  +YN LI G C+ G ++EA +    M   GV+P+ +TY+ +  
Sbjct: 502 AKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMIN 561

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+    +I  A+ + +++  KG +P IVTY+ ++ G  Q        +L   M+  G K 
Sbjct: 562 GYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKF 621

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           ++  Y+++L  +C++   D+AL +   +  +    +  T++I+I  L K  +  +A  L+
Sbjct: 622 DIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLF 681

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             + ++ + PN   +  ++  L E+ ++ E    F SL  + C  +  + N ++   ++ 
Sbjct: 682 ASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQK 741

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           G + +A     ++ E   S    T  SL+
Sbjct: 742 GEVRKAGVYLSKIDENNFSLEASTAESLV 770


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 157/543 (28%), Positives = 267/543 (49%), Gaps = 35/543 (6%)

Query: 85  FLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
           FL E +G  FG S+ S N ++ +  K    E A+ L+  ML  G+ P   ++N LI+ L 
Sbjct: 150 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 209

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
             G + EA    + + ++ + PD  TY+ L  G      +  A+ V  +++ +G DP+ V
Sbjct: 210 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TY+ LI G C  G V+E L + E M+ +G +  V  Y++ ++++C     +EA+ L+  M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA----------- 313
           +  G +P++ TY+ LI GL +  K+  AI LY++M  + + PN+  + A           
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 314 ------------------------ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
                                   I+ GLC    I +A + F+ ++    +  VV YN +
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           I+GY+  GN+  A +L   + E    P   T+N L+ GF K GK+  A      +   GL
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P+ V+YT  ++ + ++G +   L+LL+ ME     P   +Y  VI GL K+ +  EA +
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           + + M   G+ P+ ITY T+I   C+    + AF++ + M      P   TY+ LI GLC
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             G    A+ LL  ++   ++  +V +T++I      G +  A     +MV+ G + + R
Sbjct: 630 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYR 689

Query: 590 DYT 592
            Y+
Sbjct: 690 TYS 692



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 155/519 (29%), Positives = 257/519 (49%), Gaps = 39/519 (7%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
           + S+ G V +A  +++++ + DL   + TY SL+      R+ D+ + ++D +       
Sbjct: 207 ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDP 266

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLN------------------- 102
           N  T S +I+GLC + R+ +A+  L+E   K   P+V +                     
Sbjct: 267 NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 326

Query: 103 ----------------AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
                           A++S   +LG  EVA GL+  MLK GL P+  +YN LI+ LC+ 
Sbjct: 327 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVG 386

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G    AL+  + M  HG   +  TY+ + KG  L   I  A  + +K+L  G  P +VTY
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 446

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             LI GY   GNV    +L ++M   G + +   Y+ L+S   K G+++ A     EM  
Sbjct: 447 NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE 506

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            GL P+ V+Y+ LI G  K  KV  A+ L   M     +PN  ++ A++ GL ++   +E
Sbjct: 507 CGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSE 566

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A    D ++    + +V+ Y  +IDG  + G    A +++  + +++  P++ T++SLIY
Sbjct: 567 AEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 626

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G C+ GK  +A  LL  ++  GL P  VT+T+ ++ +   G I     LL+ M      P
Sbjct: 627 GLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKP 686

Query: 447 THVTYTVVIKGLCKQ-WKLQEAVQLLEDMYVIGVTPDQI 484
            + TY+V++KGL K+   L+E +  L D Y +G  P Q+
Sbjct: 687 NYRTYSVLLKGLQKECLLLEEKIFPLVDNYFLGCNPLQL 725



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 267/537 (49%), Gaps = 38/537 (7%)

Query: 30  SIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           S+ + N+LL  L   +++    +LY  +  S    ++ T + +I+ L ++ ++++A L L
Sbjct: 162 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELIL 221

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            +    +  P V +  +++  +C+    ++A G+F  M+K G  P++ +Y+ LI+GLC  
Sbjct: 222 SQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNE 281

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G ++EAL+   +M   G+EP   TY++       +     A +++ ++  +G  P++ TY
Sbjct: 282 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTY 341

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T LI G  ++G +E  + L   ML +G   N + Y+ L++ +C  GR   AL + + ME 
Sbjct: 342 TALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG 401

Query: 267 -----------------------------------VGLKPDLVTYSILIRGLCKQDKVHK 291
                                              +G  P +VTY+ LI G   +  V+ 
Sbjct: 402 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNN 461

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A +L + M      P+ + +  ++ G  +   +  A  YF  ++      + V Y  +ID
Sbjct: 462 AARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALID 521

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G+ K G +  A+ L +++ E   +P++ ++N++I G  K  + ++A ++ D +   GL P
Sbjct: 522 GHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLP 581

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + +TYTT ++  C  G  Q    +  +ME +   P   TY+ +I GLC++ K  EA  LL
Sbjct: 582 NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILL 641

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           ++M   G+ PD++T+ ++I  F     +  AF LL +M     +P   TY++L+ GL
Sbjct: 642 KEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGL 698



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 192/397 (48%)

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           VE    L + ML+ G + +++ ++ L++ + K G++ EA  +L ++    L PD+ TY+ 
Sbjct: 179 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 238

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           LI G C+   +  A  +++ M  +   PNS  +  ++ GLC +  + EA    + +I   
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 298

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
               V  Y + I     + +  EA++L  ++ ++   P++ T+ +LI G  + GK+  A 
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 358

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            L   +   GL P+ VTY   +N  C  G     L +   ME         TY  +IKGL
Sbjct: 359 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 418

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           C    +++A+ L E M  +G  P  +TYNT+I  +    ++  A +LL+ M  +  EP  
Sbjct: 419 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 478

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TYN L+ G    G L++A      + E  ++   V+YT +I  H  +G V  A++   +
Sbjct: 479 WTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKR 538

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
           M E G   ++  Y      +   N F   ++IC+ M+
Sbjct: 539 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV 575



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 193/425 (45%), Gaps = 15/425 (3%)

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           GF  ++ + + LL  + K   ++ A  L  +M   G++P L+T++ LI  L K+ KV +A
Sbjct: 158 GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREA 217

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
             + +++    +SP+ F + +++LG C    +  A   FD ++   C  + V Y+ +I+G
Sbjct: 218 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLING 277

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
               G + EA+ +  ++IEK I P++ T+   I   C      +A  L+  +K  G  P+
Sbjct: 278 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 337

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             TYT  ++     G ++  + L  +M  + + P  VTY  +I  LC   +   A+++  
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 397

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            M   G   +  TYN II+  C   D+ KA  L  +M      PT  TYN LI+G    G
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 457

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           ++ NA  LL  ++E+     +  Y  ++      G +  A  +F +MVE G   +   YT
Sbjct: 458 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 517

Query: 593 K---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
                           S    M   G  P+ E    ++    +        ++   M++ 
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577

Query: 638 GLLPD 642
           GLLP+
Sbjct: 578 GLLPN 582



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 177/380 (46%), Gaps = 15/380 (3%)

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           ++I+    ++++ +     NE+       + ++   +L+ L + EM+  AR  +  ++ S
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
                ++ +N +I+   K G + EA  +  Q+ +  +SP + T+ SLI G C+N  +  A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             + D +   G +P++VTY+T +N  C EG +   L +L+EM  K I PT  TYT+ I  
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LC     +EA++L+  M   G  P+  TY  +I    +   L  A  L ++M    L P 
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
           + TYN LI+ LCV G    A  +   ++ H        Y  IIK  C  GD+ KAM  F 
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 578 QMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           +M++ G   ++  Y                     +M  NG  PD+     ++  F + G
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492

Query: 623 DLGSVFELAAVMIKSGLLPD 642
            L S       M++ GL P+
Sbjct: 493 KLESASFYFQEMVECGLNPN 512



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 128/294 (43%), Gaps = 27/294 (9%)

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN----GKVADARRLLDTIKLHGLEPSA 413
           N+   + +  +L+  R+         L+   C+N     +VAD    L+ I   G   S 
Sbjct: 107 NMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVAD---FLNEISGMGFGFSL 163

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            +  T +    +   ++    L ++M    I P+ +T+  +I  L K+ K++EA  +L  
Sbjct: 164 YSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQ 223

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           ++   ++PD  TY ++I   C+ ++L  AF + ++M     +P S TY+ LI+GLC  G 
Sbjct: 224 IFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGR 283

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           +  A  +L  + E  I  T   YT  I A CA     +A+    +M ++G   +++ YT 
Sbjct: 284 VDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT- 342

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                               ++    + G L     L   M+K GL+P+    N
Sbjct: 343 -------------------ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYN 377


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 251/527 (47%), Gaps = 35/527 (6%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           K   P V      ++ +CK G  E A  LF  M + G+ P+  ++N +I GL + G  +E
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A  F   M   G+EP  ITYSIL KG     +I  A+ V++++  KG  P+++ Y  LI 
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG--- 268
            + + G++ + ++++++M+S+G  L    Y+ L+   CK+G+ D A  LL EM ++G   
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433

Query: 269 --------------------------------LKPDLVTYSILIRGLCKQDKVHKAIQLY 296
                                           + P     + LI GLCK  K  KA++L+
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +  +K    ++    A+L GLCE   + EA      ++   C+ D V YN +I G    
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             + EA     +++++ + P   T++ LI G     KV +A +  D  K +G+ P   TY
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           +  ++  C+    +       EM +K + P  V Y  +I+  C+  +L  A++L EDM  
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G++P+  TY ++I+       + +A  L  +M +  LEP    Y  LIDG    G +  
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +CLL  +   N+   K+ YT +I  +  +G+V +A     +M EKG
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG 780



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 265/539 (49%), Gaps = 40/539 (7%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETP 60
            + + G V +AV + +KM+E  +  ++ T+N+++  L    R+ +        ++    P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
             + T SI++ GL +  R+ DA   L+E   K F P+V+  N ++  + + G    A  +
Sbjct: 329 -TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGS-------------------------------- 148
             LM+  GL   + +YN LI G C  G                                 
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447

Query: 149 ---MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
               + AL F  +M    + P     + L  G     + S A ++  + L KG   D  T
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
              L+ G C+ G ++E  ++++ +L +G  ++ ++Y+ L+S  C   ++DEA   L EM 
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             GLKPD  TYSILI GL   +KV +AIQ +++     + P+ + +  ++ G C+ E   
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           E + +FD ++  N   + V+YN +I  Y + G +  A++L   +  K ISP+  T+ SLI
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G     +V +A+ L + +++ GLEP+   YT  ++ Y + G + ++  LL+EM +K + 
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
           P  +TYTV+I G  +   + EA +LL +M   G+ PD ITY   I  + K   + +AF+
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 215/491 (43%), Gaps = 21/491 (4%)

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           AL+    +   G+ P   T +IL       ++     +    ++ KG  PD+  +T  I 
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 268

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
            +C+ G VEE +KL   M   G   NV+ ++ ++  +   GR DEA     +M   G++P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
            L+TYSIL++GL +  ++  A  +  EM  K   PN   +  ++    E   + +A    
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           D ++          YN +I GY K G    A +L ++++    + +  +F S+I   C +
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
                A R +  + L  + P     TT ++  C+ G   + L L  +   K       T 
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             ++ GLC+  KL EA ++ +++   G   D+++YNT+I   C  K L +AF  L++M  
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             L+P + TY+ILI GL     ++ A       + + +      Y+ +I   C       
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK------ 622

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
                 +  E+G E         FF  M+S    P+  +   ++ A+ + G L    EL 
Sbjct: 623 -----AERTEEGQE---------FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668

Query: 632 AVMIKSGLLPD 642
             M   G+ P+
Sbjct: 669 EDMKHKGISPN 679



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 73/157 (46%), Gaps = 3/157 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPR 61
            Y R+G +  A+ +   MK   +  +  TY SL+  +     + +   L++++++     
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV+  + +IDG  +  ++      L+E   K   P+ ++   ++  Y + G    A  L 
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
             M + G+ PD+ +Y   I+G    G + EA + +++
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 251/527 (47%), Gaps = 35/527 (6%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           K   P V      ++ +CK G  E A  LF  M + G+ P+  ++N +I GL + G  +E
Sbjct: 243 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 302

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A  F   M   G+EP  ITYSIL KG     +I  A+ V++++  KG  P+++ Y  LI 
Sbjct: 303 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 362

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG--- 268
            + + G++ + ++++++M+S+G  L    Y+ L+   CK+G+ D A  LL EM ++G   
Sbjct: 363 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 422

Query: 269 --------------------------------LKPDLVTYSILIRGLCKQDKVHKAIQLY 296
                                           + P     + LI GLCK  K  KA++L+
Sbjct: 423 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 482

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +  +K    ++    A+L GLCE   + EA      ++   C+ D V YN +I G    
Sbjct: 483 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 542

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             + EA     +++++ + P   T++ LI G     KV +A +  D  K +G+ P   TY
Sbjct: 543 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 602

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           +  ++  C+    +       EM +K + P  V Y  +I+  C+  +L  A++L EDM  
Sbjct: 603 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 662

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G++P+  TY ++I+       + +A  L  +M +  LEP    Y  LIDG    G +  
Sbjct: 663 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 722

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +CLL  +   N+   K+ YT +I  +  +G+V +A     +M EKG
Sbjct: 723 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG 769



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 265/539 (49%), Gaps = 40/539 (7%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETP 60
            + + G V +AV + +KM+E  +  ++ T+N+++  L    R+ +        ++    P
Sbjct: 258 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 317

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
             + T SI++ GL +  R+ DA   L+E   K F P+V+  N ++  + + G    A  +
Sbjct: 318 -TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 376

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGS-------------------------------- 148
             LM+  GL   + +YN LI G C  G                                 
Sbjct: 377 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 436

Query: 149 ---MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
               + AL F  +M    + P     + L  G     + S A ++  + L KG   D  T
Sbjct: 437 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 496

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
              L+ G C+ G ++E  ++++ +L +G  ++ ++Y+ L+S  C   ++DEA   L EM 
Sbjct: 497 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 556

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             GLKPD  TYSILI GL   +KV +AIQ +++     + P+ + +  ++ G C+ E   
Sbjct: 557 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 616

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           E + +FD ++  N   + V+YN +I  Y + G +  A++L   +  K ISP+  T+ SLI
Sbjct: 617 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 676

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G     +V +A+ L + +++ GLEP+   YT  ++ Y + G + ++  LL+EM +K + 
Sbjct: 677 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 736

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
           P  +TYTV+I G  +   + EA +LL +M   G+ PD ITY   I  + K   + +AF+
Sbjct: 737 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 795



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 215/491 (43%), Gaps = 21/491 (4%)

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           AL+    +   G+ P   T +IL       ++     +    ++ KG  PD+  +T  I 
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 257

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
            +C+ G VEE +KL   M   G   NV+ ++ ++  +   GR DEA     +M   G++P
Sbjct: 258 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 317

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
            L+TYSIL++GL +  ++  A  +  EM  K   PN   +  ++    E   + +A    
Sbjct: 318 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 377

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           D ++          YN +I GY K G    A +L ++++    + +  +F S+I   C +
Sbjct: 378 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 437

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
                A R +  + L  + P     TT ++  C+ G   + L L  +   K       T 
Sbjct: 438 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 497

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             ++ GLC+  KL EA ++ +++   G   D+++YNT+I   C  K L +AF  L++M  
Sbjct: 498 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 557

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             L+P + TY+ILI GL     ++ A       + + +      Y+ +I   C       
Sbjct: 558 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK------ 611

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
                 +  E+G E         FF  M+S    P+  +   ++ A+ + G L    EL 
Sbjct: 612 -----AERTEEGQE---------FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 657

Query: 632 AVMIKSGLLPD 642
             M   G+ P+
Sbjct: 658 EDMKHKGISPN 668



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 73/157 (46%), Gaps = 3/157 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPR 61
            Y R+G +  A+ +   MK   +  +  TY SL+  +     + +   L++++++     
Sbjct: 643 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 702

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV+  + +IDG  +  ++      L+E   K   P+ ++   ++  Y + G    A  L 
Sbjct: 703 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 762

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
             M + G+ PD+ +Y   I+G    G + EA + +++
Sbjct: 763 NEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 799


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 151/503 (30%), Positives = 252/503 (50%), Gaps = 6/503 (1%)

Query: 31  IQTYNSLLYNLR---HTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           I+  N +L  LR     D M  +Y ++       ++ T + ++D   ++ R+  A   L+
Sbjct: 196 IKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLR 255

Query: 88  ETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
           E   +  G  PS V+ N +++   + G  E A  L   M +      AF++N LI G   
Sbjct: 256 EMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFA 314

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
            GS+E+A     +M   G+ P  +TY+ +  G      +  A     ++   G  PD++T
Sbjct: 315 RGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLIT 374

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y  LI GYC+ GN++E L L   +   G   +V+ Y++LL   C+ G ++EA     EM 
Sbjct: 375 YNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMV 434

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G +PD+ TY+IL+ G  K   +    + ++EM SK + P+ FA+   +         +
Sbjct: 435 EQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTS 494

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA    + +I      D V YNI +DG  K GN+ +A  L+ +++   + P  +T+  LI
Sbjct: 495 EAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLI 554

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
           +  C+ G++ +AR + D + + GL PSAVTYT F++AYC  GN+       Q+M  + + 
Sbjct: 555 HAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVR 614

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  VTY V+I  LC+  +   A Q   +M   G++P++ TY  +I   CK  +  +A +L
Sbjct: 615 PNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRL 674

Query: 506 LNQMWLHNLEPTSATYNILIDGL 528
            ++M  H + P   T+N L  G 
Sbjct: 675 YSEMHQHGIHPDHCTHNALFKGF 697



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 247/516 (47%), Gaps = 4/516 (0%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           ++V+  L  ++R  D      E       PS+V+ N ++  + + G  + A  L   M  
Sbjct: 200 NLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEA 259

Query: 127 Y--GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G  P   +YN++I+GL   G +E+A +  + M R   +  A T++ L  G+     +
Sbjct: 260 RPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSV 318

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +  ++  +G  P +VTY  +I G  + GNVE        M + G   ++I Y+ L
Sbjct: 319 EKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSL 378

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++  CK+G + EAL L  +++  GL P ++TY+IL+ G C+   + +A +   EM  +  
Sbjct: 379 INGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGC 438

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+   +  ++ G  +   +   R +FD ++      D   YN  I   + LG+  EA Q
Sbjct: 439 QPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQ 498

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L   +I + IS   VT+N  + G CK+G + DA  L   +   GL+P  +TYT  ++A+C
Sbjct: 499 LTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHC 558

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           E G ++    +   M    + P+ VTYTV I   C++  L  A    + M   GV P+++
Sbjct: 559 ERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEV 618

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TYN +I + C+      A+Q  ++M    L P   TY +LIDG C  G+ + A  L   +
Sbjct: 619 TYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEM 678

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
            +H I      +  + K    EG    A+ +   +V
Sbjct: 679 HQHGIHPDHCTHNALFKGF-DEGQSKHAIQYMENVV 713



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 234/468 (50%), Gaps = 3/468 (0%)

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH--GVEPDAITYSILA 175
           + ++  ML+ G+ P   +YN L+      G +++A +   +M     G  P  +TY+++ 
Sbjct: 216 RSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVI 275

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            G     ++  A +++ ++ +        T+  LI GY   G+VE+   L+  M ++G  
Sbjct: 276 NGLARKGELEKAAQLVDRMRMS-KKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIV 334

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
             V+ Y+ ++  M +SG ++ A     EM A+GL PDL+TY+ LI G CK   + +A+ L
Sbjct: 335 PTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWL 394

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           + ++    ++P+   +  +L G C    + EAR +   ++   C  DV  Y I+++G  K
Sbjct: 395 FGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRK 454

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           + N+    + + +++ K + P    +N+ I      G  ++A +L + +   G+    VT
Sbjct: 455 VRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVT 514

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y  F++  C+ GN++    L  +M +  + P  +TYT +I   C++ +L+EA  + + M 
Sbjct: 515 YNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGML 574

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
           V G+ P  +TY   I ++C+  +L  A+    +M    + P   TYN+LI  LC  G   
Sbjct: 575 VSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTN 634

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            A      + E  +S  K  YT +I  +C EG+  +A+  + +M + G
Sbjct: 635 LAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHG 682



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 251/506 (49%), Gaps = 43/506 (8%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSET---PRNVYTNS 67
           D   V A+M +L ++ SI TYN+LL   +     D    L  +++       P +V T +
Sbjct: 214 DMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDV-TYN 272

Query: 68  IVIDGLCQQSRLQDAILFLQ--------------------------ETAG--------KE 93
           +VI+GL ++  L+ A   +                           E AG        + 
Sbjct: 273 VVINGLARKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEG 332

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
             P+VV+ N I+    + G  E A+  F  M   GL PD  +YN LI+G C AG+++EAL
Sbjct: 333 IVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEAL 392

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
               D+ R G+ P  +TY+IL  G+  L  +  A +  Q+++ +G  PD+ TYT+L+ G 
Sbjct: 393 WLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGS 452

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
            ++ N+    +  + MLS+G + +  AY+  +S+    G   EA  L   M + G+  D 
Sbjct: 453 RKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDT 512

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VTY+I + GLCK   +  A  L+ +M S  + P+   +  ++   CE+  + EAR  FD 
Sbjct: 513 VTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDG 572

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +++S      V Y + I  Y + GN+  A   +++++E+ + P+ VT+N LI+  C+ G+
Sbjct: 573 MLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGR 632

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
              A +    +   GL P+  TYT  ++  C+EGN +  + L  EM    I P H T+  
Sbjct: 633 TNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNA 692

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGV 479
           + KG   + + + A+Q +E++ V+G 
Sbjct: 693 LFKGF-DEGQSKHAIQYMENV-VLGA 716



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 231/474 (48%), Gaps = 3/474 (0%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M  +G+ P     N+++  L      ++      +M + G+EP  +TY+ L   F  
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 181 LSQISGAWKVIQKLLIK--GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             ++  A K+++++  +  G  P  VTY V+I G  + G +E+  +L + M     K + 
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASA 302

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             ++ L++     G +++A  L  EME  G+ P +VTY+ +I G+ +   V  A   + E
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M +  + P+   + +++ G C+   + EA   F  L  +     V+ YNI++DGY +LG+
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGD 422

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EA +  ++++E+   P + T+  L+ G  K   +A  R   D +   GL+P    Y T
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNT 482

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++A    G+      L + M ++ I    VTY + + GLCK   L++A  L   M   G
Sbjct: 483 RISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDG 542

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           + PD ITY  +I + C+   LR+A  + + M +  L P++ TY + I   C  G+L +A 
Sbjct: 543 LQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAY 602

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
                + E  +   +V Y  +I A C  G  + A   F +M+E+G   +   YT
Sbjct: 603 GWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYT 656



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 206/422 (48%), Gaps = 25/422 (5%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV--GLKPDLVTYSILIRGLCKQ 286
           ML  G + +++ Y+ LL S  + GR+D+A  LL EMEA   G  P  VTY+++I GL ++
Sbjct: 222 MLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARK 281

Query: 287 DKVHKAIQLYNEM-CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
            ++ KA QL + M  SK+ S  +F    ++ G   +  + +A      +     +  VV 
Sbjct: 282 GELEKAAQLVDRMRMSKKAS--AFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVT 339

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN +I G  + GN+  A   + ++    + P ++T+NSLI G+CK G + +A  L   +K
Sbjct: 340 YNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLK 399

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             GL PS +TY   ++ YC  G+++      QEM  +   P   TYT+++ G  K   L 
Sbjct: 400 RAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLA 459

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
              +  ++M   G+ PD   YNT I +        +AFQL   M    +   + TYNI +
Sbjct: 460 MVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFL 519

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           DGLC +G+LK+A  L + +    +    + YT +I AHC  G + +A             
Sbjct: 520 DGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREA------------- 566

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                  +  F  ML +G PP      V + A+ + G+L S +     M++ G+ P++  
Sbjct: 567 -------RDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVT 619

Query: 646 IN 647
            N
Sbjct: 620 YN 621



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 184/387 (47%), Gaps = 44/387 (11%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY------NLRHTDIMWDLYDDIKVSETPR 61
           R+G V  A     +M+ + L   + TYNSL+       NL+  + +W L+ D+K +    
Sbjct: 349 RSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLK--EALW-LFGDLKRAGLAP 405

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T +I++DG C+   L++A  F QE   +   P V +   +M+   K+    + +  F
Sbjct: 406 SVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFF 465

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  GL PD F+YN  I    I GS  EA + T  M   G+  D +TY+I   G    
Sbjct: 466 DEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKS 525

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A+ +  K++  G  PD +TYT LI  +C+ G + E   + + ML  G   + + Y
Sbjct: 526 GNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTY 585

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +V + + C+ G +  A G   +M   G++P+ VTY++LI  LC+  + + A Q ++EM  
Sbjct: 586 TVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLE 645

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + +SPN +                                    Y ++IDG  K GN  E
Sbjct: 646 RGLSPNKYT-----------------------------------YTLLIDGNCKEGNWEE 670

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGF 388
           A++LY ++ +  I P   T N+L  GF
Sbjct: 671 AIRLYSEMHQHGIHPDHCTHNALFKGF 697



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 144/333 (43%), Gaps = 51/333 (15%)

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           +R++    + P I   N ++       +  D R +   +   G+EPS VTY T ++++  
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 426 EGNIQRLLALLQEMETKAIG--PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI------ 477
           EG + +   LL+EME +  G  P+ VTY VVI GL ++ +L++A QL++ M +       
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAF 303

Query: 478 ----------------------------GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
                                       G+ P  +TYNTII    +  ++  A     +M
Sbjct: 304 TFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEM 363

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               L P   TYN LI+G C  G+LK A  L   L+   ++ + + Y  ++  +C  GD+
Sbjct: 364 RAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDL 423

Query: 570 HKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVM 614
            +A  F  +MVE+G +  +  YT               + FF  MLS G  PD       
Sbjct: 424 EEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTR 483

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           + A    G     F+L  VMI  G+  D    N
Sbjct: 484 ISAELILGSTSEAFQLTEVMISRGISSDTVTYN 516



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 18/232 (7%)

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           LA  +EM    + P      +V++ L  + +  +   +  +M  +G+ P  +TYNT++ S
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 493 FCKCKDLRKAFQLLNQMWLH--NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
           F +   + +A +LL +M        P+  TYN++I+GL   G+L+ A   LV     +  
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKA-AQLVDRMRMSKK 299

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------------TKSF 595
            +   +  +I  + A G V KA     +M  +G   ++  Y                +  
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           F  M + G  PD      ++  + + G+L     L   + ++GL P     N
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYN 411


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 236/477 (49%), Gaps = 38/477 (7%)

Query: 22  MKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSR 78
           MKE  +  +I+T NSLL     L  T+  W LY ++       +VYT +I+I+ L     
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVL----- 231

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
                                         CK G  + AK     M   G+ P+  +YN 
Sbjct: 232 ------------------------------CKEGKLKKAKDFVGHMETSGVKPNIVTYNT 261

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           ++HG C +G +E A      M R  +EPD+ TY  L  G     ++  A K+ ++++ KG
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG 321

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P  V Y  LI G+C  GN++     ++ ML +G    +  Y+ L+ ++    R DEA 
Sbjct: 322 LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAE 381

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            ++ E++  G+ PD +TY+ILI G C+     KA  L++EM +  I P    + ++L  L
Sbjct: 382 CMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVL 441

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
            +K  + EA   F  +     + D +++N +IDG+    N+  A +L + +   ++ P  
Sbjct: 442 SKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDE 501

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VTFN+++ G C+ GKV +AR L D +K  G++P  +++ T ++ Y   G+I+    +  E
Sbjct: 502 VTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNE 561

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           M      PT +TY  +++GLCK  +   A +LL++M   G+TPD  TY T+I    K
Sbjct: 562 MLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 242/503 (48%), Gaps = 39/503 (7%)

Query: 64  YTNSIVIDGL----CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           + +SIV D L    C  +R  +A         K   P++ + N+++S + KL   E A  
Sbjct: 148 FKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV 207

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L+  M +  +    +++NI+I+ LC  G +++A +F   M   GV+P+            
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPN------------ 255

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
                                  IVTY  ++ GYC  G VE    +   M  Q  + +  
Sbjct: 256 -----------------------IVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSF 292

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y  L+S MCK GR++EA  +  EM   GL+P  V Y+ LI G C +  +  A    +EM
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM 352

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K ISP    + +++  L  ++   EA      +       D + YNI+I+GY +  N 
Sbjct: 353 LKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANA 412

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A  L+ +++   I P+  T+ SL++   K  ++ +A  L   I   G+ P A+ +   
Sbjct: 413 KKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNAL 472

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ +C   N++    LL++M+   + P  VT+  +++G C++ K++EA +L ++M   G+
Sbjct: 473 IDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGI 532

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD I++NT+I  + +  D++ AF++ N+M      PT  TYN L+ GLC N +   A+ 
Sbjct: 533 KPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEE 592

Query: 540 LLVSLQEHNISLTKVAYTTIIKA 562
           LL  +    ++     Y T+I+ 
Sbjct: 593 LLKEMVSKGMTPDDTTYFTLIEG 615



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 243/502 (48%), Gaps = 22/502 (4%)

Query: 142 GLCIAGSMEEALEF-TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
           G     S+ E  EF      R G +  +I +  L K    +++   A++    +  KG  
Sbjct: 125 GGGTTNSIREIFEFLAASRDRLGFK-SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVL 183

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P I T   L+  + ++   E    L   M     K +V  ++++++ +CK G++ +A   
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           +  ME  G+KP++VTY+ ++ G C   +V  A  +   M  ++I P+SF +G+++ G+C+
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCK 303

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
           +  + EA   F+ ++        V+YN +IDG+   GN+  A     ++++K ISP++ T
Sbjct: 304 QGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMST 363

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +NSLI+      +  +A  ++  I+  G+ P A+TY   +N YC   N ++   L  EM 
Sbjct: 364 YNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEML 423

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
              I PT  TYT ++  L K+ +++EA  L + +   GV PD I +N +I   C   +++
Sbjct: 424 ASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVK 483

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
            AF+LL  M    + P   T+N ++ G C  G ++ A  L   ++   I    +++ T+I
Sbjct: 484 GAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
             +   GD+  A     +M++ GF  ++  Y                Q +C+      +Q
Sbjct: 544 SGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALV------------QGLCK------NQ 585

Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
            GDL    EL   M+  G+ PD
Sbjct: 586 EGDLAE--ELLKEMVSKGMTPD 605



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 160/344 (46%), Gaps = 15/344 (4%)

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C+     EA   F ++     +  +   N ++  ++KL     A  LY ++   RI  S+
Sbjct: 162 CDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSV 221

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            TFN +I   CK GK+  A+  +  ++  G++P+ VTY T ++ YC  G ++   A+L  
Sbjct: 222 YTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTT 281

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M+ + I P   TY  +I G+CKQ +L+EA ++ E+M   G+ P  + YNT+I  FC   +
Sbjct: 282 MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L  A    ++M    + PT +TYN LI  L +      A+C++  +QE  IS   + Y  
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNG 603
           +I  +C   +  KA     +M+  G + + + YT                  F  + S G
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             PD  +   ++       ++   FEL   M +  + PD+   N
Sbjct: 462 VLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFN 505



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 179/394 (45%), Gaps = 44/394 (11%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPR 61
           V  + G +  A   +  M+   +K +I TYN++++   +    +    +   +K  +   
Sbjct: 230 VLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA---- 117
           + +T   +I G+C+Q RL++A    +E   K   PS V  N ++  +C  G  ++A    
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK 349

Query: 118 -----KGLFCLMLKY--------------------------GLHPDAFSYNILIHGLCIA 146
                KG+   M  Y                          G+ PDA +YNILI+G C  
Sbjct: 350 DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRC 409

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS---QISGAWKVIQKLLIKGSDPDI 203
            + ++A    ++M   G++P   TY+ L    H+LS   ++  A  + +K+  +G  PD 
Sbjct: 410 ANAKKAFLLHDEMLASGIKPTKKTYTSL---LHVLSKKNRMKEADDLFKKITSEGVLPDA 466

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           + +  LI G+C   NV+   +L + M       + + ++ ++   C+ G+++EA  L  E
Sbjct: 467 IMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M+  G+KPD ++++ LI G  ++  +  A ++ NEM     +P    + A++ GLC+ + 
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
              A      ++      D   Y  +I+G  K+ 
Sbjct: 587 GDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 128/258 (49%), Gaps = 10/258 (3%)

Query: 4   FVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETP 60
           F+  RT    +A  +I +++E  +     TYN L+       +    + L+D++  S   
Sbjct: 372 FMEQRTD---EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIK 428

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
               T + ++  L +++R+++A    ++   +   P  +  NA++  +C     + A  L
Sbjct: 429 PTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFEL 488

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M +  + PD  ++N ++ G C  G +EEA E  ++M R G++PD I+++ L  G+  
Sbjct: 489 LKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSR 548

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC--QIGNVEEGLKLREVMLSQGFKLNV 238
              I  A++V  ++L  G +P ++TY  L+ G C  Q G++ E L L+E M+S+G   + 
Sbjct: 549 RGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEEL-LKE-MVSKGMTPDD 606

Query: 239 IAYSVLLSSMCKSGRIDE 256
             Y  L+  + K    DE
Sbjct: 607 TTYFTLIEGIAKVNIPDE 624


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 266/553 (48%), Gaps = 16/553 (2%)

Query: 78   RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
            +L DAI     +   E  P   + N +++   KLG+      ++  +   G+ PD ++ N
Sbjct: 926  KLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLN 985

Query: 138  ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
            ILIH  C   ++           + G EPDA+T + L KG  + + I  A ++  ++  K
Sbjct: 986  ILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKK 1045

Query: 198  GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
            G   D  TY +LI G C+       +KL E M     K +V  Y +++ ++CK G   EA
Sbjct: 1046 GLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALCKDGMTTEA 1104

Query: 258  LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
            L +  EM   G+ PD+V YS L+ GLC+  ++ +A++ + EM  + IS + + + +++ G
Sbjct: 1105 LDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHG 1164

Query: 318  LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
            L    +  E   + + ++      D   + I+IDG  K G +GEA Q+   +  K   P 
Sbjct: 1165 LSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPD 1224

Query: 378  IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            I+T+N+L+ G C  G++ DA +L +++   G++ +  +Y   +N YC++  I       +
Sbjct: 1225 ILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFE 1284

Query: 438  EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            EM  K + P+ VTY  +I  LC+  +++ A +L  +M   G      TY  ++   CK  
Sbjct: 1285 EMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNG 1344

Query: 498  DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
             L +A  L   +     +P    ++IL+DG+C  G L+ A      + ++ +    +AY 
Sbjct: 1345 HLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYN 1404

Query: 558  TIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTKS--------FFCMMLSN 602
             +I   C +G + +A+    QM EKG       F + I++  K             M + 
Sbjct: 1405 ILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNR 1464

Query: 603  GFPPDQEICEVML 615
             F PD+ +  ++L
Sbjct: 1465 NFSPDEAVTSMLL 1477



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 263/554 (47%), Gaps = 4/554 (0%)

Query: 33   TYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
            T+N LL +   L +   ++ +Y  I       ++YT +I+I   C    +          
Sbjct: 948  TFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGF 1007

Query: 90   AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
              + F P  V++  ++           A  LF  M K GL  DA +Y ILI+GLC A   
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067

Query: 150  EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
              A++    M +   + D  TY ++          + A  +  +++  G  PD+V Y+ L
Sbjct: 1068 GLAIKLHEKM-KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 1126

Query: 210  ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
            + G C+ G ++E L+  + M  +G   +V  Y+ L+  + ++G   E    L  M   G 
Sbjct: 1127 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186

Query: 270  KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
             PD  T++ILI GLCK+ KV +A Q+   M  K   P+   +  ++ GLC    + +A  
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATK 1246

Query: 330  YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             F+SL       +V  YNI+I+GY K   I EA + + ++  K + PS VT+N+LI   C
Sbjct: 1247 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALC 1306

Query: 390  KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
            ++G+V  A++L   ++  G      TY   ++  C+ G+++  + L Q ++     P   
Sbjct: 1307 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIE 1366

Query: 450  TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
             +++++ G+C+  KL+EA +  +++   G+ PD I YN +I   C    L +A +LL QM
Sbjct: 1367 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQM 1426

Query: 510  WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
                  P S T+N++I  L    ++  A  LL  ++  N S  +   + ++     +   
Sbjct: 1427 EEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQW 1486

Query: 570  HKAMTFFCQMVEKG 583
            H A+      ++KG
Sbjct: 1487 HAALVSLPNALQKG 1500



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 235/517 (45%), Gaps = 21/517 (4%)

Query: 131  PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
            P   ++N L+  +   G           +   G++PD  T +IL      L  +   + V
Sbjct: 944  PCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGV 1003

Query: 191  IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
                L +G +PD VT T L+ G      + + ++L + M  +G   +   Y +L++ +CK
Sbjct: 1004 FGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCK 1063

Query: 251  SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            + +   A+ L  +M+    K D+ TY ++I  LCK     +A+ +++EM    I P+   
Sbjct: 1064 ARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVV 1122

Query: 311  HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
            + +++ GLC    + EA  +F  +       DV  YN +I G  + G   E       ++
Sbjct: 1123 YSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 1182

Query: 371  EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            ++  SP   TF  LI G CK GKV +A+++L+ ++  G EP  +TY T MN  C  G ++
Sbjct: 1183 DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLE 1242

Query: 431  RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
                L + +  + I     +Y ++I G CK  K+ EA +  E+M   G+ P  +TYNT+I
Sbjct: 1243 DATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLI 1302

Query: 491  RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             + C+   +R A +L  +M         +TY +L+DGLC NG L+ A  L  S+++    
Sbjct: 1303 GALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHK 1362

Query: 551  LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEI 610
                 ++ ++   C  G + +A   F        EIS              NG  PD   
Sbjct: 1363 PNIEVFSILLDGMCRAGKLEEAWKQFD-------EIS-------------KNGLEPDTIA 1402

Query: 611  CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              +++      G L    +L   M + G LPD    N
Sbjct: 1403 YNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFN 1439



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 184/349 (52%), Gaps = 9/349 (2%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT----DIMWDLYDDIKVSETPRNV 63
            R G + +A+    +M+   +   + TYNSL++ L       ++ W L   +    +P + 
Sbjct: 1132 RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP-DA 1190

Query: 64   YTNSIVIDGLCQQSRLQDA--ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            +T +I+IDGLC++ ++ +A  IL L    GKE  P +++ N +M+  C +G  E A  LF
Sbjct: 1191 FTFTILIDGLCKEGKVGEAQQILELMRHKGKE--PDILTYNTLMNGLCLVGQLEDATKLF 1248

Query: 122  CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              +   G+  + FSYNILI+G C    ++EA  F  +M   G++P  +TY+ L       
Sbjct: 1249 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQS 1308

Query: 182  SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             ++  A K+  ++   G    + TY VL+ G C+ G++EE + L + +     K N+  +
Sbjct: 1309 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVF 1368

Query: 242  SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            S+LL  MC++G+++EA     E+   GL+PD + Y+ILI GLC +  + +A++L  +M  
Sbjct: 1369 SILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE 1428

Query: 302  KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            K   P+S     I+  L ++  I EA    + +   N   D  + ++++
Sbjct: 1429 KGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 177/612 (28%), Positives = 287/612 (46%), Gaps = 37/612 (6%)

Query: 66  NSIVID----GLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKG 119
           N+IVI+    GLC   RL +A+  L +    E G  P VVS N ++  +C    AE A  
Sbjct: 128 NNIVINQLLKGLCDAKRLCEAMDILVKRM-PELGCTPDVVSYNTLLKGFCNEKRAEEALE 186

Query: 120 LFCLMLK---YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           L  +M         P+  SY I+I+G    G +++A     +M   G++P+ +TY+ +  
Sbjct: 187 LLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVID 246

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G      +  A  V Q+++ KG  PD  TY  LI GY  IG  +E +++ E M + G K 
Sbjct: 247 GLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKP 306

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +   Y  LL+ +C +GR  EA  L   M   G+KP++  Y ILI G   +  + +   L 
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           N M    +SP+      I     +K MI EA   F+ +       DVV Y  +ID   KL
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKL 426

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G + +AV  + Q++ + ++P+I  FNSL+YG C   K   A+     +   G+ P  V +
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T +   C +G + +   L+  ME     P  ++YT +I G C   ++ EA + L+ M  
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
           +G+ PD+ TYNT++  +C+   +  A+ +  +M  + + P   TY+ ++ GL        
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606

Query: 537 ADCL----LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           A  L    + S ++ NI +  +    + K +C    V +A   F  +  K F++ I  + 
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNC----VDEAFKLFQSLCSKDFQLEITTFN 662

Query: 593 -------KS--------FFCMMLSNGFPPDQEICEVMLIAFH--QGGDLGSVFELAAVMI 635
                  KS         F  + S G  PD  +    LIA +  + G L    +L + M 
Sbjct: 663 IMIGALFKSGRNEDAMHLFATISSYGLVPD--VFTYCLIAENLIEEGYLEEFDDLFSAME 720

Query: 636 KSGLLPDKFLIN 647
           KSG  P+  ++N
Sbjct: 721 KSGTTPNSRMLN 732



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 151/572 (26%), Positives = 272/572 (47%), Gaps = 6/572 (1%)

Query: 18  VIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYD---DIKVSETPRNVYTNSIVID 71
           ++ +M EL     + +YN+LL    N +  +   +L     D +    P NV + +IVI+
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           G   + ++  A     E   +   P+VV+   ++   CK    + A+G+F  M+  G+ P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  +YN LIHG    G  +E +    +M  HG++PD  TY  L        +   A  + 
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLF 331

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             ++ KG  P++  Y +LI GY   G + E   L  +M+  G   +   ++++ ++  K 
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
             IDEA+ +  +M+  GL PD+V Y  LI  LCK  +V  A+  +N+M ++ ++PN F  
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
            +++ GLC  +   +A+ ++  ++      DVV +N ++      G + +A +L   +  
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER 511

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
               P ++++ +LI G C  G++ +A + LD +   GL+P   TY T ++ YC  G I  
Sbjct: 512 VGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDD 571

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              + +EM    I P  VTY+ ++ GL    +  EA +L  +M   G   +   YN I+ 
Sbjct: 572 AYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILN 631

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
              K   + +AF+L   +   + +    T+NI+I  L  +G  ++A  L  ++  + +  
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
               Y  I +    EG + +    F  M + G
Sbjct: 692 DVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 250/529 (47%), Gaps = 4/529 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE- 154
           P   + + ++  +C++G  E     F L+LK G   +    N L+ GLC A  + EA++ 
Sbjct: 92  PDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDI 151

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI---KGSDPDIVTYTVLIC 211
               M   G  PD ++Y+ L KGF    +   A +++  +     +   P++V+Y ++I 
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           G+   G V++   L   M+ +G + NV+ Y+ ++  +CK+  +D A G+  +M   G+KP
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D  TY+ LI G     K  + +++  EM +  + P+ + +G++L  LC      EAR  F
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLF 331

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           DS+I      +V +Y I+I GY   G + E   L   ++E  +SP    FN +   + K 
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
             + +A  + + +K  GL P  V Y   ++A C+ G +   +    +M  + + P    +
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             ++ GLC   K ++A +   +M   G+ PD + +NTI+ + C    + KA +L++ M  
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER 511

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
               P   +Y  LI G C+ G +  A   L  +    +   +  Y T++  +C  G +  
Sbjct: 512 VGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDD 571

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
           A   F +M+  G    +  Y+     +  +  F   +E+   M+ +  Q
Sbjct: 572 AYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 128/497 (25%), Positives = 220/497 (44%), Gaps = 19/497 (3%)

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           V PD  TYSIL   F  + ++   +     +L  G   + +    L+ G C    + E +
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 224 K-LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM---EAVGLKPDLVTYSIL 279
             L + M   G   +V++Y+ LL   C   R +EAL LL+ M   +     P++V+Y+I+
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I G   + +V KA  L+ EM  + I PN   +  ++ GLC+ +++  A   F  +I    
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             D   YN +I GY+ +G   E V++  ++    + P   T+ SL+   C NG+  +AR 
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L D++   G++P+   Y   ++ Y  +G +  +  LL  M    + P H  + ++     
Sbjct: 330 LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K+  + EA+ +   M   G++PD + Y  +I + CK   +  A    NQM    + P   
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            +N L+ GLC     + A      +    I    V + TI+   C +G V KA      M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509

Query: 580 VEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDL 624
              G    +  YT      C+             MLS G  PD+     +L  + + G +
Sbjct: 510 ERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569

Query: 625 GSVFELAAVMIKSGLLP 641
              + +   M+++G+ P
Sbjct: 570 DDAYGVFREMLRNGITP 586



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 228/487 (46%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I G     + ++ +  L+E +     P   +  ++++  C  G    A+ LF  M
Sbjct: 275 TYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSM 334

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G+ P+   Y ILIHG    G++ E  +  N M  +G+ PD   ++I+   +   + I
Sbjct: 335 IRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMI 394

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +  K+  +G  PD+V Y  LI   C++G V++ +     M+++G   N+  ++ L
Sbjct: 395 DEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL 454

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +C   + ++A    +EM   G++PD+V ++ ++  LC + +V KA +L + M     
Sbjct: 455 VYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGT 514

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P   ++  ++ G C    I EA    D ++      D   YN ++ GY + G I +A  
Sbjct: 515 RPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYG 574

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           ++R+++   I+P +VT++++++G     + ++A+ L   +   G + +   Y   +N   
Sbjct: 575 VFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLS 634

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +   +     L Q + +K       T+ ++I  L K  + ++A+ L   +   G+ PD  
Sbjct: 635 KNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVF 694

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TY  I  +  +   L +   L + M      P S   N L+  L   GD+  A   L  L
Sbjct: 695 TYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKL 754

Query: 545 QEHNISL 551
            E N SL
Sbjct: 755 DEKNFSL 761



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 220/473 (46%), Gaps = 5/473 (1%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKV----SETPRNVY 64
            G   +A F+   M    +K ++  Y  L++       + +++D + +      +P +  
Sbjct: 321 NGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            N I+     +++ + +A+    +   +   P VV+  A++   CKLG  + A   F  M
Sbjct: 381 FN-IIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQM 439

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G+ P+ F +N L++GLC     E+A EF  +M   G+ PD + ++ +        Q+
Sbjct: 440 MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++I  +   G+ P +++YT LI G+C +G ++E  K  +VMLS G K +   Y+ L
Sbjct: 500 MKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L   C++GRID+A G+  EM   G+ P +VTYS ++ GL    +  +A +LY  M +   
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK 619

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             N + +  IL GL +   + EA   F SL   +   ++  +NIMI    K G   +A+ 
Sbjct: 620 QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMH 679

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+  +    + P + T+  +     + G + +   L   ++  G  P++      +    
Sbjct: 680 LFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLL 739

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             G+I R  A L +++ K       T  ++I  L +      A  L E   V+
Sbjct: 740 HRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVL 792



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 212/499 (42%), Gaps = 40/499 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNV 63
           +  +V  A  V  +M +  +K    TYN L++        W     + +++       + 
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIG-KWKEVVRMLEEMSAHGLKPDC 308

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           YT   +++ LC   R ++A         K   P+V     ++  Y   G       L  L
Sbjct: 309 YTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNL 368

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M++ GL PD   +NI+         ++EA+   N M + G+ PD + Y  L      L +
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGR 428

Query: 184 ISGA-------------------------------WKVIQ----KLLIKGSDPDIVTYTV 208
           +  A                               W+  +    ++L +G  PD+V +  
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNT 488

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           ++C  C  G V +  +L ++M   G +  VI+Y+ L+   C  GRIDEA   L  M +VG
Sbjct: 489 ILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG 548

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           LKPD  TY+ L+ G C+  ++  A  ++ EM    I+P    +  IL GL      +EA+
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAK 608

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             + ++I S    ++ +YNI+++G  K   + EA +L++ L  K     I TFN +I   
Sbjct: 609 ELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            K+G+  DA  L  TI  +GL P   TY        EEG ++    L   ME     P  
Sbjct: 669 FKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNS 728

Query: 449 VTYTVVIKGLCKQWKLQEA 467
                +++ L  +  +  A
Sbjct: 729 RMLNALVRRLLHRGDITRA 747



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 202/461 (43%), Gaps = 35/461 (7%)

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK-SGRIDEA------LGLLYEME---AVG 268
           +++ LKL + +L+     +VIA++ LL+++ + SGR          + L   M     + 
Sbjct: 30  LDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           + PD  TYSILI   C+  ++      +  +       N+     +L GLC+ + + EA 
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEA- 148

Query: 329 MYFDSLIMS----NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE---KRISPSIVTF 381
              D L+       C  DVV YN ++ G+       EA++L   + +   +   P++V++
Sbjct: 149 --MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSY 206

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
             +I GF   G+V  A  L   +   G++P+ VTYTT ++  C+   + R   + Q+M  
Sbjct: 207 AIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMID 266

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           K + P + TY  +I G     K +E V++LE+M   G+ PD  TY +++   C     R+
Sbjct: 267 KGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCRE 326

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A  L + M    ++P  A Y ILI G    G L     LL  + E+ +S     +  I  
Sbjct: 327 ARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFT 386

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF---------------FCMMLSNGFPP 606
           A+  +  + +AM  F +M ++G    + +Y                   F  M++ G  P
Sbjct: 387 AYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAP 446

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +  +   ++             E    M+  G+ PD    N
Sbjct: 447 NIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 170/338 (50%), Gaps = 11/338 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD-----LYDDIKVSETPRN 62
           + G V DAV    +M    +  +I  +NSL+Y L   D  W+      ++ +     P  
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVD-KWEKAKEFYFEMLNQGIRPDV 483

Query: 63  VYTNSIVIDGLCQQSRLQDA--ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           V+ N+I+ + LC + ++  A  ++ L E  G    P V+S   ++  +C +G  + A   
Sbjct: 484 VFFNTILCN-LCTKGQVMKAQRLIDLMERVGTR--PGVISYTTLIGGHCLVGRIDEAAKS 540

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             +ML  GL PD ++YN L+HG C AG +++A     +M R+G+ P  +TYS +  G   
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT 600

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             + S A ++   ++  G   +I  Y +++ G  +   V+E  KL + + S+ F+L +  
Sbjct: 601 TRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           +++++ ++ KSGR ++A+ L   + + GL PD+ TY ++   L ++  + +   L++ M 
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAME 720

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
               +PNS    A++  L  +  IT A  Y   L   N
Sbjct: 721 KSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKN 758



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 3/208 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y R G + DA  V  +M    +   + TY+++L+ L   R      +LY ++  S    N
Sbjct: 563 YCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWN 622

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           ++  +I+++GL + + + +A    Q    K+F   + + N ++    K G  E A  LF 
Sbjct: 623 IWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFA 682

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +  YGL PD F+Y ++   L   G +EE  +  + M + G  P++   + L +      
Sbjct: 683 TISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRG 742

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            I+ A   + KL  K    +  T  +LI
Sbjct: 743 DITRAGAYLCKLDEKNFSLEASTTAMLI 770


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 240/467 (51%), Gaps = 7/467 (1%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P    +  ++  L        A+  +  M   G+EPD +T SIL   F  L Q++ ++ V
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           + K+L  G  P+ +  T L+ G C  G V++ L   + +++QGF++N ++Y  LL+ +CK
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G    A+ LL  +E    +PD+V Y+ +I GLCK   V++A   Y EM S+ I P+   
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C    +  A    + + + N   DV  Y I+ID   K G + EA  L   + 
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           ++ + P++VT+++L+ G+C  G+V +A+++   +    + PS  +Y   +N  C+  ++ 
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             + LL+EM  K + P  VTY  +I GLCK  ++  A+ L+++++  G   D ITY +++
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLL 489

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CK ++L KA  L  +M    ++P   TY  LIDGLC    LKNA  L   +      
Sbjct: 490 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCC 549

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRD 590
           +    Y  +I   C EG + +A+    +M + G       FEI IR 
Sbjct: 550 IDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRS 596



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 244/473 (51%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++  L +      AI   ++   K   P +V+L+ +++ +C LG    +  +   +LK G
Sbjct: 138 ILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLG 197

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P+      L+ GLC+ G ++++L F + +   G + + ++Y  L  G   + +   A 
Sbjct: 198 YQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAI 257

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           K+++ +  + + PD+V Y  +I G C+   V E       M S+G   +VI YS L+   
Sbjct: 258 KLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGF 317

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C +G++  A  LL EM    + PD+ TY+ILI  LCK+ K+ +A  L   M  + + PN 
Sbjct: 318 CLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNV 377

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  ++ G C    +  A+  F +++ +     V  YNIMI+G  K  ++ EA+ L R+
Sbjct: 378 VTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLRE 437

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           ++ K + P+ VT+NSLI G CK+G++  A  L+  +   G     +TYT+ ++  C+  N
Sbjct: 438 MLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQN 497

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           + + +AL  +M+ + I P   TYT +I GLCK  +L+ A +L + + V G   D  TYN 
Sbjct: 498 LDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNV 557

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +I   CK   L +A  + ++M  +   P + T+ I+I  L    +   A+ LL
Sbjct: 558 MIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLL 610



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 248/504 (49%), Gaps = 7/504 (1%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNS 67
           +VHDAV     M  +    SI  +  +L +L   +H      L   ++V     ++ T S
Sbjct: 112 VVHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLS 171

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC--LML 125
           I+I+  C   ++  +   L +     + P+ + L  +M   C  G  EV K L     ++
Sbjct: 172 ILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKG--EVKKSLHFHDKVV 229

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G   +  SY  L++GLC  G    A++    +      PD + Y+ +  G      ++
Sbjct: 230 AQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVN 289

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A+    ++  +G  PD++TY+ LICG+C  G +     L   M  +    +V  Y++L+
Sbjct: 290 EAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILI 349

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
            ++CK G++ EA  LL  M   G+KP++VTYS L+ G C   +VH A Q+++ M    ++
Sbjct: 350 DALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVN 409

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+  ++  ++ GLC+ + + EA      ++  N + + V YN +IDG  K G I  A+ L
Sbjct: 410 PSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDL 469

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
            ++L  +     ++T+ SL+ G CKN  +  A  L   +K  G++P+  TYT  ++  C+
Sbjct: 470 MKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCK 529

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
              ++    L Q +  K       TY V+I GLCK+  L EA+ +   M   G  PD +T
Sbjct: 530 GARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVT 589

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQM 509
           +  IIRS  +  +  KA +LL++M
Sbjct: 590 FEIIIRSLFEKDENDKAEKLLHEM 613



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 233/491 (47%), Gaps = 17/491 (3%)

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           P  I +  +      +     A  + +++ +KG +PD+VT ++LI  +C +G +     +
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
              +L  G++ N I  + L+  +C  G + ++L    ++ A G + + V+Y  L+ GLCK
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
             +   AI+L   +  +   P+   +  I+ GLC+ +++ EA  ++  +       DV+ 
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y+ +I G+   G +  A  L  ++  K I+P + T+  LI   CK GK+ +A+ LL  + 
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             G++P+ VTY+T M+ YC  G +     +   M    + P+  +Y ++I GLCK   + 
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA-TYNIL 524
           EA+ LL +M    V P+ +TYN++I   CK   +  A  L+ ++  H  +P    TY  L
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELH-HRGQPADVITYTSL 488

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +DGLC N +L  A  L + ++E  I   K  YT +I   C    +  A   F  ++ KG 
Sbjct: 489 LDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGC 548

Query: 585 EISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
            I +  Y                 +    M  NG  PD    E+++ +  +  +     +
Sbjct: 549 CIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEK 608

Query: 630 LAAVMIKSGLL 640
           L   MI  GLL
Sbjct: 609 LLHEMIAKGLL 619



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 194/378 (51%), Gaps = 9/378 (2%)

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           S  P  V  N+I IDGLC+   + +A  F  E   +   P V++ + ++  +C  G    
Sbjct: 267 STRPDVVMYNTI-IDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMG 325

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  L   M    ++PD ++Y ILI  LC  G ++EA      M + GV+P+ +TYS L  
Sbjct: 326 AFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMD 385

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+ L+ ++  A ++   ++    +P + +Y ++I G C+  +V+E + L   ML +    
Sbjct: 386 GYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVP 445

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N + Y+ L+  +CKSGRI  AL L+ E+   G   D++TY+ L+ GLCK   + KAI L+
Sbjct: 446 NTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALF 505

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M  + I PN + + A++ GLC+   +  A+  F  +++  C  DV  YN+MI G  K 
Sbjct: 506 MKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKE 565

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL------- 409
           G + EA+ +  ++ +    P  VTF  +I    +  +   A +LL  +   GL       
Sbjct: 566 GMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLHFRNFH 625

Query: 410 -EPSAVTYTTFMNAYCEE 426
            E S VT    +N + +E
Sbjct: 626 GERSPVTNKVIVNFHEKE 643



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 205/452 (45%), Gaps = 25/452 (5%)

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G+ P+ +T SIL      L Q++ ++ V+ K+L  G  P+ +T T L+ G  +       
Sbjct: 6   GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCA----- 60

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           +KL  ++  +  +  +   S L  S+             +   +   +P  +        
Sbjct: 61  IKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHS---QPPSI-------- 109

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
               D VH A+  +N M   R +P+    G IL  L + +    A      + +     D
Sbjct: 110 ---HDVVHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPD 166

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           +V  +I+I+ +  LG +  +  +  ++++    P+ +   +L+ G C  G+V  +    D
Sbjct: 167 LVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHD 226

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G + + V+Y T +N  C+ G  +  + LL+ +E ++  P  V Y  +I GLCK  
Sbjct: 227 KVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDK 286

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            + EA     +M   G+ PD ITY+T+I  FC    L  AF LLN+M L N+ P   TY 
Sbjct: 287 LVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYT 346

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           ILID LC  G LK A  LL  + +  +    V Y+T++  +C  G+VH A   F  MV+ 
Sbjct: 347 ILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQT 406

Query: 583 GFEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
               S+  Y       ++ NG    + + E M
Sbjct: 407 EVNPSVCSYN------IMINGLCKGKSVDEAM 432



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/417 (21%), Positives = 175/417 (41%), Gaps = 49/417 (11%)

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           ++G   N++  S+L++ +   G++  +  +L ++  +G +P+ +T + L++G     +  
Sbjct: 4   AKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKG-----ETR 58

Query: 291 KAIQLYNEMCSKRISP-----NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
            AI+L   +  +   P     +S +H   +              YF S   S  I DVV 
Sbjct: 59  CAIKLPRMIEDRSTRPLMWLSSSLSHS--IPNFPPFLPNPTFPFYFHSQPPS--IHDVV- 113

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
                          +AV  +  ++  R +PSI+ F  ++    K      A  L   ++
Sbjct: 114 --------------HDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQME 159

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           + G+EP  VT +  +N +C  G +    ++L ++      P  +  T ++KGLC + +++
Sbjct: 160 VKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVK 219

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           +++   + +   G   +Q++Y T++   CK  + R A +LL  +   +  P    YN +I
Sbjct: 220 KSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTII 279

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           DGLC +  +  A      +    I    + Y+T+I   C  G +  A +   +M  K   
Sbjct: 280 DGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNIN 339

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             +  YT                    +++ A  + G L     L  VM K G+ P+
Sbjct: 340 PDVYTYT--------------------ILIDALCKEGKLKEAKNLLGVMTKEGVKPN 376



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 32/264 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y   G VH+A  +   M + ++  S+ +YN                              
Sbjct: 387 YCLVGEVHNAKQIFHAMVQTEVNPSVCSYN------------------------------ 416

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
             I+I+GLC+   + +A+  L+E   K   P+ V+ N+++   CK G    A  L   + 
Sbjct: 417 --IMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELH 474

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G   D  +Y  L+ GLC   ++++A+     M   G++P+  TY+ L  G    +++ 
Sbjct: 475 HRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLK 534

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A K+ Q +L+KG   D+ TY V+I G C+ G ++E L ++  M   G   + + + +++
Sbjct: 535 NAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIII 594

Query: 246 SSMCKSGRIDEALGLLYEMEAVGL 269
            S+ +    D+A  LL+EM A GL
Sbjct: 595 RSLFEKDENDKAEKLLHEMIAKGL 618



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 105/251 (41%), Gaps = 20/251 (7%)

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V DA    + + L    PS + +   + +  +  +    ++L ++ME K I P  VT ++
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I   C   ++  +  +L  +  +G  P+ I   T+++  C   +++K+    +++    
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
            +    +Y  L++GLC  G+ + A  LL  +++ +     V Y TII   C +  V++A 
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAY 292

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
            F+ +M                     S G  PD      ++  F   G L   F L   
Sbjct: 293 DFYTEMN--------------------SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNE 332

Query: 634 MIKSGLLPDKF 644
           M    + PD +
Sbjct: 333 MTLKNINPDVY 343


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 157/592 (26%), Positives = 278/592 (46%), Gaps = 26/592 (4%)

Query: 73  LCQQSRLQDAILFLQETAGKE-FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           LC  S++ D    L  T  K+ F PS  S+N ++         E    +F  ++  G  P
Sbjct: 96  LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           DA +Y   +    +   +++  E    M + G+ P    Y+++  G   + +I  A K+ 
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            +++ +   P+ VTY  LI GYC++G +EE L  +E M  Q  + N++ Y+ LL+ +C S
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGS 275

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ--LYNEMCSKRISPNSF 309
           GR+D+A  +L EME  G  P      +        D  + A    L++    K I  +  
Sbjct: 276 GRVDDAREVLLEMEGSGFLPGGFLSFVF------DDHSNGAGDDGLFD---GKEIRIDER 326

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            +  +L GLC    I +A      L+ +      + YNI+++ Y + G++ +A+    Q+
Sbjct: 327 TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQM 386

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            E+ + P+ +TFN++I  FC+ G+V  A   +  +   G+ P+  TY + +N Y ++G+ 
Sbjct: 387 EERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHF 446

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
            R    L EM+   I P  ++Y  +I  LCK  KL +A  +L DM   GV+P+   YN +
Sbjct: 447 VRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNML 506

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I + C    L+ AF+  ++M    ++ T  TYN LI+GL  NG +K A+ L + +     
Sbjct: 507 IEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGC 566

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY--------------TKSF 595
           +   + Y ++I  +    +  K +  + +M   G + ++  +                  
Sbjct: 567 NPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKM 626

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           F  ML     PDQ +   M+ ++ + G++     L   M+  G+  DK   N
Sbjct: 627 FQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYN 678



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 147/584 (25%), Positives = 279/584 (47%), Gaps = 35/584 (5%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+  ++V+ GLC+  R++DA     E   +   P+ V+ N ++  YCK+G  E A G  
Sbjct: 191 SVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFK 250

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP--------------- 166
             M +  +  +  +YN L++GLC +G +++A E   +M   G  P               
Sbjct: 251 ERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGA 310

Query: 167 -------------DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
                        D  TY IL  G   + +I  A +V+ KL+  G  P  ++Y +L+  Y
Sbjct: 311 GDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAY 370

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           CQ G+V++ +   E M  +G + N I ++ ++S  C++G +D A   +  M   G+ P +
Sbjct: 371 CQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTV 430

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            TY+ LI G  ++    +  +  +EM    I PN  ++G+++  LC+   + +A +    
Sbjct: 431 ETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLAD 490

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +I      +  +YN++I+    L  + +A + + ++I+  I  ++VT+N+LI G  +NG+
Sbjct: 491 MIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGR 550

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V  A  L   +   G  P  +TY + ++ Y +  N Q+ L L  +M+   I PT  T+  
Sbjct: 551 VKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHP 610

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I   C++  +    ++ ++M  + + PDQ  YN +I S+ +  ++ KA  L  QM    
Sbjct: 611 LIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQG 669

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           ++    TYN LI     +  +     L+  ++   +      Y  +IK  C   D + A 
Sbjct: 670 VDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAY 729

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIA 617
            ++ +MVE+G  +++        C  L +G   +  + E  +++
Sbjct: 730 FWYREMVERGLLLNVS------MCYQLISGLREEGMLREAQIVS 767



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 223/471 (47%), Gaps = 34/471 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           R G +  A  V+AK+ E  +  S  +YN                                
Sbjct: 337 RVGRIEKAEEVLAKLVENGVTPSKISYN-------------------------------- 364

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I+++  CQ+  ++ AIL  ++   +   P+ ++ N ++S++C+ G  + A+     M++ 
Sbjct: 365 ILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEK 424

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+ P   +YN LI+G    G      EF ++M + G++P+ I+Y  L        ++  A
Sbjct: 425 GVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDA 484

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             V+  ++ +G  P+   Y +LI   C +  +++  +  + M+  G    ++ Y+ L++ 
Sbjct: 485 EIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLING 544

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           + ++GR+ +A  L  +M   G  PD++TY+ LI G  K     K ++LY++M    I P 
Sbjct: 545 LGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPT 604

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
                 ++   C KE +      F  ++  + + D  +YN MI  Y + GN+ +A+ L++
Sbjct: 605 VGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQ 663

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           Q++++ +    VT+NSLI  + ++ +V++ + L+D +K  GL P   TY   +   C+  
Sbjct: 664 QMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLK 723

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
           +        +EM  + +         +I GL ++  L+EA Q++     IG
Sbjct: 724 DFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREA-QIVSSELSIG 773



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 192/415 (46%), Gaps = 10/415 (2%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN------LRHTDIMWDLYDDI 54
           +L   Y + G V  A+    +M+E  L+ +  T+N+++        + H +       + 
Sbjct: 365 ILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEK 424

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
            VS T   V T + +I+G  Q+        FL E       P+V+S  ++++  CK    
Sbjct: 425 GVSPT---VETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKL 481

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
             A+ +   M+  G+ P+A  YN+LI   C    +++A  F ++M + G++   +TY+ L
Sbjct: 482 IDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTL 541

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G     ++  A  +  ++  KG +PD++TY  LI GY +  N ++ L+L + M   G 
Sbjct: 542 INGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGI 601

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           K  V  +  L+ +  K G +     +  EM  + L PD   Y+ +I    +   V KA+ 
Sbjct: 602 KPTVGTFHPLIYACRKEGVVTMD-KMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMS 660

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L+ +M  + +  +   + +++L       ++E +   D +     +  V  YNI+I G  
Sbjct: 661 LHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLC 720

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
            L +   A   YR+++E+ +  ++     LI G  + G + +A+ +   + + GL
Sbjct: 721 DLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGGL 775


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 261/525 (49%), Gaps = 4/525 (0%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D+ ++++D +       N  T S +I+GLC + RL++A+  L+E   K   P+V +    
Sbjct: 254 DLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIP 313

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +   C  G +  A  L   M K G  P+  +Y  LI GL   G  E A+   + M   G+
Sbjct: 314 IVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGL 373

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            P A+TYS L    ++  +   A  + + +L   S P+  TY V+I G+C IG +++   
Sbjct: 374 VPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATA 433

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           + + ML  G   NVI Y++++    K G ++ A+ LL  M+  GLK D  TY+ LI G  
Sbjct: 434 IFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFS 493

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           +  K+  A  L+NEM    ISPN   + AI+ G      + +A   F  ++ S  +    
Sbjct: 494 RGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSG 553

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            YN+MI G+ K   I EA     +++++ + P+++T+ S I G CKNG+ + A ++   +
Sbjct: 554 TYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEM 613

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           K     P+  TY++ ++  C+EG  +    LL +       P   TYT +++GLC + + 
Sbjct: 614 KKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRC 669

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            EA QL+E M   G+ P +  Y  ++   CK  ++  A ++ + M     +P  + Y  L
Sbjct: 670 YEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKAL 729

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
           I  LC     + A C+  ++ + + +  +V +T ++     EG+ 
Sbjct: 730 ICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGET 774



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 151/564 (26%), Positives = 276/564 (48%), Gaps = 19/564 (3%)

Query: 93  EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           +FG ++ S + ++ +  K     + + ++  ML  G+ P+ F++N +I  LC  G ++EA
Sbjct: 162 DFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEA 221

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
                 +  +G  PD  TY+ L  G      +  A+++  +++  G DP+ VTY+ LI G
Sbjct: 222 ELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALING 281

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            C  G +EE + + E M+ +G +  V AY++ + S+C +GR  EA+ LL +M+  G  P+
Sbjct: 282 LCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPN 341

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           + TY+ LI GL +  K   AI +Y++M +  + P +  + A++  L  +     A   F+
Sbjct: 342 VQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFE 401

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            ++  + + +   YN++I G+  +G I +A  ++ Q+++   SP+++T+N +I+ + K G
Sbjct: 402 WMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQG 461

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
            + +A RLL+ +K +GL+    TY   ++ +   G ++   +L  EM    I P  VTY 
Sbjct: 462 YMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYN 521

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I G     K+ +A+ L   M   G  P   TYN +I  F K   + +A     +M   
Sbjct: 522 AIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQ 581

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            L P   TY   IDGLC NG    A  +   +++ +       Y+++I   C EG    A
Sbjct: 582 GLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA 641

Query: 573 MTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIA 617
                ++++ G E ++  YT                     M   G  P +EI   +L+ 
Sbjct: 642 E----RLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVG 697

Query: 618 FHQGGDLGSVFELAAVMIKSGLLP 641
             +  ++ S  ++   M+ +G  P
Sbjct: 698 QCKNLEVESALKIFDSMVTTGFQP 721



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 246/490 (50%), Gaps = 4/490 (0%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+  +I I  LC   R  +A+  L +   +  GP+V +  A++S   + G  EVA G++ 
Sbjct: 307 VHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYH 366

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML  GL P A +Y+ LI+ L + G  E AL     M  H   P+  TY+++ KGF  + 
Sbjct: 367 KMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIG 426

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            I  A  +  ++L  G  P+++TY ++I  Y + G +   ++L E+M   G KL+   Y+
Sbjct: 427 YIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYA 486

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+S   + G+++ A  L  EM   G+ P++VTY+ +I G     KV  A+ L+ +M   
Sbjct: 487 NLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVES 546

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P+S  +  ++ G  +   I+EA  +   ++    + +V+ Y   IDG  K G    A
Sbjct: 547 GNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLA 606

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +++ ++ ++   P++ T++SLI G C+ G+  DA RLLD     G EP+  TYTT +  
Sbjct: 607 FKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRG 662

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C +G       L++ M+ K + P+   Y  ++ G CK  +++ A+++ + M   G  P 
Sbjct: 663 LCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPC 722

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
              Y  +I + CK    +KA  +   M   +       + +L+DGL   G+   +  LL 
Sbjct: 723 LSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLH 782

Query: 543 SLQEHNISLT 552
            ++  N +L 
Sbjct: 783 VMESRNCTLN 792



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 162/627 (25%), Positives = 293/627 (46%), Gaps = 22/627 (3%)

Query: 26  DLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDA 82
           D   ++ ++++LL  L   D   +  D+Y ++  S    N++T + +I  LC + ++Q+A
Sbjct: 162 DFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEA 221

Query: 83  ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
            L +         P   +  +++  +CK G  ++A  +F  M+K G  P++ +Y+ LI+G
Sbjct: 222 ELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALING 281

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           LC  G +EEA++   +M   G+EP    Y+I         +   A K++ K+  +G  P+
Sbjct: 282 LCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPN 341

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           + TYT LI G  + G  E  + +   ML+ G     + YS L++ +   GR + AL +  
Sbjct: 342 VQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFE 401

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
            M +    P+  TY+++I+G C    + KA  ++++M     SPN   +  I+    ++ 
Sbjct: 402 WMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQG 461

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            +  A    + +  +    D   Y  +I G+ + G +  A  L+ +++E  ISP++VT+N
Sbjct: 462 YMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYN 521

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           ++I G+    KV DA  L   +   G  PS+ TY   ++ + +   I        +M  +
Sbjct: 522 AIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQ 581

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P  +TYT  I GLCK  +   A ++  +M      P+  TY+++I   C+      A
Sbjct: 582 GLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA 641

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            +LL+       EP   TY  L+ GLC  G    AD L+ S+++  +  ++  Y  ++  
Sbjct: 642 ERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVG 697

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPD 607
            C   +V  A+  F  MV  GF+  + DY                +  F  ML   +  D
Sbjct: 698 QCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSD 757

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVM 634
           + +  V+L    + G+     EL  VM
Sbjct: 758 EVVWTVLLDGLLKEGETDLSLELLHVM 784



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 183/402 (45%), Gaps = 22/402 (5%)

Query: 243 VLLSSMCKS-GRIDEALGLLYEMEAV-GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           +L+   C++ G +   + +L E+         L ++S L+  L K D       +Y EM 
Sbjct: 135 ILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEML 194

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +  I PN F   A++  LC K  + EA +    +       D   Y  +I G+ K GN+ 
Sbjct: 195 NSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLD 254

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A +++ ++++    P+ VT+++LI G C  G++ +A  +L+ +   G+EP+   YT  +
Sbjct: 255 LAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPI 314

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
            + C+ G     + LL +M+ +  GP   TYT +I GL +  K + A+ +   M   G+ 
Sbjct: 315 VSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLV 374

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P  +TY+ +I           A  +   M  H+  P + TYN++I G C  G ++ A  +
Sbjct: 375 PTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAI 434

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
              + +   S   + Y  II  +  +G ++ AM    +++E                MM 
Sbjct: 435 FDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAM----RLLE----------------MMK 474

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            NG   D      ++  F +GG L   F L   M++ G+ P+
Sbjct: 475 GNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPN 516



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 179/367 (48%), Gaps = 8/367 (2%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           G +  A  +  +M +     ++ TYN ++   +   + +    L + +K +    + +T 
Sbjct: 426 GYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTY 485

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I G  +  +L+ A     E       P+VV+ NAI++ Y  +   + A  LF  M++
Sbjct: 486 ANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVE 545

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  P + +YN++I G      + EA  F   M + G+ P+ ITY+    G     + S 
Sbjct: 546 SGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSL 605

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A+K+  ++  +   P++ TY+ LI G CQ G  E+     E +L  G + NV  Y+ L+ 
Sbjct: 606 AFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVR 661

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C  GR  EA  L+  M+  GL+P    Y  L+ G CK  +V  A+++++ M +    P
Sbjct: 662 GLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQP 721

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
               + A++  LC+     +A+  F +++  +   D V++ +++DG +K G    +++L 
Sbjct: 722 CLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELL 781

Query: 367 RQLIEKR 373
             ++E R
Sbjct: 782 -HVMESR 787



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 146/305 (47%), Gaps = 7/305 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           +SR G +  A  +  +M E  +  ++ TYN+++     +   D    L+  +  S    +
Sbjct: 492 FSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPS 551

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T +++I G  + +R+ +A  F  +   +   P+V++  + +   CK G   +A  +F 
Sbjct: 552 SGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFH 611

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K    P+  +Y+ LI GLC  G  E+A    +D    G EP+  TY+ L +G     
Sbjct: 612 EMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKG 667

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A ++++ +  KG  P    Y  L+ G C+   VE  LK+ + M++ GF+  +  Y 
Sbjct: 668 RCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYK 727

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+ ++CK+    +A  +   M       D V +++L+ GL K+ +   +++L + M S+
Sbjct: 728 ALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESR 787

Query: 303 RISPN 307
             + N
Sbjct: 788 NCTLN 792



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 128/282 (45%), Gaps = 9/282 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYD----DIKVSETPR 61
           Y     V DA+ +  KM E     S  TYN ++     T+ + +  +     +K    P 
Sbjct: 527 YLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLP- 585

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T +  IDGLC+  R   A     E   +++ P++ + ++++   C+ G AE A+ L 
Sbjct: 586 NVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERL- 644

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              L  G  P+  +Y  L+ GLC  G   EA +    M + G++P    Y  L  G    
Sbjct: 645 ---LDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKN 701

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A K+   ++  G  P +  Y  LIC  C+    ++   + + ML + +  + + +
Sbjct: 702 LEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVW 761

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           +VLL  + K G  D +L LL+ ME+     +  T  +L R L
Sbjct: 762 TVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLAREL 803


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 170/623 (27%), Positives = 291/623 (46%), Gaps = 39/623 (6%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +L  VY + GM+  AV     +  +  K S+ T N +L ++   + T+++W L+ ++   
Sbjct: 168 LLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK 227

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NV T +I+I+GLC +  L+ A   L++     F P++V+ N +++ YCK G  + A
Sbjct: 228 GICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 287

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M+  G+  D  +YN+ I  LC      +A      M +  + P+ +TY+ L  G
Sbjct: 288 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 347

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    +I  A +V  ++      P+ VTY  LI G+C +G+ EE L+L + M + G +LN
Sbjct: 348 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 407

Query: 238 V-----------------------IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
                                      +VL+SS+C+ G++ EA   L  M  +GL P+ +
Sbjct: 408 EHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSI 467

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY  +I G         A   +++M      P+ F +G++L GLC+   + EA+ + + L
Sbjct: 468 TYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL 527

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                  D V+YN ++    K GN+ EAV L+ ++++  + P   T++SL+ G C+ GK 
Sbjct: 528 HYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKA 587

Query: 395 ADARRLLDTIKLHG-LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
             A  L  T    G L P+ V YT  ++   + G+ +      +EM  K   P  V +  
Sbjct: 588 VTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNA 647

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I    ++ ++ +A      M   GV P+  TYN ++  F K + L +   L + M    
Sbjct: 648 IIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREG 707

Query: 514 LEPTSATYNILIDGLCVNG--DL----------KNADCLLVSLQEHNISLTKVAYTTIIK 561
           + P   T++ LI GL  +G  DL          + +  +L  + E+ +      Y T+I 
Sbjct: 708 IFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLIN 767

Query: 562 AHCAEGDVHKAMTFFCQMVEKGF 584
             C  GD+  A     +M   GF
Sbjct: 768 GMCRVGDIQGAFKLKDEMEALGF 790



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 155/658 (23%), Positives = 275/658 (41%), Gaps = 76/658 (11%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLL----YNLRHTDIMWDLYDDIKVSETPRNVYT 65
           G +  A  ++ +M+E     +I TYN+LL       R+   + +L D +       +V T
Sbjct: 247 GNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI-ELIDYMICKGIEADVCT 305

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            ++ ID LC   R   A L L++   +   P+ V+ N +++ + K G   VA  +F  M 
Sbjct: 306 YNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMS 365

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE-------------------- 165
           K+ L P+  +YN LI G C  G  EEAL   + M   G+                     
Sbjct: 366 KFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCN 425

Query: 166 ---PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
               D  T ++L        ++  A K +  +   G  P+ +TY  +I GY  IG+    
Sbjct: 426 GHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNA 485

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
               + M+  G   +   Y  LL  +CK G + EA   L  +  +    D V Y+ L+  
Sbjct: 486 FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAE 545

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK-EMITEARMYFDSLIMSNCIQ 341
            CK   +H+A+ L+++M    + P+S+ + ++L GLC K + +T   ++  ++       
Sbjct: 546 TCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFP 605

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           + V+Y  ++DG  K G+   A   + ++++K   P  V FN++I    + G++  A    
Sbjct: 606 NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFF 665

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL-------------------------- 435
            T++  G+ P+  TY   ++ + ++  + R L+L                          
Sbjct: 666 STMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKS 725

Query: 436 ---------------------LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
                                L EM    + P H  Y  +I G+C+   +Q A +L ++M
Sbjct: 726 GIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 785

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
             +G    ++  + ++R    C     A  +L+ M    L PT AT+  L+   C +  +
Sbjct: 786 EALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKI 845

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             A  L   ++   + L  VAY  +I   CA GD   A   + +M  +    +I  Y 
Sbjct: 846 AEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYA 903



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 161/653 (24%), Positives = 280/653 (42%), Gaps = 74/653 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G    A+ +I  M    ++  + TYN  + NL     +   + L   ++      N
Sbjct: 278 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 337

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEV----- 116
             T + +I+G  ++ ++  A     E +  +  P+ V+ NA++  +C +G F E      
Sbjct: 338 EVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLD 397

Query: 117 ---AKGL--------------FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
              A GL              + +M   G   D F+ N+L+  LC  G + EA +F   M
Sbjct: 398 HMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 457

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
            R G+ P++ITY  +  G+  +     A+     ++  G  P   TY  L+ G C+ GN+
Sbjct: 458 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 517

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            E  K    +      ++ + Y+ LL+  CKSG + EA+ L  +M    + PD  TYS L
Sbjct: 518 VEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 577

Query: 280 IRGLCKQDKVHKAIQLYN------------------------------------EMCSKR 303
           + GLC++ K   A+ L+                                     EM  K 
Sbjct: 578 LTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG 637

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P++ A  AI+     +  + +A  +F ++       ++  YNI++ G+ K   +   +
Sbjct: 638 TCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYL 697

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL-------DTIKLH-----GLEP 411
            LY  ++ + I P  +TF+SLI G  K+G      +LL        T+ LH     G+ P
Sbjct: 698 SLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIP 757

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
               Y T +N  C  G+IQ    L  EME    G   V  + +++GL    K ++A+ +L
Sbjct: 758 KHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVL 817

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
           + M  + + P   T+ T++  FC+   + +A +L   M L  L+     YN+LI G+C N
Sbjct: 818 DHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCAN 877

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           GD   A  L   ++  ++      Y  ++ A  A  ++ +       + E+G 
Sbjct: 878 GDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 930



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 153/568 (26%), Positives = 246/568 (43%), Gaps = 71/568 (12%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLF-CLMLKYGLHPDAFS-YNILIHGLCIAGSMEEALEFTN 157
           S  +I+   C++G    +K +F  LM  Y L     S +++LI      G ++ A+E   
Sbjct: 130 SAKSILRHLCQMGIG--SKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFE 187

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            +G  G +P   T +++        +    W + +++  KG  P++ T+ +LI G C  G
Sbjct: 188 LVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEG 247

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
           N+++   L + M   GF   ++ Y+ LL+  CK GR   A+ L+  M   G++ D+ TY+
Sbjct: 248 NLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYN 307

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           + I  LC   +  KA  L  +M  + ISPN                              
Sbjct: 308 VFIDNLCTNHRSAKAYLLLKKMRKEMISPNE----------------------------- 338

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
                 V YN +I+G+VK G IG A Q++ ++ +  +SP+ VT+N+LI G C  G   +A
Sbjct: 339 ------VTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEA 392

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
            RLLD ++  GL  +            E GN+   + +   M     G  H T  V++  
Sbjct: 393 LRLLDHMEAAGLRLN------------EHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSS 440

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LC+  KL EA + L  M  IG+ P+ ITY+ II  +    D   AF   + M      P+
Sbjct: 441 LCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPS 500

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             TY  L+ GLC  G+L  A   L  L     ++  V Y T++   C  G++H+A+  F 
Sbjct: 501 FFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFD 560

Query: 578 QMVEKGFEISIRDYTKS------------------FFCMMLSNGFPPDQEICEVMLIAFH 619
           +MV+    +    YT S                  F   M      P+  +   ++    
Sbjct: 561 KMVQN--NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLS 618

Query: 620 QGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           + G   + F     M+K G  PD    N
Sbjct: 619 KAGHPKAAFYFFEEMMKKGTCPDTVAFN 646


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 239/503 (47%), Gaps = 2/503 (0%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           S N   S+       + A   F  ML     P    +N L+  +         L  +  M
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              G+ PD  T +I+      L+++  A+  + K+L  G  PD  T+T LI G C  G +
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            E L L + M+ +GF+ NV+ Y  L++ +CK  ++ EA  +  EM   G+ P++VTY+ L
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I GLCK  +      L NEM   +I P+ F    ++  LC++ M+ EA    D +I    
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             +VV YN ++DG+     +  AV+++  ++ K    +++++N+LI G+CK   V  A  
Sbjct: 252 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 311

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L + +    L P+ VTY T ++  C  G +Q  ++L  EM  +   P  VTY  +   LC
Sbjct: 312 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 371

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K   L +A+ LL+ +      PD   Y TI+   C+  +L  A  L + +    L+P   
Sbjct: 372 KNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVW 431

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYNI+I GLC  G L  A  L   + ++  S     Y  I +      +  + +    +M
Sbjct: 432 TYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEM 491

Query: 580 VEKGFEISIRDYTKSFFCMMLSN 602
           + +GF + +   T +    MLS+
Sbjct: 492 LARGFSVDVS--TTTLLVGMLSD 512



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 158/635 (24%), Positives = 286/635 (45%), Gaps = 62/635 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y +   V  A+++  +M   +L  +  TYN+L++ L H   + D   L+ ++       +
Sbjct: 300 YCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 359

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T   + D LC+   L  A+  L+   G  + P +     I+   C+ G  E A+ LF 
Sbjct: 360 LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 419

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   GL P+ ++YNI+IHGLC  G + EA +  ++M ++G  P+  TY+++ +GF   +
Sbjct: 420 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 479

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG---------------NVEEGLKLRE 227
           +     ++++++L +G   D+ T T+L+      G               +   G ++R 
Sbjct: 480 EALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRS 539

Query: 228 V-------------------------------MLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           +                               ML      + + ++ LL+S+ K      
Sbjct: 540 LPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYST 599

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
            L L  +M++ G+ PD+ T +ILI   C   ++  A  +  ++      P+   +G ++ 
Sbjct: 600 VLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMN 659

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           GLC+  MIT+               D+  YN +I     L        L  +++  +I P
Sbjct: 660 GLCK--MITKG-----------ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP 706

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           ++V F++++   CK G +A A  ++D +   G+EP  VTYT  M+ +C    +   + + 
Sbjct: 707 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 766

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
             M  K   P   +Y ++I G C+  ++ +A+ LLE M + G+  D +TYNT+I   C  
Sbjct: 767 DTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 826

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
             L+ A  L ++M      P   TY IL+D LC N  L  A  LL +++  N+    + Y
Sbjct: 827 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVY 886

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
              I   C  G++  A   F  +  KG +  +R Y
Sbjct: 887 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTY 921



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/626 (24%), Positives = 285/626 (45%), Gaps = 63/626 (10%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L +A+        K+  PS V  N +++   K         L   M  +G+ PD ++  I
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           +I+ LC    ++ A      + + G +PDA T++ L +G  +  +I  A  +  K++ +G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P++VTY  LI G C+   V E   +   M+++G   N++ Y+ L+  +CK        
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L+ EM    + PD+ T + ++  LCK+  V +A  + + M  + + PN   + A++ G 
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C +  +  A   FD+++  +C+ +V+ YN +I+GY K+ ++ +A+ L+ ++  + ++P+ 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VT+N+LI+G C  G++ DA  L   +   G  P  VTY T  +  C+  ++ + +ALL+ 
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 385

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           +E     P    YT ++ G+C+  +L++A  L  ++   G+ P+  TYN +I   CK   
Sbjct: 386 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 445

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L +A +L ++M  +   P   TYN++  G   N +      LL  +     S+  V+ TT
Sbjct: 446 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSV-DVSTTT 504

Query: 559 IIKAHCAEGDVHK----------------------------------------------- 571
           ++    ++  + +                                               
Sbjct: 505 LLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDD 564

Query: 572 AMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLI 616
           A++ F +M+      S  D+TK               S    M S G PPD     +++ 
Sbjct: 565 ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILIN 624

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPD 642
           +F     LG  F + A ++K G  PD
Sbjct: 625 SFCHLRRLGYAFSVLAKLLKLGFQPD 650



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 155/623 (24%), Positives = 269/623 (43%), Gaps = 64/623 (10%)

Query: 10  GMVHDAVFV----IAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           G + DA+ +    +A+ +  DL V+ +T +  L   RH D    L   I+ S    ++  
Sbjct: 339 GRLQDAISLFHEMVARGQIPDL-VTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 397

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + ++DG+C+   L+DA       + K   P+V + N ++   CK G    A  LF  M 
Sbjct: 398 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 457

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL----------- 174
           K G  P+  +YN++  G          +E   +M   G   D  T ++L           
Sbjct: 458 KNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQ 517

Query: 175 --------------AKGFHLLS---------------------QISGAWKVIQKLLIKGS 199
                           G  + S                      +  A     ++L    
Sbjct: 518 SVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHP 577

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            P  V +T L+    ++ +    L L   M S G   +V   ++L++S C   R+  A  
Sbjct: 578 PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFS 637

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           +L ++  +G +PD+VTY  L+ GLCK             M +K ISP+ F + +++  LC
Sbjct: 638 VLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALC 684

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
                       + ++ S  + +VV+++ ++D   K G I  A  +   +I++ + P +V
Sbjct: 685 NLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVV 744

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T+ +L+ G C   ++ +A ++ DT+   G  P+  +Y   +N YC+   + + + LL++M
Sbjct: 745 TYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM 804

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
             + +    VTY  +I GLC   +LQ A+ L  +M   G  PD +TY  ++   CK   L
Sbjct: 805 SLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHL 864

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
            +A  LL  +   NL+     YNI IDG+C  G+L+ A  L  +L    +      Y  +
Sbjct: 865 AEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIM 924

Query: 560 IKAHCAEGDVHKAMTFFCQMVEK 582
           I   C  G + +A   F +M E 
Sbjct: 925 IHGLCKRGLLDEANKLFRKMDEN 947



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/650 (23%), Positives = 277/650 (42%), Gaps = 75/650 (11%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K+   P +  T + +I GLC + ++ +A+    +  G+ F P+VV+   +++  CK   
Sbjct: 107 LKLGHQP-DATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQ 165

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A  +F  M+  G+ P+  +YN LIHGLC     +      N+M    + PD  T + 
Sbjct: 166 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 225

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +         ++ A  V+  ++ +G +P++VTY  L+ G+C    V+  +K+ + M+ + 
Sbjct: 226 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 285

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              NVI+Y+ L++  CK   +D+A+ L  EM    L P+ VTY+ LI GLC   ++  AI
Sbjct: 286 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 345

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            L++EM ++   P+   +  +   LC+   + +A     ++  SN   D+ +Y  ++DG 
Sbjct: 346 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 405

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            + G + +A  L+  L  K + P++ T+N +I+G CK G +A+A +L   +  +G  P+ 
Sbjct: 406 CRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 465

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI-------------KGLCK 460
            TY      +       R + LL+EM  +       T T+++             + LCK
Sbjct: 466 CTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK 525

Query: 461 QWK---------------------------------LQEAVQLLEDMYVIGVTPDQITYN 487
                                               L +A+     M  +   P  + + 
Sbjct: 526 PSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFT 585

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++ S  K K       L  QM    + P   T NILI+  C    L  A  +L  L + 
Sbjct: 586 KLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKL 645

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK-------------- 593
                 V Y T+             M   C+M+ KG    I  Y                
Sbjct: 646 GFQPDVVTYGTL-------------MNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHV 692

Query: 594 -SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            +    M+++   P+  +   ++ A  + G +    ++  +MIK G+ PD
Sbjct: 693 TTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPD 742



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 140/676 (20%), Positives = 295/676 (43%), Gaps = 77/676 (11%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G + +A+ +  KM     + ++ TY +L+  L   R     ++++ ++       N+ T 
Sbjct: 129 GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTY 188

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I GLC+    +     + E    +  P V +LN ++   CK G    A  +  +M+ 
Sbjct: 189 NSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH 248

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G+ P+  +YN L+ G C+   ++ A++  + M       + I+Y+ L  G+  +  +  
Sbjct: 249 RGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 308

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  + +++  +   P+ VTY  LI G C +G +++ + L   M+++G   +++ Y  L  
Sbjct: 309 AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 368

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CK+  +D+A+ LL  +E     PD+  Y+ ++ G+C+  ++  A  L++ + SK + P
Sbjct: 369 YLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQP 428

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N + +  ++ GLC++ ++ EA   F  +  + C  +   YN++  G+++       ++L 
Sbjct: 429 NVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELL 488

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL----DTIKLHGLE------------ 410
            +++ +  S  + T   L+     +G     +++L     + +  G +            
Sbjct: 489 EEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSS 548

Query: 411 ------------------------------PSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
                                         PS V +T  + +  +  +   +L+L  +M+
Sbjct: 549 HNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMD 608

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE----------------------DMYVIG 478
           +  I P   T  ++I   C   +L  A  +L                        M   G
Sbjct: 609 SFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKG 668

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           ++PD  TYN++I + C   + +    LLN+M    + P    ++ ++D LC  G +  A 
Sbjct: 669 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 728

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            ++  + +  +    V YT ++  HC   ++ +A+  F  MV KG   ++R Y       
Sbjct: 729 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN------ 782

Query: 599 MLSNGFPPDQEICEVM 614
           +L NG+   Q + + M
Sbjct: 783 ILINGYCQIQRMDKAM 798



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 154/645 (23%), Positives = 268/645 (41%), Gaps = 102/645 (15%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + GMV +A  V+  M    ++ ++ TYN+L+                             
Sbjct: 232 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALM----------------------------- 262

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
              DG C ++ +  A+        K+   +V+S N +++ YCK+   + A  LF  M + 
Sbjct: 263 ---DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 319

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            L P+  +YN LIHGLC  G +++A+   ++M   G  PD +TY  L+        +  A
Sbjct: 320 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKA 379

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             +++ +     DPDI  YT ++ G C+ G +E+   L   + S+G + NV  Y++++  
Sbjct: 380 MALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHG 439

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK G + EA  L  EM   G  P+  TY+++ RG  + ++  + I+L  EM ++  S +
Sbjct: 440 LCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD 499

Query: 308 SFAHGAILLG--------------LCEK-------------------------------- 321
             +   +L+G              LC+                                 
Sbjct: 500 -VSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPH 558

Query: 322 -EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              + +A   F+ ++  +     V +  ++    K+ +    + L  Q+    I P + T
Sbjct: 559 FNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYT 618

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN------------------- 421
            N LI  FC   ++  A  +L  +   G +P  VTY T MN                   
Sbjct: 619 LNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNS 678

Query: 422 ---AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
              A C     + +  LL EM    I P  V ++ V+  LCK+  +  A  +++ M   G
Sbjct: 679 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 738

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           V PD +TY  ++   C   ++ +A ++ + M      P   +YNILI+G C    +  A 
Sbjct: 739 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM 798

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            LL  +    +    V Y T+I   C  G +  A+  F +MV  G
Sbjct: 799 GLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASG 843



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 141/547 (25%), Positives = 232/547 (42%), Gaps = 59/547 (10%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL+ ++       NV+T +I+I GLC+Q  L +A     E       P+  + N I   +
Sbjct: 416 DLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGF 475

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG--------------------- 147
            +   A     L   ML  G   D  +  +L+  L   G                     
Sbjct: 476 LRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGT 535

Query: 148 -------------------------SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
                                    ++++AL   N M      P  + ++ L      + 
Sbjct: 536 QMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMK 595

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
             S    +  ++   G  PD+ T  +LI  +C +  +     +   +L  GF+ +V+ Y 
Sbjct: 596 HYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYG 655

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++ +CK             M   G+ PD+ TY+ LI  LC   +      L NEM + 
Sbjct: 656 TLMNGLCK-------------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 702

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
           +I PN      ++  LC++ MI  A    D +I      DVV Y  ++DG+     + EA
Sbjct: 703 KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEA 762

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           V+++  ++ K   P++ ++N LI G+C+  ++  A  LL+ + L GL    VTY T ++ 
Sbjct: 763 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 822

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C  G +Q  +AL  EM      P  VTY +++  LCK   L EA+ LL+ +    +  D
Sbjct: 823 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 882

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            + YN  I   C+  +L  A  L + +    L+P   TYNI+I GLC  G L  A+ L  
Sbjct: 883 ILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFR 942

Query: 543 SLQEHNI 549
            + E++I
Sbjct: 943 KMDENDI 949



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 150/293 (51%), Gaps = 3/293 (1%)

Query: 19  IAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQ 75
           + KM    +   I TYNSL++   NL     +  L +++  S+   NV   S V+D LC+
Sbjct: 661 LCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 720

Query: 76  QSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFS 135
           +  +  A   +     +   P VV+  A+M  +C     + A  +F  M+  G  P+  S
Sbjct: 721 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 780

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           YNILI+G C    M++A+     M   G+  D +TY+ L  G   + ++  A  +  +++
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
             G  PD+VTY +L+   C+  ++ E + L + +       +++ Y++ +  MC++G ++
Sbjct: 841 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 900

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
            A  L   + + GL+PD+ TY+I+I GLCK+  + +A +L+ +M    I  NS
Sbjct: 901 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNS 953


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 157/581 (27%), Positives = 287/581 (49%), Gaps = 18/581 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAK 118
           +V++ + ++ GLC ++R Q+A+  L   A    G   P VVS N +++ + K G ++ A 
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAY 221

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             +  ML  G+ PD  +Y+ +I  LC A +M++A+E  N M ++GV PD +TY+ +  G+
Sbjct: 222 STYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 281

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               Q   A   ++K+   G +P++VTY+ L+   C+ G   E  K+ + M  +G + ++
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y  LL      G + E   LL  M   G++PD   ++ILI    KQ+KV +A+ ++++
Sbjct: 342 ATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M    ++PN   +G ++  LC+   + +A +YF+ +I      ++++Y  +I G      
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             +A +L  +++++ I  + + FNS+I   CK G+V ++ +L D +   G++P  +TY T
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++  C  G +     LL  M +  + P  VTY  +I G C+  ++ +A+ L ++M   G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           V+P+ ITYN I++     +    A +L   +     +   +TYNI++ GLC N     A 
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 641

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------ 592
            +  +L   ++ L    +  +I A    G + +A   F      G    +R Y+      
Sbjct: 642 RMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENL 701

Query: 593 ---------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
                       F  M  NG   D  +   ++    Q GD+
Sbjct: 702 IEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDI 742



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 160/621 (25%), Positives = 300/621 (48%), Gaps = 43/621 (6%)

Query: 17  FVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLY--DDIKVSETPRNVYTNSIVI 70
            V+ +M EL     + +YN+LL  L    R  + +  L+   D +   +P +V + + V+
Sbjct: 149 IVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +G  ++     A     E   +   P VV+ ++I++  CK    + A  +   M+K G+ 
Sbjct: 209 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 268

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD  +YN ++HG C +G  +EA+     M   GVEP+ +TYS L        + + A K+
Sbjct: 269 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKI 328

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              +  +G +PDI TY  L+ GY   G + E   L ++M+  G + +   +++L+ +  K
Sbjct: 329 FDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAK 388

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             ++D+A+ +  +M   GL P++V Y  +I  LCK   V  A+  + +M  + ++PN   
Sbjct: 389 QEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIV 448

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + +++ GLC  +   +A      ++      + + +N +ID + K G + E+ +L+  ++
Sbjct: 449 YTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 508

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
              + P I+T+N+LI G C  GK+ +A +LL ++   G++P  VTY T +N YC    + 
Sbjct: 509 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 568

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIK---------------------------------- 456
             LAL +EM +  + P  +TY ++++                                  
Sbjct: 569 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 628

Query: 457 -GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLCK     EA+++ +++ +  +  +  T+N +I +  KC  + +A  L      + L 
Sbjct: 629 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 688

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TY+++ + L   G L+  D L +S++E+  S       +I++     GD+ +A T+
Sbjct: 689 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTY 748

Query: 576 FCQMVEKGFEISIRDYTKSFF 596
              + EK F  S+   T SF 
Sbjct: 749 LFMIDEKHF--SLEASTASFL 767



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 162/607 (26%), Positives = 279/607 (45%), Gaps = 23/607 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAK 118
           +  T + ++ GLC   R  DA+ + L+     E G  P V S N ++   C    ++ A 
Sbjct: 126 DAITFTPLLKGLCADKRTSDAMDIVLRRMT--ELGCIPDVFSYNNLLKGLCDENRSQEAL 183

Query: 119 GLFCLMLK---YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            L  +M      G  PD  SYN +++G    G  ++A    ++M   G+ PD +TYS + 
Sbjct: 184 ELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSII 243

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                   +  A +V+  ++  G  PD +TY  ++ GYC  G  +E +   + M S G +
Sbjct: 244 AALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 303

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            NV+ YS L++ +CK+GR  EA  +   M   GL+PD+ TY  L++G   +  + +   L
Sbjct: 304 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHAL 363

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
            + M    I P+      ++    ++E + +A + F  +       +VV Y  +ID   K
Sbjct: 364 LDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 423

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G++ +A+  + Q+I++ ++P+I+ + SLI+G C   K   A  L+  +   G+  + + 
Sbjct: 424 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIF 483

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           + + ++++C+EG +     L   M    + P  +TY  +I G C   K+ EA +LL  M 
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            +GV PD +TY T+I  +C+   +  A  L  +M    + P   TYNI++ GL       
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 603

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF-------CQMVEKGFEISI 588
            A  L VS+ +    L    Y  I+   C      +A+  F        Q+  + F I I
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 663

Query: 589 --------RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                    D  K  F    +NG  PD     +M     + G L  + +L   M ++G  
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723

Query: 641 PDKFLIN 647
            D  ++N
Sbjct: 724 ADSRMLN 730



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 253/564 (44%), Gaps = 61/564 (10%)

Query: 80  QDAILFLQETAGKEFGPSVVSLN------------AIMSRYCKLGFAEVAKGLFCLMLKY 127
           +DA     E   +  G S+  LN            A +SRY ++  A   K         
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGK--------- 87

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            + P   +Y ILI   C AG ++       ++ + G   DAIT++ L KG     + S A
Sbjct: 88  -VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146

Query: 188 WKVIQKLLIK---------------------------------------GSDPDIVTYTV 208
             ++ + + +                                       GS PD+V+Y  
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           ++ G+ + G+ ++       ML +G   +V+ YS +++++CK+  +D+A+ +L  M   G
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           + PD +TY+ ++ G C   +  +AI    +M S  + PN   + +++  LC+    TEAR
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             FDS+       D+  Y  ++ GY   G + E   L   ++   I P    FN LI  +
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            K  KV  A  +   ++ HGL P+ V Y T ++  C+ G++   +   ++M  + + P  
Sbjct: 387 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNI 446

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           + YT +I GLC   K  +A +L+ +M   G+  + I +N+II S CK   + ++ +L + 
Sbjct: 447 IVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 506

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    ++P   TYN LIDG C+ G +  A  LL S+    +    V Y T+I  +C    
Sbjct: 507 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 566

Query: 569 VHKAMTFFCQMVEKGFEISIRDYT 592
           +  A+  F +MV  G   +I  Y 
Sbjct: 567 MDDALALFKEMVSSGVSPNIITYN 590



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 240/544 (44%), Gaps = 71/544 (13%)

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           D+ RH        Y+ +A+        +GA KV          P + TY +LI   C+ G
Sbjct: 64  DVARHSPAAAVSRYNRMAR--------AGAGKVT---------PTVHTYAILIGCCCRAG 106

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL-LYEMEAVGLKPDLVTY 276
            ++ G      ++ +GF+++ I ++ LL  +C   R  +A+ + L  M  +G  PD+ +Y
Sbjct: 107 RLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSY 166

Query: 277 SILIRGLCKQDKVHKAIQL--------------------------------------YNE 298
           + L++GLC +++  +A++L                                      Y+E
Sbjct: 167 NNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHE 226

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  + I P+   + +I+  LC+ + + +A    ++++ +  + D + YN ++ GY   G 
Sbjct: 227 MLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 286

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             EA+   +++    + P++VT++SL+   CKNG+  +AR++ D++   GLEP   TY T
Sbjct: 287 PKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRT 346

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +  Y  +G +  + ALL  M    I P H  + ++I    KQ K+ +A+ +   M   G
Sbjct: 347 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG 406

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           + P+ + Y T+I   CK   +  A     QM    L P    Y  LI GLC       A+
Sbjct: 407 LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAE 466

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI---------- 588
            L++ + +  I L  + + +II +HC EG V ++   F  MV  G +  I          
Sbjct: 467 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGC 526

Query: 589 -----RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                 D        M+S G  PD      ++  + +   +     L   M+ SG+ P+ 
Sbjct: 527 CLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNI 586

Query: 644 FLIN 647
              N
Sbjct: 587 ITYN 590



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 223/466 (47%), Gaps = 5/466 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL----YNLRHTDIMWDLYDDIKVSETPR 61
           Y  +G   +A+  + KM+   ++ ++ TY+SL+     N R T+    ++D +       
Sbjct: 281 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE-ARKIFDSMTKRGLEP 339

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T   ++ G   +  L +    L         P     N ++  Y K    + A  +F
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M ++GL+P+   Y  +I  LC +GS+++A+ +   M   G+ P+ I Y+ L  G    
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A ++I ++L +G   + + +  +I  +C+ G V E  KL ++M+  G K ++I Y
Sbjct: 460 DKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 519

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C +G++DEA  LL  M +VG+KPD+VTY  LI G C+  ++  A+ L+ EM S
Sbjct: 520 NTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 579

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +SPN   +  IL GL        A+  + S+  S    ++  YNI++ G  K     E
Sbjct: 580 SGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDE 639

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+++++ L    +     TFN +I    K G++ +A+ L      +GL P   TY+    
Sbjct: 640 ALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAE 699

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
              E+G+++ L  L   ME             +++ L ++  +  A
Sbjct: 700 NLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 185/379 (48%), Gaps = 5/379 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD--LYDDIKVSE 58
           +L   Y++   V  A+ V +KM++  L  ++  Y +++  L  +  + D  LY +  + E
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE 440

Query: 59  --TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
             TP N+   + +I GLC   +   A   + E   +    + +  N+I+  +CK G    
Sbjct: 441 GLTP-NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 499

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           ++ LF LM++ G+ PD  +YN LI G C+AG M+EA +    M   GV+PD +TY  L  
Sbjct: 500 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 559

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+  +S++  A  + ++++  G  P+I+TY +++ G           +L   +   G +L
Sbjct: 560 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 619

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +  Y+++L  +CK+   DEAL +   +    L+ +  T++I+I  L K  ++ +A  L+
Sbjct: 620 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLF 679

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
               +  + P+   +  +   L E+  + E    F S+  + C  D  + N ++   ++ 
Sbjct: 680 AAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQR 739

Query: 357 GNIGEAVQLYRQLIEKRIS 375
           G+I  A      + EK  S
Sbjct: 740 GDITRAGTYLFMIDEKHFS 758


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 258/491 (52%)

Query: 93  EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           +F  SV S N ++    +    +  K ++  ML   + P+ ++ N +++     G++ EA
Sbjct: 174 KFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEA 233

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
             + + + + G+ PD+ TY+ L  G+   + ++ A+KV   +  KG   + V+YT +I G
Sbjct: 234 NLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHG 293

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            C+ G ++EG+ L + M        V  Y+V++ ++  + R  E + L  EM     +P+
Sbjct: 294 LCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPN 353

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           + TY++++  +CK+ K+ ++ ++ NEM  K + P+   + A++ G CE+  I  A     
Sbjct: 354 VHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILG 413

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +  +NC  +   YN +I G+ K  ++ +A+ L  +++E +++PS+VT+NSLI+  CK G
Sbjct: 414 LMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAG 473

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
               A +LLD +K +GL P   TY+ F++  C+   ++    L   ++ K I    V YT
Sbjct: 474 HFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYT 533

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I G CK  K+ EA+ LLE M+     P+  TYN++I   CK   +++   ++  M   
Sbjct: 534 ALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKM 593

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            ++PT ATY ILI+ +   GD  +A+ +   +           YT  I  +C  G+V +A
Sbjct: 594 GVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEA 653

Query: 573 MTFFCQMVEKG 583
                +M+E G
Sbjct: 654 EGMMARMIEAG 664



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 248/494 (50%), Gaps = 4/494 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P++ +LN +++ Y K+G    A      + + GL PD+F+Y  LI G C    +  A + 
Sbjct: 212 PNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKV 271

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            N M   G   + ++Y+ +  G     +I     + +K+      P + TYTV+I  +  
Sbjct: 272 FNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVII--HAL 329

Query: 216 IGNVE--EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
            GN    EG+ L   M  +  + NV  Y+V++ +MCK  ++DE+  +L EM   GL P +
Sbjct: 330 FGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSV 389

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VTY+ LIRG C++ ++  A+++   M S    PN   +  ++ G  +++ + +A      
Sbjct: 390 VTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSK 449

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++ S     +V YN +I    K G+   A +L   L E  + P   T++  I   CK+ +
Sbjct: 450 MLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKR 509

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + +A  L +++K  G++ + V YT  ++ +C+ G I   ++LL+ M ++   P   TY  
Sbjct: 510 MEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNS 569

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I G+CK+ K+QE + ++E+M  +GV P   TY  +I    +  D   A ++ NQM    
Sbjct: 570 LIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFG 629

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
            +P   TY   I   C +G++K A+ ++  + E  +    + YT +I A+   G  + A 
Sbjct: 630 HKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAF 689

Query: 574 TFFCQMVEKGFEIS 587
               +M++ G + S
Sbjct: 690 NVLKRMLDAGCDPS 703



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 240/508 (47%), Gaps = 20/508 (3%)

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           SYN L+  L     ++E      +M    + P+  T + +   +  +  I  A   + K+
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
              G  PD  TYT LI GYC+  +V    K+  +M ++G + N ++Y+ ++  +C++GRI
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           DE + L  +M      P + TY+++I  L   D+  + + L+NEM  +   PN   +  +
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVM 360

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           +  +C++  + E+R   + ++    +  VV YN +I GY + G I  A+++   +     
Sbjct: 361 VDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNC 420

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P+  T+N LI GF K   V  A  LL  +    L PS VTY + ++  C+ G+      
Sbjct: 421 RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYK 480

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           LL  ++   + P   TY+V I  LCK  +++EA  L   +   G+  +++ Y  +I   C
Sbjct: 481 LLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHC 540

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K   + +A  LL +M   +  P S+TYN LI G+C  G ++    ++ ++ +  +  T  
Sbjct: 541 KAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVA 600

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
            YT +I+    EGD   A   F QMV  G +  +  YT                      
Sbjct: 601 TYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYT--------------------AF 640

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +  +   G++     + A MI++G++PD
Sbjct: 641 IHTYCTSGNVKEAEGMMARMIEAGVMPD 668



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 233/491 (47%), Gaps = 7/491 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPR 61
            YS+ G + +A   ++K+ +  L     TY SL+    R+ D+   + +++ +      R
Sbjct: 223 AYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRR 282

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG-- 119
           N  + + +I GLC+  R+ + I   ++    +  P+V +   I+  +   G     +G  
Sbjct: 283 NEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVII--HALFGNDRNLEGMD 340

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  M +    P+  +Y +++  +C    ++E+    N+M   G+ P  +TY+ L +G+ 
Sbjct: 341 LFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYC 400

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +I  A +++  +      P+  TY  LICG+ +  +V + + L   ML      +++
Sbjct: 401 EEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLV 460

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L+   CK+G  D A  LL  ++  GL PD  TYS+ I  LCK  ++ +A  L+N +
Sbjct: 461 TYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSL 520

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K I  N   + A++ G C+   I EA    + +   +C+ +   YN +I G  K G +
Sbjct: 521 KEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKV 580

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            E + +   + +  + P++ T+  LI    + G    A R+ + +   G +P   TYT F
Sbjct: 581 QEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAF 640

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ YC  GN++    ++  M    + P  +TYT++I    +     +A  +L+ M   G 
Sbjct: 641 IHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGC 700

Query: 480 TPDQITYNTII 490
            P    +N +I
Sbjct: 701 DPSHPIWNNLI 711



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 159/336 (47%), Gaps = 22/336 (6%)

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
           ++  +L+ L    MI E +  +  ++    + ++   N M++ Y K+GNI EA     ++
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            +  +SP   T+ SLI G+C+N  V  A ++ + +   G   + V+YTT ++  CE G I
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
              ++L ++M      PT  TYTV+I  L    +  E + L  +M      P+  TY  +
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVM 360

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           + + CK + L ++ ++LN+M    L P+  TYN LI G C  G ++ A  +L  ++ +N 
Sbjct: 361 VDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNC 420

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
              +  Y  +I        VHKAMT   +M+E     S+  Y                  
Sbjct: 421 RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNS---------------- 464

Query: 610 ICEVMLIAFH-QGGDLGSVFELAAVMIKSGLLPDKF 644
                LI    + G   S ++L  ++ ++GL+PD++
Sbjct: 465 -----LIHVQCKAGHFDSAYKLLDLLKENGLVPDQW 495



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 126/294 (42%), Gaps = 17/294 (5%)

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           Q+ R   + +   S+ ++N L+    +   + + +R+   +    + P+  T  T +NAY
Sbjct: 165 QMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAY 224

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            + GNI      + ++    + P   TYT +I G C+   +  A ++   M   G   ++
Sbjct: 225 SKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNE 284

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG-DLKNADCLLV 542
           ++Y TII   C+   + +   L  +M   +  PT  TY ++I  L  N  +L+  D L  
Sbjct: 285 VSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMD-LFN 343

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF--FC--- 597
            ++E +       YT ++ A C E  + ++     +M+EKG   S+  Y      +C   
Sbjct: 344 EMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEG 403

Query: 598 ----------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                     +M SN   P++     ++  F +   +     L + M++S L P
Sbjct: 404 RIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTP 457


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 239/451 (52%), Gaps = 8/451 (1%)

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           +P  V   + +I  LC   R  DA   L  +     GP V+  NA+++ YC  G  + A+
Sbjct: 100 SPAAVGPCAALIKKLCASGRTADARRVLAAS-----GPDVMVYNAMVAGYCGAGQLDAAR 154

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M    + PDA++YN LI GLC  G    AL    DM R G  PD +TY+IL +  
Sbjct: 155 RLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEAT 211

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
              S    A K++ ++  KG  PDIVTY V++ G CQ G VE+ ++  + + S G + N 
Sbjct: 212 CKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNT 271

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           ++Y+++L  +  + R ++A  L+ EM   G  P++VT+++LI  LC++  V  A+++  +
Sbjct: 272 VSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQ 331

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M     +PNS ++  +L   C+++ I +A  + + ++   C  D+V YN ++    + G 
Sbjct: 332 MPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGE 391

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +  A++L  QL +K  SP ++++N++I G  K GK  +A  LLD +   GL+P  +TY+T
Sbjct: 392 VDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYST 451

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
             +  C E  I+  +    +++   I PT   Y  ++ GLCK+ +   A+ L   M   G
Sbjct: 452 IASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSG 511

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
             P++ TY  ++        +++A +L  Q+
Sbjct: 512 CMPNESTYTILVEGLAYEGLVKEARELFAQL 542



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/508 (27%), Positives = 252/508 (49%), Gaps = 13/508 (2%)

Query: 59  TPRNVYTNSIVIDGL---CQQSRLQDAILFLQETAG-KEFGPSVV-SLNAIMSRYCKLGF 113
           TPR   +++   + L    ++  L DA+  +   AG     P+ V    A++ + C  G 
Sbjct: 60  TPRRKASSASATERLRVLVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGR 119

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A+ +          PD   YN ++ G C AG ++ A     DM    VEPDA TY+ 
Sbjct: 120 TADARRVLA-----ASGPDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNT 171

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L +G     + S A  V++ +  +G  PD+VTYT+L+   C+    ++ +KL + M  +G
Sbjct: 172 LIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKG 231

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              +++ Y+V+L+ +C+ GR+++A+  L  + + G +P+ V+Y+I+++GL   ++   A 
Sbjct: 232 CAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAE 291

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           +L  EM  K   PN      ++  LC + ++  A    + +    C  + + YN ++  +
Sbjct: 292 KLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAF 351

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K   I +A++    ++ +   P IV++N+L+   C+NG+V  A  LL  +K  G  P  
Sbjct: 352 CKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVL 411

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           ++Y T ++   + G  +  L LL EM +K + P  +TY+ +  GLC++ +++EAV+    
Sbjct: 412 ISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCK 471

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           +  +G+ P    YN I+   CK ++   A  L   M      P  +TY IL++GL   G 
Sbjct: 472 VQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGL 531

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIK 561
           +K A  L   L    +   K+     IK
Sbjct: 532 VKEARELFAQLCSRGVVNKKLMKKGSIK 559



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 229/460 (49%), Gaps = 12/460 (2%)

Query: 128 GLHPDAFSY----NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           GL+P + +       LI  LC +G   +A       G     PD + Y+ +  G+    Q
Sbjct: 95  GLNPPSPAAVGPCAALIKKLCASGRTADARRVLAASG-----PDVMVYNAMVAGYCGAGQ 149

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A +++  + +   +PD  TY  LI G C  G     L + E M  +G   +V+ Y++
Sbjct: 150 LDAARRLVADMPV---EPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTI 206

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           LL + CK     +A+ LL EM   G  PD+VTY++++ G+C++ +V  A++    + S  
Sbjct: 207 LLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYG 266

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN+ ++  +L GL   E   +A    + +    C  +VV +N++I    + G +  A+
Sbjct: 267 CEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAM 326

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           ++  Q+ +   +P+ +++N L++ FCK  K+  A   ++ +   G  P  V+Y T + A 
Sbjct: 327 EVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTAL 386

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C  G +   + LL +++ K   P  ++Y  VI GL K  K +EA++LL++M   G+ PD 
Sbjct: 387 CRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDI 446

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           ITY+TI    C+   + +A +   ++    + PT+A YN ++ GLC   +  NA  L   
Sbjct: 447 ITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAY 506

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +        +  YT +++    EG V +A   F Q+  +G
Sbjct: 507 MISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG 546



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 222/448 (49%), Gaps = 10/448 (2%)

Query: 147 GSMEEALEFTNDM-GRHGVEPDAI-TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
           G +++AL   + + G +   P A+   + L K      + + A +V+       S PD++
Sbjct: 81  GELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVLA-----ASGPDVM 135

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            Y  ++ GYC  G ++     R ++     + +   Y+ L+  +C  GR   AL +L +M
Sbjct: 136 VYNAMVAGYCGAGQLDAA---RRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDM 192

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              G  PD+VTY+IL+   CK+    +A++L +EM  K  +P+   +  +L G+C++  +
Sbjct: 193 FRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRV 252

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            +A  +  +L    C  + V YNI++ G        +A +L  ++  K   P++VTFN L
Sbjct: 253 EDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNML 312

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I   C+ G V  A  +L+ +  +G  P++++Y   ++A+C++  I + +  ++ M ++  
Sbjct: 313 ISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGC 372

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  V+Y  ++  LC+  ++  A++LL  +   G +P  I+YNT+I    K    ++A +
Sbjct: 373 YPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALE 432

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           LL++M    L+P   TY+ +  GLC    ++ A      +Q+  I  T   Y  I+   C
Sbjct: 433 LLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLC 492

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYT 592
              + H A+  F  M+  G   +   YT
Sbjct: 493 KRRETHNAIDLFAYMISSGCMPNESTYT 520



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 181/325 (55%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L D++       ++ T ++V++G+CQ+ R++DA+ FL+        P+ VS N ++    
Sbjct: 223 LLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLF 282

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
                E A+ L   M   G  P+  ++N+LI  LC  G +E A+E    M ++G  P+++
Sbjct: 283 TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSL 342

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+ L   F    +I  A + ++ ++ +G  PDIV+Y  L+   C+ G V+  ++L   +
Sbjct: 343 SYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQL 402

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
             +G    +I+Y+ ++  + K+G+  EAL LL EM + GL+PD++TYS +  GLC++D++
Sbjct: 403 KDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRI 462

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A++ + ++    I P +  + AILLGLC++     A   F  +I S C+ +   Y I+
Sbjct: 463 EEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTIL 522

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRI 374
           ++G    G + EA +L+ QL  + +
Sbjct: 523 VEGLAYEGLVKEARELFAQLCSRGV 547



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 146/299 (48%), Gaps = 5/299 (1%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVYT 65
           G V DA+  +  +     + +  +YN +L  L  T   W+    L +++     P NV T
Sbjct: 250 GRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGL-FTAERWEDAEKLMEEMAHKGCPPNVVT 308

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            +++I  LC++  ++ A+  L++       P+ +S N ++  +CK      A     LM+
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G +PD  SYN L+  LC  G ++ A+E  + +   G  P  I+Y+ +  G     +  
Sbjct: 369 SRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTK 428

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A +++ ++  KG  PDI+TY+ +  G C+   +EE ++    +   G +     Y+ +L
Sbjct: 429 EALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAIL 488

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
             +CK      A+ L   M + G  P+  TY+IL+ GL  +  V +A +L+ ++CS+ +
Sbjct: 489 LGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 32/269 (11%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           ML     R G+V  A+ V+ +M +     +  +YN LL+                     
Sbjct: 311 MLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLH--------------------- 349

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
                        C+Q ++  A+ F++    +   P +VS N +++  C+ G  +VA  L
Sbjct: 350 -----------AFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIEL 398

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              +   G  P   SYN +I GL  AG  +EALE  ++M   G++PD ITYS +A G   
Sbjct: 399 LHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCR 458

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +I  A +   K+   G  P    Y  ++ G C+       + L   M+S G   N   
Sbjct: 459 EDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNEST 518

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           Y++L+  +   G + EA  L  ++ + G+
Sbjct: 519 YTILVEGLAYEGLVKEARELFAQLCSRGV 547


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 254/497 (51%), Gaps = 11/497 (2%)

Query: 56  VSETPRNVYTNSIVID---GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
           V+ +P  V   ++  D   GL ++  L++A+  ++  +G E   +     A++ + C  G
Sbjct: 49  VAASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASG 108

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
               A+ +          PD  +YN ++ G C+ G ++ A     DM    +EPD+ TY+
Sbjct: 109 RTAEARRVLA-----ACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYN 160

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L +G     +   A  V+  +L +G  PD+VTYT+L+   C+    ++ +KL + M ++
Sbjct: 161 TLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAK 220

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   ++I Y+V+++ +C+ GR+D+A+  L  + + G +P+ V+Y+I+++GLC  ++   A
Sbjct: 221 GCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDA 280

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            +L  EM  K   PN      ++  LC + ++  A    D +    C  + + YN ++  
Sbjct: 281 EKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHA 340

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           + K   +  A+     ++ +   P IV++N+L+   C+ G+V  A  LL  +K  G  P 
Sbjct: 341 FCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPV 400

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            ++Y T ++   + G  +  L LL EM TK + P  +TY+ +  GLC++ +++EA++   
Sbjct: 401 LISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFC 460

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            +  +G+ P+ + YN I+   CK ++   A  L   M  +   P  +TY ILI+GL   G
Sbjct: 461 KVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEG 520

Query: 533 DLKNADCLLVSLQEHNI 549
            +K A  LL  L    +
Sbjct: 521 LVKEARELLGELCSRGV 537



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 234/467 (50%), Gaps = 14/467 (2%)

Query: 131 PDAFSY----NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           P+A  +    N  + GL   G +EEAL     M   G+EP A      A    L+ ++  
Sbjct: 53  PNAVPHRAVSNDRLRGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAA----LIKKLCA 106

Query: 187 AWKVIQ-KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
           + +  + + ++   +PD++ Y  ++ GYC  G ++     R ++     + +   Y+ L+
Sbjct: 107 SGRTAEARRVLAACEPDVMAYNAMVAGYCVTGQLDAA---RRLVADMPMEPDSYTYNTLI 163

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +C  GR   AL +L +M   G  PD+VTY+IL+   CK+    +A++L +EM +K  +
Sbjct: 164 RGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCA 223

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+   +  ++ G+C++  + +A  +  SL    C  + V YNI++ G        +A +L
Sbjct: 224 PDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKL 283

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++ +K   P++VTFN LI   C+ G V  A  +LD I  +G  P++++Y   ++A+C+
Sbjct: 284 MAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCK 343

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +  + R +A ++ M ++   P  V+Y  ++  LC+  ++  AV+LL  +   G TP  I+
Sbjct: 344 QKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLIS 403

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YNT+I    K    ++A +LLN+M    L+P   TY+ +  GLC    ++ A      +Q
Sbjct: 404 YNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQ 463

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +  I    V Y  I+   C   + H A+  F  M+  G   +   YT
Sbjct: 464 DMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYT 510



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 227/458 (49%), Gaps = 10/458 (2%)

Query: 128 GLHPDAFSYN--ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           GL P A       LI  LC +G   EA            EPD + Y+ +  G+ +  Q+ 
Sbjct: 87  GLEPSAAPGPCAALIKKLCASGRTAEARRVL-----AACEPDVMAYNAMVAGYCVTGQLD 141

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A +++  + +   +PD  TY  LI G C  G     L + + ML +G   +V+ Y++LL
Sbjct: 142 AARRLVADMPM---EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILL 198

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
            + CK     +A+ LL EM A G  PD++TY++++ G+C++ +V  AI+    + S    
Sbjct: 199 EATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCE 258

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN+ ++  +L GLC  E   +A      +       +VV +N++I    + G +  A+++
Sbjct: 259 PNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEV 318

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             Q+ +   +P+ +++N +++ FCK  K+  A   ++ +   G  P  V+Y T + A C 
Sbjct: 319 LDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCR 378

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G +   + LL +++ K   P  ++Y  VI GL K  K +EA++LL +M   G+ PD IT
Sbjct: 379 GGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIIT 438

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           Y+TI    C+   + +A +   ++    + P +  YN ++ GLC   +  NA  L + + 
Sbjct: 439 YSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMI 498

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +     +  YT +I+    EG V +A     ++  +G
Sbjct: 499 SNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRG 536



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 212/460 (46%), Gaps = 43/460 (9%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I  LC   R  +A   L         P V++ NA+++ YC  G  + A+ L   M  
Sbjct: 98  AALIKKLCASGRTAEARRVLAACE-----PDVMAYNAMVAGYCVTGQLDAARRLVADM-- 150

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV---------------------- 164
             + PD+++YN LI GLC  G    AL   +DM R G                       
Sbjct: 151 -PMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQ 209

Query: 165 -------------EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
                         PD ITY+++  G     ++  A + ++ L   G +P+ V+Y +++ 
Sbjct: 210 AMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLK 269

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           G C     E+  KL   M  +G+  NV+ +++L+S +C+ G ++ A+ +L ++   G  P
Sbjct: 270 GLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTP 329

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           + ++Y+ ++   CKQ K+ +A+     M S+   P+  ++  +L  LC    +  A    
Sbjct: 330 NSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELL 389

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             L    C   ++ YN +IDG  K G   EA++L  +++ K + P I+T++++  G C+ 
Sbjct: 390 HQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCRE 449

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
            ++ +A R    ++  G+ P+ V Y   +   C+       + L   M +    P   TY
Sbjct: 450 DRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTY 509

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
           T++I+GL  +  ++EA +LL ++   GV    +     IR
Sbjct: 510 TILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAIR 549



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 182/325 (56%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L D+++      ++ T ++V++G+CQ+ R+ DAI FL+        P+ VS N ++   C
Sbjct: 213 LLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLC 272

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
                E A+ L   M + G  P+  ++N+LI  LC  G +E A+E  + + ++G  P+++
Sbjct: 273 TAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSL 332

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+ +   F    ++  A   ++ ++ +G  PDIV+Y  L+   C+ G V+  ++L   +
Sbjct: 333 SYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 392

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
             +G    +I+Y+ ++  + K+G+  EAL LL EM   GL+PD++TYS +  GLC++D++
Sbjct: 393 KDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRI 452

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +AI+ + ++    I PN+  + AILLGLC++     A   F  +I + C+ +   Y I+
Sbjct: 453 EEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTIL 512

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRI 374
           I+G    G + EA +L  +L  + +
Sbjct: 513 IEGLTYEGLVKEARELLGELCSRGV 537



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 127/261 (48%), Gaps = 5/261 (1%)

Query: 13  HDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDI-KVSETPRNVYTNSI 68
            DA  ++A+M +     ++ T+N L+  L    ++    ++ D I K   TP ++  N I
Sbjct: 278 EDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPI 337

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
            +   C+Q ++  A+ F++    +   P +VS N +++  C+ G  + A  L   +   G
Sbjct: 338 -LHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 396

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P   SYN +I GL  AG  +EALE  N+M   G++PD ITYS ++ G     +I  A 
Sbjct: 397 CTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAI 456

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +   K+   G  P+ V Y  ++ G C+       + L   M+S G   N   Y++L+  +
Sbjct: 457 RAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGL 516

Query: 249 CKSGRIDEALGLLYEMEAVGL 269
              G + EA  LL E+ + G+
Sbjct: 517 TYEGLVKEARELLGELCSRGV 537


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 249/480 (51%), Gaps = 26/480 (5%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  +L+    P A  +N ++  L  +      L  +  M   G+ P      +L  
Sbjct: 60  AFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINP------VL-- 111

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            FH        ++   +L+  G  P+ +T+T LI G C  G + + L   + +++ GF+L
Sbjct: 112 -FH--------FQHPHQLM--GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQL 160

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + + Y  L+  +CK G    AL LL  ++   ++P++V YS +I G+CK   V+ A  LY
Sbjct: 161 DQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLY 220

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           +EM SK ISPN   + A++ G      + +A   F+ +I+ N   DV  +NI++DG+ K 
Sbjct: 221 SEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKD 280

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G + E   ++  ++++ I P++VT+ SL+ G+C   +V  A+ +L T+   G+ P   +Y
Sbjct: 281 GKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSY 340

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              ++ +C+   +   + L +EM  K I P  VTY  +I GLCK  K+  A++L+++M+ 
Sbjct: 341 NILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHD 400

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            GV PD ITY++I+ + CK   + KA  LL ++    + P   TY ILIDGLC  G L++
Sbjct: 401 RGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLED 460

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIR 589
           A  +   L     ++T   YT +I   C +G   +A+    +M +         +EI IR
Sbjct: 461 AHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIR 520



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 261/504 (51%), Gaps = 21/504 (4%)

Query: 41  LRHTDIMWDLYDDIKVSETP-----RNVYTNSIVIDGLCQQSRL------QDAILFLQET 89
           L++T   +  Y   K++  P        + N+ V+D     SRL        AI F    
Sbjct: 24  LKNTHFNFIPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEF---- 79

Query: 90  AGKEFGPSVVS--LNAIMSRYCKLGFAEVAKGLFCLMLKY---GLHPDAFSYNILIHGLC 144
             K  G  V S   + ++S   ++ F  +   LF     +   G HP+  ++  LI GLC
Sbjct: 80  -NKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLC 138

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
           + G + +AL F +++   G + D + Y  L  G   + +   A  +++++      P++V
Sbjct: 139 LKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVV 198

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            Y+ +I G C+  +V +   L   M+S+G   NV+ YS L+S     G++ +A+ L  +M
Sbjct: 199 MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKM 258

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
               +KPD+ T++IL+ G CK  K+ +   ++  M  + I PN   + +++ G C  + +
Sbjct: 259 ILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEV 318

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            +A+    ++       D+  YNI+IDG+ K+  + EA+ L++++  K I P +VT+NSL
Sbjct: 319 NKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSL 378

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G CK GK++ A +L+D +   G+ P  +TY++ ++A C+   + + +ALL +++ + I
Sbjct: 379 IDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGI 438

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P   TYT++I GLCK  +L++A  + ED+ V G      TY  +I  FC      +A  
Sbjct: 439 RPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALA 498

Query: 505 LLNQMWLHNLEPTSATYNILIDGL 528
           LL++M  ++  P + TY I+I  L
Sbjct: 499 LLSKMKDNSCIPDAVTYEIIIRSL 522



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 218/444 (49%), Gaps = 35/444 (7%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T + +I GLC + ++  A+LF        F    V    ++   CK+G    A  L 
Sbjct: 126 NTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLL 185

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +    + P+   Y+ +I G+C    + +A +  ++M   G+ P+ +TYS L  GF  +
Sbjct: 186 RRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTV 245

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            Q+  A  +  K++++   PD+ T+ +L+ G+C+ G ++EG  +  +M+ QG K NV+ Y
Sbjct: 246 GQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTY 305

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
             L+   C    +++A  +LY M   G+ PD+ +Y+ILI G CK  KV +A+ L+ EM  
Sbjct: 306 CSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHH 365

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K I P+   + +++ GLC                                   KLG I  
Sbjct: 366 KHIIPDVVTYNSLIDGLC-----------------------------------KLGKISY 390

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A++L  ++ ++ + P I+T++S++   CKN +V  A  LL  +K  G+ P+  TYT  ++
Sbjct: 391 ALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILID 450

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+ G ++    + +++  K    T  TYTV+I G C +    EA+ LL  M      P
Sbjct: 451 GLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIP 510

Query: 482 DQITYNTIIRSFCKCKDLRKAFQL 505
           D +TY  IIRS     +  KA +L
Sbjct: 511 DAVTYEIIIRSLFDKDENDKAEKL 534



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 219/440 (49%), Gaps = 16/440 (3%)

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           I YS ++  FH  + +  A+ +  +LL +   P  + +  ++    +  +    L L + 
Sbjct: 42  IPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQ 101

Query: 229 MLSQG----------------FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           M  +G                +  N I ++ L+  +C  G+I +AL     + A+G + D
Sbjct: 102 MEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLD 161

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
            V Y  LI GLCK  +   A+ L   +    + PN   +  I+ G+C+ + + +A   + 
Sbjct: 162 QVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYS 221

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            ++      +VV Y+ +I G+  +G + +A+ L+ ++I + I P + TFN L+ GFCK+G
Sbjct: 222 EMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDG 281

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           K+ + + +   +   G++P+ VTY + M+ YC    + +  ++L  M  + + P   +Y 
Sbjct: 282 KMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYN 341

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
           ++I G CK  K+ EA+ L ++M+   + PD +TYN++I   CK   +  A +L+++M   
Sbjct: 342 ILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDR 401

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            + P   TY+ ++D LC N  +  A  LL  L++  I      YT +I   C  G +  A
Sbjct: 402 GVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDA 461

Query: 573 MTFFCQMVEKGFEISIRDYT 592
              F  ++ KG+ I++  YT
Sbjct: 462 HNIFEDLLVKGYNITVNTYT 481



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 204/398 (51%), Gaps = 3/398 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G +H A+     +  +  ++    Y +L++ L     T    DL   +  +    NV   
Sbjct: 141 GQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMY 200

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S +IDG+C+   + DA     E   K   P+VV+ +A++S +  +G  + A  LF  M+ 
Sbjct: 201 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMIL 260

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + PD +++NIL+ G C  G M+E       M + G++P+ +TY  L  G+ L+ +++ 
Sbjct: 261 ENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNK 320

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  ++  +  +G +PDI +Y +LI G+C+I  V+E + L + M  +    +V+ Y+ L+ 
Sbjct: 321 AKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLID 380

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CK G+I  AL L+ EM   G+ PD++TYS ++  LCK  +V KAI L  ++  + I P
Sbjct: 381 GLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRP 440

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N + +  ++ GLC+   + +A   F+ L++      V  Y +MI G+   G   EA+ L 
Sbjct: 441 NMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALL 500

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            ++ +    P  VT+  +I       +   A +L + I
Sbjct: 501 SKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMI 538



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 145/335 (43%), Gaps = 36/335 (10%)

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP------- 376
           + +A   F  L+  N     + +N ++   VK  +    + L +Q+  + I+P       
Sbjct: 57  VVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQH 116

Query: 377 ---------SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
                    + +TF +LI G C  G++  A    D +   G +   V Y T ++  C+ G
Sbjct: 117 PHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVG 176

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
             +  L LL+ ++   + P  V Y+ +I G+CK   + +A  L  +M   G++P+ +TY+
Sbjct: 177 ETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 236

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            +I  F     L+ A  L N+M L N++P   T+NIL+DG C +G +K    +   + + 
Sbjct: 237 ALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQ 296

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
            I    V Y +++  +C   +V+KA                    KS    M   G  PD
Sbjct: 297 GIKPNVVTYCSLMDGYCLVKEVNKA--------------------KSILYTMSQRGVNPD 336

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            +   +++  F +   +     L   M    ++PD
Sbjct: 337 IQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPD 371



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 115/262 (43%), Gaps = 31/262 (11%)

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           + + ++S+   F  N  V DA  L   +      P A+ +   + +  +  +   +L+L 
Sbjct: 40  NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99

Query: 437 QEMETKAIG----------------PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           Q+ME + I                 P  +T+T +IKGLC + ++ +A+   +++  +G  
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            DQ+ Y T+I   CK  + R A  LL ++  + ++P    Y+ +IDG+C +  + +A  L
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
              +    IS   V Y+ +I      G +  A+  F +M+ +  +  +  +         
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279

Query: 593 -------KSFFCMMLSNGFPPD 607
                  K+ F MM+  G  P+
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPN 301


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 258/500 (51%), Gaps = 1/500 (0%)

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           F   ++    I++  CK G+ E A+   C +LK G   D+     L+ G C   ++ +AL
Sbjct: 191 FVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDAL 250

Query: 154 EFTNDMGRHGV-EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           +  + M R G   P++++YSIL  G   + ++  A+ +  ++  KG  P   TYTVLI  
Sbjct: 251 KVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKA 310

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            C  G +++   L + M+++G K NV  Y+VL+  +C+ G+I+EA G+  +M   G+ P 
Sbjct: 311 LCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPS 370

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           ++TY+ LI G CK  +V  A +L   M  +   PN      ++ GLC      +A     
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            ++ +    D+V YN++IDG  + G++  A +L   +    + P  +TF ++I  FCK G
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQG 490

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           K   A   L  +   G+    VT TT ++  C  G  +  L +L+ +    +  T  +  
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLN 550

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
           V++  L K  KL+E + +L  +  +G+ P  +TY T++    +  D+  +F++L  M L 
Sbjct: 551 VILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLS 610

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
              P    Y I+I+GLC  G ++ A+ LL ++Q+  +S   V YT ++K +   G + +A
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670

Query: 573 MTFFCQMVEKGFEISIRDYT 592
           +     MVE+G+E++ R Y+
Sbjct: 671 LETVRAMVERGYELNDRIYS 690



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 143/568 (25%), Positives = 270/568 (47%), Gaps = 30/568 (5%)

Query: 40  NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVV 99
           NLR    ++DL    +      N  + SI+I GLC+  RL++A     +   K   PS  
Sbjct: 245 NLRDALKVFDLMS--REGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           +   ++   C  G  + A  LF  M+  G  P+  +Y +LI GLC  G +EEA      M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
            + G+ P  ITY+ L  G+    ++  A++++  +  +   P++ T+  L+ G C++G  
Sbjct: 363 VKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            + + L + ML  G   ++++Y+VL+  +C+ G ++ A  LL  M +  L+PD +T++ +
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAI 482

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I   CKQ K   A      M  K IS +      ++ G+C      +A    ++L+    
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRM 542

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           +      N+++D   K   + E + +  ++ +  + PS+VT+ +L+ G  ++G ++ + R
Sbjct: 543 LTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFR 602

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           +L+ +KL G  P+   YT  +N  C+ G ++    LL  M+   + P HVTYTV++KG  
Sbjct: 603 MLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP--- 516
              KL  A++ +  M   G   +   Y++++R F           +L+Q  +   +P   
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRIYSSLLRGF-----------VLSQKGIRETDPECI 711

Query: 517 -------------TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
                        TS     L+  LC  G    ++ L+ ++ +  + L K A   I++++
Sbjct: 712 KELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEK-AIDIIMESY 770

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           C++    K +     +++ GF  S + +
Sbjct: 771 CSKKKHTKCVELITLVLKSGFVPSFKSF 798



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 205/452 (45%), Gaps = 56/452 (12%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL------------------- 269
           M + GF + +I Y  +++++CK+G  + A   + ++  VG                    
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLN 245

Query: 270 -----------------KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
                             P+ V+YSILI GLC+  ++ +A  L ++M  K   P++  + 
Sbjct: 246 LRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC++ +I +A   FD +I   C  +V  Y ++IDG  + G I EA  + R++++ 
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            I PS++T+N+LI G+CK+G+V  A  LL  ++    +P+  T+   M   C  G   + 
Sbjct: 366 GIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           + LL+ M    + P  V+Y V+I GLC++  +  A +LL  M    + PD +T+  II +
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINA 485

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
           FCK      A   L  M    +     T   LIDG+C  G  ++A  +L +L +  +  T
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTT 545

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE 612
             +   I+        + + +    ++ + G   S+  YT                    
Sbjct: 546 PHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYT-------------------- 585

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
            ++    + GD+   F +  +M  SG LP+ +
Sbjct: 586 TLVDGLIRSGDISGSFRMLELMKLSGCLPNVY 617



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 185/400 (46%), Gaps = 29/400 (7%)

Query: 202 DIVTYTVLICGYCQIGNVEEGLKL-------REVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           D++   +  C  C+    +E LKL       REV    GF+LN   YS LL S+ K   +
Sbjct: 124 DVIVALIRECSRCE----KEMLKLISCFDELREV---SGFRLNYPCYSSLLMSLAK---L 173

Query: 255 DEALGLL-----YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           D  LG L       MEA G    ++ Y  ++  LCK      A     ++       +S 
Sbjct: 174 D--LGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSH 231

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMS---NCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
              ++LLG C    + +A   FD  +MS    C  + V Y+I+I G  ++G + EA  L 
Sbjct: 232 IVTSLLLGFCRGLNLRDALKVFD--LMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLK 289

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            Q+ EK   PS  T+  LI   C  G +  A  L D +   G +P+  TYT  ++  C +
Sbjct: 290 DQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRD 349

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G I+    + ++M    I P+ +TY  +I G CK  ++  A +LL  M      P+  T+
Sbjct: 350 GKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTF 409

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           N ++   C+     KA  LL +M  + L P   +YN+LIDGLC  G +  A  LL S+  
Sbjct: 410 NELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNS 469

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
            ++    + +T II A C +G    A  F   M+ KG  +
Sbjct: 470 FDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 146/340 (42%), Gaps = 16/340 (4%)

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           CEKEM+     + +   +S    +   Y+ ++    KL     A   YR++        +
Sbjct: 136 CEKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGM 195

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           + + +++   CKNG    A   +  I   G    +   T+ +  +C   N++  L +   
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDL 255

Query: 439 METKAI-GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           M  +    P  V+Y+++I GLC+  +L+EA  L + M   G  P   TY  +I++ C   
Sbjct: 256 MSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            + KAF L ++M     +P   TY +LIDGLC +G ++ A+ +   + +  I  + + Y 
Sbjct: 316 LIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYN 375

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSN 602
            +I  +C +G V  A      M ++  + ++R + +                    ML N
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           G  PD     V++    + G +   ++L   M    L PD
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPD 475


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 269/564 (47%), Gaps = 63/564 (11%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           VI+G CQ  R++DA   L E        ++   N +++ YCKLG    A  +   M   G
Sbjct: 355 VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVG 414

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + PD +SYN L+ G C  G M +A E  N M R+G     +TY+ L KGF  L  I  A 
Sbjct: 415 VRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDAL 474

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++   +L KG  P+ ++ + L+ G+ + G  E+ L L +  L++G   N   ++ +++ +
Sbjct: 475 RLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGL 534

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN----------- 297
           CK  R+ EA  L+ +M+     PD++TY  L  G CK   + +A ++ N           
Sbjct: 535 CKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTI 594

Query: 298 ------------------------EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
                                   EM ++ +SPN+ A+GA++ G C++  +  A   +  
Sbjct: 595 EFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLE 654

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI--------------- 378
           +I    + ++ + + ++  + + G   EA  + + L+   + P I               
Sbjct: 655 MIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFID 714

Query: 379 -----------VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
                      + +N +I+G CK G++ DA+ LL  +K  G      TY++ ++     G
Sbjct: 715 TVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASG 774

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            +     L   M +  + P  VTY  +I GLCK  +L  AV L + ++  G++P+ ITYN
Sbjct: 775 FVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYN 834

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           T+I   CK   + +AF+L  +M    + PT  TY+ILI+GLC  G ++ A  LL  + E+
Sbjct: 835 TLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIEN 894

Query: 548 NISLTKVAYTTIIKAH--CAEGDV 569
           N+    V Y T+I+ +  C   DV
Sbjct: 895 NVDPNYVTYWTLIQGYVRCESVDV 918



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 138/552 (25%), Positives = 259/552 (46%), Gaps = 21/552 (3%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           KEF  S  S + ++      G  + A  +F  M   G      S N +++ L   G +  
Sbjct: 167 KEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGA 226

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
            +     M R G  PD  T +I+AK +  +  +  A + ++++   G + ++V Y  ++ 
Sbjct: 227 TVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMN 286

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA-VGLK 270
           GYC++G   +  ++ + +  +GF  N++ Y++L+   C    ++EA G++ E+     L 
Sbjct: 287 GYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLV 346

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
            D   +  +I G C+  ++  A +L NEM   R+  N F +  ++ G C+   + EA   
Sbjct: 347 VDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNI 406

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
              +       D   YN ++DGY K G + +A + Y  ++    + + +T+N+L+ GFC 
Sbjct: 407 LHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCS 466

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G + DA RL   +   G+ P+ ++ +T ++ + + G  ++ L L +E   + +     T
Sbjct: 467 LGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTT 526

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           +  VI GLCK  ++ EA +L++ M      PD ITY T+   +CK  D+ +A ++LN++ 
Sbjct: 527 FNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELE 586

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
                PT   +N LI G  +       + +L  +    +S   VAY  +I   C EGD+H
Sbjct: 587 NLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLH 646

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
            A   + +M+EKG                      P+  IC  ++  F++ G       +
Sbjct: 647 TAYNLYLEMIEKGLV--------------------PNLFICSSLVSCFYRKGKFDEANLV 686

Query: 631 AAVMIKSGLLPD 642
              ++ + ++PD
Sbjct: 687 LQNLVGTDMIPD 698



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 162/613 (26%), Positives = 292/613 (47%), Gaps = 31/613 (5%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTN 66
           G+VH   FV  +M ++ ++V++  Y++++     +  T+    + D +       N+ T 
Sbjct: 258 GVVHALEFV-EEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTY 316

Query: 67  SIVIDGLCQQSRLQDAILFLQE-TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           ++++ G C +  +++A   +QE    K+         A+++ YC++G  E A  L   M+
Sbjct: 317 TLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMV 376

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
              L  + F YNI+I+G C  G M EA    ++M   GV PD  +Y+ L  G+     ++
Sbjct: 377 DSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMN 436

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A++    +L  G     +TY  L+ G+C +G++++ L+L  +ML +G   N I+ S LL
Sbjct: 437 KAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLL 496

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
               KSG+ ++AL L  E  A GL  +  T++ +I GLCK +++ +A +L ++M   R  
Sbjct: 497 DGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCP 556

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+   +  +  G C+   +  A    + L        +  +N +I G+      G+   +
Sbjct: 557 PDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDI 616

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++  + +SP+ V + +LI G+CK G +  A  L   +   GL P+    ++ ++ +  
Sbjct: 617 LFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYR 676

Query: 426 EGNIQRLLALLQEM-----------------------ETKAIGPTH---VTYTVVIKGLC 459
           +G       +LQ +                       +T A G  H   + + +VI GLC
Sbjct: 677 KGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLC 736

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K  ++++A  LL D+   G   D  TY+++I        +  AF L + M    L P   
Sbjct: 737 KLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIV 796

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYN LI GLC +G+L  A  L   L    IS   + Y T+I  HC +G + +A     +M
Sbjct: 797 TYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRM 856

Query: 580 VEKGFEISIRDYT 592
           +E+G   ++  Y+
Sbjct: 857 IEEGIHPTVFTYS 869



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/568 (26%), Positives = 272/568 (47%), Gaps = 66/568 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y + G + DA  ++ +M +  L+V++  YN ++       R  +    L++   V   P 
Sbjct: 359 YCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRP- 417

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + Y+ + ++DG C++  +  A           F  + ++ NA++  +C LG  + A  L+
Sbjct: 418 DTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLW 477

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            LMLK G+ P+  S + L+ G   +G  E+AL    +    G+  +  T++ +  G   +
Sbjct: 478 FLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKI 537

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A +++ K+      PDI+TY  L  GYC+IG+++   ++   + + GF   +  +
Sbjct: 538 ERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFF 597

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L++    + +  +   +L+EM   GL P+ V Y  LI G CK+  +H A  LY EM  
Sbjct: 598 NSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIE 657

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV------------------ 343
           K + PN F   +++     K    EA +   +L+ ++ I D+                  
Sbjct: 658 KGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVA 717

Query: 344 --------VLYNIMIDGYVKLGNIGEAVQLYRQLIEKR---------------------- 373
                   +++NI+I G  KLG I +A  L   L +K                       
Sbjct: 718 GGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVD 777

Query: 374 -------------ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
                        ++P+IVT+NSLIYG CK+G+++ A  L   +   G+ P+A+TY T +
Sbjct: 778 VAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLI 837

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + +C++G I     L Q M  + I PT  TY+++I GLC Q  ++EA++LL+ M    V 
Sbjct: 838 DKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVD 897

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           P+ +TY T+I+ + +C+ +      L+Q
Sbjct: 898 PNYVTYWTLIQGYVRCESVDVPIMPLDQ 925



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 163/707 (23%), Positives = 306/707 (43%), Gaps = 93/707 (13%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNV 63
           +  G +  A+ V  +M+ L  ++S+++ NS+L  L  T  +     +++ ++ +    + 
Sbjct: 184 ANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDK 243

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T +I+    C+   +  A+ F++E        ++V+ +A+M+ YC++G    A+ +   
Sbjct: 244 FTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDS 303

Query: 124 MLKYGLHPDAFSYNIL------------------------------------IHGLCIAG 147
           +   G  P+  +Y +L                                    I+G C  G
Sbjct: 304 LPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMG 363

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            ME+A    N+M    ++ +   Y+I+  G+  L ++  A  ++ ++   G  PD  +Y 
Sbjct: 364 RMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYN 423

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            L+ GYC+ G + +  +    ML  GF    + Y+ LL   C  G ID+AL L + M   
Sbjct: 424 SLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKK 483

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G+ P+ ++ S L+ G  K  K  KA+ L+ E  ++ ++ N+     ++ GLC+ E + EA
Sbjct: 484 GIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEA 543

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
               D +    C  D++ Y  +  GY K+G++  A ++  +L     +P+I  FNSLI G
Sbjct: 544 EELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITG 603

Query: 388 FC---KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
                ++GKV D   +L  +   GL P+ V Y   +  +C+EG++     L  EM  K +
Sbjct: 604 HFIAKQHGKVND---ILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGL 660

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD---------------------- 482
            P     + ++    ++ K  EA  +L+++    + PD                      
Sbjct: 661 VPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGN 720

Query: 483 ----QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
               +I +N +I   CK   +  A  LL  +        + TY+ LI G   +G +  A 
Sbjct: 721 HHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAF 780

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            L  ++    ++   V Y ++I   C  G++ +A++ F ++  KG   +   Y       
Sbjct: 781 DLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYN------ 834

Query: 599 MLSNGFPPDQEICEVMLIAFH-QGGDLGSVFELAAVMIKSGLLPDKF 644
                           LI  H + G +   F+L   MI+ G+ P  F
Sbjct: 835 ---------------TLIDKHCKDGYITEAFKLKQRMIEEGIHPTVF 866



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/296 (19%), Positives = 131/296 (44%), Gaps = 18/296 (6%)

Query: 362 AVQLYRQLIE--KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           A  L+  L+E  K  S S  +F+ L+      G++  A ++ D ++  G   S  +  + 
Sbjct: 155 APPLFPHLVEVYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSI 214

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N   + G++   +A+ ++M+     P   T  ++ K  CK   +  A++ +E+M  +GV
Sbjct: 215 LNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGV 274

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             + + Y+ ++  +C+      A ++L+ +      P   TY +L+ G C   +++ A+ 
Sbjct: 275 EVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEG 334

Query: 540 LLVSLQEH-NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS-------IRDY 591
           ++  ++++  + + +  +  +I  +C  G +  A     +MV+   +++       I  Y
Sbjct: 335 VVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGY 394

Query: 592 TK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
            K        +    M   G  PD      ++  + + G +   FE    M+++G 
Sbjct: 395 CKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGF 450


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 269/529 (50%), Gaps = 2/529 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V   S VIDG  ++  +  A    +E   +   P  V+ ++++   CK    + A+   
Sbjct: 218 DVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFL 277

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G+ P+ ++YN LI+G    G  +EA+    +M RH + PD +T S+L       
Sbjct: 278 RQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKY 337

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  V   + +KG +P++ +YT+++ GY   G + +   L ++ML  G   ++  +
Sbjct: 338 GKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTF 397

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+ +    G +D+A+ +  EM   G+KPD+VTY  +I  LC+  K+  A++ +N+M  
Sbjct: 398 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 457

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIG 360
           + ++P+ +A+  ++ G C    + +A+    S IM+N +  D+V ++ +I+   KLG + 
Sbjct: 458 QGVAPDKYAYHCLIQGFCTHGSLLKAKELI-SEIMNNGMHLDIVFFSSIINNLCKLGRVM 516

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  ++   +   + P+ V ++ L+ G+C  GK+  A R+ D +   G+EP+ V Y T +
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YC+ G I   L+L +EM  K I P+ + Y ++I GL +  +   A     +M   G+ 
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            ++ TYN ++R   K +   +A  L  ++   N++    T N +I G+     ++ A  L
Sbjct: 637 MNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDL 696

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             S+    +    V Y+ +I     EG V +A   F  M   G E   R
Sbjct: 697 FASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 745



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 154/576 (26%), Positives = 270/576 (46%), Gaps = 14/576 (2%)

Query: 27  LKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR-----NVYTNSIVIDGLCQQSR 78
           L+V+I   N LL      + TD   D    I +  TP      +V++ SI++  LC Q +
Sbjct: 142 LRVNIIIANHLLKGFCEAKRTDEALD----ILLHRTPELGCVPDVFSYSILLKSLCDQGK 197

Query: 79  --LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSY 136
               D +L +    G    P VV+ + ++  + K G    A  LF  M++ G+ PD  +Y
Sbjct: 198 SGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTY 257

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           + ++H LC A +M++A  F   M   GV P+  TY+ L  G+    Q   A +V +++  
Sbjct: 258 SSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
               PD+VT ++L+   C+ G ++E   + + M  +G   NV +Y+++L+     G + +
Sbjct: 318 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVD 377

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
              L   M   G+ PD+ T+++LI+       + KA+ ++NEM    + P+   +  ++ 
Sbjct: 378 MTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA 437

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
            LC    + +A   F+ +I      D   Y+ +I G+   G++ +A +L  +++   +  
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHL 497

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            IV F+S+I   CK G+V DA+ + D     GL P+AV Y+  M+ YC  G +++ L + 
Sbjct: 498 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF 557

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
             M +  I P  V Y  ++ G CK  ++ E + L  +M   G+ P  I YN II    + 
Sbjct: 558 DAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 617

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
                A    ++M    +     TYNI++ GL  N     A  L   L+  N+ +  +  
Sbjct: 618 GRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 677

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            T+I        V +A   F  +   G    +  Y+
Sbjct: 678 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYS 713



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 256/518 (49%), Gaps = 16/518 (3%)

Query: 82  AILFLQETAGKEFGPSVVSLN----AIMSRYC-KLGFAEVAKGLFCLMLKYGLHPDAFSY 136
           A+      A +  GP V+S      AI+   C +    E+A   F  +L+ GL  +    
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 149

Query: 137 NILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           N L+ G C A   +EAL+   +     G  PD  +YSIL K      + SG    + +++
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGK-SGQADDLLRMM 208

Query: 196 IKGS---DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
            +G     PD+V Y+ +I G+ + G+V +   L + M+ +G   + + YS ++ ++CK+ 
Sbjct: 209 AEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKAR 268

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            +D+A   L +M   G+ P+  TY+ LI G     +  +A++++ EM    I P+     
Sbjct: 269 AMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 328

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC+   I EAR  FD++ M     +V  Y IM++GY   G + +   L+  ++  
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 388

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            I+P I TFN LI  +   G +  A  + + ++ HG++P  VTY T + A C  G +   
Sbjct: 389 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           +    +M  + + P    Y  +I+G C    L +A +L+ ++   G+  D + +++II +
Sbjct: 449 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508

Query: 493 FCK---CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
            CK     D +  F L   + LH   PT+  Y++L+DG C+ G ++ A  +  ++    I
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLH---PTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
               V Y T++  +C  G + + ++ F +M++KG + S
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 603



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 244/498 (48%), Gaps = 5/498 (1%)

Query: 33  TYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
           TYN+L+Y    T   W     ++ +++      +V T S+++  LC+  ++++A      
Sbjct: 291 TYNNLIYGYSSTG-QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDT 349

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
            A K   P+V S   +++ Y   G       LF LML  G+ PD +++N+LI      G 
Sbjct: 350 MAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM 409

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +++A+   N+M  HGV+PD +TY  +      + ++  A +   +++ +G  PD   Y  
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI G+C  G++ +  +L   +++ G  L+++ +S +++++CK GR+ +A  +      VG
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           L P  V YS+L+ G C   K+ KA+++++ M S  I PN   +G ++ G C+   I E  
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGL 589

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             F  ++        +LYNI+IDG  + G    A   + ++ E  I+ +  T+N ++ G 
Sbjct: 590 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGL 649

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            KN    +A  L   ++   ++ + +T  T +    +   ++    L   +    + P  
Sbjct: 650 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCV 709

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VTY+++I  L K+  ++EA  +   M   G  PD    N ++R   K  ++ +A   L++
Sbjct: 710 VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSK 769

Query: 509 MWLHNLEPTSATYNILID 526
           +   N      T  +L+D
Sbjct: 770 IDERNFSLEHLTTMLLVD 787



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 131/574 (22%), Positives = 266/574 (46%), Gaps = 3/574 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + + G V+ A  +  +M +  +     TY+S+++ L   R  D        +       N
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T + +I G     + ++A+   +E       P VV+L+ +M   CK G  + A+ +F 
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G +P+ FSY I+++G    G + +  +  + M   G+ PD  T+++L K +    
Sbjct: 349 TMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 408

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A  +  ++   G  PD+VTY  +I   C+IG +++ ++    M+ QG   +  AY 
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C  G + +A  L+ E+   G+  D+V +S +I  LCK  +V  A  +++   + 
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P +  +  ++ G C    + +A   FD+++ +    + V+Y  +++GY K+G I E 
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + L+R++++K I PS + +N +I G  + G+   A+     +   G+  +  TY   +  
Sbjct: 589 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRG 648

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
             +       + L +E+    +    +T   +I G+ +  +++EA  L   +   G+ P 
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 708

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TY+ +I +  K   + +A  + + M     EP S   N ++  L    ++  A   L 
Sbjct: 709 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLS 768

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            + E N SL  +    ++    ++G   + + F 
Sbjct: 769 KIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 217/500 (43%), Gaps = 53/500 (10%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG- 259
           P   TY +L+    +    E  L     +L  G ++N+I  + LL   C++ R DEAL  
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI 168

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDK------------------------------- 288
           LL+    +G  PD+ +YSIL++ LC Q K                               
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDG 228

Query: 289 ------VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
                 V+KA  L+ EM  + I P+   + +++  LC+   + +A  +   ++    + +
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
              YN +I GY   G   EAV++++++    I P +VT + L+   CK GK+ +AR + D
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
           T+ + G  P+  +YT  +N Y  +G +  +  L   M    I P   T+ V+IK      
Sbjct: 349 TMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 408

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            L +A+ +  +M   GV PD +TY T+I + C+   +  A +  NQM    + P    Y+
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            LI G C +G L  A  L+  +  + + L  V +++II   C  G V  A   F   V  
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 583 GFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           G   +   Y+                  F  M+S G  P+  +   ++  + + G +   
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588

Query: 628 FELAAVMIKSGLLPDKFLIN 647
             L   M++ G+ P   L N
Sbjct: 589 LSLFREMLQKGIKPSTILYN 608



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 187/402 (46%), Gaps = 7/402 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETP 60
            Y+  GM+  A+ +  +M++  +K  + TY +++  L    +  D M      I     P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            + Y    +I G C    L  A   + E         +V  ++I++  CKLG    A+ +
Sbjct: 463 -DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 521

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F L +  GLHP A  Y++L+ G C+ G ME+AL   + M   G+EP+ + Y  L  G+  
Sbjct: 522 FDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCK 581

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG-NVEEGLKLREVMLSQGFKLNVI 239
           + +I     + +++L KG  P  + Y ++I G  + G  V   +K  E M   G  +N  
Sbjct: 582 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE-MTESGIAMNKC 640

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+++L  + K+   DEA+ L  E+ A+ +K +++T + +I G+ +  +V +A  L+  +
Sbjct: 641 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASI 700

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               + P    +  ++  L ++ ++ EA   F S+  + C  D  L N ++   +K   I
Sbjct: 701 SRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 760

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
             A     ++ E+  S   +T   L+  F   G   +  R L
Sbjct: 761 VRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 32/249 (12%)

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGP-----THVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           +A C  G     +AL     ++A GP     T  TY +++    +  + + A+     + 
Sbjct: 80  SAACRSGP-ALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLL 138

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE-----PTSATYNILIDGLCV 530
             G+  + I  N +++ FC+ K   +A  +L    LH        P   +Y+IL+  LC 
Sbjct: 139 RTGLRVNIIIANHLLKGFCEAKRTDEALDIL----LHRTPELGCVPDVFSYSILLKSLCD 194

Query: 531 NGDLKNADCLLVSLQEHNI--SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
            G    AD LL  + E     S   VAY+T+I     EGDV+KA   F +MV++G     
Sbjct: 195 QGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDF 254

Query: 589 RDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             Y+               ++F   M++ G  P+      ++  +   G       +   
Sbjct: 255 VTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 314

Query: 634 MIKSGLLPD 642
           M +  +LPD
Sbjct: 315 MRRHSILPD 323


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 151/535 (28%), Positives = 267/535 (49%), Gaps = 38/535 (7%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DA+    +M  ++    I  +N LL  L   +H D +  +Y  ++      +VYT +I+I
Sbjct: 87  DALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILI 146

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           + LC    +                               LGF+ + K     + K G  
Sbjct: 147 NCLCHLHLV------------------------------GLGFSVLGK-----IFKLGFK 171

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P   ++N LI+GLCI G + EA+E  + +   G +P   T++++  G   + + S A   
Sbjct: 172 PSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVW 231

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++K++    +P++V+Y+++I   C+   V E + L   M S G    V+ Y+ L+  MC 
Sbjct: 232 MKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCN 291

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           SG+  +A  L  EM    +KPD+VT+SIL+  LCK+  V +A+ ++ +M    + P+   
Sbjct: 292 SGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVT 351

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + +++ G+C+  +  E+    + ++  N   DVV ++I +D + K G + EA  +   +I
Sbjct: 352 YSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMI 411

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           E+ + P++VT+NSL+ G+C + ++ +AR++ D +   G  P  ++Y   +  YC+   I 
Sbjct: 412 ERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERID 471

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L  EM  K + P  +T+T +I GLC+  +   A +L + M   G  PD ITY+T++
Sbjct: 472 EAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLL 531

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
             FCK   L +A  L   +    L+P      IL+ G+C  G L++A  L  SL 
Sbjct: 532 SGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLS 586



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 247/503 (49%)

Query: 77  SRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSY 136
           S   DA+ +  +       P +   N +++   ++   +    ++  M  +G+    ++ 
Sbjct: 83  SNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTL 142

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
            ILI+ LC    +         + + G +P  IT++ L  G  +  +I  A + +  ++ 
Sbjct: 143 TILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMS 202

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           +G  P + T+T+++ G C+IG     +   + M+    +  V++YS+++ S+CK+  ++E
Sbjct: 203 RGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNE 262

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+ L Y M ++G+ P +VTY+ LI G+C   +  +A  L+ EM    + P+      ++ 
Sbjct: 263 AVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVD 322

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
            LC++ ++ EA   F  +I      D+V Y+ +I G  K     E+  L  +++ + I P
Sbjct: 323 ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRP 382

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            +VTF+  +  FCK G V++A+ +++ +   GL P+ VTY + M+ YC    +     + 
Sbjct: 383 DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF 442

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
             M  K   P  ++Y ++IKG CK  ++ EA QL ++M   G+TP+ IT+ T+I   C+ 
Sbjct: 443 DIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQA 502

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
                A +L  +M  H   P   TY+ L+ G C +G L  A  L  +L++  +    V  
Sbjct: 503 GRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVIC 562

Query: 557 TTIIKAHCAEGDVHKAMTFFCQM 579
             ++   C  G +  A   F  +
Sbjct: 563 KILLGGMCKAGKLEDAKELFSSL 585



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 226/421 (53%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T + +I+GLC + R+ +A+  L     + + P+V +   I++  CK+G    A    
Sbjct: 173 SIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWM 232

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M++    P+  SY+I+I  LC    + EA++    M   G+ P  +TY+ L  G    
Sbjct: 233 KKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNS 292

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            Q   A  + +++L     PD+VT+++L+   C+ G V E L +   M+    + +++ Y
Sbjct: 293 GQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTY 352

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S L+  +CKS    E+  LL EM +  ++PD+VT+SI +   CK+  V +A  + N M  
Sbjct: 353 SSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIE 412

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + + PN   + +++ G C    + EAR  FD ++   C  DV+ YNI+I GY K   I E
Sbjct: 413 RGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDE 472

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A QL+ ++  K ++P+ +T  +LI G C+ G+   A+ L   +  HG  P  +TY+T ++
Sbjct: 473 AKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLS 532

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C+ G++   LAL + ++   + P HV   +++ G+CK  KL++A +L   + +  + P
Sbjct: 533 GFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQP 592

Query: 482 D 482
           D
Sbjct: 593 D 593



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/551 (24%), Positives = 252/551 (45%), Gaps = 58/551 (10%)

Query: 130 HPDAFSYNILIHGLCIAGSM---EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           H DA   N  +   C  GS    ++AL + N M      P    ++ L      +     
Sbjct: 63  HKDASFDNFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDS 122

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
              + +K+   G    + T T+LI   C +  V  G  +   +   GFK ++I ++ L++
Sbjct: 123 VVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLIN 182

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK------------------ 288
            +C  GRI EA+  L  + + G +P + T+++++ GLCK  K                  
Sbjct: 183 GLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEP 242

Query: 289 -----------------VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
                            V++A+ L+  M S  ISP    + +++ G+C      +A + F
Sbjct: 243 EVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILF 302

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             ++  N   DVV ++I++D   K G + EA+ ++ ++I+  + P IVT++SLI+G CK+
Sbjct: 303 KEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKS 362

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
               ++  LL+ +    + P  VT++ +++ +C++G +    +++  M  + + P  VTY
Sbjct: 363 SLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTY 422

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             ++ G C   ++ EA ++ + M   G  PD ++YN +I+ +CK + + +A QL ++M  
Sbjct: 423 NSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSH 482

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             L P S T+  LI GLC  G    A  L   +  H      + Y+T++   C  G + +
Sbjct: 483 KGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDE 542

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           A+  F + ++K                   +   P+  IC+++L    + G L    EL 
Sbjct: 543 ALALF-EALKK-------------------SQLKPNHVICKILLGGMCKAGKLEDAKELF 582

Query: 632 AVMIKSGLLPD 642
           + +    L PD
Sbjct: 583 SSLSIEELQPD 593



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 195/374 (52%), Gaps = 3/374 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G    A+  + KM ELD +  + +Y+ ++ +L   R  +   DL+  ++       V 
Sbjct: 221 KIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVV 280

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I G+C   + + A +  +E       P VV+ + ++   CK G    A  +F  M
Sbjct: 281 TYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKM 340

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++  + PD  +Y+ LIHG+C +   +E+    N+M    + PD +T+SI    F     +
Sbjct: 341 IQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMV 400

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           S A  +I  ++ +G  P++VTY  L+ GYC    ++E  K+ ++M+++G   +V++Y++L
Sbjct: 401 SEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNIL 460

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   CKS RIDEA  L  EM   GL P+ +T++ LI GLC+  + + A +L+ +M S   
Sbjct: 461 IKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGC 520

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+   +  +L G C+   + EA   F++L  S    + V+  I++ G  K G + +A +
Sbjct: 521 PPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKE 580

Query: 365 LYRQLIEKRISPSI 378
           L+  L  + + P +
Sbjct: 581 LFSSLSIEELQPDV 594



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 110/269 (40%), Gaps = 67/269 (24%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
           V+ + GMV +A  +I  M E  L+ ++ TYNSL+                          
Sbjct: 393 VFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLM-------------------------- 426

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
                 DG C  S++ +A         K   P V+S N ++  YCK    + AK LF  M
Sbjct: 427 ------DGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEM 480

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              GL P++ ++  LI GLC AG    A E    MG HG  PD ITYS L  GF      
Sbjct: 481 SHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGF------ 534

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
                                        C+ G+++E L L E +     K N +   +L
Sbjct: 535 -----------------------------CKHGHLDEALALFEALKKSQLKPNHVICKIL 565

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           L  MCK+G++++A  L   +    L+PD+
Sbjct: 566 LGGMCKAGKLEDAKELFSSLSIEELQPDV 594


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 247/494 (50%), Gaps = 7/494 (1%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH-PDAFSYNILIHGLCIAGSMEEALEFTND 158
           +  ++++ + +     +   LF  M  +G   P   +YN LI  LC    +  A  + + 
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M R G  PDA T++ L  G+    Q+  A  +  K+ ++G   D V+Y  LI G+C+ G 
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 219 VEEGLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
           V+E L+L RE+      + ++  ++ L+  +C + R +E L +L +M+ +G +P    Y+
Sbjct: 215 VDEALELFRELE-----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYA 269

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            L+   C++ K  +A ++ NEM    + P +    A++   C +  ++ A   F+S+ + 
Sbjct: 270 ALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLK 329

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
            C  +V  YN M+ G+  +G + +A+ L  Q+ E  + P +VT+N LI G C +G +  A
Sbjct: 330 GCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESA 389

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
            RLL  ++ +GL     TY   ++A C+ G +    +L   +E + I P  VT+  VI G
Sbjct: 390 FRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVING 449

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LCK  K   A   LE M   G  PD  TY+  I + CK K  R+    +++M   +++P+
Sbjct: 450 LCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPS 509

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
           +  Y I+ID L    +   A  +   +     S   V YTT ++A+C EG +H+A     
Sbjct: 510 TVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVM 569

Query: 578 QMVEKGFEISIRDY 591
           +M + G  +    Y
Sbjct: 570 EMKKGGIIVDAMAY 583



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 256/545 (46%), Gaps = 8/545 (1%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
            P+  + NA++   C+      A+    LM++ G  PDAF++N LI G C    ++ A +
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQD 185

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
             + M   G   DA++Y+ L +GF    ++  A ++ ++L      PD+ T+  L+ G C
Sbjct: 186 LFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFREL----EQPDMYTHAALVKGLC 241

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
                EEGL + + M   G++    AY+ L+   C+  + +EA  +L EM   GL P  V
Sbjct: 242 DARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAV 301

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           T + ++   C++ ++  A++++  M  K   PN + + A++ G C    + +A    D +
Sbjct: 302 TCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQM 361

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                  DVV YN++I G    G+I  A +L R +    ++    T+N LI   CK GKV
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +A  L D ++  G+ P++VT+ T +N  C+ G        L++M +    P   TY+  
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPF 481

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I+ LCK    +E +  +++M    V P  + Y  +I    K ++   A ++  QM     
Sbjct: 482 IENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGC 541

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P   TY   +   C  G L  A+ +++ +++  I +  +AY T+I  H + G    A+T
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVT 601

Query: 575 FFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
               M   G       +T  FF ++         E   +   +  +  +L  VFEL  +M
Sbjct: 602 ILKHMT--GVASMPNHFT--FFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELM 657

Query: 635 IKSGL 639
            K+ +
Sbjct: 658 KKNSV 662



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/587 (24%), Positives = 270/587 (45%), Gaps = 17/587 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y RT  +  A  +  KM          +Y +L+     T  + +  +  +  E P ++YT
Sbjct: 174 YCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQP-DMYT 232

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           ++ ++ GLC   R ++ +  LQ+     + P+  +  A++  +C+   AE A+ +   M 
Sbjct: 233 HAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMF 292

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             GL P A +   +++  C  G M  A+     M   G EP+  TY+ + +GF  + ++ 
Sbjct: 293 DNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVY 352

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  ++ ++   G +PD+VTY +LI G C  G++E   +L  +M   G   +   Y+VL+
Sbjct: 353 KAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLI 412

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
            ++CK+G++DEA  L   +E  G++P+ VT++ +I GLCK  K   A     +M S   +
Sbjct: 413 DALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCA 472

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+++ +   +  LC+ +   E   + D ++  +     V Y I+ID   K  N G A ++
Sbjct: 473 PDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRI 532

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           + Q++    SP +VT+ + +  +C  G++ +A  ++  +K  G+   A+ Y T ++ +  
Sbjct: 533 WGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTS 592

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVV----------------IKGLCKQWKLQEAVQ 469
            G     + +L+ M   A  P H T+ ++                   + K  +L +  +
Sbjct: 593 IGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFE 652

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           L E M    V      Y  I+  F + + L +   L++ M   +L      Y  L++  C
Sbjct: 653 LFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFC 712

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
                 +A  LL S+  H      ++Y  ++    AEG   +A   F
Sbjct: 713 KLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIF 759



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 244/514 (47%), Gaps = 8/514 (1%)

Query: 32  QTYNSLLYNLRH---TDIMWDLYDDIKVSETPRNV-YTNSIVIDGLCQQSRLQDAILFLQ 87
           +T+ SLL +      T +M  L+  +     P     T + +I  LC+++ L+ A  +L 
Sbjct: 94  RTFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLS 153

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
                 + P   + N+++  YC+    +VA+ LF  M   G   DA SY  LI G C  G
Sbjct: 154 LMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETG 213

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            ++EALE   ++     +PD  T++ L KG     +      ++QK+   G  P    Y 
Sbjct: 214 RVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYA 269

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            L+  +C+    EE  K+   M   G     +  + ++++ C+ GR+  A+ +   M+  
Sbjct: 270 ALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLK 329

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G +P++ TY+ +++G C   KV+KA+ L ++M    + P+   +  ++ G C    I  A
Sbjct: 330 GCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESA 389

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                 +  +    D   YN++ID   K G + EA  L+  L  + I P+ VTFN++I G
Sbjct: 390 FRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVING 449

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK GK   A   L+ +   G  P   TY+ F+   C+    +  L+ + EM  K + P+
Sbjct: 450 LCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPS 509

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            V YT+VI  L K+     A ++   M  +G +PD +TY T +R++C    L +A  ++ 
Sbjct: 510 TVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVM 569

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +M    +   +  YN LIDG    G   +A  +L
Sbjct: 570 EMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTIL 603



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 212/437 (48%), Gaps = 5/437 (1%)

Query: 159 MGRHGVE-PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           M  HG   P   TY+ L +     + +  A + +  ++  G  PD  T+  LI GYC+  
Sbjct: 119 MYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQ 178

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            ++    L + M  +GF  + ++Y+ L+   C++GR+DEAL L  E+E    +PD+ T++
Sbjct: 179 QLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHA 234

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            L++GLC   +  + + +  +M      P + A+ A++   C ++   EA    + +  +
Sbjct: 235 ALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDN 294

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
             +   V    +++ Y + G +  AV+++  +  K   P++ T+N+++ GFC  GKV  A
Sbjct: 295 GLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKA 354

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             LLD ++  G+EP  VTY   +   C +G+I+    LL+ ME   +     TY V+I  
Sbjct: 355 MALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDA 414

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LCK  K+ EA  L + +   G+ P+ +T+NT+I   CK      A   L +M      P 
Sbjct: 415 LCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPD 474

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
           + TY+  I+ LC     +     +  + + ++  + V YT +I     E +   A   + 
Sbjct: 475 TYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWG 534

Query: 578 QMVEKGFEISIRDYTKS 594
           QMV  G    +  YT S
Sbjct: 535 QMVSLGCSPDVVTYTTS 551



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/605 (24%), Positives = 260/605 (42%), Gaps = 56/605 (9%)

Query: 33  TYNSLLY------NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           TYN+L+       +LRH      L   ++    P     NS+++ G C+  +L  A    
Sbjct: 131 TYNALIRALCRRADLRHAQRYLSLM--VRSGWRPDAFTFNSLIL-GYCRTQQLDVAQDLF 187

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVA----------------------------- 117
            +   + F    VS  A++  +C+ G  + A                             
Sbjct: 188 DKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGE 247

Query: 118 KGLFCL--MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
           +GL+ L  M + G  P   +Y  L+   C     EEA +  N+M  +G+ P A+T + + 
Sbjct: 248 EGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVV 307

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
             +    ++SGA +V + + +KG +P++ TY  ++ G+C +G V + + L + M   G +
Sbjct: 308 NAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVE 367

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +V+ Y++L+   C  G I+ A  LL  ME  GL  D  TY++LI  LCK  KV +A  L
Sbjct: 368 PDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSL 427

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           ++ +  + I PNS     ++ GLC+      A  + + ++ + C  D   Y+  I+   K
Sbjct: 428 FDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCK 487

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
                E +    ++++K + PS V +  +I    K      A R+   +   G  P  VT
Sbjct: 488 TKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVT 547

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           YTT + AYC EG +     ++ EM+   I    + Y  +I G     K   AV +L+ M 
Sbjct: 548 YTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMT 607

Query: 476 VIGVTPDQITY----------------NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
            +   P+  T+                     S  K  +L   F+L   M  +++  ++ 
Sbjct: 608 GVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSAR 667

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            Y  +++G      L     L+  ++E ++ L +  YT+++   C       A    C M
Sbjct: 668 AYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSM 727

Query: 580 VEKGF 584
           +  GF
Sbjct: 728 IGHGF 732



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 127/578 (21%), Positives = 240/578 (41%), Gaps = 52/578 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           +  TG V +A+ +  ++++ D+         L    R  + ++ L    ++   P     
Sbjct: 209 FCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRP-ATRA 267

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + ++D  C++ + ++A   L E       P  V+  A+++ YC+ G    A  +F  M 
Sbjct: 268 YAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMK 327

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G  P+ ++YN ++ G C  G + +A+   + M   GVEPD +TY++L +G  +   I 
Sbjct: 328 LKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIE 387

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A+++++ +   G   D  TY VLI   C+ G V+E   L + +  +G + N + ++ ++
Sbjct: 388 SAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVI 447

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           + +CK G+ D A   L +M + G  PD  TYS  I  LCK     + +   +EM  K + 
Sbjct: 448 NGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVK 507

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P++  +  ++  L ++     A   +  ++   C  DVV Y   +  Y   G + EA  +
Sbjct: 508 PSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENV 567

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGK-------------------------------- 393
             ++ +  I    + +N+LI G    GK                                
Sbjct: 568 VMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQ 627

Query: 394 -------------------VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
                              +AD   L + +K + +  SA  Y   +  + EE  +  + +
Sbjct: 628 RRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTS 687

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L+  M+   +      YT ++   CK     +A  LL  M   G  P+ I+Y  ++  F 
Sbjct: 688 LVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFT 747

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
                 +A ++   +           + I+IDGL   G
Sbjct: 748 AEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQG 785



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/466 (22%), Positives = 197/466 (42%), Gaps = 54/466 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           +   G V+ A+ ++ +M+E  ++  + TYN L+       H +  + L   ++ +    +
Sbjct: 345 FCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAAD 404

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            YT +++ID LC+  ++ +A         +   P+ V+ N +++  CK G  +VA     
Sbjct: 405 QYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLE 464

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+  G  PD ++Y+  I  LC      E L F ++M +  V+P  + Y+I+        
Sbjct: 465 KMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKER 524

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               A ++  +++  G  PD+VTYT  +  YC  G + E   +   M   G  ++ +AY+
Sbjct: 525 NYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYN 584

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC----------KQDKVHKA 292
            L+      G+ D A+ +L  M  V   P+  T+ IL+R L           K   V K 
Sbjct: 585 TLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKT 644

Query: 293 IQLYN-----EMCSKRISPNSF-AHGAILLGLCEKEMITEA------------------- 327
           I+L +     E+  K   P+S  A+ AIL G  E+  + E                    
Sbjct: 645 IELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIY 704

Query: 328 ----------RMYFD------SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
                     RMY D      S+I    + +++ Y  ++ G+   G    A +++R L  
Sbjct: 705 TSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRW 764

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           K  +   + +  +I G  + G       ++  ++    +PS  TY 
Sbjct: 765 KEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYA 810



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/399 (20%), Positives = 160/399 (40%), Gaps = 25/399 (6%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           +TG V +A  +   ++   ++ +  T+N+++  L      D+     + +  +    + Y
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTY 476

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S  I+ LC+    ++ + F+ E   K+  PS V+   ++ R  K     +A  ++  M
Sbjct: 477 TYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQM 536

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G  PD  +Y   +   C  G + EA     +M + G+  DA+ Y+ L  G   + + 
Sbjct: 537 VSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKT 596

Query: 185 SGAWKVIQKLLIKGSDPDIVTY-------------------TVLICGYCQIGNVEEGLKL 225
             A  +++ +    S P+  T+                   T  +    ++ +V E   L
Sbjct: 597 DHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFE---L 653

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
            E+M       +  AY  +L    +  R+DE   L+  M+   L  +   Y+ L+   CK
Sbjct: 654 FELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCK 713

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
                 A  L   M      PN  ++  +L G   +     A+  F  L       D ++
Sbjct: 714 LRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIV 773

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
           + I+IDG ++ G+      +   L + +  PS  T+  L
Sbjct: 774 WKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAML 812



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/168 (19%), Positives = 73/168 (43%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF LM K  +   A +Y  ++ G      ++E     + M    +  +   Y+ L   F 
Sbjct: 653 LFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFC 712

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
            L     AW ++  ++  G  P++++Y  L+ G+   G  +   ++   +  + +  + I
Sbjct: 713 KLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEI 772

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            + +++  + + G  D    ++  +E +  KP   TY++L   L  ++
Sbjct: 773 VWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEELSTRE 820


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 250/472 (52%), Gaps = 11/472 (2%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   + +YG+ P   S N ++  L     ++EA++   ++     E +  +Y+IL K   
Sbjct: 213 LLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELP----EKNTCSYNILLKALC 264

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +I  A ++  ++    S PD+VTY +++ GYC +  +E  +KL   M ++G +LN +
Sbjct: 265 TAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           AY+ +++ +C  G++ +A+ ++ +M   G+  D   ++ ++ G C++  +  A   ++EM
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             + ++ +   + A++ GLC    + EA      +       D V Y ++IDGY K+G +
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA  ++ ++++KR++P++VT+ +L  G CK G V  A  LL  +   GLE +  TY + 
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N  C+ GN+++ +  + +M+   + P   TYT +I  LC+  +L  A  LL++M   G+
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI 561

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P  +TYN ++  FC    +    +LL  M   N+ P + TYN L+   C+  ++K+   
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           +   +    +   +  Y  +IK HC   ++ +A+ F  +M+EKGF ++   Y
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 247/472 (52%), Gaps = 13/472 (2%)

Query: 92  KEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
           +++G  PS  S NA++   C+L   E  +    L  K     +  SYNIL+  LC AG +
Sbjct: 218 RQYGISPSPESCNAVL---CRLPLDEAVQLFQELPEK-----NTCSYNILLKALCTAGRI 269

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           ++A +  ++M      PD +TY I+  G+  LS++  A K++ ++  +G + + V YT +
Sbjct: 270 KDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSV 326

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I   C  G V + +++ E M+  G  L+   ++ ++S  C+ G +  A     EM+  GL
Sbjct: 327 IALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
             D VTY+ LI GLC+  ++ +A ++  EM  K +  ++  +  ++ G C+   +TEA +
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             + ++      +VV Y  + DG  K G++  A +L  ++  K +  +I T+NSLI G C
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLC 506

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K G +  A R +  +   GL+P   TYTT + A C+   + R  +LLQEM  K I PT V
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY V++ G C   +++   +LLE M    + P+  TYN++++ +C  K+++   ++   M
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
               + P   TYNILI G C   ++K A      + E    LT  +Y  +I+
Sbjct: 627 LSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 237/473 (50%), Gaps = 4/473 (0%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           +N  + +I++  LC   R++DA     E A     P VV+   ++  YC L   E A  L
Sbjct: 251 KNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKL 307

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M   GL  +  +Y  +I  LC  G + +A+    DM  HGV  DA  ++ +  GF  
Sbjct: 308 LSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCR 367

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              ++ A     ++  +G   D VTYT LI G C+ G ++E  ++ + M  +G  ++ + 
Sbjct: 368 KGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVT 427

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+VL+   CK G++ EA  +  +M    + P++VTY+ L  GLCKQ  V  A +L +EMC
Sbjct: 428 YTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           SK +  N F + +++ GLC+   + +A      +  +    DV  Y  +I    +   + 
Sbjct: 488 SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELD 547

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A  L +++++K I P+IVT+N L+ GFC +G+V   +RLL+ +    + P+  TY + M
Sbjct: 548 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             YC E N++    + + M ++ + P   TY ++IKG CK   ++EA+    +M   G  
Sbjct: 608 KQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFR 667

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
               +YN +IR   K K   +A +L  +M    L      YN  ID L  N D
Sbjct: 668 LTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID-LSFNED 719



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 223/478 (46%), Gaps = 72/478 (15%)

Query: 33  TYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGK 92
           +YN LL  L     + D +       +P +V T  I++ G C  S L+ AI  L E A +
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR 314

Query: 93  --EFGP----SVVSL-----------------------------NAIMSRYCKLGFAEVA 117
             E  P    SV++L                               +MS +C+ G    A
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAA 374

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           +  F  M K GL  D  +Y  LI+GLC AG ++EA     +M   G++ DA+TY++L  G
Sbjct: 375 RNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDG 434

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +  + +++ A+ V  K++ K   P++VTYT L  G C+ G+V    +L   M S+G +LN
Sbjct: 435 YCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN 494

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD------------------------- 272
           +  Y+ L++ +CK+G +++A+  + +M+  GLKPD                         
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554

Query: 273 ----------LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC-EK 321
                     +VTY++L+ G C   +V    +L   M  K I PN+  + +++   C EK
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
            M +   +Y   ++    + +   YNI+I G+ K  N+ EA+  + ++IEK    +  ++
Sbjct: 615 NMKSTTEIY-KGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           N+LI    K  K  +ARRL + ++   L      Y  +++    E N++  LAL  E+
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 160/318 (50%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +  T +++IDG C+  ++ +A L   +   K   P+VV+  A+    CK G    A  L 
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELL 483

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   GL  + F+YN LI+GLC AG++E+A+    DM   G++PD  TY+ +       
Sbjct: 484 HEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQS 543

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  ++Q++L KG  P IVTY VL+ G+C  G VE G +L E ML +    N   Y
Sbjct: 544 KELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTY 603

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C    +     +   M +  + P+  TY+ILI+G CK   + +A+  ++EM  
Sbjct: 604 NSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIE 663

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K     + ++ A++  L +K+  TEAR  F+ +       +  +YN  ID      N+  
Sbjct: 664 KGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLES 723

Query: 362 AVQLYRQLIEKRISPSIV 379
            + L  +L+E  +  SI 
Sbjct: 724 TLALCDELVEVTLVKSIA 741


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 161/586 (27%), Positives = 274/586 (46%), Gaps = 57/586 (9%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NVY  +I++ GLC+      A+  L+E       P VVS N ++  +C+    E A  L 
Sbjct: 141 NVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLA 200

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G      ++ ILI   C AG M+EA+    +M   G+E D I Y+ L +GF   
Sbjct: 201 NEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDC 260

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++     +  ++L +G  P  +TY  LI G+C++G ++E  ++ E M+ +G + NV  Y
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTY 320

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+  +C  G+  EAL LL  M     +P++VTY+I+I  LCK   V  A+++   M  
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKK 380

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +R  P++  + ++L GLC K                                   G++ E
Sbjct: 381 RRTRPDNITYNSLLGGLCAK-----------------------------------GDLDE 405

Query: 362 AVQLYRQLIEKR--ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           A +L   +++      P +++FN+LI+G CK  ++  A  + D +         VT    
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNIL 465

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N+  + G++ + + L +++    I P   TYT +I G CK   L  A  LL  M +  +
Sbjct: 466 LNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSEL 525

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P    YN ++ S CK   L +A++L  +M   +  P   ++NI+IDG    GD+K+A+ 
Sbjct: 526 PPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAES 585

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           LLV +    +S     Y+ +I      G + +A++FF +M++ GFE              
Sbjct: 586 LLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFE-------------- 631

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                 PD  IC+ +L      G+   + E    ++   ++ DK L
Sbjct: 632 ------PDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKEL 671



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 156/584 (26%), Positives = 291/584 (49%), Gaps = 11/584 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVY 64
           +TG  H    V+A M +     ++  YN LL  L R+ +      L  +++ +    +V 
Sbjct: 122 KTGFAHG---VLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVV 178

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           + + VI G C+   L+ A+    E  G     S+V+   ++  +CK G  + A GL   M
Sbjct: 179 SYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEM 238

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              GL  D   Y  LI G C  G ++      +++   G  P AITY+ L +GF  L ++
Sbjct: 239 KHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRL 298

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++ + ++ +G  P++ TYT LI G C +G  +E L+L  +ML +  + NV+ Y+++
Sbjct: 299 KEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNII 358

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC--SK 302
           ++ +CK   + +AL ++  M+    +PD +TY+ L+ GLC +  + +A +L   M   S 
Sbjct: 359 INKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSS 418

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P+  +  A++ GLC+   + +A   +D L+      D+V  NI+++  +K G++ +A
Sbjct: 419 YTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKA 478

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++L++Q+   +I P+  T+ ++I GFCK G +  A+ LL  ++L  L PS   Y   +++
Sbjct: 479 MELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSS 538

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C++G + +   L +EM+     P  +++ ++I G  K   ++ A  LL  M   G++PD
Sbjct: 539 LCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPD 598

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             TY+ +I  F K   L +A    ++M     EP +   + ++      G+       + 
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVK 658

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEG---DVHKAMTFFCQMVEKG 583
            L + ++ L K    T++   C+     D+ K +       E+G
Sbjct: 659 KLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLRVADDKEEG 702



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 211/441 (47%), Gaps = 25/441 (5%)

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
           +ML +GF  NV  Y++LL  +C++    +A+ LL EM    L PD+V+Y+ +IRG C+  
Sbjct: 132 LMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGK 191

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           ++ KA+QL NEM     S +    G ++   C+   + EA      +       D+++Y 
Sbjct: 192 ELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYT 251

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I G+   G +     L+ +++E+  SP  +T+N+LI GFCK G++ +A  + + +   
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMER 311

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G+ P+  TYT  ++  C  G  +  L LL  M  K   P  VTY ++I  LCK   + +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADA 371

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN--LEPTSATYNILI 525
           ++++E M      PD ITYN+++   C   DL +A +LL  M   +   +P   ++N LI
Sbjct: 372 LEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALI 431

Query: 526 DGLCVNGDLKNA----DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ--- 578
            GLC    L  A    D L+  L   +I  T +   + +K+    GDV+KAM  + Q   
Sbjct: 432 HGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKS----GDVNKAMELWKQISN 487

Query: 579 ------------MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
                       M++   +  + +  K   C M  +  PP       +L +  + G L  
Sbjct: 488 SKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQ 547

Query: 627 VFELAAVMIKSGLLPDKFLIN 647
            + L   M +    PD    N
Sbjct: 548 AWRLFEEMQRDDSFPDVISFN 568



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 183/367 (49%), Gaps = 2/367 (0%)

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
           N E        ML     +N ++ S LL    +  +   A G+L  M   G   ++  Y+
Sbjct: 87  NHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYN 146

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           IL++GLC+  +  KA+ L  EM    + P+  ++  ++ G CE + + +A    + +  S
Sbjct: 147 ILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGS 206

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
            C   +V + I+ID + K G + EA+ L +++  K +   ++ + SLI GFC  G++   
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRG 266

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
           + L D +   G  P A+TY T +  +C+ G ++    + + M  + + P   TYT +I G
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDG 326

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LC   K +EA+QLL  M      P+ +TYN II   CK   +  A +++  M      P 
Sbjct: 327 LCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPD 386

Query: 518 SATYNILIDGLCVNGDLKNADCLL-VSLQEHNISLTKV-AYTTIIKAHCAEGDVHKAMTF 575
           + TYN L+ GLC  GDL  A  LL + L++ + +   V ++  +I   C    +H+A+  
Sbjct: 387 NITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDI 446

Query: 576 FCQMVEK 582
           +  +VEK
Sbjct: 447 YDLLVEK 453



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 222/481 (46%), Gaps = 43/481 (8%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
            + + G + +A+ ++ +MK   L+  +  Y SL                           
Sbjct: 221 AFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSL--------------------------- 253

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
                I G C    L        E   +   P  ++ N ++  +CKLG  + A  +F  M
Sbjct: 254 -----IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFM 308

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G+ P+ ++Y  LI GLC  G  +EAL+  N M +   EP+ +TY+I+       S +
Sbjct: 309 MERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLV 368

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML--SQGFKLNVIAYS 242
           + A ++++ +  + + PD +TY  L+ G C  G+++E  KL  +ML  S     +VI+++
Sbjct: 369 ADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFN 428

Query: 243 VLLSSMCKSGRIDEAL---GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            L+  +CK  R+ +AL    LL E    G   D+VT +IL+    K   V+KA++L+ ++
Sbjct: 429 ALIHGLCKGNRLHQALDIYDLLVEKLGAG---DIVTTNILLNSTLKSGDVNKAMELWKQI 485

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            + +I PNS  +  ++ G C+  M+  A+     + +S     V  YN ++    K G +
Sbjct: 486 SNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTL 545

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A +L+ ++      P +++FN +I G  K G +  A  LL  +   GL P   TY+  
Sbjct: 546 DQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKL 605

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW---KLQEAVQLLEDMYV 476
           +N + + G +   ++   +M      P       V+K    Q    KL E V+ L D  V
Sbjct: 606 INRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDV 665

Query: 477 I 477
           +
Sbjct: 666 V 666


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 133/399 (33%), Positives = 213/399 (53%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           GL P+ ++YN +I  LC  G + EA     +M   G+ PD + Y+ L  GF  L  +S A
Sbjct: 218 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 277

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           +++  ++  +   PD +TYT +ICG CQ G V E  KL   M+ +  + + + Y+ L+  
Sbjct: 278 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 337

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            CK G++ EA  L  +M  +GL P++VTY+ L  GLCK  +V  A +L +EMC K +  N
Sbjct: 338 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN 397

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
            + + +++ GLC+   I +A      + ++    D V Y  ++D Y K   +  A +L R
Sbjct: 398 IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLR 457

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           Q++++ + P++VTFN L+ GFC +G + D  +LL  +   G+ P+A TY + +  YC   
Sbjct: 458 QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN 517

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           N++    + + M  K + P   TY ++IKG CK   ++EA  L  DM   G      +YN
Sbjct: 518 NMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYN 577

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
            +I+ F K K   +A +L  QM    L      YNI  D
Sbjct: 578 ALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 616



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 215/403 (53%), Gaps = 2/403 (0%)

Query: 184 ISGAW--KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           + G W  K+I+++ IKG  P+  TY  +I   C+ G V E  ++   M+S+G   + + Y
Sbjct: 202 LKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIY 261

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   CK G +  A  L  EM+   + PD +TY+ +I GLC+  +V +A +L++EM  
Sbjct: 262 TTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVC 321

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           KR+ P+   + A++ G C++  + EA    + ++      ++V Y  + DG  K G +  
Sbjct: 322 KRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDT 381

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +L  ++  K +  +I T+NSL+ G CK G +  A +L+  +++ G  P AVTYTT M+
Sbjct: 382 ANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMD 441

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           AYC+   + R   LL++M  + + PT VT+ V++ G C    L++  +LL+ M   G+ P
Sbjct: 442 AYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMP 501

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +  TYN++I+ +C   ++R   ++   M    + P   TYNILI G C   ++K A  L 
Sbjct: 502 NATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLH 561

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             +     +LT  +Y  +IK         +A   F QM  +G 
Sbjct: 562 RDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGL 604



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 234/473 (49%), Gaps = 7/473 (1%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIH-------GLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           A+ LF  ML YGL     S N+ I        G+ IA   E  L+   +M   G++P+  
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           TY+ +        +++ A +V+++++ +G  PD V YT LI G+C++GNV    +L + M
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
             +    + I Y+ ++  +C++GR+ EA  L +EM    L+PD VTY+ LI G CK+ K+
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A  L+N+M    ++PN   + A+  GLC+   +  A      +       ++  YN +
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           ++G  K GNI +AV+L + +      P  VT+ +L+  +CK+ ++  A  LL  +    L
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 464

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           +P+ VT+   MN +C  G ++    LL+ M  K I P   TY  +IK  C +  ++   +
Sbjct: 465 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 524

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +   M   GV PD  TYN +I+  CK +++++A+ L   M       T ++YN LI G  
Sbjct: 525 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFY 584

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
                  A  L   ++   +   +  Y      +  EG +   +    + +EK
Sbjct: 585 KRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEK 637



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 231/476 (48%), Gaps = 57/476 (11%)

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCK-------SGRIDEALGLLYEMEAVGLKPDLVTY 276
           KL + ML+ G  ++V + ++ +S + +       + + +  L L+ EM+  GLKP+  TY
Sbjct: 167 KLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTY 226

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + +I  LCK  KV +A ++  EM S+ I+P+   +  ++ G C+   ++ A   FD +  
Sbjct: 227 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 286

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                D + Y  +I G  + G + EA +L+ +++ KR+ P  VT+ +LI G+CK GK+ +
Sbjct: 287 RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKE 346

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  L + +   GL P+ VTYT   +  C+ G +     LL EM  K +     TY  ++ 
Sbjct: 347 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVN 406

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLCK   + +AV+L++DM V G  PD +TY T++ ++CK +++ +A +LL QM    L+P
Sbjct: 407 GLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 466

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNI--------SLTKV-------------- 554
           T  T+N+L++G C++G L++ + LL  + E  I        SL K               
Sbjct: 467 TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIY 526

Query: 555 -------------AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT--------- 592
                         Y  +IK HC   ++ +A      MV KGF +++  Y          
Sbjct: 527 RGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKR 586

Query: 593 ------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                 +  F  M   G   D+EI  +     +  G +    EL    I+  L+ D
Sbjct: 587 KKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGD 642



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 209/425 (49%), Gaps = 37/425 (8%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L +++++     N YT + VI  LC+  ++ +A   L+E   +   P  V    ++  +C
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           KLG    A  LF  M K  + PD  +Y  +I GLC  G + EA +  ++M    +EPD +
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           TY+ L  G+    ++  A+ +  ++L  G  P+IVTYT L  G C+ G V+   +L   M
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
             +G +LN+  Y+ L++ +CK+G ID+A+ L+ +ME  G  PD VTY+ L+   CK  ++
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 449

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLC----------------EKEMITEARMYFDS 333
            +A +L  +M  + + P       ++ G C                EK ++  A  Y +S
Sbjct: 450 VRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTY-NS 508

Query: 334 LIMSNCIQ--------------------DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           LI   CI+                    D   YNI+I G+ K  N+ EA  L+R ++ K 
Sbjct: 509 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 568

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
            + ++ ++N+LI GF K  K  +AR L + ++  GL      Y  F +   +EG ++  L
Sbjct: 569 FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTL 628

Query: 434 ALLQE 438
            L  E
Sbjct: 629 ELCDE 633



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 192/381 (50%), Gaps = 3/381 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           + + G V  A  +  +M++  +     TY +++  L  T  + +   L+ ++       +
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +IDG C++ ++++A     +       P++V+  A+    CK G  + A  L  
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + GL  + ++YN L++GLC AG++++A++   DM   G  PDA+TY+ L   +    
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A ++++++L +   P +VT+ VL+ G+C  G +E+G KL + ML +G   N   Y+
Sbjct: 448 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 507

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C    +     +   M A G+ PD  TY+ILI+G CK   + +A  L+ +M  K
Sbjct: 508 SLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGK 567

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             +    ++ A++ G  +++   EAR  F+ +     + D  +YNI  D     G +   
Sbjct: 568 GFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELT 627

Query: 363 VQLYRQLIEKRISPSIVTFNS 383
           ++L  + IEK +   I T N+
Sbjct: 628 LELCDEAIEKCLVGDIQTKNT 648



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 7/206 (3%)

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI-------QRLLALLQEMETKAIGP 446
           V+ AR+L D +  +GL  S  +   F++   E+ +        + +L L++EM+ K + P
Sbjct: 162 VSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKP 221

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              TY  VI  LCK  K+ EA ++L +M   G+ PD + Y T+I  FCK  ++  A++L 
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           ++M    + P   TY  +I GLC  G +  AD L   +    +   +V YT +I  +C E
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 341

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYT 592
           G + +A +   QM++ G   +I  YT
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYT 367


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/607 (25%), Positives = 297/607 (48%), Gaps = 45/607 (7%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTDIMWDLYDDI----- 54
           ++A  Y++  M   A+ +  +M E+   +  I++YNSLL  L  ++  WD  +       
Sbjct: 58  LVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESN-KWDEAESFFLYFE 116

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
            +  +P N+ T +I+I   C++ +   A   L    G+ F P V S   +++   K G+ 
Sbjct: 117 TMGLSP-NLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYM 175

Query: 115 EVAKGLFCLMLKYGLHPDAF------------------------------------SYNI 138
             A  LF  M + G+ PD                                      SYN+
Sbjct: 176 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 235

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           +I+GLC  G  +E+ E  + M ++    D  TYS L  G      + GA +V +++   G
Sbjct: 236 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 295

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD+V Y  ++ GY + G +EE L+L +VM  +G +  V++Y++L+  + ++ ++DEA+
Sbjct: 296 VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAI 354

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +   +       D +TY +L+ GLCK   ++KA+ +  E  + R   ++FA+ +++ GL
Sbjct: 355 SIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGL 414

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C +  + E     D +    C  +  + N +I+G+V+   + +A++ +  ++ K   P++
Sbjct: 415 CREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTV 474

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VT+N+LI G  K  + ++A  L+  +   G +P+ +TY+  MN  C+   +   L L  +
Sbjct: 475 VTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQ 534

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
              K   P    + ++I GLC   K+++A+QL  +M      P+ +T+NT++  F K +D
Sbjct: 535 ALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRD 594

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
             +A ++ + +  + L+P   +YNI + GLC    + +A   L    +  +  T + +  
Sbjct: 595 FERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNI 654

Query: 559 IIKAHCA 565
           +++ + A
Sbjct: 655 LVQGYLA 661



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/548 (24%), Positives = 242/548 (44%), Gaps = 57/548 (10%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P + S N++++   +    + A+  F      GL P+  +YNILI   C     ++A E 
Sbjct: 87  PGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKEL 146

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            N M   G  PD  +Y  L         +S A K+  ++  +G  PD+  Y +LI G+ +
Sbjct: 147 LNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFK 206

Query: 216 IGNVEEGLKLREVMLS-QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
            G++    ++ E +L       N+ +Y+V+++ +CK G+ DE+  + + M+      DL 
Sbjct: 207 KGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY 266

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TYS LI GLC    +  A ++Y EM    +SP                            
Sbjct: 267 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSP---------------------------- 298

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                  DVV+YN M++GY++ G I E ++L++ ++EK    ++V++N LI G  +N KV
Sbjct: 299 -------DVVVYNTMLNGYLRAGRIEECLELWK-VMEKEGCRTVVSYNILIRGLFENAKV 350

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +A  + + +        ++TY   ++  C+ G + + L++L+E E          Y+ +
Sbjct: 351 DEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSM 410

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I GLC++ +L E   +L+ M   G  P+    N +I  F +   L  A +    M     
Sbjct: 411 INGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGC 470

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            PT  TYN LI+GL        A  L+  + +       + Y+ ++   C    +  A+ 
Sbjct: 471 FPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALN 530

Query: 575 FFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
            +CQ +EK                    GF PD ++  +++      G +    +L + M
Sbjct: 531 LWCQALEK--------------------GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 570

Query: 635 IKSGLLPD 642
            +   +P+
Sbjct: 571 KQRNCVPN 578



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 242/497 (48%), Gaps = 9/497 (1%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIM-----WDLYDDIKVSETP 60
           ++ G + DA+ +  +M E  +   +  YN L+    +  DI+     W+    +K     
Sbjct: 170 AKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL--LKGPSVY 227

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N+ + +++I+GLC+  +  ++          E G  + + + ++   C  G  + A  +
Sbjct: 228 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 287

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           +  M + G+ PD   YN +++G   AG +EE LE    M + G     ++Y+IL +G   
Sbjct: 288 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFE 346

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
            +++  A  + + L  K    D +TY VL+ G C+ G + + L + E   +    L+  A
Sbjct: 347 NAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFA 406

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS +++ +C+ GR+DE  G+L +M   G KP+    + +I G  +  K+  A++ +  M 
Sbjct: 407 YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMV 466

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           SK   P    +  ++ GL + E  +EA      ++      +++ Y+++++G  +   + 
Sbjct: 467 SKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLD 526

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A+ L+ Q +EK   P +   N +I+G C +GKV DA +L   +K     P+ VT+ T M
Sbjct: 527 MALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLM 586

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             + +  + +R   +   +    + P  ++Y + +KGLC   ++ +AV  L D    GV 
Sbjct: 587 EGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVL 646

Query: 481 PDQITYNTIIRSFCKCK 497
           P  IT+N +++ +   K
Sbjct: 647 PTAITWNILVQGYLALK 663



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 157/299 (52%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T  +++ GLC+   L  A+  L+E           + +++++  C+ G  +   G+   M
Sbjct: 371 TYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 430

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K+G  P+ +  N +I+G   A  +E+AL F  +M   G  P  +TY+ L  G     + 
Sbjct: 431 TKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERF 490

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           S A+ +++++L KG  P+++TY++L+ G CQ   ++  L L    L +GFK +V  ++++
Sbjct: 491 SEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNII 550

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +C SG++++AL L  EM+     P+LVT++ L+ G  K     +A ++++ +    +
Sbjct: 551 IHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGL 610

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            P+  ++   L GLC    I++A  + +  +    +   + +NI++ GY+ L    E V
Sbjct: 611 QPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPV 669



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 22/289 (7%)

Query: 352 GYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            Y K     +A+ +++++ E     P I ++NSL+    ++ K  +A       +  GL 
Sbjct: 62  AYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLS 121

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+  TY   +   C +    +   LL  M  +   P   +Y  +I  L K   + +A++L
Sbjct: 122 PNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKL 181

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL-HNLEPTSATYNILIDGLC 529
            ++M   GVTPD   YN +I  F K  D+  A ++  ++    ++ P   +YN++I+GLC
Sbjct: 182 FDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLC 241

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             G    +  +   ++++        Y+T+I   C  G++  A   + +M E        
Sbjct: 242 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE-------- 293

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
                       NG  PD  +   ML  + + G +    EL  VM K G
Sbjct: 294 ------------NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 330


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 270/534 (50%), Gaps = 7/534 (1%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G++ DAV  +A++++L +  + +T N +L  L   R   ++  L++ +       NV+T 
Sbjct: 147 GLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPAP----NVFTF 202

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +IVID LC+Q  L +A             P VV+ N+++  Y K G  E  + L   M K
Sbjct: 203 NIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRK 262

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G   D  +YN LI+     G +E+A  +  +M R GV  + +T S     F     +  
Sbjct: 263 SGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVRE 322

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A K+  ++ ++G  P+  TYT L+ G C+ G +++ + L + M+ QG   NV+ Y+V++ 
Sbjct: 323 AMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVD 382

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CK G++  A  +L  ME  G+K + + Y+ LI G        +A+ L NEM +K +  
Sbjct: 383 GLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMEL 442

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +G ++ GLC+ + + EA+     +       + V+Y  ++D + K G   EAV L 
Sbjct: 443 DVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALL 502

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++ +  + P++VT+ +LI G CK G + +A    D ++  GL+P+   YTT ++ +C+ 
Sbjct: 503 HKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKI 562

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G++ + + L+ EM  K +    V YT +I G  KQ  LQ A  L   M   G+  D   Y
Sbjct: 563 GSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCY 622

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
              I  FC    +++A  +L++M    + P    YN LI      G+++ A  L
Sbjct: 623 TCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSL 676



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 239/563 (42%), Gaps = 81/563 (14%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           L     L DA+  L         P+  + N I+ R  +        GL   + ++   P+
Sbjct: 143 LADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLAR----NRQGGLVRRLFEHLPAPN 198

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
            F++NI+I  LC  G + EA                                     +  
Sbjct: 199 VFTFNIVIDFLCKQGELVEA-----------------------------------RALFV 223

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           ++   G  PD+VTY  LI GY + G +EE   L   M   G   +V+ Y+ L++   K G
Sbjct: 224 RMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFG 283

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            I++A     EM+ +G+  ++VT S  +   CK+  V +A++L+ +M  + + PN F + 
Sbjct: 284 WIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYT 343

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG------------ 360
           +++ G C+   + +A +  D ++    + +VV Y +M+DG  K G +             
Sbjct: 344 SLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERA 403

Query: 361 -----------------------EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
                                   A+ L  ++  K +   +  + +LI+G CK  K+ +A
Sbjct: 404 GVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEA 463

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
           + LL  +   GL P+ V YTT M+A+ + G     +ALL ++    + P  VTY  +I G
Sbjct: 464 KSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDG 523

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LCK   + EA+   + M  +G+ P+   Y T+I  FCK   L KA  L+N+M    +   
Sbjct: 524 LCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLD 583

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
              Y  LIDG    GDL+ A  L   + E  + L    YT  I   C    + +A     
Sbjct: 584 KVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLS 643

Query: 578 QMVEKG-------FEISIRDYTK 593
           +M+  G       +   IR Y K
Sbjct: 644 EMIGTGITPDKTAYNCLIRKYQK 666



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 233/470 (49%), Gaps = 3/470 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           + G + +A  +  +MK +     + TYNSL+        + +   L  +++ S    +V 
Sbjct: 211 KQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVV 270

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I+   +   ++ A  +  E        +VV+L+  +  +CK G    A  LF  M
Sbjct: 271 TYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQM 330

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G+ P+ F+Y  L+ G C AG +++A+   ++M   G+ P+ +TY+++  G     ++
Sbjct: 331 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 390

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A  V+  +   G   + + YT LI G+    N E  L L   M ++G +L+V  Y  L
Sbjct: 391 AVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTL 450

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +CK  ++DEA  LL++M+  GL+P+ V Y+ ++    K  K  +A+ L +++    +
Sbjct: 451 IWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGL 510

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   + A++ GLC+   I EA  +FD +       +V +Y  +IDG+ K+G++ +AV 
Sbjct: 511 QPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVH 570

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L  ++++K +S   V + SLI G  K G +  A  L   +   GL+     YT F++ +C
Sbjct: 571 LMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFC 630

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
               +Q    +L EM    I P    Y  +I+   K   ++EA  L  +M
Sbjct: 631 NMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 218/439 (49%), Gaps = 3/439 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           Y + G + +   ++++M++      + TYN+L+         +  +  + ++K      N
Sbjct: 244 YGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMAN 303

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T S  +D  C++  +++A+    +   +   P+  +  +++   CK G  + A  L  
Sbjct: 304 VVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLD 363

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+  GL P+  +Y +++ GLC  G +  A +  + M R GV+ + + Y+ L  G  +  
Sbjct: 364 EMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNK 423

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               A  ++ ++  KG + D+  Y  LI G C++  ++E   L   M   G + N + Y+
Sbjct: 424 NSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYT 483

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++ +  K+G+  EA+ LL+++   GL+P++VTY  LI GLCK   +++AI  +++M   
Sbjct: 484 TIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMREL 543

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN   +  ++ G C+   +++A    + ++      D V+Y  +IDG++K G++  A
Sbjct: 544 GLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGA 603

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L  ++IE  +   +  +   I GFC    + +AR +L  +   G+ P    Y   +  
Sbjct: 604 FALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRK 663

Query: 423 YCEEGNIQRLLALLQEMET 441
           Y + GN++   +L  EME+
Sbjct: 664 YQKLGNMEEASSLQNEMES 682



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 241/575 (41%), Gaps = 106/575 (18%)

Query: 162 HGVEPDAITYSILAKGFHL---------LSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           H V PD +    L    H+             + + +++ +LL  G  P +    V I  
Sbjct: 60  HAVAPDHLLSHPLPSSAHICLAAHLAARARLFAHSRRLLSRLLGAGHRPHLAASLVDI-- 117

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIA--YSVLLSSMCKSGRIDEALGLLYEMEAV--- 267
                       L    L+ G   + +   +  LLS +   G +D+A+  L  +  +   
Sbjct: 118 ------------LHRAALALGPHRSALPSVFDTLLSLLADHGLLDDAVRALARVRQLRVP 165

Query: 268 -------------------GL---------KPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
                              GL          P++ T++I+I  LCKQ ++ +A  L+  M
Sbjct: 166 PNTRTCNHILLRLARNRQGGLVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRM 225

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            +   SP+   + +++ G  +   + E  +    +  S C  DVV YN +I+ + K G I
Sbjct: 226 KAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWI 285

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A   + ++    +  ++VT ++ +  FCK G V +A +L   +++ G+ P+  TYT+ 
Sbjct: 286 EKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSL 345

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C+ G +   + LL EM  + + P  VTYTV++ GLCK+ K+  A  +L  M   GV
Sbjct: 346 VDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGV 405

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             +++ Y T+I      K+  +A  LLN+M    +E   + Y  LI GLC    L  A  
Sbjct: 406 KANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKS 465

Query: 540 LLVSLQEHNISLTKVAYTTIIKAH-----------------------------------C 564
           LL  + +  +    V YTTI+ A                                    C
Sbjct: 466 LLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLC 525

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQE 609
             G +++A++ F +M E G + +++ YT     FC              M+  G   D+ 
Sbjct: 526 KAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKV 585

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           +   ++    + GDL   F L A MI++GL  D +
Sbjct: 586 VYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLY 620



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 117/256 (45%), Gaps = 3/256 (1%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A+ ++ +MK   +++ +  Y +L++ L   +  D    L   +       N    + ++D
Sbjct: 428 ALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMD 487

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
              +  +  +A+  L +       P+VV+  A++   CK G    A   F  M + GL P
Sbjct: 488 AFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDP 547

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           +   Y  LI G C  GS+ +A+   N+M   G+  D + Y+ L  G      + GA+ + 
Sbjct: 548 NVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALK 607

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            K++  G   D+  YT  I G+C +  ++E   +   M+  G   +  AY+ L+    K 
Sbjct: 608 AKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKL 667

Query: 252 GRIDEALGLLYEMEAV 267
           G ++EA  L  EME+V
Sbjct: 668 GNMEEASSLQNEMESV 683


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 250/472 (52%), Gaps = 11/472 (2%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   + +YG+ P   S N ++  L     ++EA++   ++     E +  +Y+IL K   
Sbjct: 213 LLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELP----EKNTCSYNILLKALC 264

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +I  A ++  ++    S PD+VTY +++ GYC +  +E  +KL   M ++G +LN +
Sbjct: 265 TAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           AY+ +++ +C  G++ +A+ ++ +M   G+  D   ++ ++ G C++  +  A   ++EM
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             + ++ +   + A++ GLC    + EA      +       D V Y ++IDGY K+G +
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA  ++ ++++KR++P++VT+ +L  G CK G V  A  LL  +   GLE +  TY + 
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N  C+ GN+++ +  + +M+   + P   TYT +I  LC+  +L  A  LL++M   G+
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI 561

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P  +TYN ++  FC    +    +LL  M   N+ P + TYN L+   C+  ++K+   
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           +   +    +   +  Y  +IK HC   ++ +A+ F  +M+EKGF ++   Y
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 253/490 (51%), Gaps = 13/490 (2%)

Query: 92  KEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
           +++G  PS  S NA++   C+L   E  +    L  K     +  SYNIL+  LC AG +
Sbjct: 218 RQYGISPSPESCNAVL---CRLPLDEAVQLFQELPEK-----NTCSYNILLKALCTAGRI 269

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           ++A +  ++M      PD +TY I+  G+  LS++  A K++ ++  +G + + V YT +
Sbjct: 270 KDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSV 326

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I   C  G V + +++ E M+  G  L+   ++ ++S  C+ G +  A     EM+  GL
Sbjct: 327 IALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
             D VTY+ LI GLC+  ++ +A ++  EM  K +  ++  +  ++ G C+   +TEA +
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             + ++      +VV Y  + DG  K G++  A +L  ++  K +  +I T+NSLI G C
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLC 506

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K G +  A R +  +   GL+P   TYTT + A C+   + R  +LLQEM  K I PT V
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY V++ G C   +++   +LLE M    + P+  TYN++++ +C  K+++   ++   M
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               + P   TYNILI G C   ++K A      + E    LT  +Y  +I+    +   
Sbjct: 627 LSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKF 686

Query: 570 HKAMTFFCQM 579
            +A   F +M
Sbjct: 687 TEARRLFEKM 696



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 237/473 (50%), Gaps = 4/473 (0%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           +N  + +I++  LC   R++DA     E A     P VV+   ++  YC L   E A  L
Sbjct: 251 KNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKL 307

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M   GL  +  +Y  +I  LC  G + +A+    DM  HGV  DA  ++ +  GF  
Sbjct: 308 LSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCR 367

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              ++ A     ++  +G   D VTYT LI G C+ G ++E  ++ + M  +G  ++ + 
Sbjct: 368 KGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVT 427

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+VL+   CK G++ EA  +  +M    + P++VTY+ L  GLCKQ  V  A +L +EMC
Sbjct: 428 YTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           SK +  N F + +++ GLC+   + +A      +  +    DV  Y  +I    +   + 
Sbjct: 488 SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELD 547

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A  L +++++K I P+IVT+N L+ GFC +G+V   +RLL+ +    + P+  TY + M
Sbjct: 548 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             YC E N++    + + M ++ + P   TY ++IKG CK   ++EA+    +M   G  
Sbjct: 608 KQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFR 667

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
               +YN +IR   K K   +A +L  +M    L      YN  ID L  N D
Sbjct: 668 LTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID-LSFNED 719



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 223/478 (46%), Gaps = 72/478 (15%)

Query: 33  TYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGK 92
           +YN LL  L     + D +       +P +V T  I++ G C  S L+ AI  L E A +
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR 314

Query: 93  --EFGP----SVVSL-----------------------------NAIMSRYCKLGFAEVA 117
             E  P    SV++L                               +MS +C+ G    A
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAA 374

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           +  F  M K GL  D  +Y  LI+GLC AG ++EA     +M   G++ DA+TY++L  G
Sbjct: 375 RNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDG 434

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +  + +++ A+ V  K++ K   P++VTYT L  G C+ G+V    +L   M S+G +LN
Sbjct: 435 YCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN 494

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD------------------------- 272
           +  Y+ L++ +CK+G +++A+  + +M+  GLKPD                         
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554

Query: 273 ----------LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC-EK 321
                     +VTY++L+ G C   +V    +L   M  K I PN+  + +++   C EK
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
            M +   +Y   ++    + +   YNI+I G+ K  N+ EA+  + ++IEK    +  ++
Sbjct: 615 NMKSTTEIY-KGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           N+LI    K  K  +ARRL + ++   L      Y  +++    E N++  LAL  E+
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 250/472 (52%), Gaps = 11/472 (2%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   + +YG+ P   S N ++  L     ++EA++   ++     E +  +Y+IL K   
Sbjct: 213 LLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELP----EKNTCSYNILLKALC 264

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +I  A ++  ++    S PD+VTY +++ GYC +  +E  +KL   M ++G +LN +
Sbjct: 265 TAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           AY+ +++ +C  G++ +A+ ++ +M   G+  D   ++ ++ G C++  +  A   ++EM
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             + ++ +   + A++ GLC    + EA      +       D V Y ++IDGY K+G +
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA  ++ ++++KR++P++VT+ +L  G CK G V  A  LL  +   GLE +  TY + 
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N  C+ GN+++ +  + +M+   + P   TYT +I  LC+  +L  A  LL++M   G+
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGI 561

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P  +TYN ++  FC    +    +LL  M   N+ P + TYN L+   C+  ++K+   
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           +   +    +   +  Y  +IK HC   ++ +A+ F  +M+EKGF ++   Y
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 253/490 (51%), Gaps = 13/490 (2%)

Query: 92  KEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
           +++G  PS  S NA++   C+L   E  +    L  K     +  SYNIL+  LC AG +
Sbjct: 218 RQYGISPSPESCNAVL---CRLPLDEAVQLFQELPEK-----NTCSYNILLKALCTAGRI 269

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           ++A +  ++M      PD +TY I+  G+  LS++  A K++ ++  +G + + V YT +
Sbjct: 270 KDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSV 326

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I   C  G V + +++ E M+  G  L+   ++ ++S  C+ G +  A     EM+  GL
Sbjct: 327 IALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
             D VTY+ LI GLC+  ++ +A ++  EM  K +  ++  +  ++ G C+   +TEA +
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             + ++      +VV Y  + DG  K G++  A +L  ++  K +  +I T+NSLI G C
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLC 506

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K G +  A R +  +   GL+P   TYTT + A C+   + R  +LLQEM  K I PT V
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY V++ G C   +++   +LLE M    + P+  TYN++++ +C  K+++   ++   M
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               + P   TYNILI G C   ++K A      + E    LT  +Y  +I+    +   
Sbjct: 627 LSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKF 686

Query: 570 HKAMTFFCQM 579
            +A   F +M
Sbjct: 687 TEARRLFEKM 696



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 237/473 (50%), Gaps = 4/473 (0%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           +N  + +I++  LC   R++DA     E A     P VV+   ++  YC L   E A  L
Sbjct: 251 KNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKL 307

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M   GL  +  +Y  +I  LC  G + +A+    DM  HGV  DA  ++ +  GF  
Sbjct: 308 LSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCR 367

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              ++ A     ++  +G   D VTYT LI G C+ G ++E  ++ + M  +G  ++ + 
Sbjct: 368 KGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVT 427

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+VL+   CK G++ EA  +  +M    + P++VTY+ L  GLCKQ  V  A +L +EMC
Sbjct: 428 YTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           SK +  N F + +++ GLC+   + +A      +  +    DV  Y  +I    +   + 
Sbjct: 488 SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELD 547

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A  L +++++K I P+IVT+N L+ GFC +G+V   +RLL+ +    + P+  TY + M
Sbjct: 548 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             YC E N++    + + M ++ + P   TY ++IKG CK   ++EA+    +M   G  
Sbjct: 608 KQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFR 667

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
               +YN +IR   K K   +A +L  +M    L      YN  ID L  N D
Sbjct: 668 LTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYID-LSFNED 719



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 223/478 (46%), Gaps = 72/478 (15%)

Query: 33  TYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGK 92
           +YN LL  L     + D +       +P +V T  I++ G C  S L+ AI  L E A +
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR 314

Query: 93  --EFGP----SVVSL-----------------------------NAIMSRYCKLGFAEVA 117
             E  P    SV++L                               +MS +C+ G    A
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAA 374

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           +  F  M K GL  D  +Y  LI+GLC AG ++EA     +M   G++ DA+TY++L  G
Sbjct: 375 RNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDG 434

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +  + +++ A+ V  K++ K   P++VTYT L  G C+ G+V    +L   M S+G +LN
Sbjct: 435 YCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN 494

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD------------------------- 272
           +  Y+ L++ +CK+G +++A+  + +M+  GLKPD                         
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554

Query: 273 ----------LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC-EK 321
                     +VTY++L+ G C   +V    +L   M  K I PN+  + +++   C EK
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
            M +   +Y   ++    + +   YNI+I G+ K  N+ EA+  + ++IEK    +  ++
Sbjct: 615 NMKSTTEIY-KGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           N+LI    K  K  +ARRL + ++   L      Y  +++    E N++  LAL  E+
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/580 (26%), Positives = 275/580 (47%), Gaps = 32/580 (5%)

Query: 13  HDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDG 72
           H+A FV+  +   +  +S+ +YN L   L      + L D++       N     ++ DG
Sbjct: 137 HEARFVLNLLTHHEFSLSVTSYNRLFMVLSR----FGLIDEL-------NCLFKDMLNDG 185

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           +                      P+++S N +++ +CK+G   VAK  FC ++K+G   D
Sbjct: 186 V---------------------EPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCD 224

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
           +F+Y  LI G C    + +A +    M + G   + ++Y+ L  GF  + +I  A ++  
Sbjct: 225 SFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFF 284

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           ++   G  PD+ TYTVL+  +C++G   E LK  E M+  G + NV  Y+VL+   CK G
Sbjct: 285 QMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVG 344

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           ++DE + +L  M   GL   +V ++ LI G CK+  +  AI + + M   ++ PNS  + 
Sbjct: 345 KMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYN 404

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++ G C K+ +  A    + +  +    ++V YN +I G  K   +  A +L+  +I+ 
Sbjct: 405 ELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKD 464

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P   TF + I   CK GKV  A ++ +++K    E +   YT  ++ YC+       
Sbjct: 465 GFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDA 524

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             L + M  +   P  +T+ V++ GL K+ K+++A+ L++ M      P   TY  +I  
Sbjct: 525 HLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEE 584

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
             +  D  +A   L+QM     +P   TY   I   C  G L  A+ ++V ++E  I L 
Sbjct: 585 ILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLD 644

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
              Y  ++ A+   G +  A     +M + G E S + Y+
Sbjct: 645 SFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYS 684



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 160/614 (26%), Positives = 289/614 (47%), Gaps = 35/614 (5%)

Query: 30  SIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           ++ +Y  LL+ L     +       + +E  RN    S V           +A   L   
Sbjct: 102 TVHSYQPLLFILVRNGFL-------RAAENVRNSMIKSCVSS--------HEARFVLNLL 146

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
              EF  SV S N +     + G  +    LF  ML  G+ P+  S+N +++  C  G++
Sbjct: 147 THHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNV 206

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
             A  +   + + G   D+ TY+ L  G+  + ++  A+KV + +  +G   + V+YT L
Sbjct: 207 VVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNL 266

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G+C++G ++E L+L   M   G   +V  Y+VL+++ C+ G+  EAL    EM   G+
Sbjct: 267 IHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGI 326

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           +P++ TY++LI   CK  K+ + +++ + M  K +  +     A++ G C++ M+ +A  
Sbjct: 327 EPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAIC 386

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             DS+ ++    +   YN +I G+ +  ++  A+ L  ++ E ++SP++VT+N+LI+G C
Sbjct: 387 VLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLC 446

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K   V  A RL   +   G  P   T+  F++  C+ G +++   + + ++ K       
Sbjct: 447 KARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEF 506

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            YT +I G CK  K  +A  L + M   G  P+ IT+N ++    K   +  A  L++ M
Sbjct: 507 LYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVM 566

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
              + +PT  TY ILI+ +    D   A+  L  +         V YT  IKA+C +G +
Sbjct: 567 GKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRL 626

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
            +A     ++ E+G  +                    D  I +V++ A+   G L S F 
Sbjct: 627 LEAEEMVVKIKEEGILL--------------------DSFIYDVLVNAYGCIGQLDSAFG 666

Query: 630 LAAVMIKSGLLPDK 643
           +   M  +G  P +
Sbjct: 667 VLIRMFDTGCEPSR 680



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 148/620 (23%), Positives = 275/620 (44%), Gaps = 46/620 (7%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D   +L+  +K      +V T ++++   C+  +  +A+ F +E       P+V +   +
Sbjct: 277 DEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVL 336

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +  +CK+G  +    +   ML+ GL      +N LI G C  G ME+A+   + M  + V
Sbjct: 337 IDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKV 396

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            P++ TY+ L  GF     +  A  ++ K+      P++VTY  LI G C+   V+   +
Sbjct: 397 CPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWR 456

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L  +M+  GF  +   +   +  +CK G++++A  +   ++    + +   Y+ LI G C
Sbjct: 457 LHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYC 516

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K +K   A  L+  M  +   PNS     +L GL ++  + +A    D +   +    V 
Sbjct: 517 KAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVH 576

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            Y I+I+  ++  +   A     Q+I     P++VT+ + I  +C+ G++ +A  ++  I
Sbjct: 577 TYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKI 636

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ--- 461
           K  G+   +  Y   +NAY   G +     +L  M      P+  TY++++K L  +   
Sbjct: 637 KEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYN 696

Query: 462 --------------------WKLQE---AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
                               WK+ +      L E M   G  P+  TY+ +I+  CK + 
Sbjct: 697 KEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEH 756

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L  AF+L N M    + P+   +N L+   C  G  + A  LL S+ E+N          
Sbjct: 757 LSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYN---------- 806

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAF 618
               H A  + +K +   C + E+G +    +  +  F  +LS G+  D+ + +V+L   
Sbjct: 807 ----HLAHLESYKLLV--CGLFEQGNQ----EKAEEIFRSLLSCGYNYDEVVWKVLLDGL 856

Query: 619 HQGGDLGSVFELAAVMIKSG 638
            + G +    +L  +M K+G
Sbjct: 857 VRKGYVDECSQLRDIMEKTG 876



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/516 (25%), Positives = 239/516 (46%), Gaps = 21/516 (4%)

Query: 148 SMEEALEFTNDMGRHGVEPDAITYS---ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
           S  EA    N +  H       +Y+   ++   F L+ +++  +K    +L  G +P+++
Sbjct: 135 SSHEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFK---DMLNDGVEPNLI 191

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           ++  ++  +C+IGNV         ++  GF  +   Y+ L+   CK   + +A  +   M
Sbjct: 192 SFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIM 251

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              G   + V+Y+ LI G C+  K+ +A++L+ +M      P+   +  ++   CE    
Sbjct: 252 PQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKE 311

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
           TEA  +F+ ++ +    +V  Y ++ID + K+G + E +++   ++EK +  S+V FN+L
Sbjct: 312 TEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNAL 371

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G+CK G + DA  +LD++KL+ + P++ TY   +  +C + ++ R +ALL +M    +
Sbjct: 372 IDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKL 431

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  VTY  +I GLCK   +  A +L   M   G  PDQ T+   I   CK   + +A Q
Sbjct: 432 SPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQ 491

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           +   +   + E     Y  LIDG C      +A  L   +         + +  ++    
Sbjct: 492 VFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLR 551

Query: 565 AEGDVHKAMTF---------------FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
            EG V  AM+                +  ++E+    S  D    F   M+S+G  P+  
Sbjct: 552 KEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVV 611

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                + A+ + G L    E+   + + G+L D F+
Sbjct: 612 TYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFI 647



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 130/511 (25%), Positives = 231/511 (45%), Gaps = 47/511 (9%)

Query: 6   YSRTGMVHDAVFVIAKMK-----------------------------------ELDLKVS 30
           Y + GM+ DA+ V+  MK                                   E  L  +
Sbjct: 375 YCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPN 434

Query: 31  IQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           + TYN+L++ L   R  D  W L+  +       +  T    ID LC+  +++ A    +
Sbjct: 435 LVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFE 494

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
               K    +     A++  YCK      A  LF  ML  G  P++ ++N+L+ GL   G
Sbjct: 495 SLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEG 554

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            +E+A+   + MG+   +P   TY+IL +     S    A   + +++  G  P++VTYT
Sbjct: 555 KVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYT 614

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
             I  YC+ G + E  ++   +  +G  L+   Y VL+++    G++D A G+L  M   
Sbjct: 615 AFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDT 674

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G +P   TYSIL++ L  +    + + L  ++ S  IS ++    A +  + + E+IT  
Sbjct: 675 GCEPSRQTYSILLKHLIFEKYNKEGMGL--DLNSTNISVDN----ANIWKIADFEIIT-- 726

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
            M F+ ++   C+ +V  Y+ +I G  K+ ++  A +L+  + E  ISPS    NSL+  
Sbjct: 727 -MLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSS 785

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G   +A RLLD++  +       +Y   +    E+GN ++   + + + +      
Sbjct: 786 CCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYD 845

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            V + V++ GL ++  + E  QL + M   G
Sbjct: 846 EVVWKVLLDGLVRKGYVDECSQLRDIMEKTG 876



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 206/476 (43%), Gaps = 64/476 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + R   +  A+ ++ KM E  L  ++ TYN+L++ L   R  D  W L+  +       +
Sbjct: 410 FCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPD 469

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T    ID LC+  +++ A    +    K    +     A++  YCK      A  LF 
Sbjct: 470 QRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFK 529

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML  G  P++ ++N+L+ GL   G +E+A+   + MG+   +P   TY+IL +     S
Sbjct: 530 RMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRES 589

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               A   + +++  G  P++VTYT  I  YC+ G + E  ++   +  +G  L+   Y 
Sbjct: 590 DFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYD 649

Query: 243 VLLSSMCKSGRIDEALGLL--------------------------YEMEAVGLK------ 270
           VL+++    G++D A G+L                          Y  E +GL       
Sbjct: 650 VLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNI 709

Query: 271 -----------------------------PDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
                                        P++ TYS LI+GLCK + +  A +L+N M  
Sbjct: 710 SVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKE 769

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             ISP+   H ++L   C+  M  EA    DS++  N +  +  Y +++ G  + GN  +
Sbjct: 770 SGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEK 829

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           A +++R L+    +   V +  L+ G  + G V +  +L D ++  G    + T+T
Sbjct: 830 AEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHT 885



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 24/291 (8%)

Query: 3   AFV--YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           AF+  Y R G + +A  ++ K+KE  + +     +S +Y     D++ + Y  I   ++ 
Sbjct: 615 AFIKAYCRQGRLLEAEEMVVKIKEEGILL-----DSFIY-----DVLVNAYGCIGQLDSA 664

Query: 61  RNVYTNSIVIDGLCQQSRLQDAIL--------FLQETAGKEFGPSVVSLNAIMSRYCKLG 112
             V     + D  C+ SR   +IL        + +E  G +   + +S++   +   K+ 
Sbjct: 665 FGVLIR--MFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDN--ANIWKIA 720

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
             E+   LF  M++ G  P+  +Y+ LI GLC    +  A    N M   G+ P    ++
Sbjct: 721 DFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHN 780

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L      L     A +++  ++       + +Y +L+CG  + GN E+  ++   +LS 
Sbjct: 781 SLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSC 840

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           G+  + + + VLL  + + G +DE   L   ME  G +    T+++L + L
Sbjct: 841 GYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQEL 891


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 165/577 (28%), Positives = 284/577 (49%), Gaps = 43/577 (7%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +L++ +K      +V+  +++IDGLC+  R+ DA     E   +   PS+++ N ++  Y
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK G  E +  +   M    + P   ++N L+ GL  AG +E+A     +M   G  PDA
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319

Query: 169 ITYSILAKGFH-----------------------------LLS------QISGAWKVIQK 193
            T+SIL  G+                              LL+      +I  A +++ +
Sbjct: 320 FTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGR 379

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR-EVMLSQGFKLNVIAYSVLLSSMCKSG 252
            + KG  P+ V Y  +I GYC+ G++  G +++ E M  QG K + +AY+ L+   C+ G
Sbjct: 380 EMAKGLVPNEVIYNTMIDGYCRKGDLV-GARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            ++ A   + +M+  G+ P + TY+ILI G  ++ +  K   +  EM      PN  ++G
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC+   + EA++    +        V +YN++IDG    G I +A +  +++++K
Sbjct: 499 TLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            I  ++VT+N+LI G    GK+++A  LL  I   GL+P   TY + ++ Y   GN+QR 
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRC 618

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY-VIGVTPDQITYNTIIR 491
           +AL +EM+   I PT  TY ++I  LC +    E ++L E ++  + + PD + YN ++ 
Sbjct: 619 IALYEEMKRSGIKPTLKTYHLLI-SLCTK----EGIELTERLFGEMSLKPDLLVYNGVLH 673

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            +    D+ KAF L  QM   ++     TYN LI G    G L     L+  +    +  
Sbjct: 674 CYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEP 733

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
               Y  I+K HC   D   A  ++ +M EKGF + +
Sbjct: 734 EADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDV 770



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/566 (26%), Positives = 260/566 (45%), Gaps = 17/566 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS  SL  ++    K     V   +F  +L+    P  F Y   I        + + LE 
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            N M    + P    Y++L  G     +++ A ++  ++L +   P ++TY  LI GYC+
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            GN E+  K+RE M +   + ++I ++ LL  + K+G +++A  +L EM+ +G  PD  T
Sbjct: 262 AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           +SIL  G    +K   A+ +Y       +  N++    +L  LC++  I +A       +
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
               + + V+YN MIDGY + G++  A      + ++ + P  + +N LI  FC+ G++ 
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A + ++ +KL G+ PS  TY   +  Y  +    +   +L+EME     P  V+Y  +I
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             LCK  KL EA  +  DM   GV+P    YN +I   C    +  AF+   +M    +E
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
               TYN LIDGL + G L  A+ LL+ +    +      Y ++I  +   G+V + +  
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621

Query: 576 FCQMVEKGFEISIRDY--------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQG 621
           + +M   G + +++ Y              T+  F  M      PD  +   +L  +   
Sbjct: 622 YEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVH 678

Query: 622 GDLGSVFELAAVMIKSGLLPDKFLIN 647
           GD+   F L   MI+  +  DK   N
Sbjct: 679 GDMEKAFNLQKQMIEKSIGLDKTTYN 704



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 239/542 (44%), Gaps = 77/542 (14%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---------------- 49
           Y + G    +  V  +MK   ++ S+ T+N+LL  L    ++ D                
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318

Query: 50  ------LYDDIKVSETPR----------------NVYTNSIVIDGLCQQSRLQDAILFLQ 87
                 L+D    +E                   N YT SI+++ LC++ +++ A   L 
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
               K   P+ V  N ++  YC+ G    A+     M K G+ PD  +YN LI   C  G
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT-- 205
            ME A +  N M   GV P   TY+IL  G+    +    + +++++   G+ P++V+  
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498

Query: 206 ---------------------------------YTVLICGYCQIGNVEEGLKLREVMLSQ 232
                                            Y +LI G C  G +E+  +  + ML +
Sbjct: 499 TLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G +LN++ Y+ L+  +  +G++ EA  LL E+   GLKPD+ TY+ LI G      V + 
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRC 618

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           I LY EM    I P +     +L+ LC KE I      F  + +     D+++YN ++  
Sbjct: 619 IALYEEMKRSGIKP-TLKTYHLLISLCTKEGIELTERLFGEMSLK---PDLLVYNGVLHC 674

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           Y   G++ +A  L +Q+IEK I     T+NSLI G  K GK+ + R L+D +    +EP 
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
           A TY   +  +CE  +        +EM+ K           ++ GL ++W+ +EA  ++ 
Sbjct: 735 ADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVIS 794

Query: 473 DM 474
           +M
Sbjct: 795 EM 796



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 141/543 (25%), Positives = 256/543 (47%), Gaps = 7/543 (1%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           ++DA  +  +M    L  S+ TYN+L+       + +  + + + +K      ++ T + 
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++ GL +   ++DA   L+E     F P   + + +   Y     AE A G++   +  G
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           +  +A++ +IL++ LC  G +E+A E        G+ P+ + Y+ +  G+     + GA 
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
             I+ +  +G  PD + Y  LI  +C++G +E   K    M  +G   +V  Y++L+   
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
            +    D+   +L EME  G  P++V+Y  LI  LCK  K+ +A  +  +M  + +SP  
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  ++ G C K  I +A  +   ++      ++V YN +IDG    G + EA  L  +
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  K + P + T+NSLI G+   G V     L + +K  G++P+  TY   ++   +EG 
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG- 648

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           I+    L  EM  K   P  + Y  V+        +++A  L + M    +  D+ TYN+
Sbjct: 649 IELTERLFGEMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNS 705

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I    K   L +   L+++M    +EP + TYNI++ G C   D  +A      +QE  
Sbjct: 706 LILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765

Query: 549 ISL 551
             L
Sbjct: 766 FLL 768



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 224/514 (43%), Gaps = 20/514 (3%)

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
           FSY +L   L  +  + EA +    +   G+ P + + ++L        Q      V   
Sbjct: 110 FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +L     P    Y   I    ++ +V +GL+L   M       +V  Y+VL+  +CK  R
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +++A  L  EM A  L P L+TY+ LI G CK     K+ ++   M +  I P+      
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           +L GL +  M+ +A      +     + D   ++I+ DGY        A+ +Y   ++  
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           +  +  T + L+   CK GK+  A  +L      GL P+ V Y T ++ YC +G++    
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
             ++ ME + + P H+ Y  +I+  C+  +++ A + +  M + GV+P   TYN +I  +
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
            +  +  K F +L +M  +   P   +Y  LI+ LC    L  A  +   +++  +S   
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
             Y  +I   C++G +  A  F  +M++KG E+++  Y                      
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYN--------------------T 569

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           ++      G L    +L   + + GL PD F  N
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYN 603


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 237/459 (51%), Gaps = 15/459 (3%)

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           +G  PD+V+Y+ +I GYC  G +++ LKL + M  +G K N+  Y+ ++  +CKSG++D+
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A  +L EM   G+ PD V Y+ LI G CK   +  A +L++EM  +RI P+  A+ A++ 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           GLC    + EA   F+ +       D V Y  +IDGY K G + +A  L+ Q+++  ++P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           ++VT+ +L  G CK G+V  A  LL  +   GL+ +  TY + +N  C+ GNI++ + L+
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           +EME   + P  +T+T ++   CK  ++ +A +LL +M   G+ P  IT+N ++  FC  
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
             L    +LL  M    + P + TYN L+   C+  +++    +   +    +      Y
Sbjct: 304 GMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTY 363

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLS 601
             +IK HC   ++ +A     +M EKGF ++   Y                +  F  M  
Sbjct: 364 NILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRR 423

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
            G   D EI  + +   +  G++ +  EL    I++  L
Sbjct: 424 EGMAADAEIYNLFVDISYGEGNMETALELCDEAIENCFL 462



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 243/457 (53%), Gaps = 35/457 (7%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  PD  SY+ +I+G C+ G +++ L+   +M   G++P+  TY+ +        ++  A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            +V+++++ +G  PD V YT LI G+C++GN++   KL + M  Q    + IAY+ ++  
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C+ G++ EA  +  +M + G++PD VTY+ LI G CK  ++ KA  L+N+M    ++PN
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
                                              VV Y  + DG  KLG +  A +L  
Sbjct: 185 -----------------------------------VVTYTALADGLCKLGQVDTANELLH 209

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++  K +  +I T+NSL+ G CK+G +  A +L++ +++ G+ P  +T+TT M+AYC+ G
Sbjct: 210 EMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTG 269

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            + +   LL+EM  + + PT +T+ V++ G C    L++  +LL  M   G+ P+  TYN
Sbjct: 270 EMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYN 329

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           ++++ +C   ++R   ++   M    + P S TYNILI G C   ++K A  L   + E 
Sbjct: 330 SLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEK 389

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             +LT  +Y +IIK    +  + +A   F +M  +G 
Sbjct: 390 GFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGM 426



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 239/443 (53%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
            P VVS + +++ YC  G  +    L   M   GL P+ ++YN +I  LC +G +++A  
Sbjct: 7   APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
              +M   G+ PD + Y+ L  GF  L  I  A+K+  ++  +   PD + YT +ICG C
Sbjct: 67  VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           + G + E  K+   M S+G + + + Y+ L+   CKSG +++A  L  +M   GL P++V
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+ L  GLCK  +V  A +L +EMC K +  N   + +++ GLC+   I +A    + +
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
            ++    D + +  ++D Y K G + +A +L R+++++ + P+++TFN L+ GFC +G +
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGML 306

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            D  RLL  +   G+ P+  TY + M  YC   N++    + + M  + + P   TY ++
Sbjct: 307 EDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNIL 366

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           IKG CK   ++EA  L ++M   G      +YN+II+ F K K + +A +L  +M    +
Sbjct: 367 IKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGM 426

Query: 515 EPTSATYNILIDGLCVNGDLKNA 537
              +  YN+ +D     G+++ A
Sbjct: 427 AADAEIYNLFVDISYGEGNMETA 449



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 212/429 (49%), Gaps = 35/429 (8%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+YT + +I  LC+  ++ DA   L+E   +   P  V    ++  +CKLG  + A  LF
Sbjct: 44  NLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLF 103

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M K  + PD  +Y  +I GLC  G M EA +  N M   GVEPD +TY+ L  G+   
Sbjct: 104 DEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKS 163

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A+ +  +++  G  P++VTYT L  G C++G V+   +L   M  +G +LN+  Y
Sbjct: 164 GEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTY 223

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L++ +CKSG I +A+ L+ EME  G+ PD +T++ L+   CK  ++ KA +L  EM  
Sbjct: 224 NSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLD 283

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + + P                                    V+ +N++++G+   G + +
Sbjct: 284 RGLQPT-----------------------------------VITFNVLMNGFCMSGMLED 308

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
             +L   ++EK I P+  T+NSL+  +C    +     +   +   G+ P + TY   + 
Sbjct: 309 GERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIK 368

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C+  N++    L +EM  K    T  +Y  +IKG  K+ K+ EA +L E+M   G+  
Sbjct: 369 GHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAA 428

Query: 482 DQITYNTII 490
           D   YN  +
Sbjct: 429 DAEIYNLFV 437



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 215/472 (45%), Gaps = 75/472 (15%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPR 61
           Y   G +   + +I +M+   LK ++ TYNS++  L  +  + D    L + I     P 
Sbjct: 20  YCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPD 79

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V   ++ IDG C+   +Q A     E   +   P  ++  A++   C+ G    A  +F
Sbjct: 80  TVVYTTL-IDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVF 138

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G+ PD  +Y  LI G C +G ME+A    N M + G+ P+ +TY+ LA G   L
Sbjct: 139 NKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKL 198

Query: 182 SQI-------------------------------SG----AWKVIQKLLIKGSDPDIVTY 206
            Q+                               SG    A K+++++ + G  PD +T+
Sbjct: 199 GQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITF 258

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T L+  YC+ G + +  +L   ML +G +  VI ++VL++  C SG +++   LL  M  
Sbjct: 259 TTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLE 318

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G+ P+  TY+ L++  C ++ +    ++Y  MC++ + P+S  +               
Sbjct: 319 KGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTY--------------- 363

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
                               NI+I G+ K  N+ EA  L++++ EK  + +  ++NS+I 
Sbjct: 364 --------------------NILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIK 403

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           GF K  K+++AR L + ++  G+   A  Y  F++    EGN++  L L  E
Sbjct: 404 GFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDE 455



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 105/189 (55%)

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +K  G  P  V+Y+T +N YC  G +Q++L L+QEM+ K + P   TY  +I  LCK  K
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           + +A ++L +M   G+ PD + Y T+I  FCK  +++ A++L ++M    + P    Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +I GLC  G +  AD +   +    +   +V YTT+I  +C  G++ KA +   QMV+ G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 584 FEISIRDYT 592
              ++  YT
Sbjct: 181 LTPNVVTYT 189



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 20/204 (9%)

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M+ +   P  V+Y+ VI G C   +LQ+ ++L+++M + G+ P+  TYN+II   CK   
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           +  A ++L +M    + P +  Y  LIDG C  G+++ A  L   +++  I    +AYT 
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAF 618
           +I   C  G + +A                       F  M S G  PD+     ++  +
Sbjct: 121 VICGLCRCGKMMEA--------------------DKVFNKMFSRGVEPDEVTYTTLIDGY 160

Query: 619 HQGGDLGSVFELAAVMIKSGLLPD 642
            + G++   F L   M++SGL P+
Sbjct: 161 CKSGEMEKAFSLHNQMVQSGLTPN 184


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 159/600 (26%), Positives = 293/600 (48%), Gaps = 26/600 (4%)

Query: 53  DIKVSETPRNVY----TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DI V  + R V+    T ++++  L + + L  +     + A +   P V +    ++ +
Sbjct: 207 DIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAF 265

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK G    A  LFC M   G+ P+  +YN +I GL  +G  EEAL F + M R  V P  
Sbjct: 266 CKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSV 325

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +TY +L  G   L     A +V+ ++   G  P+ V +  LI GYC+ G++ E L++R+ 
Sbjct: 326 VTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDE 385

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M  +G K N + ++ LL   C+S ++++A  +L  + + GL  ++   S +I  L ++  
Sbjct: 386 MAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSG 445

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA-RMYFDSLIMSNCIQDVVLYN 347
              A+++  ++ S  I  +      +++GLC+ E  +EA  ++F    +     + V  N
Sbjct: 446 FVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSN 505

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            ++ G  + GN+ E  ++ +Q++EK +    +++N+LI+G CK GK+ +A +L + +   
Sbjct: 506 ALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQ 565

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
             +P   TY   M    + G I  +  LL E +     P   TY ++++G CK  ++++A
Sbjct: 566 EFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDA 625

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           V+  +++    V    + YN +I ++C+  ++ +AF+L + M    + PT ATY+ LI G
Sbjct: 626 VKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHG 685

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           +C  G +  A  +   ++   +      YT +I  HC  G +                  
Sbjct: 686 MCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQM------------------ 727

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             D   S    M SNG  P++    +M+  + + G++    EL   MI++G+ PD    N
Sbjct: 728 --DIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYN 785



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 158/548 (28%), Positives = 260/548 (47%), Gaps = 71/548 (12%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + VIDGL +  R ++A+ F       +  PSVV+   ++S   KL   E A  + 
Sbjct: 289 NVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVL 348

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF--- 178
             M   G  P+   +N LI G C  G M EAL   ++M   G++P+ +T++ L +GF   
Sbjct: 349 VEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRS 408

Query: 179 -----------------------------HLLSQISG---AWKVIQKLL----------- 195
                                        H L + SG   A K++ KLL           
Sbjct: 409 NQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLL 468

Query: 196 -------------------------IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
                                    +KG   + VT   L+ G C+ GN+EE  ++ + ML
Sbjct: 469 TPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQML 528

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +G  L+ I+Y+ L+   CK G+I+EA  L  EM     +PD  TY+ L++GL    K+ 
Sbjct: 529 EKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKID 588

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
              +L +E       PN + +  +L G C+ + I +A  +F +L         V+YNI+I
Sbjct: 589 DVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILI 648

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
             Y ++GN+ EA +L   +  + I P+  T++SLI+G C  G+V +A+ + + ++  GL 
Sbjct: 649 AAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLL 708

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+   YT  +  +C+ G +  + ++L EM +  I P  +TYT++I G CK   ++EA +L
Sbjct: 709 PNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEAREL 768

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L +M   G+ PD +TYN + + +CK ++L    Q  ++  +        TYN LI  L  
Sbjct: 769 LNEMIRNGIAPDTVTYNALQKGYCKERELTVTLQSDHKSNIGLPLEEEITYNTLIHKLHP 828

Query: 531 NGDLKNAD 538
           +  + N +
Sbjct: 829 HTAISNRE 836



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 160/598 (26%), Positives = 277/598 (46%), Gaps = 80/598 (13%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
            + + G V DAV +  KM+ L +  ++ TYN+                            
Sbjct: 264 AFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNN---------------------------- 295

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
               VIDGL +  R ++A+ F       +  PSVV+   ++S   KL   E A  +   M
Sbjct: 296 ----VIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEM 351

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF------ 178
              G  P+   +N LI G C  G M EAL   ++M   G++P+ +T++ L +GF      
Sbjct: 352 YSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQM 411

Query: 179 --------------------------HLLSQISG---AWKVIQKLL---IKGSDPDIVTY 206
                                     H L + SG   A K++ KLL   I+ SD  +   
Sbjct: 412 EQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLL--- 468

Query: 207 TVLICGYCQIGNVEEGLKLR-EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           T L+ G C+     E ++L  ++   +G   N +  + LL  +C+ G ++E   +L +M 
Sbjct: 469 TPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQML 528

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             GL  D ++Y+ LI G CK  K+ +A +L  EM  +   P+++ +  ++ GL +   I 
Sbjct: 529 EKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKID 588

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +             + +V  Y ++++GY K   I +AV+ ++ L  +++  S V +N LI
Sbjct: 589 DVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILI 648

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
             +C+ G V +A +L D +K  G+ P+  TY++ ++  C  G +     + +EM  + + 
Sbjct: 649 AAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLL 708

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P    YT +I G CK  ++     +L +M   G+ P++ITY  +I  +CK  ++++A +L
Sbjct: 709 PNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEAREL 768

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT---KVAYTTII 560
           LN+M  + + P + TYN L  G C   +L      L S  + NI L    ++ Y T+I
Sbjct: 769 LNEMIRNGIAPDTVTYNALQKGYCKERELT---VTLQSDHKSNIGLPLEEEITYNTLI 823



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 32/210 (15%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           +L   Y R G V +A  +   MK   +  +  TY+SL                       
Sbjct: 646 ILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSL----------------------- 682

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
                    I G+C   R+ +A    +E   +   P+V    A++  +CKLG  ++   +
Sbjct: 683 ---------IHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSI 733

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M   G+ P+  +Y I+I G C  G+M+EA E  N+M R+G+ PD +TY+ L KG+  
Sbjct: 734 LLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCK 793

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
             +++   +   K  I     + +TY  LI
Sbjct: 794 ERELTVTLQSDHKSNIGLPLEEEITYNTLI 823


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 259/529 (48%), Gaps = 8/529 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y R G    A+    +M++  +K +++ YN +L  L       ++  +Y ++K      N
Sbjct: 121 YRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPN 180

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+T +I++  LC+ +R+  A   L E + K   P  VS   ++S  CKLG  + A+    
Sbjct: 181 VFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE--- 237

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             L     P    YN LI+G+C   + EEA +  ++M   G++P+ I+Y+ +        
Sbjct: 238 --LAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAG 295

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  +  V+ K+  +G  P++ T+T LI G+   G   E L   + M+ +G   NV+AY+
Sbjct: 296 NVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYN 355

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +C    + +A+ +  +ME  G  P++ TYS LI G  K   +  A +++N M + 
Sbjct: 356 ALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITH 415

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              PN  A+  ++  LC   M  +A    +++ + NC  + V +N  I G    G +  A
Sbjct: 416 GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWA 475

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++++ Q+      P+  T+N L+    K+ +  +A  L+  ++  G+E + VTY T +  
Sbjct: 476 IKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYG 535

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC  G +   L LL +M  +   P  +T  +VI   CKQ K+  A+QL++ +      PD
Sbjct: 536 YCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPD 595

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            I Y ++I   C    + +A   L +M    + P  AT+N+L+  L  N
Sbjct: 596 IIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSN 644



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/560 (26%), Positives = 277/560 (49%), Gaps = 15/560 (2%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+V   N I+         ++   ++  M K G+ P+ F+YNIL+  LC    ++ A + 
Sbjct: 144 PTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKL 203

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M   G +PD ++Y+ L      L ++  A ++          P +  Y  LI G C+
Sbjct: 204 LVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGVCK 258

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
               EE  +L + M+++G   NVI+Y+ +++++  +G ++ +L +L +M A G  P+L T
Sbjct: 259 EYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHT 318

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ LI+G   +   H+A+  ++ M  + + PN  A+ A++ GLC K  + +A   F+ + 
Sbjct: 319 FTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQME 378

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
           ++ C  +V  Y+ +IDGY K G++  A +++  +I     P++V +  ++   C+N    
Sbjct: 379 INGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFN 438

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L++ +++    P+ VT+ TF+   C  G +   + +  +M      P   TY  ++
Sbjct: 439 QAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELL 498

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             L K  +  EA  L++DM   G+  + +TYNTII  +C    L +A +LL +M +   +
Sbjct: 499 DSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTK 558

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P + T NI+ID  C  G +  A  L+  L         +AYT++I   C    V +A+ +
Sbjct: 559 PDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVY 618

Query: 576 FCQMVEKGFEISIRDYT---KSFFCMMLSNG---FPPDQEICE----VMLIAFHQGGDLG 625
             +M+ +G   ++  +    +  F  M  +G   F     I +    V++I    GG L 
Sbjct: 619 LRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDASSIMQPKFVVLIITKEAGGQLH 678

Query: 626 SVFELAAVMIKSGLLPDKFL 645
           SV  + + + ++    ++FL
Sbjct: 679 SVSSMGSPVERAICAKNQFL 698



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 218/494 (44%), Gaps = 20/494 (4%)

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +TY ++ +      ++     ++Q++ ++G       +  +I  Y + G+ E+ LK    
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M     K  V  Y+ +L ++    R      +   M+  G++P++ TY+IL++ LCK ++
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V  A +L  EM SK   P+  ++  ++  LC+   + EAR    S   S     V +YN 
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPS-----VPVYNA 251

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I+G  K     EA QL  +++ K I P+++++ ++I      G V  +  +L  +   G
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
             P+  T+T+ +  +  +G     L     M  + + P  V Y  ++ GLC +  L +AV
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAV 371

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            +   M + G  P+  TY+ +I  + K  DL  A ++ N M  H   P    Y  ++D L
Sbjct: 372 SVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVL 431

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C N     A CL+ ++Q  N     V + T IK  C  G V  A+  F QM   G   + 
Sbjct: 432 CRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNT 491

Query: 589 RDYTKSFFCMMLSNGFPP--------DQEICEVMLIAFHQ-------GGDLGSVFELAAV 633
             Y +    ++    F          +    E+ L+ ++         G LG   EL   
Sbjct: 492 TTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGK 551

Query: 634 MIKSGLLPDKFLIN 647
           M+  G  PD   +N
Sbjct: 552 MVVRGTKPDAITVN 565



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 164/342 (47%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N++T + +I G   +    +A+ F      +   P+VV+ NA+M   C       A  +F
Sbjct: 315 NLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVF 374

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G  P+  +Y+ LI G   AG ++ A E  N M  HG  P+ + Y+ +       
Sbjct: 375 NQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRN 434

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           S  + A+ +I+ + ++   P+ VT+   I G C  G V+  +K+ + M + G   N   Y
Sbjct: 435 SMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTY 494

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL S+ K  R  EA GL+ +ME  G++ +LVTY+ +I G C    + +A++L  +M  
Sbjct: 495 NELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVV 554

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +   P++     ++   C++  +  A    D L       D++ Y  +I G      + E
Sbjct: 555 RGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEE 614

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           A+   R+++ + ISP++ T+N L+     N   + A + LD 
Sbjct: 615 AIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDA 656


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 249/461 (54%), Gaps = 4/461 (0%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +++S TP  +  N I +  L + +    AI   ++       PS+V+L  +M+ YC  G 
Sbjct: 2   LQISPTPPILQFNHI-LASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
                 +   +LK G  P++ ++  LI G+C+ G   EAL F + +  HG + D ++Y+I
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L  G   + +   A ++++K  +   + D+V Y+ +I   C+   V +  +L   M+++G
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTWV---NADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              NV  +S+L+ ++CK  +  +A+ LL  M   G+KP++VTY  ++ G C  ++V+KA+
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            ++N M  + + PN + +  I+ GLC+K+ + EA   F  +       DVV YNI+IDG 
Sbjct: 238 NIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGL 297

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            KLG I  +++L  ++     +  I+T+NSL++  CKN  +  A  L+  IK  G++P+ 
Sbjct: 298 CKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNV 357

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            TYTT ++  C++G ++    + QE+ T+    T  TY V+I GLCK+    EA+ LL  
Sbjct: 358 CTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSR 417

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           M      PD ++Y TII +  +  +  K  +LL  M +  L
Sbjct: 418 MEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGL 458



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 234/468 (50%), Gaps = 7/468 (1%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           ML+    P    +N ++  L        A+     +  +G++P  +T +IL   +     
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I+  + ++ K+L  G +P+ +T+T LI G C  G   E L   + +++ GFKL+ ++Y++
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++ +CK G    A+ +L       +  D+V YS +I  LCK   V  A +LY+EM +K 
Sbjct: 121 LMNGLCKMGETRAAMQML---RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I PN +    ++  LC+     +A      ++      +VV Y  ++DGY  +  + +A+
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            ++  ++++ + P++  +N +I G CK  +V +A  L   +    + P  VTY   ++  
Sbjct: 238 NIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGL 297

Query: 424 CEEGNIQRLLALLQEMETKAIGPTH--VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           C+ G I   L L+ EM  ++IG T   +TY  ++  LCK   L +A+ L++++   G+ P
Sbjct: 298 CKLGKISTSLELVDEM--RSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQP 355

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +  TY T+I   CK   L  A+ +  ++       T  TYN++I+GLC  G    A  LL
Sbjct: 356 NVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALL 415

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             ++++      V+Y TII A   +G+  K     C M+ +G    ++
Sbjct: 416 SRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLK 463



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 257/514 (50%), Gaps = 23/514 (4%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P ++  N I++   K+     A  LF  +   G+ P   +  IL++  C  G +      
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              + + G EP++IT++ L KG  L  Q   A      ++  G   D V+Y +L+ G C+
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 216 IGNVEEGLK-LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           +G     ++ LR+  ++     +V+ YS ++ S+CK   + +A  L  EM A G+ P++ 
Sbjct: 128 MGETRAAMQMLRKTWVNA----DVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVY 183

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           T+SIL+  LCK  K  +A+ L   M  K + PN   +GAI+ G C    + +A   F+ +
Sbjct: 184 TFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVM 243

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           +      +V  YNI+I+G  K   + EA+ L++++  K+I+P +VT+N LI G CK GK+
Sbjct: 244 VQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKI 303

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
           + +  L+D ++  G     +TY + ++A C+  ++ + + L++E++ + I P   TYT +
Sbjct: 304 STSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTL 363

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I GLCK  +L++A  + +++   G      TYN +I   CK     +A  LL++M  +  
Sbjct: 364 IDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNAC 423

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS---LTKVAYTTIIK--------AH 563
            P + +Y  +I  L   G+    + LL ++    +S     KV  TTI          A 
Sbjct: 424 IPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLKKKVNMTTIADLNDKWAAYAS 483

Query: 564 CAEGDVH-------KAMTFFCQMVEKGFEISIRD 590
             +G +H       K ++  C    +G +I+ R+
Sbjct: 484 LEDGMIHPIFLMLLKCLSIKCSGSMEGVDITGRE 517



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 221/489 (45%), Gaps = 53/489 (10%)

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           P  + ++ +      ++    A  + ++L   G  P IVT T+L+  YC  G +     +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
              +L  G++ N I ++ L+  MC +G+  EAL     + A G K D V+Y+IL+ GLCK
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
             +   A+Q+      ++   N+                                 DVV+
Sbjct: 128 MGETRAAMQML-----RKTWVNA---------------------------------DVVM 149

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y+ +ID   K   + +A +LY ++I K I P++ TF+ L+   CK+ K   A  LL  + 
Sbjct: 150 YSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMM 209

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             G++P+ VTY   M+ YC    + + L +   M  + + P    Y ++I GLCK+ ++ 
Sbjct: 210 KKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVD 269

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA+ L ++M+   + PD +TYN +I   CK   +  + +L+++M          TYN L+
Sbjct: 270 EAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLL 329

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
             LC N  L  A  L+  +++  I      YTT+I   C +G +  A   F +++ +G+ 
Sbjct: 330 HALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYH 389

Query: 586 ISIRDYT--------KSFF-------CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
           I++  Y         K  F         M  N   PD    E ++ A  + G+     +L
Sbjct: 390 ITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKL 449

Query: 631 AAVMIKSGL 639
              MI  GL
Sbjct: 450 LCAMIVRGL 458



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 150/274 (54%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           + LY ++       NVYT SI++D LC+  + + A+  L     K   P+VV+  AIM  
Sbjct: 167 YRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDG 226

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           YC +     A  +F +M++ G+ P+ + YNI+I+GLC    ++EA+    +M    + PD
Sbjct: 227 YCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPD 286

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            +TY+IL  G   L +IS + +++ ++   G   DI+TY  L+   C+  ++++ + L +
Sbjct: 287 VVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVK 346

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            +  QG + NV  Y+ L+  +CK GR+++A  +  E+   G    + TY+++I GLCK+ 
Sbjct: 347 EIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKG 406

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
              +A+ L + M      P++ ++  I+  L EK
Sbjct: 407 LFDEALALLSRMEDNACIPDAVSYETIIYALSEK 440



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 129/262 (49%), Gaps = 3/262 (1%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A+ ++A M +  +K ++ TY +++     +   +   ++++ +       NV+  +I+I+
Sbjct: 201 AMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIIN 260

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           GLC++ R+ +A+   +E   K+  P VV+ N ++   CKLG    +  L   M   G   
Sbjct: 261 GLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTV 320

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  +YN L+H LC    +++A+    ++   G++P+  TY+ L  G     ++  A+ + 
Sbjct: 321 DIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIF 380

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           Q++L +G    + TY V+I G C+ G  +E L L   M       + ++Y  ++ ++ + 
Sbjct: 381 QEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEK 440

Query: 252 GRIDEALGLLYEMEAVGLKPDL 273
           G   +   LL  M   GL   L
Sbjct: 441 GETVKTNKLLCAMIVRGLSKRL 462



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G +  ++ ++ +M+ +   V I TYNSLL+ L    H D    L  +IK      NV 
Sbjct: 299 KLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVC 358

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +IDGLC+  RL+DA +  QE   + +  +V + N +++  CK G  + A  L   M
Sbjct: 359 TYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRM 418

Query: 125 LKYGLHPDAFSYNILIHGLCIAG 147
                 PDA SY  +I+ L   G
Sbjct: 419 EDNACIPDAVSYETIIYALSEKG 441



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 76/183 (41%), Gaps = 12/183 (6%)

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M  I  TP  + +N I+ S  K      A  L  Q+  + ++P+  T  IL++  C  G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY-- 591
           +     +L  + +       + +TT+IK  C  G  ++A+ F   +V  GF++    Y  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 592 ----------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                     T++   M+       D  +   ++ +  +G  +   + L + MI  G+ P
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFP 180

Query: 642 DKF 644
           + +
Sbjct: 181 NVY 183


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/585 (25%), Positives = 274/585 (46%), Gaps = 27/585 (4%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +++GLC+  +L  A+L L E       P +V+   +++  C+    + A  +    ++
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD  +YN+ I GLC A  +++A +    M      P  +TY+ L  G     ++  
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  ++++++ KG+ P + TYTV+I G  + G VEE  ++   ML  G + +   Y+ L+S
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189

Query: 247 SMCKSGRIDEALGLLYEME----AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            + K G++DEAL  L +M     A G++PD+V ++++IR LC    +  A+  ++E+   
Sbjct: 190 GLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DD 248

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +    F    ++  LC+ E   EA  +   +    C   +  Y  ++DG++KLG + EA
Sbjct: 249 SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEA 308

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +   ++ +E+   P  VT+ S+I G CK G+V +       ++  G EP AVTY   ++ 
Sbjct: 309 LLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDG 368

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           + +   I +   + ++M       + VTY +++ GLCK  ++ EA      M   G    
Sbjct: 369 FMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVAT 428

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TY+ ++  FC   ++  A +L  +M     EP   +YNI+I GLC  G L  A     
Sbjct: 429 VVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFE 488

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
            L +  +      + + +   C   D           V  G E+         F  M+S 
Sbjct: 489 KLLQRRLCPDVYTFNSFLHGLCQRLDT----------VGDGVEL---------FESMVSQ 529

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           G  P+     +++    + G L    E+   M+  G+ PD  + N
Sbjct: 530 GTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFN 574



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 162/618 (26%), Positives = 295/618 (47%), Gaps = 15/618 (2%)

Query: 8   RTGMVHDAVFVIAKMK-ELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           +TG +  A+ ++ +M    D+       N L    R  +    L   ++    P  V T 
Sbjct: 21  KTGQLDRAMLLLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYV-TY 79

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           ++ IDGLC+  R+ DA   L++   K+  P+ V+  A++    K G  + A  +   M++
Sbjct: 80  NVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVE 139

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  P   +Y ++I GL  AG +EEA     DM  +G  PDA  Y+ L  G   + ++  
Sbjct: 140 KGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDE 199

Query: 187 AW----KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           A     ++++    +G +PD+V + ++I   C  GN+E+ L   +  L     L    ++
Sbjct: 200 ALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFD-ELDDSLDLTHFTFN 258

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++++CK+ R +EA+  + +M      P L TY+ L+ G  K  ++ +A+    E   +
Sbjct: 259 PLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVER 318

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P++  + +I+ GLC+   + E    F  +       D V Y  +IDG++K   I +A
Sbjct: 319 GFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKA 378

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            ++YRQ+++     S VT+N ++ G CK G+VA+A      ++  G   + VTY+  M+ 
Sbjct: 379 HRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDG 438

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +C EGN+   + L + M  +   P  V+Y ++I+GLC+  KL +A    E +    + PD
Sbjct: 439 FCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPD 498

Query: 483 QITYNTIIRSFCKCKD-LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
             T+N+ +   C+  D +    +L   M      P   +Y+IL+DG+C  G L+    + 
Sbjct: 499 VYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIF 558

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
             +    ++   V + T+I+  C  G V +A+  F        E+  R    ++    L 
Sbjct: 559 HEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVF-------RELERRSAPDAWSYWSLL 611

Query: 602 NGFPPDQEICEVMLIAFH 619
           +     + + E  L++FH
Sbjct: 612 DALSRCERMEEARLLSFH 629



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 188/384 (48%), Gaps = 37/384 (9%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T + ++  LC+  R ++AI F+++ + +   P++ +  +++  + KLG  + A      
Sbjct: 255 FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKE 314

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
            ++ G  PDA +Y  +I GLC  G +EE  E  ++M   G EPDA+TY+ L  GF     
Sbjct: 315 AVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKM 374

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I  A +V +++L  G+    VTY +++ G C+ G V E       M  +G    V+ YS 
Sbjct: 375 IPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSA 434

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+   C  G +  A+ L   M   G +P+LV+Y+I+IRGLC+  K+ KA   + ++  +R
Sbjct: 435 LMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 494

Query: 304 ISPNSFAHGAILLGLCEK------------EMITEARM---------------------- 329
           + P+ +   + L GLC++             M+++                         
Sbjct: 495 LCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVT 554

Query: 330 --YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F  ++      DVV++N +I      G + EA++++R+L E+R +P   ++ SL+  
Sbjct: 555 LEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSYWSLLDA 613

Query: 388 FCKNGKVADARRLLDTIKLHGLEP 411
             +  ++ +AR L   +KL G  P
Sbjct: 614 LSRCERMEEARLLSFHMKLQGCAP 637


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 192/728 (26%), Positives = 317/728 (43%), Gaps = 90/728 (12%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
            ++R+G +  A   I +M +  +   + T+  L+  L  +   D     ++ +K      N
Sbjct: 297  FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            V T + +++GL +  RL++A     E       P  ++ N ++    K G A++A GLF 
Sbjct: 357  VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFK 416

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             M   GL P+  +YNI+I  L  AG   EA +  +D+   G  PD  TY+ L        
Sbjct: 417  EMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGG 476

Query: 183  QISGAWKVIQKLLIKGSD------------------------PDI-------VTYTVLIC 211
            Q+     +I++++ KG +                        P +       +TY  L+ 
Sbjct: 477  QMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMS 536

Query: 212  GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
             +   G+V+E +KL EVM        V+ Y+ L+  + K+GR+DEA+ LL EME  G +P
Sbjct: 537  AFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEP 596

Query: 272  -----------------------------------DLVTYSILIRGLCKQDKVHKAIQLY 296
                                               D+ TYS++I  LCK D V +A+ ++
Sbjct: 597  SVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVF 656

Query: 297  NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
              M  + + P    +  +L  L + E I  A   F+ L  S+ + D  +YNIM++G VK 
Sbjct: 657  GRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKS 716

Query: 357  GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
              + EA +L   +  + I P + T+ SL+ G  K+G++ +A  +   +   G EP  V Y
Sbjct: 717  NRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAY 776

Query: 417  TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T+ M+   + G +   L + + M  K   P  VTY+ +I  L K+ +++EA    E+   
Sbjct: 777  TSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSIS 836

Query: 477  IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             G TP+   Y+++I SF K   + +A +L  +M      P   TYN L+ GL   G L  
Sbjct: 837  KGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNV 896

Query: 537  ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--- 593
            A+ LL  +++       V Y  +I      G V +A ++F +M EKG    +  +T    
Sbjct: 897  AEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIE 956

Query: 594  ------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV---MIKSG 638
                          F  M   G+ P      V++      G  G V E A +   M   G
Sbjct: 957  SLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDIL---GRAGKVHEAAMIFHEMKVKG 1013

Query: 639  LLPDKFLI 646
             +PD   I
Sbjct: 1014 CMPDGITI 1021



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 254/495 (51%), Gaps = 3/495 (0%)

Query: 33   TYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
            TYN+L+       H D    L + +K  E    V T + ++DGL +  RL +A+  L+E 
Sbjct: 530  TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM 589

Query: 90   AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
              +   PSVV+ +++M+ + K    E +  LF  M++ G   D  +Y+++I+ LC +  +
Sbjct: 590  EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDV 649

Query: 150  EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
            ++AL+    M   G+EP    Y  L        +I  A ++  +L      PD   Y ++
Sbjct: 650  DQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIM 709

Query: 210  ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
            + G  +   V+E  KL + M +Q    ++  Y+ LL  + KSGR++EA  +  +M   G 
Sbjct: 710  VNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGH 769

Query: 270  KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            +PD+V Y+ L+  L K  K+  A+ ++  M  KR  P+   + +++  L ++  + EA  
Sbjct: 770  EPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYY 829

Query: 330  YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
            +F++ I   C  +V +Y+ +ID + K G +  A++L+ ++  ++  P+IVT+N+L+ G  
Sbjct: 830  FFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLA 889

Query: 390  KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
            K G++  A +LL+ ++  G  P  VTY   ++   + G +    +  + M+ K I P  +
Sbjct: 890  KAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVI 949

Query: 450  TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            T+T +I+ L K  KL EA +L + M   G  P  +TYN +I    +   + +A  + ++M
Sbjct: 950  TFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEM 1009

Query: 510  WLHNLEPTSATYNIL 524
             +    P   T  I+
Sbjct: 1010 KVKGCMPDGITIGIM 1024



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/539 (26%), Positives = 250/539 (46%), Gaps = 66/539 (12%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F  M  +G +P    YN ++  L   G    A+     +G+  ++PDA T+ I    F+
Sbjct: 239 IFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFN 298

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A + IQ+++  G DP + T+TVLI    + GN++E  K    M +     NV+
Sbjct: 299 RSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVV 358

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L++ + K+GR++EA  +  EM+     PD + Y+ LI GL K  +   A  L+ EM
Sbjct: 359 TYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEM 418

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             + + PN   +  ++  L +     EA   F  L     + DV  YN +ID   K G +
Sbjct: 419 KDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQM 478

Query: 360 GEAVQLYRQLIEK-------RIS-----------------PSI-------VTFNSLIYGF 388
            + + + ++++EK       R S                 PS+       +T+N+L+  F
Sbjct: 479 DKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAF 538

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
             NG V +A +LL+ +K H   P+ VTYTT ++   + G +   ++LL+EME +   P+ 
Sbjct: 539 IHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSV 598

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK------- 501
           VTY+ ++    K+ + +E++ L ++M   G   D  TY+ +I   CK  D+ +       
Sbjct: 599 VTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGR 658

Query: 502 ----------------------------AFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
                                       A Q+ N++   +L P +  YNI+++GL  +  
Sbjct: 659 MKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNR 718

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +  A  L+ S++  NI      YT+++      G + +A   F +M E+G E  +  YT
Sbjct: 719 VDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYT 777



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 190/436 (43%), Gaps = 36/436 (8%)

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TYT++I         +  +++   M  +G ++++   + LL +   +  +  AL +  +M
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQM 243

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           ++ G  P    Y+ ++  L K    H A+ ++ ++   RI P++      +        +
Sbjct: 244 KSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRL 303

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
             A      +I S     V  + ++ID  VK GNI EA + +  +   R SP++VT+ +L
Sbjct: 304 DPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTL 363

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           + G  K G++ +A  +   +K +   P A+ Y T ++   + G       L +EM+ + +
Sbjct: 364 VNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGL 423

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P   TY ++I  L K  +  EA QL  D+   G  PD  TYNT+I    K   + K   
Sbjct: 424 VPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLA 483

Query: 505 LLNQMWLHNLE------------------------PT-------SATYNILIDGLCVNGD 533
           ++ +M     E                        P+         TYN L+     NG 
Sbjct: 484 IIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGH 543

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           +  A  LL  +++H    T V YTT++      G + +A++   +M ++G E S+  Y+ 
Sbjct: 544 VDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSS 603

Query: 594 SFFCMMLSNGFPPDQE 609
                ++++ +  DQE
Sbjct: 604 -----LMASFYKRDQE 614



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/524 (21%), Positives = 217/524 (41%), Gaps = 46/524 (8%)

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           TY+++ K      +     +++  +  +G    +   T L+  +    NV   L++   M
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQM 243

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
            S G   +   Y+ +L  + K G    A+ +  ++    ++PD  T+ I +    +  ++
Sbjct: 244 KSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRL 303

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             A +   EM    I P       ++  L +   I EA  +F+ +    C  +VV Y  +
Sbjct: 304 DPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTL 363

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           ++G  K G + EA +++ ++ E   SP  + +N+LI G  K G+   A  L   +K  GL
Sbjct: 364 VNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGL 423

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P+  TY   ++   + G       L  +++ +   P   TY  +I  L K  ++ + + 
Sbjct: 424 VPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLA 483

Query: 470 LLEDMYVIG----VTPD---------------------------QITYNTIIRSFCKCKD 498
           ++++M   G    ++ D                           +ITYNT++ +F     
Sbjct: 484 IIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGH 543

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           + +A +LL  M  H   PT  TY  L+DGL   G L  A  LL  +++     + V Y++
Sbjct: 544 VDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSS 603

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM---------------MLSNG 603
           ++ +        ++++ F +MV KG    +  Y+    C+               M   G
Sbjct: 604 LMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEG 663

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             P     + +L +  +   +    ++   + +S L+PD F+ N
Sbjct: 664 MEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYN 707



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 148/293 (50%), Gaps = 9/293 (3%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL------YNLRHTDIMWDLYDDIKVSETPR 61
            ++G + +A  +  KM E   +  +  Y SL+        L H  I   ++  +       
Sbjct: 750  KSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALI---IFRAMAKKRCVP 806

Query: 62   NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            +V T S +ID L ++ R+++A  F + +  K   P+V   ++++  + K G  + A  LF
Sbjct: 807  DVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELF 866

Query: 122  CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              M +    P+  +YN L+ GL  AG +  A +   +M + G  PD +TY+IL  G   +
Sbjct: 867  EEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKM 926

Query: 182  SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
              +  A    +++  KG  PD++T+T LI    ++  + E  +L + M  +G+  +V+ Y
Sbjct: 927  GMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTY 986

Query: 242  SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
            +VL+  + ++G++ EA  + +EM+  G  PD +T  I+ R L  +++   A++
Sbjct: 987  NVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQFHALE 1039



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 136/302 (45%)

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G+   V  Y++++  +  +   D  + +L  M   G +  +   + L+R     + V  A
Sbjct: 177 GYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGA 236

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           ++++N+M S   +P++  +  +L  L +      A + F  L       D   + I +  
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHS 296

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           + + G +  A +  +++I+  I P + TF  LI    K+G + +A +  + +K     P+
Sbjct: 297 FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            VTYTT +N   + G ++    +  EM+     P  + Y  +I GL K  +   A  L +
Sbjct: 357 VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFK 416

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +M   G+ P+  TYN +I    K     +A+QL + +      P   TYN LID L   G
Sbjct: 417 EMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGG 476

Query: 533 DL 534
            +
Sbjct: 477 QM 478


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 259/529 (48%), Gaps = 8/529 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y R G    A+    +M++  +K +++ YN +L  L       ++  +Y ++K      N
Sbjct: 121 YRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPN 180

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+T +I++  LC+ +R+  A   L E + K   P  VS   ++S  CKLG  + A+ L  
Sbjct: 181 VFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-- 238

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
                   P    YN LI+G+C   + EEA +  ++M   G++P+ I+Y+ +        
Sbjct: 239 ---AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAG 295

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  +  V+ K+  +G  P++ T+T LI G+   G   E L   + M+ +G   NV+AY+
Sbjct: 296 NVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYN 355

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +C    + +A+ +  +ME  G  P++ TYS LI G  K   +  A +++N M + 
Sbjct: 356 ALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITH 415

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              PN  A+  ++  LC   M  +A    +++ + NC  + V +N  I G    G +  A
Sbjct: 416 GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWA 475

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++++ Q+      P+  T+N L+    K+ +  +A  L+  ++  G+E + VTY T +  
Sbjct: 476 IKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYG 535

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC  G +   L LL +M  +   P  +T  +VI   CKQ K+  A+QL++ +      PD
Sbjct: 536 YCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPD 595

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            I Y ++I   C    + +A   L +M    + P  AT+N+L+  L  N
Sbjct: 596 IIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSN 644



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 251/497 (50%), Gaps = 5/497 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+V   N I+         ++   ++  M K G+ P+ F+YNIL+  LC    ++ A + 
Sbjct: 144 PTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKL 203

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M   G +PD ++Y+ L      L ++  A ++          P +  Y  LI G C+
Sbjct: 204 LVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGVCK 258

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
               EE  +L + M+++G   NVI+Y+ +++++  +G ++ +L +L +M A G  P+L T
Sbjct: 259 EYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHT 318

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ LI+G   +   H+A+  ++ M  + + PN  A+ A++ GLC K  + +A   F+ + 
Sbjct: 319 FTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQME 378

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
           ++ C  +V  Y+ +IDGY K G++  A +++  +I     P++V +  ++   C+N    
Sbjct: 379 INGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFN 438

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L++ +++    P+ VT+ TF+   C  G +   + +  +M      P   TY  ++
Sbjct: 439 QAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELL 498

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             L K  +  EA  L++DM   G+  + +TYNTII  +C    L +A +LL +M +   +
Sbjct: 499 DSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTK 558

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P + T NI+ID  C  G +  A  L+  L         +AYT++I   C    V +A+ +
Sbjct: 559 PDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVY 618

Query: 576 FCQMVEKGFEISIRDYT 592
             +M+ +G   ++  + 
Sbjct: 619 LRRMLSEGISPNVATWN 635



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 262/548 (47%), Gaps = 21/548 (3%)

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
           +++  Y + G +E A   F  M  + + P    YN ++  L      +      ++M + 
Sbjct: 116 SVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKD 175

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G+EP+  TY+IL K     +++ GA K++ ++  KG DPD V+YT LI   C++G V+E 
Sbjct: 176 GMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA 235

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
              RE+ +S  F  +V  Y+ L++ +CK    +EA  LL EM   G+ P++++Y+ +I  
Sbjct: 236 ---RELAMS--FTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           L     V  ++ +  +M ++  SPN     +++ G   K    EA  ++D +I    + +
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN 350

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           VV YN ++ G     ++G+AV ++ Q+      P++ T+++LI G+ K G +  A  + +
Sbjct: 351 VVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWN 410

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +  HG  P+ V YT  ++  C      +   L++ M+ +   P  VT+   IKGLC   
Sbjct: 411 WMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSG 470

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           ++  A+++ + M   G  P+  TYN ++ S  K +   +AF L+  M    +E    TYN
Sbjct: 471 RVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYN 530

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            +I G C  G L  A  LL  +         +    +I A+C +G V+ A+    ++   
Sbjct: 531 TIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAG 590

Query: 583 GFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEVMLIA-FHQGGDLGS 626
            +   I  YT   S  C              MLS G  P+     V++   F   G  G+
Sbjct: 591 KWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGA 650

Query: 627 VFELAAVM 634
           V  L AV+
Sbjct: 651 VQFLDAVL 658



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 219/494 (44%), Gaps = 20/494 (4%)

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +TY ++ +      ++     ++Q++ ++G       +  +I  Y + G+ E+ LK    
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M     K  V  Y+ +L ++    R      +   M+  G++P++ TY+IL++ LCK ++
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V  A +L  EM SK   P+  ++  ++  LC+   + EAR     L MS     V +YN 
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR----ELAMS-FTPSVPVYNA 251

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I+G  K     EA QL  +++ K I P+++++ ++I      G V  +  +L  +   G
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
             P+  T+T+ +  +  +G     L     M  + + P  V Y  ++ GLC +  L +AV
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAV 371

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            +   M + G  P+  TY+ +I  + K  DL  A ++ N M  H   P    Y  ++D L
Sbjct: 372 SVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVL 431

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C N     A CL+ ++Q  N     V + T IK  C  G V  A+  F QM   G   + 
Sbjct: 432 CRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNT 491

Query: 589 RDYTKSFFCMMLSNGFPP--------DQEICEVMLIAFHQ-------GGDLGSVFELAAV 633
             Y +    ++    F          +    E+ L+ ++         G LG   EL   
Sbjct: 492 TTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGK 551

Query: 634 MIKSGLLPDKFLIN 647
           M+  G  PD   +N
Sbjct: 552 MVVRGTKPDAITVN 565


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 158/565 (27%), Positives = 263/565 (46%), Gaps = 18/565 (3%)

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP-DAFSYNILIHGLCIAGSMEEALEFTN 157
           V++N +++  C+ G  + A  L       G+H  D   +N LI G C  G    AL   +
Sbjct: 136 VTVNTLLAGLCRNGQVDAAAAL--ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVAD 193

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            M   G+  D + Y+ L  GF    Q+  A  V+  +   G DP++ TYT  I  YC+  
Sbjct: 194 RMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTK 253

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            VEE   L E M+  G  L+V+  S L++ +C+ GR  EA  L  EM+ VG  P+ VTY 
Sbjct: 254 GVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYC 313

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            LI  L K  +  + + L  EM S+ +  +   + A++  L ++    E +      +  
Sbjct: 314 TLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSD 373

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
           N   + V Y ++ID   K  N+ EA Q+  ++ EK ISP++VTF+S+I GF K G +  A
Sbjct: 374 NLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA 433

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
                 +K  G+ P+ VTY T ++ + +       L +  +M  + +         ++ G
Sbjct: 434 TEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNG 493

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           L +  K++EA+ L +D    G++ D + Y T+I    K  D+  AF+   ++   N+ P 
Sbjct: 494 LRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPD 553

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
           +  YN+ I+ LC+ G  K A   L  ++   +   +  Y T+I +HC +G+  KA+    
Sbjct: 554 AVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLH 613

Query: 578 QMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           +M     + ++  Y                K     M+S GF P       +L A  Q  
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673

Query: 623 DLGSVFELAAVMIKSGLLPDKFLIN 647
            L  + ++   M+ +GL  D  + N
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYN 698



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 163/634 (25%), Positives = 291/634 (45%), Gaps = 45/634 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNS-LLYNLRHTDI--MWDLYDDIKVSETPRN 62
           + R G V  A  V+  MKE  +  ++ TY   ++Y  R   +   +DLY+ +  +    +
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQET-----------------------AGKEF----G 95
           V T S ++ GLC+  R  +A    +E                         GKE     G
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 96  PSV--------VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
             V        V+  A+M    K G  +  K      L   L P+  +Y +LI  LC A 
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAH 393

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           +++EA +   +M    + P+ +T+S +  GF     +  A +  + +  +G +P++VTY 
Sbjct: 394 NVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYG 453

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            LI G+ +    +  L++   ML +G K+N      L++ + ++G+I+EA+ L  +    
Sbjct: 454 TLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGS 513

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL  D V Y+ LI GL K   +  A +   E+  + + P++  +   +  LC      EA
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEA 573

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           + +   +       D   YN MI  + + G   +A++L  ++    I P+++T+N+L+ G
Sbjct: 574 KSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
               G V  A+ LL+ +   G  PS++T+   + A  +   +  +L + + M    +   
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
              Y  +++ LC     ++A  +LE+M   G+ PD IT+N +I   CK   L  AF    
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           QM   N+ P  AT+N L+ GL   G +  A  +L+ +++  +    + Y  +   H  + 
Sbjct: 754 QMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQS 813

Query: 568 DVHKAMTFFCQMVEKGF--EIS-----IRDYTKS 594
           +  +AM  +C+MV KGF  ++S     I D+TK+
Sbjct: 814 NKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 221/466 (47%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T S VI+G  ++  L  A  + +    +   P+VV+   ++  + K    + A  ++
Sbjct: 413 NVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVY 472

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  G+  + F  + L++GL   G +EEA+    D    G+  D + Y+ L  G    
Sbjct: 473 HDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKA 532

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A+K  Q+L+ +   PD V Y V I   C +G  +E       M + G K +   Y
Sbjct: 533 GDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTY 592

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++ S C+ G   +AL LL+EM+   +KP+L+TY+ L+ GL     V KA  L NEM S
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
              SP+S  H  +L    +   +       + ++ +    D+ +YN ++      G   +
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  +  +++   I+P  +TFN+LI G CK+  + +A      +    + P+  T+ T + 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
                G I     +L EME   + P ++TY ++  G  KQ    EA++L  +M   G  P
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
              TYN +I  F K   + +A +L   M    + PTS TY+IL+ G
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/466 (23%), Positives = 219/466 (46%), Gaps = 6/466 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           + + G++  A      MKE  +  ++ TY +L+   +  +  D   ++Y D+       N
Sbjct: 424 FVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVN 483

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +    +++GL Q  ++++A+   ++ +G       V+   ++    K G    A     
Sbjct: 484 KFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQ 543

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ++   + PDA  YN+ I+ LC+ G  +EA  F  +M   G++PD  TY+ +        
Sbjct: 544 ELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKG 603

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           + + A K++ ++ +    P+++TY  L+ G    G VE+   L   M+S GF  + + + 
Sbjct: 604 ETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +L +  +S R+D  L +   M   GL  D+  Y+ L++ LC      KA  +  EM   
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I+P++    A++LG C+   +  A   +  ++  N   ++  +N ++ G   +G IGEA
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +  ++ +  + P+ +T++ L  G  K     +A RL   +   G  P   TY   ++ 
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG---LCKQWKLQ 465
           + + G + +   L ++M+ + + PT  TY +++ G   L ++ K Q
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQ 889



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 176/385 (45%), Gaps = 44/385 (11%)

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL S C+   +  A+ LL        +P  V Y+IL+  L   D  H A  +  EMC 
Sbjct: 77  NALLYSHCRLRLLRPAIALLRSS-----RPTTVAYNILLAAL--SDHAH-APAVLAEMCK 128

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + +  +      +L GLC    +  A    D     + + DV+ +N +I GY ++G+   
Sbjct: 129 RGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPA 187

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ +  ++  + +   +V +N+L+ GFC+ G+V  AR +LD +K  G++P+  TYT F+ 
Sbjct: 188 ALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIV 247

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC    ++    L + M    +    VT + ++ GLC+  +  EA  L  +M  +G  P
Sbjct: 248 YYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAP 307

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQM-----------------WL------------- 511
           + +TY T+I S  K    ++   LL +M                 WL             
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTL 367

Query: 512 -----HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
                 NL P   TY +LID LC   ++  A+ +L+ ++E +IS   V ++++I      
Sbjct: 368 RFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDY 591
           G + KA  +   M E+G   ++  Y
Sbjct: 428 GLLDKATEYKRMMKERGINPNVVTY 452



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 104/269 (38%), Gaps = 34/269 (12%)

Query: 398 RRLLDTIKLHGLEPSAVTY--------TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           RRL+  +   GL  +A+ +           + ++C    ++  +ALL+        PT V
Sbjct: 50  RRLIPALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTV 104

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ- 508
            Y +++  L        A  +L +M   GV  D +T NT++   C+   +  A  L ++ 
Sbjct: 105 AYNILLAALSDH---AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRG 161

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
             +H L+     +N LI G C  GD   A  +   +    + +  V Y T++   C  G 
Sbjct: 162 GGIHALDVIG--WNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEV 613
           V  A      M E G + ++  YT    ++C              M+ NG   D      
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           ++    + G     + L   M K G  P+
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPN 308


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 174/612 (28%), Positives = 286/612 (46%), Gaps = 37/612 (6%)

Query: 66  NSIVID----GLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKG 119
           N+IVI+    GLC   RL++A+  L +    E G  P VVS N ++  +C    AE A  
Sbjct: 128 NNIVINQLLKGLCDAKRLREAMDILIKRM-PELGCTPDVVSYNTLLKGFCNEKRAEEALE 186

Query: 120 LFCLMLK---YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           L  +M         P+  SY  +I+G    G +++A     +M   G++P+ +TY+ +  
Sbjct: 187 LLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVID 246

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G      +  A  V Q+++ KG  PD  TY  LI GY  IG  +E +++ E M + G K 
Sbjct: 247 GLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKP 306

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +   Y  LL+ +C +GR  EA      M   G+KP++  Y ILI G   +  + +   L 
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           N M    +SP+      I     +K MI EA   F+ +       DVV +  +ID   KL
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKL 426

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G + +AV  + Q++ + ++P+I  FNSL+YG C   K   A+     +   G+ P  V +
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T +   C +G + +   L+  ME     P  ++YT +I G C   ++ EA + L+ M  
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
           +G+ PD+ TYNT++  +C+   +  A+ +  +M  + + P   TY+ ++ GL        
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606

Query: 537 ADCL----LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           A  L    + S ++ NI +  +    + K +C    V +A   F  +  K F++ I  + 
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNC----VDEAFKLFQSLCSKDFQLEITTFN 662

Query: 593 -------KS--------FFCMMLSNGFPPDQEICEVMLIAFH--QGGDLGSVFELAAVMI 635
                  KS         F  + S G  PD  +    LIA +  + G L    +L + M 
Sbjct: 663 IMIGALFKSGRNEDAMHLFATISSYGLVPD--VFTYCLIAENLIEEGYLEEFDDLFSAME 720

Query: 636 KSGLLPDKFLIN 647
           KSG  P+  ++N
Sbjct: 721 KSGTTPNSRMLN 732



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/572 (26%), Positives = 270/572 (47%), Gaps = 6/572 (1%)

Query: 18  VIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYD---DIKVSETPRNVYTNSIVID 71
           +I +M EL     + +YN+LL    N +  +   +L     D +    P NV + + VI+
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           G   + ++  A     E   +   P+VV+   ++   CK    + A+G+F  M+  G+ P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  +YN LIHG    G  +E +    +M  HG++PD  TY  L        +   A    
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFF 331

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             ++ KG  P++  Y +LI GY   G + E   L  +M+  G   +   ++++ ++  K 
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
             IDEA+ +  +M+  GL PD+V +  LI  LCK  +V  A+  +N+M ++ ++PN F  
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
            +++ GLC  +   +A+ ++  ++      DVV +N ++      G + +A +L   +  
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER 511

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
               P ++++ +LI G C  G++ +A + LD +   GL+P   TY T ++ YC  G I  
Sbjct: 512 VGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDD 571

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              + +EM    I P  VTY+ ++ GL    +  EA +L  +M   G   +   YN I+ 
Sbjct: 572 AYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILN 631

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
              K   + +AF+L   +   + +    T+NI+I  L  +G  ++A  L  ++  + +  
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
               Y  I +    EG + +    F  M + G
Sbjct: 692 DVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 251/529 (47%), Gaps = 4/529 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE- 154
           P + + + ++  +C++G  E     F L+LK G   +    N L+ GLC A  + EA++ 
Sbjct: 92  PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI 151

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI---KGSDPDIVTYTVLIC 211
               M   G  PD ++Y+ L KGF    +   A +++  +     +   P++V+Y  +I 
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           G+   G V++   L   M+ +G + NV+ Y+ ++  +CK+  +D A G+  +M   G+KP
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D  TY+ LI G     K  + +++  EM +  + P+ + +G++L  LC      EAR +F
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFF 331

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           DS+I      +V +Y I+I GY   G + E   L   ++E  +SP    FN +   + K 
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
             + +A  + + +K  GL P  V +   ++A C+ G +   +    +M  + + P    +
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             ++ GLC   K ++A +   +M   G+ PD + +NTI+ + C    + KA +L++ M  
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER 511

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
               P   +Y  LI G C+ G +  A   L  +    +   +  Y T++  +C  G +  
Sbjct: 512 VGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDD 571

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
           A   F +M+  G    +  Y+     +  +  F   +E+   M+ +  Q
Sbjct: 572 AYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/507 (24%), Positives = 225/507 (44%), Gaps = 55/507 (10%)

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++I++  IK + PD+ TY++LI  +C++G +E G     ++L  G+++N I  + LL  +
Sbjct: 81  RMIRECTIKVT-PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGL 139

Query: 249 CKSGRIDEALGLLYE-MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL------------ 295
           C + R+ EA+ +L + M  +G  PD+V+Y+ L++G C + +  +A++L            
Sbjct: 140 CDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSC 199

Query: 296 -----------------------YN---EMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
                                  YN   EM  + I PN   +  ++ GLC+ +++  A  
Sbjct: 200 PPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEG 259

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
            F  +I      D   YN +I GY+ +G   E V++  ++    + P   T+ SL+   C
Sbjct: 260 VFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLC 319

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
            NG+  +AR   D++   G++P+   Y   ++ Y  +G +  +  LL  M    + P H 
Sbjct: 320 NNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHH 379

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            + ++     K+  + EA+ +   M   G++PD + +  +I + CK   +  A    NQM
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQM 439

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               + P    +N L+ GLC     + A      +    I    V + TI+   C +G V
Sbjct: 440 MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499

Query: 570 HKAMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEVM 614
            KA      M   G    +  YT      C+             MLS G  PD+     +
Sbjct: 500 MKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLP 641
           L  + + G +   + +   M+++G+ P
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITP 586



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/487 (23%), Positives = 228/487 (46%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I G     + ++ +  L+E +     P   +  ++++  C  G    A+  F  M
Sbjct: 275 TYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSM 334

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G+ P+   Y ILIHG    G++ E  +  N M  +G+ PD   ++I+   +   + I
Sbjct: 335 IRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMI 394

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +  K+  +G  PD+V +  LI   C++G V++ +     M+++G   N+  ++ L
Sbjct: 395 DEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL 454

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +C   + ++A    +EM   G++PD+V ++ ++  LC + +V KA +L + M     
Sbjct: 455 VYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGT 514

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+  ++  ++ G C    I EA    D ++      D   YN ++ GY + G I +A  
Sbjct: 515 RPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYG 574

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           ++R+++   I+P +VT++++++G     + ++A+ L   +   G + +   Y   +N   
Sbjct: 575 VFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLS 634

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +   +     L Q + +K       T+ ++I  L K  + ++A+ L   +   G+ PD  
Sbjct: 635 KNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVF 694

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TY  I  +  +   L +   L + M      P S   N L+  L   GD+  A   L  L
Sbjct: 695 TYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKL 754

Query: 545 QEHNISL 551
            E N SL
Sbjct: 755 DEKNFSL 761



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 220/473 (46%), Gaps = 5/473 (1%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKV----SETPRNVY 64
            G   +A F    M    +K ++  Y  L++       + +++D + +      +P +  
Sbjct: 321 NGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            N I+     +++ + +A+    +   +   P VV+  A++   CKLG  + A   F  M
Sbjct: 381 FN-IIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQM 439

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G+ P+ F +N L++GLC     E+A EF  +M   G+ PD + ++ +        Q+
Sbjct: 440 MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++I  +   G+ PD+++YT LI G+C +G ++E  K  +VMLS G K +   Y+ L
Sbjct: 500 MKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L   C++GRID+A G+  EM   G+ P +VTYS ++ GL    +  +A +LY  M +   
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK 619

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             N + +  IL GL +   + EA   F SL   +   ++  +NIMI    K G   +A+ 
Sbjct: 620 QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMH 679

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+  +    + P + T+  +     + G + +   L   ++  G  P++      +    
Sbjct: 680 LFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLL 739

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             G+I R  A L +++ K       T  ++I  L +      A  L E   V+
Sbjct: 740 HRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVL 792



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/522 (22%), Positives = 234/522 (44%), Gaps = 5/522 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNV 63
           +  +V  A  V  +M +  +K    TYN L++        W     + +++       + 
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIG-KWKEVVRMLEEMSAHGLKPDC 308

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           YT   +++ LC   R ++A  F      K   P+V     ++  Y   G       L  L
Sbjct: 309 YTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNL 368

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M++ GL PD   +NI+         ++EA+   N M + G+ PD + +  L      L +
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGR 428

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A     +++ +G  P+I  +  L+ G C +   E+  +    ML+QG + +V+ ++ 
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNT 488

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +L ++C  G++ +A  L+  ME VG +PD+++Y+ LI G C   ++ +A +  + M S  
Sbjct: 489 ILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG 548

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P+ + +  +L G C    I +A   F  ++ +     VV Y+ ++ G        EA 
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAK 608

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +LY  +I      +I  +N ++ G  KN  V +A +L  ++     +    T+   + A 
Sbjct: 609 ELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            + G  +  + L   + +  + P   TY ++ + L ++  L+E   L   M   G TP+ 
Sbjct: 669 FKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNS 728

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
              N ++R      D+ +A   L+++   N    ++T  +LI
Sbjct: 729 RMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLI 770



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 203/461 (44%), Gaps = 35/461 (7%)

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK-SGRIDEA------LGLLYEME---AVG 268
           +++ LKL + +L+     ++IA++ LL+++ + SGR          + L   M     + 
Sbjct: 30  LDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           + PDL TYSILI   C+  ++      +  +       N+     +L GLC+ + + EA 
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREA- 148

Query: 329 MYFDSLIMS----NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE---KRISPSIVTF 381
              D LI       C  DVV YN ++ G+       EA++L   + +   +   P++V++
Sbjct: 149 --MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSY 206

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
            ++I GF   G+V  A  L   +   G++P+ VTYTT ++  C+   + R   + Q+M  
Sbjct: 207 ATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMID 266

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           K + P + TY  +I G     K +E V++LE+M   G+ PD  TY +++   C     R+
Sbjct: 267 KGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCRE 326

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A    + M    ++P  A Y ILI G    G L     LL  + E+ +S     +  I  
Sbjct: 327 ARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFT 386

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF---------------FCMMLSNGFPP 606
           A+  +  + +AM  F +M ++G    + ++                   F  M++ G  P
Sbjct: 387 AYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAP 446

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +  +   ++             E    M+  G+ PD    N
Sbjct: 447 NIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 3/208 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y R G + DA  V  +M    +   + TY+++L+ L   R      +LY ++  S    N
Sbjct: 563 YCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWN 622

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           ++  +I+++GL + + + +A    Q    K+F   + + N ++    K G  E A  LF 
Sbjct: 623 IWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFA 682

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +  YGL PD F+Y ++   L   G +EE  +  + M + G  P++   + L +      
Sbjct: 683 TISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRG 742

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            I+ A   + KL  K    +  T  +LI
Sbjct: 743 DITRAGAYLSKLDEKNFSLEASTTAMLI 770


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/511 (27%), Positives = 255/511 (49%), Gaps = 1/511 (0%)

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           Q  +L DAI    +       PS+V  + ++S   K+   ++   L   M   G+  + +
Sbjct: 52  QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +Y+I I+  C    +  AL     M + G  P  +T + L  GF   ++IS A  ++ ++
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           +  G  PD VT+T L+ G  Q     E + L E M+ +G + +++ Y  +++ +CK G  
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D AL LL +ME   ++ D+V Y+ +I GLCK   +  A  L+N+M +K I P+ F +  +
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE-KR 373
           +  LC     ++A      ++  N   D+V +N +ID +VK G + EA +LY ++++ K 
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
             P +V +N+LI GFCK  +V +   +   +   GL  + VTYTT ++ + +  +     
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            + ++M +  + P  +TY +++ GLC    ++ A+ + E M    +  D +TY T+I + 
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           CK   +   + L   + L  ++P   TY  ++ G C  G  + AD L V ++E       
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             Y T+I+A   +GD   +     +M   GF
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEMRSCGF 562



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/524 (27%), Positives = 261/524 (49%), Gaps = 8/524 (1%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           + DA+ +   M +     SI  ++ LL     +   D++  L + ++      N+YT SI
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
            I+  C++S+L  A+  L +     +GPS+V+LN++++ +C       A  L   M++ G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  ++  L+HGL       EA+     M   G +PD +TY  +  G     +   A 
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            ++ K+     + D+V Y  +I G C+  ++++   L   M ++G K +V  Y+ L+S +
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC-SKRISPN 307
           C  GR  +A  LL +M    + PDLV ++ LI    K+ K+ +A +LY+EM  SK   P+
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
             A+  ++ G C+ + + E    F  +     + + V Y  +I G+ +  +   A  +++
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           Q++   + P I+T+N L+ G C NG V  A  + + ++   ++   VTYTT + A C+ G
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            ++    L   +  K + P  VTYT ++ G C++   +EA  L  +M   G  P+  TYN
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY----NILIDG 527
           T+IR+  +  D   + +L+ +M        ++T+    N+L DG
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDG 579



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 248/510 (48%), Gaps = 16/510 (3%)

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +++A+    DM +    P  + +S L      +++      + +++   G   ++ TY++
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
            I  +C+   +   L +   M+  G+  +++  + LL+  C   RI EA+ L+ +M  +G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
            +PD VT++ L+ GL + +K  +A+ L   M  K   P+   +GA++ GLC++     A 
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
              + +       DVV+YN +IDG  K  ++ +A  L+ ++  K I P + T+N LI   
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM-ETKAIGPT 447
           C  G+ +DA RLL  +    + P  V +   ++A+ +EG +     L  EM ++K   P 
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            V Y  +IKG CK  +++E +++  +M   G+  + +TY T+I  F + +D   A  +  
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           QM    + P   TYNIL+DGLC NG+++ A  +   +Q+ ++ L  V YTT+I+A C  G
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICE 612
            V      FC +  KG + ++  YT                + F  M  +G  P+     
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            ++ A  + GD  +  EL   M   G   D
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGD 565



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 68/171 (39%), Gaps = 32/171 (18%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
            G V  A+ V   M++ D+K+ I TY ++                               
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTM------------------------------- 467

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
            I+ LC+  +++D        + K   P+VV+   +MS +C+ G  E A  LF  M + G
Sbjct: 468 -IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
             P++ +YN LI      G    + E   +M   G   DA T+ ++    H
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLH 577


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/565 (28%), Positives = 262/565 (46%), Gaps = 18/565 (3%)

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP-DAFSYNILIHGLCIAGSMEEALEFTN 157
           V++N +++  C+ G  + A  L       G+H  D   +N LI G C  G    AL   +
Sbjct: 136 VTVNTLLAGLCRNGQVDAAAAL--ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVAD 193

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            M   G+  D + Y+ L  GF    Q+  A  V+  +   G DP++ TYT  I  YC+  
Sbjct: 194 RMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTK 253

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            VEE   L E M+  G  L+V+  S L++ +C+ GR  EA  L  EM+ VG  P+ VTY 
Sbjct: 254 GVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYC 313

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            LI  L K  +  + + L  EM S+ +  +   + A++  L ++    E +      +  
Sbjct: 314 TLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSD 373

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
           N   + V Y ++ID   K  N+ EA Q+  ++ EK ISP++VTF+S+I GF K G +  A
Sbjct: 374 NLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA 433

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
                 +K  G+ P+ VTY T ++ + +       L +  +M  + +         ++ G
Sbjct: 434 TEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNG 493

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           L +  K++EA+ L +D    G++ D + Y T+I    K  D+  AF+   ++   N+ P 
Sbjct: 494 LRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPD 553

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
           +  YN+ I+ LC+ G  K A   L  ++   +   +  Y T+I +HC +G+  KA+    
Sbjct: 554 AVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLH 613

Query: 578 QM---------------VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           +M               V   F     +  K     M+S GF P       +L A  Q  
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673

Query: 623 DLGSVFELAAVMIKSGLLPDKFLIN 647
            L  + ++   M+ +GL  D  + N
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYN 698



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 163/634 (25%), Positives = 291/634 (45%), Gaps = 45/634 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNS-LLYNLRHTDI--MWDLYDDIKVSETPRN 62
           + R G V  A  V+  MKE  +  ++ TY   ++Y  R   +   +DLY+ +  +    +
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQET-----------------------AGKEF----G 95
           V T S ++ GLC+  R  +A    +E                         GKE     G
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 96  PSV--------VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
             V        V+  A+M    K G  +  K      L   L P+  +Y +LI  LC A 
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAH 393

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           +++EA +   +M    + P+ +T+S +  GF     +  A +  + +  +G +P++VTY 
Sbjct: 394 NVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYG 453

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            LI G+ +    +  L++   ML +G K+N      L++ + ++G+I+EA+ L  +    
Sbjct: 454 TLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGS 513

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL  D V Y+ LI GL K   +  A +   E+  + + P++  +   +  LC      EA
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEA 573

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           + +   +       D   YN MI  + + G   +A++L  ++    I P+++T+N+L+ G
Sbjct: 574 KSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
               G V  A+ LL+ +   G  PS++T+   + A  +   +  +L + + M    +   
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
              Y  +++ LC     ++A  +LE+M   G+ PD IT+N +I   CK   L  AF    
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           QM   N+ P  AT+N L+ GL   G +  A  +L+ +++  +    + Y  +   H  + 
Sbjct: 754 QMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQS 813

Query: 568 DVHKAMTFFCQMVEKGF--EIS-----IRDYTKS 594
           +  +AM  +C+MV KGF  ++S     I D+TK+
Sbjct: 814 NKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 231/518 (44%), Gaps = 35/518 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T S VI+G  ++  L  A  + +    +   P+VV+   ++  + K    + A  ++
Sbjct: 413 NVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVY 472

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  G+  + F  + L++GL   G +EEA+    D    G+  D + Y+ L  G    
Sbjct: 473 HDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKA 532

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A+K  Q+L+ +   PD V Y V I   C +G  +E       M + G K +   Y
Sbjct: 533 GDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTY 592

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++ S C+ G   +AL LL+EM+   +KP+L+TY+ L+ GL     V KA  L NEM S
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 302 KRISPNSFAHGAILLG-----------------------------------LCEKEMITE 326
              SP+S  H  +L                                     LC   M  +
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A +  + ++ S    D + +N +I G+ K  ++  A   Y Q++ + ISP+I TFN+L+ 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G    G++ +A  +L  ++  GLEP+ +TY      + ++ N    + L  EM  K   P
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              TY  +I    K   + +A +L +DM   GV P   TY+ ++  + + ++  +  + L
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCL 892

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
             M      P+  T + +       G    A  LL +L
Sbjct: 893 KDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/541 (25%), Positives = 239/541 (44%), Gaps = 35/541 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T +++ID LC+   + +A   L E   K   P+VV+ +++++ + K G  + A    
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYK 437

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M + G++P+  +Y  LI G       + ALE  +DM   GV+ +      L  G    
Sbjct: 438 RMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQN 497

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  + +     G   D V YT LI G  + G++    K  + ++ +    + + Y
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +V ++ +C  G+  EA   L EM  +GLKPD  TY+ +I   C++ +  KA++L +EM  
Sbjct: 558 NVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSL--------------IMSNCIQ------ 341
             I PN   +  ++ GL     + +A+   + +              ++  C Q      
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 342 ---------------DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
                          D+ +YN ++      G   +A  +  +++   I+P  +TFN+LI 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G CK+  + +A      +    + P+  T+ T +      G I     +L EME   + P
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
            ++TY ++  G  KQ    EA++L  +M   G  P   TYN +I  F K   + +A +L 
Sbjct: 798 NNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELF 857

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
             M    + PTS TY+IL+ G     +       L  ++E   S +K   + I +A    
Sbjct: 858 KDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKP 917

Query: 567 G 567
           G
Sbjct: 918 G 918



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 239/508 (47%), Gaps = 3/508 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           + + G++  A      MKE  +  ++ TY +L+   +  +  D   ++Y D+       N
Sbjct: 424 FVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVN 483

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +    +++GL Q  ++++A+   ++ +G       V+   ++    K G    A     
Sbjct: 484 KFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQ 543

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ++   + PDA  YN+ I+ LC+ G  +EA  F  +M   G++PD  TY+ +        
Sbjct: 544 ELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKG 603

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           + + A K++ ++ +    P+++TY  L+ G    G VE+   L   M+S GF  + + + 
Sbjct: 604 ETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +L +  +S R+D  L +   M   GL  D+  Y+ L++ LC      KA  +  EM   
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I+P++    A++LG C+   +  A   +  ++  N   ++  +N ++ G   +G IGEA
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +  ++ +  + P+ +T++ L  G  K     +A RL   +   G  P   TY   ++ 
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           + + G + +   L ++M+ + + PT  TY +++ G  +     E  + L+DM   G +P 
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPS 903

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           + T + I R+F K     +A +LL  ++
Sbjct: 904 KGTLSFICRAFSKPGMTWQAQRLLKNLY 931



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 176/385 (45%), Gaps = 44/385 (11%)

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL S C+   +  A+ LL        +P  V Y+IL+  L   D  H A  +  EMC 
Sbjct: 77  NALLYSHCRLRLLRPAIALLRSS-----RPTTVAYNILLAAL--SDHAH-APAVLAEMCK 128

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + +  +      +L GLC    +  A    D     + + DV+ +N +I GY ++G+   
Sbjct: 129 RGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPA 187

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ +  ++  + +   +V +N+L+ GFC+ G+V  AR +LD +K  G++P+  TYT F+ 
Sbjct: 188 ALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIV 247

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC    ++    L + M    +    VT + ++ GLC+  +  EA  L  +M  +G  P
Sbjct: 248 YYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAP 307

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQM-----------------WL------------- 511
           + +TY T+I S  K    ++   LL +M                 WL             
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTL 367

Query: 512 -----HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
                 NL P   TY +LID LC   ++  A+ +L+ ++E +IS   V ++++I      
Sbjct: 368 RFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDY 591
           G + KA  +   M E+G   ++  Y
Sbjct: 428 GLLDKATEYKRMMKERGINPNVVTY 452



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 106/252 (42%), Gaps = 9/252 (3%)

Query: 22  MKELDLKVSIQTYNSLLYNL------RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQ 75
           M    L   I  YN+LL  L      R   ++  L + +     P  +  N++++ G C+
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVV--LEEMLGSGIAPDTITFNALIL-GHCK 741

Query: 76  QSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFS 135
            S L +A     +   +   P++ + N ++     +G    A  +   M K GL P+  +
Sbjct: 742 SSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLT 801

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           Y+IL  G     +  EA+    +M   G  P   TY+ L   F     ++ A ++ + + 
Sbjct: 802 YDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQ 861

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
            +G  P   TY +L+ G+ +I N  E  K  + M  +GF  +    S +  +  K G   
Sbjct: 862 KRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTW 921

Query: 256 EALGLLYEMEAV 267
           +A  LL  +  V
Sbjct: 922 QAQRLLKNLYRV 933



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 104/269 (38%), Gaps = 34/269 (12%)

Query: 398 RRLLDTIKLHGLEPSAVTY--------TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           RRL+  +   GL  +A+ +           + ++C    ++  +ALL+        PT V
Sbjct: 50  RRLIPALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTV 104

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ- 508
            Y +++  L        A  +L +M   GV  D +T NT++   C+   +  A  L ++ 
Sbjct: 105 AYNILLAALSDH---AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRG 161

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
             +H L+     +N LI G C  GD   A  +   +    + +  V Y T++   C  G 
Sbjct: 162 GGIHALDVIG--WNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEV 613
           V  A      M E G + ++  YT    ++C              M+ NG   D      
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           ++    + G     + L   M K G  P+
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPN 308


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 177/679 (26%), Positives = 303/679 (44%), Gaps = 53/679 (7%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVID 71
           A+ V+ +M    + + +  YNSL+    H+   D   ++ + +K      NV T + +I 
Sbjct: 206 ALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIG 265

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
             C+   + +A    +        P VV+L+A++   C+ G    A  LF  M K G+ P
Sbjct: 266 EYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAP 325

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           +  +Y  LI  L  A    E+L    +M   GV  D + Y+ L        +I  A  V+
Sbjct: 326 NHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVL 385

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           +        P+ VTYTVL+  +C+ GN++   ++   M  +    NV+ +S +++ + K 
Sbjct: 386 RHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKR 445

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G + +A   + +M+  G+ P++VTY  LI G  K      A+ +Y +M  + +  N+F  
Sbjct: 446 GCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVV 505

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
            +++ GL +   I  A   F  +     + D V Y  ++DG  K GN+  A ++ ++L+E
Sbjct: 506 DSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELME 565

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K +SP  V +N  I   C  GK ++A+  L  ++  GLEP   TY T + A C EG   +
Sbjct: 566 KNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSK 625

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT------ 485
            L LL+EM+  +I P  +TYT ++ GL +   +++A  LL +M   G  P  +T      
Sbjct: 626 ALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQ 685

Query: 486 -----------------------------YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
                                        YNT++   C     R A  +L++M    + P
Sbjct: 686 ACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAP 745

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            + T+N LI G C +  L NA  +   +    +S     + T++    + G + +A T  
Sbjct: 746 DTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVL 805

Query: 577 CQMVEKGFE-------ISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQG 621
             M + G E       I +  Y K          +C M+S GF P       ++  F + 
Sbjct: 806 SDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKA 865

Query: 622 GDLGSVFELAAVMIKSGLL 640
           G +    EL + M + G+L
Sbjct: 866 GMMNQAKELFSEMKRRGVL 884



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 159/589 (26%), Positives = 269/589 (45%), Gaps = 15/589 (2%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +IDG C+   +  A+  ++    +     VV  N++++ +   G A+ A  +   M   G
Sbjct: 193 LIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADG 252

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + P+  +Y  LI   C    M+EA      M R GV PD +T S L  G     Q S A+
Sbjct: 253 VEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAY 312

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            + +++   G  P+ VTY  LI    +     E L L   M+S+G  ++++ Y+ L+  +
Sbjct: 313 ALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRL 372

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
            K G+I+EA  +L   ++  + P+ VTY++L+   C+   +  A Q+  +M  K + PN 
Sbjct: 373 GKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNV 432

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
               +I+ GL ++  + +A  Y   +  S    +VV Y  +IDG+ K      A+ +YR 
Sbjct: 433 VTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRD 492

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           ++ + +  +    +SL+ G  KNG +  A  L   +   GL    V YTT M+   + GN
Sbjct: 493 MLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGN 552

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +     + QE+  K + P  V Y V I  LC   K  EA   L++M   G+ PDQ TYNT
Sbjct: 553 MPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNT 612

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I + C+     KA +LL +M  ++++P   TY  L+ GL   G +K A  LL  +    
Sbjct: 613 MIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAG 672

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM---------- 598
            + T + +  +++A          +     M+  G    I  Y      +          
Sbjct: 673 FAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNAT 732

Query: 599 -----MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                ML+ G  PD      +++   +   L + F + A M+  GL P+
Sbjct: 733 VVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPN 781



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 157/598 (26%), Positives = 277/598 (46%), Gaps = 17/598 (2%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I +  L +Q   + A   L E   +      V+++  +   C+ G    A  L  ++++
Sbjct: 119 NIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVR 178

Query: 127 -YGLHP-DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             G+   D   +N LI G C    M  AL     M   GV  D + Y+ L  GF      
Sbjct: 179 GRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDA 238

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +V++++   G +P++VTYT LI  YC+   ++E   L E M+  G   +V+  S L
Sbjct: 239 DAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSAL 298

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +C+ G+  EA  L  EM+ +G+ P+ VTY  LI  L K  +  +++ L  EM S+ +
Sbjct: 299 VDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGV 358

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             +   + A++  L ++  I EA+         N   + V Y +++D + + GNI  A Q
Sbjct: 359 VMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQ 418

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +  Q+ EK + P++VTF+S+I G  K G +  A   +  +K  G+ P+ VTY T ++ + 
Sbjct: 419 VLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFF 478

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +    +  L + ++M  + +   +     ++ GL K   ++ A  L +DM   G+  D +
Sbjct: 479 KFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHV 538

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y T++    K  ++  AF++  ++   NL P +  YN+ I+ LC  G    A   L  +
Sbjct: 539 NYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEM 598

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------------ 592
           +   +   +  Y T+I A C EG   KA+    +M     + ++  YT            
Sbjct: 599 RNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVV 658

Query: 593 -KSFFCM--MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            K+ F +  M S GF P     + +L A         + E+  +M+ +GL  D  + N
Sbjct: 659 KKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYN 716



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 247/507 (48%), Gaps = 2/507 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T S +I+GL ++  L  A  ++++       P+VV+   ++  + K    E A  ++
Sbjct: 431 NVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVY 490

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  G+  + F  + L++GL   G++E A     DM   G+  D + Y+ L  G    
Sbjct: 491 RDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKT 550

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A+KV Q+L+ K   PD V Y V I   C +G   E     + M + G + +   Y
Sbjct: 551 GNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATY 610

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++++ C+ G+  +AL LL EM+   +KP+L+TY+ L+ GL +   V KA  L NEM S
Sbjct: 611 NTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMAS 670

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIG 360
              +P S  H  +L   C      +  +    L+M   +  D+ +YN ++      G   
Sbjct: 671 AGFAPTSLTHQRVLQA-CSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMAR 729

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A  +  +++ + I+P  +TFN+LI G CK+  + +A  +   +   GL P+  T+ T +
Sbjct: 730 NATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLL 789

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
                 G I     +L +M+   + P ++TY +++ G  K+    EA++L  +M   G  
Sbjct: 790 GGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFI 849

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P   TYN+++  F K   + +A +L ++M    +  TS+TY+IL++G     +      L
Sbjct: 850 PKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRIL 909

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEG 567
           L  ++E     +K   +++ +A    G
Sbjct: 910 LKDMKELGFKPSKGTISSMSRAFSRPG 936



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 147/636 (23%), Positives = 272/636 (42%), Gaps = 34/636 (5%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           +L  + SR G+V D V   A M  L  +  I+    +L   RH        D+I    TP
Sbjct: 349 LLGEMVSR-GVVMDLVMYTALMDRLGKEGKIEEAKDVL---RHAQ-----SDNI----TP 395

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N  T ++++D  C+   +  A   L +   K   P+VV+ ++I++   K G    A   
Sbjct: 396 -NFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADY 454

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M   G+ P+  +Y  LI G       E AL+   DM   GVE +      L  G   
Sbjct: 455 MRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRK 514

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              I GA  + + +  +G   D V YT L+ G  + GN+    K+ + ++ +    + + 
Sbjct: 515 NGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVV 574

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+V ++ +C  G+  EA   L EM   GL+PD  TY+ +I   C++ K  KA++L  EM 
Sbjct: 575 YNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMK 634

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
              I PN   +  +++GL E  ++ +A+   + +  +      + +  ++          
Sbjct: 635 RNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPD 694

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
             ++++  ++   +   I  +N+L++  C +G   +A  +LD +   G+ P  +T+   +
Sbjct: 695 VILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALI 754

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             +C+  ++    A+  +M  + + P   T+  ++ GL    ++ EA  +L DM  +G+ 
Sbjct: 755 LGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLE 814

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ +TY+ ++  + K  +  +A +L  +M      P ++TYN L+      G +  A  L
Sbjct: 815 PNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKEL 874

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
              ++   +  T   Y  ++                   +  G E+ I          M 
Sbjct: 875 FSEMKRRGVLHTSSTYDILLNG--------------WSKLRNGIEVRI------LLKDMK 914

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
             GF P +     M  AF + G  G    L   + K
Sbjct: 915 ELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFK 950



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 225/508 (44%), Gaps = 38/508 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVY 64
           + G +  A   + KMK+  +  ++ TY +L+   +  +  +   D+Y D+       N +
Sbjct: 444 KRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNF 503

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
               +++GL +   ++ A    ++   +      V+   +M    K G    A  +   +
Sbjct: 504 VVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQEL 563

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++  L PDA  YN+ I+ LC  G   EA  F  +M   G+EPD  TY+ +        + 
Sbjct: 564 MEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKT 623

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG---------------------- 222
           S A K+++++      P+++TYT L+ G  + G V++                       
Sbjct: 624 SKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRV 683

Query: 223 -------------LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
                        L++ E+M+  G   ++  Y+ L+  +C  G    A  +L EM   G+
Sbjct: 684 LQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGI 743

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            PD +T++ LI G CK   +  A  +Y +M  + +SPN      +L GL     I EA  
Sbjct: 744 APDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADT 803

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               +       + + Y+I++ GY K  N  EA++LY +++ K   P   T+NSL+  F 
Sbjct: 804 VLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFA 863

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K G +  A+ L   +K  G+  ++ TY   +N + +  N   +  LL++M+     P+  
Sbjct: 864 KAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKG 923

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T + + +   +     EA +LL+ ++ +
Sbjct: 924 TISSMSRAFSRPGMTGEARRLLKTLFKV 951


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 159/565 (28%), Positives = 263/565 (46%), Gaps = 18/565 (3%)

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP-DAFSYNILIHGLCIAGSMEEALEFTN 157
           V++N +++  C+ G  + A  L       G+H  D   +N LI G C  G    AL   +
Sbjct: 136 VTVNTLLAGLCRNGQVDAAAAL--ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVAD 193

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            M   G+  D + Y+ L  GF    Q+  A  V+  +   G DP++ TYT  I  YC+  
Sbjct: 194 RMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTK 253

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            VEE   L E M+  G  L+V+  S L++ +C+ GR  EA  L  EM+ VG  P+ VTY 
Sbjct: 254 GVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYC 313

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            LI  L K  +  + + L  EM S+ +  +   + A++  L ++    E +      +  
Sbjct: 314 TLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSD 373

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
           N   + V Y ++ID   K  N+ EA Q+  ++ EK ISP++VTF+S+I GF K G +  A
Sbjct: 374 NLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA 433

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
                 +K  G+ P+ VTY T ++ + +       L +  +M  + +         ++ G
Sbjct: 434 TEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNG 493

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           L +  K++EA+ L +D    G++ D + Y T+I    K  D+  AF+   ++   N+ P 
Sbjct: 494 LRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPD 553

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
           +  YN+ I+ LC+ G  K A  +L  ++   +   +  Y T+I +HC +G+  KA+    
Sbjct: 554 AVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLH 613

Query: 578 QM---------------VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           +M               V   F     +  K     M+S GF P       +L A  Q  
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673

Query: 623 DLGSVFELAAVMIKSGLLPDKFLIN 647
            L  + ++   M+ +GL  D  + N
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYN 698



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 161/634 (25%), Positives = 290/634 (45%), Gaps = 45/634 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNS-LLYNLRHTDI--MWDLYDDIKVSETPRN 62
           + R G V  A  V+  MKE  +  ++ TY   ++Y  R   +   +DLY+ +  +    +
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQET-----------------------AGKEF----G 95
           V T S ++ GLC+  R  +A    +E                         GKE     G
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 96  PSV--------VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
             V        V+  A+M    K G  +  K      L   L  +  +Y +LI  LC A 
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAH 393

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           +++EA +   +M    + P+ +T+S +  GF     +  A +  + +  +G +P++VTY 
Sbjct: 394 NVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYG 453

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            LI G+ +    +  L++   ML +G ++N      L++ + ++G+I+EA+ L  +    
Sbjct: 454 TLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGS 513

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL  D V Y+ LI GL K   +  A +   E+  + + P++  +   +  LC      EA
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEA 573

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           +     +       D   YN MI  + + G   +A++L  ++    I P+++T+N+L+ G
Sbjct: 574 KSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
               G V  A+ LL+ +   G  PS++T+   + A  +   +  +L + + M    +   
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
              Y  +++ LC     ++A  +LE+M   G+ PD IT+N +I   CK   L  AF    
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           QM   N+ P  AT+N L+ GL   G +  A  +L+ +++  +    + Y  ++  H  + 
Sbjct: 754 QMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQS 813

Query: 568 DVHKAMTFFCQMVEKGF--EIS-----IRDYTKS 594
           +  +AM  +C+MV KGF  ++S     I D+TK+
Sbjct: 814 NKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 233/518 (44%), Gaps = 35/518 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T S VI+G  ++  L  A  + +    +   P+VV+   ++  + K    + A  ++
Sbjct: 413 NVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVY 472

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  G+  + F  + L++GL   G +EEA+    D    G+  D + Y+ L  G    
Sbjct: 473 HDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKA 532

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A+K  Q+L+ +   PD V Y V I   C +G  +E   +   M + G K +   Y
Sbjct: 533 GDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTY 592

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++ S C+ G   +AL LL+EM+   +KP+L+TY+ L+ GL     V KA  L NEM S
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 302 KRISPNSFAHGAILLG-----------------------------------LCEKEMITE 326
              SP+S  H  +L                                     LC   M  +
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A +  + ++ S    D + +N +I G+ K  ++  A   Y Q++ + ISP+I TFN+L+ 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G    G++ +A  +L  ++  GLEP+ +TY   +  + ++ N    + L  EM  K   P
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVP 832

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              TY  +I    K   + +A +L +DM   GV P   TY+ ++  + + ++  +  + L
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCL 892

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
             M      P+  T + +       G    A  LL +L
Sbjct: 893 KDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/541 (25%), Positives = 241/541 (44%), Gaps = 35/541 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T +++ID LC+   + +A   L E   K   P+VV+ +++++ + K G  + A    
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYK 437

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M + G++P+  +Y  LI G       + ALE  +DM   GVE +      L  G    
Sbjct: 438 RMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQN 497

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  + +     G   D V YT LI G  + G++    K  + ++ +    + + Y
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +V ++ +C  G+  EA  +L EM  +GLKPD  TY+ +I   C++ +  KA++L +EM  
Sbjct: 558 NVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSL--------------IMSNCIQ------ 341
             I PN   +  ++ GL     + +A+   + +              ++  C Q      
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 342 ---------------DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
                          D+ +YN ++      G   +A  +  +++   I+P  +TFN+LI 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G CK+  + +A      +    + P+  T+ T +      G I     +L EME   + P
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
            ++TY +++ G  KQ    EA++L  +M   G  P   TYN +I  F K   + +A +L 
Sbjct: 798 NNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELF 857

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
             M    + PTS TY+IL+ G     +       L  ++E   S +K   + I +A    
Sbjct: 858 KDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKP 917

Query: 567 G 567
           G
Sbjct: 918 G 918



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 239/508 (47%), Gaps = 3/508 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           + + G++  A      MKE  +  ++ TY +L+   +  +  D   ++Y D+       N
Sbjct: 424 FVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVN 483

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +    +++GL Q  ++++A+   ++ +G       V+   ++    K G    A     
Sbjct: 484 KFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQ 543

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ++   + PDA  YN+ I+ LCI G  +EA     +M   G++PD  TY+ +        
Sbjct: 544 ELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKG 603

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           + + A K++ ++ +    P+++TY  L+ G    G VE+   L   M+S GF  + + + 
Sbjct: 604 ETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +L +  +S R+D  L +   M   GL  D+  Y+ L++ LC      KA  +  EM   
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I+P++    A++LG C+   +  A   +  ++  N   ++  +N ++ G   +G IGEA
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +  ++ +  + P+ +T++ L+ G  K     +A RL   +   G  P   TY   ++ 
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           + + G + +   L ++M+ + + PT  TY +++ G  +     E  + L+DM   G +P 
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPS 903

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           + T + I R+F K     +A +LL  ++
Sbjct: 904 KGTLSFICRAFSKPGMTWQAQRLLKNLY 931



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 175/385 (45%), Gaps = 44/385 (11%)

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL S C+   +  A+ LL        +P  V Y+IL+  L   D  H A  +  EMC 
Sbjct: 77  NALLYSHCRLRLLRPAIALLRSS-----RPTTVAYNILLAAL--SDHAH-APAVLAEMCK 128

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + +  +      +L GLC    +  A    D     + + DV+ +N +I GY ++G+   
Sbjct: 129 RGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPA 187

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ +  ++  + +   +V +N+L+ GFC+ G+V  AR +LD +K  G++P+  TYT F+ 
Sbjct: 188 ALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIV 247

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC    ++    L + M    +    VT + ++ GLC+  +  EA  L  +M  +G  P
Sbjct: 248 YYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVP 307

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQM-----------------WL------------- 511
           + +TY T+I S  K    ++   LL +M                 WL             
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTL 367

Query: 512 -----HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
                 NL     TY +LID LC   ++  A+ +L+ ++E +IS   V ++++I      
Sbjct: 368 RFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDY 591
           G + KA  +   M E+G   ++  Y
Sbjct: 428 GLLDKATEYKRMMKERGINPNVVTY 452



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 107/252 (42%), Gaps = 9/252 (3%)

Query: 22  MKELDLKVSIQTYNSLLYNL------RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQ 75
           M    L   I  YN+LL  L      R   ++  L + +     P  +  N++++ G C+
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVV--LEEMLGSGIAPDTITFNALIL-GHCK 741

Query: 76  QSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFS 135
            S L +A     +   +   P++ + N ++     +G    A  +   M K GL P+  +
Sbjct: 742 SSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLT 801

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           Y+IL+ G     +  EA+    +M   G  P   TY+ L   F     ++ A ++ + + 
Sbjct: 802 YDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQ 861

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
            +G  P   TY +L+ G+ +I N  E  K  + M  +GF  +    S +  +  K G   
Sbjct: 862 KRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTW 921

Query: 256 EALGLLYEMEAV 267
           +A  LL  +  V
Sbjct: 922 QAQRLLKNLYRV 933



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 105/269 (39%), Gaps = 34/269 (12%)

Query: 398 RRLLDTIKLHGLEPSAVTY--------TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           RRL+  +   GL  +A+ +           + ++C    ++  +ALL+        PT V
Sbjct: 50  RRLIPALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTV 104

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ- 508
            Y +++  L        A  +L +M   GV  D +T NT++   C+   +  A  L ++ 
Sbjct: 105 AYNILLAALSDH---AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRG 161

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
             +H L+     +N LI G C  GD   A  +   +    + +  V Y T++   C  G 
Sbjct: 162 GGIHALDVIG--WNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEV 613
           V  A      M E G + ++  YT    ++C              M+ NG   D      
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           ++    + G     + L   M K G +P+
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAVPN 308


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 243/466 (52%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + ++   C+   +Q A+  + +   +   PS V+ N +++   K G  + AKGL  
Sbjct: 237 VTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQ 296

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K GL    ++YN LI G C  G + EAL    +M   GV P   +++ +  GF    
Sbjct: 297 EMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEG 356

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++S A + +  +L K   PDI++Y  LI G+C++GN+ E   L + +  +    N++ Y+
Sbjct: 357 KMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYN 416

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +C+ G ++ AL L  +M   G+ PD+VTY++L+ G CK   +  A + ++EM   
Sbjct: 417 TLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHV 476

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            ++P+ FA+ A ++G  +     +A    + ++      DV+ YN+ ++G  KLGN+ EA
Sbjct: 477 GLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEA 536

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +L +++I     P  VT+ S ++   +NG + + R +   +   G  P+ VTYT  ++A
Sbjct: 537 GELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHA 596

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +   G +   +A   EM+ K + P  +TY V+I G CK  K+ +A +   +M   G+ P+
Sbjct: 597 HALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPN 656

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           + TY  +I   C     ++A +L  QM    + P S T+  L+  L
Sbjct: 657 KYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKL 702



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 240/500 (48%)

Query: 83  ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
           +L  ++     F P V + N I+           A  ++ +M +YG+ P   +YN ++H 
Sbjct: 187 LLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHS 246

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
            C  G ++ AL+    M   G  P  +T+++L  G     ++  A  +IQ++   G    
Sbjct: 247 FCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVS 306

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
             TY  LICGYC+ G + E L L E M+++G    V +++ ++   CK G++ +A   L 
Sbjct: 307 PYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLS 366

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           +M    L PD+++Y+ LI G C+   + +A  L +E+  + +S N   +  ++ GLC   
Sbjct: 367 DMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLG 426

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            +  A    + +I      DVV Y ++++G  KLGN+  A + + +++   ++P    + 
Sbjct: 427 DLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYT 486

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           + I G  K G  A A +L + +   G  P  +TY  F+N  C+ GN++    LLQ+M   
Sbjct: 487 ARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRD 546

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
              P HVTYT  +    +   L+E  ++  DM   G TP  +TY  +I +      L  A
Sbjct: 547 GHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWA 606

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
                +M    + P   TYN+LI+G C    +  A    + +QE  I   K  YT +I  
Sbjct: 607 MAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINE 666

Query: 563 HCAEGDVHKAMTFFCQMVEK 582
           +C  G   +A+  + QM+ K
Sbjct: 667 NCNMGKWQEALRLYAQMLGK 686



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 232/473 (49%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F  M++    PD  + N ++  L     + +ALE    MG +G+ P   TY+ +   F 
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A  ++ K+  +G  P  VT+ VLI G  + G +++   L + M   G +++  
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L+   CK G + EAL L  EM   G+ P + +++ ++ G CK+ K+  A Q  ++M
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K + P+  ++  ++ G C    I EA +  D L   N   ++V YN +IDG  +LG++
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A++L   +I + I P +VT+  L+ G CK G +  A+   D +   GL P    YT  
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTAR 488

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +    + G+  +   L +EM TK   P  +TY V + GLCK   L+EA +LL+ M   G 
Sbjct: 489 IVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGH 548

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD +TY + + +  +   LR+  ++   M      PT  TY +LI    +NG L  A  
Sbjct: 549 VPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMA 608

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             + +QE  +    + Y  +I   C    + +A  FF +M EKG   +   YT
Sbjct: 609 YFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYT 661



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 235/476 (49%), Gaps = 4/476 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           + + G V  A+ ++ KM+E     S  T+N L+  L     +     L  ++  +    +
Sbjct: 247 FCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVS 306

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            YT + +I G C++  L +A+   +E   +   P+V S N IM  +CK G    A+    
Sbjct: 307 PYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLS 366

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            MLK  L PD  SYN LI+G C  G++ EA    +++    +  + +TY+ L  G   L 
Sbjct: 367 DMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLG 426

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A K+ + ++ +G  PD+VTYTVL+ G C++GN+    +  + ML  G   +  AY+
Sbjct: 427 DLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYT 486

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             +    K G   +A  L  EM   G  PD++TY++ + GLCK   + +A +L  +M   
Sbjct: 487 ARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRD 546

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P+   + + +    E   + E R  F  ++       VV Y ++I  +   G +  A
Sbjct: 547 GHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWA 606

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +  + ++ EK + P+++T+N LI GFCK  K+  A +    ++  G+ P+  TYT  +N 
Sbjct: 607 MAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINE 666

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            C  G  Q  L L  +M  K I P   T+  ++K L K +K+Q AVQ +E + + G
Sbjct: 667 NCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQ-AVQFIESLILDG 721



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 182/368 (49%), Gaps = 15/368 (4%)

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
           ++ + ++ +M   R  P+      IL  L +K ++ +A   +  +        V  YN M
Sbjct: 184 YQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTM 243

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           +  + K G +  A+ L  ++ E+   PS VTFN LI G  K G++  A+ L+  +   GL
Sbjct: 244 LHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGL 303

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
             S  TY   +  YC++G +   LAL +EM T+ + PT  ++  ++ G CK+ K+ +A Q
Sbjct: 304 RVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQ 363

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
            L DM    + PD I+YNT+I  FC+  ++ +AF LL+++   NL     TYN LIDGLC
Sbjct: 364 QLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLC 423

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF----- 584
             GDL+ A  L   +    I    V YT ++   C  G++  A  FF +M+  G      
Sbjct: 424 RLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQF 483

Query: 585 --------EISIRDYTKSFFCM--MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
                   E+ + D  K+F     ML+ GFPPD     V +    + G+L    EL   M
Sbjct: 484 AYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKM 543

Query: 635 IKSGLLPD 642
           I+ G +PD
Sbjct: 544 IRDGHVPD 551


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 240/485 (49%), Gaps = 7/485 (1%)

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
           A+ A   F  M      P  F +N ++  L        A+     M    VEPD  T +I
Sbjct: 39  ADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNI 98

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +   F    Q+  A+  + K+L  G  P+ +T   L+ G C  G V+E L+  + +L+QG
Sbjct: 99  IINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQG 158

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
           F+L+ I+Y +L++ +CK G    A+ LL  +E   ++P++V YS++I  LCK   V +A 
Sbjct: 159 FRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAY 218

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            LY EM  K ISP+   +  ++ G C    +  A    + +++ N   D+  Y I++D  
Sbjct: 219 DLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDAL 278

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K G + EA  +   +++  ++  +V +++L+ G+C   +V +A+R+  T+   G+ P  
Sbjct: 279 CKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDV 338

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
             Y+  +N  C+   +   L L +E+  K + P  VTYT +I  LCK  ++     L ++
Sbjct: 339 HCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDE 398

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G  PD ITYN +I + CK   L +A  L N+M    + P   T+ IL+DGLC  G 
Sbjct: 399 MLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGR 458

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEI 586
           LKNA      L      L    YT +I   C EG + +A+    +M + G       FEI
Sbjct: 459 LKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEI 518

Query: 587 SIRDY 591
            IR +
Sbjct: 519 MIRAF 523



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 243/470 (51%), Gaps = 1/470 (0%)

Query: 56  VSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
           V  TP   + N I+I  L    R   AI   ++    E  P   +LN I++ +C  G   
Sbjct: 52  VHPTPHTFHFNKILI-SLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVV 110

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
           +A      +LK G  P+  + N L+ GLC+ G ++EAL F + +   G     I+Y IL 
Sbjct: 111 LAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILI 170

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            G   + +   A ++++++      P++V Y+++I   C+   V+E   L   M+ +G  
Sbjct: 171 NGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGIS 230

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +V+ YS+L+S  C  G+++ A+ LL EM    + PD+ TY+IL+  LCK+ KV +A  +
Sbjct: 231 PDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENV 290

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
              M    ++ +   +  ++ G C    +  A+  F ++       DV  Y+IMI+G  K
Sbjct: 291 LAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCK 350

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +  + EA+ L+ ++ +K + P  VT+ SLI   CK+G+++    L D +   G  P  +T
Sbjct: 351 IKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVIT 410

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y   ++A C+ G++ R +AL  +M+ +AI P   T+T+++ GLCK  +L+ A++  +D+ 
Sbjct: 411 YNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLL 470

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
             G   +  TY  +I   CK   L +A  L ++M  +     + T+ I+I
Sbjct: 471 TKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMI 520



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 241/472 (51%)

Query: 38  LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPS 97
           L N++       LY  +++SE   + +T +I+I+  C   ++  A   + +     + P+
Sbjct: 68  LVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPN 127

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
            ++LN +M   C  G  + A      +L  G      SY ILI+G+C  G    A+    
Sbjct: 128 TITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLR 187

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            + R  + P+ + YS++       + +  A+ +  +++ KG  PD+VTY++L+ G+C +G
Sbjct: 188 RIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVG 247

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            +   + L   M+ +    ++  Y++L+ ++CK G++ EA  +L  M    +  D+V YS
Sbjct: 248 QLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYS 307

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            L+ G C  ++V+ A +++  M    ++P+   +  ++ GLC+ + + EA   F+ +   
Sbjct: 308 TLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQK 367

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
           N + D V Y  +ID   K G I     L+ +++++   P ++T+N+LI   CKNG +  A
Sbjct: 368 NMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRA 427

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             L + +K   + P+  T+T  ++  C+ G ++  L   Q++ TK       TYTV+I G
Sbjct: 428 IALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMING 487

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           LCK+  L EA+ L   M   G   D +T+  +IR+F    +  KA +L+ +M
Sbjct: 488 LCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREM 539



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 229/426 (53%), Gaps = 1/426 (0%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K+   P  +  N++ + GLC + ++++A+ F  +   + F  S +S   +++  CK+G 
Sbjct: 120 LKLGYQPNTITLNTL-MKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGE 178

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A  L   + ++ + P+   Y+++I  LC    ++EA +   +M   G+ PD +TYSI
Sbjct: 179 TRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSI 238

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L  GF ++ Q++ A  ++ +++++  +PDI TYT+L+   C+ G V+E   +  VM+   
Sbjct: 239 LVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKAC 298

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
             L+V+ YS L+   C    ++ A  + Y M  +G+ PD+  YSI+I GLCK  +V +A+
Sbjct: 299 VNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEAL 358

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            L+ E+  K + P++  + +++  LC+   I+     FD ++      DV+ YN +ID  
Sbjct: 359 NLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDAL 418

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K G++  A+ L+ ++ ++ I P++ TF  L+ G CK G++ +A      +   G   + 
Sbjct: 419 CKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNV 478

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            TYT  +N  C+EG +   LAL   ME        VT+ ++I+    + +  +A +L+ +
Sbjct: 479 RTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVRE 538

Query: 474 MYVIGV 479
           M   G+
Sbjct: 539 MIARGL 544



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/541 (25%), Positives = 247/541 (45%), Gaps = 25/541 (4%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAG---SMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           +CL L     P  F  N+  H   +     + ++A+   N M      P    ++ +   
Sbjct: 9   YCLSLSIPNFP-PFLPNLCFHSHSLPPLTHNADDAVSQFNHMFHVHPTPHTFHFNKILIS 67

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
              + +   A  + +++ +   +PD  T  ++I  +C  G V         +L  G++ N
Sbjct: 68  LVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPN 127

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            I  + L+  +C  G++ EAL    ++ A G +   ++Y ILI G+CK  +   AI+L  
Sbjct: 128 TITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLR 187

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            +    I PN   +  I+  LC+  ++ EA   +  ++      DVV Y+I++ G+  +G
Sbjct: 188 RIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVG 247

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            +  A+ L  +++ + I+P I T+  L+   CK GKV +A  +L  +    +    V Y+
Sbjct: 248 QLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYS 307

Query: 418 TFMNAYC---EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           T M+ YC   E  N +R+   + +M    + P    Y+++I GLCK  ++ EA+ L E++
Sbjct: 308 TLMDGYCLVNEVNNAKRVFYTMTQM---GVTPDVHCYSIMINGLCKIKRVDEALNLFEEI 364

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
           +   + PD +TY ++I   CK   +   + L ++M      P   TYN LID LC NG L
Sbjct: 365 HQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHL 424

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK- 593
             A  L   +++  I      +T ++   C  G +  A+ FF  ++ KG+ +++R YT  
Sbjct: 425 DRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVM 484

Query: 594 --------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                         +    M  NG   D    E+M+ AF    +     +L   MI  GL
Sbjct: 485 INGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544

Query: 640 L 640
           L
Sbjct: 545 L 545



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 186/368 (50%), Gaps = 3/368 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G    A+ ++ +++   ++ ++  Y+ ++  L      D  +DLY ++       +V 
Sbjct: 175 KIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVV 234

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T SI++ G C   +L  AI  L E   +   P + +   ++   CK G  + A+ +  +M
Sbjct: 235 TYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVM 294

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +K  ++ D   Y+ L+ G C+   +  A      M + GV PD   YSI+  G   + ++
Sbjct: 295 VKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRV 354

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  + +++  K   PD VTYT LI   C+ G +     L + ML +G   +VI Y+ L
Sbjct: 355 DEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNL 414

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           + ++CK+G +D A+ L  +M+   ++P++ T++IL+ GLCK  ++  A++ + ++ +K  
Sbjct: 415 IDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGY 474

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             N   +  ++ GLC++ ++ EA      +  + CI D V + IMI  +       +A +
Sbjct: 475 CLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEK 534

Query: 365 LYRQLIEK 372
           L R++I +
Sbjct: 535 LVREMIAR 542



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 38/267 (14%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y     V++A  V   M ++ +   +  Y+ ++  L   +  D   +L+++I       +
Sbjct: 313 YCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPD 372

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +ID LC+  R+        E   +   P V++ N ++   CK G  + A  LF 
Sbjct: 373 TVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFN 432

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M    + P+ +++ IL+ GLC  G ++ ALEF  D+              L KG+ L  
Sbjct: 433 KMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDL--------------LTKGYCL-- 476

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
                              ++ TYTV+I G C+ G ++E L L+  M   G   + + + 
Sbjct: 477 -------------------NVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFE 517

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGL 269
           +++ +       D+A  L+ EM A GL
Sbjct: 518 IMIRAFFDKDENDKAEKLVREMIARGL 544


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 145/495 (29%), Positives = 243/495 (49%), Gaps = 32/495 (6%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR-YCKLGFAEVAKGLFCLML 125
           ++V+  L +     DA+   +    ++  P       + +R  C+LG A  A  L   M 
Sbjct: 143 NVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMA 202

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           ++G  PDA  Y  +IH LC  G + EA    N+M   G   D  T+  + +G   L ++ 
Sbjct: 203 RHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVR 262

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQI----------------------------- 216
            A +++ +++ KG  P ++TY  L+ G C++                             
Sbjct: 263 EAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCL 322

Query: 217 --GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
             G + E  +L E M  +G + +   YS+L+  +CK GRI  A+ LL EME  G  P++V
Sbjct: 323 AEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVV 382

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+I++   CK         L  EM +K ++ NS  +  ++  LC+   + EA      +
Sbjct: 383 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 442

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
               C  D+  YN +I        + EA  ++  L+E+ +  + +T+N++I+   ++G+ 
Sbjct: 443 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRW 502

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            DA RL   + LHG     V+Y   + A C++GN+ R L LL+EM  K I P +V+Y ++
Sbjct: 503 QDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNIL 562

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I  LCK+ ++++A++L + M   G+ PD +TYNT+I   CK   +  A  LL ++   N+
Sbjct: 563 ISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENV 622

Query: 515 EPTSATYNILIDGLC 529
            P   TYNILI   C
Sbjct: 623 HPDIITYNILISWHC 637



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 250/521 (47%), Gaps = 35/521 (6%)

Query: 23  KELDLKVSIQTYNSLLYNLRHTDIMWD---LYDD-IKVSETPRNVYTNSIVIDGLCQQSR 78
           +   ++ S ++YN +L  L   D   D   LY   +     P   +T  +    LC+  R
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGR 190

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
             +A+  L+  A     P  V    ++   C  G    A  L   ML  G   D  +++ 
Sbjct: 191 ANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ--------------- 183
           ++ G+C  G + EA    + M   G  P  +TY  L +G   + Q               
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN 310

Query: 184 ----------------ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
                           ++ A ++ + + +KG  PD  TY++L+ G C++G +   ++L  
Sbjct: 311 VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLR 370

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M  +GF  NV+ Y+++L S CK+G  D+   LL EM A GL  +   Y+ +I  LCK  
Sbjct: 371 EMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDG 430

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           ++ +A+ L  EM S+  +P+  ++  I+  LC  E + EA   F++L+    + + + YN
Sbjct: 431 RMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYN 490

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I   ++ G   +AV+L +++I    S  +V++N LI   CK+G V  +  LL+ +   
Sbjct: 491 TIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 550

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G++P+ V+Y   ++  C+E  ++  L L ++M  + + P  VTY  +I GLCK   +  A
Sbjct: 551 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAA 610

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           + LLE ++   V PD ITYN +I   CK + L  A  LLN+
Sbjct: 611 LNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 226/468 (48%), Gaps = 5/468 (1%)

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLLSQI 184
           ++G+ P   SYN+++  L  A    +AL     M  R  V P   T+ + A+    L + 
Sbjct: 132 RFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRA 191

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A  +++ +   G  PD V Y  +I   C  G V E   L   ML  G   +V  +  +
Sbjct: 192 NEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDV 251

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  MC  GR+ EA  L+  M   G  P ++TY  L++GLC+  +  +A      M  +  
Sbjct: 252 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRVP 307

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             N      ++ G   +  + EA   ++++ +  C  D   Y+I++ G  KLG I  AV+
Sbjct: 308 ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVR 367

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L R++ +K  +P++VT+  +++ FCKNG   D R LL+ +   GL  ++  Y   + A C
Sbjct: 368 LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 427

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           ++G +   + L+QEM ++   P   +Y  +I  LC   +++EA  + E++   GV  + I
Sbjct: 428 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 487

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TYNTII +  +    + A +L  +M LH       +YN LI  +C +G++  +  LL  +
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            E  I    V+Y  +I   C E  V  A+    QM+ +G    I  Y 
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 595



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 141/546 (25%), Positives = 245/546 (44%), Gaps = 53/546 (9%)

Query: 84  LFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLML-KYGLHPDAFSYNILI 140
           L L +   + FG  PS  S N ++S   +      A  L+  M+ +  + P  F++ +  
Sbjct: 123 LHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAA 182

Query: 141 HGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
             LC  G   EAL     M RHG  PDA+ Y  +         ++ A  ++ ++L+ G  
Sbjct: 183 RALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCA 242

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
            D+ T+  ++ G C +G V E  +L + M+++G    V+ Y  LL  +C+  + DEA  +
Sbjct: 243 ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM 302

Query: 261 LYEMEAVGLKPDL--VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
           L      G  P+L  V ++ +I G   + K+ +A +LY  M  K   P++  +  ++ GL
Sbjct: 303 L------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C+   I+ A      +       +VV Y I++  + K G   +   L  ++  K ++ + 
Sbjct: 357 CKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP--------------------------- 411
             +N +IY  CK+G++ +A  L+  ++  G  P                           
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 476

Query: 412 --------SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
                   + +TY T ++A   +G  Q  + L +EM         V+Y  +IK +CK   
Sbjct: 477 LLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGN 536

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           +  ++ LLE+M   G+ P+ ++YN +I   CK + +R A +L  QM    L P   TYN 
Sbjct: 537 VDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNT 596

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC-------AEGDVHKAMTFF 576
           LI+GLC  G +  A  LL  L   N+    + Y  +I  HC       A   +++AM   
Sbjct: 597 LINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAV 656

Query: 577 CQMVEK 582
           C + ++
Sbjct: 657 CPVGDR 662



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 170/344 (49%), Gaps = 36/344 (10%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +LY+ + +     + +T SI++ GLC+  R+  A+  L+E   K F P+VV+   ++  +
Sbjct: 332 ELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSF 391

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK G  +  + L   M   GL  ++  YN +I+ LC  G M+EA+    +M   G  PD 
Sbjct: 392 CKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDI 451

Query: 169 ITYSI----------LAKGFHLLSQI---------------------SGAW----KVIQK 193
            +Y+           + +  H+   +                      G W    ++ ++
Sbjct: 452 CSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKE 511

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +++ G   D+V+Y  LI   C+ GNV+  L L E M  +G K N ++Y++L+S +CK  R
Sbjct: 512 MILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR 571

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           + +AL L  +M   GL PD+VTY+ LI GLCK   +H A+ L  ++ ++ + P+   +  
Sbjct: 572 VRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNI 631

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNC-IQDVVLYNIMIDGYVKL 356
           ++   C+  ++ +A M  +  + + C + D  +  I+ D   KL
Sbjct: 632 LISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPDKNFKL 675



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 137/293 (46%), Gaps = 32/293 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + + GM  D   ++ +M    L ++ Q YN ++Y                          
Sbjct: 391 FCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY-------------------------- 424

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
                  LC+  R+ +A+  +QE   +   P + S N I+   C     E A+ +F  +L
Sbjct: 425 ------ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL 478

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G+  +  +YN +IH L   G  ++A+    +M  HG   D ++Y+ L K       + 
Sbjct: 479 EEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVD 538

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            +  +++++  KG  P+ V+Y +LI   C+   V + L+L + ML+QG   +++ Y+ L+
Sbjct: 539 RSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLI 598

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + +CK G +  AL LL ++    + PD++TY+ILI   CK   +  A  L N 
Sbjct: 599 NGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 49/321 (15%)

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           YN+++    +     +A+ LYR+++ + R+ P+  TF       C+ G+  +A  LL  +
Sbjct: 142 YNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGM 201

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
             HG  P AV Y T ++A C++G +     LL EM          T+  V++G+C   ++
Sbjct: 202 ARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRV 261

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD-------------------------- 498
           +EA +L++ M   G  P  +TY  +++  C+ +                           
Sbjct: 262 REAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGC 321

Query: 499 -----LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
                L +A +L   M L   +P + TY+IL+ GLC  G + +A  LL  +++   +   
Sbjct: 322 LAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNV 381

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM--------------- 598
           V YT ++ + C  G          +M  KG  ++ + Y    + +               
Sbjct: 382 VTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQE 441

Query: 599 MLSNGFPPDQEICEVMLIAFH 619
           M S G  PD  IC    I +H
Sbjct: 442 MRSQGCNPD--ICSYNTIIYH 460



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 3/216 (1%)

Query: 4   FVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETP 60
           +   + G + +A+ +I +M+       I +YN+++Y+L + + M +   +++++      
Sbjct: 424 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 483

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N  T + +I  L +  R QDA+   +E         VVS N ++   CK G  + +  L
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 543

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M + G+ P+  SYNILI  LC    + +ALE +  M   G+ PD +TY+ L  G   
Sbjct: 544 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           +  +  A  +++KL  +   PDI+TY +LI  +C++
Sbjct: 604 MGWMHAALNLLEKLHNENVHPDIITYNILISWHCKV 639


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 251/524 (47%), Gaps = 2/524 (0%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L DA+            PS+V    I++   K+        L   M  +G+  + ++ N+
Sbjct: 55  LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI+  C    +  A      + + G +PD  +++ L KG  L  QI  A  +  K++ +G
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD+V Y  LI G C+ G+    ++L   M     + +V+ Y  L+ S+CK  +  +A 
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L  EM   G+ P++VT + L+  LC   +      L NEM   +I PN+ +   ++  L
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDAL 294

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++ M+ +A    D +  S    DVV Y  +IDG+     + EAV+++  ++ K  +P++
Sbjct: 295 CKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNV 354

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            ++N+LI G+CK  ++  A  L + +    L P+ VTY T ++  C  G +Q  +AL +E
Sbjct: 355 FSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFRE 414

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M      P  VTY +++  LCK   L +A+ LL+ +    + PD   Y  +I   C+  +
Sbjct: 415 MVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGE 474

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L  A  L + +    L+P   TYNI+  GLC  G L  A  L + + E+  S     Y T
Sbjct: 475 LEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNT 534

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
           I +      +  +A+    +M+ +GF   +   T +    MLS+
Sbjct: 535 ITQGFLRNNETSRAIQLLEEMLARGFSCDVS--TTTLLVGMLSD 576



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 234/486 (48%), Gaps = 8/486 (1%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           N   S+Y      + A   F  ML     P    +  ++  +         L  +  M  
Sbjct: 43  NRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDS 102

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            G+  +  T ++L   F  L++++ A+ V+ K+L  G  PD  ++T LI G C  G + E
Sbjct: 103 FGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGE 162

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            L L + M+ +GF+ +V+ Y+ L++ +CK+G    A+ LL  ME    +PD+V Y  LI 
Sbjct: 163 ALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIH 222

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE----KEMITEARMYFDSLIMS 337
            LCK  +  +A  L++EM +K ISPN     +++  LC     K + T      DS IM 
Sbjct: 223 SLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMP 282

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
           N I        ++D   K G + +A  +   + +  + P +VT+ +LI G C   ++ +A
Sbjct: 283 NAIS----LTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEA 338

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
            ++ D +   G  P+  +Y T +N YC+   + + + L +EM  + + P  VTY  +I G
Sbjct: 339 VKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHG 398

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LC   +LQ+A+ L  +M   G  PD +TY  ++   CK   L KA  LL  +   NL+P 
Sbjct: 399 LCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPD 458

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
              Y I+IDG+C  G+L++A  L  +L    +      Y  +    C  G + +A   F 
Sbjct: 459 IQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFM 518

Query: 578 QMVEKG 583
           +M E  
Sbjct: 519 EMDENA 524



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 229/473 (48%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P NVYT +++I+  C  +R+  A   L +       P   S   ++   C  G    A  
Sbjct: 106 PHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALH 165

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  M+  G  PD   Y  LI+GLC  G    A+     M +   +PD + Y  L     
Sbjct: 166 LFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLC 225

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              Q + A+ +  +++ KG  P+IVT   L+   C +G  +    L   M+      N I
Sbjct: 226 KDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAI 285

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           + + ++ ++CK G + +A  ++  M   G++PD+VTY+ LI G C + ++ +A+++++ M
Sbjct: 286 SLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMM 345

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K  +PN F++  ++ G C+ E + +A   F+ +     I + V YN +I G   +G +
Sbjct: 346 VHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRL 405

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A+ L+R+++     P +VT+  L+   CKN  +  A  LL  I+   L+P    YT  
Sbjct: 406 QDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIV 465

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C  G ++    L   + +K + P   TY ++  GLCK+  L EA +L  +M     
Sbjct: 466 IDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENAC 525

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           + D  TYNTI + F +  +  +A QLL +M         +T  +L+  L  +G
Sbjct: 526 SADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDG 578



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 245/501 (48%), Gaps = 4/501 (0%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           +V +LN +++ +C L     A  +   +LK G  PD  S+  LI GLC+ G + EAL   
Sbjct: 108 NVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLF 167

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           + M   G +PD + Y+ L  G       S A ++++ +      PD+V Y  LI   C+ 
Sbjct: 168 DKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKD 227

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
               +   L   M+++G   N++  + L+ ++C  G       LL EM    + P+ ++ 
Sbjct: 228 RQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISL 287

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + ++  LCK+  V +A  + + M    + P+   + A++ G C +  + EA   FD ++ 
Sbjct: 288 TTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVH 347

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
             C  +V  YN +I+GY K+  + +A+ L+ ++  +++ P+ VT+N+LI+G C  G++ D
Sbjct: 348 KGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQD 407

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  L   +   G  P  VTY   ++  C+  ++ + +ALL+ +E   + P    YT+VI 
Sbjct: 408 AIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVID 467

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           G+C+  +L++A  L  ++   G+ P+  TYN +    CK   L +A +L  +M  +    
Sbjct: 468 GMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSA 527

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              TYN +  G   N +   A  LL  +     S   V+ TT++    ++  + ++    
Sbjct: 528 DGCTYNTITQGFLRNNETSRAIQLLEEMLARGFS-CDVSTTTLLVGMLSDDGLDQSEAHK 586

Query: 577 CQMVEKGFEISIRDYTKSFFC 597
            + +     I ++D   + FC
Sbjct: 587 LEDMFPHLRIQVKD---TVFC 604



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 206/445 (46%)

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
            ++++AL   N M      P  + ++ +      + + S    + +K+   G   ++ T 
Sbjct: 53  NTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTL 112

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            VLI  +C +  V     +   +L  G + +  +++ L+  +C  G+I EAL L  +M  
Sbjct: 113 NVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIW 172

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G +PD+V Y+ LI GLCK      AI+L   M      P+   +G ++  LC+    T+
Sbjct: 173 EGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQ 232

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A   F  +I      ++V  N ++     LG       L  ++++ +I P+ ++  +++ 
Sbjct: 233 AFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVD 292

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             CK G VA A  ++D +   G+EP  VTYT  ++ +C    +   + +   M  K   P
Sbjct: 293 ALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAP 352

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              +Y  +I G CK  ++ +A+ L E+M    + P+ +TYNT+I   C    L+ A  L 
Sbjct: 353 NVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALF 412

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +M      P   TY IL+D LC N  L  A  LL +++  N+      YT +I   C  
Sbjct: 413 REMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRA 472

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDY 591
           G++  A   F  +  KG + ++  Y
Sbjct: 473 GELEDARDLFSNLSSKGLKPNVWTY 497



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 240/522 (45%), Gaps = 17/522 (3%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSI 68
           V+ A  V+AK+ +L  +    ++ +L+  L           L+D +       +V   + 
Sbjct: 125 VNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYAT 184

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+GLC+      AI  L+        P VV    ++   CK      A  LF  M+  G
Sbjct: 185 LINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKG 244

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + P+  + N L++ LC  G  +      N+M    + P+AI+ + +         ++ A 
Sbjct: 245 ISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAH 304

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            V+  +   G +PD+VTYT LI G+C    ++E +K+ ++M+ +G   NV +Y+ L++  
Sbjct: 305 DVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGY 364

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK  R+D+A+ L  EM    L P+ VTY+ LI GLC   ++  AI L+ EM +    P+ 
Sbjct: 365 CKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDL 424

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  +L  LC+   + +A     ++  SN   D+ +Y I+IDG  + G + +A  L+  
Sbjct: 425 VTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSN 484

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           L  K + P++ T+N + +G CK G + +A +L   +  +       TY T    +     
Sbjct: 485 LSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNE 544

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
             R + LL+EM  +       T T+++  L      Q     LEDM+        +    
Sbjct: 545 TSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMF------PHLRIQV 598

Query: 489 IIRSFCKCKDLRKAFQLLNQM--WLHNLE------PTSATYN 522
               FCK  D+    ++++ +  WL  LE       T +TY+
Sbjct: 599 KDTVFCKEDDINALGKVISDLNDWLEELEEDMIFLSTPSTYS 640



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 205/450 (45%), Gaps = 15/450 (3%)

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           Y     +++ L     ML      +++ ++ +L+S+ K  R    L L  +M++ G+  +
Sbjct: 49  YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHN 108

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           + T ++LI   C  ++V+ A  +  ++      P++ +   ++ GLC +  I EA   FD
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +I      DVV+Y  +I+G  K G+   A++L R + +    P +V + +LI+  CK+ 
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR 228

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           +   A  L   +   G+ P+ VT  + + A C  G  + +  LL EM    I P  ++ T
Sbjct: 229 QQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLT 288

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            V+  LCK+  + +A  +++ M+  GV PD +TY  +I   C   ++ +A ++ + M   
Sbjct: 289 TVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHK 348

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
              P   +YN LI+G C    +  A  L   +    +    V Y T+I   C  G +  A
Sbjct: 349 GCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDA 408

Query: 573 MTFFCQMVEKG-------FEISIR--------DYTKSFFCMMLSNGFPPDQEICEVMLIA 617
           +  F +MV  G       + I +         D   +    +  +   PD +I  +++  
Sbjct: 409 IALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDG 468

Query: 618 FHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             + G+L    +L + +   GL P+ +  N
Sbjct: 469 MCRAGELEDARDLFSNLSSKGLKPNVWTYN 498



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 35/284 (12%)

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           +L+N     Y+    + +A+  + +++     PSIV F  ++    K  + +    L   
Sbjct: 40  LLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRK 99

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +   G+  +  T    +N++C    +    ++L ++      P   ++T +IKGLC + +
Sbjct: 100 MDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQ 159

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK---------------------------- 495
           + EA+ L + M   G  PD + Y T+I   CK                            
Sbjct: 160 IGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT 219

Query: 496 -----CKDLR--KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
                CKD +  +AF L ++M    + P   T N L+  LC  G+ K+ + LL  + +  
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           I    ++ TT++ A C EG V +A      M + G E  +  YT
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYT 323



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 96/245 (39%), Gaps = 15/245 (6%)

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
           ++ +  F + Y     +   L+    M      P+ V +  ++  + K  +    + L  
Sbjct: 39  SLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSR 98

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            M   G+  +  T N +I SFC    +  AF +L ++     +P +A++  LI GLC+ G
Sbjct: 99  KMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEG 158

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI---- 588
            +  A  L   +         V Y T+I   C  G    A+     M +   +  +    
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYG 218

Query: 589 ---------RDYTKSF--FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
                    R  T++F  F  M++ G  P+   C  ++ A    G+   V  L   M+ S
Sbjct: 219 TLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS 278

Query: 638 GLLPD 642
            ++P+
Sbjct: 279 KIMPN 283


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 246/486 (50%), Gaps = 1/486 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P   S N ++ ++ KLG  +  K  F  M+  G  P  F+YNI+I  +   G +E A   
Sbjct: 96  PKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGL 155

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M   G+ PD +TY+ +  G+  + ++       +++     +PD++TY  LI  +C+
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCK 215

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G + +GL+    M   G K NV++YS L+ + CK   + +A+    +M  VG  P+  T
Sbjct: 216 SGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFT 275

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ L+   CK   +  A +L NEM    +  N   + A++ GLC+ E + EA   F  ++
Sbjct: 276 YTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMV 335

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            +  I ++  YN +I G+VK  N+  A++L  +L  + I P ++ + + I+G C   K+ 
Sbjct: 336 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIE 395

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A+ +++ ++ +G++ + + YTT M+AY + GN    L LL+EM+      T VT+ V+I
Sbjct: 396 AAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLI 455

Query: 456 KGLCKQWKLQEAVQLLEDMYV-IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
            GLCK   + +A+     M    G+ P+   Y  +I   CK   ++ A  L  QM    L
Sbjct: 456 DGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGL 515

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P    Y  L+DG    G++  A  L   + E  + L  +AYT+++        + KA +
Sbjct: 516 VPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARS 575

Query: 575 FFCQMV 580
           F  +M+
Sbjct: 576 FLEEMI 581



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 254/504 (50%), Gaps = 4/504 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTN 66
           GM+ +A    +KMK   +    ++ N LL+    L  TD +   + D+  + +   V+T 
Sbjct: 77  GMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTY 136

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+ID + ++  ++ A    +E   +   P  V+ N+++  Y K+G  +     F  M  
Sbjct: 137 NIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS 196

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
               PD  +YN LI+  C +G + + LEF  +M + G++P+ ++YS L   F     +  
Sbjct: 197 MSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQ 256

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A K    +   G  P+  TYT L+   C+IGN+ +  +L   ML  G + NV+ Y+ L+ 
Sbjct: 257 AIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALID 316

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C + R+ EA  L  +M   G+ P+L +Y+ LI G  K   + +A++L NE+  + I P
Sbjct: 317 GLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQP 376

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +G  + GLC  E I  A++  + +  +    + ++Y  ++D Y K GN  E + L 
Sbjct: 377 DLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLL 436

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH-GLEPSAVTYTTFMNAYCE 425
            ++ E     ++VTF  LI G CKN  V+ A      +    GL+P+A  YT  ++  C+
Sbjct: 437 EEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCK 496

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           E  ++    L ++M  + + P    YT ++ G  KQ  + EA+ L + M  IG+  D + 
Sbjct: 497 ENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLA 556

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQM 509
           Y +++  F +C  L+KA   L +M
Sbjct: 557 YTSLVWGFSQCNQLQKARSFLEEM 580



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 211/434 (48%), Gaps = 4/434 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRN 62
           Y + G + D V+   +MK +  +  + TYNSL+     +  +    + Y ++K S    N
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPN 237

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V + S ++D  C++  +Q AI F  +       P+  +  +++   CK+G    A  L  
Sbjct: 238 VVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLAN 297

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML+ G+  +  +Y  LI GLC A  M+EA +    M   GV P+  +Y+ L  GF    
Sbjct: 298 EMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAK 357

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A +++ +L  +G  PD++ Y   I G C +  +E    +   M   G K N + Y+
Sbjct: 358 NMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYT 417

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+ +  KSG   E L LL EM+ +  +  +VT+ +LI GLCK   V KAI  +  M + 
Sbjct: 418 TLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSND 477

Query: 303 -RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             + PN+  + A++ GLC++  +  A   F+ +     + D   Y  ++DG +K GN+ E
Sbjct: 478 FGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLE 537

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ L  ++ E  +   ++ + SL++GF +  ++  AR  L+ +    + P  V     + 
Sbjct: 538 ALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLK 597

Query: 422 AYCEEGNIQRLLAL 435
            + E G I   + L
Sbjct: 598 KHYELGCIDEAVGL 611



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 68/179 (37%), Gaps = 20/179 (11%)

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           L+EA Q    M    V P   + N ++  F K        +    M     +PT  TYNI
Sbjct: 79  LEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNI 138

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +ID +   GD++ A  L   ++   +    V Y ++I  +   G +   + FF +M    
Sbjct: 139 MIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEM---- 194

Query: 584 FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                    KS  C        PD      ++  F + G L    E    M +SGL P+
Sbjct: 195 ---------KSMSC-------EPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPN 237


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 154/522 (29%), Positives = 252/522 (48%), Gaps = 7/522 (1%)

Query: 23  KELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRL 79
           +   +  S ++YN++L  L   D   D   LY  +     P   +T  +    LC+  R 
Sbjct: 137 RRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRA 196

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
           +DA+  L+  A     P  V    ++      G    A  L   ML  G   D  ++N +
Sbjct: 197 RDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDV 256

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           + GLC  G + EA    + M  HG  P  +TY  L +G     Q   A+ ++ ++     
Sbjct: 257 VLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRV----P 312

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
           + ++V    +I G    G +    +L E+M S+G   +V  Y++L+  +CK GR   A+ 
Sbjct: 313 EVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVR 372

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           +L EME  G  P++VTYS L+   C+      A  + ++M +K  S NS  +  I+  L 
Sbjct: 373 MLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALG 432

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           +   + EA      +    C  D+  YN +I        + EA  ++  L+E+ +  + +
Sbjct: 433 KDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGI 492

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T+N+LI+    +G+  +  RL + + LHG     V+Y   + A C+EGN+ R + LL+EM
Sbjct: 493 TYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEM 552

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
            TK I P + +Y ++I  LCK  K+++A++L ++M   G+TPD +TYNT+I   CK    
Sbjct: 553 MTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWT 612

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
             A  LL ++   N+ P   TYNILI   C    L +A  LL
Sbjct: 613 HAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLL 654



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/514 (28%), Positives = 237/514 (46%), Gaps = 33/514 (6%)

Query: 84  LFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           L L +   + F   PS  S NA++S   +      A  L+  ML+  + P  F++ +   
Sbjct: 129 LHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAAR 188

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
            LC  G   +AL     M RHG  PDA+ Y  +         ++ A  ++ ++L+ G   
Sbjct: 189 ALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAA 248

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D+ T+  ++ G C +G+V E  +L + M+  G   +V+ Y  LL  +C++ + DEA  +L
Sbjct: 249 DVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAML 308

Query: 262 ------------------------------YEM-EAVGLKPDLVTYSILIRGLCKQDKVH 290
                                         YEM  + G  PD+ TY+IL+ GLCK  +  
Sbjct: 309 GRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCG 368

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A+++ +EM  K  +PN   +  +L   C   M  +AR   D +       +   YN +I
Sbjct: 369 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGII 428

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
               K G + EA++L +++  +   P I T+N++IY  C N ++ +A  +   +   G+ 
Sbjct: 429 YALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVV 488

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
            + +TY T ++A    G  Q  L L  EM         V+Y  +IK LCK+  +  ++ L
Sbjct: 489 ANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMML 548

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           LE+M   G+ P+  +YN +I   CK   +R A +L  +M    L P   TYN LI+GLC 
Sbjct: 549 LEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCK 608

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
            G    A  LL  L   N+    V Y  +I  HC
Sbjct: 609 VGWTHAALNLLEKLPNENVHPDIVTYNILISWHC 642



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 209/455 (45%), Gaps = 42/455 (9%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           G V +A  ++ +M  +     + T+N +   L  L H      L D + +     +V T 
Sbjct: 229 GGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTY 288

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
             ++ GLC+  +  +A   L    G+    +VV LN ++      G    A  L+ +M  
Sbjct: 289 GFLLRGLCRTRQADEAYAML----GRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGS 344

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL------------ 174
            G  PD  +YNIL+HGLC  G    A+   ++M   G  P+ +TYS L            
Sbjct: 345 KGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDD 404

Query: 175 ---------AKGFHLLSQ--------------ISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
                    AKGF + SQ              +  A +++Q++  +G  PDI TY  +I 
Sbjct: 405 ARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIY 464

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
             C    ++E   +   +L +G   N I Y+ L+ ++  SGR  E L L  EM   G   
Sbjct: 465 HLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPL 524

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D+V+Y+ LI+ LCK+  V +++ L  EM +K I PN+F++  ++  LC+   + +A    
Sbjct: 525 DVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELS 584

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             ++      D+V YN +I+G  K+G    A+ L  +L  + + P IVT+N LI   CK 
Sbjct: 585 KEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKV 644

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             + DA  LLD     G+ P+  T+   +  +  +
Sbjct: 645 RLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVRQ 679



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 157/312 (50%), Gaps = 5/312 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNV 63
           + G    AV ++ +M+E     +I TY++LL++      MWD    + D +       N 
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNG-MWDDARAMLDQMSAKGFSMNS 421

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
              + +I  L +  +L +A+  +QE   +   P + + N I+   C     + A+ +F  
Sbjct: 422 QGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGN 481

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +L+ G+  +  +YN LIH L  +G  +E L   N+M  HG   D ++Y+ L K       
Sbjct: 482 LLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGN 541

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  +  ++++++ KG  P+  +Y +LI   C+ G V + L+L + ML+QG   +++ Y+ 
Sbjct: 542 VDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNT 601

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++ +CK G    AL LL ++    + PD+VTY+ILI   CK   +  A  L ++  S  
Sbjct: 602 LINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGG 661

Query: 304 ISPNSFAHGAIL 315
           I PN    G ++
Sbjct: 662 IVPNERTWGMMV 673



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 132/320 (41%), Gaps = 48/320 (15%)

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN ++    +     +A+ LYR+++  R+ P+  TF       C+ G+  DA  LL  + 
Sbjct: 148 YNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGMA 207

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
            HG  P AV Y T ++A   +G +     LL EM          T+  V+ GLC    ++
Sbjct: 208 RHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVR 267

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ----------------- 508
           EA +L++ M + G TP  +TY  ++R  C+ +   +A+ +L +                 
Sbjct: 268 EAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCL 327

Query: 509 --------------MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
                         M      P   TYNIL+ GLC  G   +A  +L  ++E   +   V
Sbjct: 328 AEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIV 387

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM---------------M 599
            Y+T++ + C  G    A     QM  KGF ++ + Y    + +               M
Sbjct: 388 TYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEM 447

Query: 600 LSNGFPPDQEICEVMLIAFH 619
            S G  PD  IC    I +H
Sbjct: 448 KSQGCKPD--ICTYNTIIYH 465



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 126/250 (50%), Gaps = 3/250 (1%)

Query: 4   FVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETP 60
           +   + G + +A+ ++ +MK    K  I TYN+++Y+L + D M +   ++ ++      
Sbjct: 429 YALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVV 488

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N  T + +I  L    R Q+ +    E         VVS N ++   CK G  + +  L
Sbjct: 489 ANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMML 548

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M+  G+ P+ FSYN+LI+ LC AG + +ALE + +M   G+ PD +TY+ L  G   
Sbjct: 549 LEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCK 608

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +     A  +++KL  +   PDIVTY +LI  +C++  +++   L +  +S G   N   
Sbjct: 609 VGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERT 668

Query: 241 YSVLLSSMCK 250
           + +++ +  +
Sbjct: 669 WGMMVQNFVR 678



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 123/284 (43%), Gaps = 25/284 (8%)

Query: 360 GEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           G A+ L  Q+  +  ++PS  ++N+++    +    ADA  L   +    + P+  T+  
Sbjct: 126 GRALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 185

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
              A C  G  +  LALL+ M      P  V Y  VI  L  Q  + EA  LL++M ++G
Sbjct: 186 AARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMG 245

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
              D  T+N ++   C    +R+A +L+++M +H   P+  TY  L+ GLC       A 
Sbjct: 246 CAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY 305

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            +L  + E N+    V   T+I+   AEG + +A                       + M
Sbjct: 306 AMLGRVPEVNV----VMLNTVIRGCLAEGKLARA--------------------TELYEM 341

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           M S G PPD     +++    + G  GS   +   M + G  P+
Sbjct: 342 MGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPN 385


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 149/563 (26%), Positives = 274/563 (48%), Gaps = 25/563 (4%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL+ D+  S    +V     ++  + +  RL   I   ++   +    +  S   +M  +
Sbjct: 64  DLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCF 123

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           C       A   F  + K G HP   +++ L+HGLC+   + EAL+  + M     +P+ 
Sbjct: 124 CSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNV 179

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL-RE 227
           +T++ L  G     ++  A  ++ ++L  G  P+ +TY  ++ G C++G+    L L R+
Sbjct: 180 VTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRK 239

Query: 228 VMLSQGFKLNVIAYSV-----LLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIR 281
           +      K NV+ + +     +++  C SGR  EA  LL EM E   + PD+VTY+ LI 
Sbjct: 240 MEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALIN 299

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
              K+ K  +A +LY+EM  + I P++  + +++ G C++  +  A   F  +    C  
Sbjct: 300 AFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 359

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D++ +N +I GY +   + + ++L  ++ E  +  + +T+ +LI+GFC+ G +  A+ LL
Sbjct: 360 DIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLL 419

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET-----------KAIGPTHVT 450
             +   G+ P+ VT  T ++  C+ G ++  L + + M+              + P   T
Sbjct: 420 QEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQT 479

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y ++I GL  + K  EA +L E+M   G+ PD ITYN++I   CK   L +A Q+ + M 
Sbjct: 480 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMG 539

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
             +  P   T+  LI+G C  G + +   L   +    I    + Y T+I      G+++
Sbjct: 540 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNIN 599

Query: 571 KAMTFFCQMVEKGF---EISIRD 590
            A+  F +M+  G     I+IR+
Sbjct: 600 GALDIFQEMMASGVYPDTITIRN 622



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 259/515 (50%), Gaps = 19/515 (3%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           A+    K+ +L    ++ T+++LL+ L   D + +  D       P NV T + +++GLC
Sbjct: 132 ALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKP-NVVTFTTLMNGLC 190

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LHPDA 133
           ++ R+ +A+  L         P+ ++   I+   CK+G    A  L   M +   + P+ 
Sbjct: 191 REGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNV 250

Query: 134 FSYNI-----LIHGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLLSQISGA 187
             + +     +I+G C +G   EA +   +M  R  + PD +TY+ L   F    +   A
Sbjct: 251 VIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEA 310

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++  ++L +G  P  +TY+ +I G+C+   ++    +  +M ++G   ++I ++ L++ 
Sbjct: 311 EELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAG 370

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            C++ R+D+ + LL+EM   GL  + +TY+ LI G C+   ++ A  L  EM S  + PN
Sbjct: 371 YCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPN 430

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMS----------NCIQ-DVVLYNIMIDGYVKL 356
                 +L GLC+   + +A   F ++  S          N ++ DV  YNI+I G +  
Sbjct: 431 VVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINE 490

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   EA +LY ++  + I P  +T+NS+I+G CK  ++ +A ++ D++      P+ VT+
Sbjct: 491 GKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 550

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           TT +N YC+ G +   L L  EM  + I    +TY  +I G  K   +  A+ + ++M  
Sbjct: 551 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMA 610

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            GV PD IT   ++      ++L++A  +L  + +
Sbjct: 611 SGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQM 645



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 242/501 (48%), Gaps = 22/501 (4%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T S ++ GLC + R+ +A+    +       P+VV+   +M+  C+ G    A  L  
Sbjct: 148 VVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLD 203

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR-HGVEPDAITYSI-----LAK 176
            ML+ GL P+  +Y  ++ G+C  G    AL     M     ++P+ + + +     +  
Sbjct: 204 RMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMIN 263

Query: 177 GFHLLSQISGAWKVIQKLL-IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
           GF    + S A +++Q++L  K   PD+VTY  LI  + + G   E  +L + ML +G  
Sbjct: 264 GFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 323

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            + I YS ++   CK  R+D A  + Y M   G  PD++T++ LI G C+  +V   I+L
Sbjct: 324 PSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKL 383

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
            +EM    +  N+  +  ++ G C+   +  A+     ++ S    +VV  N ++DG   
Sbjct: 384 LHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCD 443

Query: 356 LGNIGEAVQLYRQLIEKR-----------ISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            G + +A+++++ + + +           + P + T+N LI G    GK  +A  L + +
Sbjct: 444 NGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 503

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G+ P  +TY + ++  C++  +     +   M +K+  P  VT+T +I G CK  ++
Sbjct: 504 PHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 563

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            + ++L  +M   G+  + ITY T+I  F K  ++  A  +  +M    + P + T   +
Sbjct: 564 DDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNM 623

Query: 525 IDGLCVNGDLKNADCLLVSLQ 545
           + GL    +LK A  +L  LQ
Sbjct: 624 LTGLWSKEELKRAVAMLEDLQ 644



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/575 (26%), Positives = 254/575 (44%), Gaps = 42/575 (7%)

Query: 110 KLGFAEV-----AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           + GF E+     A  LF  M++    P    +  L+  +   G ++  +     M    V
Sbjct: 50  RSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRV 109

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
             +A +++IL K F   S++  A     K+   G  P +VT++ L+ G C    + E L 
Sbjct: 110 PCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALD 169

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L      Q  K NV+ ++ L++ +C+ GR+ EA+ LL  M   GL+P+ +TY  ++ G+C
Sbjct: 170 L----FHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMC 225

Query: 285 KQDKVHKAIQLYNEMCS-KRISPNSF-----AHGAILLGLCEKEMITEARMYFDSLIMSN 338
           K      A+ L  +M     I PN           ++ G C     +EA+     ++   
Sbjct: 226 KMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERK 285

Query: 339 CIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
            I  DVV YN +I+ +VK G   EA +LY +++ + I PS +T++S+I GFCK  ++  A
Sbjct: 286 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAA 345

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             +   +   G  P  +T+ T +  YC    +   + LL EM    +    +TYT +I G
Sbjct: 346 EHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 405

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW------- 510
            C+   L  A  LL++M   GV P+ +T NT++   C    L+ A ++   M        
Sbjct: 406 FCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDID 465

Query: 511 ----LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
                + +EP   TYNILI GL   G    A+ L   +    I    + Y ++I   C +
Sbjct: 466 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQ 525

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEIC 611
             + +A   F  M  K F  ++  +T                  FC M   G   +    
Sbjct: 526 SRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITY 585

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
             ++  F + G++    ++   M+ SG+ PD   I
Sbjct: 586 ITLIHGFRKVGNINGALDIFQEMMASGVYPDTITI 620



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 238/507 (46%), Gaps = 23/507 (4%)

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           S+  AL   +  G  G   +++    L  GFH +  +  A  +   ++     P ++ + 
Sbjct: 26  SIRHALAKKSRDGESGFGGESLK---LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFC 82

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            L+    ++G ++  + L   M  +    N  ++++L+   C   ++  AL    ++  +
Sbjct: 83  KLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKL 142

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  P +VT+S L+ GLC +D++ +A+ L+++MC     PN      ++ GLC +  + EA
Sbjct: 143 GFHPTVVTFSTLLHGLCVEDRISEALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEA 198

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE-KRISPSIVTF----- 381
               D ++      + + Y  ++DG  K+G+   A+ L R++ E   I P++V +     
Sbjct: 199 VALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERR 258

Query: 382 NSLIYGFCKNGKVADARRLL-DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
             +I GFC +G+ ++A++LL + ++   + P  VTY   +NA+ +EG       L  EM 
Sbjct: 259 TCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEML 318

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            + I P+ +TY+ +I G CKQ +L  A  +   M   G +PD IT+NT+I  +C+ K + 
Sbjct: 319 PRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVD 378

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
              +LL++M    L   + TY  LI G C  GDL  A  LL  +    +    V   T++
Sbjct: 379 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLL 438

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
              C  G +  A+  F  M +   +I   D +  F      NG  PD +   +++     
Sbjct: 439 DGLCDNGKLKDALEMFKAMQKSKMDI---DASHPF------NGVEPDVQTYNILISGLIN 489

Query: 621 GGDLGSVFELAAVMIKSGLLPDKFLIN 647
            G      EL   M   G++PD    N
Sbjct: 490 EGKFLEAEELYEEMPHRGIVPDTITYN 516



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 232/460 (50%), Gaps = 33/460 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDI----------KVS 57
           R G V +AV ++ +M E  L+ +  TY +++      D M  + D +          +VS
Sbjct: 191 REGRVVEAVALLDRMLEDGLQPNQITYGTIV------DGMCKMGDTVSALNLLRKMEEVS 244

Query: 58  ETPRNVY-----TNSIVIDGLCQQSRLQDAILFLQET-AGKEFGPSVVSLNAIMSRYCKL 111
               NV        + +I+G C   R  +A   LQE    K+  P VV+ NA+++ + K 
Sbjct: 245 HIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKE 304

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G    A+ L+  ML  G+ P   +Y+ +I G C    ++ A      M   G  PD IT+
Sbjct: 305 GKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITF 364

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + L  G+    ++    K++ ++   G   + +TYT LI G+CQ+G++     L + M+S
Sbjct: 365 NTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVS 424

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV-----------GLKPDLVTYSILI 280
            G   NV+  + LL  +C +G++ +AL +   M+             G++PD+ TY+ILI
Sbjct: 425 SGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILI 484

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
            GL  + K  +A +LY EM  + I P++  + +++ GLC++  + EA   FDS+   +  
Sbjct: 485 SGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFS 544

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            +VV +  +I+GY K G + + ++L+ ++  + I  + +T+ +LI+GF K G +  A  +
Sbjct: 545 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDI 604

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
              +   G+ P  +T    +     +  ++R +A+L++++
Sbjct: 605 FQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 146/287 (50%), Gaps = 11/287 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T + +I G C+  R+ D I  L E        + ++   ++  +C++G    A+ L 
Sbjct: 360 DIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLL 419

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR-----------HGVEPDAIT 170
             M+  G+ P+  + N L+ GLC  G +++ALE    M +           +GVEPD  T
Sbjct: 420 QEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQT 479

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y+IL  G     +   A ++ +++  +G  PD +TY  +I G C+   ++E  ++ + M 
Sbjct: 480 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMG 539

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           S+ F  NV+ ++ L++  CK+GR+D+ L L  EM   G+  + +TY  LI G  K   ++
Sbjct: 540 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNIN 599

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            A+ ++ EM +  + P++     +L GL  KE +  A    + L MS
Sbjct: 600 GALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMS 646



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 141/297 (47%), Gaps = 27/297 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           Y R   V D + ++ +M E  L  +  TY +L++        +   DL  ++  S    N
Sbjct: 371 YCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPN 430

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + ++DGLC   +L+DA+        K    S + ++A                   
Sbjct: 431 VVTCNTLLDGLCDNGKLKDALEMF-----KAMQKSKMDIDASHPF--------------- 470

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
                G+ PD  +YNILI GL   G   EA E   +M   G+ PD ITY+ +  G    S
Sbjct: 471 ----NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQS 526

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A ++   +  K   P++VT+T LI GYC+ G V++GL+L   M  +G   N I Y 
Sbjct: 527 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 586

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            L+    K G I+ AL +  EM A G+ PD +T   ++ GL  ++++ +A+ +  ++
Sbjct: 587 TLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 226/418 (54%)

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           A    +E        S+V+ N +++  C+ G  + AK     M  YG+ P+  +YN +I+
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
           G C+ G  E A +    M    ++PD  TY+          +I  A  V+ KLL  G  P
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP 320

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           + VTY  LI G C  G++++    R+ M+++G   +V  Y++L+ ++    RI+EA  ++
Sbjct: 321 NAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMI 380

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            EM   G++PD+VTY+I I G C+     KA+ L++EM  K I P    + +++    ++
Sbjct: 381 KEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKR 440

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             ++EA   F   I    + D++++N +IDG+   GNI  A QL +++   ++ P  VTF
Sbjct: 441 NRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTF 500

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N+L+ G+C+  KV +A++LLD +K  G++P  ++Y T ++ Y + G+++  L +  EM +
Sbjct: 501 NTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLS 560

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
               PT +TY  +I+G  K  +   A +LL +M   G+TPD  TY  +I +     DL
Sbjct: 561 LGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDL 618



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 265/536 (49%), Gaps = 38/536 (7%)

Query: 37  LLYNLRHTDIMWDLYDDIKVSETPRNVYTN---SIVIDGLCQQSRLQDAILFLQETAGKE 93
           +L  + HT     +++++ ++    NV T     +++   CQ  +  +A+  L      E
Sbjct: 118 ILQPILHTTTPTVIFNELSLARNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENE 177

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
             P   + N+++S   KL   ++A  ++  M+K  +     ++NI+I+ LC  G  ++A 
Sbjct: 178 IIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAK 237

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           +F   M  +GV+                                   P++VTY  +I GY
Sbjct: 238 DFIGHMEVYGVK-----------------------------------PNVVTYNTVINGY 262

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C  G  E   K+ + M  +  K +   Y+  +S +CK  RI+EA G+L ++   GL P+ 
Sbjct: 263 CLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNA 322

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VTY+ LI G C +  + KA    +EM ++ I  + F +  ++  L  ++ I EA      
Sbjct: 323 VTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKE 382

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +       DVV YNI I+GY + GN  +A+ L+ +++EK I P++ T+ SLI  F K  +
Sbjct: 383 MREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNR 442

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           +++A          G+ P  + +   ++ +C  GNI R   LL+EM+   + P  VT+  
Sbjct: 443 MSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNT 502

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +++G C++ K++EA +LL++M   G+ PD I+YNT+I  + K  D++ A ++ ++M    
Sbjct: 503 LMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLG 562

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
            +PT  TYN LI G    G+  +A+ LL  +Q   I+     Y  +I+A     D+
Sbjct: 563 FDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDL 618



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 206/413 (49%), Gaps = 15/413 (3%)

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           E M+    K +++ ++++++ +C+ G+  +A   +  ME  G+KP++VTY+ +I G C +
Sbjct: 206 EEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR 265

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            K   A +++  M  K + P+ + + + +  LC++  I EA      L+ S  + + V Y
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N +IDG    G++ +A     +++ + I  S+ T+N LI+      ++ +A  ++  ++ 
Sbjct: 326 NALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMRE 385

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+EP  VTY   +N YC  GN ++ L+L  EM  K I PT  TYT +I    K+ ++ E
Sbjct: 386 KGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSE 445

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A +  +     G+ PD I +N +I   C   ++ +AFQLL +M    + P   T+N L+ 
Sbjct: 446 AEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQ 505

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           G C    ++ A  LL  ++E  I    ++Y T+I  +   GD+  A+  F +M+  GF+ 
Sbjct: 506 GYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDP 565

Query: 587 SI---------------RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
           ++                D+ +     M S G  PD      ++ A     DL
Sbjct: 566 TLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDL 618



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 200/445 (44%), Gaps = 58/445 (13%)

Query: 235 KLNV---IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +LNV   + + +LLS+ C+  + DEAL  L  M+   + P   T + L+  L K +K+  
Sbjct: 141 RLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKM 200

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A  +Y EM    I  +      ++  LC +    +A+ +   + +     +VV YN +I+
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           GY   G    A ++++ + +K + P   T+NS I   CK  ++ +A  +L  +   GL P
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP 320

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           +AVTY   ++  C +G++ +  A   EM  + I  +  TY ++I  L  + +++EA  ++
Sbjct: 321 NAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMI 380

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY---------- 521
           ++M   GV PD +TYN  I  +C+C + +KA  L ++M   N+ PT  TY          
Sbjct: 381 KEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKR 440

Query: 522 -------------------------NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
                                    N LIDG CVNG++  A  LL  +    +   +V +
Sbjct: 441 NRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTF 500

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
            T+++ +C E  V +A     +M E+G                      PD      ++ 
Sbjct: 501 NTLMQGYCRERKVEEAKKLLDEMKERGI--------------------KPDHISYNTLIS 540

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLP 641
            + + GD+    E+   M+  G  P
Sbjct: 541 GYSKRGDMKDALEVFDEMLSLGFDP 565



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 146/298 (48%), Gaps = 15/298 (5%)

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +Y ++++  I  SIVTFN +I   C+ GK   A+  +  ++++G++P+ VTY T +N YC
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             G  +    + + M+ K + P   TY   I  LCK+ +++EA  +L  +   G+ P+ +
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAV 323

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TYN +I   C   DL KAF   ++M    +  +  TYN+LI  L +   ++ A+ ++  +
Sbjct: 324 TYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM 383

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------------ 592
           +E  +    V Y   I  +C  G+  KA++ F +MVEK    ++  YT            
Sbjct: 384 REKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRM 443

Query: 593 ---KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              +  F   +  G  PD  +   ++      G++   F+L   M  + ++PD+   N
Sbjct: 444 SEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFN 501


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 153/496 (30%), Positives = 251/496 (50%), Gaps = 53/496 (10%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+ S N ++S   K+        L+  M   GL  D  + NIL++ LC    + E    
Sbjct: 67  PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              + R G  P+ +TY+ L KG  +  +IS A ++  ++   G  PD+VTY  LI G C 
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 216 IGNVEEGLKLREVMLSQ------GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA--- 266
            GN+   LKL + ML+         K NVI Y++++  +CK GR DEA  L  EM+    
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 267 -------VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
                   GL+PD+VT+++LI  LCK+ KV +A +L   M    I P+   + +++ G C
Sbjct: 247 IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 306

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
               +  AR  F S+    C  DV+ YN++I+GY K   + EA++LY +++     P+++
Sbjct: 307 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 366

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE------------- 426
           T++SL+ G    GKV DA++L   +K HG+  ++ TY  F++  C+              
Sbjct: 367 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 426

Query: 427 ----------------------GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
                                 G ++    L +++  +   P  VTYT++I G C++ ++
Sbjct: 427 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 486

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            +A  L++ M   G TPD ITYNT++R F +   L +  QLL++M   ++ P + T +I+
Sbjct: 487 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIV 546

Query: 525 IDGLCVNGDLKNADCL 540
           +D L  + D K  +CL
Sbjct: 547 VDML--SKDEKYQECL 560



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 250/496 (50%), Gaps = 19/496 (3%)

Query: 30  SIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           S+ ++N LL  L   +H   ++ LY+ +++S    +  T +I+++ LC  +RL++     
Sbjct: 68  SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAF 127

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
                + + P++V+ N ++   C       A  LF  M K G  PD  +Y  LI GLC  
Sbjct: 128 AGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGT 187

Query: 147 GSMEEAL----EFTNDMGRHGV--EPDAITYSILAKGF----------HLLSQISGAWKV 190
           G++  AL    E  ND+ R+ +  +P+ ITY+I+  G            L  ++     +
Sbjct: 188 GNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMI 247

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
             ++L +G  PD+VT+ VLI   C+ G V E  KL  VM+  G   +++ Y+ L+   C 
Sbjct: 248 PNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCM 307

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G ++ A  L   M + G +PD+++Y++LI G  K  KV +A++LYNEM      PN   
Sbjct: 308 VGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 367

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + ++L G+     + +A+  F  +      ++   Y I +DG  K   + EA++L+ +L 
Sbjct: 368 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 427

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
                  I   N LI G CK GK+  A  L + +   G EP+ VTYT  ++ +C EG + 
Sbjct: 428 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVD 487

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           +   L+Q+ME     P  +TY  +++G  +  KL+E VQLL  M    V+PD IT + ++
Sbjct: 488 KANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 547

Query: 491 RSFCKCKDLRKAFQLL 506
               K +  ++   LL
Sbjct: 548 DMLSKDEKYQECLHLL 563



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 227/507 (44%), Gaps = 36/507 (7%)

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           AL F + M R    P   +++ L  G   +   S  + +  ++ + G   D  T  +L+ 
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
             C +  + EG      +L +G+  N++ Y+ L+  +C   RI EA  L   M+ +G  P
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSK------RISPNSFAHGAILLGLCEKEMIT 325
           D+VTY  LI+GLC    ++ A++L+ EM +          PN   +  I+ GLC+     
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232

Query: 326 EARMYFDSLIMSNCIQ----------DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
           EA+  F+ +     I           D+V +N++ID   K G + EA +L   +IE  I 
Sbjct: 233 EAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIV 292

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P +VT+NSLI GFC  G +  AR L  ++   G EP  ++Y   +N Y +   ++  + L
Sbjct: 293 PDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKL 352

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
             EM      P  +TY  ++KG+    K+ +A +L   M   G+  +  TY   +   CK
Sbjct: 353 YNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCK 412

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              L +A +L  ++   N +      N LIDGLC  G L+ A  L   L         V 
Sbjct: 413 NDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVT 472

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
           YT +I   C EG V KA      +++K                M +NG  PD      ++
Sbjct: 473 YTIMIHGFCREGQVDKANV----LIQK----------------MEANGCTPDIITYNTLM 512

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPD 642
             F++   L  V +L   M +  + PD
Sbjct: 513 RGFYESNKLEEVVQLLHRMAQKDVSPD 539



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 128/308 (41%), Gaps = 38/308 (12%)

Query: 353 YVKLGNIG--EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           + K GN+    A+  +  ++    +PS+ +FN L+ G  K    +    L + ++L GL 
Sbjct: 42  HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS 101

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
               T    +N  C    ++   A    +  +   P  VTY  +IKGLC + ++ EA +L
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM------WLHNLEPTSATYNIL 524
              M  +G TPD +TY T+I+  C   ++  A +L  +M      +  N +P   TYNI+
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221

Query: 525 IDGLCVNGDLKNADCLLVSLQ----------EHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
           +DGLC  G    A  L   ++          +  +    V +  +I   C EG V +A  
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEA-- 279

Query: 575 FFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
                             K    +M+ +G  PD      ++  F   GDL S  EL   M
Sbjct: 280 ------------------KKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSM 321

Query: 635 IKSGLLPD 642
              G  PD
Sbjct: 322 PSKGCEPD 329



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 3/208 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           YS+T  V +A+ +  +M  +  + ++ TY+SLL  +      D    L+  +K      N
Sbjct: 340 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 399

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            YT  I +DGLC+   L +A+    E     F   + +LN ++   CK G  E A  LF 
Sbjct: 400 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 459

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   G  P+  +Y I+IHG C  G +++A      M  +G  PD ITY+ L +GF+  +
Sbjct: 460 KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESN 519

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           ++    +++ ++  K   PD +T ++++
Sbjct: 520 KLEEVVQLLHRMAQKDVSPDAITCSIVV 547



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 105/265 (39%), Gaps = 33/265 (12%)

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLAL--LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           PS      F   +C+ GN+    AL     M      P+  ++  ++ GL K     +  
Sbjct: 30  PSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVF 89

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            L   M + G++ D+ T N ++   C    LR+ F     +      P   TYN LI GL
Sbjct: 90  SLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGL 149

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE--KGFEI 586
           C+   +  A  L + +Q+   +   V Y T+IK  C  G+++ A+    +M+     +EI
Sbjct: 150 CMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEI 209

Query: 587 SIR-------------------DYTKSFF----------CMMLSNGFPPDQEICEVMLIA 617
           + +                   D  K  F            ML  G  PD     V++  
Sbjct: 210 NCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDT 269

Query: 618 FHQGGDLGSVFELAAVMIKSGLLPD 642
             + G +    +L  VMI+SG++PD
Sbjct: 270 LCKEGKVIEAKKLLGVMIESGIVPD 294


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 257/502 (51%), Gaps = 16/502 (3%)

Query: 85  FLQETAGKEF---GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           FLQ ++   F    PS+ +++  +S++ ++           L +++   P    +N ++ 
Sbjct: 21  FLQNSSHSHFHSQPPSIQNVDDAVSQFNRM-----------LCMRHT--PPIIQFNKILD 67

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
                     A+  ++ +   G++PD IT +IL   F  + QI+  + V+ K+L +G  P
Sbjct: 68  SFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQP 127

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
             +T+T LI G C  G V + L   + +L+QG K + ++Y  L++ +CK G    A+ L+
Sbjct: 128 HTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLV 187

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            +++    KP++  Y+ +I  LCK   V +A  L++EM +K IS +   +  ++ G C  
Sbjct: 188 RKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIA 247

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             + EA    + +++     +V  YNI++D   K G + EA  +   +++  + P ++T+
Sbjct: 248 SKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITY 307

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           ++L+ G+    ++  A+ + + + L G+ P   +YT  +N +C+   +   L L +EM  
Sbjct: 308 STLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQ 367

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           K + P  VTY+ +I GLCK  ++     L+++M   G+  + ITYN++I   CK   L +
Sbjct: 368 KNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDR 427

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A  L N+M    + P S T+ IL+DGLC  G LK+A      L      L    Y  +I 
Sbjct: 428 AIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMIN 487

Query: 562 AHCAEGDVHKAMTFFCQMVEKG 583
            HC +G + +A+T   +M E G
Sbjct: 488 GHCKQGLLEEALTMLSKMEENG 509



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 140/531 (26%), Positives = 270/531 (50%), Gaps = 14/531 (2%)

Query: 24  ELDLKVSIQTYNSLLYNLRHT-------------DIMWDLYDDIKVSETPRNVYTNSIVI 70
              + +SI  ++S L N  H+             D +      + +  TP  +  N I +
Sbjct: 8   RFSVSLSIPNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKI-L 66

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           D   +      A+        K   P +++LN +++ +C +G       +   +LK G  
Sbjct: 67  DSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQ 126

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P   ++  LI GLC+ G + +AL F + +   G++ D ++Y  L  G   +    GA K+
Sbjct: 127 PHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKL 186

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++K+  + + P++  Y  +I   C+   V E   L   M ++G   +V+ Y+ L+   C 
Sbjct: 187 VRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCI 246

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           + ++ EA+GLL EM    + P++ TY+IL+  LCK+ KV +A  +   M    + P+   
Sbjct: 247 ASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVIT 306

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G      + +A+  F+++ +     DV  Y I+I+G+ K   + EA+ L++++ 
Sbjct: 307 YSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMH 366

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           +K + P IVT++SLI G CK+G+++    L+D ++  G+  + +TY + ++  C+ G++ 
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLD 426

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           R +AL  +M+ + I P   T+T+++ GLCK  +L++A +  +D+   G   D   YN +I
Sbjct: 427 RAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMI 486

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
              CK   L +A  +L++M  +   P + T++I+I+ L    +   A+ LL
Sbjct: 487 NGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLL 537



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/490 (29%), Positives = 243/490 (49%), Gaps = 2/490 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P ++  N I+  + K+     A  L   +   G+ PD  + NILI+  C  G +      
Sbjct: 57  PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              + + G +P  IT++ L KG  L  Q++ A     KLL +G   D V+Y  LI G C+
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           IG+    +KL   +  +  K NV  Y+ ++ ++CK   + EA GL  EM A G+  D+VT
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G C   K+ +AI L NEM  K I+PN + +  ++  LC++  + EA+    +++
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVL-AVM 295

Query: 336 MSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           +  C++ DV+ Y+ ++DGY  +  + +A  ++  +    ++P + ++  LI GFCKN  V
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMV 355

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +A  L   +    + P  VTY++ ++  C+ G I  +  L+ EM  + I    +TY  +
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSL 415

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I GLCK   L  A+ L   M   G+ P   T+  ++   CK   L+ A +    +     
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGY 475

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
                 YN++I+G C  G L+ A  +L  ++E+      V +  II A   + +  KA  
Sbjct: 476 HLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEK 535

Query: 575 FFCQMVEKGF 584
              QM+ +G 
Sbjct: 536 LLRQMICRGL 545



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 240/495 (48%), Gaps = 17/495 (3%)

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
           RH   P  I ++ +   F  +   S A  +  +L +KG  PD++T  +LI  +C +G + 
Sbjct: 54  RH--TPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQIT 111

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
            G  +   +L +G++ + I ++ L+  +C  G++++AL    ++ A G+K D V+Y  LI
Sbjct: 112 FGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLI 171

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
            G+CK      AI+L  ++  +   PN   +  I+  LC+ ++++EA   F  +      
Sbjct: 172 NGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGIS 231

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            DVV Y  +I G+     + EA+ L  +++ K I+P++ T+N L+   CK GKV +A+ +
Sbjct: 232 ADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNV 291

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L  +    ++P  +TY+T M+ Y     +++   +   M    + P   +YT++I G CK
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCK 351

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
              + EA+ L ++M+   + P  +TY+++I   CK   +   + L+++M    +     T
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVIT 411

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           YN LIDGLC NG L  A  L   +++  I      +T ++   C  G +  A   F  ++
Sbjct: 412 YNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLL 471

Query: 581 EKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
            KG+ + +  Y                 +    M  NG  P+    ++++ A  +  +  
Sbjct: 472 TKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDEND 531

Query: 626 SVFELAAVMIKSGLL 640
              +L   MI  GLL
Sbjct: 532 KAEKLLRQMICRGLL 546



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 206/415 (49%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I GLC + ++  A+ F  +   +      VS   +++  CK+G    A  L   +
Sbjct: 131 TFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKI 190

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
                 P+   YN +I  LC    + EA    ++M   G+  D +TY+ L  GF + S++
Sbjct: 191 DGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKL 250

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  ++ ++++K  +P++ TY +L+   C+ G V+E   +  VML    K +VI YS L
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTL 310

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +        + +A  +   M  +G+ PD+ +Y+ILI G CK   V +A+ L+ EM  K +
Sbjct: 311 MDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNM 370

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P    + +++ GLC+   I+      D +       +V+ YN +IDG  K G++  A+ 
Sbjct: 371 VPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIA 430

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+ ++ ++ I P   TF  L+ G CK G++ DA+     +   G       Y   +N +C
Sbjct: 431 LFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHC 490

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++G ++  L +L +ME     P  VT+ ++I  L K+ +  +A +LL  M   G+
Sbjct: 491 KQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 184/351 (52%)

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           T  NV   + +ID LC+   + +A     E   K     VV+   ++  +C     + A 
Sbjct: 195 TKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAI 254

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
           GL   M+   ++P+ ++YNIL+  LC  G ++EA      M +  V+PD ITYS L  G+
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGY 314

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
            L+ ++  A  V   + + G  PD+ +YT+LI G+C+   V+E L L + M  +     +
Sbjct: 315 FLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + YS L+  +CKSGRI     L+ EM   G+  +++TY+ LI GLCK   + +AI L+N+
Sbjct: 375 VTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNK 434

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  + I P SF    +L GLC+   + +A+  F  L+      DV  YN+MI+G+ K G 
Sbjct: 435 MKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGL 494

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           + EA+ +  ++ E    P+ VTF+ +I    K  +   A +LL  +   GL
Sbjct: 495 LEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 203/447 (45%), Gaps = 15/447 (3%)

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           I NV++ +     ML       +I ++ +L S  K      A+ L + +E  G++PDL+T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
            +ILI   C   ++     +  ++  +   P++     ++ GLC K  + +A  + D L+
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLL 156

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D V Y  +I+G  K+G+   A++L R++  +   P++  +N++I   CK   V+
Sbjct: 157 AQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVS 216

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  L   +   G+    VTYTT +  +C    ++  + LL EM  K I P   TY +++
Sbjct: 217 EAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             LCK+ K++EA  +L  M    V PD ITY+T++  +    +L+KA  + N M L  + 
Sbjct: 277 DALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVT 336

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   +Y ILI+G C N  +  A  L   + + N+    V Y+++I   C  G +      
Sbjct: 337 PDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDL 396

Query: 576 FCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQ 620
             +M ++G   ++  Y                 + F  M   G  P      ++L    +
Sbjct: 397 IDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCK 456

Query: 621 GGDLGSVFELAAVMIKSGLLPDKFLIN 647
           GG L    E    ++  G   D +  N
Sbjct: 457 GGRLKDAQEAFQDLLTKGYHLDVYKYN 483



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 190/366 (51%), Gaps = 3/366 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVY 64
           + G    A+ ++ K+     K +++ YN+++  L    ++   + L+ ++       +V 
Sbjct: 176 KIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVV 235

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I G C  S+L++AI  L E   K   P+V + N ++   CK G  + AK +  +M
Sbjct: 236 TYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVM 295

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           LK  + PD  +Y+ L+ G  +   +++A    N M   GV PD  +Y+IL  GF     +
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMV 355

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  + +++  K   P IVTY+ LI G C+ G +     L + M  +G   NVI Y+ L
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSL 415

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +CK+G +D A+ L  +M+  G++P   T++IL+ GLCK  ++  A + + ++ +K  
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGY 475

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             + + +  ++ G C++ ++ EA      +  + C+ + V ++I+I+   K     +A +
Sbjct: 476 HLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEK 535

Query: 365 LYRQLI 370
           L RQ+I
Sbjct: 536 LLRQMI 541



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 101/196 (51%), Gaps = 3/196 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           + +  MV +A+ +  +M + ++   I TY+SL+  L  +     +WDL D+++    P N
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPAN 408

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +IDGLC+   L  AI    +   +   P   +   ++   CK G  + A+  F 
Sbjct: 409 VITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQ 468

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +L  G H D + YN++I+G C  G +EEAL   + M  +G  P+A+T+ I+        
Sbjct: 469 DLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKD 528

Query: 183 QISGAWKVIQKLLIKG 198
           +   A K++++++ +G
Sbjct: 529 ENDKAEKLLRQMICRG 544



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 38/258 (14%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A  V   M  + +   + +Y  L+      +  D   +L+ ++        + T S +ID
Sbjct: 323 AQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           GLC+  R+      + E   +    +V++ N+++   CK G  + A  LF  M   G+ P
Sbjct: 383 GLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRP 442

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
            +F++ IL+ GLC  G +++A E   D+              L KG+HL           
Sbjct: 443 CSFTFTILLDGLCKGGRLKDAQEAFQDL--------------LTKGYHL----------- 477

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
                     D+  Y V+I G+C+ G +EE L +   M   G   N + + ++++++ K 
Sbjct: 478 ----------DVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKK 527

Query: 252 GRIDEALGLLYEMEAVGL 269
              D+A  LL +M   GL
Sbjct: 528 DENDKAEKLLRQMICRGL 545


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 161/651 (24%), Positives = 304/651 (46%), Gaps = 78/651 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDI--KVSETP 60
           Y R GM   +V +   +    + VS      LL +L  +   +++ D Y ++   + E P
Sbjct: 177 YCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGELCSAMREQP 236

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            +VY    V++    +  ++  + F +      FG  +++ N I+          VA   
Sbjct: 237 FSVY--EFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDY 294

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F ++++ G  P+  +++ LI   C  G++++A    + M  +GV PD I YSIL  G   
Sbjct: 295 FNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFK 354

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             ++    +++   L KG   D+V ++  +  Y +IG++   +++ + ML++G   NV++
Sbjct: 355 AGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVS 414

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
            S+L+   C++GRI EA GL  ++  +G +P ++TYS LI G CK   +     LY +M 
Sbjct: 415 CSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMI 474

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYF-------------------DSLIMSNCI- 340
            KR  P++  +  ++ GLC++ ++ +A  +F                   DS     CI 
Sbjct: 475 KKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIV 534

Query: 341 ---------------QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
                           D V Y I+I G  + G + EA+ L+ Q+++K   P ++T+ +LI
Sbjct: 535 GAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLI 594

Query: 386 YGFCKNGKVADARRLLD----------------TIKLH-------------------GLE 410
            G CK  K +    + D                 I +H                   G +
Sbjct: 595 DGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPK 654

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P   T+ T +  YC    +   + L  +M ++ + P  +T+T++I   C++ ++ +A+ +
Sbjct: 655 PDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLM 714

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA-FQLLNQMWLHNLEPTSATYNILIDGLC 529
              M   G  P+ +TY+ +I  + K + + ++  +L N+M  +N+ P   +Y+ILIDGLC
Sbjct: 715 FSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLC 774

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
             G +K A C      + ++    +AYT +I+ +C  G + +AM  +  M+
Sbjct: 775 KRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNML 825



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 218/460 (47%), Gaps = 38/460 (8%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S  +D   +   L   I   +    +   P+VVS + ++  +C+ G    A GLF  +LK
Sbjct: 381 SSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILK 440

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  P   +Y+ LI G C +G++ +      DM +   EPD I YS+L  G      +  
Sbjct: 441 LGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGD 500

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +   + + +G  P++ T   L+  +C++  +   +K+  +M     K + + Y++L+ 
Sbjct: 501 ALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIK 560

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
              + GR+DEAL L ++M     KPD++TY  LI GLCK  K    + +++ MC   ++P
Sbjct: 561 GAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAP 620

Query: 307 NSFAHGAILLGLCEKEMITEARM-YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           +  A   +L+ +  +E   EA +  F  ++      DV  +N MI  Y     + +AVQL
Sbjct: 621 D-IAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQL 679

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           + ++  +++ P+ +TF  LI  FC+ G++ DA  +   +   G EP+ VTY+  ++ Y +
Sbjct: 680 FAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFK 739

Query: 426 -EGNIQRLLALLQEMETKAIGPTHVTY--------------------------------- 451
            +  ++  L L  EM    I P  V+Y                                 
Sbjct: 740 SQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVI 799

Query: 452 --TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
             T++I+G CK  +L EA+ L ++M +  +TPD+    T+
Sbjct: 800 AYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTL 839



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 214/431 (49%), Gaps = 20/431 (4%)

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G VE GL+  + ++  GF L++I  + +L  +     I  A      +  +G KP++VT+
Sbjct: 251 GEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTF 310

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           S LI   CK+  + KA  L++ M    ++P+   +  ++ GL +   + + +      + 
Sbjct: 311 STLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALD 370

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                DVV ++  +D YVK+G++G  +Q+Y++++ + ISP++V+ + LI GFC+NG++ +
Sbjct: 371 KGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILE 430

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  L   I   G EPS +TY+  +  +C+ GN++    L ++M  K   P  + Y+V+I 
Sbjct: 431 ACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLIN 490

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLCKQ  + +A++        G++P+  T NT++ SFC+ K +  A ++   M + N++ 
Sbjct: 491 GLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKA 550

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            + TY ILI G    G +  A  L   + + +     + Y T+I                
Sbjct: 551 DTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDG-------------L 597

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           C++ +    + I D+       M  N   PD  I  V++    + G L +   L   +++
Sbjct: 598 CKLKKSSAGLCIFDF-------MCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVE 650

Query: 637 SGLLPDKFLIN 647
            G  PD F  N
Sbjct: 651 RGPKPDVFTFN 661



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 214/410 (52%), Gaps = 4/410 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           + + G + +A  +  ++ +L  + SI TY++L+     +  + D   LY+D+       +
Sbjct: 422 FCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPD 481

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
               S++I+GLC+Q  + DA+ F  +   +   P+V +LN ++  +C+L     A  ++ 
Sbjct: 482 TIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYY 541

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           LM    +  D  +Y ILI G    G ++EAL     M +   +PD ITY  L  G   L 
Sbjct: 542 LMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLK 601

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           + S    +   +      PDI  Y VLI  + + G++E  L L   ++ +G K +V  ++
Sbjct: 602 KSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFN 661

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++   C   R+D+A+ L  +M +  L+P+ +T++ILI   C++ ++  A+ ++++M  +
Sbjct: 662 TMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEE 721

Query: 303 RISPNSFAHGAILLGLCEKEMITEARM-YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
              PN   +  ++ G  + + + E+ +  ++ ++ +N   ++V Y+I+IDG  K G + E
Sbjct: 722 GPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKE 781

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           A   +R  ++K + P ++ +  LI G+CK G++ +A  L D + L+ L P
Sbjct: 782 ASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTP 831



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPR 61
           + R G + DA+ + +KM E   + ++ TY+ L++    +  M +    LY+++  +    
Sbjct: 702 FCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAP 761

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+ + SI+IDGLC++  +++A    +    K   P V++   ++  YCK+G    A  L+
Sbjct: 762 NIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLY 821

Query: 122 CLMLKYGLHPDAF 134
             ML   L PD F
Sbjct: 822 DNMLLNRLTPDRF 834


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 274/534 (51%), Gaps = 3/534 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAK 118
           +V++ +I++ GLC ++R Q+A+  L   A    G   P VVS   +++ + K G ++ A 
Sbjct: 157 DVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAY 216

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             +  ML   + PD  +Y+ +I  LC   +M++A+E    M ++GV P+ +TY+ +  G+
Sbjct: 217 STYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGY 276

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               Q   A   ++K+   G +PD+VTY  L+   C+ G   E  K+ + M  +G + ++
Sbjct: 277 CSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDI 336

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y  LL      G + E   LL  M   G+ PD   ++ILI    KQ+KV +A+ ++++
Sbjct: 337 ATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSK 396

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M    ++PN   +GA++  LC+   + +A +YF+ +I      ++++Y  +I        
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDK 456

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             +A +L  +++++ I  + + FNS+I+  CK G+V ++ +L D +   G++P+ +TY+T
Sbjct: 457 WDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYST 516

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++ YC  G +     LL  M +  + P  VTY  +I G C+  ++ +A+ L ++M   G
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           V+P+ ITYN I++     +    A +L   +     +   +TYNI++ GLC N     A 
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEAL 636

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            +  +L   ++ L    +  +I A    G   +A   F  +   G    +R Y+
Sbjct: 637 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 690



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 161/644 (25%), Positives = 284/644 (44%), Gaps = 57/644 (8%)

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           TP  V+T  I+I   C+  RL      L     K F    ++   ++   C       A 
Sbjct: 84  TP-TVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 119 GLFCL-MLKYGLHPDAFSYNILIHGLCIAGSMEEALEF----TNDMGRHGVEPDAITYSI 173
            +    M +    PD FS  IL+ GLC     +EALE      +D G  G  PD ++Y+ 
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRG-GGSAPDVVSYTT 201

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +  GF        A+    ++L +   PD+VTY+ +I   C+   +++ +++   M+  G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              N + Y+ +L   C S +  EA+G L +M + G++PD+VTY+ L+  LCK  +  +A 
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           ++++ M  + + P+   +  +L G   K  + E     D ++ +    D  ++NI+I  Y
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K   + EA+ ++ ++ +  ++P++VT+ ++I   CK+G V DA    + +   GL P+ 
Sbjct: 382 AKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNI 441

Query: 414 VTYTTFMNA-----------------------------------YCEEGNIQRLLALLQE 438
           + YT+ +++                                   +C+EG +     L   
Sbjct: 442 IVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDL 501

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M    + P  +TY+ +I G C   K+ EA +LL  M+ +G+ PD +TYNT+I  +C+   
Sbjct: 502 MVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR 561

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           +  A  L  +M    + P   TYNI++ GL        A  L V + +    L    Y  
Sbjct: 562 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNI 621

Query: 559 IIKAHCAEGDVHKAMTFF-------CQMVEKGFEISI--------RDYTKSFFCMMLSNG 603
           I+   C      +A+  F        Q+  + F I I         D  K  F  + +NG
Sbjct: 622 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 681

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             PD     +M     + G L  + +L   M ++G   +  ++N
Sbjct: 682 LVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 725



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 140/543 (25%), Positives = 254/543 (46%)

Query: 44  TDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNA 103
           +D  +  Y ++       +V T S +I  LC+   +  A+  L         P+ ++ N+
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           I+  YC     + A G    M   G+ PD  +YN L+  LC  G   EA +  + M + G
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           +EPD  TY  L +G+     +     ++  ++  G  PD   + +LIC Y +   V+E +
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
            +   M   G   NV+ Y  ++  +CKSG +D+A+    +M   GL P+++ Y+ LI  L
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           C  DK  KA +L  EM  + I  N+    +I+   C++  + E+   FD ++      +V
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNV 511

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           + Y+ +IDGY   G + EA +L   +    + P  VT+N+LI G+C+  ++ DA  L   
Sbjct: 512 ITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +   G+ P+ +TY   +              L   +          TY +++ GLCK   
Sbjct: 572 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNL 631

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
             EA+++ +++ +  +  +  T+N +I +  K     +A  L   +  + L P   TY++
Sbjct: 632 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 691

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           + + L   G L+  D L +S++E+  +       +I++     GD+ +A T+   + EK 
Sbjct: 692 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKH 751

Query: 584 FEI 586
           F +
Sbjct: 752 FSL 754



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 255/563 (45%), Gaps = 61/563 (10%)

Query: 80  QDAILFLQETAGKEFGPSVVSLN------------AIMSRYCKLGFAEVAKGLFCLMLKY 127
           +DA    +E   +  G S+  LN            A +SRY ++  A   K         
Sbjct: 32  EDARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGK--------- 82

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            + P   +Y ILI   C AG ++       ++ + G   +AIT++ L KG     + S A
Sbjct: 83  -VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 188 WKVIQK---------------LLIK------------------------GSDPDIVTYTV 208
             ++ +               +L+K                        GS PD+V+YT 
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTT 201

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           +I G+ + G+ ++       ML +    +V+ YS +++++CK   +D+A+ +L  M   G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           + P+ +TY+ ++ G C  ++  +AI    +M S  + P+   + +++  LC+    TEAR
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             FDS+       D+  Y  ++ GY   G + E   L   ++   I P    FN LI  +
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            K  KV +A  +   ++ HGL P+ VTY   +   C+ G++   +   ++M  + + P  
Sbjct: 382 AKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNI 441

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           + YT +I  LC   K  +A +L+ +M   G+  + I +N+II S CK   + ++ +L + 
Sbjct: 442 IVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDL 501

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    ++P   TY+ LIDG C+ G +  A  LL S+    +    V Y T+I  +C    
Sbjct: 502 MVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR 561

Query: 569 VHKAMTFFCQMVEKGFEISIRDY 591
           +  A+  F +MV  G   +I  Y
Sbjct: 562 MDDALALFKEMVSSGVSPNIITY 584



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 241/544 (44%), Gaps = 71/544 (13%)

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           D+ RH        Y+ +A+        +GA KV          P + TY +LI   C+ G
Sbjct: 59  DVARHSPAAAVSRYNRMAR--------AGAGKVT---------PTVHTYGILIGCCCRAG 101

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL-LYEMEAVGLKPDLVTY 276
            ++ G      ++ +GF++  I ++ LL  +C   R  +A+ + L  M  +   PD+ + 
Sbjct: 102 RLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSC 161

Query: 277 SILIRGLCKQDKVHKAIQL--------------------------------------YNE 298
           +IL++GLC +++  +A++L                                      Y+E
Sbjct: 162 TILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHE 221

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  +RISP+   + +I+  LC+ + + +A     +++ +  + + + YN ++ GY     
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             EA+   +++    + P +VT+NSL+   CKNG+  +AR++ D++   GLEP   TY T
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCT 341

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +  Y  +G +  + ALL  M    I P H  + ++I    KQ K+ EA+ +   M   G
Sbjct: 342 LLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHG 401

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           + P+ +TY  +I   CK   +  A     QM    L P    Y  LI  LC+      A+
Sbjct: 402 LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAE 461

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFF 596
            L++ + +  I L  + + +II +HC EG V ++   F  MV  G + ++  Y+     +
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY 521

Query: 597 CM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           C+             M S G  PD      ++  + +   +     L   M+ SG+ P+ 
Sbjct: 522 CLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNI 581

Query: 644 FLIN 647
              N
Sbjct: 582 ITYN 585



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 227/498 (45%), Gaps = 35/498 (7%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T + ++ G C   + ++AI FL++       P VV+ N++M   CK G +  A+ +F
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M K GL PD  +Y  L+ G    G++ E     + M R+G+ PD   ++IL   +   
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  V  K+   G +P++VTY  +I   C+ G+V++ +   E M+ +G   N+I Y
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 242 SVLLSSMC-----------------------------------KSGRIDEALGLLYEMEA 266
           + L+ S+C                                   K GR+ E+  L   M  
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR 504

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           +G+KP+++TYS LI G C   K+ +A +L + M S  + P+   +  ++ G C    + +
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDD 564

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A   F  ++ S    +++ YNI++ G         A +LY  + +      + T+N +++
Sbjct: 565 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILH 624

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G CKN    +A R+   + L  L+    T+   + A  + G       L   +    + P
Sbjct: 625 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP 684

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              TY+++ + L +Q  L+E   L   M   G T +    N+I+R   +  D+ +A   L
Sbjct: 685 DVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYL 744

Query: 507 NQMWLHNLEPTSATYNIL 524
           + +   +    ++T ++L
Sbjct: 745 SMIDEKHFSLEASTASLL 762



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 220/466 (47%), Gaps = 5/466 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL----YNLRHTDIMWDLYDDIKVSETPR 61
           Y  +    +A+  + KM+   ++  + TYNSL+     N R T+    ++D +       
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE-ARKIFDSMTKRGLEP 334

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T   ++ G   +  L +    L         P     N ++  Y K    + A  +F
Sbjct: 335 DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVF 394

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M ++GL+P+  +Y  +I  LC +GS+++A+ +   M   G+ P+ I Y+ L     + 
Sbjct: 395 SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIF 454

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A ++I ++L +G   + + +  +I  +C+ G V E  KL ++M+  G K NVI Y
Sbjct: 455 DKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITY 514

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S L+   C +G++DEA  LL  M +VG+KPD VTY+ LI G C+  ++  A+ L+ EM S
Sbjct: 515 STLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVS 574

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +SPN   +  IL GL        A+  +  +  S    ++  YNI++ G  K     E
Sbjct: 575 SGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDE 634

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+++++ L    +     TFN +I    K G+  +A+ L   +  +GL P   TY+    
Sbjct: 635 ALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 694

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
              E+G ++ L  L   ME             +++ L ++  +  A
Sbjct: 695 NLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 189/379 (49%), Gaps = 5/379 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD--LYDDIKVSE 58
           +L   Y++   V +A+ V +KM++  L  ++ TY +++  L  +  + D  LY +  + E
Sbjct: 376 ILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE 435

Query: 59  --TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
             TP N+   + +I  LC   +   A   + E   +    + +  N+I+  +CK G    
Sbjct: 436 GLTP-NIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIE 494

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           ++ LF LM++ G+ P+  +Y+ LI G C+AG M+EA +  + M   G++PD +TY+ L  
Sbjct: 495 SEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN 554

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+  +S++  A  + ++++  G  P+I+TY +++ G           +L   +   G +L
Sbjct: 555 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQL 614

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +  Y+++L  +CK+   DEAL +   +    L+ +  T++I+I  L K  +  +A  L+
Sbjct: 615 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 674

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             + +  + P+   +  +   L E+ ++ E    F S+  + C  +  + N ++   ++ 
Sbjct: 675 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 734

Query: 357 GNIGEAVQLYRQLIEKRIS 375
           G+I  A      + EK  S
Sbjct: 735 GDITRAGTYLSMIDEKHFS 753


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 162/586 (27%), Positives = 272/586 (46%), Gaps = 57/586 (9%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NVY ++I++ GLC+      A+  L+E                                 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLRE--------------------------------- 167

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M +  L PD FSYN +I G C    +E+ALE  N+M   G     +T+ IL   F   
Sbjct: 168 --MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A   ++++   G + D+V YT LI G+C  G ++ G  L + +L +G     I Y
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   CK G++ EA  +   M   G++P++ TY+ LI GLC   K  +A+QL N M  
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   PN+  +  I+  LC+  ++ +A    + +       D + YNI++ G    G++ E
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405

Query: 362 AVQLYRQLIEKR--ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           A +L   +++      P ++++N+LI+G CK  ++  A  + D +         VT    
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N+  + G++ + + L +++    I     TYT +I G CK   L  A  LL  M V  +
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P    YN ++ S CK   L +A++L  +M   N  P   ++NI+IDG    GD+K+A+ 
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           LLV +    +S     Y+ +I      G + +A++FF +MV+ GFE              
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE-------------- 631

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                 PD  IC+ +L      G+   + EL   ++   ++ DK L
Sbjct: 632 ------PDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 146/531 (27%), Positives = 271/531 (51%), Gaps = 15/531 (2%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           SLL  +R   +M D             V++ + VI G C+   L+ A+    E  G    
Sbjct: 163 SLLREMRRNSLMPD-------------VFSYNTVIRGFCEGKELEKALELANEMKGSGCS 209

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
            S+V+   ++  +CK G  + A G    M   GL  D   Y  LI G C  G ++     
Sbjct: 210 WSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL 269

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            +++   G  P AITY+ L +GF  L Q+  A ++ + ++ +G  P++ TYT LI G C 
Sbjct: 270 FDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG 329

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +G  +E L+L  +M+ +  + N + Y+++++ +CK G + +A+ ++  M+    +PD +T
Sbjct: 330 VGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNIT 389

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMC--SKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           Y+IL+ GLC +  + +A +L   M   S    P+  ++ A++ GLC++  + +A   +D 
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L+      D V  NI+++  +K G++ +A++L++Q+ + +I  +  T+ ++I GFCK G 
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           +  A+ LL  +++  L+PS   Y   +++ C+EG++ +   L +EM+     P  V++ +
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I G  K   ++ A  LL  M   G++PD  TY+ +I  F K   L +A    ++M    
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
            EP +   + ++      G+      L+  L + +I L K    T++   C
Sbjct: 630 FEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/548 (27%), Positives = 261/548 (47%), Gaps = 57/548 (10%)

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
           VSL+ ++  Y ++     A G+  LMLK G   + +++NIL+ GLC      +A+    +
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M R+ + PD                                   + +Y  +I G+C+   
Sbjct: 168 MRRNSLMPD-----------------------------------VFSYNTVIRGFCEGKE 192

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           +E+ L+L   M   G   +++ + +L+ + CK+G++DEA+G L EM+ +GL+ DLV Y+ 
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           LIRG C   ++ +   L++E+  +  SP +  +  ++ G C+   + EA   F+ +I   
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              +V  Y  +IDG   +G   EA+QL   +IEK   P+ VT+N +I   CK+G VADA 
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM--ETKAIGPTHVTYTVVIK 456
            +++ +K     P  +TY   +   C +G++     LL  M  ++    P  ++Y  +I 
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLCK+ +L +A+ + + +       D++T N ++ S  K  D+ KA +L  Q+    +  
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            S TY  +IDG C  G L  A  LL  ++   +  +   Y  ++ + C EG + +A   F
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
            +M         RD           N F PD     +M+    + GD+ S   L   M +
Sbjct: 553 EEMQ--------RD-----------NNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592

Query: 637 SGLLPDKF 644
           +GL PD F
Sbjct: 593 AGLSPDLF 600



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 196/402 (48%), Gaps = 3/402 (0%)

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           Q+  A  V Q+ +  GS         L+    +  N E        ML     +N ++ S
Sbjct: 53  QLKNAVSVFQQAVDSGSSLAFAGNN-LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            LL    +  +   A G+L  M   G   ++  ++IL++GLC+  +  KA+ L  EM   
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+ F++  ++ G CE + + +A    + +  S C   +V + I+ID + K G + EA
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +   +++    +   +V + SLI GFC  G++   + L D +   G  P A+TY T +  
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +C+ G ++    + + M  + + P   TYT +I GLC   K +EA+QLL  M      P+
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL- 541
            +TYN II   CK   +  A +++  M      P + TYNIL+ GLC  GDL  A  LL 
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411

Query: 542 VSLQEHNISLTKV-AYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           + L++ + +   V +Y  +I   C E  +H+A+  +  +VEK
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 226/495 (45%), Gaps = 40/495 (8%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
            + + G + +A+  + +MK + L+  +  Y SL                           
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL--------------------------- 253

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
                I G C    L        E   +   P  ++ N ++  +CKLG  + A  +F  M
Sbjct: 254 -----IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G+ P+ ++Y  LI GLC  G  +EAL+  N M     EP+A+TY+I+         +
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML--SQGFKLNVIAYS 242
           + A ++++ +  + + PD +TY +L+ G C  G+++E  KL  +ML  S     +VI+Y+
Sbjct: 369 ADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYN 428

Query: 243 VLLSSMCKSGRIDEAL---GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            L+  +CK  R+ +AL    LL E    G   D VT +IL+    K   V+KA++L+ ++
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAMELWKQI 485

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
              +I  NS  + A++ G C+  M+  A+     + +S     V  YN ++    K G++
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A +L+ ++      P +V+FN +I G  K G +  A  LL  +   GL P   TY+  
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N + + G +   ++   +M      P       V+K    Q +  +  +L++ +    +
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665

Query: 480 TPDQITYNTIIRSFC 494
             D+    T++   C
Sbjct: 666 VLDKELTCTVMDYMC 680


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 170/675 (25%), Positives = 297/675 (44%), Gaps = 91/675 (13%)

Query: 38  LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPS 97
           L  +R   +  DL+D++   + P + Y  +  I   C+   L  A   L     K    S
Sbjct: 170 LIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGS 229

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
            V  N +M   C+      A  +   M++ G+  D  +Y  L++G C    +E ALE T+
Sbjct: 230 AVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTD 289

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKV--------------------------- 190
           DM      P   + S +  G      I  A+++                           
Sbjct: 290 DMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDR 349

Query: 191 --------IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
                    + +  +G +P+ VTY +LI   C+ G +++ L + + M  +G ++ V  Y+
Sbjct: 350 RFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYN 409

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++  C+     +A GLL EM   GL P   +YS LI GLC++  +  A++L+ EM   
Sbjct: 410 SLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARN 469

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +S N +    ++ G C+   + EA   FD +I S+ + + V +N+MI+GY ++GN+ +A
Sbjct: 470 GVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKA 529

Query: 363 VQLYRQLIEKRISPSIVTFNSLI-----------------------------------YG 387
            QLY Q++++ ++P   T+ SLI                                   YG
Sbjct: 530 FQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYG 589

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           FCK G++ +   + D ++  G++   +++T  + A  +  + +++  L +EM+ K + P 
Sbjct: 590 FCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPD 649

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
           +V +T +I    K+  + +A+   + M   G +P+ +TY  +I   CK   L  A  L  
Sbjct: 650 NVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCE 709

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M +    P S TYN  +D L   G+L+ A  L  ++ E  ++ T V + T+IK  C  G
Sbjct: 710 EMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANT-VTFNTLIKGFCKAG 768

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
            +  A+       E GF      Y+                E+C+V        GD+   
Sbjct: 769 QIQGAIDLMQNNTESGFFPDCISYSTII------------NELCKV--------GDINKA 808

Query: 628 FELAAVMIKSGLLPD 642
           F+L   M+  GL PD
Sbjct: 809 FQLWNEMLYKGLKPD 823



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/600 (26%), Positives = 272/600 (45%), Gaps = 74/600 (12%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPRNVY 64
           R   V +AV V   M E  +     TY +L+Y    T+   +  ++ DD+       +V 
Sbjct: 242 RNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVA 301

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           + S ++DGL ++  +  A             P++ + NA++ + CK      A+ LF  M
Sbjct: 302 SCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGM 361

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              GL P+  +Y ILIH LC  G M++AL   + M   G+      Y+ L  G+      
Sbjct: 362 ANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNF 421

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  ++ +++ KG  P   +Y+ LI G C+ G++   ++L   M   G   NV  ++ L
Sbjct: 422 HQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTL 481

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +S  CK G +DEA  L  +M    + P+ VT++++I G C+   V KA QLY++M  + +
Sbjct: 482 ISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGL 541

Query: 305 SP-----------------------------------NSFAHGAILLGLCEKEMITEARM 329
           +P                                   NSF+   ++ G C++  +TE   
Sbjct: 542 TPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYH 601

Query: 330 YFDSLIMSNCIQDVVLYNI-----------------------------------MIDGYV 354
            +D +       D++ + +                                   MID + 
Sbjct: 602 IWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHS 661

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K  NI +A+  + ++I    SP++VT+  LI   CK+G ++ A+ L + + +    P++ 
Sbjct: 662 KEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSF 721

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TY  F++    EG +++   L   +    +  T VT+  +IKG CK  ++Q A+ L+++ 
Sbjct: 722 TYNCFLDFLANEGELEKAKVLHATILEGCLANT-VTFNTLIKGFCKAGQIQGAIDLMQNN 780

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G  PD I+Y+TII   CK  D+ KAFQL N+M    L+P    YNILI    ++G+ 
Sbjct: 781 TESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEF 840



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/547 (26%), Positives = 263/547 (48%), Gaps = 15/547 (2%)

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
           +A+ LF  M++     D + Y   I   C   +++ A      M   GV+  A+ Y++L 
Sbjct: 178 LARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLM 237

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            G    +++  A +V   ++ +G   D VTY  L+ G+C+   +E  L++ + MLS  F 
Sbjct: 238 YGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFV 297

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +V + S ++  + K G ID+A  L   +  +G+ P+L   + LI  LCK  +  +A +L
Sbjct: 298 PSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERL 357

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +  M ++ + PN   +  ++  LC++ M+ +A   FD +        V  YN +I+GY +
Sbjct: 358 FRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQ 417

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
             N  +A  L  +++EK ++PS  +++ LI G C+ G +A A  L   +  +G+  +  T
Sbjct: 418 HDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYT 477

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           +TT ++ +C++GN+     L  +M   ++ P  VT+ V+I+G C+   +++A QL + M 
Sbjct: 478 FTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMV 537

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G+TPD  TY ++I   C      KA + ++ +  + +   S +   L+ G C  G L 
Sbjct: 538 DRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLT 597

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG------FEISIR 589
               +   ++   + L  +++T I+ A     D  K    F +M EKG      F   + 
Sbjct: 598 ETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMI 657

Query: 590 DY-------TKSFFCM--MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           D         ++  C   M+++G  P+     V++    + G L S   L   M+    L
Sbjct: 658 DVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFL 717

Query: 641 PDKFLIN 647
           P+ F  N
Sbjct: 718 PNSFTYN 724



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 237/487 (48%)

Query: 106 SRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE 165
           S Y +L  A  A  +  L L  G+    ++ + ++  L        A +  ++M +    
Sbjct: 133 SSYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFP 192

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
            D   Y+   + +  +  + GA  ++ ++  KG     V Y VL+ G C+   V E +++
Sbjct: 193 LDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEV 252

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
           +  M+ +G   + + Y  L+   C++  ++ AL +  +M ++   P + + S ++ GL K
Sbjct: 253 KNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRK 312

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
           +  + KA +L   +    + PN FA  A++  LC+     EA   F  +       + V 
Sbjct: 313 RGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVT 372

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y I+I    K G + +A+ ++ ++ EK I  ++  +NSLI G+C++     AR LL+ + 
Sbjct: 373 YAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMV 432

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             GL PSA +Y+  +   C +G++   + L +EM    +     T+T +I G CK   + 
Sbjct: 433 EKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMD 492

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA +L + M    V P+++T+N +I  +C+  ++RKAFQL +QM    L P + TY  LI
Sbjct: 493 EAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLI 552

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
             LC+      A   +  L+ + + L   + TT++   C EG + +    + +M  +G +
Sbjct: 553 SVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVK 612

Query: 586 ISIRDYT 592
           + +  +T
Sbjct: 613 LDLISFT 619



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 215/482 (44%), Gaps = 69/482 (14%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T +I+I  LC++  + DA+        K    +V   N++++ YC+      A+GL 
Sbjct: 369 NEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLL 428

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M++ GL P A SY+ LI GLC  G +  A+E   +M R+GV  +  T++ L  GF   
Sbjct: 429 NEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKD 488

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK------ 235
             +  A ++  K++     P+ VT+ V+I GYC++GNV +  +L + M+ +G        
Sbjct: 489 GNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTY 548

Query: 236 -----------------------------LNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
                                        LN  + + L+   CK GR+ E   +  EM A
Sbjct: 549 RSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRA 608

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G+K DL+++++++    K     K   L+ EM  K + P++  H  ++    ++E I +
Sbjct: 609 RGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQ 668

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS--------- 377
           A   +D +I   C  +VV Y ++I+   K G +  A  L  +++  R  P+         
Sbjct: 669 ALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLD 728

Query: 378 -------------------------IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
                                     VTFN+LI GFCK G++  A  L+      G  P 
Sbjct: 729 FLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPD 788

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            ++Y+T +N  C+ G+I +   L  EM  K + P  V Y ++I+      +  + + +  
Sbjct: 789 CISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYS 848

Query: 473 DM 474
           DM
Sbjct: 849 DM 850



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 211/437 (48%), Gaps = 4/437 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIM--WDLYDDIKVSETPRN 62
           Y +    H A  ++ +M E  L  S  +Y+ L+  L R  D+    +L+ ++  +    N
Sbjct: 415 YCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGN 474

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT + +I G C+   + +A     +       P+ V+ N ++  YC++G    A  L+ 
Sbjct: 475 VYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYD 534

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+  GL PD ++Y  LI  LC+     +A EF +D+  + V  ++ + + L  GF    
Sbjct: 535 QMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEG 594

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +++  + +  ++  +G   D++++TV++    ++ + E+   L   M  +G K + + ++
Sbjct: 595 RLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHT 654

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++    K   I +AL    +M A G  P++VTY++LI  LCK   +  A  L  EM   
Sbjct: 655 CMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVG 714

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
           R  PNSF +   L  L  +  + +A++   + I+  C+ + V +N +I G+ K G I  A
Sbjct: 715 RFLPNSFTYNCFLDFLANEGELEKAKV-LHATILEGCLANTVTFNTLIKGFCKAGQIQGA 773

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + L +   E    P  ++++++I   CK G +  A +L + +   GL+P  V Y   +  
Sbjct: 774 IDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRW 833

Query: 423 YCEEGNIQRLLALLQEM 439
               G   + L +  +M
Sbjct: 834 CNIHGEFDKGLGIYSDM 850



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 147/341 (43%), Gaps = 39/341 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           Y R G V  A  +  +M +  L     TY SL+  L  T       +  DD++ +    N
Sbjct: 520 YCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLN 579

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            ++ + ++ G C++ RL +      E   +     ++S   I+    KL   E    LF 
Sbjct: 580 SFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFR 639

Query: 123 LMLKYGLHPD-----------------------------------AFSYNILIHGLCIAG 147
            M + G+ PD                                     +Y +LI+ LC +G
Sbjct: 640 EMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSG 699

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            +  A     +M      P++ TY+          ++  A KV+   +++G   + VT+ 
Sbjct: 700 YLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFN 758

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            LI G+C+ G ++  + L +     GF  + I+YS +++ +CK G I++A  L  EM   
Sbjct: 759 TLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYK 818

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           GLKPD+V Y+ILIR      +  K + +Y++M + + + ++
Sbjct: 819 GLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVNLKYADDT 859


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 155/599 (25%), Positives = 276/599 (46%), Gaps = 38/599 (6%)

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           A L  +    + F    +    +++  CK GF + A+   C +L+ G   D      L+ 
Sbjct: 178 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 237

Query: 142 GLCIAGSMEEALEFTNDMGR-HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
             C    + EA      M +     P+++TYSIL  G     ++  A+++ Q+++ KG  
Sbjct: 238 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 297

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P   TYTVLI   C IG  ++ +K+ + M ++    NV  Y++L+  +C+ G+I+EA G+
Sbjct: 298 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 357

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
             +M   GL P ++T++ LI G CK+  V  A QL + M      PN   +  ++ GLC 
Sbjct: 358 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 417

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
                +A +    ++ +  + D V YNI++DG+ K G +  A  ++  +    + P   T
Sbjct: 418 VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFT 477

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM- 439
           F +LI G CK G++  A  +L ++   G+    VT+T  ++ +C+ G  + +  L + M 
Sbjct: 478 FTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMV 537

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
           E + +   H T+   +  L K +KL EA  +L  M   G+ P  +T+  +I   C+  + 
Sbjct: 538 ENRCLTTAH-TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 596

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
             + ++L +M      P   TY I+I+GLC NG ++ A+ +L S+    +S     Y  +
Sbjct: 597 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 656

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF--------------- 604
           +KAH   G + +A      MV+ G + +   Y+      +LSN                 
Sbjct: 657 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDAR 716

Query: 605 --------------------PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                                P +++   +++   + G +    +L   M+K GL PDK
Sbjct: 717 SLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK 775



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 174/638 (27%), Positives = 288/638 (45%), Gaps = 75/638 (11%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL-LYNLRHTDI--MWDLYDDIKVSETPR-NV 63
           + G V  A     K+  L   +      SL L N R  D+   + +++ +   E  R N 
Sbjct: 206 KNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNS 265

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T SI+I GLC+  RL++A    QE                                   
Sbjct: 266 VTYSILIHGLCEAGRLEEAFQLKQE----------------------------------- 290

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M++ G  P   +Y +LI   C  G  ++A++  ++M      P+  TY+IL        +
Sbjct: 291 MVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGK 350

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I  A  V +K+L  G  P I+T+  LI GYC+ G V    +L  VM     K N+  Y+ 
Sbjct: 351 IEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNE 410

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +C+  +  +A  LL  +   GL PD VTY+IL+ G CK+ +++ A  ++N M S  
Sbjct: 411 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 470

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P+ F   A++ GLC+   + +A     S++      D V +  +IDG+ K+G   +  
Sbjct: 471 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 530

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L+  ++E R   +  TFN  +    K+ K+ +A  +L  +  +GL PS VT+T  +  +
Sbjct: 531 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 590

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C  G     L +L+ M+     P   TYT++I GLC   +++EA  +L  M   GV+P+ 
Sbjct: 591 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNH 650

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG------------LCVN 531
            TY  ++++  K   L +AFQ+++ M  +  +P S  Y+ L+ G            L   
Sbjct: 651 FTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSST 710

Query: 532 GDL---------KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           GDL          + +CL   +++  +  T+  Y  ++   C EG + +A      MV+ 
Sbjct: 711 GDLDARSLSSEENDNNCLSNEIKKCGVP-TEDLYNFLVVGLCKEGRIIEADQLTQDMVKH 769

Query: 583 GF----EIS--IRDYTKS--------FFCMMLSNGFPP 606
           G      IS  I  Y K+        F  ++L N F P
Sbjct: 770 GLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVP 807



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 178/389 (45%), Gaps = 36/389 (9%)

Query: 229 MLSQGFKLNVIAYSVLL-----------------------------------SSMCKSGR 253
           M   GF+L+   YS LL                                   +++CK+G 
Sbjct: 150 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 209

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR-ISPNSFAHG 312
           +  A     ++  +G   D    + L+   C++D + +A +++ +M  +    PNS  + 
Sbjct: 210 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYS 269

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++ GLCE   + EA      ++   C      Y ++I     +G   +A+++  ++  K
Sbjct: 270 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 329

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P++ T+  LI   C+ GK+ +A  +   +  HGL P  +T+   +N YC+EG +   
Sbjct: 330 ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSA 389

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             LL  ME     P   TY  +++GLC+  K  +A  LL  +   G+ PD++TYN ++  
Sbjct: 390 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 449

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
           FCK   L  AF + N M    LEP   T+  LIDGLC  G L+ A+ +L S+ +  ISL 
Sbjct: 450 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 509

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           +V +T +I  HC  G        F  MVE
Sbjct: 510 EVTFTALIDGHCKIGKAKDVCFLFENMVE 538



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 220/490 (44%), Gaps = 59/490 (12%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR---NVY 64
           R G + +A  V  KM +  L   I T+N+L+        +   +  + V E      N+ 
Sbjct: 347 REGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIR 406

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +++GLC+ S+   A L L+        P  V+ N ++  +CK G   +A  +F  M
Sbjct: 407 TYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 466

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF------ 178
              GL PD F++  LI GLC  G +E+A      M + G+  D +T++ L  G       
Sbjct: 467 NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKA 526

Query: 179 -------------------HLLS----------QISGAWKVIQKLLIKGSDPDIVTYTVL 209
                              H  +          +++ A  ++ K++  G  P +VT+T+L
Sbjct: 527 KDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 586

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G+C+ G     LK+ E M   G   NV  Y+++++ +C +GR++EA  +L+ M + G+
Sbjct: 587 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGV 646

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P+  TY++L++   K  ++ +A Q+ + M      PNS  + A+L G         AR 
Sbjct: 647 SPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARA 706

Query: 330 Y-----FDSLIMS------NCIQDVV---------LYNIMIDGYVKLGNIGEAVQLYRQL 369
                  D+  +S      NC+ + +         LYN ++ G  K G I EA QL + +
Sbjct: 707 LSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDM 766

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           ++  + P     +S+I  +CK  K  +    +  +  +   PS  +Y   ++    EG +
Sbjct: 767 VKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRV 825

Query: 430 QRLLALLQEM 439
           Q    L+ ++
Sbjct: 826 QEAQKLVSDL 835



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 16/299 (5%)

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  +YR+++ +      + + +++   CKNG V  A      +   G        T+ + 
Sbjct: 178 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 237

Query: 422 AYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           A C   ++     + ++M + +   P  VTY+++I GLC+  +L+EA QL ++M   G  
Sbjct: 238 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 297

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P   TY  +I++ C      KA ++L++M      P   TY ILID LC  G ++ A+ +
Sbjct: 298 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 357

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY--------- 591
              + +H +    + +  +I  +C EG V  A      M +   + +IR Y         
Sbjct: 358 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 417

Query: 592 -TKSFFCMML-----SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
            +KS+   +L      NG  PD+    +++  F + G L   F +   M  +GL PD F
Sbjct: 418 VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 476


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 130/395 (32%), Positives = 220/395 (55%), Gaps = 6/395 (1%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
             + N ++   C  G  + A+ L   +L+    P+A +YN +I G C  G ++ AL+   
Sbjct: 483 TTTFNIMLRHLCSAG--KPARALE--LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMR 538

Query: 158 DMG-RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQ 215
           +M  R G+ P+  TY  +  G+  + ++  A KV  ++L KG   P+ V Y  LI GYC 
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G ++  L  R+ M+ +G  + V  Y++L+ ++   GR  EA  L+ EM   GL PD+ T
Sbjct: 599 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 658

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ILI G CK+  V KA++++  M  + +      + A++  L +K  + E    FD  +
Sbjct: 659 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 718

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D+VLYN +I+ +   GNI  A ++  ++ +KRI+P  VT+N+L+ G C  G+V 
Sbjct: 719 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 778

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +AR+L+D +   G++P  VTY T ++ Y  +G+++  L +  EM  K   PT +TY  +I
Sbjct: 779 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 838

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           +GLCK  +  +A  ++++M   G+TPD  TY ++I
Sbjct: 839 QGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 873



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 226/474 (47%), Gaps = 45/474 (9%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           S  SL+ ++S       +  A  LF  M +  L     ++NI++  LC AG    ALE  
Sbjct: 451 STASLHPLLSALP----SAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELL 506

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
             M R                                       P+ VTY  +I G+C  
Sbjct: 507 RQMPR---------------------------------------PNAVTYNTVIAGFCSR 527

Query: 217 GNVEEGLK-LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG-LKPDLV 274
           G V+  L  +RE+    G   N   Y  ++S  CK GR+DEA+ +  EM   G +KP+ V
Sbjct: 528 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV 587

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
            Y+ LI G C Q K+  A+   + M  + ++     +  ++  L      TEA    + +
Sbjct: 588 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 647

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                  DV  YNI+I+G+ K GN+ +A++++  +  + +  ++VT+ +LIY   K G+V
Sbjct: 648 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 707

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +  +L D     G+ P  V Y   +N++   GNI R   ++ EME K I P  VTY  +
Sbjct: 708 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 767

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           ++GLC   ++ EA +L+++M   G+ PD +TYNT+I  +    D++ A ++ N+M     
Sbjct: 768 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 827

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
            PT  TYN LI GLC NG   +A+ ++  + E+ I+     Y ++I+    E +
Sbjct: 828 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 221/416 (53%), Gaps = 7/416 (1%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           A  + A M  L L +   T+N +L +L          + ++    P N  T + VI G C
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRP-NAVTYNTVIAGFC 525

Query: 75  QQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LH 130
            + R+Q A+  ++E   +E G   P+  +   ++S +CK+G  + A  +F  ML  G + 
Sbjct: 526 SRGRVQAALDIMREM--RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK 583

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+A  YN LI G C  G ++ AL + + M   GV     TY++L     +  + + A+++
Sbjct: 584 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 643

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++++  KG  PD+ TY +LI G+C+ GNV++ L++ E M  +G +  V+ Y+ L+ ++ K
Sbjct: 644 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 703

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++ E   L  E    G++PDLV Y+ LI        + +A ++  EM  KRI+P+   
Sbjct: 704 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 763

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ GLC    + EAR   D +       D+V YN +I GY   G++ +A+++  +++
Sbjct: 764 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 823

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            K  +P+++T+N+LI G CKNG+  DA  ++  +  +G+ P   TY + +     E
Sbjct: 824 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 879



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 207/397 (52%), Gaps = 23/397 (5%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M      L    ++++L  +C +G+   AL LL +M     +P+ VTY+ +I G C + +
Sbjct: 474 MFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGR 529

Query: 289 VHKAIQLYNEMCSKR-ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLY 346
           V  A+ +  EM  +  I+PN + +G ++ G C+   + EA   FD ++    ++ + V+Y
Sbjct: 530 VQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY 589

Query: 347 NIMIDGYVKLGNIGEAVQLYR-QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           N +I GY   G +  A+ LYR +++E+ ++ ++ T+N L++    +G+  +A  L++ + 
Sbjct: 590 NALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 648

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             GL P   TY   +N +C+EGN+++ L + + M  + +  T VTYT +I  L K+ ++Q
Sbjct: 649 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 708

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           E  +L ++    G+ PD + YN +I S     ++ +AF+++ +M    + P   TYN L+
Sbjct: 709 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 768

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            GLC+ G +  A  L+  + E  I    V Y T+I  +  +GDV  A+    +M+ KGF 
Sbjct: 769 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 828

Query: 586 ISIRDYT---------------KSFFCMMLSNGFPPD 607
            ++  Y                ++    M+ NG  PD
Sbjct: 829 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 865



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 189/382 (49%), Gaps = 6/382 (1%)

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
            T+ +++   C  G     L+L    L Q  + N + Y+ +++  C  GR+  AL ++ E
Sbjct: 484 TTFNIMLRHLCSAGKPARALEL----LRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMRE 539

Query: 264 M-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK-RISPNSFAHGAILLGLCEK 321
           M E  G+ P+  TY  +I G CK  +V +A+++++EM +K  + P +  + A++ G C++
Sbjct: 540 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 599

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             +  A +Y D ++       V  YN+++      G   EA +L  ++  K ++P + T+
Sbjct: 600 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 659

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N LI G CK G V  A  + + +   G+  + VTYT  + A  ++G +Q    L  E   
Sbjct: 660 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 719

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           + I P  V Y  +I        +  A +++ +M    + PD +TYNT++R  C    + +
Sbjct: 720 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 779

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A +L+++M    ++P   TYN LI G  + GD+K+A  +   +     + T + Y  +I+
Sbjct: 780 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 839

Query: 562 AHCAEGDVHKAMTFFCQMVEKG 583
             C  G    A     +MVE G
Sbjct: 840 GLCKNGQGDDAENMVKEMVENG 861



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 160/287 (55%), Gaps = 5/287 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y   G +  A+    +M E  + +++ TYN L++ L    R T+  ++L +++       
Sbjct: 596 YCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE-AYELVEEMGGKGLAP 654

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+T +I+I+G C++  ++ A+   +  + +    +VV+  A++    K G  +    LF
Sbjct: 655 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 714

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              ++ G+ PD   YN LI+    +G+++ A E   +M +  + PD +TY+ L +G  LL
Sbjct: 715 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 774

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A K+I ++  +G  PD+VTY  LI GY   G+V++ L++R  M+++GF   ++ Y
Sbjct: 775 GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 834

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           + L+  +CK+G+ D+A  ++ EM   G+ PD  TY  LI GL  +D+
Sbjct: 835 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 188/421 (44%), Gaps = 30/421 (7%)

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           L+L   M S    ++  +   LLS++  +     A  L  +M  + L     T++I++R 
Sbjct: 437 LRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRH 492

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-Q 341
           LC   K  +A++L  +M      PN+  +  ++ G C +  +  A      +     I  
Sbjct: 493 LCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 548

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRL 400
           +   Y  +I G+ K+G + EAV+++ +++ K  + P  V +N+LI G+C  GK+  A   
Sbjct: 549 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 608

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            D +   G+  +  TY   ++A   +G       L++EM  K + P   TY ++I G CK
Sbjct: 609 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCK 668

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
           +  +++A+++ E+M   GV    +TY  +I +  K   +++  +L ++     + P    
Sbjct: 669 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 728

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           YN LI+    +G++  A  ++  +++  I+   V Y T+++  C  G V +A     +M 
Sbjct: 729 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 788

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           E+G                      PD      ++  +   GD+     +   M+  G  
Sbjct: 789 ERG--------------------IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 828

Query: 641 P 641
           P
Sbjct: 829 P 829



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 134/303 (44%), Gaps = 21/303 (6%)

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+  +   R+     TFN ++   C  GK A A  LL  +      P+AVTY T + 
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 522

Query: 422 AYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-V 479
            +C  G +Q  L +++EM E   I P   TY  VI G CK  ++ EAV++ ++M   G V
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+ + YN +I  +C    L  A    ++M    +  T ATYN+L+  L ++G    A  
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY-------- 591
           L+  +    ++     Y  +I  HC EG+V KA+  F  M  +G   ++  Y        
Sbjct: 643 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 702

Query: 592 -------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                  T   F   +  G  PD  +   ++ +    G++   FE+   M K  + PD  
Sbjct: 703 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 762

Query: 645 LIN 647
             N
Sbjct: 763 TYN 765



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 158/321 (49%), Gaps = 4/321 (1%)

Query: 6   YSRTGMVHDAVFVIAKM-KELDLKVSIQTYNSLL--YNLRHTDIMWDLYDDIKVSE-TPR 61
           + + G V +AV V  +M  + ++K     YN+L+  Y  +       LY D  V      
Sbjct: 560 WCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAM 619

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V T ++++  L    R  +A   ++E  GK   P V + N +++ +CK G  + A  +F
Sbjct: 620 TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 679

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+     +Y  LI+ L   G ++E  +  ++  R G+ PD + Y+ L       
Sbjct: 680 ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 739

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             I  A++++ ++  K   PD VTY  L+ G C +G V+E  KL + M  +G + +++ Y
Sbjct: 740 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 799

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+S     G + +AL +  EM   G  P L+TY+ LI+GLCK  +   A  +  EM  
Sbjct: 800 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 859

Query: 302 KRISPNSFAHGAILLGLCEKE 322
             I+P+   + +++ GL  ++
Sbjct: 860 NGITPDDSTYISLIEGLTTED 880


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 244/469 (52%), Gaps = 11/469 (2%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           + +YGL P   S N ++  L     ++EA+    ++    V     +++IL K      +
Sbjct: 219 LRQYGLSPSPESCNAVLSRL----PLDEAIALFRELPDKNV----CSHNILLKALLSAGR 270

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A +   ++    S PD+VTY  ++ GYC  G +E  +KL + M ++G + N   Y+ 
Sbjct: 271 LKDACQHFDEM---SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTS 327

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +++ +C  G++ +AL +L +M   G+  D V ++ +I G C +  +  A +L+ EM  + 
Sbjct: 328 VIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRG 387

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++ +   H A++ GLC    + EA      ++      DVV Y ++IDGY K GN+ EA 
Sbjct: 388 LAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAF 447

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +++ +++ +R++P++VT+ +L  G CK G V  A  LL  +   GLE +  TY + +N  
Sbjct: 448 RVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGL 507

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ GN+++ + ++ EME         TYT +I  LCK  +   A  +L++M   G+ P  
Sbjct: 508 CKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSI 567

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            TYN ++  FC    +    +LL  M   N+ P   TYN L+   C++ ++K+   +   
Sbjct: 568 ATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKG 627

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +    ++  +  Y  +IK HC   ++ +A+ F  +M+EKG  ++   Y+
Sbjct: 628 MHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYS 676



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 262/509 (51%), Gaps = 8/509 (1%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
           ++ ++++  L  S ++ N++L  L   D    L+ ++      +NV +++I++  L    
Sbjct: 215 LLRRLRQYGLSPSPESCNAVLSRL-PLDEAIALFRELP----DKNVCSHNILLKALLSAG 269

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           RL+DA     E +     P VV+   ++  YC  G  E A  L   M   GL  +A  Y 
Sbjct: 270 RLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYT 326

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
            +I  LC  G + +AL    DM  HGV  DA+ ++ +  GF     ++ A ++ +++  +
Sbjct: 327 SVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKR 386

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G   D VT+T LI G C+ G ++E  ++ + M+ +G  ++V+ Y+VL+   CK G + EA
Sbjct: 387 GLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEA 446

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             +  EM    + P++VTY+ L  GLCKQ  V  A +L +EMC+K +  N + + +++ G
Sbjct: 447 FRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLING 506

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC+   + +A      +  +    DV  Y  +ID   K G    A  + +++++K I PS
Sbjct: 507 LCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPS 566

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           I T+N L+ GFC +G+V   ++LL+ +    + P+ VTY + M  YC + N++    + +
Sbjct: 567 IATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYK 626

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            M ++ + P   TY ++IKG CK   ++EA+   ++M   G+     +Y+ +IR   K K
Sbjct: 627 GMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKK 686

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILID 526
              +A    ++M    L      Y+  +D
Sbjct: 687 KFSEARVFFDKMRNEGLTAEPDVYSFYMD 715



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 252/497 (50%), Gaps = 17/497 (3%)

Query: 92  KEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF--SYNILIHGLCIAG 147
           +++G  PS  S NA++SR   L   E A  LF  +      PD    S+NIL+  L  AG
Sbjct: 220 RQYGLSPSPESCNAVLSR---LPLDE-AIALFREL------PDKNVCSHNILLKALLSAG 269

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            +++A +  ++M      PD +TY  +  G+ +  ++  A K++ ++  KG + +   YT
Sbjct: 270 RLKDACQHFDEMSS---PPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYT 326

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            +I   C  G V + L++ E M   G  L+ + ++ ++S  C  G +  A  L  EM+  
Sbjct: 327 SVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKR 386

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL  D VT++ LI GLC+  ++ +A ++  EM  K +  +   +  ++ G C++  + EA
Sbjct: 387 GLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEA 446

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
               + ++      +VV Y  + DG  K G++  A +L  ++  K +  ++ T+NSLI G
Sbjct: 447 FRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLING 506

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G +  A R++  ++  G      TYTT ++  C+ G   R   +LQEM  K I P+
Sbjct: 507 LCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPS 566

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TY V++ G C   +++   +LLE M    V P+ +TYN++++ +C  K+++   ++  
Sbjct: 567 IATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYK 626

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M    + P   TYNILI G C   ++K A      + E  + LT  +Y+ +I+    + 
Sbjct: 627 GMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKK 686

Query: 568 DVHKAMTFFCQMVEKGF 584
              +A  FF +M  +G 
Sbjct: 687 KFSEARVFFDKMRNEGL 703



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 157/310 (50%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T +++IDG C++  + +A     E  G+   P+VV+  A+    CK G    A  L 
Sbjct: 426 DVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELL 485

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   GL  + ++YN LI+GLC  G++E+A+    +M   G   D  TY+ L       
Sbjct: 486 HEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKS 545

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A  ++Q++L KG  P I TY VL+ G+C  G VE G KL E ML +  + NV+ Y
Sbjct: 546 GEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTY 605

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C    +     +   M +  + P+  TY+ILI+G CK   + +A+  + EM  
Sbjct: 606 NSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIE 665

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K +   + ++ A++  L +K+  +EAR++FD +       +  +Y+  +D      N+  
Sbjct: 666 KGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLES 725

Query: 362 AVQLYRQLIE 371
            + L  +L+E
Sbjct: 726 TITLCDELVE 735



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 126/295 (42%), Gaps = 38/295 (12%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G V  A  ++ +M    L++++ TYNSL+  L    + +    +  +++ +    +VY
Sbjct: 474 KQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVY 533

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +ID LC+      A   LQE   K   PS+ + N +M+ +C  G  E  K L   M
Sbjct: 534 TYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWM 593

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L+  + P+  +YN L+   CI  +M+   E    M    V P+  TY+IL K        
Sbjct: 594 LEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIK-------- 645

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
                                      G+C+  N++E L   + M+ +G +L   +YS L
Sbjct: 646 ---------------------------GHCKARNMKEALYFHQEMIEKGLRLTASSYSAL 678

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           +  + K  +  EA     +M   GL  +   YS  +     +D +   I L +E+
Sbjct: 679 IRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDEL 733


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 259/508 (50%), Gaps = 8/508 (1%)

Query: 61  RNVYTNSIVIDGLCQQS-----RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
           R+  + + V+  LC++      + +  ++ +   A     P+ VS   +M   C      
Sbjct: 81  RDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTG 140

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            A  L   M   G+  D  +Y  LI GLC A  ++ ALE  ++M   GV+P+ + YS L 
Sbjct: 141 EAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLL 200

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
           +G+    +     KV + +  +G  PD++ +T LI   C+ G   +  K++++M+ +G +
Sbjct: 201 RGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLE 260

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            NV+ Y+VL++S+CK G + EAL L  EM+  G+ PD+VTY+ LI GL    ++ +A+  
Sbjct: 261 PNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSF 320

Query: 296 YNEMCSKR--ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
             EM      + P+     +++ GLC+   +T+A    + +    C+ ++V YN +I G+
Sbjct: 321 LEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGF 380

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           +++  +  A+ L  +L    + P   T++ LI GF K  +V  A + L T++  G++   
Sbjct: 381 LRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAEL 440

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
             Y   + A C++G ++R + L  EM+ K  G   + Y+ +I G CK   ++   QL++D
Sbjct: 441 FHYIPLLAAMCQQGMMERAMGLFNEMD-KNCGLDAIAYSTMIHGACKSGDMKTVKQLIQD 499

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G+ PD +TY+ +I  + K  DL +A ++L QM      P  A ++ LI G    G 
Sbjct: 500 MLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQ 559

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIK 561
                 L+  ++  N++      +TII+
Sbjct: 560 TDKVLKLIHEMRAKNVAFDPKIISTIIR 587



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 250/492 (50%), Gaps = 8/492 (1%)

Query: 98  VVSLNAIMSRYCKLGFAEV--AKGLFCLMLKYG---LHPDAFSYNILIHGLCIAGSMEEA 152
            VS N +++  C+ G   +  A+ L   M +       P+A SY  ++ GLC +    EA
Sbjct: 83  AVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEA 142

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           +     M   GV  D +TY  L +G    S++  A +++ ++   G  P++V Y+ L+ G
Sbjct: 143 VALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRG 202

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           YC+ G  ++  K+ E M  +G K +VI ++ L+  +CK G+  +A  +   M   GL+P+
Sbjct: 203 YCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPN 262

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY++LI  LCK+  V +A+ L  EM  K ++P+   +  ++ GL     + EA  + +
Sbjct: 263 VVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLE 322

Query: 333 SLIMSNCI--QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            +I  + +   DVV +N +I G  K+G + +AV++   + E+    ++VT+N LI GF +
Sbjct: 323 EMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLR 382

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
             KV  A  L+D + + GLEP + TY+  +N + +   + R    L  M  + I      
Sbjct: 383 VHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFH 442

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  ++  +C+Q  ++ A+ L  +M       D I Y+T+I   CK  D++   QL+  M 
Sbjct: 443 YIPLLAAMCQQGMMERAMGLFNEMDK-NCGLDAIAYSTMIHGACKSGDMKTVKQLIQDML 501

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              L P + TY++LI+     GDL+ A+ +L  +           + ++IK + AEG   
Sbjct: 502 DEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTD 561

Query: 571 KAMTFFCQMVEK 582
           K +    +M  K
Sbjct: 562 KVLKLIHEMRAK 573



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 224/460 (48%), Gaps = 8/460 (1%)

Query: 132 DAFSYNILIHGLCIAGS--MEEALEFTNDMGRHG---VEPDAITYSILAKGFHLLSQISG 186
           DA SYN ++  LC  G   + +A     DM R       P+A++Y+ + +G     +   
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  +++ +   G   D+VTY  LI G C    ++  L+L + M   G + NV+ YS LL 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             C+SGR  +   +  +M   G+KPD++ ++ LI  LCK+ K  KA ++ + M  + + P
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N   +  ++  LC++  + EA      +       DVV YN +I G   +  + EA+   
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321

Query: 367 RQLIEKR--ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
            ++I+    + P +VTFNS+I+G CK G++  A ++ + +   G   + VTY   +  + 
Sbjct: 322 EEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFL 381

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
               ++  + L+ E+    + P   TY+++I G  K W++  A + L  M   G+  +  
Sbjct: 382 RVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELF 441

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y  ++ + C+   + +A  L N+M   N    +  Y+ +I G C +GD+K    L+  +
Sbjct: 442 HYIPLLAAMCQQGMMERAMGLFNEMD-KNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDM 500

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            +  ++   V Y+ +I  +   GD+ +A     QM   GF
Sbjct: 501 LDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGF 540



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 226/467 (48%), Gaps = 31/467 (6%)

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLRE-----VMLSQ----GFKLNVIAYSVLLSSMCKSG 252
           D V+Y  ++   C+ G    G  LR+     V +S+      + N ++Y+ ++  +C S 
Sbjct: 82  DAVSYNTVLAALCRRG----GDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASR 137

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           R  EA+ LL  M+A G++ D+VTY  LIRGLC   ++  A++L +EMC   + PN   + 
Sbjct: 138 RTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYS 197

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            +L G C      +    F+ +       DV+++  +ID   K G  G+A ++   ++++
Sbjct: 198 CLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQR 257

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            + P++VT+N LI   CK G V +A  L   +   G+ P  VTY T +        +   
Sbjct: 258 GLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEA 317

Query: 433 LALLQEM--ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           ++ L+EM      + P  VT+  VI GLCK  ++ +AV++ E M   G   + +TYN +I
Sbjct: 318 MSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLI 377

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             F +   ++ A  L++++ +  LEP S TY+ILI+G     ++  A+  L ++++  I 
Sbjct: 378 GGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIK 437

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSF 595
                Y  ++ A C +G + +AM  F +M +K   +    Y+               K  
Sbjct: 438 AELFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQL 496

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              ML  G  PD     +++  + + GDL     +   M  SG +PD
Sbjct: 497 IQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPD 543



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 209/453 (46%), Gaps = 41/453 (9%)

Query: 33  TYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           +Y +++  L   R T     L   ++ S    +V T   +I GLC  S L  A+  L E 
Sbjct: 125 SYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEM 184

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
            G    P+VV  + ++  YC+ G  +    +F  M + G+ PD   +  LI  LC  G  
Sbjct: 185 CGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKT 244

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
            +A +  + M + G+EP+ +TY++L         +  A  + +++  KG  PD+VTY  L
Sbjct: 245 GKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTL 304

Query: 210 IC-------------------------------------GYCQIGNVEEGLKLREVMLSQ 232
           I                                      G C+IG + + +K+RE+M  +
Sbjct: 305 IAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAER 364

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   N++ Y+ L+    +  ++  A+ L+ E+   GL+PD  TYSILI G  K  +V +A
Sbjct: 365 GCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRA 424

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            +    M  + I    F +  +L  +C++ M+  A   F+ +   NC  D + Y+ MI G
Sbjct: 425 EKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD-KNCGLDAIAYSTMIHG 483

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
             K G++    QL + ++++ ++P  VT++ LI  + K G + +A R+L  +   G  P 
Sbjct: 484 ACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPD 543

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
              + + +  Y  EG   ++L L+ EM  K + 
Sbjct: 544 VAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVA 576


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 130/395 (32%), Positives = 220/395 (55%), Gaps = 6/395 (1%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
             + N ++   C  G  + A+ L   +L+    P+A +YN +I G C  G ++ AL+   
Sbjct: 114 TTTFNIMLRHLCSAG--KPARALE--LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMR 169

Query: 158 DMG-RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQ 215
           +M  R G+ P+  TY  +  G+  + ++  A KV  ++L KG   P+ V Y  LI GYC 
Sbjct: 170 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 229

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G ++  L  R+ M+ +G  + V  Y++L+ ++   GR  EA  L+ EM   GL PD+ T
Sbjct: 230 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 289

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ILI G CK+  V KA++++  M  + +      + A++  L +K  + E    FD  +
Sbjct: 290 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 349

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D+VLYN +I+ +   GNI  A ++  ++ +KRI+P  VT+N+L+ G C  G+V 
Sbjct: 350 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 409

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +AR+L+D +   G++P  VTY T ++ Y  +G+++  L +  EM  K   PT +TY  +I
Sbjct: 410 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 469

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           +GLCK  +  +A  ++++M   G+TPD  TY ++I
Sbjct: 470 QGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 504



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 218/454 (48%), Gaps = 41/454 (9%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  M +  L     ++NI++  LC AG    ALE    M R               
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR--------------- 142

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LREVMLSQGFK 235
                                   P+ VTY  +I G+C  G V+  L  +RE+    G  
Sbjct: 143 ------------------------PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIA 178

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG-LKPDLVTYSILIRGLCKQDKVHKAIQ 294
            N   Y  ++S  CK GR+DEA+ +  EM   G +KP+ V Y+ LI G C Q K+  A+ 
Sbjct: 179 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 238

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
             + M  + ++     +  ++  L      TEA    + +       DV  YNI+I+G+ 
Sbjct: 239 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 298

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K GN+ +A++++  +  + +  ++VT+ +LIY   K G+V +  +L D     G+ P  V
Sbjct: 299 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 358

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            Y   +N++   GNI R   ++ EME K I P  VTY  +++GLC   ++ EA +L+++M
Sbjct: 359 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 418

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+ PD +TYNT+I  +    D++ A ++ N+M      PT  TYN LI GLC NG  
Sbjct: 419 TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 478

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
            +A+ ++  + E+ I+     Y ++I+    E +
Sbjct: 479 DDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 221/416 (53%), Gaps = 7/416 (1%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           A  + A M  L L +   T+N +L +L          + ++    P N  T + VI G C
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRP-NAVTYNTVIAGFC 156

Query: 75  QQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LH 130
            + R+Q A+  ++E   +E G   P+  +   ++S +CK+G  + A  +F  ML  G + 
Sbjct: 157 SRGRVQAALDIMREM--RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK 214

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+A  YN LI G C  G ++ AL + + M   GV     TY++L     +  + + A+++
Sbjct: 215 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 274

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++++  KG  PD+ TY +LI G+C+ GNV++ L++ E M  +G +  V+ Y+ L+ ++ K
Sbjct: 275 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 334

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++ E   L  E    G++PDLV Y+ LI        + +A ++  EM  KRI+P+   
Sbjct: 335 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 394

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ GLC    + EAR   D +       D+V YN +I GY   G++ +A+++  +++
Sbjct: 395 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 454

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            K  +P+++T+N+LI G CKNG+  DA  ++  +  +G+ P   TY + +     E
Sbjct: 455 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 510



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 205/386 (53%), Gaps = 23/386 (5%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++++L  +C +G+   AL LL +M     +P+ VTY+ +I G C + +V  A+ +  EM 
Sbjct: 117 FNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMR 172

Query: 301 SKR-ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGN 358
            +  I+PN + +G ++ G C+   + EA   FD ++    ++ + V+YN +I GY   G 
Sbjct: 173 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 232

Query: 359 IGEAVQLYR-QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           +  A+ LYR +++E+ ++ ++ T+N L++    +G+  +A  L++ +   GL P   TY 
Sbjct: 233 LDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 291

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N +C+EGN+++ L + + M  + +  T VTYT +I  L K+ ++QE  +L ++    
Sbjct: 292 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 351

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD + YN +I S     ++ +AF+++ +M    + P   TYN L+ GLC+ G +  A
Sbjct: 352 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 411

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY------ 591
             L+  + E  I    V Y T+I  +  +GDV  A+    +M+ KGF  ++  Y      
Sbjct: 412 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 471

Query: 592 ---------TKSFFCMMLSNGFPPDQ 608
                     ++    M+ NG  PD 
Sbjct: 472 LCKNGQGDDAENMVKEMVENGITPDD 497



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 189/383 (49%), Gaps = 6/383 (1%)

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
            T+ +++   C  G     L+L    L Q  + N + Y+ +++  C  GR+  AL ++ E
Sbjct: 115 TTFNIMLRHLCSAGKPARALEL----LRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMRE 170

Query: 264 M-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK-RISPNSFAHGAILLGLCEK 321
           M E  G+ P+  TY  +I G CK  +V +A+++++EM +K  + P +  + A++ G C++
Sbjct: 171 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 230

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             +  A +Y D ++       V  YN+++      G   EA +L  ++  K ++P + T+
Sbjct: 231 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 290

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N LI G CK G V  A  + + +   G+  + VTYT  + A  ++G +Q    L  E   
Sbjct: 291 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 350

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           + I P  V Y  +I        +  A +++ +M    + PD +TYNT++R  C    + +
Sbjct: 351 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 410

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A +L+++M    ++P   TYN LI G  + GD+K+A  +   +     + T + Y  +I+
Sbjct: 411 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 470

Query: 562 AHCAEGDVHKAMTFFCQMVEKGF 584
             C  G    A     +MVE G 
Sbjct: 471 GLCKNGQGDDAENMVKEMVENGI 493



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 160/287 (55%), Gaps = 5/287 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y   G +  A+    +M E  + +++ TYN L++ L    R T+  ++L +++       
Sbjct: 227 YCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA-YELVEEMGGKGLAP 285

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+T +I+I+G C++  ++ A+   +  + +    +VV+  A++    K G  +    LF
Sbjct: 286 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 345

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              ++ G+ PD   YN LI+    +G+++ A E   +M +  + PD +TY+ L +G  LL
Sbjct: 346 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 405

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A K+I ++  +G  PD+VTY  LI GY   G+V++ L++R  M+++GF   ++ Y
Sbjct: 406 GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 465

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           + L+  +CK+G+ D+A  ++ EM   G+ PD  TY  LI GL  +D+
Sbjct: 466 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 188/421 (44%), Gaps = 30/421 (7%)

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           L+L   M S    ++  +   LLS++  +     A  L  +M  + L     T++I++R 
Sbjct: 68  LRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRH 123

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-Q 341
           LC   K  +A++L  +M      PN+  +  ++ G C +  +  A      +     I  
Sbjct: 124 LCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 179

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRL 400
           +   Y  +I G+ K+G + EAV+++ +++ K  + P  V +N+LI G+C  GK+  A   
Sbjct: 180 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 239

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            D +   G+  +  TY   ++A   +G       L++EM  K + P   TY ++I G CK
Sbjct: 240 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCK 299

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
           +  +++A+++ E+M   GV    +TY  +I +  K   +++  +L ++     + P    
Sbjct: 300 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 359

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           YN LI+    +G++  A  ++  +++  I+   V Y T+++  C  G V +A     +M 
Sbjct: 360 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 419

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           E+G                      PD      ++  +   GD+     +   M+  G  
Sbjct: 420 ERG--------------------IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 459

Query: 641 P 641
           P
Sbjct: 460 P 460



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 134/303 (44%), Gaps = 21/303 (6%)

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+  +   R+     TFN ++   C  GK A A  LL  +      P+AVTY T + 
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 153

Query: 422 AYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-V 479
            +C  G +Q  L +++EM E   I P   TY  VI G CK  ++ EAV++ ++M   G V
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+ + YN +I  +C    L  A    ++M    +  T ATYN+L+  L ++G    A  
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY-------- 591
           L+  +    ++     Y  +I  HC EG+V KA+  F  M  +G   ++  Y        
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333

Query: 592 -------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                  T   F   +  G  PD  +   ++ +    G++   FE+   M K  + PD  
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 393

Query: 645 LIN 647
             N
Sbjct: 394 TYN 396



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 133/260 (51%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T ++++  L    R  +A   ++E  GK   P V + N +++ +CK G  + A  +F 
Sbjct: 252 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 311

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + G+     +Y  LI+ L   G ++E  +  ++  R G+ PD + Y+ L        
Sbjct: 312 NMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 371

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            I  A++++ ++  K   PD VTY  L+ G C +G V+E  KL + M  +G + +++ Y+
Sbjct: 372 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 431

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+S     G + +AL +  EM   G  P L+TY+ LI+GLCK  +   A  +  EM   
Sbjct: 432 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 491

Query: 303 RISPNSFAHGAILLGLCEKE 322
            I+P+   + +++ GL  ++
Sbjct: 492 GITPDDSTYISLIEGLTTED 511


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 256/523 (48%), Gaps = 3/523 (0%)

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           A L  +    + F    +    +++  CK GF + A+   C +L+ G   D      L+ 
Sbjct: 112 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 171

Query: 142 GLCIAGSMEEALEFTNDMGR-HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
             C    + EA      M +     P+++TYSIL  G     ++  A+++ Q+++ KG  
Sbjct: 172 ANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 231

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P   TYTVLI   C IG  ++ +K+ + M ++    NV  Y++L+  +C+ G+I+EA G+
Sbjct: 232 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 291

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
             +M   GL P ++T++ LI G CK+  V  A QL + M      PN   +  ++ GLC 
Sbjct: 292 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 351

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
                +A +    ++ +  + D V YNI++DG+ K G +  A  ++  +    + P   T
Sbjct: 352 VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFT 411

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM- 439
           F +LI G CK G++  A  +L ++   G+    VT+T  ++ +C+ G  + +  L + M 
Sbjct: 412 FTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMV 471

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
           E + +   H T+   +  L K +KL EA  +L  M   G+ P  +T+  +I   C+  + 
Sbjct: 472 ENRCLTTAH-TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 530

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
             + ++L +M      P   TY I+I+GLC NG ++ A+ +L S+    +S     Y  +
Sbjct: 531 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 590

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
           +KAH   G + +A      MV+ G + +   Y+      +LSN
Sbjct: 591 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 633



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 170/640 (26%), Positives = 292/640 (45%), Gaps = 58/640 (9%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL-LYNLRHTDI--MWDLYDDIKVSETPR-NV 63
           + G V  A     K+  L   +      SL L N R  D+   + +++ +   E+ R N 
Sbjct: 140 KNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNS 199

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T SI+I GLC+  RL++A    QE                                   
Sbjct: 200 VTYSILIHGLCEAGRLEEAFQLKQE----------------------------------- 224

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M++ G  P   +Y +LI   C  G  ++A++  ++M      P+  TY+IL        +
Sbjct: 225 MVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGK 284

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I  A  V +K+L  G  P I+T+  LI GYC+ G V    +L  VM     K N+  Y+ 
Sbjct: 285 IEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNE 344

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +C+  +  +A  LL  +   GL PD VTY+IL+ G CK+ +++ A  ++N M S  
Sbjct: 345 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 404

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P+ F   A++ GLC+   + +A     S++      D V +  +IDG+ K+G   +  
Sbjct: 405 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 464

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L+  ++E R   +  TFN  +    K+ K+ +A  +L  +  +GL PS VT+T  +  +
Sbjct: 465 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 524

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C  G     L +L+ M+     P   TYT++I GLC   +++EA  +L  M   GV+P+ 
Sbjct: 525 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNH 584

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            TY  ++++  K   L +AFQ+++ M  +  +P S  Y+ L+ G  ++     A  L  +
Sbjct: 585 FTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSST 644

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
                 SL+             E D +   +   ++++    + IRD  K   C +    
Sbjct: 645 GDLDARSLSS-----------EENDNNCLSSHVFRLMDVDHALKIRDEIKK--CGV---- 687

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
             P +++   +++   + G +    +L   M+K GL PDK
Sbjct: 688 --PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK 725



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 148/582 (25%), Positives = 268/582 (46%), Gaps = 48/582 (8%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYT 65
            G + +A  +  +M E   + S +TY  L+    ++  TD    + D++       NV+T
Sbjct: 212 AGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHT 271

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            +I+ID LC++ ++++A    ++       P +++ NA+++ YCK G+   A  L  +M 
Sbjct: 272 YTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVME 331

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K    P+  +YN L+ GLC      +A      +  +G+ PD +TY+IL  GF    Q++
Sbjct: 332 KGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLN 391

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A+ +   +   G +PD  T+T LI G C++G +E+   +   M+ +G  L+ + ++ L+
Sbjct: 392 MAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALI 451

Query: 246 SSMCKSGR-----------------------------------IDEALGLLYEMEAVGLK 270
              CK G+                                   ++EA  +L +M   GL 
Sbjct: 452 DGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLV 511

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P +VT++ILI G C+  +   ++++   M     SPN + +  I+ GLC    + EA   
Sbjct: 512 PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 571

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
             S+       +   Y +++  +VK G +  A Q+   +++    P+   +++L+ GF  
Sbjct: 572 LFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVL 631

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL----ALLQEMETKAIG- 445
           +     AR L  T  L     S+       +  C   ++ RL+    AL    E K  G 
Sbjct: 632 SNTAIGARALSSTGDLDARSLSSEEN----DNNCLSSHVFRLMDVDHALKIRDEIKKCGV 687

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           PT   Y  ++ GLCK+ ++ EA QL +DM   G+ PD+   ++II  +CK        + 
Sbjct: 688 PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEF 746

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           +  +  +   P+ A+Y  +I GL   G ++ A  L+  L  H
Sbjct: 747 MKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRH 788



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 178/389 (45%), Gaps = 36/389 (9%)

Query: 229 MLSQGFKLNVIAYSVLL-----------------------------------SSMCKSGR 253
           M   GF+L+   YS LL                                   +++CK+G 
Sbjct: 84  MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 143

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR-ISPNSFAHG 312
           +  A     ++  +G   D    + L+   C++D + +A +++ +M  +    PNS  + 
Sbjct: 144 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYS 203

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++ GLCE   + EA      ++   C      Y ++I     +G   +A+++  ++  K
Sbjct: 204 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 263

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P++ T+  LI   C+ GK+ +A  +   +  HGL P  +T+   +N YC+EG +   
Sbjct: 264 ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSA 323

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             LL  ME     P   TY  +++GLC+  K  +A  LL  +   G+ PD++TYN ++  
Sbjct: 324 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 383

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
           FCK   L  AF + N M    LEP   T+  LIDGLC  G L+ A+ +L S+ +  ISL 
Sbjct: 384 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 443

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           +V +T +I  HC  G        F  MVE
Sbjct: 444 EVTFTALIDGHCKIGKAKDVCFLFENMVE 472



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/506 (24%), Positives = 219/506 (43%), Gaps = 75/506 (14%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR---NVY 64
           R G + +A  V  KM +  L   I T+N+L+        +   +  + V E      N+ 
Sbjct: 281 REGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIR 340

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +++GLC+ S+   A L L+        P  V+ N ++  +CK G   +A  +F  M
Sbjct: 341 TYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 400

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF------ 178
              GL PD F++  LI GLC  G +E+A      M + G+  D +T++ L  G       
Sbjct: 401 NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKA 460

Query: 179 -------------------HLLS----------QISGAWKVIQKLLIKGSDPDIVTYTVL 209
                              H  +          +++ A  ++ K++  G  P +VT+T+L
Sbjct: 461 KDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 520

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G+C+ G     LK+ E M   G   NV  Y+++++ +C +GR++EA  +L+ M + G+
Sbjct: 521 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGV 580

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P+  TY++L++   K  ++ +A Q+ + M      PNS  + A+L G         AR 
Sbjct: 581 SPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARA 640

Query: 330 Y-----FDSLIMS------NCIQDVV-------------------------LYNIMIDGY 353
                  D+  +S      NC+   V                         LYN ++ G 
Sbjct: 641 LSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGL 700

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K G I EA QL + +++  + P     +S+I  +CK  K  +    +  +  +   PS 
Sbjct: 701 CKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSF 759

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEM 439
            +Y   ++    EG +Q    L+ ++
Sbjct: 760 ASYCWVIHGLRNEGRVQEAQKLVSDL 785



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/513 (22%), Positives = 215/513 (41%), Gaps = 81/513 (15%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPR 61
           Y + G V  A  +++ M++ + K +I+TYN L+  L      +     L   +     P 
Sbjct: 314 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPD 373

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V T +I++DG C++ +L  A             P   +  A++   CKLG  E A G+ 
Sbjct: 374 RV-TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGIL 432

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGS--------------------------------- 148
             M+K G+  D  ++  LI G C  G                                  
Sbjct: 433 GSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKD 492

Query: 149 --MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
             + EA      M ++G+ P  +T++IL +G     + + + K+++++   G  P++ TY
Sbjct: 493 YKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTY 552

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T++I G C  G VEE   +   M S G   N   Y+VL+ +  K+GR+D A  ++  M  
Sbjct: 553 TIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK 612

Query: 267 VGLKPDLVTYSILIRGL-------------------------------CKQDKVHK---- 291
            G +P+   YS L+ G                                C    V +    
Sbjct: 613 NGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDV 672

Query: 292 --AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             A+++ +E+  K   P    +  +++GLC++  I EA      ++      D  + +I 
Sbjct: 673 DHALKIRDEI-KKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI- 730

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL-DTIKLHG 408
           I+ Y K       ++  + +++ +  PS  ++  +I+G    G+V +A++L+ D ++  G
Sbjct: 731 IEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTG 790

Query: 409 LEPSA-VTYTTFMNAYCEEGNIQRLLALLQEME 440
           +E    VT +       EE +  + L L++ +E
Sbjct: 791 IEEEVEVTPSIEFLMKEEEDDPDKCLKLIKAIE 823



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 137/299 (45%), Gaps = 16/299 (5%)

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  +YR+++ +      + + +++   CKNG V  A      +   G        T+ + 
Sbjct: 112 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 171

Query: 422 AYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           A C   ++     + ++M + ++  P  VTY+++I GLC+  +L+EA QL ++M   G  
Sbjct: 172 ANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 231

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P   TY  +I++ C      KA ++L++M      P   TY ILID LC  G ++ A+ +
Sbjct: 232 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 291

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY--------- 591
              + +H +    + +  +I  +C EG V  A      M +   + +IR Y         
Sbjct: 292 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 351

Query: 592 -TKSFFCMML-----SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
            +KS+   +L      NG  PD+    +++  F + G L   F +   M  +GL PD F
Sbjct: 352 VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 410


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 247/469 (52%), Gaps = 11/469 (2%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           + +YG+ P   + N ++  L     ++EA+E   ++    V     +Y+IL K      +
Sbjct: 223 LRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHKNV----CSYNILLKALCDAGR 274

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A ++  ++    S PD+VTY +LI G+C +G +E  +KL + M++ G + N   Y+ 
Sbjct: 275 VKDARQLFDEM---ASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTS 331

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +++ +C  G I +AL ++ +M    +  D   Y+ ++ G C +  +  A + ++EM  K 
Sbjct: 332 VVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKG 391

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++ +   +  ++ GLC    + EA      +       D V Y ++IDGY K G + EA 
Sbjct: 392 LATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAF 451

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           Q++  ++++ ++P++VT+ +L  G CK G V  A  LL  +   GLE +A TY + +N  
Sbjct: 452 QMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGL 511

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ G +++ +  + +M+T  + P   TYT +I  LCK   L  A  LL++M   G+ P  
Sbjct: 512 CKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTI 571

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TYN ++  FC    +    +LL+ M   N+ P +ATYN L+   C+  ++K+   +   
Sbjct: 572 VTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKG 631

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           ++  ++   +  Y  +IK HC   ++ +A+ F  +M++KGF ++   Y+
Sbjct: 632 MRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYS 680



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 150/509 (29%), Positives = 261/509 (51%), Gaps = 8/509 (1%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
           ++ ++++  +  S +  N++L  L   D   +L+ ++      +NV + +I++  LC   
Sbjct: 219 LLRRLRQYGISPSPEACNAVLSRLP-LDEAIELFQELPH----KNVCSYNILLKALCDAG 273

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           R++DA     E A     P VV+   ++  +C LG  E A  L   M+  G+ P+A  Y 
Sbjct: 274 RVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYT 330

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
            ++  LC  G + +AL    DM +  V  D   Y+ +  GF     +  A +   ++  K
Sbjct: 331 SVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRK 390

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G   D VTYT +I G C+   +EE  KL + M ++   ++ + Y+VL+   CK G++ EA
Sbjct: 391 GLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEA 450

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             +   M   G+ P++VTY+ L  GLCKQ  V  A +L +EM +K +  N+  + +++ G
Sbjct: 451 FQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLING 510

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC+   + +A      +  +    DV  Y  +ID   K G++  A  L +++++K I P+
Sbjct: 511 LCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPT 570

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           IVT+N L+ GFC +G+V   ++LLD +    + P+A TY + M  YC E N++    + +
Sbjct: 571 IVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYK 630

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            M ++ +GP   TY ++IKG CK   ++EA+   ++M   G      +Y+ +IR   K K
Sbjct: 631 GMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKK 690

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILID 526
              +A +L + M    L   S  Y+  ID
Sbjct: 691 KFVEARELFHDMRKEGLTAESDVYDFYID 719



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 256/495 (51%), Gaps = 13/495 (2%)

Query: 92  KEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
           +++G  PS  + NA++SR   L   E  +     + +   H +  SYNIL+  LC AG +
Sbjct: 224 RQYGISPSPEACNAVLSR---LPLDEAIE-----LFQELPHKNVCSYNILLKALCDAGRV 275

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           ++A +  ++M      PD +TY IL  G   L ++  A K++ +++  G +P+   YT +
Sbjct: 276 KDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSV 332

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           +   C  G + + L++ E M+ +   L+   Y+ +LS  C  G +  A     EM+  GL
Sbjct: 333 VALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGL 392

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
             D VTY+ +I GLC+  ++ +A +L  EM ++R+  +   +  ++ G C++  + EA  
Sbjct: 393 ATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQ 452

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             ++++      +VV Y  + DG  K G++  A +L  ++  K +  +  T+NSLI G C
Sbjct: 453 MHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLC 512

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K G +  A R +  +    L+P   TYTT ++A C+ G++ R  +LLQEM  K I PT V
Sbjct: 513 KAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIV 572

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY V++ G C   +++   +LL+ M    + P+  TYN++++ +C   +++   ++   M
Sbjct: 573 TYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGM 632

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
              ++ P   TYNILI G C   ++K A      + +    LT  +Y+ +I+    +   
Sbjct: 633 RSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKF 692

Query: 570 HKAMTFFCQMVEKGF 584
            +A   F  M ++G 
Sbjct: 693 VEARELFHDMRKEGL 707



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 207/423 (48%), Gaps = 39/423 (9%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E    VYT+ + +  LC +  + DA+  +++   ++          ++S +C  G    A
Sbjct: 323 EPNATVYTSVVAL--LCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSA 380

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           +  F  M + GL  D  +Y  +I+GLC A  +EEA +   +M    ++ D +TY++L  G
Sbjct: 381 RRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDG 440

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +    +++ A+++   ++ +G  P++VTYT L  G C+ G+V+   +L   M ++G +LN
Sbjct: 441 YCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELN 500

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              Y+ L++ +CK+G +++A+  + +M+   LKPD+ TY+ LI  LCK   + +A  L  
Sbjct: 501 ACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQ 560

Query: 298 EMCSKRISPNSFAHGAILLGLC----------------EKEMITEARMYFDSLIMSNCIQ 341
           EM  K I P    +  ++ G C                EK +   A  Y +SL+   CI+
Sbjct: 561 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATY-NSLMKQYCIE 619

Query: 342 DVV--------------------LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
           + +                     YNI+I G+ K  N+ EA+  + ++I+K    +  ++
Sbjct: 620 NNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSY 679

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           ++LI    K  K  +AR L   ++  GL   +  Y  +++    E N++  LAL  E+  
Sbjct: 680 SALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVE 739

Query: 442 KAI 444
            +I
Sbjct: 740 ASI 742



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 179/382 (46%), Gaps = 31/382 (8%)

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           LL  +   G+ P     + ++  L     + +AI+L+ E+  K    N  ++  +L  LC
Sbjct: 219 LLRRLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHK----NVCSYNILLKALC 270

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           +   + +AR  FD +  +    DVV Y I+I G+  LG +  AV+L  +++   + P+  
Sbjct: 271 DAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNAT 327

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
            + S++   C  G ++DA R+++ +    +      YTT ++ +C +G++        EM
Sbjct: 328 VYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEM 387

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
           + K +    VTYT +I GLC+  +L+EA +LL++M+   +  D++TY  +I  +CK   +
Sbjct: 388 QRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKM 447

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
            +AFQ+ N M    + P   TY  L DGLC  GD++ A+ LL  +    + L    Y ++
Sbjct: 448 AEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 507

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
           I   C  G + +AM     M     +  +  YT                     ++ A  
Sbjct: 508 INGLCKAGYLEQAMRTMADMDTACLKPDVYTYT--------------------TLIDALC 547

Query: 620 QGGDLGSVFELAAVMIKSGLLP 641
           + GDL     L   M+  G+ P
Sbjct: 548 KSGDLDRAHSLLQEMLDKGIKP 569



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 170/370 (45%), Gaps = 13/370 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           R G+  D V     +  L   V ++    LL        MW    D+       +  T +
Sbjct: 389 RKGLATDGVTYTTMINGLCRAVELEEAEKLLQE------MWARRLDV-------DEVTYT 435

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++IDG C++ ++ +A         +   P+VV+  A+    CK G  + A  L   M   
Sbjct: 436 VLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNK 495

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           GL  +A +YN LI+GLC AG +E+A+    DM    ++PD  TY+ L         +  A
Sbjct: 496 GLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRA 555

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             ++Q++L KG  P IVTY VL+ G+C  G VE G KL + ML +    N   Y+ L+  
Sbjct: 556 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQ 615

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            C    +     +   M +  + P+  TY+ILI+G CK   + +A+  ++EM  K     
Sbjct: 616 YCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLT 675

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           + ++ A++  L +K+   EAR  F  +       +  +Y+  ID      N+   + L  
Sbjct: 676 ATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCD 735

Query: 368 QLIEKRISPS 377
           +L+E  I  S
Sbjct: 736 ELVEASIVKS 745


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 130/395 (32%), Positives = 220/395 (55%), Gaps = 6/395 (1%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
             + N ++   C  G  + A+ L   +L+    P+A +YN +I G C  G ++ AL+   
Sbjct: 488 TTTFNIMLRHLCSAG--KPARALE--LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMR 543

Query: 158 DMG-RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQ 215
           +M  R G+ P+  TY  +  G+  + ++  A KV  ++L KG   P+ V Y  LI GYC 
Sbjct: 544 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 603

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G ++  L  R+ M+ +G  + V  Y++L+ ++   GR  EA  L+ EM   GL PD+ T
Sbjct: 604 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 663

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ILI G CK+  V KA++++  M  + +      + A++  L +K  + E    FD  +
Sbjct: 664 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 723

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D+VLYN +I+ +   GNI  A ++  ++ +KRI+P  VT+N+L+ G C  G+V 
Sbjct: 724 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 783

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +AR+L+D +   G++P  VTY T ++ Y  +G+++  L +  EM  K   PT +TY  +I
Sbjct: 784 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 843

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           +GLCK  +  +A  ++++M   G+TPD  TY ++I
Sbjct: 844 QGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 878



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 226/474 (47%), Gaps = 45/474 (9%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           S  SL+ ++S       +  A  LF  M +  L     ++NI++  LC AG    ALE  
Sbjct: 456 STASLHPLLSALP----SAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELL 511

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
             M R                                       P+ VTY  +I G+C  
Sbjct: 512 RQMPR---------------------------------------PNAVTYNTVIAGFCSR 532

Query: 217 GNVEEGLK-LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG-LKPDLV 274
           G V+  L  +RE+    G   N   Y  ++S  CK GR+DEA+ +  EM   G +KP+ V
Sbjct: 533 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV 592

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
            Y+ LI G C Q K+  A+   + M  + ++     +  ++  L      TEA    + +
Sbjct: 593 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 652

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                  DV  YNI+I+G+ K GN+ +A++++  +  + +  ++VT+ +LIY   K G+V
Sbjct: 653 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 712

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +  +L D     G+ P  V Y   +N++   GNI R   ++ EME K I P  VTY  +
Sbjct: 713 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 772

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           ++GLC   ++ EA +L+++M   G+ PD +TYNT+I  +    D++ A ++ N+M     
Sbjct: 773 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 832

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
            PT  TYN LI GLC NG   +A+ ++  + E+ I+     Y ++I+    E +
Sbjct: 833 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 221/416 (53%), Gaps = 7/416 (1%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           A  + A M  L L +   T+N +L +L          + ++    P N  T + VI G C
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRP-NAVTYNTVIAGFC 530

Query: 75  QQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LH 130
            + R+Q A+  ++E   +E G   P+  +   ++S +CK+G  + A  +F  ML  G + 
Sbjct: 531 SRGRVQAALDIMREM--RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK 588

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+A  YN LI G C  G ++ AL + + M   GV     TY++L     +  + + A+++
Sbjct: 589 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 648

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++++  KG  PD+ TY +LI G+C+ GNV++ L++ E M  +G +  V+ Y+ L+ ++ K
Sbjct: 649 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 708

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++ E   L  E    G++PDLV Y+ LI        + +A ++  EM  KRI+P+   
Sbjct: 709 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 768

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ GLC    + EAR   D +       D+V YN +I GY   G++ +A+++  +++
Sbjct: 769 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 828

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            K  +P+++T+N+LI G CKNG+  DA  ++  +  +G+ P   TY + +     E
Sbjct: 829 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 884



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 207/397 (52%), Gaps = 23/397 (5%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M      L    ++++L  +C +G+   AL LL +M     +P+ VTY+ +I G C + +
Sbjct: 479 MFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGR 534

Query: 289 VHKAIQLYNEMCSKR-ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLY 346
           V  A+ +  EM  +  I+PN + +G ++ G C+   + EA   FD ++    ++ + V+Y
Sbjct: 535 VQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY 594

Query: 347 NIMIDGYVKLGNIGEAVQLYR-QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           N +I GY   G +  A+ LYR +++E+ ++ ++ T+N L++    +G+  +A  L++ + 
Sbjct: 595 NALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 653

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             GL P   TY   +N +C+EGN+++ L + + M  + +  T VTYT +I  L K+ ++Q
Sbjct: 654 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 713

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           E  +L ++    G+ PD + YN +I S     ++ +AF+++ +M    + P   TYN L+
Sbjct: 714 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 773

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            GLC+ G +  A  L+  + E  I    V Y T+I  +  +GDV  A+    +M+ KGF 
Sbjct: 774 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 833

Query: 586 ISIRDYT---------------KSFFCMMLSNGFPPD 607
            ++  Y                ++    M+ NG  PD
Sbjct: 834 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 870



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 189/382 (49%), Gaps = 6/382 (1%)

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
            T+ +++   C  G     L+L    L Q  + N + Y+ +++  C  GR+  AL ++ E
Sbjct: 489 TTFNIMLRHLCSAGKPARALEL----LRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMRE 544

Query: 264 M-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK-RISPNSFAHGAILLGLCEK 321
           M E  G+ P+  TY  +I G CK  +V +A+++++EM +K  + P +  + A++ G C++
Sbjct: 545 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 604

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             +  A +Y D ++       V  YN+++      G   EA +L  ++  K ++P + T+
Sbjct: 605 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 664

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N LI G CK G V  A  + + +   G+  + VTYT  + A  ++G +Q    L  E   
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           + I P  V Y  +I        +  A +++ +M    + PD +TYNT++R  C    + +
Sbjct: 725 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 784

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A +L+++M    ++P   TYN LI G  + GD+K+A  +   +     + T + Y  +I+
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844

Query: 562 AHCAEGDVHKAMTFFCQMVEKG 583
             C  G    A     +MVE G
Sbjct: 845 GLCKNGQGDDAENMVKEMVENG 866



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 160/287 (55%), Gaps = 5/287 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y   G +  A+    +M E  + +++ TYN L++ L    R T+  ++L +++       
Sbjct: 601 YCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE-AYELVEEMGGKGLAP 659

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+T +I+I+G C++  ++ A+   +  + +    +VV+  A++    K G  +    LF
Sbjct: 660 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 719

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              ++ G+ PD   YN LI+    +G+++ A E   +M +  + PD +TY+ L +G  LL
Sbjct: 720 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 779

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A K+I ++  +G  PD+VTY  LI GY   G+V++ L++R  M+++GF   ++ Y
Sbjct: 780 GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 839

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           + L+  +CK+G+ D+A  ++ EM   G+ PD  TY  LI GL  +D+
Sbjct: 840 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 188/421 (44%), Gaps = 30/421 (7%)

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           L+L   M S    ++  +   LLS++  +     A  L  +M  + L     T++I++R 
Sbjct: 442 LRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRH 497

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-Q 341
           LC   K  +A++L  +M      PN+  +  ++ G C +  +  A      +     I  
Sbjct: 498 LCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 553

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRL 400
           +   Y  +I G+ K+G + EAV+++ +++ K  + P  V +N+LI G+C  GK+  A   
Sbjct: 554 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 613

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            D +   G+  +  TY   ++A   +G       L++EM  K + P   TY ++I G CK
Sbjct: 614 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCK 673

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
           +  +++A+++ E+M   GV    +TY  +I +  K   +++  +L ++     + P    
Sbjct: 674 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 733

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           YN LI+    +G++  A  ++  +++  I+   V Y T+++  C  G V +A     +M 
Sbjct: 734 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 793

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           E+G                      PD      ++  +   GD+     +   M+  G  
Sbjct: 794 ERG--------------------IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 833

Query: 641 P 641
           P
Sbjct: 834 P 834



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 134/303 (44%), Gaps = 21/303 (6%)

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+  +   R+     TFN ++   C  GK A A  LL  +      P+AVTY T + 
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 527

Query: 422 AYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-V 479
            +C  G +Q  L +++EM E   I P   TY  VI G CK  ++ EAV++ ++M   G V
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+ + YN +I  +C    L  A    ++M    +  T ATYN+L+  L ++G    A  
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY-------- 591
           L+  +    ++     Y  +I  HC EG+V KA+  F  M  +G   ++  Y        
Sbjct: 648 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 707

Query: 592 -------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                  T   F   +  G  PD  +   ++ +    G++   FE+   M K  + PD  
Sbjct: 708 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 767

Query: 645 LIN 647
             N
Sbjct: 768 TYN 770



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 133/260 (51%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T ++++  L    R  +A   ++E  GK   P V + N +++ +CK G  + A  +F 
Sbjct: 626 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 685

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + G+     +Y  LI+ L   G ++E  +  ++  R G+ PD + Y+ L        
Sbjct: 686 NMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 745

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            I  A++++ ++  K   PD VTY  L+ G C +G V+E  KL + M  +G + +++ Y+
Sbjct: 746 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 805

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+S     G + +AL +  EM   G  P L+TY+ LI+GLCK  +   A  +  EM   
Sbjct: 806 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 865

Query: 303 RISPNSFAHGAILLGLCEKE 322
            I+P+   + +++ GL  ++
Sbjct: 866 GITPDDSTYISLIEGLTTED 885


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 256/523 (48%), Gaps = 3/523 (0%)

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           A L  +    + F    +    +++  CK GF + A+   C +L+ G   D      L+ 
Sbjct: 155 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 214

Query: 142 GLCIAGSMEEALEFTNDMGR-HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
             C    + EA      M +     P+++TYSIL  G     ++  A+++ Q+++ KG  
Sbjct: 215 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 274

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P   TYTVLI   C IG  ++ +K+ + M ++    NV  Y++L+  +C+ G+I+EA G+
Sbjct: 275 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 334

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
             +M   GL P ++T++ LI G CK+  V  A QL + M      PN   +  ++ GLC 
Sbjct: 335 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 394

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
                +A +    ++ +  + D V YNI++DG+ K G +  A  ++  +    + P   T
Sbjct: 395 VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFT 454

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM- 439
           F +LI G CK G++  A  +L ++   G+    VT+T  ++ +C+ G  + +  L + M 
Sbjct: 455 FTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMV 514

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
           E + +   H T+   +  L K +KL EA  +L  M   G+ P  +T+  +I   C+  + 
Sbjct: 515 ENRCLTTAH-TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 573

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
             + ++L +M      P   TY I+I+GLC NG ++ A+ +L S+    +S     Y  +
Sbjct: 574 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 633

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
           +KAH   G + +A      MV+ G + +   Y+      +LSN
Sbjct: 634 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 676



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 170/640 (26%), Positives = 291/640 (45%), Gaps = 58/640 (9%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL-LYNLRHTDI--MWDLYDDIKVSETPR-NV 63
           + G V  A     K+  L   +      SL L N R  D+   + +++ +   E  R N 
Sbjct: 183 KNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNS 242

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T SI+I GLC+  RL++A    QE                                   
Sbjct: 243 VTYSILIHGLCEAGRLEEAFQLKQE----------------------------------- 267

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M++ G  P   +Y +LI   C  G  ++A++  ++M      P+  TY+IL        +
Sbjct: 268 MVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGK 327

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I  A  V +K+L  G  P I+T+  LI GYC+ G V    +L  VM     K N+  Y+ 
Sbjct: 328 IEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNE 387

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +C+  +  +A  LL  +   GL PD VTY+IL+ G CK+ +++ A  ++N M S  
Sbjct: 388 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAG 447

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P+ F   A++ GLC+   + +A     S++      D V +  +IDG+ K+G   +  
Sbjct: 448 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 507

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L+  ++E R   +  TFN  +    K+ K+ +A  +L  +  +GL PS VT+T  +  +
Sbjct: 508 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 567

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C  G     L +L+ M+     P   TYT++I GLC   +++EA  +L  M   GV+P+ 
Sbjct: 568 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNH 627

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            TY  ++++  K   L +AFQ+++ M  +  +P S  Y+ L+ G  ++     A  L  +
Sbjct: 628 FTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSST 687

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
                 SL+             E D +   +   ++++    + IRD  K   C +    
Sbjct: 688 GDLDARSLSS-----------EENDNNCLSSHVFRLMDVDHALKIRDEIKK--CGV---- 730

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
             P +++   +++   + G +    +L   M+K GL PDK
Sbjct: 731 --PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK 768



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 148/582 (25%), Positives = 268/582 (46%), Gaps = 48/582 (8%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYT 65
            G + +A  +  +M E   + S +TY  L+    ++  TD    + D++       NV+T
Sbjct: 255 AGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHT 314

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            +I+ID LC++ ++++A    ++       P +++ NA+++ YCK G+   A  L  +M 
Sbjct: 315 YTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVME 374

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K    P+  +YN L+ GLC      +A      +  +G+ PD +TY+IL  GF    Q++
Sbjct: 375 KGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLN 434

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A+ +   +   G +PD  T+T LI G C++G +E+   +   M+ +G  L+ + ++ L+
Sbjct: 435 MAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALI 494

Query: 246 SSMCKSGR-----------------------------------IDEALGLLYEMEAVGLK 270
              CK G+                                   ++EA  +L +M   GL 
Sbjct: 495 DGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLV 554

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P +VT++ILI G C+  +   ++++   M     SPN + +  I+ GLC    + EA   
Sbjct: 555 PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 614

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
             S+       +   Y +++  +VK G +  A Q+   +++    P+   +++L+ GF  
Sbjct: 615 LFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVL 674

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL----ALLQEMETKAIG- 445
           +     AR L  T  L     S+       +  C   ++ RL+    AL    E K  G 
Sbjct: 675 SNTAIGARALSSTGDLDARSLSSEEN----DNNCLSSHVFRLMDVDHALKIRDEIKKCGV 730

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           PT   Y  ++ GLCK+ ++ EA QL +DM   G+ PD+   ++II  +CK        + 
Sbjct: 731 PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEF 789

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           +  +  +   P+ A+Y  +I GL   G ++ A  L+  L  H
Sbjct: 790 MKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRH 831



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 178/389 (45%), Gaps = 36/389 (9%)

Query: 229 MLSQGFKLNVIAYSVLL-----------------------------------SSMCKSGR 253
           M   GF+L+   YS LL                                   +++CK+G 
Sbjct: 127 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 186

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR-ISPNSFAHG 312
           +  A     ++  +G   D    + L+   C++D + +A +++ +M  +    PNS  + 
Sbjct: 187 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYS 246

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++ GLCE   + EA      ++   C      Y ++I     +G   +A+++  ++  K
Sbjct: 247 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 306

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P++ T+  LI   C+ GK+ +A  +   +  HGL P  +T+   +N YC+EG +   
Sbjct: 307 ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSA 366

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             LL  ME     P   TY  +++GLC+  K  +A  LL  +   G+ PD++TYN ++  
Sbjct: 367 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 426

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
           FCK   L  AF + N M    LEP   T+  LIDGLC  G L+ A+ +L S+ +  ISL 
Sbjct: 427 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 486

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           +V +T +I  HC  G        F  MVE
Sbjct: 487 EVTFTALIDGHCKIGKAKDVCFLFENMVE 515



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/506 (24%), Positives = 219/506 (43%), Gaps = 75/506 (14%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR---NVY 64
           R G + +A  V  KM +  L   I T+N+L+        +   +  + V E      N+ 
Sbjct: 324 REGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIR 383

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +++GLC+ S+   A L L+        P  V+ N ++  +CK G   +A  +F  M
Sbjct: 384 TYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 443

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF------ 178
              GL PD F++  LI GLC  G +E+A      M + G+  D +T++ L  G       
Sbjct: 444 NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKA 503

Query: 179 -------------------HLLS----------QISGAWKVIQKLLIKGSDPDIVTYTVL 209
                              H  +          +++ A  ++ K++  G  P +VT+T+L
Sbjct: 504 KDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 563

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G+C+ G     LK+ E M   G   NV  Y+++++ +C +GR++EA  +L+ M + G+
Sbjct: 564 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGV 623

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P+  TY++L++   K  ++ +A Q+ + M      PNS  + A+L G         AR 
Sbjct: 624 SPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARA 683

Query: 330 Y-----FDSLIMS------NCIQDVV-------------------------LYNIMIDGY 353
                  D+  +S      NC+   V                         LYN ++ G 
Sbjct: 684 LSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGL 743

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K G I EA QL + +++  + P     +S+I  +CK  K  +    +  +  +   PS 
Sbjct: 744 CKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSF 802

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEM 439
            +Y   ++    EG +Q    L+ ++
Sbjct: 803 ASYCWVIHGLRNEGRVQEAQKLVSDL 828



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/513 (22%), Positives = 215/513 (41%), Gaps = 81/513 (15%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPR 61
           Y + G V  A  +++ M++ + K +I+TYN L+  L      +     L   +     P 
Sbjct: 357 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPD 416

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V T +I++DG C++ +L  A             P   +  A++   CKLG  E A G+ 
Sbjct: 417 RV-TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGIL 475

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGS--------------------------------- 148
             M+K G+  D  ++  LI G C  G                                  
Sbjct: 476 GSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKD 535

Query: 149 --MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
             + EA      M ++G+ P  +T++IL +G     + + + K+++++   G  P++ TY
Sbjct: 536 YKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTY 595

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T++I G C  G VEE   +   M S G   N   Y+VL+ +  K+GR+D A  ++  M  
Sbjct: 596 TIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK 655

Query: 267 VGLKPDLVTYSILIRGL-------------------------------CKQDKVHK---- 291
            G +P+   YS L+ G                                C    V +    
Sbjct: 656 NGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDV 715

Query: 292 --AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             A+++ +E+  K   P    +  +++GLC++  I EA      ++      D  + +I 
Sbjct: 716 DHALKIRDEI-KKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI- 773

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL-DTIKLHG 408
           I+ Y K       ++  + +++ +  PS  ++  +I+G    G+V +A++L+ D ++  G
Sbjct: 774 IEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTG 833

Query: 409 LEPSA-VTYTTFMNAYCEEGNIQRLLALLQEME 440
           +E    VT +       EE +  + L L++ +E
Sbjct: 834 IEEEVEVTPSIEFLMKEEEDDPDKCLKLIKAIE 866



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 16/299 (5%)

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  +YR+++ +      + + +++   CKNG V  A      +   G        T+ + 
Sbjct: 155 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 214

Query: 422 AYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           A C   ++     + ++M + +   P  VTY+++I GLC+  +L+EA QL ++M   G  
Sbjct: 215 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 274

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P   TY  +I++ C      KA ++L++M      P   TY ILID LC  G ++ A+ +
Sbjct: 275 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 334

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY--------- 591
              + +H +    + +  +I  +C EG V  A      M +   + +IR Y         
Sbjct: 335 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 394

Query: 592 -TKSFFCMML-----SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
            +KS+   +L      NG  PD+    +++  F + G L   F +   M  +GL PD F
Sbjct: 395 VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 453


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 146/531 (27%), Positives = 255/531 (48%), Gaps = 9/531 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLK-VSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETP 60
            ++R G    A+    +  +L  +   ++ YN LL  L   +++     +YD+++ +   
Sbjct: 95  AFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVD 154

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            NVYT +++I  LCQ  R+  A   L E + K   P  VS   I+S  CKLG  E A+G 
Sbjct: 155 PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGF 214

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
               +     P   SYN ++H LC    M E     N+M + G++P+ +TY+ +   F  
Sbjct: 215 LAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCK 269

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             ++  A  ++ +++  G  P+++T+T L+ G+ + G V + L +   M+ +G+  + I+
Sbjct: 270 ARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTIS 329

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+VL+  +C  G +  AL     M+   L P+  TYS L+ G      +  A+ ++NEM 
Sbjct: 330 YNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMK 389

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           S    PN   +  ++  LC+K M  +A    D ++M NC  + V +N +I      G +G
Sbjct: 390 SSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVG 449

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A+ ++  +      P+  T+N L++G  + G   DA  ++  +  +G E S VTY T +
Sbjct: 450 RALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVI 509

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N  C+    +  + LL  M  + I P   T+  +I   CK+ K+  A  LL  M  +   
Sbjct: 510 NCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCP 569

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            + + Y  +I   C    L  A   L +M    + P  AT+N+L+  +  N
Sbjct: 570 RNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 620



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 230/460 (50%), Gaps = 5/460 (1%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M K G+ P+ ++YN+LI  LC    ++ A +  ++M R G  PD +++  +  G   L +
Sbjct: 148 MRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGR 207

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A   + + +     P   +Y  ++   C    + E   +   M+ +G + NV+ Y+ 
Sbjct: 208 VEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTT 262

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ + CK+  +  A  +L  M ++G  P+++T++ L++G  +  KVH A+ +++ M  + 
Sbjct: 263 IVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG 322

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +P++ ++  ++ GLC    +  A  +F+S+  +  + +   Y+ ++DG+   G++  A+
Sbjct: 323 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAM 382

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            ++ ++      P++V + ++I   CK      A  L+D + +    P+ VT+ T +   
Sbjct: 383 LIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRL 442

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ G + R L +   M      P   TY  ++ GL ++   ++A  ++ +M   G     
Sbjct: 443 CDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSL 502

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TYNT+I   C+    + A  LL +M +  ++P + T+N +I   C  G +  A CLL  
Sbjct: 503 VTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQ 562

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +   N     VAYT +I   C +G +  AM +  +M+ +G
Sbjct: 563 MNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEG 602



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 217/443 (48%), Gaps = 10/443 (2%)

Query: 146 AGSMEEALEF---TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           AGS + AL+     +D+G    +P    Y+ L       + +     V   +   G DP+
Sbjct: 99  AGSADRALKTFYRASDLGCR--DPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPN 156

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           + TY +LI   CQ   V+   K+ + M  +G   + +++  ++S MCK GR++EA G L 
Sbjct: 157 VYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLA 216

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           E       P   +Y+ ++  LC + ++ +   + NEM  + + PN   +  I+   C+  
Sbjct: 217 ET-----VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKAR 271

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            +  A      ++   C  +V+ +  ++ G+ + G + +A+ ++  ++++  +PS +++N
Sbjct: 272 ELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYN 331

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
            LI G C  G +  A    +++K + L P+A TY+T ++ +   G++   + +  EM++ 
Sbjct: 332 VLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSS 391

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
              P  V YT +I  LCK+    +A  L++ M +    P+ +T+NT+I   C C  + +A
Sbjct: 392 GCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRA 451

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
             + + M  +   P   TYN L+ GL   G+ K+A  +++ +  +   L+ V Y T+I  
Sbjct: 452 LNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINC 511

Query: 563 HCAEGDVHKAMTFFCQMVEKGFE 585
            C       AM    +M+ +G +
Sbjct: 512 LCQMCMRKHAMLLLGRMMVQGIQ 534



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 155/355 (43%), Gaps = 55/355 (15%)

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           V +YN ++D  ++   +G  V +Y  + +  + P++ T+N LI   C+N +V  AR++LD
Sbjct: 122 VRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLD 181

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G  P  V++ T ++  C+ G ++     L E       P   +Y  V+  LC ++
Sbjct: 182 EMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEF 236

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM------------- 509
           ++ E   ++ +M   G+ P+ +TY TI+ +FCK ++LR A  +L +M             
Sbjct: 237 RMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFT 296

Query: 510 --------------------WL--HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
                               W+      P++ +YN+LI GLC  GDLK A     S++ +
Sbjct: 297 ALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRN 356

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT--------------- 592
            +      Y+T++      GD+  AM  + +M   G + ++  YT               
Sbjct: 357 ALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQA 416

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +S    ML +  PP+      ++      G +G    +   M ++G  P+    N
Sbjct: 417 ESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYN 471


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 255/530 (48%), Gaps = 9/530 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLK-VSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPR 61
           ++R G    A+    +  +L  +   ++ YN LL  L   +++     +YD+++ +    
Sbjct: 43  FARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDP 102

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NVYT +++I  LCQ  R+  A   L E + K   P  VS   I+S  CKLG  E A+G  
Sbjct: 103 NVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL 162

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              +     P   SYN ++H LC    M E     N+M + G++P+ +TY+ +   F   
Sbjct: 163 AETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKA 217

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  ++ +++  G  P+++T+T L+ G+ + G V + L +   M+ +G+  + I+Y
Sbjct: 218 RELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISY 277

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+  +C  G +  AL     M+   L P+  TYS L+ G      +  A+ ++NEM S
Sbjct: 278 NVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKS 337

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               PN   +  ++  LC+K M  +A    D ++M NC  + V +N +I      G +G 
Sbjct: 338 SGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGR 397

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ ++  +      P+  T+N L++G  + G   DA  ++  +  +G E S VTY T +N
Sbjct: 398 ALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVIN 457

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+    +  + LL  M  + I P   T+  +I   CK+ K+  A  LL  M  +    
Sbjct: 458 CLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPR 517

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
           + + Y  +I   C    L  A   L +M    + P  AT+N+L+  +  N
Sbjct: 518 NVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 567



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 230/460 (50%), Gaps = 5/460 (1%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M K G+ P+ ++YN+LI  LC    ++ A +  ++M R G  PD +++  +  G   L +
Sbjct: 95  MRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGR 154

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A   + + +     P   +Y  ++   C    + E   +   M+ +G + NV+ Y+ 
Sbjct: 155 VEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTT 209

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ + CK+  +  A  +L  M ++G  P+++T++ L++G  +  KVH A+ +++ M  + 
Sbjct: 210 IVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG 269

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +P++ ++  ++ GLC    +  A  +F+S+  +  + +   Y+ ++DG+   G++  A+
Sbjct: 270 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAM 329

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            ++ ++      P++V + ++I   CK      A  L+D + +    P+ VT+ T +   
Sbjct: 330 LIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRL 389

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ G + R L +   M      P   TY  ++ GL ++   ++A  ++ +M   G     
Sbjct: 390 CDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSL 449

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TYNT+I   C+    + A  LL +M +  ++P + T+N +I   C  G +  A CLL  
Sbjct: 450 VTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQ 509

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +   N     VAYT +I   C +G +  AM +  +M+ +G
Sbjct: 510 MNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEG 549



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 217/443 (48%), Gaps = 10/443 (2%)

Query: 146 AGSMEEALEF---TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           AGS + AL+     +D+G    +P    Y+ L       + +     V   +   G DP+
Sbjct: 46  AGSADRALKTFYRASDLGCR--DPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPN 103

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           + TY +LI   CQ   V+   K+ + M  +G   + +++  ++S MCK GR++EA G L 
Sbjct: 104 VYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLA 163

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           E       P   +Y+ ++  LC + ++ +   + NEM  + + PN   +  I+   C+  
Sbjct: 164 ET-----VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKAR 218

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            +  A      ++   C  +V+ +  ++ G+ + G + +A+ ++  ++++  +PS +++N
Sbjct: 219 ELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYN 278

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
            LI G C  G +  A    +++K + L P+A TY+T ++ +   G++   + +  EM++ 
Sbjct: 279 VLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSS 338

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
              P  V YT +I  LCK+    +A  L++ M +    P+ +T+NT+I   C C  + +A
Sbjct: 339 GCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRA 398

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
             + + M  +   P   TYN L+ GL   G+ K+A  +++ +  +   L+ V Y T+I  
Sbjct: 399 LNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINC 458

Query: 563 HCAEGDVHKAMTFFCQMVEKGFE 585
            C       AM    +M+ +G +
Sbjct: 459 LCQMCMRKHAMLLLGRMMVQGIQ 481



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/455 (22%), Positives = 201/455 (44%), Gaps = 31/455 (6%)

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
           + G      + G    +Q++ ++G           I  + + G+ +  LK        G 
Sbjct: 5   SGGLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGC 64

Query: 235 K-LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
           +   V  Y+ LL ++ +   +   + +   M   G+ P++ TY++LIR LC+ D+V  A 
Sbjct: 65  RDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAAR 124

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY----------FDSLIMSNCIQ-- 341
           ++ +EM  K   P+  +HG I+ G+C+   + EAR +          +++++ + C +  
Sbjct: 125 KMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFR 184

Query: 342 ------------------DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
                             +VV Y  ++D + K   +  A  +  +++    +P+++TF +
Sbjct: 185 MWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTA 244

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L+ GF ++GKV DA  +   +   G  PS ++Y   +   C  G+++  L     M+  A
Sbjct: 245 LVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNA 304

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           + P   TY+ ++ G      L  A+ +  +M   G  P+ + Y  +I   CK     +A 
Sbjct: 305 LLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAE 364

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L+++M + N  P + T+N LI  LC  G +  A  +   ++ +        Y  ++   
Sbjct: 365 SLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGL 424

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
             EG+   A     +M+  GFE+S+  Y     C+
Sbjct: 425 FREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCL 459



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 155/355 (43%), Gaps = 55/355 (15%)

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           V +YN ++D  ++   +G  V +Y  + +  + P++ T+N LI   C+N +V  AR++LD
Sbjct: 69  VRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLD 128

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G  P  V++ T ++  C+ G ++     L E       P   +Y  V+  LC ++
Sbjct: 129 EMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEF 183

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM------------- 509
           ++ E   ++ +M   G+ P+ +TY TI+ +FCK ++LR A  +L +M             
Sbjct: 184 RMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFT 243

Query: 510 --------------------WL--HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
                               W+      P++ +YN+LI GLC  GDLK A     S++ +
Sbjct: 244 ALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRN 303

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT--------------- 592
            +      Y+T++      GD+  AM  + +M   G + ++  YT               
Sbjct: 304 ALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQA 363

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +S    ML +  PP+      ++      G +G    +   M ++G  P+    N
Sbjct: 364 ESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYN 418


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 157/566 (27%), Positives = 261/566 (46%), Gaps = 17/566 (3%)

Query: 96   PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
            PS  SL  ++    K     V   +F  +L+    P  F Y   I        + + LE 
Sbjct: 515  PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 574

Query: 156  TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             N M    + P    Y++L  G   + Q+  A ++  ++L +   P ++TY  LI GYC+
Sbjct: 575  FNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCK 634

Query: 216  IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
             GN E+  K+RE M +   + ++I ++ LL  + K+G +++A  +L EM+  G  PD  T
Sbjct: 635  DGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFT 694

Query: 276  YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
            +SIL  G    DK   A+ +Y       +  N++    +L  LC++  I +A       +
Sbjct: 695  FSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREM 754

Query: 336  MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                + + VLYN MIDGY + G++  A      + ++ + P  + +N LI  FC+ G + 
Sbjct: 755  AKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDME 814

Query: 396  DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            +A + ++ +KL G+ PS  TY   +  Y  +    +   LL+EME     P  V+Y  +I
Sbjct: 815  NAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLI 874

Query: 456  KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
              LCK  KL EA  +  DM   GV+P+   YN +I   C    +  AF+   +M+   +E
Sbjct: 875  NCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIE 934

Query: 516  PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
                TYN LIDGL +NG L  A+ +L+ +    +      Y ++I  +   G+V + +  
Sbjct: 935  LNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIAL 994

Query: 576  FCQMVEKGFEISIRDY--------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQG 621
            + +M   G + +++ Y              TK  F  M      PD  +   +L  +   
Sbjct: 995  YEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVH 1051

Query: 622  GDLGSVFELAAVMIKSGLLPDKFLIN 647
            GD+   F L   MI+  +  DK   N
Sbjct: 1052 GDMDKAFNLQKQMIEKSIGLDKTTYN 1077



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 163/576 (28%), Positives = 281/576 (48%), Gaps = 41/576 (7%)

Query: 49   DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
            +L++ +K       V+  +++IDGLC+  +++DA     E   +   PS+++ N ++  Y
Sbjct: 573  ELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGY 632

Query: 109  CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
            CK G  E +  +   M    + P   ++N L+ GL  AG +E+A     +M   G  PDA
Sbjct: 633  CKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDA 692

Query: 169  ITYSILAKGFH-----------------------------LLS------QISGAWKVIQK 193
             T+SIL  G+                              LL+      QI  A +++ +
Sbjct: 693  FTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGR 752

Query: 194  LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
             + KG  P+ V Y  +I GY + G++       + M  QG K + +AY+ L+ + C+ G 
Sbjct: 753  EMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGD 812

Query: 254  IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
            ++ A   + +M+  G+ P + TY+ILI G  ++ +  K   L  EM      PN  ++G 
Sbjct: 813  MENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGT 872

Query: 314  ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
            ++  LC+   + EA++    +       +V +YN++IDG    G I +A +   ++ +K 
Sbjct: 873  LINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKG 932

Query: 374  ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
            I  ++VT+N+LI G   NGK+A+A  +L  I   GL+P   TY + ++ Y   GN+QR +
Sbjct: 933  IELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCI 992

Query: 434  ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY-VIGVTPDQITYNTIIRS 492
            AL +EM+T  I PT  TY ++I  LC     +E ++L + ++  + + PD + YN ++  
Sbjct: 993  ALYEEMKTSGIKPTLKTYHLLI-SLC----TKEGIELTKKIFGEMSLQPDLLVYNGVLHC 1047

Query: 493  FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            +    D+ KAF L  QM   ++     TYN LI G    G L     L+  ++   +   
Sbjct: 1048 YAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPE 1107

Query: 553  KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
               Y  I+K HC   D   A  ++ +M EKG  + +
Sbjct: 1108 ADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDV 1143



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 241/506 (47%), Gaps = 44/506 (8%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNV 63
            + GMV DA  V+ +MK+        T+ S+L++   ++   D    +Y+    S    N 
Sbjct: 669  KAGMVEDAENVLTEMKDQGFVPDAFTF-SILFDGYSSNDKADAALGVYETAVDSGLKMNA 727

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            YT SI+++ LC++ +++ A   L     K   P+ V  N ++  Y + G    A+     
Sbjct: 728  YTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDA 787

Query: 124  MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG------ 177
            M K G+ PD  +YN LI   C  G ME A +  N M   GV P   TY+IL  G      
Sbjct: 788  MEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYE 847

Query: 178  ----FHLLSQISG-------------------AWKVIQKLLIK------GSDPDIVTYTV 208
                F LL ++                       K+++  ++K      G  P++  Y +
Sbjct: 848  FDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNM 907

Query: 209  LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
            LI G C  G +E+  +  E M  +G +LN++ Y+ L+  +  +G++ EA  +L E+   G
Sbjct: 908  LIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKG 967

Query: 269  LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
            LKPD+ TY+ LI G      V + I LY EM +  I P +     +L+ LC KE I   +
Sbjct: 968  LKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKP-TLKTYHLLISLCTKEGIELTK 1026

Query: 329  MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
              F  + +     D+++YN ++  Y   G++ +A  L +Q+IEK I     T+NSLI G 
Sbjct: 1027 KIFGEMSLQ---PDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQ 1083

Query: 389  CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
             K GK+ + R L+D +K   +EP A TY   +  +CE  +        +EM+ K +    
Sbjct: 1084 LKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDV 1143

Query: 449  VTYTVVIKGLCKQWKLQEAVQLLEDM 474
                 ++ GL ++W+ +EA  ++ +M
Sbjct: 1144 CIGDELVSGLKEEWRSKEAENVISEM 1169



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 140/535 (26%), Positives = 251/535 (46%), Gaps = 22/535 (4%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYD---DIKVSETPRN 62
            Y + G    +  V  +MK  +++ S+ T+N+LL  L    ++ D  +   ++K      +
Sbjct: 632  YCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPD 691

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNA-----IMSRYCKLGFAEVA 117
             +T SI+ DG     +  DA L + ETA      S + +NA     +++  CK G  E A
Sbjct: 692  AFTFSILFDGYSSNDK-ADAALGVYETAVD----SGLKMNAYTCSILLNALCKEGQIEKA 746

Query: 118  KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
            + +    +  GL P+   YN +I G    G +  A    + M + G++PD + Y+ L + 
Sbjct: 747  EEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRT 806

Query: 178  FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
            F  L  +  A + + K+ +KG  P + TY +LI GY +    ++   L + M   G   N
Sbjct: 807  FCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPN 866

Query: 238  VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            V++Y  L++ +CK  ++ EA  +  +ME  G+ P++  Y++LI G C + K+  A +   
Sbjct: 867  VVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSE 926

Query: 298  EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            EM  K I  N   +  ++ GL     + EA      +       DV  YN +I GY   G
Sbjct: 927  EMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAG 986

Query: 358  NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            N+   + LY ++    I P++ T++ LI   C    +   +++   +    L+P  + Y 
Sbjct: 987  NVQRCIALYEEMKTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEM---SLQPDLLVYN 1042

Query: 418  TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
              ++ Y   G++ +   L ++M  K+IG    TY  +I G  K  KL E   L+++M   
Sbjct: 1043 GVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAR 1102

Query: 478  GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
             + P+  TY+ I++  C+ KD   A+     +W   ++      ++ I    V+G
Sbjct: 1103 EMEPEADTYDIIVKGHCEMKDYMGAY-----VWYREMQEKGLLLDVCIGDELVSG 1152



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 182/410 (44%), Gaps = 38/410 (9%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDI---KVSETPRN 62
            YSR G +  A   I  M++  +K     YN L+        M +   ++   K+     +
Sbjct: 772  YSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPS 831

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            V T +I+I G  ++         L+E       P+VVS   +++  CK      A+ +  
Sbjct: 832  VETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 891

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             M   G+ P+   YN+LI G C  G +E+A  F+ +M + G+E + +TY+ L  G  +  
Sbjct: 892  DMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNG 951

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +++ A  ++ ++  KG  PD+ TY  LI GY   GNV+  + L E M + G K  +  Y 
Sbjct: 952  KLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYH 1011

Query: 243  VLLSSMCKSG-------------------------------RIDEALGLLYEM--EAVGL 269
            +L+S   K G                                +D+A  L  +M  +++GL
Sbjct: 1012 LLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGL 1071

Query: 270  KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
              D  TY+ LI G  K  K+ +   L +EM ++ + P +  +  I+ G CE +    A +
Sbjct: 1072 --DKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYV 1129

Query: 330  YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
            ++  +     + DV + + ++ G  +     EA  +  ++  +++   IV
Sbjct: 1130 WYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRKLGDVIV 1179


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/523 (28%), Positives = 261/523 (49%), Gaps = 21/523 (4%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  ML+    P  F ++ L+  +   G    A+   + +   G+ P   T +IL   +  
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
            + +S A+ ++  +L  G  P++VT+  LI G+C  G V + +  R  ++++G+ L+  +
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y  L++ +CK+G+  +AL LL +ME   ++P+L+TYS +I GLCK   +  A++L++ + 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           S+ I  +  A+ +++ G C      EA      ++  N   D   +NI++D   K G I 
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  ++  ++++   P IVT+N+L+ GFC +  V++AR L + +   GLEP  + Y   +
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YC+   +   + L +E+  K + P   TY  +I GLCK  ++    +L+++M   G +
Sbjct: 343 NGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQS 402

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +TYN  + +FCK K   KA  L  Q+ +  + P    Y+++++  C    LK A+  
Sbjct: 403 PDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEA 461

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
           L  L  H        YT +I A C +    +AMT   +M +                   
Sbjct: 462 LQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDD------------------- 502

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
            N  PPD    E ++ A  +  +     +L   MI+ GL+ D+
Sbjct: 503 -NDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDE 544



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 255/490 (52%), Gaps = 1/490 (0%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P  ++    ++  + +      AI    +   K   PS+ +L  +++ YC       A  
Sbjct: 52  PPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFS 111

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   +LK G  P+  ++N LI+G CI G + +A+ F  D+   G   D  +Y  L  G  
Sbjct: 112 LLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLC 171

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              Q   A +++QK+      P+++TY+ +I G C+   + + L+L  ++ S+G  ++V+
Sbjct: 172 KNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVV 231

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           AY+ L+   C  G+  EA  LL  M    + PD  T++IL+  LCK+ ++ +A  ++  M
Sbjct: 232 AYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVM 291

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             +   P+   + A++ G C    ++EAR  F+ ++      DV+ YN++I+GY K+  +
Sbjct: 292 MKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMV 351

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA+ L++++  K + P++ T+NSLI G CK G+++  + L+D +   G  P  VTY  F
Sbjct: 352 DEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIF 411

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++A+C+    ++ ++L +++  + I P    Y V+++  CK  KL+ A + L+ + + G 
Sbjct: 412 LDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGC 470

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+  TY  +I + CK     +A  LL++M  ++  P + T+  +I  L    +   A+ 
Sbjct: 471 CPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEK 530

Query: 540 LLVSLQEHNI 549
           L + + E  +
Sbjct: 531 LRLEMIERGL 540



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 243/506 (48%), Gaps = 1/506 (0%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           + D +L       K   P +   + ++    ++G    A  LF  +   G+ P   +  I
Sbjct: 36  VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTI 95

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI+  C    +  A      + + G +P+ +T++ L  GF +   +S A      L+ KG
Sbjct: 96  LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
              D  +Y  LI G C+ G   + L+L + M     + N+I YS ++  +CK   I +AL
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L   + + G+  D+V Y+ LI G C   +  +A +L   M    I+P+ +    ++  L
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++  I EA+  F  ++      D+V YN +++G+    N+ EA +L+ +++++ + P +
Sbjct: 276 CKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDV 335

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           + +N LI G+CK   V +A  L   I+   L P+  TY + ++  C+ G +  +  L+ E
Sbjct: 336 LNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDE 395

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M  +   P  VTY + +   CK    ++A+ L   + V G+ PD   Y+ I+ +FCK + 
Sbjct: 396 MCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEK 454

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L+ A + L  + +H   P   TY I+I+ LC +     A  LL  + +++     V + T
Sbjct: 455 LKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFET 514

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGF 584
           II A     +  KA     +M+E+G 
Sbjct: 515 IIGALQERNETDKAEKLRLEMIERGL 540



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/501 (28%), Positives = 235/501 (46%), Gaps = 4/501 (0%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           V D +    +M        I  ++ LL     + H      L+  +       ++ T +I
Sbjct: 36  VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTI 95

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+  C Q+ L  A   L       F P++V+ N +++ +C  G    A      ++  G
Sbjct: 96  LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
              D FSY  LI+GLC  G   +AL+    M    V P+ ITYS +  G      I+ A 
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++   +  +G   D+V Y  LI G C +G   E  +L  +M+      +   +++L+ ++
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK GRI EA G+   M   G KPD+VTY+ L+ G C  + V +A +L+N M  + + P+ 
Sbjct: 276 CKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDV 335

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  ++ G C+ +M+ EA + F  +   N + ++  YN +IDG  KLG +    +L  +
Sbjct: 336 LNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDE 395

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + ++  SP IVT+N  +  FCK+     A  L   I + G+ P    Y   +  +C+   
Sbjct: 396 MCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEK 454

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           ++     LQ +      P   TYT++I  LCK     EA+ LL  M      PD +T+ T
Sbjct: 455 LKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFET 514

Query: 489 IIRSFCKCKDLRKAFQLLNQM 509
           II +  +  +  KA +L  +M
Sbjct: 515 IIGALQERNETDKAEKLRLEM 535



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 191/393 (48%), Gaps = 33/393 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + G   DA+ ++ KM+E  ++ ++ TY                                S
Sbjct: 172 KNGQTRDALQLLQKMEEDLVRPNLITY--------------------------------S 199

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
            VIDGLC+   + DA+        +     VV+ N+++   C +G    A  L  +M++ 
Sbjct: 200 TVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRG 259

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            ++PD +++NIL+  LC  G + EA      M + G +PD +TY+ L +GF L + +S A
Sbjct: 260 NINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEA 319

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++  +++ +G +PD++ Y VLI GYC+I  V+E + L + +  +    N+  Y+ L+  
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDG 379

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK GR+     L+ EM   G  PD+VTY+I +   CK     KAI L+ ++  + I P+
Sbjct: 380 LCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIWPD 438

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
            + +  I+   C+ E +  A      L++  C  +V  Y IMI+   K  +  EA+ L  
Sbjct: 439 FYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLS 498

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
           ++ +    P  VTF ++I    +  +   A +L
Sbjct: 499 KMDDNDCPPDAVTFETIIGALQERNETDKAEKL 531



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 127/305 (41%), Gaps = 19/305 (6%)

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K   + + +  + +++ K   P I  F+ L+    + G    A  L   +   G+ PS  
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           T T  +N YC + ++    +LL  +      P  VT+  +I G C    + +A+    D+
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G   D+ +Y ++I   CK    R A QLL +M    + P   TY+ +IDGLC +  +
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-- 592
            +A  L   +    I +  VAY ++I   C+ G   +A      MV     I+  DYT  
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGN--INPDDYTFN 269

Query: 593 ---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
                          +  F +M+  G  PD      ++  F    ++    EL   M+K 
Sbjct: 270 ILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKR 329

Query: 638 GLLPD 642
           GL PD
Sbjct: 330 GLEPD 334



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 33/229 (14%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y +  MV +A+ +  +++  +L  ++ TYNSL                            
Sbjct: 345 YCKIDMVDEAMVLFKEIRCKNLVPNLATYNSL---------------------------- 376

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
               IDGLC+  R+      + E   +   P +V+ N  +  +CK    E A  LF  ++
Sbjct: 377 ----IDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV 432

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G+ PD + Y++++   C    ++ A E    +  HG  P+  TY+I+           
Sbjct: 433 Q-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFD 491

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
            A  ++ K+      PD VT+  +I    +    ++  KLR  M+ +G 
Sbjct: 492 EAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 174/678 (25%), Positives = 293/678 (43%), Gaps = 69/678 (10%)

Query: 35  NSLLYNLRHTDIMWDLYDDIKVSETP-RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKE 93
           N+ L  L    ++ D+  +   S  P RN+ T + +I+  C    L  +   L       
Sbjct: 45  NAFLMALARHRMLADM--ESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAG 102

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           F P   +  + +  YC+ G    A  LF LM   G    AF+Y  L+HGLC AG + EA+
Sbjct: 103 FAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAM 162

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
                M   G  PD   Y+ +  G     +   A  ++   + +G +P++V Y  LI GY
Sbjct: 163 SVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGY 222

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C +G++E  + + E M   G   NV  Y+ L+S  CKS ++D A+ L   M   GL P++
Sbjct: 223 CNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNV 282

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VTY+ LI+G C   ++  A +L   M +  + PN +    ++  LC+ E + EA++   S
Sbjct: 283 VTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGS 342

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           LI      + ++Y  +IDG  K G    A +L + L+ +   P   T++SLI G C+  +
Sbjct: 343 LIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKE 402

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           +++A  +LD +   G++PS VTYT  ++    E        +L +M    I P   TYT+
Sbjct: 403 LSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTI 462

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
            ++  C + ++++A  ++  M   GV P+ +TYN +I  +       +AF     M  + 
Sbjct: 463 FVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANG 522

Query: 514 LEPTSATYNIL------------------------------------------------- 524
            +P   +Y +L                                                 
Sbjct: 523 CKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYN 582

Query: 525 --IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
             +  LC    L  A  LL+ +Q  N++ ++  YT+II   C    + +A+TF   MV+ 
Sbjct: 583 CFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKS 642

Query: 583 GFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           G+   +  Y                K  F  MLS  +  ++    +++    Q G +   
Sbjct: 643 GYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAEC 702

Query: 628 FELAAVMIKSGLLPDKFL 645
             L +VM +    P   L
Sbjct: 703 SSLLSVMEEKNYRPSDAL 720



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 151/608 (24%), Positives = 282/608 (46%), Gaps = 21/608 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y R G++  A  +   M       +  TY +LL+ L    ++ +   ++  ++      +
Sbjct: 117 YCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPD 176

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +  + ++ GLC   R ++A   L +   + F P+VV  NA++  YC +G  E+A  +F 
Sbjct: 177 PHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFE 236

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G  P+  +Y  LI G C +  ++ A+   + M   G+ P+ +TY+ L +G     
Sbjct: 237 RMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDG 296

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           Q+  A++++Q +   G  P+  T +VLI   C+   V E   L   ++ +G K+N I Y+
Sbjct: 297 QLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYT 356

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +CK+GR   A  L+  + + G  PD  TYS LI GLC+Q ++ +A+ + ++M  K
Sbjct: 357 SLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEK 416

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   +  I+  L  +     ++   D +I +    DV  Y I +  Y   G + +A
Sbjct: 417 GVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDA 476

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +   +++  + P++VT+N+LI G+   G  + A      +  +G +P+  +YT  +  
Sbjct: 477 EHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRL 536

Query: 423 YCEE----------------GNIQRLLALLQEMETKAIGPTHVT-YTVVIKGLCKQWKLQ 465
             ++                  ++ L  LL+EM  K   P+ +  Y   +  LC+  +L 
Sbjct: 537 LIKKESSNNIPANSVSIWKIAEMKYLHGLLEEM-VKLQLPSEIDIYNCFLTSLCRVDRLD 595

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA  LL +M    +TP +  Y +II   C+ K L +A   ++ M      P   +Y  +I
Sbjct: 596 EAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHII 655

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
             LC  G ++ A  +   +     +  ++A+  +I     +G V +  +    M EK + 
Sbjct: 656 SSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYR 715

Query: 586 ISIRDYTK 593
            S   Y +
Sbjct: 716 PSDALYAR 723



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 225/499 (45%), Gaps = 22/499 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + ++  +  A+ + ++M +  L  ++ TY +L+         D  + L   ++ S    N
Sbjct: 257 FCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPN 316

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T S++ID LC+  R+ +A L L     K    + +   +++   CK G    A  L  
Sbjct: 317 EWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQ 376

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ++  G  PDA +Y+ LI GLC    + EA+   +DM   GV+P  +TY+I+        
Sbjct: 377 TLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREV 436

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
              G+ K++ K++  G  PD+ TYT+ +  YC  G +E+   +   M+  G   N++ Y+
Sbjct: 437 GADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYN 496

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+      G   +A      M A G KP+  +Y++L+R L K++         N + + 
Sbjct: 497 ALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESS-------NNIPAN 549

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +S    A    L GL E EM+   ++   S        ++ +YN  +    ++  + EA
Sbjct: 550 SVSIWKIAEMKYLHGLLE-EMV---KLQLPS--------EIDIYNCFLTSLCRVDRLDEA 597

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L  ++    ++PS   + S+I   C+   + +A   +D++   G  P   +Y   +++
Sbjct: 598 KILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISS 657

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            CEEG+IQ    +  +M +K      + + ++I GL ++  + E   LL  M      P 
Sbjct: 658 LCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPS 717

Query: 483 QITYNTIIRSFCKCKDLRK 501
              Y  +        D+++
Sbjct: 718 DALYARLTGKITDANDIQE 736



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 93/238 (39%), Gaps = 15/238 (6%)

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +NA+       R+LA ++   ++       TYT +I   C    L  + + L  +   G 
Sbjct: 44  LNAFLMALARHRMLADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGF 103

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD   Y + +  +C+   L  A +L   M L     T+ TY  L+ GLC  G ++ A  
Sbjct: 104 APDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMS 163

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------ 593
           +   +Q    +     Y T++   C  G   +A T     + +GFE ++  Y        
Sbjct: 164 VFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYC 223

Query: 594 ---------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                      F  M  NG  P+      ++  F +   L     L + M+ +GL+P+
Sbjct: 224 NVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPN 281


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/517 (29%), Positives = 251/517 (48%), Gaps = 10/517 (1%)

Query: 30  SIQTYNSLLYNLR----HTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILF 85
           S ++YN++L        HTD++      +     P   +T SI    LC+  R  +A+  
Sbjct: 135 SFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTM 194

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
           L+  A     P  V    ++   C  G    A  L   M   G   D  ++N ++HGLC 
Sbjct: 195 LRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCT 254

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
            G + EA    + M   G  P+AITY  L KG  L SQ+  A    + +L +  + ++V 
Sbjct: 255 LGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEA----RTMLGRVPELNVVL 310

Query: 206 YTVLICGYCQI-GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           +  +I G C + G ++E  +L E M S+G   +   YS+L+  +CK GR+  A+ LL EM
Sbjct: 311 FNTVI-GRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREM 369

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           E  G  P +VTY+IL+   C+         +   M  K +S N   +  ++  +C+   +
Sbjct: 370 EDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRM 429

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            +A  +   +       D+  YN +I        + EA  L+  L+ + +  + +T+N+L
Sbjct: 430 DDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTL 489

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I+   +NG   DA  L + + LHG     V+Y   + A C +GN+ R + LL EM  K I
Sbjct: 490 IHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGI 549

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P +V+Y ++I  LCK  ++++A++L ++M    +TPD +TYNT+I   CK   +  A  
Sbjct: 550 KPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALN 609

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           LL ++   ++     TYNILI   C    L +A  LL
Sbjct: 610 LLEKLHNEDVHADIITYNILISWHCKARLLHDASMLL 646



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 239/496 (48%), Gaps = 4/496 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+  + +      C+LG A+ A  +   M ++G  PD   Y  +IH LC  G + EA   
Sbjct: 170 PTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATL 229

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            ++M   G   D  T++ +  G   L ++  A +++ +++I+G  P+ +TY  L+ G C 
Sbjct: 230 LDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCL 289

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              VEE       ML +  +LNV+ ++ ++      G++ EA  L   M + G  PD  T
Sbjct: 290 ASQVEEA----RTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHT 345

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           YSILI GLCK  ++  A++L  EM  K  +P+   +  +L   C   M    R   + + 
Sbjct: 346 YSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMS 405

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 ++  YN MI    K   + +A++  +++  +   P I T+N++IY  C N ++ 
Sbjct: 406 DKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQME 465

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  L + +   G+  +A+TY T ++A    G+ Q  ++L  +M         V+Y  +I
Sbjct: 466 EAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLI 525

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           K LC+   +  ++ LL +M   G+ P+ ++YN +I   CK + +R A +L  +M    L 
Sbjct: 526 KALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELT 585

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TYN LI+GLC  G +  A  LL  L   ++    + Y  +I  HC    +H A   
Sbjct: 586 PDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASML 645

Query: 576 FCQMVEKGFEISIRDY 591
             + V  G   + R +
Sbjct: 646 LNRAVTSGITPNERTW 661



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 224/458 (48%), Gaps = 31/458 (6%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           VI  LC Q  + +A   L E         V + N I+   C LG    A  L   M+  G
Sbjct: 213 VIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRG 272

Query: 129 LHPDAFSYNILIHGLCIA-------------------------------GSMEEALEFTN 157
             P+A +Y  L+ GLC+A                               G ++EA E   
Sbjct: 273 CVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYE 332

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            MG  G  PDA TYSIL  G   L ++  A K+++++  KG  P IVTYT+L+  +C+ G
Sbjct: 333 TMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNG 392

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
             +    + EVM  +G  +N+  Y+ ++ ++CK  R+D+A+  + EM++ G KPD+ TY+
Sbjct: 393 MWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYN 452

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            +I  LC  +++ +A  L+  +  + +  N+  +  ++  L       +A    + +++ 
Sbjct: 453 TIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLH 512

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
            C  D+V YN +I    + GN+  ++ L  ++ EK I P+ V++N LI   CK  +V DA
Sbjct: 513 GCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDA 572

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             L   +    L P  VTY T +N  C+ G +   L LL+++  + +    +TY ++I  
Sbjct: 573 LELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISW 632

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
            CK   L +A  LL      G+TP++ T+  ++++F +
Sbjct: 633 HCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 220/469 (46%), Gaps = 7/469 (1%)

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLLSQI 184
           ++ + P   SYN ++     A    + L     M  R  V P   T+SI A+    L + 
Sbjct: 129 RFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRA 188

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +++ +   G  PD V Y  +I   C  G V E   L + M   G   +V  ++ +
Sbjct: 189 DEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDI 248

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +C  GR+ EA  L+  M   G  P+ +TY  L++GLC   +V +A  +       R+
Sbjct: 249 VHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLG-----RV 303

Query: 305 SPNSFAHGAILLGLCEKE-MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
              +      ++G C  +  + EA   ++++    C  D   Y+I+I G  KLG +G A+
Sbjct: 304 PELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAM 363

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L R++ +K  +PSIVT+  L++ FC+NG   + R +L+ +   GL  +   Y   + A 
Sbjct: 364 KLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAV 423

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++  +   +  +QEM+++   P   TY  +I  LC   +++EA  L E++   GV  + 
Sbjct: 424 CKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANA 483

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           ITYNT+I +  +    + A  L N M LH       +YN LI  LC +G++  +  LL  
Sbjct: 484 ITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSE 543

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           + E  I    V+Y  +I   C    V  A+    +M+ +     I  Y 
Sbjct: 544 MAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYN 592



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 187/370 (50%), Gaps = 39/370 (10%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +LY+ +     P + +T SI+I GLC+  RL  A+  L+E   K F PS+V+   ++  +
Sbjct: 329 ELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSF 388

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           C+ G  +  + +  +M   GL  +   YN +I  +C    M++A+ F  +M   G +PD 
Sbjct: 389 CRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDI 448

Query: 169 ITYSILAKGFHLL--SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
            TY+ +   +HL   +Q+  A  + + LL +G   + +TY  LI    + G+ ++ + L 
Sbjct: 449 CTYNTII--YHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLA 506

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
             M+  G  L++++Y+ L+ ++C+ G +D ++ LL EM   G+KP+ V+Y++LI  LCK 
Sbjct: 507 NDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKT 566

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            +V  A++L  EM ++ ++P                                   D+V Y
Sbjct: 567 RRVRDALELSKEMLNQELTP-----------------------------------DIVTY 591

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N +I+G  K+G +  A+ L  +L  + +   I+T+N LI   CK   + DA  LL+    
Sbjct: 592 NTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVT 651

Query: 407 HGLEPSAVTY 416
            G+ P+  T+
Sbjct: 652 SGITPNERTW 661



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 165/380 (43%), Gaps = 9/380 (2%)

Query: 244 LLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           LL  + +S     AL LL ++     + P   +Y+ ++    + D     + LY  M  +
Sbjct: 106 LLIPLFRSLAPGRALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHR 165

Query: 303 -RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
            R+ P +F        LC      EA     S+    C+ D VLY  +I      G + E
Sbjct: 166 DRVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNE 225

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L  ++     S  + TFN +++G C  G++ +A RL+D + + G  P+A+TY   + 
Sbjct: 226 AATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLK 285

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C    ++    +L  +    +    V +  VI       KL+EA +L E M   G  P
Sbjct: 286 GLCLASQVEEARTMLGRVPELNV----VLFNTVIGRCLLDGKLKEAAELYETMGSKGCPP 341

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D  TY+ +I   CK   L  A +LL +M      P+  TY IL+   C NG   N   +L
Sbjct: 342 DAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAML 401

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
             + +  +S+    Y  +I A C +  +  AM F  +M  +G++  I  Y    + +  +
Sbjct: 402 EVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNN 461

Query: 602 NGFPPDQEICEVMLIAFHQG 621
           N     + + E +L   H+G
Sbjct: 462 NQMEEAEYLFENLL---HEG 478



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 160/318 (50%), Gaps = 5/318 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNV 63
           + G +  A+ ++ +M++     SI TY  LL++      MWD    + + +       N+
Sbjct: 355 KLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNG-MWDNIRAMLEVMSDKGLSMNL 413

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
              + +I  +C+  R+ DA+ F+QE   + + P + + N I+   C     E A+ LF  
Sbjct: 414 EGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFEN 473

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +L  G+  +A +YN LIH L   GS ++A+   NDM  HG   D ++Y+ L K       
Sbjct: 474 LLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGN 533

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  +  ++ ++  KG  P+ V+Y +LI   C+   V + L+L + ML+Q    +++ Y+ 
Sbjct: 534 VDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNT 593

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++ +CK G +  AL LL ++    +  D++TY+ILI   CK   +H A  L N   +  
Sbjct: 594 LINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSG 653

Query: 304 ISPNSFAHGAILLGLCEK 321
           I+PN    G ++     K
Sbjct: 654 ITPNERTWGIMVQNFVRK 671



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 128/287 (44%), Gaps = 32/287 (11%)

Query: 360 GEAVQLYRQLIEK-RISPSIVTFNSLIYGF----CKNGKVADARRLLDTIKLHGLEPSAV 414
           G A+ L  QL  +  +SPS  ++N+++  F    C    ++  RR++   ++    P+  
Sbjct: 117 GRALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRV---PPTTF 173

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           T++    A C  G     L +L+ M      P  V Y  VI  LC Q  + EA  LL++M
Sbjct: 174 TFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEM 233

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
           +++G + D  T+N I+   C    LR+A +L+++M +    P + TY  L+ GLC+   +
Sbjct: 234 FLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQV 293

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
           + A  +L  + E N+    V + T+I     +G + +A   +  M  KG           
Sbjct: 294 EEARTMLGRVPELNV----VLFNTVIGRCLLDGKLKEAAELYETMGSKGC---------- 339

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                     PPD     +++    + G LGS  +L   M   G  P
Sbjct: 340 ----------PPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAP 376


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 249/507 (49%), Gaps = 32/507 (6%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR-YCKLGFAEVAKGLFCLML 125
           ++V+  L +     DA+   +    ++  P       + +R  C+LG A+ A  L   M 
Sbjct: 143 NVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMA 202

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           ++G  PDA  Y  +IH LC  G + EA    N+M   G   D  T+  + +G   L ++ 
Sbjct: 203 RHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVR 262

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQI----------------------------- 216
            A +++ +++ KG  P ++TY  L+ G C++                             
Sbjct: 263 EAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCL 322

Query: 217 --GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
             G + E  +L E M  +G + +   YS+L+  +CK GRI  A+ LL EME  G  P++V
Sbjct: 323 AEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVV 382

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+I++   CK         L  EM +K ++ NS  +  ++  LC+   + EA      +
Sbjct: 383 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 442

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
               C  D+  YN +I        + EA  ++  L+E+ +  + +T+N++I+   ++G+ 
Sbjct: 443 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRW 502

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            DA RL   + LHG     V+Y   + A C++GN+ R L LL+EM  K I P +V+Y ++
Sbjct: 503 QDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNIL 562

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I  LCK+ ++++A++L + M   G+ PD +TYNT+I   CK   +  A  LL ++   N+
Sbjct: 563 ISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENV 622

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLL 541
            P   TYNILI   C    L +A  LL
Sbjct: 623 HPDIITYNILISWHCKVRLLDDAAMLL 649



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 250/521 (47%), Gaps = 35/521 (6%)

Query: 23  KELDLKVSIQTYNSLLYNLRHTDIMWD---LYDD-IKVSETPRNVYTNSIVIDGLCQQSR 78
           +   ++ S ++YN +L  L   D   D   LY   +     P   +T  +    LC+  R
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGR 190

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
             +A+  L+  A     P  V    ++   C  G    A  L   ML  G   D  +++ 
Sbjct: 191 ADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ--------------- 183
           ++ G+C  G + EA    + M   G  P  +TY  L +G   + Q               
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN 310

Query: 184 ----------------ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
                           ++ A ++ + + +KG  PD  TY++L+ G C++G +   ++L  
Sbjct: 311 VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLR 370

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M  +GF  NV+ Y+++L S CK+G  D+   LL EM A GL  +   Y+ +I  LCK  
Sbjct: 371 EMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDG 430

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           ++ +A+ L  EM S+  +P+  ++  I+  LC  E + EA   F++L+    + + + YN
Sbjct: 431 RMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYN 490

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I   ++ G   +AV+L +++I    S  +V++N LI   CK+G V  +  LL+ +   
Sbjct: 491 TIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 550

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G++P+ V+Y   ++  C+E  ++  L L ++M  + + P  VTY  +I GLCK   +  A
Sbjct: 551 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAA 610

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           + LLE ++   V PD ITYN +I   CK + L  A  LLN+
Sbjct: 611 LNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 227/471 (48%), Gaps = 5/471 (1%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLL 181
           L  ++G+ P   SYN+++  L  A    +AL     M  R  V P   T+ + A+    L
Sbjct: 129 LPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRL 188

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A  +++ +   G  PD V Y  +I   C  G V E   L   ML  G   +V  +
Sbjct: 189 GRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTF 248

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
             ++  MC  GR+ EA  L+  M   G  P ++TY  L++GLC+  +  +A      M  
Sbjct: 249 DDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLG 304

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +    N      ++ G   +  + EA   ++++ +  C  D   Y+I++ G  KLG IG 
Sbjct: 305 RVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGS 364

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           AV+L R++ +K  +P++VT+  +++ FCKNG   D R LL+ +   GL  ++  Y   + 
Sbjct: 365 AVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 424

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           A C++G +   + L+QEM ++   P   +Y  +I  LC   +++EA  + E++   GV  
Sbjct: 425 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVA 484

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           + ITYNTII +  +    + A +L  +M LH       +YN LI  +C +G++  +  LL
Sbjct: 485 NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLL 544

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             + E  I    V+Y  +I   C E  V  A+    QM+ +G    I  Y 
Sbjct: 545 EEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 595



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/587 (25%), Positives = 260/587 (44%), Gaps = 64/587 (10%)

Query: 84  LFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLML-KYGLHPDAFSYNILI 140
           L L +   + FG  PS  S N ++S   +      A  L+  M+ +  + P  F++ +  
Sbjct: 123 LHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAA 182

Query: 141 HGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
             LC  G  +EAL     M RHG  PDA+ Y  +         ++ A  ++ ++L+ G  
Sbjct: 183 RALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCA 242

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
            D+ T+  ++ G C +G V E  +L + M+++G    V+ Y  LL  +C+  + DEA  +
Sbjct: 243 ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM 302

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L  +  +    ++V ++ +I G   + K+ +A +LY  M  K   P++  +  ++ GLC+
Sbjct: 303 LGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCK 358

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              I  A      +       +VV Y I++  + K G   +   L  ++  K ++ +   
Sbjct: 359 LGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG 418

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEP----------------------------- 411
           +N +IY  CK+G++ +A  L+  ++  G  P                             
Sbjct: 419 YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL 478

Query: 412 ------SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
                 + +TY T ++A   +G  Q  + L +EM         V+Y  +IK +CK   + 
Sbjct: 479 EEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVD 538

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
            ++ LLE+M   G+ P+ ++YN +I   CK + +R A +L  QM    L P   TYN LI
Sbjct: 539 RSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLI 598

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC-------AEGDVHKAMTFFCQ 578
           +GLC  G +  A  LL  L   N+    + Y  +I  HC       A   +++AM   C 
Sbjct: 599 NGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCP 658

Query: 579 ---------MVEKGFEISIR----DYTKSFFCMMLSNGFPPDQEICE 612
                    + +K F++ +     D+  S  C+  S   P  ++ CE
Sbjct: 659 VGDRRIMQILPDKNFKLYLHTKGDDFQHSLGCVKPS--CPAGKDRCE 703



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 170/344 (49%), Gaps = 36/344 (10%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +LY+ + +     + +T SI++ GLC+  R+  A+  L+E   K F P+VV+   ++  +
Sbjct: 332 ELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSF 391

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK G  +  + L   M   GL  ++  YN +I+ LC  G M+EA+    +M   G  PD 
Sbjct: 392 CKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDI 451

Query: 169 ITYSI----------LAKGFHLLSQI---------------------SGAW----KVIQK 193
            +Y+           + +  H+   +                      G W    ++ ++
Sbjct: 452 CSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKE 511

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +++ G   D+V+Y  LI   C+ GNV+  L L E M  +G K N ++Y++L+S +CK  R
Sbjct: 512 MILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR 571

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           + +AL L  +M   GL PD+VTY+ LI GLCK   +H A+ L  ++ ++ + P+   +  
Sbjct: 572 VRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNI 631

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNC-IQDVVLYNIMIDGYVKL 356
           ++   C+  ++ +A M  +  + + C + D  +  I+ D   KL
Sbjct: 632 LISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPDKNFKL 675



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 137/293 (46%), Gaps = 32/293 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + + GM  D   ++ +M    L ++ Q YN ++Y                          
Sbjct: 391 FCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY-------------------------- 424

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
                  LC+  R+ +A+  +QE   +   P + S N I+   C     E A+ +F  +L
Sbjct: 425 ------ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL 478

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G+  +  +YN +IH L   G  ++A+    +M  HG   D ++Y+ L K       + 
Sbjct: 479 EEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVD 538

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            +  +++++  KG  P+ V+Y +LI   C+   V + L+L + ML+QG   +++ Y+ L+
Sbjct: 539 RSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLI 598

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + +CK G +  AL LL ++    + PD++TY+ILI   CK   +  A  L N 
Sbjct: 599 NGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 49/321 (15%)

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           YN+++    +     +A+ LYR+++ + R+ P+  TF       C+ G+  +A  LL  +
Sbjct: 142 YNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGM 201

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
             HG  P AV Y T ++A C++G +     LL EM          T+  V++G+C   ++
Sbjct: 202 ARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRV 261

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD-------------------------- 498
           +EA +L++ M   G  P  +TY  +++  C+ +                           
Sbjct: 262 REAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGC 321

Query: 499 -----LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
                L +A +L   M L   +P + TY+IL+ GLC  G + +A  LL  +++   +   
Sbjct: 322 LAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNV 381

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM--------------- 598
           V YT ++ + C  G          +M  KG  ++ + Y    + +               
Sbjct: 382 VTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQE 441

Query: 599 MLSNGFPPDQEICEVMLIAFH 619
           M S G  PD  IC    I +H
Sbjct: 442 MRSQGCNPD--ICSYNTIIYH 460



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 32/288 (11%)

Query: 360 GEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADA----RRLLDTIKLHGLEPSAV 414
           G A+ L  QL  +  + PS  ++N ++    +    ADA    RR++   ++    P+  
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRV---PPTTF 176

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           T+     A C  G     LALL+ M      P  V Y  VI  LC Q  + EA  LL +M
Sbjct: 177 TFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
            ++G   D  T++ ++R  C    +R+A +L+++M      P   TY  L+ GLC     
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
             A  +L  + E N+    V + T+I    AEG + +A   +  M  KG +         
Sbjct: 297 DEARAMLGRVPELNV----VLFNTVIGGCLAEGKLAEATELYETMGLKGCQ--------- 343

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                      PD     +++    + G +GS   L   M K G  P+
Sbjct: 344 -----------PDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPN 380



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 3/216 (1%)

Query: 4   FVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETP 60
           +   + G + +A+ +I +M+       I +YN+++Y+L + + M +   +++++      
Sbjct: 424 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 483

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N  T + +I  L +  R QDA+   +E         VVS N ++   CK G  + +  L
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 543

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M + G+ P+  SYNILI  LC    + +ALE +  M   G+ PD +TY+ L  G   
Sbjct: 544 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           +  +  A  +++KL  +   PDI+TY +LI  +C++
Sbjct: 604 MGWMHAALNLLEKLHNENVHPDIITYNILISWHCKV 639


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/604 (25%), Positives = 291/604 (48%), Gaps = 23/604 (3%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVS 57
           L   Y+  GM+  A  +  +++E    +   T+ + L  L      WD    LYD++   
Sbjct: 139 LVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGE 198

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           ++  + Y+  +++ GLC + R+++ +  ++   G    P VV  N ++  YC+ G  ++ 
Sbjct: 199 DSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRG--DMG 256

Query: 118 KGLFCL--MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
           +GL  L  M   G  P   +Y  LI+ L   G +E+      +M + G+ P+   Y+ + 
Sbjct: 257 RGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVI 316

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                    + A  +++++   G DPDI+T+  LI G C  G+V +        + +   
Sbjct: 317 DALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELN 376

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            N ++Y+ L+   C  G +  A  LL EM   G  PD+VT+  LI GL    KV +A+ +
Sbjct: 377 PNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIV 436

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
             +M  +++ P+   +  ++ GLC+K M+  A+   + ++  N   D  +Y  +IDG+++
Sbjct: 437 REKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIR 496

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
             N+G+A +++  +  K + P IV+ N++I G+C+ G +++A   +  ++  G  P   T
Sbjct: 497 SENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFT 556

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           YTT ++ Y ++GN+   L  L +M  +   P  VTY+ +I G CK      A  L  +M 
Sbjct: 557 YTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQ 616

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL------- 528
              ++P+ +TY  +I S  K   + +A      M L++  P   T + L++GL       
Sbjct: 617 AEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCV 676

Query: 529 -----CVNGDLKNADCLLVSLQEHNISL---TKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
                C   ++   D LLV  ++    +      AY  II + C    + +A+ F  +M 
Sbjct: 677 INSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMA 736

Query: 581 EKGF 584
           +KG+
Sbjct: 737 KKGY 740



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 228/466 (48%), Gaps = 1/466 (0%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG-RHGVEPDAITYSILAKGFHLLSQISG 186
           G  P       L+     AG + +A +    +  ++G  P+    + L K      +   
Sbjct: 128 GAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDD 187

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A K+  ++L + S  D  +  VL+ G C  G VEEGLKL E     G   +V+ Y+VL+ 
Sbjct: 188 ARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLID 247

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             C+ G +   L LL EMEA G  P LVTY  LI  L K+  + K   L+ EM  + +SP
Sbjct: 248 GYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSP 307

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N   + +++  LC+    T+A +    +  S C  D++ +N +I G    G++ +A    
Sbjct: 308 NVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 367

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           R+ I + ++P+ +++  LI+GFC  G++  A  LL  +   G  P  VT+   ++     
Sbjct: 368 REAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVA 427

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +   L + ++M  + + P    Y V+I GLCK+  L  A  +LE+M    V PD+  Y
Sbjct: 428 GKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVY 487

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
            T+I  F + ++L  A ++   M    + P   + N +I G C  G +  A   + ++++
Sbjct: 488 ATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRK 547

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
                 +  YTT+I  +  +G+++ A+ + C M+++  + ++  Y+
Sbjct: 548 VGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYS 593



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 136/532 (25%), Positives = 241/532 (45%), Gaps = 38/532 (7%)

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK--YGLHPDAFSYNILIHGL 143
           LQ  +     P+   L A+++ Y   G    A  + C  L+  YG  P+    N L+  L
Sbjct: 121 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATDM-CERLREQYGSLPEVTHCNRLLKLL 179

Query: 144 CIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
                 ++A +  ++M       D  +  +L +G  L  ++    K+I+     G  P +
Sbjct: 180 VEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHV 239

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGF----------------------------- 234
           V Y VLI GYC+ G++  GL L   M ++GF                             
Sbjct: 240 VFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLE 299

Query: 235 ------KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
                   NV  Y+ ++ ++CK     +A+ +L +M A G  PD++T++ LI GLC +  
Sbjct: 300 MRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGH 359

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V KA     E   + ++PN  ++  ++ G C +  +  A      ++      DVV +  
Sbjct: 360 VRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGA 419

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I G V  G + EA+ +  ++ E+++ P +  +N LI G CK   +  A+ +L+ +    
Sbjct: 420 LIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKN 479

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           ++P    Y T ++ +    N+     + + ME K + P  V+   +IKG C+   + EA+
Sbjct: 480 VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAI 539

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
             + +M  +G  PD+ TY T+I  + K  +L  A + L  M     +P   TY+ LI+G 
Sbjct: 540 LCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGY 599

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           C  GD  +A+ L  ++Q   +S   V YT +I +   +  V +A  +F  M+
Sbjct: 600 CKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETML 651



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 229/520 (44%), Gaps = 86/520 (16%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P  V+ N ++IDG C++  +   +L L E   K F P++V+  ++++   K G  E    
Sbjct: 237 PHVVFYN-VLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGS 295

Query: 120 LFCLMLKYGLHP-----------------------------------DAFSYNILIHGLC 144
           LF  M K GL P                                   D  ++N LI GLC
Sbjct: 296 LFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLC 355

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
             G + +A  F  +  R  + P+ ++Y+ L  GF +  ++  A  ++ +++ +G  PD+V
Sbjct: 356 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVV 415

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           T+  LI G    G V E L +RE M  +    +V  Y+VL+S +CK   +  A  +L EM
Sbjct: 416 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEM 475

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
               ++PD   Y+ LI G  + + +  A +++  M  K + P+  +  A++ G C+  M+
Sbjct: 476 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMM 535

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
           +EA +   ++    CI D   Y  +I GY K GN+  A++    +I+++  P++VT++SL
Sbjct: 536 SEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSL 595

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR------------- 431
           I G+CK G    A  L   ++   L P+ VTYT  + +  ++  + R             
Sbjct: 596 INGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHC 655

Query: 432 -------------------------------------LLALLQEMETKAIGPTHVTYTVV 454
                                                LL + +++      P +  Y  +
Sbjct: 656 SPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAI 715

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           I  LC+   L+EA+     M   G  P+ IT+ +++  FC
Sbjct: 716 IFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFC 755



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 195/470 (41%), Gaps = 90/470 (19%)

Query: 21  KMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQ 76
           +M++  L  ++Q YNS++  L      T  M  L         P ++ T + +I GLC +
Sbjct: 299 EMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDP-DIITFNTLITGLCHE 357

Query: 77  SRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSY 136
             ++ A  FL+E   +E  P+ +S   ++  +C  G    A  L   M+  G  PD  ++
Sbjct: 358 GHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTF 417

Query: 137 NILIHGLCIAGSMEEAL-----------------------------------EFTNDMGR 161
             LIHGL +AG + EAL                                       +M  
Sbjct: 418 GALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLE 477

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
             V+PD   Y+ L  GF     +  A K+ + +  KG  PDIV+   +I GYCQ G + E
Sbjct: 478 KNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSE 537

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            +     M   G   +   Y+ ++S   K G ++ AL  L +M     KP++VTYS LI 
Sbjct: 538 AILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLIN 597

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC-I 340
           G CK      A  L+  M ++ +SPN   +  ++  L +K+ +  A +YF+++++++C  
Sbjct: 598 GYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSP 657

Query: 341 QDVVL-------------------------------------------------YNIMID 351
            DV L                                                 YN +I 
Sbjct: 658 NDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIF 717

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
              +   + EA+    ++ +K   P+ +TF SL+YGFC  GK  + R +L
Sbjct: 718 SLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWRTIL 767



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 189/418 (45%), Gaps = 16/418 (3%)

Query: 243 VLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            L+++   +G + +A  +   + E  G  P++   + L++ L +Q +   A +LY+EM  
Sbjct: 138 ALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLG 197

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +    ++++   ++ GLC +  + E     ++   + CI  VV YN++IDGY + G++G 
Sbjct: 198 EDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGR 257

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            + L  ++  K   P++VT+ SLI    K G +     L   ++  GL P+   Y + ++
Sbjct: 258 GLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVID 317

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           A C+  +  + + +L++M      P  +T+  +I GLC +  +++A   L +     + P
Sbjct: 318 ALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNP 377

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +Q++Y  +I  FC   +L  A  LL +M      P   T+  LI GL V G +  A  + 
Sbjct: 378 NQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVR 437

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS-----------IRD 590
             + E  +      Y  +I   C +  +  A     +M+EK  +             IR 
Sbjct: 438 EKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRS 497

Query: 591 YT----KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                 +  F  M   G  PD   C  M+  + Q G +       + M K G +PD+F
Sbjct: 498 ENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEF 555



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 180/420 (42%), Gaps = 16/420 (3%)

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           +A+S LL  + +S R D     L  M   G  P       L+        + KA  +   
Sbjct: 99  LAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCER 158

Query: 299 MCSKRISPNSFAHGAILLGL-CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +  +  S     H   LL L  E+    +AR  +D ++  +   D     +++ G    G
Sbjct: 159 LREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEG 218

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + E ++L          P +V +N LI G+C+ G +     LL  ++  G  P+ VTY 
Sbjct: 219 RVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYG 278

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           + +N   ++G+++++ +L  EM  + + P    Y  VI  LCK W   +A+ +L+ M+  
Sbjct: 279 SLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFAS 338

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G  PD IT+NT+I   C    +RKA   L +     L P   +Y  LI G C+ G+L  A
Sbjct: 339 GCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAA 398

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF--EISIRDYTKSF 595
             LL+ +     +   V +  +I      G V +A+    +M E+    +++I +   S 
Sbjct: 399 SDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISG 458

Query: 596 FCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            C              ML     PD+ +   ++  F +  +LG   ++   M   G+ PD
Sbjct: 459 LCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPD 518



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 19/204 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           Y++ G ++ A+  +  M +   K ++ TY+SL+        TD    L+ +++      N
Sbjct: 564 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPN 623

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLN------------AIMSRYCK 110
           V T +I+I  L ++ ++  A L+ +        P+ V+L+             I S  C 
Sbjct: 624 VVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCN 683

Query: 111 LGFAEVAKGLFCLMLKYGLH---PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
                    L  +  K       P   +YN +I  LC    + EAL+F N M + G  P+
Sbjct: 684 TSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPN 743

Query: 168 AITYSILAKGFHLLSQISGAWKVI 191
            IT+  L  GF  + + S  W+ I
Sbjct: 744 PITFLSLLYGFCSVGK-SMNWRTI 766



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 44/239 (18%), Positives = 88/239 (36%), Gaps = 21/239 (8%)

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           +P+ + ++T +           +   LQ M      PT      ++        L +A  
Sbjct: 95  DPTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATD 154

Query: 470 LLEDMY-VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           + E +    G  P+    N +++   + +    A +L ++M   +    + +  +L+ GL
Sbjct: 155 MCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGL 214

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C+ G ++    L+ +          V Y  +I  +C  GD+ + +    +M  KGF  ++
Sbjct: 215 CLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTL 274

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             Y     C+                     + GDL  +  L   M K GL P+  + N
Sbjct: 275 VTYGSLINCL--------------------GKKGDLEKIGSLFLEMRKRGLSPNVQIYN 313


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 156/613 (25%), Positives = 288/613 (46%), Gaps = 34/613 (5%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN----LRHTDIMWDLYDDIKVS 57
           L   Y+ +G +  A+ +   ++E+         ++LL N        D+   LYD +  +
Sbjct: 136 LILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQT 195

Query: 58  ETPRNV----YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +         YT SI++ GLC   ++++    ++   GK   P VV  N I+  YCK G 
Sbjct: 196 DDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGD 255

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            + A      +   G+ P   +Y  LI+G C AG  E   +   +M   G+  +   ++ 
Sbjct: 256 LQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNN 315

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +    +    ++ A ++++++   G  PDI TY ++I   C+ G +EE  +L E    +G
Sbjct: 316 VIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERG 375

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              N  +Y+ L+ + CK G   +A G+L+ +  +G K DLV+Y   I G+    ++  A+
Sbjct: 376 LLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVAL 435

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            +  +M  K + P++  +  ++ GLC+K  I   ++    ++  N   DV ++  +IDG+
Sbjct: 436 MVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGF 495

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           ++ G + EA+++++ +I K + P IV +N++I GFCK GK+ DA   L+ +      P  
Sbjct: 496 IRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDE 555

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            TY+T ++ Y ++ ++   L +  +M      P  +TYT +I G CK+  +  A ++   
Sbjct: 556 YTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSG 615

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M    + P+ +TY T++  F K     +A  +   M ++   P  AT++ LI+GL     
Sbjct: 616 MKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLT---- 671

Query: 534 LKNADCLLVSLQEHNISLTK--------------------VAYTTIIKAHCAEGDVHKAM 573
             N     V ++E +    +                     AY ++I   C  G V  A 
Sbjct: 672 --NTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQ 729

Query: 574 TFFCQMVEKGFEI 586
               +M+ KGF I
Sbjct: 730 LLLTKMLTKGFLI 742



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/582 (25%), Positives = 265/582 (45%), Gaps = 37/582 (6%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY----GLHPDAFSYNILIHGLCIAGSMEE 151
           P+ V+ N +++   K G  +VA  L+  ML+     G   D ++ +I++ GLC  G +EE
Sbjct: 164 PTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEE 223

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
                         P  + Y+++  G+     +  A + + +L +KG  P + TY  LI 
Sbjct: 224 GRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALIN 283

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           G+C+ G  E   +L   M ++G  +NV  ++ ++ +  K G + EA  +L  M  +G  P
Sbjct: 284 GFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGP 343

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D+ TY+I+I   CK  ++ +A +L  +   + + PN F++  ++   C+K    +A    
Sbjct: 344 DITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGML 403

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             +       D+V Y   I G V  G I  A+ +  +++EK + P    +N L+ G CK 
Sbjct: 404 FRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKK 463

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G++   + LL  +    ++P    + T ++ +   G +   + + + +  K + P  V Y
Sbjct: 464 GRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGY 523

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             +IKG CK  K+ +A+  L +M  +   PD+ TY+T+I  + K  D+  A ++  QM  
Sbjct: 524 NAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMK 583

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
           H  +P   TY  LI+G C   D+  A+ +   ++  ++    V YTT++      G   +
Sbjct: 584 HKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPER 643

Query: 572 AMTFFCQMV-----------------------------EKGFEISIRDYTKSFFCMMLSN 602
           A + F  M+                             EK  + + R     FF MML +
Sbjct: 644 ATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLD 703

Query: 603 GFPPDQEIC--EVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           G+  DQ I     +++   + G + +   L   M+  G L D
Sbjct: 704 GW--DQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLID 743



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 133/536 (24%), Positives = 235/536 (43%), Gaps = 59/536 (11%)

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           L P   +++ LI     +GS++ AL+ F      H   P  +  ++L  G     ++  A
Sbjct: 126 LKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVA 185

Query: 188 WKVIQKLLIK----GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
            ++  K+L      G+  D  T ++++ G C +G +EEG +L +    +    +V+ Y++
Sbjct: 186 LQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNM 245

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++   CK G +  A   L E++  G+ P + TY  LI G CK  +     QL  EM ++ 
Sbjct: 246 IIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARG 305

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++ N      ++    +  ++TEA      +    C  D+  YNIMI+   K G I EA 
Sbjct: 306 LNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEAD 365

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK--------------LHGL 409
           +L  +  E+ + P+  ++  L++ +CK G    A  +L  I               +HG+
Sbjct: 366 ELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGV 425

Query: 410 E---------------------PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
                                 P A  Y   M+  C++G I  +  LL EM  + + P  
Sbjct: 426 VVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDV 485

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
             +  +I G  +  +L EA+++ + +   GV P  + YN +I+ FCK   +  A   LN+
Sbjct: 486 YVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNE 545

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M   +  P   TY+ +IDG     D+ +A  +   + +H      + YT++I   C + D
Sbjct: 546 MNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKAD 605

Query: 569 VHKAMTFFCQMVEKGFEI--SIRDYT---------------KSFFCMMLSNGFPPD 607
           + +A   F  M  K F++  ++  YT                S F +ML NG  P+
Sbjct: 606 MIRAEKVFSGM--KSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPN 659



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 195/449 (43%), Gaps = 22/449 (4%)

Query: 215 QIGNVEEGLKLREVMLSQGFK--LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           ++ + E GLK  +   ++ F   L+ +A+S LL  +       E   +L  M+A  LKP 
Sbjct: 70  RVHDAELGLKFFDWASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPT 129

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCS-KRISPNSFAHGAILLGLCEKEMITEARMYF 331
              +S LI    +   + +A+QL++ +       P   A   +L GL +   +  A   +
Sbjct: 130 REAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLY 189

Query: 332 DSLIMSN----CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           D ++ ++     + D    +IM+ G   LG I E  +L +    K   P +V +N +I G
Sbjct: 190 DKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDG 249

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           +CK G +  A R L+ +K+ G+ P+  TY   +N +C+ G  + +  LL EM  + +   
Sbjct: 250 YCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMN 309

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
              +  VI    K   + EA ++L  M  +G  PD  TYN +I   CK   + +A +LL 
Sbjct: 310 VKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLE 369

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +     L P   +Y  L+   C  GD   A  +L  + E       V+Y   I      G
Sbjct: 370 KAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAG 429

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICE 612
           ++  A+    +M+EKG     + Y                K     ML     PD  +  
Sbjct: 430 EIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFA 489

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            ++  F + G+L    ++  V+I+ G+ P
Sbjct: 490 TLIDGFIRNGELDEAIKIFKVIIRKGVDP 518



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 193/417 (46%), Gaps = 28/417 (6%)

Query: 255 DEALGLLYEMEAVGLKP-----DLVTYSILIRGLCKQDKVHKAIQLYNE-MCSKRISPNS 308
           D  LGL +  +    +P     D V +S L++ L    +V   I+L  E M ++ + P  
Sbjct: 73  DAELGLKF-FDWASTRPFSCSLDGVAHSSLLK-LLASYRVFPEIELVLENMKAQHLKPTR 130

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
            A  A++L   E   +  A   F ++  M NC    V  N++++G VK G +  A+QLY 
Sbjct: 131 EAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYD 190

Query: 368 QLIEKRISPSIV----TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           ++++       V    T + ++ G C  GK+ + RRL+         P  V Y   ++ Y
Sbjct: 191 KMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGY 250

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++G++Q     L E++ K + PT  TY  +I G CK  + +   QLL +M   G+  + 
Sbjct: 251 CKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNV 310

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
             +N +I +  K   + +A ++L +M      P   TYNI+I+  C  G ++ AD LL  
Sbjct: 311 KVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEK 370

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM----- 598
            +E  +   K +YT ++ A+C +GD  KA     ++ E G +  +  Y      +     
Sbjct: 371 AKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGE 430

Query: 599 ----------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                     M+  G  PD +I  +++    + G + ++  L + M+   + PD ++
Sbjct: 431 IDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYV 487



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/463 (22%), Positives = 198/463 (42%), Gaps = 86/463 (18%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T +I+I+  C+  R+++A   L++   +   P+  S   +M  YCK G    A G+ 
Sbjct: 344 DITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGML 403

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             + + G   D  SY   IHG+ +AG ++ AL     M   GV PDA  Y+IL  G    
Sbjct: 404 FRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKK 463

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I     ++ ++L +   PD+  +  LI G+ + G ++E +K+ +V++ +G    ++ Y
Sbjct: 464 GRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGY 523

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAV---------------------------------- 267
           + ++   CK G++ +AL  L EM +V                                  
Sbjct: 524 NAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMK 583

Query: 268 -GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
              KP+++TY+ LI G CK+  + +A ++++ M S  + PN   +  ++ G  +      
Sbjct: 584 HKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPER 643

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYV-------------------------------- 354
           A   F+ ++M+ C+ +   ++ +I+G                                  
Sbjct: 644 ATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLD 703

Query: 355 -----------------KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
                            K G +  A  L  +++ K      V F +L++G C  GK  + 
Sbjct: 704 GWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEW 763

Query: 398 RRLLDTIKLHGLE-PSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           R ++ +  L+ +E  +AV Y+  ++ Y  +G +     +LQ +
Sbjct: 764 RNII-SCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTL 805



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 120/272 (44%), Gaps = 25/272 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           + R G + +A+ +   +    +   I  YN+++       + TD +  L +   V   P 
Sbjct: 495 FIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAP- 553

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + YT S VIDG  +Q  +  A+    +    +F P+V++  ++++ +CK      A+ +F
Sbjct: 554 DEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVF 613

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M  + L P+  +Y  L+ G   AG  E A      M  +G  P+  T+  L  G   L
Sbjct: 614 SGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLING---L 670

Query: 182 SQISGAWKVIQK-----------------LLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
           +  + +  +I++                 +L+ G D  I  Y  +I   C+ G V+    
Sbjct: 671 TNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQL 730

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           L   ML++GF ++ + ++ LL  +C  G+  E
Sbjct: 731 LLTKMLTKGFLIDSVCFTALLHGLCHKGKSKE 762


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/563 (27%), Positives = 273/563 (48%), Gaps = 10/563 (1%)

Query: 9   TGMVHDAVFVIAKMKELD-------LKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSE 58
           T    +A+FV+  ++ ++        K++++ YN LL  L      D M  +Y ++    
Sbjct: 140 TDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDM 199

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              N++T + +++G C+   + +A L++ +           +  +++  YC+    + A 
Sbjct: 200 VTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAAN 259

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M   G   +  SY  LIHG C A  ++EAL+  + M      P   TY+++    
Sbjct: 260 AIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFAL 319

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             L + + A  + +++  K   P++ TYTVLIC  C+  N ++  K+   ML +G   +V
Sbjct: 320 CQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSV 379

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y+ L+   CK G    AL +L  ME+    P+  TY+ LI G C+   +HKA+ L ++
Sbjct: 380 VTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHK 439

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  +++ PN   +  ++ G C++  +  A      +  S  + D   Y++ ID   K G 
Sbjct: 440 MLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGL 499

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EA  L+  L EK I  + V +++LI G+CK GKV+D R LLD +   G  P+++TY +
Sbjct: 500 VEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNS 559

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++ YC+E N +    L+  M  + I P   TYT++I  L K  +  +A  + + M   G
Sbjct: 560 LIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTG 619

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
             PD   Y   I ++C    L+ A  L+ +M    + P +  Y + ID     G +  A 
Sbjct: 620 SHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAF 679

Query: 539 CLLVSLQEHNISLTKVAYTTIIK 561
            +L  + E     +   Y+ +IK
Sbjct: 680 GILKRMHEVGCEPSYYTYSCLIK 702



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 250/512 (48%), Gaps = 2/512 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P++ +LN +++ YCKLG    A+     +++ GL  D F+Y  LI G C   +++ A   
Sbjct: 202 PNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAI 261

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M   G   + ++Y+ L  GF    ++  A K+  ++      P + TYTV+I   CQ
Sbjct: 262 FLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQ 321

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +G   E L + + M  +  + NV  Y+VL+ S+C+    D+A  +L  M   GL P +VT
Sbjct: 322 LGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVT 381

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G CK+     A+++ + M S   SPN+  +  ++LG C  + I +A      ++
Sbjct: 382 YNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKML 441

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 +VV YNI+I G  K G++G A +L   + E  + P   T++  I   CK G V 
Sbjct: 442 ERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVE 501

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +AR L +++K  G++ + V Y+T ++ YC+ G +     LL +M +    P  +TY  +I
Sbjct: 502 EARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLI 561

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G CK+   +EA  L++ M    + P   TY  +I +  K  +  +A  + +QM      
Sbjct: 562 DGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSH 621

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P    Y   I   C +G LK+A+ L+  +    I    + YT  I A+   G +  A   
Sbjct: 622 PDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGI 681

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
             +M E G E S   YT S     LSN  P +
Sbjct: 682 LKRMHEVGCEPSY--YTYSCLIKHLSNAKPKE 711



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 227/466 (48%), Gaps = 39/466 (8%)

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           LE  +DM    V P+  T + +  G+  L  +  A   + K++  G   D  TYT LI G
Sbjct: 193 LEMLDDM----VTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILG 248

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           YC+  NV+    +   M ++G   N ++Y+ L+   C++ R+DEAL L  +M      P 
Sbjct: 249 YCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPT 308

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           + TY+++I  LC+  +  +A+ ++ EM  K   PN   +  ++  LCE     +A+   +
Sbjct: 309 VRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILN 368

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLG----------------------------------- 357
            ++    I  VV YN +IDGY K G                                   
Sbjct: 369 GMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGK 428

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           NI +A+ L  +++E+++ P++VT+N LI+G CK G +  A +LL  +   GL P   TY+
Sbjct: 429 NIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYS 488

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
            F++  C+ G ++   +L + ++ K I    V Y+ +I G CK  K+ +   LL+ M   
Sbjct: 489 VFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSA 548

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G  P+ ITYN++I  +CK K+ ++A  L++ M   ++EP + TY ILID L  + +   A
Sbjct: 549 GCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQA 608

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             +   +           YT  I A+C+ G +  A    C+M  KG
Sbjct: 609 HDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKG 654



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 166/632 (26%), Positives = 287/632 (45%), Gaps = 40/632 (6%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNS 67
           V +A+ + ++M E +   +++TY  +++ L    R T+ + +++ ++       NV+T +
Sbjct: 290 VDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEAL-NMFKEMTEKHCQPNVHTYT 348

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++I  LC+ S   DA   L     K   PSVV+ NA++  YCK G +  A  +  LM   
Sbjct: 349 VLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESN 408

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
              P+A +YN LI G C   ++ +A+   + M    ++P+ +TY+IL  G      +  A
Sbjct: 409 NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA 468

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           +K++  +   G  PD  TY+V I   C+ G VEE   L E +  +G K N + YS L+  
Sbjct: 469 YKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDG 528

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            CK G++ +   LL +M + G  P+ +TY+ LI G CK+    +A  L + M  + I P 
Sbjct: 529 YCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPA 588

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           +  +  ++  L + +   +A   FD ++ +    DV +Y   I  Y   G + +A  L  
Sbjct: 589 ADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLIC 648

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM----NAY 423
           ++  K I P  + +   I  + + G +  A  +L  +   G EPS  TY+  +    NA 
Sbjct: 649 KMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAK 708

Query: 424 CEE-------------------GNIQR------LLALLQEMETKAIGPTHVTYTVVIKGL 458
            +E                    N  R       L L  +M      P   TY   I GL
Sbjct: 709 PKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGL 768

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK   L+ A +L + M   G +P++  YN+++   C+     +A + L+ M  +   P  
Sbjct: 769 CKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHL 828

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            +  +L+ GL   G+ + A  +  S  +   +  ++ +  +I     +G   K    F  
Sbjct: 829 DSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGI 888

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEI 610
           M  +G +I  + Y+      ML  GF   QEI
Sbjct: 889 METQGCQIHPKTYS------MLIEGFDGIQEI 914



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 181/352 (51%)

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
           FKL +  Y++LL  + +   IDE   +  EM    + P++ T + ++ G CK   V +A 
Sbjct: 165 FKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAE 224

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
              +++    +S ++F + +++LG C  + +  A   F S+    C+++ V Y  +I G+
Sbjct: 225 LYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGF 284

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            +   + EA++L+ Q+ E    P++ T+  +I+  C+ G+  +A  +   +     +P+ 
Sbjct: 285 CEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNV 344

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            TYT  + + CE+ N      +L  M  K + P+ VTY  +I G CK+     A+++L  
Sbjct: 345 HTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSL 404

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M     +P+  TYN +I  FC+ K++ KA  LL++M    L+P   TYNILI G C  GD
Sbjct: 405 MESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGD 464

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           L +A  LL  + E  +   +  Y+  I   C  G V +A + F  + EKG +
Sbjct: 465 LGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIK 516



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 195/455 (42%), Gaps = 39/455 (8%)

Query: 232 QGFKLNVIAYSVLLSSMCKSG--RIDEALGLL----------------------YEMEAV 267
            GFK NV ++  +L+ +  +G  RI E + +L                        ++A 
Sbjct: 104 HGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAF 163

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
             K  L  Y++L+  L +   + +   +Y EM    ++PN F    ++ G C+   + EA
Sbjct: 164 KFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEA 223

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
            +Y   ++ +    D   Y  +I GY +  N+  A  ++  +  K    + V++ +LI+G
Sbjct: 224 ELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHG 283

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           FC+  +V +A +L   +      P+  TYT  + A C+ G     L + +EM  K   P 
Sbjct: 284 FCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPN 343

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TYTV+I  LC+     +A ++L  M   G+ P  +TYN +I  +CK      A ++L+
Sbjct: 344 VHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILS 403

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M  +N  P + TYN LI G C   ++  A  LL  + E  +    V Y  +I   C EG
Sbjct: 404 LMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEG 463

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICE 612
           D+  A      M E G       Y+               +S F  +   G   ++ I  
Sbjct: 464 DLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYS 523

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            ++  + + G +     L   M+ +G +P+    N
Sbjct: 524 TLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYN 558



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 181/422 (42%), Gaps = 15/422 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
           + G+V +A  +   +KE  +K +   Y++L+       + +D  + L   +     P ++
Sbjct: 496 KRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSI 555

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             NS+ IDG C++   ++A L +     ++  P+  +   ++    K    + A  +F  
Sbjct: 556 TYNSL-IDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQ 614

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           ML  G HPD F Y   IH  C  G +++A      M   G+ PD + Y++    +     
Sbjct: 615 MLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGS 674

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I GA+ +++++   G +P   TY+ LI     + N     K +EV  S          + 
Sbjct: 675 IDGAFGILKRMHEVGCEPSYYTYSCLIK---HLSNA----KPKEVSSSSELSDLSSGVAS 727

Query: 244 LLSSMCKSGRIDE--ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
              S C   R+D    L L  +M   G  P+  TY   I GLCK   +  A +L++ M  
Sbjct: 728 NDFSNCWR-RVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKE 786

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K  SPN   + ++L   C+  +  EA  + D +I +  +  +    +++ G    GN  +
Sbjct: 787 KGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEK 846

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +++   ++   +   + +  LI G  K G       L   ++  G +    TY+  + 
Sbjct: 847 AKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIE 906

Query: 422 AY 423
            +
Sbjct: 907 GF 908



 Score = 45.8 bits (107), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 9/244 (3%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPR 61
            Y R G +  A  ++ +M E+  + S  TY+ L   L N +  ++          S    
Sbjct: 668 AYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVAS 727

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N ++N        ++   +  +    + A     P+  +    ++  CK+G  EVA  LF
Sbjct: 728 NDFSNCW------RRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLF 781

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G  P+   YN L+   C  G   EA+ + + M  +   P   +  +L  G +  
Sbjct: 782 DHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDE 841

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
                A +V    L    + D + + VLI G  + G  ++   L  +M +QG +++   Y
Sbjct: 842 GNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTY 901

Query: 242 SVLL 245
           S+L+
Sbjct: 902 SMLI 905


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 217/398 (54%), Gaps = 6/398 (1%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
             + N ++   C  G    A  L   M +    P+A +YN +I G C  G ++ AL+   
Sbjct: 41  TTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMR 96

Query: 158 DMG-RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQ 215
           +M  R G+ P+  TY  +  G+  + ++  A KV  ++L KG   P+ V Y  LI GYC 
Sbjct: 97  EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 156

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G ++  L  R+ M+ +G  + V  Y++L+ ++   GR  EA  L+ EM   GL PD+ T
Sbjct: 157 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 216

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ILI G CK+  V KA++++  M  + +      + +++  L +K  + E    FD  +
Sbjct: 217 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 276

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D+VLYN +I+ +   GNI  A ++  ++ +KRI+P  VT+N+L+ G C  G+V 
Sbjct: 277 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 336

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +AR+L+D +   G++P  VTY T ++ Y  +G+++  L +  EM  K   PT +TY  +I
Sbjct: 337 EARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 396

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           +GLCK  +  +A  ++++M   G+TPD  TY ++I   
Sbjct: 397 QGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 217/452 (48%), Gaps = 41/452 (9%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  M +  L     ++NI++  LC AG    ALE    M R               
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR--------------- 69

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LREVMLSQGFK 235
                                   P+ VTY  +I G+C  G V+  L  +RE+    G  
Sbjct: 70  ------------------------PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIA 105

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG-LKPDLVTYSILIRGLCKQDKVHKAIQ 294
            N   Y  ++S  CK GR+DEA+ +  EM   G +KP+ V Y+ LI G C Q K+  A+ 
Sbjct: 106 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 165

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
             + M  + ++     +  ++  L      TEA    + +       DV  YNI+I+G+ 
Sbjct: 166 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 225

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K GN+ +A++++  +  + +  ++VT+ SLIY   K G+V +  +L D     G+ P  V
Sbjct: 226 KEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV 285

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            Y   +N++   GNI R   ++ EME K I P  VTY  +++GLC   ++ EA +L+++M
Sbjct: 286 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 345

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+ PD +TYNT+I  +    D++ A ++ N+M      PT  TYN LI GLC NG  
Sbjct: 346 TKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 405

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +A+ ++  + E+ I+     Y ++I+    E
Sbjct: 406 DDAENMVKEMVENGITPDDSTYISLIEGLTTE 437



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 221/416 (53%), Gaps = 7/416 (1%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           A  + A M  L L +   T+N +L +L          + ++    P N  T + VI G C
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRP-NAVTYNTVIAGFC 83

Query: 75  QQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LH 130
            + R+Q A+  ++E   +E G   P+  +   ++S +CK+G  + A  +F  ML  G + 
Sbjct: 84  SRGRVQAALDIMREM--RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK 141

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+A  YN LI G C  G ++ AL + + M   GV     TY++L     +  + + A+++
Sbjct: 142 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 201

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++++  KG  PD+ TY +LI G+C+ GNV++ L++ E M  +G +  V+ Y+ L+ ++ K
Sbjct: 202 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSK 261

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++ E   L  E    G++PDLV Y+ LI        + +A ++  EM  KRI+P+   
Sbjct: 262 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 321

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ GLC    + EAR   D +       D+V YN +I GY   G++ +A+++  +++
Sbjct: 322 YNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 381

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            K  +P+++T+N+LI G CKNG+  DA  ++  +  +G+ P   TY + +     E
Sbjct: 382 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 437



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 205/385 (53%), Gaps = 23/385 (5%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++++L  +C +G+   AL LL +M     +P+ VTY+ +I G C + +V  A+ +  EM 
Sbjct: 44  FNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMR 99

Query: 301 SKR-ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGN 358
            +  I+PN + +G ++ G C+   + EA   FD ++    ++ + V+YN +I GY   G 
Sbjct: 100 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 159

Query: 359 IGEAVQLYR-QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           +  A+ LYR +++E+ ++ ++ T+N L++    +G+  +A  L++ +   GL P   TY 
Sbjct: 160 LDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 218

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N +C+EGN+++ L + + M  + +  T VTYT +I  L K+ ++QE  +L ++    
Sbjct: 219 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 278

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD + YN +I S     ++ +AF+++ +M    + P   TYN L+ GLC+ G +  A
Sbjct: 279 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 338

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT----- 592
             L+  + +  I    V Y T+I  +  +GDV  A+    +M+ KGF  ++  Y      
Sbjct: 339 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 398

Query: 593 ----------KSFFCMMLSNGFPPD 607
                     ++    M+ NG  PD
Sbjct: 399 LCKNGQGDDAENMVKEMVENGITPD 423



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 190/383 (49%), Gaps = 6/383 (1%)

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
            T+ +++   C  G     L+L    L Q  + N + Y+ +++  C  GR+  AL ++ E
Sbjct: 42  TTFNIMLRHLCSAGKPARALEL----LRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMRE 97

Query: 264 M-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK-RISPNSFAHGAILLGLCEK 321
           M E  G+ P+  TY  +I G CK  +V +A+++++EM +K  + P +  + A++ G C++
Sbjct: 98  MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 157

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             +  A +Y D ++       V  YN+++      G   EA +L  ++  K ++P + T+
Sbjct: 158 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 217

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N LI G CK G V  A  + + +   G+  + VTYT+ + A  ++G +Q    L  E   
Sbjct: 218 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 277

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           + I P  V Y  +I        +  A +++ +M    + PD +TYNT++R  C    + +
Sbjct: 278 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 337

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A +L+++M    ++P   TYN LI G  + GD+K+A  +   +     + T + Y  +I+
Sbjct: 338 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 397

Query: 562 AHCAEGDVHKAMTFFCQMVEKGF 584
             C  G    A     +MVE G 
Sbjct: 398 GLCKNGQGDDAENMVKEMVENGI 420



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 160/287 (55%), Gaps = 5/287 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y   G +  A+    +M E  + +++ TYN L++ L    R T+  ++L +++       
Sbjct: 154 YCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA-YELVEEMGGKGLAP 212

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+T +I+I+G C++  ++ A+   +  + +    +VV+  +++    K G  +    LF
Sbjct: 213 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 272

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              ++ G+ PD   YN LI+    +G+++ A E   +M +  + PD +TY+ L +G  LL
Sbjct: 273 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 332

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A K+I ++  +G  PD+VTY  LI GY   G+V++ L++R  M+++GF   ++ Y
Sbjct: 333 GRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 392

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           + L+  +CK+G+ D+A  ++ EM   G+ PD  TY  LI GL  +D+
Sbjct: 393 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 186/415 (44%), Gaps = 30/415 (7%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M S    ++  +   LLS++  +     A  L  +M  + L     T++I++R LC   K
Sbjct: 1   MKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHLCSAGK 56

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-QDVVLYN 347
             +A++L  +M      PN+  +  ++ G C +  +  A      +     I  +   Y 
Sbjct: 57  PARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 112

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
            +I G+ K+G + EAV+++ +++ K  + P  V +N+LI G+C  GK+  A    D +  
Sbjct: 113 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 172

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+  +  TY   ++A   +G       L++EM  K + P   TY ++I G CK+  +++
Sbjct: 173 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 232

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A+++ E+M   GV    +TY ++I +  K   +++  +L ++     + P    YN LI+
Sbjct: 233 ALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 292

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
               +G++  A  ++  +++  I+   V Y T+++  C  G V +A     +M ++G   
Sbjct: 293 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRG--- 349

Query: 587 SIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                              PD      ++  +   GD+     +   M+  G  P
Sbjct: 350 -----------------IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 387



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 134/303 (44%), Gaps = 21/303 (6%)

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+  +   R+     TFN ++   C  GK A A  LL  +      P+AVTY T + 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 80

Query: 422 AYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-V 479
            +C  G +Q  L +++EM E   I P   TY  VI G CK  ++ EAV++ ++M   G V
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+ + YN +I  +C    L  A    ++M    +  T ATYN+L+  L ++G    A  
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------ 593
           L+  +    ++     Y  +I  HC EG+V KA+  F  M  +G   ++  YT       
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260

Query: 594 ---------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                      F   +  G  PD  +   ++ +    G++   FE+   M K  + PD  
Sbjct: 261 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 320

Query: 645 LIN 647
             N
Sbjct: 321 TYN 323



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 158/321 (49%), Gaps = 4/321 (1%)

Query: 6   YSRTGMVHDAVFVIAKM-KELDLKVSIQTYNSLL--YNLRHTDIMWDLYDDIKVSE-TPR 61
           + + G V +AV V  +M  + ++K     YN+L+  Y  +       LY D  V      
Sbjct: 118 WCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAM 177

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V T ++++  L    R  +A   ++E  GK   P V + N +++ +CK G  + A  +F
Sbjct: 178 TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 237

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+     +Y  LI+ L   G ++E  +  ++  R G+ PD + Y+ L       
Sbjct: 238 ENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 297

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             I  A++++ ++  K   PD VTY  L+ G C +G V+E  KL + M  +G + +++ Y
Sbjct: 298 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTY 357

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+S     G + +AL +  EM   G  P L+TY+ LI+GLCK  +   A  +  EM  
Sbjct: 358 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 417

Query: 302 KRISPNSFAHGAILLGLCEKE 322
             I+P+   + +++ GL  ++
Sbjct: 418 NGITPDDSTYISLIEGLTTED 438


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 150/544 (27%), Positives = 271/544 (49%), Gaps = 18/544 (3%)

Query: 57  SETPRNVYTNSIVIDGLCQQSRL------QDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           +E P N  T  IV   L ++ ++      ++ +  + + A  E  P+ + L  ++SR C+
Sbjct: 223 AEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCR 282

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
            G  + A  +   ++K G   +A S N L+  L  A   +       +M    ++P+ +T
Sbjct: 283 SGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVT 342

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGS-----DPDIVTYTVLICGYCQIGNVEEGLKL 225
           + IL        ++  A +V +K+    S     +PD++TY  LI G C++G  EEGL L
Sbjct: 343 FGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGL 402

Query: 226 REVMLSQGFKL-NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
            E M SQ   + N + Y+ L+   CK+  I+ A  L  +M   G+ P++VT + L+ G+C
Sbjct: 403 VERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMC 462

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K  +++ A++ +NEM  K +  N+  + A++   C    I +A   FD ++ + C  D +
Sbjct: 463 KHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAI 522

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           +Y  +I G  + G +  A  +  ++ E   SP IV+FN LI GFC+  K+ +A  +L  +
Sbjct: 523 VYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEM 582

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           +  G++P  VTY T ++ + + G+      L+++M  + + PT VTY  +I   C    L
Sbjct: 583 ENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNL 642

Query: 465 QEAVQLLEDMYVIG-VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
            EA+++  DM     V P+ + YN +I S C+   +  A  L++ M +  ++P + T+N 
Sbjct: 643 DEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNA 702

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +  GL     L  A  L+  + EH  +   +    + +   A G+  K  +F      +G
Sbjct: 703 MFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFV-----QG 757

Query: 584 FEIS 587
           +E+S
Sbjct: 758 YEVS 761



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 142/539 (26%), Positives = 250/539 (46%), Gaps = 36/539 (6%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVE--PDAITYSILAKGFHLLSQISGAWKVIQK- 193
           NILI  L   G +++AL   ++M +   E  P++ T  I+   F  LS+     + + + 
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIV---FSALSKRDKVGRAVDEE 252

Query: 194 ----LLIKGSD----PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
               L+ K ++    P+ +  T LI   C+ G  +    +   ++  G  +   + + LL
Sbjct: 253 EIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALL 312

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR-- 303
           +++ ++        LL EM+ + ++P++VT+ ILI  LCK  +V +A++++ +M      
Sbjct: 313 TALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESN 372

Query: 304 ---ISPNSFAHGAILLGLCEKEMITEARMYFDSL-IMSNCIQDVVLYNIMIDGYVKLGNI 359
              + P+   +  ++ GLC+     E     + +     C+ + V YN +IDGY K   I
Sbjct: 373 GFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMI 432

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A +L+ Q+ +  + P++VT N+L+ G CK+G++  A    + ++  GL+ +AVTYT  
Sbjct: 433 EAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTAL 492

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           + A+C   NI++ + L  EM      P  + Y  +I GL +  KL  A  +L  M   G 
Sbjct: 493 IRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGF 552

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +PD +++N +I  FC+   L +A+++L +M    ++P   TYN LI      GD   A  
Sbjct: 553 SPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHR 612

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG--------FEISIR-- 589
           L+  + +  +  T V Y  +I A+C  G++ +AM  F  M            + I I   
Sbjct: 613 LMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSL 672

Query: 590 ------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                 D   S    M   G  P+      M     +   L   FEL   M +    PD
Sbjct: 673 CRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPD 731



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 221/436 (50%), Gaps = 10/436 (2%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSET-----PRNVYTNSIV 69
           ++A+MKE+D++ ++ T+  L+ +L   R  D   ++++ +   E+       +V T + +
Sbjct: 327 LLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTL 386

Query: 70  IDGLCQQSRLQDAILFLQETAGKEF-GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           IDGLC+  R ++ +  ++    +    P+ V+ N ++  YCK    E A+ LF  M K G
Sbjct: 387 IDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDG 446

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + P+  + N L+ G+C  G +  A+EF N+M   G++ +A+TY+ L + F  ++ I  A 
Sbjct: 447 VPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAM 506

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++  ++L  G  PD + Y  LI G  Q G ++    +   M   GF  ++++++VL++  
Sbjct: 507 ELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGF 566

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C+  ++DEA  +L EME  G+KPD VTY+ LI    K      A +L  +M  + + P  
Sbjct: 567 CRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTV 626

Query: 309 FAHGAILLGLCEKEMITEA-RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
             +GA++   C    + EA +++ D    S    + V+YNI+I+   +   +  A+ L  
Sbjct: 627 VTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMD 686

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            +  K + P+  TFN++  G  +   ++ A  L+D +  H   P  +T           G
Sbjct: 687 DMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVG 746

Query: 428 NIQRLLALLQEMETKA 443
              +L + +Q  E  A
Sbjct: 747 ETAKLKSFVQGYEVSA 762



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 180/435 (41%), Gaps = 64/435 (14%)

Query: 242 SVLLSSMCKSGRIDEALGLLYEM--EAVGLKPDLVTYSILIRGLCKQDKVHKAIQ----- 294
           ++L+  + + GR+D+AL LL EM        P+  T  I+   L K+DKV +A+      
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255

Query: 295 -LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            L ++     + PNS     ++  LC       A              DV      + G 
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRA-------------WDV------LHGL 296

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           +KLG + EA                 + N+L+    +  +      LL  +K   ++P+ 
Sbjct: 297 MKLGGVMEAA----------------SCNALLTALGRAREFKRMNTLLAEMKEMDIQPNV 340

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEM---ETKA--IGPTHVTYTVVIKGLCKQWKLQEAV 468
           VT+   +N  C+   +   L + ++M   E+    + P  +TY  +I GLCK  + +E +
Sbjct: 341 VTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGL 400

Query: 469 QLLEDMYV-IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            L+E M       P+ +TYN +I  +CK   +  A +L +QM    + P   T N L+DG
Sbjct: 401 GLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDG 460

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG---- 583
           +C +G +  A      +Q   +    V YT +I+A C   ++ KAM  F +M+E G    
Sbjct: 461 MCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPD 520

Query: 584 -----------FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
                       +    D        M   GF PD     V++  F +   L   +E+  
Sbjct: 521 AIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLK 580

Query: 633 VMIKSGLLPDKFLIN 647
            M  +G+ PD    N
Sbjct: 581 EMENAGIKPDGVTYN 595


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 164/608 (26%), Positives = 280/608 (46%), Gaps = 16/608 (2%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           D+ DD   +    N+ T + +I   C+Q  L +A+   +E     F P VV+ ++I++  
Sbjct: 142 DMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGL 201

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK G    AK L   M K G++P+   Y IL+  L  AGS  E+  + + M   GV  D 
Sbjct: 202 CKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDL 261

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +  + L  G     +   A  +   L      P+ +TYT +I GYC++G+++    L   
Sbjct: 262 VVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRD 321

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M  +    NV+ YS +++   K G +D A+ ++ +M    + P+   Y+ LI G  K  K
Sbjct: 322 MEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGK 381

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
              A+ LYNEM    +  NSF   A +  L     + EA      ++    + D V Y  
Sbjct: 382 QDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTS 441

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           ++DG+ K G    A  +  ++ E  I   +V +N LI G  + GK  DA  +   I+  G
Sbjct: 442 LMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKY-DAESVYSGIRELG 500

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L P   TY T +NAYC++G ++  + L  EM+  ++ P  +T  +++ GL K  + + A+
Sbjct: 501 LAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAI 560

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            +L +M + G+ P+   +  ++ +  KC+      Q+  ++    L+     YN LI  L
Sbjct: 561 DVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVL 620

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C  G  K A  +L ++ +  IS   V Y  +I  H     + KA+  + QM+ +G    I
Sbjct: 621 CGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGI 680

Query: 589 RDY-------------TKSF--FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
           R Y             +K++     M  +G  PD  +   ++    + G+     +    
Sbjct: 681 RTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCE 740

Query: 634 MIKSGLLP 641
           M+  GL+P
Sbjct: 741 MVTKGLVP 748



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/616 (25%), Positives = 287/616 (46%), Gaps = 54/616 (8%)

Query: 30  SIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           ++  +N L+Y    T ++   WDLY ++       NV+T++I++   C+   L  A+  +
Sbjct: 10  TLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLI 69

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           +     +     V+ N  +  +C+ G A    G   +M+K     D+F+ NIL+ G C  
Sbjct: 70  RNV---DIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRI 126

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           GS++   E+  D     +  D  T ++                          +P++VTY
Sbjct: 127 GSVKYG-EWVMDNLIDDMNDDDGTTNL--------------------------EPNLVTY 159

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T LI  YC+   + E L L E M+S GF  +V+ YS +++ +CK G + EA  LL EM+ 
Sbjct: 160 TTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDK 219

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           +G+ P+ V Y+IL+  L K     ++    ++M    +S +      ++ GL +     E
Sbjct: 220 MGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDE 279

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A   F +L   NCI + + Y  MIDGY KLG++  A  L R + +K++ P++VT++S+I 
Sbjct: 280 AEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIIN 339

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G+ K G +  A R++  +    + P+A  Y T ++ + + G     + L  EM+   +  
Sbjct: 340 GYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEE 399

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
                   I  L +  K++EA  L + M   G+  D++ Y +++  F K      AF + 
Sbjct: 400 NSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMA 459

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +M    ++     YN+LI+GL   G   +A+ +   ++E  ++  +  Y T+I A+C +
Sbjct: 460 EKMAETGIKFDVVAYNVLINGLLRLGKY-DAESVYSGIRELGLAPDRATYNTMINAYCKQ 518

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
           G +  A+  + +M  KG  +                   P+   C +++    + G+   
Sbjct: 519 GKLENAIKLWNEM--KGHSVM------------------PNSITCNILVGGLSKAGETER 558

Query: 627 VFELAAVMIKSGLLPD 642
             ++   M+  G+ P+
Sbjct: 559 AIDVLNEMLLWGICPN 574



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/542 (26%), Positives = 259/542 (47%), Gaps = 14/542 (2%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           K++  P N+ T + +IDG C+   +  A   L++   K+  P+VV+ ++I++ Y K G  
Sbjct: 289 KLNCIPNNI-TYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGML 347

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           +VA  +   ML   + P+A+ Y  LI G   AG  + A++  N+M  +G+E ++      
Sbjct: 348 DVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAF 407

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
                   ++  A  + + ++ KG   D V YT L+ G+ + G       + E M   G 
Sbjct: 408 INNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGI 467

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           K +V+AY+VL++ + + G+ D A  +   +  +GL PD  TY+ +I   CKQ K+  AI+
Sbjct: 468 KFDVVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIK 526

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L+NEM    + PNS     ++ GL +      A    + +++     +V ++  +++   
Sbjct: 527 LWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACS 586

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K       +Q++++L+   +  +   +NSLI   C  G    A  +L+ +   G+    V
Sbjct: 587 KCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTV 646

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TY   ++ + +  +I++ LA   +M  + + P   TY +++ GL     + +A ++L  M
Sbjct: 647 TYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKM 706

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+ PD   YNT+I    K  + ++A +   +M    L P ++TYN+LI+     G +
Sbjct: 707 KDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKM 766

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHC-----AEGD-------VHKAMTFFCQMVEK 582
             A  LL  +Q   +      Y  +I   C      E D         +A T F +M EK
Sbjct: 767 DQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEK 826

Query: 583 GF 584
           GF
Sbjct: 827 GF 828



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 131/544 (24%), Positives = 234/544 (43%), Gaps = 62/544 (11%)

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
           H + P    ++ L   F+    +S  W +  ++L  G  P++ T+ +L+  +C++G++  
Sbjct: 5   HHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSL 64

Query: 222 GLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM---------------- 264
            L L R V       ++ + Y+  +   C+ G  ++  G L  M                
Sbjct: 65  ALDLIRNV----DIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILV 120

Query: 265 ---------------------------EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
                                          L+P+LVTY+ LI   CKQ  + +A+ LY 
Sbjct: 121 KGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYE 180

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM S    P+   + +I+ GLC++ M+TEA+     +       + V+Y I++D   K G
Sbjct: 181 EMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAG 240

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           +  E+     Q+I   +S  +V   +LI G  K GK  +A  +  T+      P+ +TYT
Sbjct: 241 SAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYT 300

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++ YC+ G++    +LL++ME K + P  VTY+ +I G  K+  L  AV++++ M   
Sbjct: 301 AMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQ 360

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
            + P+   Y T+I    K      A  L N+M L+ LE  S   +  I+ L     ++ A
Sbjct: 361 NIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEA 420

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT----- 592
           + L   +    + L +V YT+++      G    A T   +M E G +  +  Y      
Sbjct: 421 EGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLING 480

Query: 593 ---------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                    +S +  +   G  PD+     M+ A+ + G L +  +L   M    ++P+ 
Sbjct: 481 LLRLGKYDAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNS 540

Query: 644 FLIN 647
              N
Sbjct: 541 ITCN 544



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 240/522 (45%), Gaps = 55/522 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           Y++ GM+  AV ++ KM + ++  +   Y +L+         D   DLY+++K++    N
Sbjct: 341 YTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEEN 400

Query: 63  -----VYTNSI------------------------------VIDGLCQQSRLQDAILFLQ 87
                 + N++                              ++DG  +  R   A    +
Sbjct: 401 SFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAE 460

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           + A       VV+ N +++   +LG  + A+ ++  + + GL PD  +YN +I+  C  G
Sbjct: 461 KMAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQG 519

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            +E A++  N+M  H V P++IT +IL  G     +   A  V+ ++L+ G  P++  + 
Sbjct: 520 KLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHR 579

Query: 208 VLI--CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
            L+  C  C+    +  L++ + ++  G K N   Y+ L++ +C  G    A  +L  M 
Sbjct: 580 ALLNACSKCE--RADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMT 637

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G+  D VTY+ LI G  K   + KA+  Y +M ++ +SP    +  +L GL    +++
Sbjct: 638 KEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMS 697

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +A      +  S    D  LYN +I G+ K+GN  EA++ Y +++ K + P   T+N LI
Sbjct: 698 KAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLI 757

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC---EEGNIQRL---------L 433
             F K GK+  AR LL+ +++  + P++ TY   +  +C   ++  + R+          
Sbjct: 758 EDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEAR 817

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
            L  EM  K   P   T   +     +   + +A  +L+DMY
Sbjct: 818 TLFAEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKDMY 859


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 164/568 (28%), Positives = 274/568 (48%), Gaps = 38/568 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y + G + DA+ V  +M ++ LK+++   NSL+        + +   L   ++  +   +
Sbjct: 182 YCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPD 241

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            Y+   ++DG C+      A     +   K   P+VV+ N ++   C+ G  + A  L+ 
Sbjct: 242 SYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWH 301

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           LML+ G+ P+   Y  L+ GL   G    AL   +D+   G+      ++ +  G   + 
Sbjct: 302 LMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMG 361

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++ GA +  +++   G  PD +TY  L  GYC++GNVEE  K++E M  +    ++  Y+
Sbjct: 362 EMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYN 421

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +  S +I + + LL EM+  GL P++VTY  LI G C Q ++ KA   Y EM  K
Sbjct: 422 SLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGK 481

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMY------FDSLIMSNCIQDV------------- 343
             +PN      I+  L     I EA M       FD ++   C++D              
Sbjct: 482 GFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKI 541

Query: 344 ----------------VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                           V+YNI + G  K G + +A + +  L     +P   T+ +LI+G
Sbjct: 542 ADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHG 601

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           F   G V +A  L D +   GL P+  TY   +N  C+ G + R   L  ++  K + P 
Sbjct: 602 FSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPN 661

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            VTY ++I G CK    +EA+ L   M   G++P  ITY+++I  FCK  D+ +A +LLN
Sbjct: 662 VVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLN 721

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLK 535
           +M   N++ T AT++ L++G   +GD+K
Sbjct: 722 EMKASNVDQTIATFSKLVEGCIQHGDVK 749



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 153/578 (26%), Positives = 261/578 (45%), Gaps = 70/578 (12%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           Y    +IDG C+  ++ DAI    E        ++   N++++ YCK G     + L   
Sbjct: 173 YAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMC 232

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M K  L PD++SY  L+ G C  G   +A    + M R G+EP  +TY+ L KG      
Sbjct: 233 MRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGD 292

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A ++   +L +G  P+ V Y  L+ G  ++G+    L L + +L++G   ++ A++ 
Sbjct: 293 YKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNT 352

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA----------- 292
           +++ +CK G +D A      ME +G KPD +TY  L  G CK   V +A           
Sbjct: 353 MINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEE 412

Query: 293 ----IQLYN--------------------EMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
               I++YN                    EM ++ +SPN   +GA++ G C++  + +A 
Sbjct: 413 IFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAF 472

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE----------------- 371
             +  +I      +V++ + ++    +LG I EA  L +++++                 
Sbjct: 473 SAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNAD 532

Query: 372 ------------------KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
                             K   P+ V +N  + G CK+GKV DARR    +      P  
Sbjct: 533 IRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDN 592

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            TY T ++ +   G +     L  EM  K + P   TY  ++ GLCK   L  A +L + 
Sbjct: 593 FTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDK 652

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           +++ G+ P+ +TYN +I  +CK    R+A  L  +M    + P+  TY+ LI+G C   D
Sbjct: 653 LHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSD 712

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
           ++ A  LL  ++  N+  T   ++ +++     GDV K
Sbjct: 713 VEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKK 750



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 174/695 (25%), Positives = 318/695 (45%), Gaps = 54/695 (7%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVS 57
           M+  VY+  GMV +A+ V   M +   K S+++ NSLL NL      +    +YD ++  
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           +   +V+T +I+++  C+  +++ A+ F++E     F  + VS N+++  Y  LG  E A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH-GVEPDAITYSILAK 176
           KG+   M + G+  +  +  +LI G C    +EEA +   +M +  GV  D   Y  L  
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+  + ++  A +V  ++L  G   ++     LI GYC+ G V EG +L   M     K 
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +  +Y  L+   C+ G   +A  +  +M   G++P +VTY+ L++GLC+      A++L+
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           + M  + ++PN   +  +L GL +    + A   +D ++     + +  +N MI+G  K+
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKM 360

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G +  A + ++++ E    P  +T+ +L  G+CK G V +A ++ + ++   + PS   Y
Sbjct: 361 GEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMY 420

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            + +        I +L+ LL EM+T+ + P  VTY  +I G C Q +L +A     +M  
Sbjct: 421 NSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIG 480

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE--------------------- 515
            G  P+ I  + I+ S  +   + +A  LL +M   +L                      
Sbjct: 481 KGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWK 540

Query: 516 --------------PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
                         P +  YNI + GLC +G + +A    + L   + +     Y T+I 
Sbjct: 541 IADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIH 600

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPP 606
              A G V++A     +MV KG   +I  Y                +  F  +   G  P
Sbjct: 601 GFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIP 660

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           +     +++  + + G      +L   M+K G+ P
Sbjct: 661 NVVTYNILIDGYCKSGSPREALDLRGKMLKEGISP 695



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/512 (29%), Positives = 250/512 (48%), Gaps = 9/512 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI-----MWDLYDDIKVSET 59
           Y R G+   A  V  +M    ++ ++ TYN+LL  L R  D      +W L   ++   T
Sbjct: 252 YCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLM--LQRGVT 309

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P  V     ++DGL +      A+    +   +    S+ + N +++  CK+G  + AK 
Sbjct: 310 PNEV-GYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKE 368

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
            F  M + G  PD  +Y  L  G C  G++EEA +    M +  + P    Y+ L  G  
Sbjct: 369 TFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLF 428

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +IS    ++ ++  +G  P++VTY  LI G+C  G +++       M+ +GF  NVI
Sbjct: 429 TSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVI 488

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
             S ++SS+ + GRIDEA  LL +M    L  D            ++    K     +E 
Sbjct: 489 ICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDES 548

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K   PN+  +   + GLC+   + +AR +F  L   +   D   Y  +I G+   G +
Sbjct: 549 AIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYV 608

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA  L  +++ K + P+I T+N+L+ G CK+G +  ARRL D + L GL P+ VTY   
Sbjct: 609 NEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNIL 668

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ YC+ G+ +  L L  +M  + I P+ +TY+ +I G CKQ  ++EA++LL +M    V
Sbjct: 669 IDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNV 728

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
                T++ ++    +  D++K  +L N M +
Sbjct: 729 DQTIATFSKLVEGCIQHGDVKKMSKLHNMMHM 760


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 236/477 (49%), Gaps = 31/477 (6%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+  +        C+LG A+ A  L   M ++G  PDA  Y  +IH LC  G + EA   
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            N+M   G   D  T+  + +G   L ++  A +++ +++ KG  P ++TY  L+ G C+
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276

Query: 216 I-------------------------------GNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           +                               G + E  +L E M  +G + +   YS+L
Sbjct: 277 VRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 336

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +CK GRI  A+ LL EME  G  P++VTY+I++   CK         L  EM +K +
Sbjct: 337 MHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 396

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           + NS  +  ++  LC+   + EA      +    C  D+  YN +I        + EA  
Sbjct: 397 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 456

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           ++  L+E+ +  + +T+N++I+   ++G+  DA RL   + LHG     V+Y   + A C
Sbjct: 457 MFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 516

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           ++GN+ R L LL+EM  K I P +V+Y ++I  LCK+ ++++A++L + M   G+ PD +
Sbjct: 517 KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIV 576

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           TYNT+I   CK   +  A  LL ++   N+ P   TYNILI   C    L +A  LL
Sbjct: 577 TYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 633



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 235/486 (48%), Gaps = 31/486 (6%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +     P   +T  +    LC+  R  +A+  L+  A     P  V    ++   C  G 
Sbjct: 150 VHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGG 209

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A  L   ML  G   D  +++ ++ G+C  G + EA    + M   G  P  +TY  
Sbjct: 210 VTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGF 269

Query: 174 LAKGFHLLSQ-------------------------------ISGAWKVIQKLLIKGSDPD 202
           L +G   + Q                               ++ A ++ + + +KG  PD
Sbjct: 270 LLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPD 329

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
             TY++L+ G C++G +   ++L   M  +GF  NV+ Y+++L S CK+G  D+   LL 
Sbjct: 330 AHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLE 389

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           EM A GL  +   Y+ +I  LCK  ++ +A+ L  EM S+  +P+  ++  I+  LC  E
Sbjct: 390 EMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 449

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            + EA   F++L+    + + + YN +I   ++ G   +AV+L +++I    S  +V++N
Sbjct: 450 QMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN 509

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
            LI   CK+G V  +  LL+ +   G++P+ V+Y   ++  C+E  ++  L L ++M  +
Sbjct: 510 GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ 569

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P  VTY  +I GLCK   +  A+ LLE ++   V PD ITYN +I   CK + L  A
Sbjct: 570 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 629

Query: 503 FQLLNQ 508
             LLN+
Sbjct: 630 AMLLNR 635



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 209/432 (48%), Gaps = 4/432 (0%)

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
           R  V P   T+ + A+    L +   A  +++ +   G  PD V Y  +I   C  G V 
Sbjct: 152 RDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVT 211

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
           E   L   ML  G   +V  +  ++  MC  GR+ EA  L+  M   G  P ++TY  L+
Sbjct: 212 EAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 271

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
           +GLC+  +  +A      M  +    N      ++ G   +  + EA   ++++ +  C 
Sbjct: 272 QGLCRVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQ 327

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            D   Y+I++ G  KLG IG AV+L R++ +K  +P++VT+  +++ FCKNG   D R L
Sbjct: 328 PDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL 387

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L+ +   GL  ++  Y   + A C++G +   + L+QEM ++   P   +Y  +I  LC 
Sbjct: 388 LEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCN 447

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             +++EA  + E++   GV  + ITYNTII +  +    + A +L  +M LH       +
Sbjct: 448 NEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVS 507

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           YN LI  +C +G++  +  LL  + E  I    V+Y  +I   C E  V  A+    QM+
Sbjct: 508 YNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQML 567

Query: 581 EKGFEISIRDYT 592
            +G    I  Y 
Sbjct: 568 NQGLAPDIVTYN 579



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 239/537 (44%), Gaps = 61/537 (11%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P  F++ +    LC  G  +EAL     M RHG  PDA+ Y  +         ++ A  +
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           + ++L+ G   D+ T+  ++ G C +G V E  +L + M+++G    V+ Y  LL  +C+
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             + DEA  +L  +  +    ++V ++ +I G   + K+ +A +LY  M  K   P++  
Sbjct: 277 VRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHT 332

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ GLC+   I  A      +       +VV Y I++  + K G   +   L  ++ 
Sbjct: 333 YSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 392

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP------------------- 411
            K ++ +   +N +IY  CK+G++ +A  L+  ++  G  P                   
Sbjct: 393 AKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQME 452

Query: 412 ----------------SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
                           + +TY T ++A   +G  Q  + L +EM         V+Y  +I
Sbjct: 453 EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLI 512

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           K +CK   +  ++ LLE+M   G+ P+ ++YN +I   CK + +R A +L  QM    L 
Sbjct: 513 KAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLA 572

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC-------AEGD 568
           P   TYN LI+GLC  G +  A  LL  L   N+    + Y  +I  HC       A   
Sbjct: 573 PDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAML 632

Query: 569 VHKAMTFFCQ---------MVEKGFEISIR----DYTKSFFCMMLSNGFPPDQEICE 612
           +++AM   C          + +K F++ +     D+  S  C+  S   P  ++ CE
Sbjct: 633 LNRAMAAVCPVGDRRIMQILPDKNFKLYLHTKGDDFQHSLGCVKPS--CPAGKDRCE 687



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 184/356 (51%), Gaps = 39/356 (10%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +LY+ + +     + +T SI++ GLC+  R+  A+  L+E   K F P+VV+   ++  +
Sbjct: 316 ELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSF 375

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK G  +  + L   M   GL  ++  YN +I+ LC  G M+EA+    +M   G  PD 
Sbjct: 376 CKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDI 435

Query: 169 ITYSILAKGFHLLS--QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
            +Y+ +   +HL +  Q+  A  + + LL +G   + +TY  +I    + G  ++ ++L 
Sbjct: 436 CSYNTII--YHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLA 493

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           + M+  G  L+V++Y+ L+ +MCK G +D +L LL EM   G+KP+ V+Y+ILI  LCK+
Sbjct: 494 KEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKE 553

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            +V  A++L  +M ++ ++P                                   D+V Y
Sbjct: 554 RRVRDALELSKQMLNQGLAP-----------------------------------DIVTY 578

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           N +I+G  K+G +  A+ L  +L  + + P I+T+N LI   CK   + DA  LL+
Sbjct: 579 NTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLN 634



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 137/293 (46%), Gaps = 32/293 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + + GM  D   ++ +M    L ++ Q YN ++Y                          
Sbjct: 375 FCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY-------------------------- 408

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
                  LC+  R+ +A+  +QE   +   P + S N I+   C     E A+ +F  +L
Sbjct: 409 ------ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL 462

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G+  +  +YN +IH L   G  ++A+    +M  HG   D ++Y+ L K       + 
Sbjct: 463 EEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVD 522

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            +  +++++  KG  P+ V+Y +LI   C+   V + L+L + ML+QG   +++ Y+ L+
Sbjct: 523 RSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLI 582

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + +CK G +  AL LL ++    + PD++TY+ILI   CK   +  A  L N 
Sbjct: 583 NGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 635



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 127/302 (42%), Gaps = 49/302 (16%)

Query: 365 LYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           LYR+++ + R+ P+  TF       C+ G+  +A  LL  +  HG  P AV Y T ++A 
Sbjct: 145 LYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHAL 204

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++G +     LL EM          T+  V++G+C   +++EA +L++ M   G  P  
Sbjct: 205 CDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGV 264

Query: 484 ITYNTIIRSFCKCKD-------------------------------LRKAFQLLNQMWLH 512
           +TY  +++  C+ +                                L +A +L   M L 
Sbjct: 265 MTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLK 324

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
             +P + TY+IL+ GLC  G + +A  LL  +++   +   V YT ++ + C  G     
Sbjct: 325 GCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT 384

Query: 573 MTFFCQMVEKGFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVMLIA 617
                +M  KG  ++ + Y    + +               M S G  PD  IC    I 
Sbjct: 385 RALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPD--ICSYNTII 442

Query: 618 FH 619
           +H
Sbjct: 443 YH 444



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 3/216 (1%)

Query: 4   FVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETP 60
           +   + G + +A+ +I +M+       I +YN+++Y+L + + M +   +++++      
Sbjct: 408 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 467

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N  T + +I  L +  R QDA+   +E         VVS N ++   CK G  + +  L
Sbjct: 468 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 527

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M + G+ P+  SYNILI  LC    + +ALE +  M   G+ PD +TY+ L  G   
Sbjct: 528 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 587

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           +  +  A  +++KL  +   PDI+TY +LI  +C++
Sbjct: 588 MGWMHAALNLLEKLHNENVHPDIITYNILISWHCKV 623



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 27/256 (10%)

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G  +  + A  RR++   ++    P+  T+     A C  G     LALL+ M      P
Sbjct: 136 GLPRARRFALYRRMVHRDRV---PPTTFTFGVAARALCRLGRADEALALLRGMARHGCVP 192

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             V Y  VI  LC Q  + EA  LL +M ++G   D  T++ ++R  C    +R+A +L+
Sbjct: 193 DAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLV 252

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           ++M      P   TY  L+ GLC       A  +L  + E N+    V + T+I    AE
Sbjct: 253 DRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNV----VLFNTVIGGCLAE 308

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
           G + +A   +  M  KG +                    PD     +++    + G +GS
Sbjct: 309 GKLAEATELYETMGLKGCQ--------------------PDAHTYSILMHGLCKLGRIGS 348

Query: 627 VFELAAVMIKSGLLPD 642
              L   M K G  P+
Sbjct: 349 AVRLLREMEKKGFAPN 364


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/554 (27%), Positives = 261/554 (47%), Gaps = 42/554 (7%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P  + YN+L+      G ++       DM   GV P+  T+++L         +  A ++
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
             K+  KG +P+  ++ +L+ GYC+ G   +GL+L   M   GF  N + Y+ L+SS CK
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI----SP 306
            G+ D+A  L+ EM   GL PD+VT++  I  LC   KV +A +++ +M    +     P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N   +  +L G C++ M+ EAR  F+ + +S  + +   YNI + G V++G + EA  + 
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           +++++  + P++ ++N ++ G CKNG + DAR L+  +   G+ P  VTYTT ++ YC  
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +     +L+EM      P + T  +++  L K+ ++ EA +LL+ M   G   D +T 
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 378

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLH------NLE-----------------PTSATYNI 523
           N +I   C    L KA +++N MW H      NL                  P   +Y+ 
Sbjct: 379 NIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYST 438

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +I GLC  G +  A    + +   N+      Y   I + C EG +  A      M +KG
Sbjct: 439 IISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKG 498

Query: 584 FEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
              +++ Y      +               M   G  PD  I   +L +  +GG +    
Sbjct: 499 CNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAP 558

Query: 629 ELAAVMIKSGLLPD 642
            +   M++ G+ P+
Sbjct: 559 SVLDEMLQKGISPN 572



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/565 (25%), Positives = 261/565 (46%), Gaps = 27/565 (4%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           +  E P ++Y  ++++    ++ R+       ++       P   + N ++   C  G  
Sbjct: 13  RFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCL 72

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           + A+ LF  M + G  P+ +S+ IL+ G C AG   + LE   +M R G  P+ + Y+ L
Sbjct: 73  DDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTL 132

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQG 233
              F    +   A K++ ++   G  PD+VT+   I   C  G V E  ++ R++ + + 
Sbjct: 133 ISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEV 192

Query: 234 FKL---NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
             L   N+I Y+++L   CK G ++EA  L  +M+      +  +Y+I + GL +  K+ 
Sbjct: 193 LGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLL 252

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A  +  EM    + PN +++  ++ GLC+  ++ +ARM    +  S  + D V Y  ++
Sbjct: 253 EAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLL 312

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            GY   G + EA  + R+++    SP+  T N L+Y   K G++++A  LL  +   G  
Sbjct: 313 HGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYV 372

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMET---KAIG--------------------PT 447
              VT    ++  C  G + + + ++  M T    A+G                    P 
Sbjct: 373 IDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPD 432

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            ++Y+ +I GLCK  ++ EA +   +M    + PD   Y+  I SFCK   +  AF++L 
Sbjct: 433 LISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLK 492

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M       T  TYN LI GL     +     L+  ++E  +S     Y  ++ + C  G
Sbjct: 493 DMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGG 552

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT 592
            V  A +   +M++KG   +I  ++
Sbjct: 553 RVKDAPSVLDEMLQKGISPNISSFS 577



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 155/593 (26%), Positives = 287/593 (48%), Gaps = 39/593 (6%)

Query: 29  VSIQTYN-----SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAI 83
           VS +TY       LL +    D   +L+D +       N Y+  I++ G C+       +
Sbjct: 52  VSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGL 111

Query: 84  LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGL 143
             L E     F P+ V  N ++S +CK G  + A+ L   M K GL PD  ++N  I  L
Sbjct: 112 ELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISAL 171

Query: 144 CIAGSMEEALEFTNDMGRHGV----EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           C +G + EA     DM    V    +P+ ITY+++  GF     +  A  + +K+ +  +
Sbjct: 172 CSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSEN 231

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
             +  +Y + + G  +IG + E   + + M+  G + NV +Y++++  +CK+G + +A  
Sbjct: 232 LMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARM 291

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           L+  M + G+ PD VTY+ L+ G C   KV +A  +  EM     SPN++    +L  L 
Sbjct: 292 LMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLW 351

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL-------------- 365
           ++  I+EA      +     + D V  NI+IDG    G + +A+++              
Sbjct: 352 KEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGN 411

Query: 366 ----YRQLIE-----KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
               Y  L++     K+  P +++++++I G CK G+V +A++    +    L+P +  Y
Sbjct: 412 LGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIY 471

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
             F++++C+EG I     +L++ME K    T  TY  +I GL  + ++ E   L+++M  
Sbjct: 472 DVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRE 531

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            GV+PD   YN ++ S C+   ++ A  +L++M    + P  ++++ILI   C   D   
Sbjct: 532 RGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSA 591

Query: 537 ADCLL---VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
            D +    +++  H  +L  + +  ++      G+V KA   F   +++ F++
Sbjct: 592 VDEIFEIALNVCGHKEALYSLTFNELLVG----GEVVKAKELFETALDRSFDV 640



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 151/585 (25%), Positives = 279/585 (47%), Gaps = 42/585 (7%)

Query: 93  EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           E  PS+   N ++    K G  +    L   M+  G+ P+ +++N+LI  LC +G +++A
Sbjct: 16  ENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDA 75

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
            E  + M   G EP+  ++ IL +G+      S   +++ ++   G  P+ V Y  LI  
Sbjct: 76  RELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISS 135

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM---EAVGL 269
           +C+ G  ++  KL + M   G   +V+ ++  +S++C SG++ EA  +  +M   E +GL
Sbjct: 136 FCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGL 195

Query: 270 -KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
            +P+++TY++++ G CK+  + +A  L+ +M       N  ++   LLGL     + EA+
Sbjct: 196 PQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQ 255

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
           +    ++      +V  YNI++DG  K G + +A  L R +    + P  VT+ +L++G+
Sbjct: 256 LVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGY 315

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C  GKV++A  +L  +   G  P+  T    + +  +EG I     LLQ+M  K      
Sbjct: 316 CHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDT 375

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT-----------------------PDQIT 485
           VT  +VI GLC   KL +A++++  M+  G                         PD I+
Sbjct: 376 VTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLIS 435

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           Y+TII   CK   + +A +   +M   NL+P SA Y++ I   C  G + +A  +L  ++
Sbjct: 436 YSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDME 495

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF--EISIRDYTKSFFC------ 597
           +   + T   Y ++I    ++  + +      +M E+G   ++SI +   S  C      
Sbjct: 496 KKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVK 555

Query: 598 -------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
                   ML  G  P+     +++ AF +  D  +V E+  + +
Sbjct: 556 DAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIAL 600



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 160/626 (25%), Positives = 280/626 (44%), Gaps = 53/626 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y R G     + ++ +M+ L    +   YN+L+ +      TD    L D+++      +
Sbjct: 101 YCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPD 160

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEF----GPSVVSLNAIMSRYCKLGFAEVAK 118
           V T +  I  LC   ++ +A    ++    E      P++++ N ++  +CK G  E A+
Sbjct: 161 VVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEAR 220

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            LF  M       +  SYNI + GL   G + EA     +M   G+EP+  +Y+I+  G 
Sbjct: 221 ALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGL 280

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +  A  +++ +   G  PD VTYT L+ GYC  G V E   +   M+  G   N 
Sbjct: 281 CKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNN 340

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
              ++LL S+ K GRI EA  LL +M   G   D VT +I+I GLC   K+ KAI++ N 
Sbjct: 341 YTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNG 400

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M         + HG+  LG      I    +  DS     C+ D++ Y+ +I G  K G 
Sbjct: 401 M---------WTHGSAALGNLGNSYIG---LVDDSDSRKKCMPDLISYSTIISGLCKAGR 448

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +GEA + + +++ K + P    ++  I+ FCK GK++ A R+L  ++  G   +  TY +
Sbjct: 449 VGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNS 508

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +     +  I  +  L+ EM  + + P    Y  V+  LC+  ++++A  +L++M   G
Sbjct: 509 LIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKG 568

Query: 479 VTPDQITYNTIIRSFCKCKDLR----------------------------------KAFQ 504
           ++P+  +++ +I++FCK  D                                    KA +
Sbjct: 569 ISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKE 628

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           L       + +  +  Y  LID LC +  L +A  +L  L +        ++  +I    
Sbjct: 629 LFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLG 688

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRD 590
             G+ H+A     +M+E   E  +++
Sbjct: 689 KRGNKHEADELAEKMMEMASEGKVKN 714



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 142/324 (43%), Gaps = 19/324 (5%)

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           + LYN+++    K G +     L + ++   +SP   TFN LI   C +G + DAR L D
Sbjct: 21  IYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFD 80

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G EP+  ++   +  YC  G   + L LL EM      P  V Y  +I   CK+ 
Sbjct: 81  KMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEG 140

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL----EPTS 518
           K  +A +L+++M   G++PD +T+N  I + C    + +A ++   M +  +    +P  
Sbjct: 141 KTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNI 200

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TYN+++ G C  G L+ A  L   ++     + + +Y   +      G + +A     +
Sbjct: 201 ITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKE 260

Query: 579 MVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           MV+ G E ++  Y                +    +M S+G  PD      +L  +   G 
Sbjct: 261 MVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGK 320

Query: 624 LGSVFELAAVMIKSGLLPDKFLIN 647
           +     +   M++ G  P+ +  N
Sbjct: 321 VSEANNVLREMMRDGCSPNNYTCN 344



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 20/167 (11%)

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P    YN ++RS  K   +     L   M    + P + T+N+LI  LC +G L +A  L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
              + E      + ++  +++ +C  G   K +    +M   GF                
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFS--------------- 123

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                P++ +   ++ +F + G      +L   M K GL PD    N
Sbjct: 124 -----PNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFN 165


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 251/490 (51%), Gaps = 1/490 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV+T S +I  L ++++ +++   L+E       P V + N +M  + +    E A+ ++
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M++ G  PD  SY+ILIHGL   G ++E+L+  ++M   G  P    YS L +     
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  +  +++  G  PD + +  LI G CQ G V++  +  + M   G + NV  Y
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VLL  +C SG++++A  L  EM++    PD+VTY+ L+  +CK  +V +  +L+  M +
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               PN      ++ GLC    + +A   F S++ + C  +   Y  +I G  +   + +
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK-LHGLEPSAVTYTTFM 420
           A +L+ ++ +  I P  V +NSLI G+CK G + +A +L   +    GL+P+ VT+ T +
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 368

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + +C+ G + R   L+ EM TK +     TY ++I GL +  KL EA+++ + M      
Sbjct: 369 DGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFL 428

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            D ++  + +   CK  ++ +A+ +          P   T+ IL + L   G +++A  L
Sbjct: 429 LDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 488

Query: 541 LVSLQEHNIS 550
           +   +  +I+
Sbjct: 489 MEPAKARDIT 498



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 223/446 (50%), Gaps = 1/446 (0%)

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           + F+Y+ +I  L      EE+ +   +M   G  PD   ++ + +GF   + +  A +V 
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           Q ++  G  PD V+Y +LI G  +IG ++E LK+   M+ +G   ++ AYS L+ ++ K+
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            R+D A  L  EM   G  PD + +  LI GLC+  KV  A + + +M      PN   +
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             +L GLC    + +A   F  +   +C  DVV YN ++D   K   + E  +L+  +  
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
               P+++TF++LI+G C+ G++  A  +  ++   G +P+  TYTT ++  C    + +
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV-IGVTPDQITYNTII 490
              L ++M    I P  V Y  +I G CK+  + EA +L  +M    G+ P  +T+NT+I
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 368

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             FCK   L +A +L+ +M    L   S TY ILI GL     L  A  +   ++E    
Sbjct: 369 DGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFL 428

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFF 576
           L  V+  + +   C  G++ +A   F
Sbjct: 429 LDPVSCVSFVGGLCKTGNIDQAYAVF 454



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 221/427 (51%), Gaps = 1/427 (0%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M    +  +  TYS + K     ++   ++KV+++++  G +PD+  +  ++ G+ +  N
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           +E+  ++ + M+  G+K + ++Y +L+  + K G++DE+L +L EM   G  P +  YS 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           L+R L K  +V  A  L++EM      P+      ++LGLC+   + +A   F  +    
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           C  +V +YN+++ G    G + +A  L+ ++     SP +VT+N+L+   CK  +V +  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           +L + ++  G  P+ +T++T ++  C  G +++ L +   M      P   TYT +I GL
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM-WLHNLEPT 517
           C+  K+ +A +L E M    + PD + YN++I  +CK   + +A +L  +M     L+PT
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 360

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             T+N LIDG C  G L  A+ L+  +    ++     Y  +I        + +A+  + 
Sbjct: 361 IVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYK 420

Query: 578 QMVEKGF 584
           QM EK F
Sbjct: 421 QMREKKF 427



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 226/449 (50%), Gaps = 5/449 (1%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           K    +V + ++I+    K    E +  +   M+  G +PD F++N ++ G   + +ME+
Sbjct: 4   KNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEK 63

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A E    M   G +PD ++Y IL  G   + ++  + K++ +++++G  P +  Y+ L+ 
Sbjct: 64  AREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVR 123

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
              +   V+    L + M+  G   + + +  L+  +C++G++ +A     +M   G +P
Sbjct: 124 ALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQP 183

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           ++  Y++L+ GLC   ++ +A  L+ EM S   SP+   +  +L  +C+   + E    F
Sbjct: 184 NVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLF 243

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           +++  +  + +V+ ++ +I G  + G + +A++++  ++E    P+  T+ +LI G C+ 
Sbjct: 244 EAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRA 303

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA-IGPTHVT 450
            KV  AR L + +    + P AV Y + +  YC+ G++     L +EM   A + PT VT
Sbjct: 304 EKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVT 363

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           +  +I G CK  KL  A +L+ +M   G+  D  TY  +I    +   L +A ++  QM 
Sbjct: 364 FNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMR 423

Query: 511 LHN--LEPTSATYNILIDGLCVNGDLKNA 537
                L+P S      + GLC  G++  A
Sbjct: 424 EKKFLLDPVSCVS--FVGGLCKTGNIDQA 450



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 183/414 (44%), Gaps = 19/414 (4%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M  +    NV  YS ++ S+ K  + +E+  +L EM A G  PD+  ++ +++G  + + 
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + KA ++Y  M      P++ ++  ++ GL +   + E+      ++M      +  Y+ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           ++    K   +  A  L+ ++I     P  + F  LI G C+ GKV DA      +  HG
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
            +P+   Y   ++  C  G +++   L  EM++ +  P  VTY  ++  +CK  +++E  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +L E M   G  P+ IT++T+I   C+  +L KA ++   M     +P   TY  LI GL
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C    +  A  L   + +  I    VAY ++I  +C  G + +A   + +M         
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGA----- 355

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                         G  P       ++  F + G LG   EL A M   GL  D
Sbjct: 356 --------------GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAAD 395



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 142/307 (46%), Gaps = 20/307 (6%)

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
           N   +V  Y+ +I   VK     E+ ++  +++    +P +  FN ++ GF ++  +  A
Sbjct: 5   NIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKA 64

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
           R +   +   G +P  V+Y   ++   + G +   L +L EM  +   P+   Y+ +++ 
Sbjct: 65  REVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRA 124

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           L K  ++  A  L ++M   G  PD++ +  +I   C+   ++ A +   QM  H  +P 
Sbjct: 125 LAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPN 184

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
              YN+L+ GLC +G L+ A+ L   ++ H+ S   V Y T++ A C             
Sbjct: 185 VPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCK-----------A 233

Query: 578 QMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
           + VE+G ++         F  M + G+ P+      ++    + G+L    E+   M+++
Sbjct: 234 RRVEEGCKL---------FEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 284

Query: 638 GLLPDKF 644
           G  P+K+
Sbjct: 285 GCKPNKY 291



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 147/304 (48%), Gaps = 4/304 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           + G V DA     +M +   + ++  YN LL+ L  +  +     L+ ++K      +V 
Sbjct: 162 QAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVV 221

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + ++D +C+  R+++     +      + P+V++ + ++   C+ G  E A  +F  M
Sbjct: 222 TYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSM 281

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L+ G  P+ ++Y  LI GLC A  + +A E    M +  + PDA+ Y+ L  G+     +
Sbjct: 282 LEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSM 341

Query: 185 SGAWKVIQKLL-IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
             A K+ +++    G  P IVT+  LI G+C++G +    +L   M ++G   +   Y +
Sbjct: 342 DEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRI 401

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++ + ++ ++DEAL +  +M       D V+    + GLCK   + +A  ++       
Sbjct: 402 LIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSG 461

Query: 304 ISPN 307
             PN
Sbjct: 462 AVPN 465


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 162/593 (27%), Positives = 267/593 (45%), Gaps = 42/593 (7%)

Query: 33  TYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN   +LL   ++    + +++++  +    N ++ +I+I    +  R  DA+   +  
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LHPDAFSYNILIHGLCIAGS 148
             K   P + +   ++   CK G  E A  +F  M+  G + PD   +  ++  L  A  
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           ++EA E    M + G  PDAI Y+ +  G         A KV+  +L K   P  VTY +
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGI 300

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           L+   C+ G +E   +L  VM + GF+ N + Y+ L+    KSGR+ EA  L  EM   G
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
            +PD++T++++I GLCK     +A + + EM      PN   +  I+ GL +   +  A 
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL---- 384
                +I   C  D V Y  ++DG+ KLG + EA QL  +L +   SP++  ++SL    
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGL 480

Query: 385 --------------------------------IYGFCKNGKVADARRLLDTIKLHGLEPS 412
                                           I G CK G++ +A R+   +   G +P 
Sbjct: 481 CDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPD 540

Query: 413 AVTYTTFMNAYC--EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           A TY   +N  C   E  ++R  ALL ++E     P  VTYT +  GLCK  ++  AV++
Sbjct: 541 ATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKM 600

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           LE+    G   D + Y  +    C    + +A  L  +M      P +A Y  +I+GL  
Sbjct: 601 LEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIK 660

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
              L++A      +       T   YT +++A C  G+V +A   F  M+ +G
Sbjct: 661 GKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARG 713



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 170/649 (26%), Positives = 301/649 (46%), Gaps = 25/649 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDI-KVSETPR 61
           ++RT    DAV     MK    K  + T+  L+  L    +    ++++ ++  +   P 
Sbjct: 164 FARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPP 223

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +   ++ ++  L +  R+++A     +     F P  ++ N ++    K G A+ A  + 
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML     P   +Y IL++ LC AG++E A E    M   G  P+++ Y+ L  GF   
Sbjct: 284 DNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS 343

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  +  +++  G  PD++T+TV+I G C+ GN E+  K  E M+  G K NV+ Y
Sbjct: 344 GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTY 403

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++  + K GR+  A  ++  M A G  PD VTY  L+ G CK  ++ +A QL +E+  
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDK 463

Query: 302 KRISPNSFAHGAILLGLCEKEMI--TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
              SPN   + +++ GLC+   +  T   ++  S   +  +   +  +I++ G  K G +
Sbjct: 464 CSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIV-GLCKTGRL 522

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN--GKVADARRLLDTIKLHGLEPSAVTYT 417
            EA +++++++ +   P   T+N LI G C++   +V  A  LL  +++ G  P AVTYT
Sbjct: 523 DEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYT 582

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
                 C+ G + R + +L+E  ++      V YT +  GLC Q ++  AV L ++M   
Sbjct: 583 PLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQ 642

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G  PD   Y  II    K K L  A +  ++M     +PT ATY  L+  LC  G++  A
Sbjct: 643 GGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEA 702

Query: 538 DCLLVS-LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-----------FE 585
                  L    +  + + Y  +I   C    V  A+  F  M+ +G           F+
Sbjct: 703 FHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFD 762

Query: 586 ISIR----DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
             +R    +  +     M + G PP       +L    +  + G + +L
Sbjct: 763 GLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKL 811



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 157/604 (25%), Positives = 279/604 (46%), Gaps = 19/604 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+T + +++ L  +          +E       P+  S N ++  + +   A+ A   F
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG-VEPDAITYSILAKGFHL 180
            +M +    PD  ++ IL+  LC AG  E+A E  ++M   G V PD   ++ + +    
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             ++  A +V  ++   G  PD + Y  +I G  + G+ +E LK+ + ML++      + 
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT 297

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y +L++S+CK+G ++ A  L   M A G +P+ V Y+ LI G  K  ++ +A  L++EM 
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
                P+   H  ++ GLC+     +A   F+ ++   C  +VV Y  +I G  K+G + 
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A ++ + +I     P  VT+  L+ GFCK G++ +A +LLD +      P+   Y++ +
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477

Query: 421 NAYCEEGNIQRLL-ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
              C+ G+++  L  L ++ +  A          +I GLCK  +L EA ++ + M   G 
Sbjct: 478 KGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGC 537

Query: 480 TPDQITYNTIIRSFCKCKDLR--KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
            PD  TYN +I   C+ ++ R  +AF LL+ + +    P + TY  L  GLC  G++  A
Sbjct: 538 KPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRA 597

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY------ 591
             +L        +   VAYT +    C +G V +A++ F +MV +G       Y      
Sbjct: 598 VKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIING 657

Query: 592 ---------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                       FF  M+  G  P       ++ A    G++   F     M+  G L  
Sbjct: 658 LIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVG 717

Query: 643 KFLI 646
             +I
Sbjct: 718 SVMI 721



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 226/482 (46%), Gaps = 42/482 (8%)

Query: 34  YNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA 90
           Y SL++    +  M +   L+D++  +    +V T++++IDGLC+    + A    +E  
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM 392

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
                P+VV+   I+    K+G    A  +   M+ +G  PD+ +Y  L+ G C  G ++
Sbjct: 393 RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLD 452

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGF-----------HLLSQ---------------- 183
           EA +  +++ +    P+   YS L KG             L  Q                
Sbjct: 453 EAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSI 512

Query: 184 ---------ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI--GNVEEGLKLREVMLSQ 232
                    +  A ++ Q+++ +G  PD  TY +LI G C+     VE    L   +   
Sbjct: 513 IVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMV 572

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G+  + + Y+ L   +CK G +D A+ +L E  + G   D+V Y+ L  GLC Q +V +A
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA 632

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           + L+ EM  +  +P++ A+  I+ GL + + + +A  +FD +I       V  Y  ++  
Sbjct: 633 VSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692

Query: 353 YVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
               GN+ EA   +  ++ +  +  S++ +++LI+GFCK  KV  A +L + +   G  P
Sbjct: 693 LCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVP 752

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           +AVT  +  +     G  ++   LLQEM      P   T+T ++ GL K  +  + ++L+
Sbjct: 753 TAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLV 812

Query: 472 ED 473
           ++
Sbjct: 813 QE 814



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 217/475 (45%), Gaps = 42/475 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           ++++G + +A  +  +M E   +  + T+  ++  L  +   +     ++++       N
Sbjct: 340 FAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPN 399

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +I GL +  R+ +A   ++        P  V+   ++  +CKLG  + A  L  
Sbjct: 400 VVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLD 459

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSME-------------------------------- 150
            + K    P+   Y+ L+ GLC  GS+E                                
Sbjct: 460 ELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKT 519

Query: 151 ----EALEFTNDMGRHGVEPDAITYSILAKGF--HLLSQISGAWKVIQKLLIKGSDPDIV 204
               EA      M   G +PDA TY+IL  G      +++  A+ ++  L + G  PD V
Sbjct: 520 GRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAV 579

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TYT L  G C+IG V+  +K+ E   S+G+  +V+AY+ L + +C  G++D A+ L  EM
Sbjct: 580 TYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEM 639

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              G  PD   Y  +I GL K  K+  A + ++EM  K   P    + A++  LC    +
Sbjct: 640 VRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNV 699

Query: 325 TEARMYFDSLIM-SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
            EA   F+ ++     +  V++Y+ +I G+ K   +  A++L+  +I +   P+ VT  S
Sbjct: 700 DEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSAS 759

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           L  G  ++GK   A+ LL  +   G  P A T+T  ++   +     +LL L+QE
Sbjct: 760 LFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 145/320 (45%), Gaps = 1/320 (0%)

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           E  G + D+ TY+ L+  L  +    +   ++ EM    I+PN+F+   ++         
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR-ISPSIVTFNS 383
            +A   F+ +    C  D+  + I++D   K G   +A +++ +++    + P      +
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           ++    K  +V +AR +   ++  G  P A+ Y T ++   + G+ Q  L +L  M  KA
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             PT VTY +++  LCK   L+ A +L   M   G  P+ + Y ++I  F K   +++A 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L ++M      P   T+ ++IDGLC +G+ + A      +         V YTTII+  
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410

Query: 564 CAEGDVHKAMTFFCQMVEKG 583
              G V  A      M+  G
Sbjct: 411 SKIGRVANAFRIMKGMIAHG 430


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 183/748 (24%), Positives = 317/748 (42%), Gaps = 106/748 (14%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +L   Y + G V DA   I  M E   K S+ + N++L  L     ++ +W    +    
Sbjct: 165 LLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDR 224

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY--------- 108
           + P +V T +IV++ LC Q +L  A   LQ+       P+ V+ N I++ Y         
Sbjct: 225 KFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSA 283

Query: 109 --------------------------CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
                                     CKL  +  A  L   M +  L PD  SYN LIHG
Sbjct: 284 LRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHG 343

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
               G +  A+   N M R  ++P   TY+ L  G+    +   A +V+ ++ I G  P 
Sbjct: 344 FFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPS 403

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
            +TY+ L+ GYC+   +   L L + + S+   +N   Y++L+   C+ G + +A  +L 
Sbjct: 404 ELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILK 463

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
            M A G+ PD++TYS LI G+CK   +H+  ++ + M    + PN+  +  ++   C+  
Sbjct: 464 CMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAG 523

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
              EA  YF  +  S  + + V++N ++  + + G I EA Q  + +   +IS  + +FN
Sbjct: 524 HAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFN 583

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
            +I  +C+ G V +A  + D +  HG  P   TY + +   C+ G++ +    +  +  K
Sbjct: 584 CIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEK 643

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
           A      T   ++ G+CK   L EA+ L E M    + PD  TY  ++  FCK   +  A
Sbjct: 644 ACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPA 703

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN---------------ADC-------- 539
             LL  M    L P +  Y  L++GL   G +K                ADC        
Sbjct: 704 LILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMN 763

Query: 540 -------------LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF-- 584
                        L+ ++ E+ +  +  +Y  ++  +  +G + + +  +  MV++G   
Sbjct: 764 GYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKP 823

Query: 585 -------------EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQG---------- 621
                        E  + +    F   M+  G  PD    ++++ AF +           
Sbjct: 824 DNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLF 883

Query: 622 ------GDLGSVFELAAVMIKSGLLPDK 643
                 GD+   FEL   M   G++P +
Sbjct: 884 SYMKWVGDIDGAFELKEDMKALGVVPSE 911



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 167/641 (26%), Positives = 298/641 (46%), Gaps = 55/641 (8%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRN 62
            Y R G   +A  V+ +M+   ++ S  TY++LL    +H+ +    DL   ++      N
Sbjct: 379  YCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISIN 438

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
                +I+IDG CQ   +  A   L+        P V++ +A+++  CK+G     K +  
Sbjct: 439  RTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILS 498

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             M K G+ P+   Y  L+   C AG  +EAL++  D+ R G+  +++ ++ L   F+   
Sbjct: 499  RMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREG 558

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY- 241
             I+ A +  Q +       D+ ++  +I  YCQ GNV E   + + M+  G+  ++  Y 
Sbjct: 559  MIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYG 618

Query: 242  ----------------------------------SVLLSSMCKSGRIDEALGLLYEMEAV 267
                                              + LL  +CK G +DEAL L  +M   
Sbjct: 619  SLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTR 678

Query: 268  GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
             + PD  TY+IL+ G CK+ KV  A+ L   M  K + P++ A+  +L GL  +  +  A
Sbjct: 679  NILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAA 738

Query: 328  RMYFDSLIMSNCI-QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
               F  +I    +  D + YN M++GY+K G I E  +L R + E  + PS  ++N L++
Sbjct: 739  SYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMH 798

Query: 387  GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
            G+ K G+++    L   +   G++P  VTY   +   CE G I+  +  L++M  + + P
Sbjct: 799  GYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFP 858

Query: 447  THVTYTVVIKGLCKQWKLQEAVQLL----------------EDMYVIGVTPDQITYNTII 490
             ++ + ++IK   ++ K+  A+QL                 EDM  +GV P ++  ++I+
Sbjct: 859  DNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIV 918

Query: 491  RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
            R  CKC  + +A  + + +    + PT AT+  L+ GLC    + +A  L   ++   + 
Sbjct: 919  RGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLK 978

Query: 551  LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
            +  V Y  +I   C +  +  A+  + +M  KG   +I  Y
Sbjct: 979  VDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTY 1019



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 231/473 (48%), Gaps = 17/473 (3%)

Query: 62   NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            +V + + +ID  CQ+  + +A           + P + +  +++   C+ G    AK   
Sbjct: 578  DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 637

Query: 122  CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              +L+     D  + N L+ G+C  G+++EAL+    M    + PD  TY+IL  GF   
Sbjct: 638  VYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKR 697

Query: 182  SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG-LKLREVMLSQGFKLNVIA 240
             ++  A  ++Q +L KG  PD + YT L+ G    G V+      +E++  +G   + IA
Sbjct: 698  GKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIA 757

Query: 241  YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
            Y+ +++   K G+I+E   L+  M    + P   +Y+IL+ G  K+ ++ + + LY +M 
Sbjct: 758  YNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMV 817

Query: 301  SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
             + I P++  +  ++ GLCE  +I  A  + + +++     D + ++I+I  + +   + 
Sbjct: 818  KEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMS 877

Query: 361  EAVQLYR------------QLIEKR----ISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
             A+QL+             +L E      + PS V  +S++ G CK GKV +A  +  +I
Sbjct: 878  NALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSI 937

Query: 405  KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
               G+ P+  T+TT M+  C+E  I     L Q ME+  +    VTY V+I GLC +  +
Sbjct: 938  MRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCI 997

Query: 465  QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
             +A+ L E+M   G+ P+  TY T+  +      ++   +LL  +    + P+
Sbjct: 998  CDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 1050



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 217/433 (50%), Gaps = 16/433 (3%)

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           L + F L+V   +++L+S+C  G++ +A  +L +M+   L P+ VTY+ ++    K+ + 
Sbjct: 222 LDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRC 280

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             A+++ ++M    I  + + +  ++  LC+ +    A +    +   N   D   YN +
Sbjct: 281 KSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTL 340

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           I G+   G I  A+ ++ Q++ + + PS+ T+ +LI G+C+NG+  +ARR+L  +++ G+
Sbjct: 341 IHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGV 400

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            PS +TY+  +N YC+   +   L L++ + +++I      YT++I G C+  ++ +A Q
Sbjct: 401 RPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQ 460

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +L+ M   G+ PD ITY+ +I   CK   + +  ++L++M    + P +  Y  L+   C
Sbjct: 461 ILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFC 520

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF--FCQMVEKGFEIS 587
             G  K A    V +    +    V +  ++ +   EG + +A  F  +   ++  F+++
Sbjct: 521 KAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVA 580

Query: 588 -----IRDYTK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
                I  Y +        S +  M+ +G+PPD      +L    QGG L    E    +
Sbjct: 581 SFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYL 640

Query: 635 IKSGLLPDKFLIN 647
           ++     D+  +N
Sbjct: 641 LEKACAIDEKTLN 653



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/528 (22%), Positives = 216/528 (40%), Gaps = 121/528 (22%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP------------------------- 271
           N+ +  +L+++  K G++ +A   ++ M+  G K                          
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFL 218

Query: 272 ----------DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
                     D+ T +I++  LC Q K+ KA  +  +M + R+ PN+  +  IL    +K
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKK 277

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL------------------------- 356
                A    D +  +    D+  YNIMID   KL                         
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 357 ----------GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
                     G I  A+ ++ Q++ + + PS+ T+ +LI G+C+NG+  +ARR+L  +++
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI 397

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+ PS +TY+  +N YC+   +   L L++ + +++I      YT++I G C+  ++ +
Sbjct: 398 TGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSK 457

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A Q+L+ M   G+ PD ITY+ +I   CK   + +  ++L++M    + P +  Y  L+ 
Sbjct: 458 AKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVF 517

Query: 527 GLCVNGDLKNA-------------------DCLLVS----------------LQEHNISL 551
             C  G  K A                   + LL S                +    IS 
Sbjct: 518 YFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISF 577

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------------TKSFF 596
              ++  II ++C  G+V +A + +  MV  G+   I  Y                K F 
Sbjct: 578 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 637

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
             +L      D++    +L+   + G L    +L   M+   +LPD +
Sbjct: 638 VYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTY 685



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 222/461 (48%), Gaps = 35/461 (7%)

Query: 16   VFVIAKMKELDLKVSIQTYNSLLYNL-RHT--DIMWDLYDDIKVSETPRNVYTNSIVIDG 72
            V+++ K   +D K    T N+LL  + +H   D   DL + +       + YT +I++DG
Sbjct: 638  VYLLEKACAIDEK----TLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDG 693

Query: 73   LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC-LMLKYGLHP 131
             C++ ++  A++ LQ    K   P  ++   +++     G  + A  +F  ++ K GL+ 
Sbjct: 694  FCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYA 753

Query: 132  DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
            D  +YN +++G    G + E      +M  + V P + +Y+IL  G+    Q+S    + 
Sbjct: 754  DCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLY 813

Query: 192  QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            + ++ +G  PD VTY +LI G C+ G +E  +K  E M+ +G   + +A+ +L+ +  + 
Sbjct: 814  RDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEK 873

Query: 252  GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
             ++  AL L   M+ VG                    +  A +L  +M +  + P+  A 
Sbjct: 874  SKMSNALQLFSYMKWVG-------------------DIDGAFELKEDMKALGVVPSEVAE 914

Query: 312  GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             +I+ GLC+   + EA + F S++ +  +  +  +  ++ G  K   I +A  L +QL+E
Sbjct: 915  SSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHL-KQLME 973

Query: 372  K-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
               +   +VT+N LI G C    + DA  L + +K  GL P+  TY T   A    G +Q
Sbjct: 974  SCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQ 1033

Query: 431  RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
                LL+++E + I P++     +      +W+++ A++ L
Sbjct: 1034 DGEKLLKDIEDRGIVPSYKHPESL------EWRMENAIKRL 1068



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 145/304 (47%), Gaps = 17/304 (5%)

Query: 358 NIGEAVQLY-RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           N  E V L+ ++ ++++    + T N ++   C  GK++ A  +L  +K   L P+AVTY
Sbjct: 209 NKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTY 267

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T +N Y ++G  +  L +L +ME   I     TY ++I  LCK  +   A  LL+ M  
Sbjct: 268 NTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMRE 327

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
           + +TPD+ +YNT+I  F     +  A  + NQM   +L+P+ ATY  LIDG C NG    
Sbjct: 328 VNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDE 387

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---- 592
           A  +L  +Q   +  +++ Y+ ++  +C    +  A+     +  +   I+   YT    
Sbjct: 388 ARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILID 447

Query: 593 -----------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                      K     ML++G  PD      ++    + G +    E+ + M KSG+LP
Sbjct: 448 GFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLP 507

Query: 642 DKFL 645
           +  L
Sbjct: 508 NNVL 511


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 128/379 (33%), Positives = 206/379 (54%)

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G  + A+     M   G  P+  SYN +IHG    G++E A    + M   G+EPD+ TY
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
             L  G     ++  A  +  K++  G  P+ VTY  LI GYC  G++E     R+ M+ 
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +G   +V  Y++L+ ++   GR+ EA  ++ EM   G+ PD +TY+ILI G  +     +
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A  L+NEM SK I P    + +++  L  +  + EA   F+ ++      DV+++N MID
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G+   GN+  A  L +++  K + P  VTFN+L+ G C+ GKV +AR LLD +K  G++P
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
             ++Y T ++ Y   G+I+    +  EM +    PT +TY  +IK LCK  +   A +LL
Sbjct: 487 DHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 546

Query: 472 EDMYVIGVTPDQITYNTII 490
           ++M   G++PD  TY ++I
Sbjct: 547 KEMVNKGISPDDSTYLSLI 565



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 201/365 (55%)

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  P++V+Y  +I GY   GN+E   ++ + M  +G + +   Y  L+S MCK GR++EA
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 262

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
            GL  +M  +GL P+ VTY+ LI G C +  + +A    +EM  K I P+   +  ++  
Sbjct: 263 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 322

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           L  +  + EA      +     I D + YNI+I+GY + GN   A  L+ +++ K I P+
Sbjct: 323 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPT 382

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            VT+ SLIY   +  ++ +A  L + I   G+ P  + +   ++ +C  GN++R   LL+
Sbjct: 383 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLK 442

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM+ K++ P  VT+  +++G C++ K++EA  LL++M   G+ PD I+YNT+I  + +  
Sbjct: 443 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRG 502

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
           D++ AF + ++M      PT  TYN LI  LC N +   A+ LL  +    IS     Y 
Sbjct: 503 DIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYL 562

Query: 558 TIIKA 562
           ++I+ 
Sbjct: 563 SLIEG 567



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 204/391 (52%), Gaps = 20/391 (5%)

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G++ +A   +  ME +G KP++V+Y+ +I G   +  +  A ++ + M  K I P+S+ +
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
           G+++ G+C++  + EA   FD ++    + + V YN +IDGY   G++  A     ++++
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K I PS+ T+N L++     G++ +A  ++  ++  G+ P A+TY   +N Y   GN +R
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              L  EM +K I PTHVTYT +I  L ++ +++EA  L E +   GV+PD I +N +I 
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
             C   ++ +AF LL +M   ++ P   T+N L+ G C  G ++ A  LL  ++   I  
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEIC 611
             ++Y T+I  +   GD+  A     +M+  GF  ++  Y     C+            C
Sbjct: 487 DHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCL------------C 534

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +      +Q GDL    EL   M+  G+ PD
Sbjct: 535 K------NQEGDLAE--ELLKEMVNKGISPD 557



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 188/372 (50%), Gaps = 3/372 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV + + +I G   +  ++ A   L     K   P   +  +++S  CK G  E A GLF
Sbjct: 207 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 266

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M++ GL P+A +YN LI G C  G +E A  + ++M + G+ P   TY++L     + 
Sbjct: 267 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME 326

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  +I+++  KG  PD +TY +LI GY + GN +    L   MLS+G +   + Y
Sbjct: 327 GRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTY 386

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+  + +  R+ EA  L  ++   G+ PD++ ++ +I G C    V +A  L  EM  
Sbjct: 387 TSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDR 446

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K + P+      ++ G C +  + EARM  D +       D + YN +I GY + G+I +
Sbjct: 447 KSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKD 506

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  +  +++    +P+++T+N+LI   CKN +   A  LL  +   G+ P   TY + + 
Sbjct: 507 AFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 566

Query: 422 AYCEEGNIQRLL 433
                GN+  L+
Sbjct: 567 GM---GNVDTLV 575



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 171/377 (45%), Gaps = 33/377 (8%)

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           E  S  ++P   ++  +L  LC K  +      F   +  +C+ D   Y + +    +L 
Sbjct: 87  EQVSPNLTPALISN--VLYNLCSKPQLVSD---FIHHLHPHCL-DTKSYCLAVVLLARLP 140

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK------------NGKVADARRLLDTIK 405
           +   A+QL +Q++E RI+ +   F+ L     +             GK+  AR  +  ++
Sbjct: 141 SPKLALQLLKQVMETRIATNRELFDELTLSRDRLSVKSSIVFDLLEGKLKKAREFIGFME 200

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             G +P+ V+Y T ++ Y   GNI+    +L  M  K I P   TY  +I G+CK+ +L+
Sbjct: 201 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 260

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA  L + M  IG+ P+ +TYNT+I  +C   DL +AF   ++M    + P+ +TYN+L+
Sbjct: 261 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 320

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
             L + G +  AD ++  +++  I    + Y  +I  +   G+  +A     +M+ KG E
Sbjct: 321 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIE 380

Query: 586 ISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
            +   YT                  F  +L  G  PD  +   M+      G++   F L
Sbjct: 381 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFML 440

Query: 631 AAVMIKSGLLPDKFLIN 647
              M +  + PD+   N
Sbjct: 441 LKEMDRKSVPPDEVTFN 457



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 168/360 (46%), Gaps = 40/360 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDD-IKVSETPR 61
           YS  G +  A  ++  M+   ++    TY SL+  +     + +   L+D  +++   P 
Sbjct: 218 YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP- 276

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T + +IDG C +  L+ A  +  E   K   PSV + N ++      G    A  + 
Sbjct: 277 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI 336

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M K G+ PDA +YNILI+G    G+ + A +  N+M   G+EP  +TY+ L       
Sbjct: 337 KEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRR 396

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           +++  A  + +K+L +G  PD++ +  +I G+C  GNVE    L + M  +    + + +
Sbjct: 397 NRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 456

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPD----------------------------- 272
           + L+   C+ G+++EA  LL EM+  G+KPD                             
Sbjct: 457 NTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLS 516

Query: 273 ------LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
                 L+TY+ LI+ LCK  +   A +L  EM +K ISP+   + +++ G+   + + E
Sbjct: 517 IGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 156/597 (26%), Positives = 285/597 (47%), Gaps = 25/597 (4%)

Query: 73  LCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG--L 129
           LC   R  +A+ + L   +     P  +S N ++   C    ++ A  +   M K G   
Sbjct: 169 LCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRC 228

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            PD  S+N +IHG    G + +A    N+M + GV PD  TY+ +         +  A  
Sbjct: 229 SPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEF 288

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           V+++++ KG +PD VTY  +I GY   G+ +E  K+   M S+G   + + +S  +SS+C
Sbjct: 289 VLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLC 348

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K GR  +A  +   M   G  PD+V+YSIL+ G   + +      L++ M  K I  N  
Sbjct: 349 KHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCH 408

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
               ++    ++ M+ EA + F  +       +VV Y+ +I  + ++G + +A++ + Q+
Sbjct: 409 CINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQM 468

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL-EPSAVTYTTFMNAYCEEGN 428
           I   I P+   ++SLI+GFC +G +  A+  +  +   GL  P+ V +++ +++ C EG 
Sbjct: 469 ISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGR 528

Query: 429 I---QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +   Q +  L+  +  +   PT VT+  +I G C   K+++A  +L+ M  +G+ PD +T
Sbjct: 529 VMDAQDVFNLVIHIGDR---PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVT 585

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
            NT++  +CK   +     L  +M    ++PT+ TYNI++DGL   G    A  +   + 
Sbjct: 586 NNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMI 645

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFF-------CQ--------MVEKGFEISIRD 590
           +   ++    Y  ++K  C      +A+T F       C+        M+   +++  R+
Sbjct: 646 DSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRRE 705

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                F  + ++G  P+     VM+    + G +     + + M KSG  P   L+N
Sbjct: 706 EANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLN 762



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 159/579 (27%), Positives = 281/579 (48%), Gaps = 8/579 (1%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIK--VSETPR---NVYTNSIVIDG 72
           ++ +M EL       +YN+++ +L       +  D ++    E  R   +V + + VI G
Sbjct: 182 LLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 241

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
             +Q  +  A     E   K   P V + N+I+   CK    + A+ +   M+  G+ PD
Sbjct: 242 FFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPD 301

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
             +YN +IHG   +G  +E+ +    M   G+ PD +T+S          +   A ++ Q
Sbjct: 302 GVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQ 361

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
            +  KG  PDIV+Y++L+ GY   G   +   L   M  +G   N    ++L+S+  K G
Sbjct: 362 YMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRG 421

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            +DEA+ +  EM+  G++P++VTYS LI   C+  ++  A++ +++M S  I PN+  + 
Sbjct: 422 MMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYH 481

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQ--DVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +++ G C    + +A+  F S +MS  +   ++V ++ +I      G + +A  ++  +I
Sbjct: 482 SLIHGFCMHGDLVKAK-EFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVI 540

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
                P+IVTFNSLI G+C  GK+  A  +LD +   G+EP  VT  T ++ YC+ G I 
Sbjct: 541 HIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKID 600

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             L L +EM  K + PT VTY +V+ GL +  +   A ++  +M   G   D  TY  ++
Sbjct: 601 DGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILL 660

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
           +  C+     +A  L +++   + +      N +I+ L      + A+ L  ++    + 
Sbjct: 661 KGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLV 720

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
                Y  +I+    EG V +A T F  M + G   S R
Sbjct: 721 PNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSR 759



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 170/654 (25%), Positives = 290/654 (44%), Gaps = 123/654 (18%)

Query: 19  IAKMKELDLK---VSIQTYNSLLYNLRHTDIMWD--LYDDIKVSETPRNVYTNSIVIDGL 73
           +A++    LK   +   T+   L + + TD   D  L+   ++S  P  +  N+ VI  L
Sbjct: 147 VARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNT-VIKSL 205

Query: 74  CQQSRLQDAILFLQETA--GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           C  SR Q+A+  +Q  A  G    P VVS N ++  + K G    A  LF  M++ G+ P
Sbjct: 206 CGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVP 265

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  +YN ++  LC A +M++A      M   GVEPD +TY+ +  G+        + K+ 
Sbjct: 266 DVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMF 325

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL------ 245
           +K+  KG  PD VT++  +   C+ G  ++  ++ + M ++G   ++++YS+LL      
Sbjct: 326 RKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATE 385

Query: 246 -----------------------------SSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
                                        S+  K G +DEA+ +  EM+  G++P++VTY
Sbjct: 386 GRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTY 445

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           S LI   C+  ++  A++ +++M S  I PN+  + +++ G C    + +A+  F S +M
Sbjct: 446 STLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAK-EFISEMM 504

Query: 337 SNCIQ--DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           S  +   ++V ++ +I      G + +A  ++  +I     P+IVTFNSLI G+C  GK+
Sbjct: 505 SKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKM 564

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT---- 450
             A  +LD +   G+EP  VT  T ++ YC+ G I   L L +EM  K + PT VT    
Sbjct: 565 EKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIV 624

Query: 451 -------------------------------YTVVIKGLCKQWKLQEAVQLLE------- 472
                                          Y +++KGLC+     EA+ L         
Sbjct: 625 LDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDC 684

Query: 473 ------------------------DMYVI----GVTPDQITYNTIIRSFCKCKDLRKAFQ 504
                                   D++      G+ P+  TY  +IR+  K   + +A  
Sbjct: 685 KFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADT 744

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA-------DCLLVSLQEHNISL 551
           + + M      P+S   N +I  L   GD+  A       D  ++SL+    SL
Sbjct: 745 MFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSL 798



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 198/405 (48%), Gaps = 10/405 (2%)

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL----NVIAYSVLLS 246
           + +LL  G     +  T  +   C     +E +   +V+L +  +L    + I+Y+ ++ 
Sbjct: 147 VARLLRAGLKTGTIQATTFLKCLCHAKRTDEAV---DVLLHRMSELSCVPDAISYNTVIK 203

Query: 247 SMCKSGRIDEALGLLYEMEAVGLK--PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           S+C   R  EAL ++  M   G +  PD+V+++ +I G  KQ +V KA  L+NEM  K +
Sbjct: 204 SLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGV 263

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+   + +I+  LC+   + +A      ++      D V YN +I GY   G+  E+ +
Sbjct: 264 VPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAK 323

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           ++R++  K + P  VTF+S +   CK+G+  DA  +   +   G  P  V+Y+  ++ Y 
Sbjct: 324 MFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYA 383

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
            EG    +  L   M  K I        ++I    K+  + EA+ +  +M   GV P+ +
Sbjct: 384 TEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVV 443

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TY+T+I +FC+   L  A +  +QM    +EP +A Y+ LI G C++GDL  A   +  +
Sbjct: 444 TYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEM 503

Query: 545 QEHNISLTKVA-YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
               +    +  +++II + C EG V  A   F  ++  G   +I
Sbjct: 504 MSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTI 548



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 223/450 (49%), Gaps = 6/450 (1%)

Query: 31  IQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           I +Y+ LL+      R  D M +L+  +       N +  +I+I    ++  + +A+L  
Sbjct: 372 IVSYSILLHGYATEGRFAD-MNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVF 430

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            E  G+   P+VV+ + ++S +C++G    A   F  M+  G+ P+   Y+ LIHG C+ 
Sbjct: 431 TEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMH 490

Query: 147 GSMEEALEFTNDMGRHGV-EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
           G + +A EF ++M   G+  P+ + +S +     +  ++  A  V   ++  G  P IVT
Sbjct: 491 GDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVT 550

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           +  LI GYC +G +E+   + + M+S G + +V+  + L+S  CKSG+ID+ L L  EM 
Sbjct: 551 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREML 610

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
              +KP  VTY+I++ GL +  +   A ++++EM     + +   +  +L GLC  ++  
Sbjct: 611 HKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTD 670

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA   F  L   +C  D+ + N MI+   K+    EA  L+  +    + P++ T+  +I
Sbjct: 671 EAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMI 730

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
               K G V +A  +  +++  G  PS+      +    ++G+I +    + +++   I 
Sbjct: 731 RNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIIS 790

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
               T ++++     + K +E ++ L   Y
Sbjct: 791 LEASTTSLLMSLFSSKGKHREQIKFLPAKY 820



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/537 (24%), Positives = 239/537 (44%), Gaps = 41/537 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM----WDLYDDIKVSETPR 61
           + + G V  A  +  +M +  +   + TYNS++  L     M    + L   +     P 
Sbjct: 242 FFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPD 301

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V  N+I+    C     + A +F + T+ K   P  V+ ++ MS  CK G ++ A+ +F
Sbjct: 302 GVTYNAIIHGYSCSGHWKESAKMFRKMTS-KGLIPDTVTFSSFMSSLCKHGRSKDAEEIF 360

Query: 122 CLMLKYGLHPDAFSYNILIHGL--------------------------CI---------A 146
             M   G  PD  SY+IL+HG                           CI          
Sbjct: 361 QYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKR 420

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G M+EA+    +M   GV P+ +TYS L   F  + +++ A +   +++  G +P+   Y
Sbjct: 421 GMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVY 480

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGF-KLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
             LI G+C  G++ +  +    M+S+G  + N++ +S ++ S+C  GR+ +A  +   + 
Sbjct: 481 HSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVI 540

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
            +G +P +VT++ LI G C   K+ KA  + + M S  I P+   +  ++ G C+   I 
Sbjct: 541 HIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKID 600

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +  + F  ++        V YNI++DG ++ G    A +++ ++I+   +  I T+  L+
Sbjct: 601 DGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILL 660

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G C+N    +A  L   +     +       T +NA  +    +    L   + T  + 
Sbjct: 661 KGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLV 720

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
           P   TY V+I+ L K+  ++EA  +   M   G  P     N IIR   +  D+ KA
Sbjct: 721 PNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 777



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 187/398 (46%), Gaps = 6/398 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   +++ GM+ +A+ V  +M+   ++ ++ TY++L+       R  D M      I +
Sbjct: 412 ILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISI 471

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEF-GPSVVSLNAIMSRYCKLGFAE 115
              P     +S+ I G C    L  A  F+ E   K    P++V  ++I+   C  G   
Sbjct: 472 GIEPNTAVYHSL-IHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVM 530

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            A+ +F L++  G  P   ++N LI G C+ G ME+A    + M   G+EPD +T + L 
Sbjct: 531 DAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLV 590

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            G+    +I     + +++L K   P  VTY +++ G  + G      K+   M+  G  
Sbjct: 591 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTA 650

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           +++  Y +LL  +C++   DEA+ L +++ A+  K D+   + +I  L K  +  +A  L
Sbjct: 651 VDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDL 710

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +  + +  + PN   +G ++  L ++  + EA   F S+  S C     L N +I   ++
Sbjct: 711 FAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQ 770

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
            G+I +A     ++    IS    T + L+  F   GK
Sbjct: 771 KGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 808


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 162/593 (27%), Positives = 267/593 (45%), Gaps = 42/593 (7%)

Query: 33  TYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN   +LL   ++    + +++++  +    N ++ +I+I    +  R  DA+   +  
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LHPDAFSYNILIHGLCIAGS 148
             K   P + +   ++   CK G  E A  +F  M+  G + PD   +  ++  L  A  
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           ++EA E    M + G  PDAI Y+ +  G         A KV+  +L K   P  VTY +
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGI 300

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           L+   C+ G +E   +L  VM + GF+ N + Y+ L+    KSGR+ EA  L  EM   G
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
            +PD++T++++I GLCK     +A + + EM      PN   +  I+ GL +   +  A 
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL---- 384
                +I   C  D V Y  ++DG+ KLG + EA QL  +L +   SP++  ++SL    
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGL 480

Query: 385 --------------------------------IYGFCKNGKVADARRLLDTIKLHGLEPS 412
                                           I G CK G++ +A R+   +   G +P 
Sbjct: 481 CDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPD 540

Query: 413 AVTYTTFMNAYC--EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           A TY   +N  C   E  ++R  ALL ++E     P  VTYT +  GLCK  ++  AV++
Sbjct: 541 ATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKM 600

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           LE+    G   D + Y  +    C    + +A  L  +M      P +A Y  +I+GL  
Sbjct: 601 LEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIK 660

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
              L++A      +       T   YT +++A C  G+V +A   F  M+ +G
Sbjct: 661 VKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARG 713



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 161/605 (26%), Positives = 282/605 (46%), Gaps = 21/605 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+T + +++ L  +          +E       P+  S N ++  + +   A+ A   F
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG-VEPDAITYSILAKGFHL 180
            +M +    PD  ++ IL+  LC AG  E+A E  ++M   G V PD   ++ + +    
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             ++  A +V  ++   G  PD + Y  +I G  + G+ +E LK+ + ML++      + 
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT 297

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y +L++S+CK+G ++ A  L   M A G +P+ V Y+ LI G  K  ++ +A  L++EM 
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
                P+   H  ++ GLC+     +A   F+ ++   C  +VV Y  +I G  K+G + 
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A ++ + +I     P  VT+  L+ GFCK G++ +A +LLD +      P+   Y++ +
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPT--HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
           N  C+ G++++ L  L E ++KA   T        +I GLCK  +L EA ++ + M   G
Sbjct: 478 NGLCDGGSVEKTLDDLFE-QSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG 536

Query: 479 VTPDQITYNTIIRSFCKCKDLR--KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             PD  TYN +I   C+ ++ R  +AF LL+ +      P + TY  L  GLC  G++  
Sbjct: 537 CKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDR 596

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY----- 591
           A  +L        +   VAYT +    C +G V +A++ F +MV +G       Y     
Sbjct: 597 AVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIIN 656

Query: 592 ----------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                        FF  M+  G  P       ++ A    G++   F     M+  G L 
Sbjct: 657 GLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELV 716

Query: 642 DKFLI 646
              +I
Sbjct: 717 GSVMI 721



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 170/649 (26%), Positives = 301/649 (46%), Gaps = 25/649 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDI-KVSETPR 61
           ++RT    DAV     MK    K  + T+  L+  L    +    ++++ ++  +   P 
Sbjct: 164 FARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPP 223

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +   ++ ++  L +  R+++A     +     F P  ++ N ++    K G A+ A  + 
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML     P   +Y IL++ LC AG++E A E    M   G  P+++ Y+ L  GF   
Sbjct: 284 DNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS 343

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  +  +++  G  PD++T+TV+I G C+ GN E+  K  E M+  G K NV+ Y
Sbjct: 344 GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTY 403

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++  + K GR+  A  ++  M A G  PD VTY  L+ G CK  ++ +A QL +E+  
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDK 463

Query: 302 KRISPNSFAHGAILLGLCEKEMITEA--RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
              SPN   + +++ GLC+   + +    ++  S   +  +   +  +I++ G  K G +
Sbjct: 464 CSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIV-GLCKTGRL 522

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN--GKVADARRLLDTIKLHGLEPSAVTYT 417
            EA +++++++ +   P   T+N LI G C++   +V  A  LL  ++  G  P AVTYT
Sbjct: 523 DEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYT 582

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
                 C+ G + R + +L+E  ++      V YT +  GLC Q ++  AV L ++M   
Sbjct: 583 PLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQ 642

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G  PD   Y  II    K K L  A +  ++M     +PT ATY  L+  LC  G++  A
Sbjct: 643 GGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEA 702

Query: 538 DCLLVS-LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-----------FE 585
                S L    +  + + Y  +I   C    V  A+  F  M+ +G           F+
Sbjct: 703 FHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFD 762

Query: 586 ISIR----DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
             +R    +  +     M + G PP       +L    +  + G + +L
Sbjct: 763 GLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKL 811



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 225/482 (46%), Gaps = 42/482 (8%)

Query: 34  YNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA 90
           Y SL++    +  M +   L+D++  +    +V T++++IDGLC+    + A    +E  
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM 392

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
                P+VV+   I+    K+G    A  +   M+ +G  PD+ +Y  L+ G C  G ++
Sbjct: 393 RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLD 452

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGF-----------HLLSQ---------------- 183
           EA +  +++ +    P+   YS L  G             L  Q                
Sbjct: 453 EAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSI 512

Query: 184 ---------ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI--GNVEEGLKLREVMLSQ 232
                    +  A ++ Q+++ +G  PD  TY +LI G C+     VE    L   +   
Sbjct: 513 IVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKV 572

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G+  + + Y+ L   +CK G +D A+ +L E  + G   D+V Y+ L  GLC Q +V +A
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA 632

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           + L+ EM  +  +P++ A+  I+ GL + + + +A  +FD +I       V  Y  ++  
Sbjct: 633 VSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692

Query: 353 YVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
               GN+ EA   +  ++ +  +  S++ +++LI+GFCK  KV  A +L + +   G  P
Sbjct: 693 LCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVP 752

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           +AVT  +  +     G  ++   LLQEM      P   T+T ++ GL K  +  + ++L+
Sbjct: 753 TAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLV 812

Query: 472 ED 473
           ++
Sbjct: 813 QE 814



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 218/475 (45%), Gaps = 42/475 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           ++++G + +A  +  +M E   +  + T+  ++  L  +   +     ++++       N
Sbjct: 340 FAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPN 399

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +I GL +  R+ +A   ++        P  V+   ++  +CKLG  + A  L  
Sbjct: 400 VVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLD 459

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSME-------------------------------- 150
            + K    P+   Y+ L++GLC  GS+E                                
Sbjct: 460 ELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKT 519

Query: 151 ----EALEFTNDMGRHGVEPDAITYSILAKGF--HLLSQISGAWKVIQKLLIKGSDPDIV 204
               EA      M   G +PDA TY+IL  G      +++  A+ ++  L   G  PD V
Sbjct: 520 GRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAV 579

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TYT L  G C+IG V+  +K+ E   S+G+  +V+AY+ L + +C  G++D A+ L  EM
Sbjct: 580 TYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEM 639

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              G  PD   Y  +I GL K  K+  A + ++EM  K   P    + A++  LC    +
Sbjct: 640 VRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNV 699

Query: 325 TEARMYFDSLIM-SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
            EA   F+S++     +  V++Y+ +I G+ K   +  A++L+  +I +   P+ VT  S
Sbjct: 700 DEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSAS 759

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           L  G  ++GK   A+ LL  +   G  P A T+T  ++   +     +LL L+QE
Sbjct: 760 LFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 145/320 (45%), Gaps = 1/320 (0%)

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           E  G + D+ TY+ L+  L  +    +   ++ EM    I+PN+F+   ++         
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR-ISPSIVTFNS 383
            +A   F+ +    C  D+  + I++D   K G   +A +++ +++    + P      +
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           ++    K  +V +AR +   ++  G  P A+ Y T ++   + G+ Q  L +L  M  KA
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             PT VTY +++  LCK   L+ A +L   M   G  P+ + Y ++I  F K   +++A 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L ++M      P   T+ ++IDGLC +G+ + A      +         V YTTII+  
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410

Query: 564 CAEGDVHKAMTFFCQMVEKG 583
              G V  A      M+  G
Sbjct: 411 SKIGRVANAFRIMKGMIAHG 430


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 155/590 (26%), Positives = 295/590 (50%), Gaps = 12/590 (2%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVS---IQTYNSLLYNLRHTDIMWDLYDDIKVS 57
           M AFV +  G    A+ ++ +M+E+ ++ S   +     LL  +     +W L+ D+ + 
Sbjct: 203 MRAFVNAEMGF--QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDV-IR 259

Query: 58  ETPRNV-YTNSIVIDGLCQQS--RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
             P+   YT S +I G C++    L +++L L      E  P+  + N +++  C  G  
Sbjct: 260 RGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCE--PNAFAYNIVINACCIRGRT 317

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
             A   F LM++ G +P   ++N +I+  C  G++ EA +  + +   G  P+AI Y+ L
Sbjct: 318 SDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTL 377

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G+  + +I  A  + +++  KG  PD +T+ +L+ G+ + G  E+G +L + +   G 
Sbjct: 378 MNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGL 437

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             +   + + +S +C +GR+DEA+  L +M   GL P ++ ++ +I    +     KA +
Sbjct: 438 LPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFE 497

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
            Y  M    ++P+     ++L+GL     + EA      +I      + + + +++D + 
Sbjct: 498 AYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFF 557

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K G++  A  L+ ++  + I P +V F++ I G  K G V +A  +   +   GL P+  
Sbjct: 558 KRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNF 617

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            Y + +  +C+ G +   L L + M  + + P   T  ++I GLCKQ +++ A+ +  DM
Sbjct: 618 AYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDM 677

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
           +  G++PD ITYNT+I  +CK  D+  A  L+N+M+     P   TYNI I G C +  +
Sbjct: 678 HQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRM 737

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             A  +L  L    I    V Y +++   C++  + +AM    ++++  F
Sbjct: 738 NRAVLMLDELVSAGIVPNTVTYNSMLNGVCSD-ILDRAMILTARLLKMAF 786



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 229/473 (48%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  +++ G  P  ++++ +I G C  G +       + M +   EP+A  Y+I+     
Sbjct: 253 LFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACC 312

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           +  + S A      ++ +G +P +VT+  +I  +C+ GNV E  KL + +   GF  N I
Sbjct: 313 IRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAI 372

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L++   K   ID+A  L  EM   G+ PD +T++IL+ G  K  +     +L  ++
Sbjct: 373 MYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDI 432

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               + P+       + GLC    + EA  +   ++       ++ +N +I  Y + G  
Sbjct: 433 SVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 492

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A + Y+ ++   ++PS  T +SL+ G   NG++ +A  L+  +   GL  + + +T  
Sbjct: 493 DKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVL 552

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ + + G++    +L  EME + I P  V ++  I GL KQ  ++EA  +  +M   G+
Sbjct: 553 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 612

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+   YN++I  FCKC  L +A +L   M    L P   T N++I GLC  G +++A  
Sbjct: 613 IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 672

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           + + + +  +S   + Y T+I  +C   D+  A     +M   G    +  Y 
Sbjct: 673 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYN 725



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 173/360 (48%), Gaps = 36/360 (10%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I + GLC   RL +A+ FL +   K   PS+++ N++++ Y + G  + A   + LM+ +
Sbjct: 446 ISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHF 505

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALE----------------FT--------------- 156
           GL P   + + L+ GL I G ++EA E                FT               
Sbjct: 506 GLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGA 565

Query: 157 ----NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
                +M R G+ PD + +S    G      +  A+ V  ++L KG  P+   Y  LICG
Sbjct: 566 QSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICG 625

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           +C+ G + E LKL +VM  +G   ++   ++++  +CK GR+  A+ +  +M   GL PD
Sbjct: 626 FCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPD 685

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           ++TY+ LI G CK   +  A  L N M +   +P+   +   + G C    +  A +  D
Sbjct: 686 IITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLD 745

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            L+ +  + + V YN M++G V    +  A+ L  +L++    P++VT N L+  F K G
Sbjct: 746 ELVSAGIVPNTVTYNSMLNG-VCSDILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQG 804



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 137/301 (45%), Gaps = 15/301 (4%)

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           +++G+ G   +L++ +I +   P   TF+ +I GFC+ G +     LL  +     EP+A
Sbjct: 242 LRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNA 301

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
             Y   +NA C  G     LA    M  +   PT VT+  VI   CK+  + EA +L + 
Sbjct: 302 FAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDG 361

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           +  +G +P+ I YNT++  + K +++ +A  L  +M    + P   T+NIL+ G    G 
Sbjct: 362 LKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGR 421

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT- 592
            ++ D LL  +    +   +  +   +   C  G + +AM F   M+EKG   SI  +  
Sbjct: 422 EEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNS 481

Query: 593 ------------KSF--FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
                       K+F  + +M+  G  P    C  +L+     G L    EL   MI+ G
Sbjct: 482 VIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKG 541

Query: 639 L 639
           L
Sbjct: 542 L 542



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 141/325 (43%), Gaps = 44/325 (13%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIM--WDLYDDIKVSETPRNV 63
           S  G + +A  +I +M E  L V+   +  LL    +  D++    L+ +++      +V
Sbjct: 522 SINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDV 581

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
              S  IDGL +Q  +++A     E   K   P+  + N+++  +CK G    A  L  +
Sbjct: 582 VAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKV 641

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   GL PD F+ N++I GLC  G M  A+    DM + G+ PD ITY+ L  G+     
Sbjct: 642 MRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFD 701

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG---------- 233
           +  A  ++ ++   GS+PD+ TY + I G+C    +   + + + ++S G          
Sbjct: 702 MVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNS 761

Query: 234 ------------------------FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
                                   F  NV+  ++LLS   K G  +  L   +++  +  
Sbjct: 762 MLNGVCSDILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEIPY 821

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQ 294
             D +TY I+       DK H  ++
Sbjct: 822 AFDEITYKIM-------DKAHHILE 839



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/322 (21%), Positives = 123/322 (38%), Gaps = 19/322 (5%)

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
           QDV+ + I   G ++ G++ E +     + E   S      +SL+  F        A  +
Sbjct: 163 QDVIWWVIARIGVLRSGDLVEFMWRGHHVYESDFS----VLDSLMRAFVNAEMGFQALEI 218

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L  ++  G+ PSA             G+   +  L +++  +   P   T++ +I G C+
Sbjct: 219 LGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCR 278

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
           +  +     LL  M      P+   YN +I + C       A    N M      PT  T
Sbjct: 279 KGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVT 338

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           +N +I+  C  G++  A  L   L+E   S   + Y T++  +    ++ +A   + +M 
Sbjct: 339 FNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMR 398

Query: 581 EKG-------FEISIRDYTK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
           +KG       F I +  + K             +   G  PD+ + ++ +      G L 
Sbjct: 399 KKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLD 458

Query: 626 SVFELAAVMIKSGLLPDKFLIN 647
              E    M++ GL P     N
Sbjct: 459 EAMEFLMDMLEKGLSPSIIAFN 480


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 243/479 (50%)

Query: 38  LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPS 97
           L  ++H   +  L   ++      ++ T SI+I+  C   ++  +   L +     + P+
Sbjct: 20  LVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPN 79

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
            + LN +M   C  G  + +      ++  G   D  SY IL++GLC  G    A++   
Sbjct: 80  TIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLR 139

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            +      PD + YS +  G      +  A+ +  ++  +G  PD++TYT LICG+C  G
Sbjct: 140 TIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAG 199

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            + E   L   M+ +    N+  Y+ L+ ++CK G++ E+  LL  M   G+KPD+V YS
Sbjct: 200 QLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYS 259

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           IL+ G C   +V KA Q++  M    ++P+ +++  I+ GLC+ + + EA      ++  
Sbjct: 260 ILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHK 319

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
           N I D V Y+ +IDG  KLG I   + L +++  +    ++VT+NSL+ G CKN  +  A
Sbjct: 320 NMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKA 379

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             L   +K  G++P+  TYT  ++  C+ G +++  AL Q +  K       TYTV+I G
Sbjct: 380 IALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISG 439

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           LCK+    EA+ +   M   G  P+ +T+  IIRS  +  +  KA +LL++M    L P
Sbjct: 440 LCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 242/491 (49%), Gaps = 15/491 (3%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P    +  ++  L         +  +  M   G+ PD +T SIL   F  L Q++ ++ V
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           + K+L  G  P+ +    L+ G C  G V++ L   + +++QGF+++ ++Y +LL+ +CK
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G    A+ LL  +E    +PD+V YS +I GLCK   V +A  LY+EM ++ I P+   
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C    + EA    + +I+ N   ++  YN +ID   K G + E+  L   + 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           +K + P +V ++ L+ G+C  G+V  A+++   +   G+ P   +Y   +N  C+   + 
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             + LL+EM  K + P  VTY+ +I GLCK  ++   + L ++M+  G   + +TYN+++
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLL 367

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CK ++L KA  L  +M    ++P   TY  LIDGLC  G LK    L   L      
Sbjct: 368 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYC 427

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIR--------DYTKSF 595
           +    YT +I   C EG   +A+    +M + G       FEI IR        D  +  
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKL 487

Query: 596 FCMMLSNGFPP 606
              M++ G  P
Sbjct: 488 LHEMIAKGLLP 498



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 246/496 (49%), Gaps = 1/496 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P ++    I+    K+        L   M   G+ PD  + +ILI+  C  G M  +   
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              + + G +P+ I  + L KG  L  ++  +     K++ +G   D V+Y +L+ G C+
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           IG     +KL   +  +  + +V+ YS ++  +CK   +DEA  L  EM A G+ PD++T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G C   ++ +A  L NEM  K I+PN + +  ++  LC++  + E++     + 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 DVV+Y+I++DGY  +G + +A Q++  +++  ++P + ++N +I G CK  +V 
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  LL  +    + P  VTY++ ++  C+ G I  +L L +EM  +      VTY  ++
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLL 367

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLCK   L +A+ L   M   G+ P++ TY  +I   CK   L+K   L   + +    
Sbjct: 368 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYC 427

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
               TY ++I GLC  G    A  +   ++++      V +  II++   + +  KA   
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKL 487

Query: 576 FCQMVEKGFEISIRDY 591
             +M+ KG  +  R++
Sbjct: 488 LHEMIAKGL-LPFRNF 502



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 242/473 (51%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++  L +       I   ++   K   P +V+L+ +++ +C LG    +  +   +LK G
Sbjct: 16  ILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLG 75

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P+    N L+ GLC+ G ++++L F + +   G + D ++Y IL  G   + +   A 
Sbjct: 76  YQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAI 135

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           K+++ +  + + PD+V Y+ +I G C+   V+E   L   M ++G   +VI Y+ L+   
Sbjct: 136 KLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGF 195

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C +G++ EA GLL EM    + P++ TY+ LI  LCK+ KV ++  L   M  K + P+ 
Sbjct: 196 CLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDV 255

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  ++ G C    + +A+  F  ++ +    DV  YNI+I+G  K   + EA+ L R+
Sbjct: 256 VIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLRE 315

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           ++ K + P  VT++SLI G CK G++     L   +   G   + VTY + ++  C+  N
Sbjct: 316 MLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQN 375

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           + + +AL  +M+ + I P   TYT +I GLCK  +L++   L + + V G   D  TY  
Sbjct: 376 LDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTV 435

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +I   CK     +A  + ++M  +   P + T+ I+I  L    +   A+ LL
Sbjct: 436 MISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLL 488



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 229/461 (49%), Gaps = 17/461 (3%)

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           KG  PD+VT ++LI  +C +G +     +   +L  G++ N I  + L+  +C  G + +
Sbjct: 39  KGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKK 98

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           +L    ++ A G + D V+Y IL+ GLCK  +   AI+L   +  +   P+   +  I+ 
Sbjct: 99  SLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIID 158

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           GLC+ +++ EA   +  +       DV+ Y  +I G+   G + EA  L  ++I K I+P
Sbjct: 159 GLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINP 218

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           +I T+N+LI   CK GKV +++ LL  +   G++P  V Y+  M+ YC  G +Q+   + 
Sbjct: 219 NIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIF 278

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
             M    + P   +Y ++I GLCK  ++ EA+ LL +M    + PD +TY+++I   CK 
Sbjct: 279 LVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKL 338

Query: 497 KDLRKAFQLLNQMWLHNLEPTS-ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
             +     L  +M  H  +P +  TYN L+DGLC N +L  A  L + ++E  I   K  
Sbjct: 339 GRITTILDLTKEMH-HRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYT 397

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MML 600
           YT +I   C  G + K    F  ++ KG+ I +  YT   S  C              M 
Sbjct: 398 YTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKME 457

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            NG  P+    E+++ +  +  +     +L   MI  GLLP
Sbjct: 458 DNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 188/402 (46%), Gaps = 15/402 (3%)

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +I +  +L S+ K       + L  +MEA G+ PDLVT SILI   C   ++  +  +  
Sbjct: 10  IIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLG 69

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           ++      PN+     ++ GLC K  + ++  + D ++      D V Y I+++G  K+G
Sbjct: 70  KILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIG 129

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
               A++L R + ++   P +V ++++I G CK+  V +A  L   +   G+ P  +TYT
Sbjct: 130 ETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYT 189

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T +  +C  G +     LL EM  K I P   TY  +I  LCK+ K++E+  LL  M   
Sbjct: 190 TLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKK 249

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           GV PD + Y+ ++  +C   +++KA Q+   M    + P   +YNI+I+GLC    +  A
Sbjct: 250 GVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEA 309

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---- 593
             LL  +   N+    V Y+++I   C  G +   +    +M  +G   ++  Y      
Sbjct: 310 MNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDG 369

Query: 594 -----------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
                      + F  M   G  P++     ++    +GG L
Sbjct: 370 LCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRL 411



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 139/310 (44%), Gaps = 41/310 (13%)

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           I  ++ +  ++   VK+ +    + L +Q+  K I P +VT + LI  FC  G++A +  
Sbjct: 7   IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           +L  I   G +P+ +   T M   C +G +++ L    ++  +      V+Y +++ GLC
Sbjct: 67  VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 460 KQWKLQEAVQLLE-----------------------------------DMYVIGVTPDQI 484
           K  + + A++LL                                    +M   G+ PD I
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TY T+I  FC    L +AF LLN+M L N+ P   TYN LID LC  G +K +  LL  +
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVM 246

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
            +  +    V Y+ ++  +C  G+V KA   F  MV+ G    +  Y       ++ NG 
Sbjct: 247 TKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYN------IIINGL 300

Query: 605 PPDQEICEVM 614
              + + E M
Sbjct: 301 CKGKRVDEAM 310


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 236/463 (50%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  ML     P    +  ++  +         L  +  M   G+  D  T +I+   F  
Sbjct: 62  FNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCH 121

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L+++   + V+ K+   G  PD  T+T LI G C  G + E L L + M+ +GF+ N + 
Sbjct: 122 LNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVT 181

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y  L+  +CK G    A+ LL  M     +P+++TY+ +I  L K  +V++A+ +++EM 
Sbjct: 182 YGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMI 241

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +K ISPN   + +I+ GLC+           + ++ S  + +VV++  ++D   K G + 
Sbjct: 242 AKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVT 301

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A  +   +I++ + P +VT+ +L+ G C   ++ +A ++ DT+   G  P+ ++Y+T +
Sbjct: 302 IAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLI 361

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YC+   I + + L +EM  + + P  VTY  +I GLC   +L++A+ L  +M   G  
Sbjct: 362 NGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQI 421

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +TY  ++   CK + L +A  +L  +   NL P   +YNI+IDG+C  G+L+ A  L
Sbjct: 422 PDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDL 481

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             SL    +      YT +I   C +G + +A   F +M   G
Sbjct: 482 FSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDG 524



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 240/490 (48%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PSVV    I++    +        L   M   G+  D ++  I+I+  C    ++     
Sbjct: 72  PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              + + G +PD  T++ L +G  +  +I  A  +  K++ +G  P+ VTY  LI G C+
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +GN    ++L   M+ +  + NVI Y+ ++  + K  +++EAL +  EM A G+ P++ T
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ +I GLCK  +      L NEM   +I PN      ++  LC++ M+T A    D +I
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 DVV Y  ++DG+     + EA +++  ++ K  +P+++++++LI G+CK  ++ 
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRID 371

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L + +    L P+ VTY T ++  C  G ++  +AL  EM      P  VTY +++
Sbjct: 372 KAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILL 431

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             LCK   L +A+ +L+ +    + PD  +YN +I   C+  +L  A  L + +    L 
Sbjct: 432 DYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLH 491

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TY I+I+GLC+ G L  A  L   +     S     Y  I +      +   A+  
Sbjct: 492 PDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQL 551

Query: 576 FCQMVEKGFE 585
             +M+ +GF 
Sbjct: 552 LQEMLGRGFS 561



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 238/493 (48%)

Query: 40  NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVV 99
           N++H   +  L   +     P +VYT +IVI+  C  +R+      L +       P   
Sbjct: 86  NMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTA 145

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           +   ++   C  G    A  LF  M+  G  P+  +Y  LIHGLC  G+   A+     M
Sbjct: 146 TFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSM 205

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
            +   EP+ ITY+ +        Q++ A  +  +++ KG  P++ TY  +I G C+    
Sbjct: 206 VQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEW 265

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           +    L   M+      NV+ ++ L+ ++CK G +  A  ++  M   G++PD+VTY+ L
Sbjct: 266 KHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTAL 325

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           + G C + ++ +A ++++ M  K  +PN  ++  ++ G C+ + I +A   F+ +     
Sbjct: 326 MDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQREL 385

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           + ++V YN +I G   +G + +A+ L+ +++     P +VT+  L+   CK   +  A  
Sbjct: 386 VPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMA 445

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           +L  I+   L P   +Y   ++  C  G ++    L   + +K + P   TYT++I GLC
Sbjct: 446 MLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLC 505

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
            Q  L EA +L  +M   G +PD  TYN I R F +  +   A QLL +M        ++
Sbjct: 506 LQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADAS 565

Query: 520 TYNILIDGLCVNG 532
           T  ++++ L  +G
Sbjct: 566 TITLIVEMLSDDG 578



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 224/514 (43%), Gaps = 15/514 (2%)

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           +++EAL   N M      P  + ++ +      +   S    + +++   G   D+ T  
Sbjct: 54  TIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLA 113

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           ++I  +C +  V+ G  +   +   G + +   ++ L+  +C  G+I EAL L  +M   
Sbjct: 114 IVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGE 173

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G +P+ VTY  LI GLCK      AI+L   M  K   PN   +  I+  L +   + EA
Sbjct: 174 GFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEA 233

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F  +I      +V  YN +I G  K         L  ++++ +I P++V F +L+  
Sbjct: 234 LNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDA 293

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G V  A  ++D +   G+EP  VTYT  M+ +C    +     +   M  K   P 
Sbjct: 294 LCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPN 353

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            ++Y+ +I G CK  ++ +A+ L E+M    + P+ +TYNT+I   C    LR A  L +
Sbjct: 354 VISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFH 413

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M      P   TY IL+D LC    L  A  +L +++  N++    +Y  +I   C  G
Sbjct: 414 EMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVG 473

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICE 612
           ++  A   F  +  KG    +  YT                  F  M ++G  PD     
Sbjct: 474 ELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYN 533

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
           ++   F +  +  S  +L   M+  G   D   I
Sbjct: 534 LITRGFLRNNETLSAIQLLQEMLGRGFSADASTI 567



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 221/459 (48%), Gaps = 3/459 (0%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLC 74
           V+AK+ +L  +    T+ +L+  L     + +   L+D +       N  T   +I GLC
Sbjct: 131 VLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLC 190

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +    + AI  L+    K   P+V++ N I+    K      A  +F  M+  G+ P+  
Sbjct: 191 KVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVS 250

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +YN +IHGLC     +      N+M    + P+ + ++ L         ++ A  V+  +
Sbjct: 251 TYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVM 310

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           + +G +PD+VTYT L+ G+C    ++E  K+ + M+ +G   NVI+YS L++  CK  RI
Sbjct: 311 IQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRI 370

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D+A+ L  EM    L P++VTY+ LI GLC   ++  AI L++EM +    P+   +  +
Sbjct: 371 DKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRIL 430

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           L  LC+   + +A     ++  SN   D+  YNI+IDG  ++G +  A  L+  L  K +
Sbjct: 431 LDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGL 490

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P + T+  +I G C  G +A+A +L   +   G  P   TY      +         + 
Sbjct: 491 HPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQ 550

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           LLQEM  +       T T++++ L      Q   Q+L +
Sbjct: 551 LLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHE 589



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 190/390 (48%), Gaps = 32/390 (8%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           V++A+ + ++M    +  ++ TYNS                                +I 
Sbjct: 230 VNEALNIFSEMIAKGISPNVSTYNS--------------------------------IIH 257

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           GLC+ S  +     + E    +  P+VV    ++   CK G   +A  +  +M++ G+ P
Sbjct: 258 GLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEP 317

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  +Y  L+ G C+   M+EA +  + M R G  P+ I+YS L  G+  + +I  A  + 
Sbjct: 318 DVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLF 377

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           +++  +   P+IVTY  LI G C +G + + + L   M++ G   +++ Y +LL  +CK+
Sbjct: 378 EEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKT 437

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
             +D+A+ +L  +E   L PD+ +Y+I+I G+C+  ++  A  L++ + SK + P+ + +
Sbjct: 438 RHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTY 497

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++ GLC + ++ EA   F  +    C  D   YN++  G+++      A+QL ++++ 
Sbjct: 498 TIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLG 557

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           +  S    T   ++     +G     +++L
Sbjct: 558 RGFSADASTITLIVEMLSDDGLDQSVKQIL 587


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 162/577 (28%), Positives = 265/577 (45%), Gaps = 46/577 (7%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVA 117
           PR   + ++V+     ++ + DA L          G  P V S N ++  + +      A
Sbjct: 79  PRFSESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDA 138

Query: 118 KGLFCLMLKYG-----LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
              F   L +G     + P+  +YNI++  LC  G ++ A+   + + R GV PD +TYS
Sbjct: 139 DAFFA-SLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYS 197

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  G     Q+  A  ++ ++   G   D V Y  L+ G  + G  E+ +K+ E ++  
Sbjct: 198 TLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRD 257

Query: 233 -GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
            G   N+  Y V+L  +CK GR  EA  +   M A   + D VTY ILI GLC+   V  
Sbjct: 258 PGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDS 317

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A ++Y++M    +  +   + +++ G CE     EA  ++DS   S  I+ +  YNIM  
Sbjct: 318 AARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSG-IRQITTYNIMTK 376

Query: 352 GYVKLGNIGEAVQLYRQL-IEKRISPSIVTFNSLIYG----------------------- 387
           G +  G + EA +L +QL  +   SP  VTF +LI+G                       
Sbjct: 377 GLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEE 436

Query: 388 ------------FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
                       FCK+G+  DA  +   +   G +P++  Y   +N +C    I   + +
Sbjct: 437 LDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKI 496

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
             EM +    PT +TY  +I GLCK  K QEA  L ++M   G  PD  TY ++IR  C+
Sbjct: 497 YIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCR 556

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
            K +  A ++ +++    L+     +NILI GLC  G +  A C+ + ++E N S   V 
Sbjct: 557 DKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVT 616

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           Y T++      G + KA + +  +++ G +  I  Y 
Sbjct: 617 YNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYN 653



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 148/575 (25%), Positives = 251/575 (43%), Gaps = 43/575 (7%)

Query: 3   AFVYSRTGMVHDAVFVIAKMKELDLKVS--IQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           AFV +R     DA F          +++  +QTYN +L +L      D    L+  ++  
Sbjct: 128 AFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRR 187

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +  T S ++ GL +  +L +A+  L E          V  NA++S   + G  E A
Sbjct: 188 GVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKA 247

Query: 118 KGLFCLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
             ++  +++  G  P+  +Y +++ GLC  G  +EA E  + M  +  + D +TY IL  
Sbjct: 248 MKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIH 307

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G      +  A +V   ++  G   D+  Y  LI G+C++G   E  K  +     G + 
Sbjct: 308 GLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR- 366

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEA-VGLKPDLVTYSILIRGLC----------- 284
            +  Y+++   +  SG + EA  LL ++E      PD VT+  LI GLC           
Sbjct: 367 QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEI 426

Query: 285 ------------------------KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
                                   K  + H A ++Y  M      PNS  + A++ G C 
Sbjct: 427 LEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCR 486

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              I +A   +  +  + C   ++ YN +IDG  K     EA  L ++++E+   P I T
Sbjct: 487 VSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRT 546

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           + SLI G C++ KV  A R+ D I   GL+   + +   ++  C  G +     +  EM+
Sbjct: 547 YASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMK 606

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            K   P  VTY  ++ G  +   + +A  L   +   G+ PD +TYNT I+  C C    
Sbjct: 607 EKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTP 666

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
           +   LLN++    + PT  T++IL+  +   G ++
Sbjct: 667 EGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/278 (20%), Positives = 111/278 (39%), Gaps = 28/278 (10%)

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
           S ++V  ++       +  +A  R   D   L G  P   ++ T ++A+          A
Sbjct: 84  SAALVVLSAFSRALMPDAALAAFR---DLPSLLGCNPGVRSHNTLLDAFVRARRYSDADA 140

Query: 435 LLQEMETKAIG----PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               +   A G    P   TY ++++ LC +  +  AV L   +   GV PD++TY+T++
Sbjct: 141 FFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLM 200

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL-QEHNI 549
               K   L  A  LL++M  + ++  +  YN L+ G    G  + A  +   L ++   
Sbjct: 201 SGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGA 260

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
           S     Y  ++   C  G   +A   + +M                    ++N    D  
Sbjct: 261 SPNLATYKVMLDGLCKLGRFKEAGEVWSRM--------------------MANNHQADTV 300

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              +++    + GD+ S   + + M+K+GL+ D  + N
Sbjct: 301 TYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYN 338


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 176/684 (25%), Positives = 306/684 (44%), Gaps = 42/684 (6%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +L   Y + G V DA   I  M E   K S+ + N++L  L     ++ +W    +    
Sbjct: 165 LLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDR 224

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           + P +V T +IV++ LC Q +L  A   LQ+       P+ V+ N I++ Y K G  + A
Sbjct: 225 KFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSA 283

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             +   M K G+  D ++YNI+I  LC       A      M    + PD  +Y+ L  G
Sbjct: 284 LRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHG 343

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE-----------GLKLR 226
           F    +I+ A  +  ++L +   P + TYT LI GYC+ G  +E           G++ R
Sbjct: 344 FFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPR 403

Query: 227 EV---------MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
           EV         ML+ G   +VI YS L++ MCK G I E   +L  M+  G+ P+ V Y+
Sbjct: 404 EVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYT 463

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            L+   CK     +A++ + ++    +  NS  H A+L     + MI EA  +   +   
Sbjct: 464 TLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRM 523

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
               DV  +N +ID Y + GN+ EA  +Y  ++     P I T+ SL+ G C+ G +  A
Sbjct: 524 KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQA 583

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
           +  +  +          T  T +   C+ G +   L L ++M T+ I P   TYT+++ G
Sbjct: 584 KEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDG 643

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL-HNLEP 516
            CK+ K+  A+ LL+ M   G+ PD I Y  ++        ++ A  +  ++     L  
Sbjct: 644 FCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYA 703

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
               YN +++G    G +   + L+ ++ E+ +  +  +Y  ++  +  +G + + +  +
Sbjct: 704 DCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLY 763

Query: 577 CQMVEKGFEISIRDYTKSFFCM-----------------MLSNGFPPDQEICEVMLIAFH 619
             MV++G +     Y    F +                 +  +G  P       ++ A  
Sbjct: 764 RDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKC 823

Query: 620 QGGDLGSVFELAAVMIKSGLLPDK 643
           + GD+   FEL   M   G++P +
Sbjct: 824 RVGDIDGAFELKEDMKALGVVPSE 847



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 161/638 (25%), Positives = 294/638 (46%), Gaps = 61/638 (9%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A  ++ +M+E++L     +YN+L++        ++   +++ +       +V T + +ID
Sbjct: 318 AYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALID 377

Query: 72  GLCQQSRLQDA--ILFLQETAGKE------------------FGPSVVSLNAIMSRYCKL 111
           G C+  R  +A  +L+  +  G                      P V++ +A+++  CK+
Sbjct: 378 GYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKM 437

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G     K +   M K G+ P+   Y  L+   C AG  +EAL++  D+ R G+  +++ +
Sbjct: 438 GMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIH 497

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + L   F+    I+ A +  Q +       D+ ++  +I  YCQ GNV E   + + M+ 
Sbjct: 498 NALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVR 557

Query: 232 QGFKLNVIAY-----------------------------------SVLLSSMCKSGRIDE 256
            G+  ++  Y                                   + LL  +CK G +DE
Sbjct: 558 HGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDE 617

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           AL L  +M    + PD  TY+IL+ G CK+ K+  A+ L   M  K + P++ A+  +L 
Sbjct: 618 ALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLN 677

Query: 317 GLCEKEMITEARMYFDSLIMSNCI-QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
           GL  +  +  A   F  +I    +  D + YN M++GY+K G I E  +L R + E  + 
Sbjct: 678 GLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVY 737

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           PS  ++N L++G+ K G+++    L   +   G++P  VTY   +   CE G I+  +  
Sbjct: 738 PSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKF 797

Query: 436 LQEM--ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           L++M  E   + P H  Y  +I   C+   +  A +L EDM  +GV P ++  ++I+R  
Sbjct: 798 LEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGL 857

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           CKC  + +A  + + +    + PT AT+  L+ GLC    + +A  L   ++   + +  
Sbjct: 858 CKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDV 917

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           V Y  +I   C +  +  A+  + +M  KG   +I  Y
Sbjct: 918 VTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTY 955



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 163/644 (25%), Positives = 283/644 (43%), Gaps = 62/644 (9%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           G +  A  ++ KMK   L  ++ TYN++L              + DD++ +    ++YT 
Sbjct: 244 GKLSKAESMLQKMKNCRLPNAV-TYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTY 302

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+ID LC+  R   A L L+        P   S N ++  +   G   +A  +F  ML+
Sbjct: 303 NIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLR 362

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEA------LEFTNDMGRH--------------GVEP 166
             L P   +Y  LI G C  G  +EA      ++ T    R               G++P
Sbjct: 363 QSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDP 422

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           D ITYS L  G   +  I    +++ ++   G  P+ V YT L+  +C+ G+ +E LK  
Sbjct: 423 DVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYF 482

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
             +   G   N + ++ LL S  + G I EA      M  + +  D+ +++ +I   C++
Sbjct: 483 VDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQR 542

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
             V +A  +Y+ M      P+   +G++L GLC+   + +A+ +   L+   C  D    
Sbjct: 543 GNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTL 602

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N ++ G  K G + EA+ L  +++ + I P   T+  L+ GFCK GK+  A  LL  +  
Sbjct: 603 NTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLE 662

Query: 407 HGLEPSAVTYT------------------------------------TFMNAYCEEGNIQ 430
            GL P  + YT                                    + MN Y + G I 
Sbjct: 663 KGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQIN 722

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
            +  L++ M    + P+  +Y +++ G  K+ +L   + L  DM   G+ PD +TY  +I
Sbjct: 723 EIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLI 782

Query: 491 RSFCKCKDLRKAFQLLNQMWLHN--LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
              C+   +  A + L +M L    L+P    Y  LI+  C  GD+  A  L   ++   
Sbjct: 783 FGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALG 842

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +  ++VA ++I++  C  G V +A+  F  ++  G   +I  +T
Sbjct: 843 VVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFT 886



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 227/459 (49%), Gaps = 3/459 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V + + +ID  CQ+  + +A           + P + +  +++   C+ G    AK   
Sbjct: 528 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 587

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +L+     D  + N L+ G+C  G+++EAL+    M    + PD  TY+IL  GF   
Sbjct: 588 VYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKR 647

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG-LKLREVMLSQGFKLNVIA 240
            +I  A  ++Q +L KG  PD + YT L+ G    G V+      +E++  +G   + IA
Sbjct: 648 GKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIA 707

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ +++   K G+I+E   L+  M    + P   +Y+IL+ G  K+ ++ + + LY +M 
Sbjct: 708 YNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMV 767

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM--SNCIQDVVLYNIMIDGYVKLGN 358
            + I P++  +  ++ GLCE  +I  A  + + +++  S        Y  +I+   ++G+
Sbjct: 768 KEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGD 827

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I  A +L   +    + PS V  +S++ G CK GKV +A  +  +I   G+ P+  T+TT
Sbjct: 828 IDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTT 887

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            M+  C+E  I     L Q ME+  +    VTY V+I GLC +  + +A+ L E+M   G
Sbjct: 888 LMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKG 947

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           + P+  TY T+  +      ++   +LL  +    + P+
Sbjct: 948 LLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 986



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/508 (25%), Positives = 226/508 (44%), Gaps = 49/508 (9%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL--YNLRHTDI-MWDLYDDIKVSETPRN 62
            + R GM+ +A      M  + +   + ++N ++  Y  R   +  + +YD++     P +
Sbjct: 504  FYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPD 563

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            + T   ++ GLCQ   L  A  F+     K       +LN ++   CK G  + A  L  
Sbjct: 564  ICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCE 623

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             M+   + PD ++Y IL+ G C  G +  AL     M   G+ PD I Y+ L  G     
Sbjct: 624  KMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEG 683

Query: 183  QISGAWKVIQKLL-------------------IKGSD-----------------PDIVTY 206
            Q+  A  + Q+++                   +KG                   P   +Y
Sbjct: 684  QVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASY 743

Query: 207  TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-- 264
             +L+ GY + G +   L L   M+ +G K + + Y +L+  +C+ G I+ A+  L +M  
Sbjct: 744  NILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVL 803

Query: 265  EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
            E  GL+P    Y  LI   C+   +  A +L  +M +  + P+  A  +I+ GLC+   +
Sbjct: 804  EESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKV 863

Query: 325  TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNS 383
             EA + F S++ +  +  +  +  ++ G  K   I +A  L +QL+E   +   +VT+N 
Sbjct: 864  EEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHL-KQLMESCGLKVDVVTYNV 922

Query: 384  LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
            LI G C    + DA  L + +K  GL P+  TY T   A    G +Q    LL+++E + 
Sbjct: 923  LITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRG 982

Query: 444  IGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
            I P++     +      +W+++ A++ L
Sbjct: 983  IVPSYKHPESL------EWRMENAIKRL 1004



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/418 (23%), Positives = 194/418 (46%), Gaps = 36/418 (8%)

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           L + F L+V   +++L+S+C  G++ +A  +L +M+   L P+ VTY+ ++    K+ + 
Sbjct: 222 LDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRC 280

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             A+++ ++M    I  + + +  ++  LC+ +    A +    +   N   D   YN +
Sbjct: 281 KSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTL 340

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           I G+   G I  A+ ++ Q++ + + PS+ T+ +LI G+C+NG+  +ARR+L  +++ G+
Sbjct: 341 IHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGV 400

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P  V+               +   +L+ M    I P  +TY+ +I G+CK   + E  +
Sbjct: 401 RPREVS---------------KAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKE 445

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +L  M   GV P+ + Y T++  FCK    ++A +    ++   L   S  +N L+    
Sbjct: 446 ILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFY 505

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             G +  A+     +    IS    ++  II ++C  G+V +A + +  MV         
Sbjct: 506 REGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVR-------- 557

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                       +G+PPD      +L    QGG L    E    +++     D+  +N
Sbjct: 558 ------------HGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLN 603



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/478 (23%), Positives = 195/478 (40%), Gaps = 71/478 (14%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP------------------------- 271
           N+ +  +L+++  K G++ +A   ++ M+  G K                          
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFL 218

Query: 272 ----------DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
                     D+ T +I++  LC Q K+ KA  +  +M + R+ PN+  +  IL    +K
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKK 277

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
                A    D +  +    D+  YNIMID   KL     A  L +++ E  ++P   ++
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N+LI+GF   GK+  A  + + +    L+PS  TYT  ++ YC  G       +L EM+ 
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI 397

Query: 442 KAIGPTHV--------------------TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             + P  V                    TY+ +I G+CK   + E  ++L  M   GV P
Sbjct: 398 TGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLP 457

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           + + Y T++  FCK    ++A +    ++   L   S  +N L+      G +  A+   
Sbjct: 458 NNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFK 517

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------- 591
             +    IS    ++  II ++C  G+V +A + +  MV  G+   I  Y          
Sbjct: 518 QYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQG 577

Query: 592 -----TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                 K F   +L      D++    +L+   + G L    +L   M+   +LPD +
Sbjct: 578 GHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTY 635



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 130/299 (43%), Gaps = 1/299 (0%)

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           +++++ YVK G + +A      + E     S+ + N+++       K       L     
Sbjct: 164 DLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLD 223

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
                   T    +N+ C +G + +  ++LQ+M+   + P  VTY  ++    K+ + + 
Sbjct: 224 RKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKS 282

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A+++L+DM   G+  D  TYN +I   CK K   +A+ LL +M   NL P   +YN LI 
Sbjct: 283 ALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIH 342

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           G    G +  A  +   +   ++  +   YT +I  +C  G   +A     +M   G   
Sbjct: 343 GFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRP 402

Query: 587 SIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                 K     ML++G  PD      ++    + G +    E+ + M KSG+LP+  L
Sbjct: 403 REVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVL 461


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 250/500 (50%), Gaps = 36/500 (7%)

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +  +L++A+  + E   +   PS  +LN ++     +G  E+A+ +F  M + G+ PD  
Sbjct: 166 ENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCV 225

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           S+ +++   C  G + EA  + N M   G   D  T +++   F     ++       K+
Sbjct: 226 SFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKM 285

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           +  G  P+++ +T LI G C+ G++++  +L E M+ +G+K NV  ++ L+  +CK G  
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345

Query: 255 DEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           ++A  L  ++  + G KP++ TY+ +I G CK+DK+++A  L + M  + + PN+     
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT--- 402

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
                                           Y  +IDG+ K+GN   A +L   + ++ 
Sbjct: 403 --------------------------------YTTLIDGHCKVGNFVRAYELMDLMGKEG 430

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
            SP+I T+N++I G CK G + +A RLL+ + +HGL+   VTYT  M+ +C + +  R L
Sbjct: 431 FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSL 490

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
               +M      P   +YT +I   C+Q +++E+ +L E+   +G+ P + TY ++I  +
Sbjct: 491 VFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGY 550

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C+  +   A +L  +M  H   P S TY  LI GLC    L +A  L  ++ +  +S  +
Sbjct: 551 CRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCE 610

Query: 554 VAYTTIIKAHCAEGDVHKAM 573
           V   T+   +C + D   A+
Sbjct: 611 VTRLTLAYEYCKKDDSSTAI 630



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 217/439 (49%), Gaps = 1/439 (0%)

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G ++EA+    +M   G+ P   T + +      +  +  A  +  ++  +G  PD V++
Sbjct: 168 GKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            +++   C +G V E  +    M+ +GF ++    ++++ + C+ G ++  +G  ++M  
Sbjct: 228 KLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVE 287

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           +GL P+++ ++ LI GLCKQ  + +A +L  EM  +   PN + H  ++ GLC+K    +
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEK 347

Query: 327 ARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           A   F  L+ S+  + +V  Y  MI+GY K   +  A  L  ++ E+ + P+  T+ +LI
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G CK G    A  L+D +   G  P+  TY   ++  C++G++     LL ++    + 
Sbjct: 408 DGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQ 467

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
              VTYT+++   C+Q     ++     M  +G TPD  +Y T+I +FC+ K ++++ +L
Sbjct: 468 ADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERL 527

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
             +     L PT  TY  +I G C  G+   A  L   +  H  +   + Y  +I   C 
Sbjct: 528 FEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCK 587

Query: 566 EGDVHKAMTFFCQMVEKGF 584
           E  +  A   +  M++KG 
Sbjct: 588 ESKLDDARNLYDAMMDKGL 606



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 209/404 (51%), Gaps = 4/404 (0%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +++ID  CQ+  +   + +  +       P+V++  A+++  CK G  + A  L   M
Sbjct: 261 TCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEM 320

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           ++ G  P+ +++  LI GLC  G  E+A   F   +   G +P+  TY+ +  G+    +
Sbjct: 321 VRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDK 380

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           ++ A  ++ ++  +G  P+  TYT LI G+C++GN     +L ++M  +GF  N+  Y+ 
Sbjct: 381 LNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNA 440

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++  +CK G +DEA  LL ++   GL+ D VTY+IL+   C+Q   ++++  +N+M    
Sbjct: 441 IIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVG 500

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +P+  ++  ++   C ++ + E+   F+  +    I     Y  MI GY + GN   AV
Sbjct: 501 FTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAV 560

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L++++     +P  +T+ +LI G CK  K+ DAR L D +   GL P  VT  T    Y
Sbjct: 561 KLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEY 620

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           C++ +    + +L  +E +       T   +++ LC + KL  A
Sbjct: 621 CKKDDSSTAINVLDRLEKRQWIR---TVNTLVRKLCSEGKLDMA 661



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 204/415 (49%), Gaps = 16/415 (3%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ +  ++G++ EA+ ++ EM+  GL P   T + ++        V  A  ++ EMC + 
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           +SP+  +   +++  C    + EA  + ++++    I D     ++ID + + G +   V
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
             + +++E  ++P+++ F +LI G CK G +  A  LL+ +   G +P+  T+TT ++  
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 424 CEEGNIQRLLAL-LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           C++G  ++   L L+ + +    P   TYT +I G CK+ KL  A  LL  M   G+ P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             TY T+I   CK  +  +A++L++ M      P   TYN +IDGLC  G L  A  LL 
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCMM- 599
            +  H +    V YT ++  HC + D ++++ FF +M++ GF   I  YT   S FC   
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQK 519

Query: 600 ------------LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                       +S G  P ++    M+  + + G+     +L   M   G  PD
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPD 574



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 184/390 (47%), Gaps = 4/390 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   + +I+GLC+Q  ++ A   L+E   + + P+V +   ++   CK G+ E A  LF
Sbjct: 293 NVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLF 352

Query: 122 CLMLKY-GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             +++  G  P+  +Y  +I+G C    +  A    + M   G+ P+  TY+ L  G   
Sbjct: 353 LKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCK 412

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +     A++++  +  +G  P+I TY  +I G C+ G+++E  +L   +   G + + + 
Sbjct: 413 VGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVT 472

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y++L+S  C+    + +L    +M  VG  PD+ +Y+ LI   C+Q ++ ++ +L+ E  
Sbjct: 473 YTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAV 532

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           S  + P    + +++ G C     + A   F  +    C  D + Y  +I G  K   + 
Sbjct: 533 SLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLD 592

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  LY  +++K +SP  VT  +L Y +CK    + A  +LD ++         T  T +
Sbjct: 593 DARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLV 649

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
              C EG +        ++  K      VT
Sbjct: 650 RKLCSEGKLDMAALFFHKLLDKEPNVNRVT 679



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 180/378 (47%), Gaps = 7/378 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR-NV 63
           + G +  A  ++ +M     K ++ T+ +L+  L     T+  + L+  +  S+  + NV
Sbjct: 306 KQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNV 365

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T + +I+G C++ +L  A + L     +   P+  +   ++  +CK+G    A  L  L
Sbjct: 366 HTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDL 425

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M K G  P+ ++YN +I GLC  GS++EA    N +  HG++ D +TY+IL       + 
Sbjct: 426 MGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQAD 485

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
            + +     K+L  G  PDI +YT LI  +C+   ++E  +L E  +S G       Y+ 
Sbjct: 486 TNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTS 545

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++   C+ G    A+ L   M   G  PD +TY  LI GLCK+ K+  A  LY+ M  K 
Sbjct: 546 MICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKG 605

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           +SP       +    C+K+  + A    D L     I+ V   N ++      G +  A 
Sbjct: 606 LSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTV---NTLVRKLCSEGKLDMAA 662

Query: 364 QLYRQLIEKRISPSIVTF 381
             + +L++K  + + VT 
Sbjct: 663 LFFHKLLDKEPNVNRVTL 680



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 142/321 (44%), Gaps = 14/321 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI-----MWDLYDDIKVSETP 60
           Y +   ++ A  ++++M+E  L  +  TY +L+    H  +      ++L D +      
Sbjct: 375 YCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDG--HCKVGNFVRAYELMDLMGKEGFS 432

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N+YT + +IDGLC++  L +A   L + +        V+   +MS +C+      +   
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  MLK G  PD  SY  LI   C    M+E+     +    G+ P   TY+ +  G+  
Sbjct: 493 FNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCR 552

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
               S A K+ Q++   G  PD +TY  LI G C+   +++   L + M+ +G     + 
Sbjct: 553 YGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVT 612

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
              L    CK      A+ +L  +E    +  + T + L+R LC + K+  A   ++++ 
Sbjct: 613 RLTLAYEYCKKDDSSTAINVLDRLEK---RQWIRTVNTLVRKLCSEGKLDMAALFFHKLL 669

Query: 301 SKRISPNSFAHGAILLGLCEK 321
            K   PN   +   LLG   K
Sbjct: 670 DK--EPN--VNRVTLLGFMNK 686



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 128/300 (42%), Gaps = 21/300 (7%)

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           M+  + + G + EAV +  ++  + + PS  T N ++      G V  A  +   +   G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P  V++   + A C  G +      L  M  +     + T T++I   C++  +   V
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
                M  +G+ P+ I +  +I   CK   +++AF+LL +M     +P   T+  LIDGL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKV-AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           C  G  + A  L + L   +     V  YT +I  +C E  +++A     +M E+G   +
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              YT       L +G       C+V        G+    +EL  +M K G  P+ +  N
Sbjct: 400 TNTYTT------LIDGH------CKV--------GNFVRAYELMDLMGKEGFSPNIYTYN 439


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 166/628 (26%), Positives = 289/628 (46%), Gaps = 30/628 (4%)

Query: 31  IQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA 90
           ++  N+LL  L    +  D+ + +      RN+ T + +I+  C    +  A   L    
Sbjct: 41  LRCLNTLLMALARHRMFPDM-ESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLL 99

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
                P   +  + +  YC+ G    A  +F LM   G    AF+Y  L+HGL  AG + 
Sbjct: 100 HAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVR 159

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           EA+     M      PD   Y+ +  G     +   A  ++++ +  G +P+IV Y  LI
Sbjct: 160 EAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALI 219

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            GYC  G +E  LK+ E M       NV  Y+ L+  +CKSG+++ A+ L   M   GL+
Sbjct: 220 DGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLE 279

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P++VTY+ LI+G C +  +  A +L + M +  + PN +    ++  LC++E + EA+++
Sbjct: 280 PNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLF 339

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
             SL+      + V+Y  +IDG  K G I  A +L +++I +   P   +++SLI G C+
Sbjct: 340 LGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCR 399

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
             K++ A  +L+ +   G++ S VTYT  ++    E   +    +  +M    I P  VT
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVT 459

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           YTV ++  C++ ++++A  ++  M   GV P+ +TYNT+IR +     + +AF     M 
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519

Query: 511 LHNLEPTSATYNILIDGLCVN-------------GDLKNADCLLVSLQEHNISLTKVAYT 557
               +P   +Y +L+  L V               D+K+   LL  + E  + L    Y+
Sbjct: 520 GKGWKPNEDSYTVLLR-LVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYS 578

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC---------------MMLSN 602
             I+  C    + +A  FF  M       S   YT    C                M  +
Sbjct: 579 CFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKS 638

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFEL 630
           G+ P  E   +++ +  +GG+  +  E+
Sbjct: 639 GYLPHLESYRIIISSLCEGGNFRTAKEV 666



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 155/597 (25%), Positives = 287/597 (48%), Gaps = 15/597 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y R GM+  A  V   M       +  TY +LL+ L    ++ +   ++  ++      +
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +  + ++ GLC+  R ++A + L+E     F P++V  NA++  YC  G  E A  +F 
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M      P+  +Y  LIHGLC +G +E A+   + M   G+EP+ +TY+ L +G     
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A++++  +   G  P+  T++VLI   C+   VEE       ++ +G K+N + Y+
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +CK+G+ID A  L+ +M + G  PD  +YS LI GLC+Q K+ +A  +  +M  K
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I  +   +  I+  L  +      +  FD +I +    D+V Y + +  Y + G + +A
Sbjct: 417 GIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDA 476

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +  Q++++ + P++VT+N+LI G+   G V+ A    + +   G +P+  +YT  +  
Sbjct: 477 ESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRL 536

Query: 423 YCEE------------GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
             ++             +++ L  LL+++  + +      Y+  I+ LC+  +L+EA   
Sbjct: 537 VVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHF 596

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
              M    +TP +  Y +II   C+ K L  A  LL+ M      P   +Y I+I  LC 
Sbjct: 597 FMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCE 656

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
            G+ + A  +   L     +  ++ +  +I     +G V +  +    M E G++ S
Sbjct: 657 GGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS 713


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 242/475 (50%), Gaps = 3/475 (0%)

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           KL         +  +L+ GL P+   YN +I+ LC  G++ +A    N + + G++PD  
Sbjct: 205 KLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTF 264

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           TY+ +  G+     +  A+++  ++  +G +P+  TY+ LI G C  G V E L     M
Sbjct: 265 TYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEM 324

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
              G    V  ++  + ++C  GRI++A  +  +M+  G KP++ TY+ LI G   Q   
Sbjct: 325 TRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVS 381

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             AI L++ M    + PN+  + A++  L E   I  A + F+ +    C+ +   YN +
Sbjct: 382 RMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNEL 441

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           I GY  +G+  +A+ +   +++ R +P++VT+N +I G+C +G    A R+L+ +K +G 
Sbjct: 442 IRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGC 501

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           +P   +YT  ++ +C+   ++    +  EM  + + P  VTYT +I G CK  KL  A +
Sbjct: 502 QPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAAR 561

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +LE M   G  P+  TYN +I    K  +   A +L   M    + P   TY+ +I+GLC
Sbjct: 562 MLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLC 621

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            NG +  A  +   + +H        Y+++I+A   EG V +A   F ++ ++G 
Sbjct: 622 NNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGL 676



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 163/598 (27%), Positives = 284/598 (47%), Gaps = 24/598 (4%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G V DA  +I K+ +  +K    TY S++      R  D  +++++ +       N  
Sbjct: 240 KDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAA 299

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S +I+GLC   R+ +A+ F+ E       P+V +  A +   C +G  E A  +F  M
Sbjct: 300 TYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDM 359

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K G  P+ ++Y  LI G  ++     A+   + M R GV P+ +TY+ L        +I
Sbjct: 360 KKKGCKPNVYTYTSLISGQRVS---RMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEI 416

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  V   +   G  P+  +Y  LI GYC IG+ E+ + +   ML       ++ Y+++
Sbjct: 417 DSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNII 476

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   C SG  D A+ +L  M+A G +PD  +Y+ LI G CK  K+  A  ++NEM  + +
Sbjct: 477 IKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGL 536

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN   + A++ G C+ E +  A    + +  S C  +V  YN++I G  K  N   A +
Sbjct: 537 CPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 596

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L + ++E++ISP +VT++++I G C NG +  A  + + +  HG  P+  TY++ + A  
Sbjct: 597 LCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALG 656

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +EG ++    +  E++ + + P  VTY  +I+      K+  A   L +M   G  P   
Sbjct: 657 QEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQ 716

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE--PTSATYNILIDGLCVNGDLKNADCLLV 542
           TY+ +I+             L N+M  H L   P +A+ +   D + +N D+     L  
Sbjct: 717 TYDVLIKG------------LQNEMVYHKLVALPNAASTSTFDDQI-INKDV--ISVLSS 761

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
            L E +  L++  Y  ++      G   +A   +  MV +  +   +D  K F   +L
Sbjct: 762 KLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQS-QCPNQDTYKHFLISLL 818



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/539 (27%), Positives = 254/539 (47%), Gaps = 41/539 (7%)

Query: 28  KVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAIL 84
           K+ + TY +LL  L     T  + D Y  I       N+   + VI+ LC+   ++DA  
Sbjct: 190 KMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAES 249

Query: 85  FLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
            + +       P   +  +++  YC+    + A  +F  M + G  P+A +Y+ LI+GLC
Sbjct: 250 IINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLC 309

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
            +G + EAL+F ++M RHGV P   T++        + +I  AWK+   +  KG  P++ 
Sbjct: 310 NSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVY 369

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TYT LI G  ++  +  GL  R  M   G   N + Y+ L++ + ++  ID AL +   M
Sbjct: 370 TYTSLISGQ-RVSRMAIGLFHR--MSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMM 426

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              G  P+  +Y+ LIRG C      KA+ +   M   R +P    +  I+ G C+    
Sbjct: 427 GKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDT 486

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
             A    + +  + C  D   Y  +I G+ K+  +  A  ++ +++++ + P+ VT+ +L
Sbjct: 487 DVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTAL 546

Query: 385 IYGFCKNGKVADARRLLDTIK--------------LHGL--------------------- 409
           I G+CK+ K+  A R+L+ +K              +HGL                     
Sbjct: 547 ISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKI 606

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P  VTY+T +N  C  G I   L +  +M      P   TY+ +I+ L ++ +++EA +
Sbjct: 607 SPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEE 666

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +  ++   G+ PD++TY  +I        + +AF  L +M     +PT  TY++LI GL
Sbjct: 667 MFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 238/510 (46%), Gaps = 23/510 (4%)

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
           F+Y  L+  L         ++  + + R G++P+ + Y+ +         +  A  +I K
Sbjct: 194 FTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINK 253

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +   G  PD  TYT +I GYC+  +++   ++   M  +G + N   YS L++ +C SGR
Sbjct: 254 VFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGR 313

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           ++EAL  + EM   G+ P + T++  I  LC   ++  A +++ +M  K   PN + + +
Sbjct: 314 VNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTS 373

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++ G     M   A   F  +     + + V YN +++  ++   I  A+ ++  + +  
Sbjct: 374 LISGQRVSRM---AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHG 430

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
             P+  ++N LI G+C  G    A  +L  +      P+ VTY   +  YC+ G+    +
Sbjct: 431 CLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAI 490

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            +L+ M+     P   +YT +I G CK  K++ A  +  +M   G+ P+++TY  +I  +
Sbjct: 491 RVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGY 550

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           CK + L  A ++L +M      P   TYN+LI GL    +   A+ L   + E  IS   
Sbjct: 551 CKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDV 610

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
           V Y+T+I   C  G +  A+  F +MV+ G   ++  Y+                     
Sbjct: 611 VTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSS-------------------- 650

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           ++ A  Q G +    E+ + + K GL+PD+
Sbjct: 651 LIQALGQEGRVEEAEEMFSELKKQGLIPDE 680



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 146/593 (24%), Positives = 261/593 (44%), Gaps = 28/593 (4%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNS---LLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           +G V++A+  I++M    +  ++ T+ +    L ++   +  W ++ D+K      NVYT
Sbjct: 311 SGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYT 370

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + +I G  + SR+  AI      +     P+ V+ NA+M+   +    + A  +F +M 
Sbjct: 371 YTSLISGQ-RVSRM--AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMG 427

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K+G  P+  SYN LI G C  G  E+A+    +M +    P  +TY+I+ KG+       
Sbjct: 428 KHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTD 487

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A +V++ +   G  PD  +YT LI G+C+I  +E    +   M+ +G   N + Y+ L+
Sbjct: 488 VAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALI 547

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           S  CK  ++D A  +L  M+  G +P++ TY++LI GL KQ+    A +L   M  ++IS
Sbjct: 548 SGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKIS 607

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+   +  ++ GLC    I  A   F+ ++   C+ ++  Y+ +I    + G + EA ++
Sbjct: 608 PDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEM 667

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           + +L ++ + P  VT+  +I     +GKV  A   L  +   G +P+  TY   +     
Sbjct: 668 FSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQN 727

Query: 426 EGNIQRLLALLQEMETKAIGPTHVT----------------------YTVVIKGLCKQWK 463
           E    +L+AL     T       +                       Y  ++  L +  +
Sbjct: 728 EMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGR 787

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
             EA  L   M      P+Q TY   + S  +   +  A  +   M     E     Y  
Sbjct: 788 WFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKE 847

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           LI  LC     K A  +   +    ++  ++ +T +I      G     M F 
Sbjct: 848 LICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFL 900



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 132/574 (22%), Positives = 234/574 (40%), Gaps = 61/574 (10%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIV 69
           G + DA  +   MK+   K ++ TY SL+   R + +   L+  +       N  T + +
Sbjct: 347 GRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNAL 406

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           ++ L +   +  A++           P+  S N ++  YC +G  E A  +   MLK   
Sbjct: 407 MNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRP 466

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P   +YNI+I G C +G  + A+     M  +G +PD  +Y+ L  GF  +S++  A  
Sbjct: 467 TPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASG 526

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           +  +++ +G  P+ VTYT LI GYC+   ++   ++ E M   G + NV  Y+VL+  + 
Sbjct: 527 MFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLT 586

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K      A  L   M    + PD+VTYS +I GLC    +  A++++N+M      PN  
Sbjct: 587 KQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLH 646

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ----- 364
            + +++  L ++  + EA   F  L     I D V Y  MI+  V  G +  A       
Sbjct: 647 TYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEM 706

Query: 365 -----------------------LYRQLIEKRISPSIVTFN------------------- 382
                                  +Y +L+    + S  TF+                   
Sbjct: 707 INAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAEL 766

Query: 383 ----------SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
                     +L+    ++G+  +A  L  ++      P+  TY  F+ +      +   
Sbjct: 767 DFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLA 826

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           + + + M  +        Y  +I  LC+  + +EA  + E M    +  D+I +  +I  
Sbjct: 827 MDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILING 886

Query: 493 FCKC--KDLRKAFQLLNQMWLHNLEPTSATYNIL 524
                 KDL    + L+ M  +   P+S    IL
Sbjct: 887 LLGAGYKDL--CMEFLHIMETNRRNPSSHARTIL 918



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/371 (22%), Positives = 153/371 (41%), Gaps = 49/371 (13%)

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
           K  +T+A  Y D          +  Y  ++    KL      +  Y Q++ + + P+++ 
Sbjct: 171 KAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLI 230

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +NS+I   CK+G V DA  +++ +   G++P   TYT+ +  YC   ++     +   M+
Sbjct: 231 YNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMD 290

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK----- 495
            +   P   TY+ +I GLC   ++ EA+  + +M   GV P   T+   I + C      
Sbjct: 291 EEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIE 350

Query: 496 -------------CKD--------------LRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
                        CK                R A  L ++M    + P + TYN L++ L
Sbjct: 351 DAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVL 410

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG----- 583
             N ++ +A  +   + +H       +Y  +I+ +C  GD  KAM+    M+ KG     
Sbjct: 411 MENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNML-KGRPTPT 469

Query: 584 ---FEISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
              + I I+ Y  S           +M +NG  PD+     ++  F +   +     +  
Sbjct: 470 LVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFN 529

Query: 633 VMIKSGLLPDK 643
            M+  GL P++
Sbjct: 530 EMMDRGLCPNE 540



 Score = 42.0 bits (97), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 10/170 (5%)

Query: 14  DAVFVIA-KMKELDLKVSIQTYNSLLYNLRHTDIMW----DLYDD-IKVSETP-RNVYTN 66
           D + V++ K+ ELD ++S Q Y++LL  L  +   W    +LY   +  S+ P ++ Y +
Sbjct: 754 DVISVLSSKLAELDFELSRQLYDALLSRLSRSG-RWFEANNLYRSMVSQSQCPNQDTYKH 812

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
            ++   L +  ++  A+   +  + +     +     ++   C+L   + A+ +F  ML 
Sbjct: 813 FLI--SLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLS 870

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
             L+ D   + ILI+GL  AG  +  +EF + M  +   P +   +ILA+
Sbjct: 871 RALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPSSHARTILAR 920



 Score = 42.0 bits (97), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 62/151 (41%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           Y+ L+  L  +G   EA      M      P+  TY           ++  A  V + + 
Sbjct: 775 YDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMS 834

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
            +  +  +  Y  LIC  CQ+   +E   + E MLS+    + I +++L++ +  +G  D
Sbjct: 835 DQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKD 894

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
             +  L+ ME     P     +IL R   K+
Sbjct: 895 LCMEFLHIMETNRRNPSSHARTILAREALKE 925


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 161/586 (27%), Positives = 271/586 (46%), Gaps = 57/586 (9%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NVY ++I++ GLC+      A+  L+E                                 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLRE--------------------------------- 167

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M +  L PD FSYN +I G C    +E+ALE  N+M   G     +T+ IL   F   
Sbjct: 168 --MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A   ++++   G + D+V YT LI G+C  G ++ G  L + +L +G     I Y
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   CK G++ EA  +   M   G++P++ TY+ LI GLC   K  +A+Q  N M  
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIE 345

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   PN+  +  I+  LC+  ++ +A    + +       D + YNI++ G    G++ E
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405

Query: 362 AVQLYRQLIEKR--ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           A +L   +++      P ++++N+LI+G CK  ++  A  + D +         VT    
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N+  + G++ + + L +++    I     TYT +I G CK   L  A  LL  M V  +
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P    YN ++ S CK   L +A++L  +M   N  P   ++NI+IDG    GD+K+A+ 
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           LLV +    +S     Y+ +I      G + +A++FF +MV+ GFE              
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE-------------- 631

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                 PD  IC+ +L      G+   + EL   ++   ++ DK L
Sbjct: 632 ------PDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 270/531 (50%), Gaps = 15/531 (2%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           SLL  +R   +M D             V++ + VI G C+   L+ A+    E  G    
Sbjct: 163 SLLREMRRNSLMPD-------------VFSYNTVIRGFCEGKELEKALELANEMKGSGCS 209

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
            S+V+   ++  +CK G  + A G    M   GL  D   Y  LI G C  G ++     
Sbjct: 210 WSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL 269

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            +++   G  P AITY+ L +GF  L Q+  A ++ + ++ +G  P++ TYT LI G C 
Sbjct: 270 FDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG 329

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +G  +E L+   +M+ +  + N + Y+++++ +CK G + +A+ ++  M+    +PD +T
Sbjct: 330 VGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNIT 389

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMC--SKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           Y+IL+ GLC +  + +A +L   M   S    P+  ++ A++ GLC++  + +A   +D 
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L+      D V  NI+++  +K G++ +A++L++Q+ + +I  +  T+ ++I GFCK G 
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           +  A+ LL  +++  L+PS   Y   +++ C+EG++ +   L +EM+     P  V++ +
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I G  K   ++ A  LL  M   G++PD  TY+ +I  F K   L +A    ++M    
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
            EP +   + ++      G+      L+  L + +I L K    T++   C
Sbjct: 630 FEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/548 (27%), Positives = 260/548 (47%), Gaps = 57/548 (10%)

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
           VSL+ ++  Y ++     A G+  LMLK G   + +++NIL+ GLC      +A+    +
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M R+ + PD                                   + +Y  +I G+C+   
Sbjct: 168 MRRNSLMPD-----------------------------------VFSYNTVIRGFCEGKE 192

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           +E+ L+L   M   G   +++ + +L+ + CK+G++DEA+G L EM+ +GL+ DLV Y+ 
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           LIRG C   ++ +   L++E+  +  SP +  +  ++ G C+   + EA   F+ +I   
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              +V  Y  +IDG   +G   EA+Q    +IEK   P+ VT+N +I   CK+G VADA 
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM--ETKAIGPTHVTYTVVIK 456
            +++ +K     P  +TY   +   C +G++     LL  M  ++    P  ++Y  +I 
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLCK+ +L +A+ + + +       D++T N ++ S  K  D+ KA +L  Q+    +  
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            S TY  +IDG C  G L  A  LL  ++   +  +   Y  ++ + C EG + +A   F
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
            +M         RD           N F PD     +M+    + GD+ S   L   M +
Sbjct: 553 EEMQ--------RD-----------NNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592

Query: 637 SGLLPDKF 644
           +GL PD F
Sbjct: 593 AGLSPDLF 600



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 196/402 (48%), Gaps = 3/402 (0%)

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           Q+  A  V Q+ +  GS       + L+    +  N E        ML     +N ++ S
Sbjct: 53  QLKNAVSVFQQAVDSGSSLAFAG-SNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            LL    +  +   A G+L  M   G   ++  ++IL++GLC+  +  KA+ L  EM   
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+ F++  ++ G CE + + +A    + +  S C   +V + I+ID + K G + EA
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +   +++    +   +V + SLI GFC  G++   + L D +   G  P A+TY T +  
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +C+ G ++    + + M  + + P   TYT +I GLC   K +EA+Q L  M      P+
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPN 351

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL- 541
            +TYN II   CK   +  A +++  M      P + TYNIL+ GLC  GDL  A  LL 
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411

Query: 542 VSLQEHNISLTKV-AYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           + L++ + +   V +Y  +I   C E  +H+A+  +  +VEK
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 226/495 (45%), Gaps = 40/495 (8%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
            + + G + +A+  + +MK + L+  +  Y SL                           
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL--------------------------- 253

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
                I G C    L        E   +   P  ++ N ++  +CKLG  + A  +F  M
Sbjct: 254 -----IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G+ P+ ++Y  LI GLC  G  +EAL+  N M     EP+A+TY+I+         +
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML--SQGFKLNVIAYS 242
           + A ++++ +  + + PD +TY +L+ G C  G+++E  KL  +ML  S     +VI+Y+
Sbjct: 369 ADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYN 428

Query: 243 VLLSSMCKSGRIDEAL---GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            L+  +CK  R+ +AL    LL E    G   D VT +IL+    K   V+KA++L+ ++
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAMELWKQI 485

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
              +I  NS  + A++ G C+  M+  A+     + +S     V  YN ++    K G++
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A +L+ ++      P +V+FN +I G  K G +  A  LL  +   GL P   TY+  
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N + + G +   ++   +M      P       V+K    Q +  +  +L++ +    +
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665

Query: 480 TPDQITYNTIIRSFC 494
             D+    T++   C
Sbjct: 666 VLDKELTCTVMDYMC 680


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 165/576 (28%), Positives = 283/576 (49%), Gaps = 26/576 (4%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P     +A+ S + +LG  E A   F  M ++ + P A S N  ++ L   G  + + +F
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             DM   G+     TY+I+         +  A  +  ++   G  PDIVTY  LI GY +
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGK 299

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +G ++E   L E M   G + +VI Y+ L++  CK  ++ +A   L+EM+  GLKP++VT
Sbjct: 300 LGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVT 359

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           YS LI  LCK+  + +AI+   +M    +SPN F + +++   C+   +++A    D ++
Sbjct: 360 YSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEML 419

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 +VV Y  ++DG  K G + EA  L+R +I+  ++P++ T+ +L++G  KN +V 
Sbjct: 420 QVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVE 479

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  LL  IK   ++P  + Y T +   C +  ++    ++ EM+   I    V YT+ +
Sbjct: 480 NALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRM 539

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
               K  K  EA+ LL++M  +GV    +T+  +I   CK   + +A     +M   NL+
Sbjct: 540 DAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQ 599

Query: 516 PTS-ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
           P + A    LIDGLC N  ++ A  L   +Q+ N+   K+AYT +I  +    D  +A+ 
Sbjct: 600 PNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALN 659

Query: 575 FFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFH 619
              +M E G E+ +  YT               + F   M+  G  PD+ +C  +L  ++
Sbjct: 660 IRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYY 719

Query: 620 QGGDLGSVFELAAVMIK----------SGLLPDKFL 645
           + G +    EL   ++K            L+P+K L
Sbjct: 720 ELGSIDEAIELHDELLKKVPLDELLEEQNLMPEKIL 755



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 148/512 (28%), Positives = 248/512 (48%), Gaps = 10/512 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPR 61
           V+   GM+ +A    ++M    +    ++ N+ LY L  T   D+    + D+  +   +
Sbjct: 191 VFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQ 250

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+T +I+I  +C++  +  A     +       P +V+ N+++  Y KLG  + +  LF
Sbjct: 251 SVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLF 310

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF--- 178
             M   G  PD  +YN LI+  C    M +A  F ++M   G++P+ +TYS L       
Sbjct: 311 EEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKE 370

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
           H+L Q   A K +  +   G  P+  TYT LI   C+ G + + LKL + ML      NV
Sbjct: 371 HMLQQ---AIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNV 427

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y+ LL  +CK GR+ EA  L   M   G+ P+L TY+ L+ G  K  +V  A++L  E
Sbjct: 428 VTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKE 487

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           +  K+I P+   +G I+ GLC +  + E       +       + V+Y I +D Y K G 
Sbjct: 488 IKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGK 547

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY-T 417
             EA+ L +++ +  +  +IVTF  LI G CK G V +A      +    L+P+ V   T
Sbjct: 548 TVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCT 607

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++  C+   I+    L  EM+ K + P  + YT +I G  K    QEA+ +   M  +
Sbjct: 608 ALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSEL 667

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           G+  D   Y +++    +   +++A   LN+M
Sbjct: 668 GMELDLHAYTSLVWGLSQGNLVQQARMFLNEM 699



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 140/375 (37%), Gaps = 114/375 (30%)

Query: 327 ARMYFDS------LIMSN------------------CIQDVVLYNIMIDGYVKLGNIGEA 362
           ARMYFD+      LI S                   C+    +++ +   +++LG + EA
Sbjct: 142 ARMYFDANFFLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEA 201

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            Q + ++   R+ P   + N+ +Y   K GK                             
Sbjct: 202 GQCFSRMTRFRVFPKARSCNAFLYRLAKTGK----------------------------- 232

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
               G++       ++M    I  +  TY ++I  +CK+  +  A  L   M  +G+TPD
Sbjct: 233 ----GDLSN--KFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPD 286

Query: 483 -----------------------------------QITYNTIIRSFCKCKDLRKAFQLLN 507
                                               ITYN +I  FCK + + KAF  L+
Sbjct: 287 IVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLH 346

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M    L+P   TY+ LID LC    L+ A   L+ ++   +S  +  YT++I A+C  G
Sbjct: 347 EMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAG 406

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
            +  A+    +M++     ++  YT                     +L    + G +   
Sbjct: 407 YLSDALKLADEMLQVQVGFNVVTYT--------------------TLLDGLCKEGRMMEA 446

Query: 628 FELAAVMIKSGLLPD 642
            +L   MIK+G+ P+
Sbjct: 447 EDLFRAMIKAGVTPN 461



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 4/197 (2%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDI----KVSETP 60
            Y +TG   +A+ ++ +M +L ++V+I T+  L+  L    ++ +  D        +  P
Sbjct: 541 AYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQP 600

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            NV   + +IDGLC+ + ++ A     E   K   P  ++  A++    K    + A  +
Sbjct: 601 NNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNI 660

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M + G+  D  +Y  L+ GL     +++A  F N+M   G+ PD I    L + ++ 
Sbjct: 661 RSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYE 720

Query: 181 LSQISGAWKVIQKLLIK 197
           L  I  A ++  +LL K
Sbjct: 721 LGSIDEAIELHDELLKK 737


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 220/417 (52%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +L DAI    +       PS+V  N ++S   KL   +V   L   M   G+  D +++N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           I+I+  C    +  AL     M + G EPD +T   L  GF   +++S A  ++ K++  
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  PDIV Y  +I   C+   V +     + +  +G + NV+ Y+ L++ +C S R  +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             LL +M    + P+++TYS L+    K  KV +A +L+ EM    I P+   + +++ G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC  + I EA   FD ++   C+ DVV YN +I+G+ K   + + ++L+R++ ++ +  +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            VT+N+LI GF + G V  A+     +   G+ P   TY   +   C+ G +++ L + +
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +M+ + +    VTYT VI+G+CK  K++EA  L   + + G+ PD +TY T++   C
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 246/483 (50%), Gaps = 12/483 (2%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  M+K    P    +N L+  +      +  +     M   G+  D  T++I+  
Sbjct: 69  AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F    Q+S A  ++ K+L  G +PD VT   L+ G+C+   V + + L + M+  G+K 
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +++AY+ ++ S+CK+ R+++A     E+E  G++P++VTY+ L+ GLC   +   A +L 
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           ++M  K+I+PN   + A+L    +   + EA+  F+ ++  +   D+V Y+ +I+G    
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             I EA Q++  ++ K     +V++N+LI GFCK  +V D  +L   +   GL  + VTY
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T +  + + G++ +      +M+   I P   TY +++ GLC   +L++A+ + EDM  
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             +  D +TY T+IR  CK   + +A+ L   + L  L+P   TY  ++ GLC  G L  
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHC--AEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
            + L           TK+    ++K  C  ++GD+  +     +M+  G+  S+    KS
Sbjct: 489 VEAL----------YTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKS 538

Query: 595 FFC 597
             C
Sbjct: 539 GVC 541



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 229/465 (49%), Gaps = 7/465 (1%)

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           + +A++  +DM +    P  + ++ L      L +      + +K+ + G   D+ T+ +
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           +I  +C    V   L +   ML  G++ + +    L++  C+  R+ +A+ L+ +M  +G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
            KPD+V Y+ +I  LCK  +V+ A   + E+  K I PN   + A++ GLC     ++A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
                +I      +V+ Y+ ++D +VK G + EA +L+ +++   I P IVT++SLI G 
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C + ++ +A ++ D +   G     V+Y T +N +C+   ++  + L +EM  + +    
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VTY  +I+G  +   + +A +    M   G++PD  TYN ++   C   +L KA  +   
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    ++    TY  +I G+C  G ++ A  L  SL    +    V YTT++   C +G 
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485

Query: 569 VHKAMTFFCQMVEKGF-----EISIRDYTKS--FFCMMLSNGFPP 606
           +H+    + +M ++G       +S  D T S      MLS G+ P
Sbjct: 486 LHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAP 530



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 220/442 (49%), Gaps = 20/442 (4%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P IV +  L+    ++   +  + L + M   G + ++  ++++++  C   ++  AL +
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L +M  +G +PD VT   L+ G C++++V  A+ L ++M      P+  A+ AI+  LC+
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
            + + +A  +F  +       +VV Y  +++G        +A +L   +I+K+I+P+++T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +++L+  F KNGKV +A+ L + +    ++P  VTY++ +N  C    I     +   M 
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
           +K      V+Y  +I G CK  ++++ ++L  +M   G+  + +TYNT+I+ F +  D+ 
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           KA +  +QM    + P   TYNIL+ GLC NG+L+ A  +   +Q+  + L  V YTT+I
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
           +  C  G V +A + FC +                       G  PD      M+     
Sbjct: 443 RGMCKTGKVEEAWSLFCSLS--------------------LKGLKPDIVTYTTMMSGLCT 482

Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
            G L  V  L   M + GL+ +
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKN 504



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 231/444 (52%), Gaps = 3/444 (0%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           ++DA+ + + M +     SI  +N LL     L+  D++  L   ++V     ++YT +I
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           VI+  C   ++  A+  L +     + P  V++ ++++ +C+      A  L   M++ G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  +YN +I  LC    + +A +F  ++ R G+ P+ +TY+ L  G    S+ S A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +++  ++ K   P+++TY+ L+  + + G V E  +L E M+      +++ YS L++ +
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C   RIDEA  +   M + G   D+V+Y+ LI G CK  +V   ++L+ EM  + +  N+
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  ++ G  +   + +A+ +F  +       D+  YNI++ G    G + +A+ ++  
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + ++ +   IVT+ ++I G CK GKV +A  L  ++ L GL+P  VTYTT M+  C +G 
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485

Query: 429 IQRLLALLQEMETKAIGPTHVTYT 452
           +  + AL  +M+ + +     T +
Sbjct: 486 LHEVEALYTKMKQEGLMKNDCTLS 509



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 202/390 (51%), Gaps = 13/390 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + R   V DAV ++ KM E+  K  I  YN+++ +L   +  +  +D + +I+      N
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +++GLC  SR  DA   L +   K+  P+V++ +A++  + K G    AK LF 
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M++  + PD  +Y+ LI+GLC+   ++EA +  + M   G   D ++Y+ L  GF    
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++    K+ +++  +G   + VTY  LI G+ Q G+V++  +    M   G   ++  Y+
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +LL  +C +G +++AL +  +M+   +  D+VTY+ +IRG+CK  KV +A  L+  +  K
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   +  ++ GLC K ++ E    +  +     +++        D  +  G+I  +
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLS 516

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +L ++++    +PS++    +  G CK  
Sbjct: 517 AELIKKMLSCGYAPSLL--KDIKSGVCKKA 544



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 169/363 (46%), Gaps = 26/363 (7%)

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAIL---LGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K++ AI L+++M   R  P+      +L   + L + +++       + L + N   D+ 
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN---DLY 121

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            +NI+I+ +     +  A+ +  ++++    P  VT  SL+ GFC+  +V+DA  L+D +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G +P  V Y   +++ C+   +       +E+E K I P  VTYT ++ GLC   + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            +A +LL DM    +TP+ ITY+ ++ +F K   + +A +L  +M   +++P   TY+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           I+GLC++  +  A+ +   +         V+Y T+I   C    V   M  F +M ++G 
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
             +   Y                      ++  F Q GD+    E  + M   G+ PD +
Sbjct: 362 VSNTVTYN--------------------TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401

Query: 645 LIN 647
             N
Sbjct: 402 TYN 404


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 143/466 (30%), Positives = 239/466 (51%), Gaps = 3/466 (0%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           S +  + ++  YC+L   + A   F LM + G  P   + N ++  L     +E A  F 
Sbjct: 155 STILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFY 214

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
            DM R  ++ +  T++I+        ++  A   +  +   G  P IVTY  L+ GY   
Sbjct: 215 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLR 274

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G +E    +   M S+GF+ ++  Y+ +LS MC  GR  E   +L EM+ +GL PD V+Y
Sbjct: 275 GRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASE---VLREMKGIGLVPDSVSY 331

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +ILIRG      +  A    +EM  + + P  + +  ++ GL  +  I  A +    +  
Sbjct: 332 NILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 391

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
              + D V YNI+I+GY + G+  +A  L+ +++   I P+  T+ SLIY  C+  K  +
Sbjct: 392 KGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTRE 451

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  L + +   G++P  V   T M+ +C  GN+ R  +LL+EM+   I P  VTY  +++
Sbjct: 452 ADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMR 511

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLC + K +EA +L+ +M   G+ PD I+YNT+I  + K  D + AF + ++M      P
Sbjct: 512 GLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNP 571

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
           T  TYN L+ GL  N D + A+ LL  ++   I     ++ ++I+A
Sbjct: 572 TLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEA 617



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 219/426 (51%), Gaps = 3/426 (0%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           L + +R+++A +F  +    E   +V + N +++  CK G  + AKG   +M  +G+ P 
Sbjct: 201 LSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPT 260

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
             +YN L+ G  + G +E A    ++M   G +PD  TY+ +      +     A +V++
Sbjct: 261 IVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPI---LSWMCNEGRASEVLR 317

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           ++   G  PD V+Y +LI G    G++E     R+ M+ QG       Y+ L+  +    
Sbjct: 318 EMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 377

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           +I+ A  L+ E+   G+  D VTY+I+I G C+     KA  L++EM +  I P  F + 
Sbjct: 378 KIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYT 437

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           +++  LC +    EA   F+ ++      D+V+ N ++DG+   GN+  A  L +++   
Sbjct: 438 SLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRM 497

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            I P  VT+N L+ G C  GK  +AR L+  +K  G++P  ++Y T ++ Y ++G+ +  
Sbjct: 498 NIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 557

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             +  EM +    PT +TY  ++KGL K    + A +LL +M   G+ P+  ++ ++I +
Sbjct: 558 FIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEA 617

Query: 493 FCKCKD 498
             K  +
Sbjct: 618 MSKSDN 623



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 202/395 (51%), Gaps = 3/395 (0%)

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           KG DP   T   ++    ++  +E        M     K NV  ++++++ +CK G++ +
Sbjct: 185 KGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKK 244

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A G L  ME+ G+KP +VTY+ L++G   + ++  A  + +EM SK   P+   +  IL 
Sbjct: 245 AKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILS 304

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
            +C +   +E       +     + D V YNI+I G    G++  A     +++++ + P
Sbjct: 305 WMCNEGRASEVLREMKGI---GLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVP 361

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           +  T+N+LI+G     K+  A  L+  I+  G+   +VTY   +N YC+ G+ ++  AL 
Sbjct: 362 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALH 421

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
            EM T  I PT  TYT +I  LC++ K +EA +L E +   G+ PD +  NT++   C  
Sbjct: 422 DEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAT 481

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
            ++ +AF LL +M   N++P   TYN L+ GLC  G  + A  L+  ++   I    ++Y
Sbjct: 482 GNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 541

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
            T+I  +  +GD   A     +M+  GF  ++  Y
Sbjct: 542 NTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTY 576



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 213/462 (46%), Gaps = 43/462 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRN 62
           Y +  MV +A+     MKE       +T N   SLL  L   +  W  Y D+   E   N
Sbjct: 166 YCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSN 225

Query: 63  VYTNSIVIDGLCQQSRLQDAILFL-----------------------------------Q 87
           VYT +I+I+ LC++ +L+ A  FL                                    
Sbjct: 226 VYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIIS 285

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFA-EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           E   K F P + + N I+S  C  G A EV +     M   GL PD+ SYNILI G    
Sbjct: 286 EMKSKGFQPDLQTYNPILSWMCNEGRASEVLRE----MKGIGLVPDSVSYNILIRGCSNN 341

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G +E A  + ++M + G+ P   TY+ L  G  + ++I  A  +I+++  KG   D VTY
Sbjct: 342 GDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 401

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            ++I GYCQ G+ ++   L + M++ G K     Y+ L+  +C+  +  EA  L  ++  
Sbjct: 402 NIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVG 461

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G+KPDLV  + L+ G C    + +A  L  EM    I P+   +  ++ GLC +    E
Sbjct: 462 KGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEE 521

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           AR     +       D + YN +I GY K G+   A  +  +++    +P+++T+N+L+ 
Sbjct: 522 ARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLK 581

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           G  KN     A  LL  +K  G+ P+  ++ + + A  +  N
Sbjct: 582 GLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKSDN 623



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 139/308 (45%), Gaps = 18/308 (5%)

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           +L  I  A   Y  +    I  ++ TFN +I   CK GK+  A+  L  ++  G++P+ V
Sbjct: 203 RLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIV 262

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TY T +  Y   G I+    ++ EM++K   P   TY  ++  +C + +   A ++L +M
Sbjct: 263 TYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREM 319

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
             IG+ PD ++YN +IR      DL  AF   ++M    + PT  TYN LI GL +   +
Sbjct: 320 KGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI 379

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK- 593
           + A+ L+  ++E  I L  V Y  +I  +C  GD  KA     +M+  G + +   YT  
Sbjct: 380 EAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSL 439

Query: 594 --------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                           F  ++  G  PD  +   ++      G++   F L   M +  +
Sbjct: 440 IYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNI 499

Query: 640 LPDKFLIN 647
            PD    N
Sbjct: 500 DPDDVTYN 507



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 92/236 (38%), Gaps = 23/236 (9%)

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           S + +   +  YC+   +   +     M+ K   P   T   ++  L +  +++ A    
Sbjct: 155 STILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFY 214

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            DMY + +  +  T+N +I   CK   L+KA   L  M    ++PT  TYN L+ G  + 
Sbjct: 215 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLR 274

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           G ++ A  ++  ++          Y  I+   C EG   +A     +M  KG        
Sbjct: 275 GRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEG---RASEVLREM--KGI------- 322

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                      G  PD     +++      GDL + F     M+K G++P  +  N
Sbjct: 323 -----------GLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYN 367


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 148/559 (26%), Positives = 253/559 (45%), Gaps = 77/559 (13%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQD-AILFLQETAGKEFGPSVVSLNAIMSRYC--------- 109
           P +  T ++V+ GL   ++L+    L L E   +   P  V LN I++  C         
Sbjct: 7   PSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAM 66

Query: 110 -------------------------KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
                                    K    + A GL   M   G++P    +N++I GLC
Sbjct: 67  ALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLC 126

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
            AG +  AL     M      PD +TY+ L  G     ++  A +V+Q+++     PD  
Sbjct: 127 RAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNT 185

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY-E 263
           T TV++   C    V++  +L E ML +G   N I YS L+  +CK  R+DEA+ LL  E
Sbjct: 186 TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGE 245

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           +   G  PD+VTYS +I GLCK  ++  A+ ++ EM     +P +  + +++ G C    
Sbjct: 246 VTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGD 302

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           + EA      ++  NC  DV+ Y  ++  + K+G + +A +L++Q++  ++SP +VTF S
Sbjct: 303 MDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 362

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L+ G C  G++ DA  LL+ I   G  P+  TY   ++ YC+   +++   L+ +  ++ 
Sbjct: 363 LVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRG 422

Query: 444 IGPTHVTY-------------------------------------TVVIKGLCKQWKLQE 466
             P  VTY                                      +++  LC+  +  +
Sbjct: 423 FVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDD 482

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           AVQ  E+M   G  P   T+ T++ + CK    ++A +LL +M  +   P   T + ++ 
Sbjct: 483 AVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVS 542

Query: 527 GLCVNGDLKNADCLLVSLQ 545
             C  G ++ AD L   L+
Sbjct: 543 AYCRAGMIQKADELASELR 561



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 217/440 (49%), Gaps = 12/440 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
           R G +  A+ V  +M +        TY  L++ L    R  D +  L + +     P N 
Sbjct: 127 RAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNT 185

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL-GFAEVAKGLFC 122
            T ++V+  LC   R+ DA   ++E   +    + ++ +A++   CK     E    L  
Sbjct: 186 -TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLG 244

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            + + G  PD  +Y+ +I GLC AG + +A++   +M      P AITY+ L  G+    
Sbjct: 245 EVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAG 301

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A +++ K++     PD++TYT L+  +C++G +++  +L + M++     +V+ ++
Sbjct: 302 DMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFT 361

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +C  GR+++AL LL E+   G  P + TY+ ++ G CK ++V KA +L  +  S+
Sbjct: 362 SLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSR 421

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN--CIQDVVLYNIMIDGYVKLGNIG 360
              PN+  +  ++ G C      +A  Y D L      C   V +Y I++D   + G   
Sbjct: 422 GFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTD 481

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +AVQ Y ++I++   P+  TF ++++  CK  +   A  LL+ +  +G  P   T    +
Sbjct: 482 DAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVV 541

Query: 421 NAYCEEGNIQRLLALLQEME 440
           +AYC  G IQ+   L  E+ 
Sbjct: 542 SAYCRAGMIQKADELASELR 561



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 186/400 (46%), Gaps = 42/400 (10%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALG--LLYEMEAVGLKPDLV------------ 274
           ML  G+  +   ++V+L  +  S ++   LG  LL E+   GL PD V            
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKL-RHLGPLLLDEIRDRGLSPDPVELNTILAELCDA 59

Query: 275 ----------------------TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
                                 TY  LI  LCK   + +A+ L  +M S+ ++P +  H 
Sbjct: 60  RDTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++ GLC    +  A   +  +  ++   D + Y  ++ G  K G + +AVQ+ ++++  
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
           R  P   T   ++   C   +V DAR L++ +   G+  +A+TY+  ++  C+   +   
Sbjct: 179 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEA 238

Query: 433 LA-LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
           +A LL E+  +   P  VTY+ VI GLCK  +L++AV + E+M      P  ITYN++I 
Sbjct: 239 VALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIG 295

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            +C+  D+ +A +LL +M   N  P   TY  L+   C  G L +A  L   +  + +S 
Sbjct: 296 GYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSP 355

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
             V +T+++   C EG +  A+    ++  +G   +I  Y
Sbjct: 356 DVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTY 395



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 155/312 (49%), Gaps = 11/312 (3%)

Query: 31  IQTYNSLLYNLRHTDIMWDLYDDIK-VSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           I TY++++  L     + D  D  + +S  P  +  NS+ I G C+   + +AI  L + 
Sbjct: 255 IVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSL-IGGYCRAGDMDEAIRLLGKM 313

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                 P V++   +MS +CK+G  + A  LF  M+   L PD  ++  L+ GLC  G M
Sbjct: 314 VDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 373

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           E+ALE   ++ R G  P   TY+ +  G+   +Q+  A +++     +G  P+ VTY +L
Sbjct: 374 EDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNIL 433

Query: 210 ICGYCQIGNVEEGLKLREVMLSQG--FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           + G C+ G  ++ L+  + + S+G     +V  Y+++L ++C+ GR D+A+    EM   
Sbjct: 434 VAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQR 493

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI--- 324
           G  P   T++ ++  LCK  +  +A +L  EM     +P      A++   C   MI   
Sbjct: 494 GYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 553

Query: 325 ----TEARMYFD 332
               +E R+Y D
Sbjct: 554 DELASELRLYTD 565



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 40/363 (11%)

Query: 267 VGLKPDLVTYSILIRGLCKQDKV-HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
            G   D  T+++++RGL    K+ H    L +E+  + +SP+      IL  LC+    T
Sbjct: 4   AGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTT 63

Query: 326 EARMYFD--------------SLIMSNCIQDV--------------------VLYNIMID 351
            A   FD              +LI   C   +                    +L+N++I 
Sbjct: 64  TAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIG 123

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G  + G +  A+ +YRQ+ +    P  +T+  L++G  K G++ DA ++L  +      P
Sbjct: 124 GLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVP 182

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ-L 470
              T T  + + C    +     L++EM  + +    +TY+ ++ GLCK  +L EAV  L
Sbjct: 183 DNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALL 242

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L ++   G TPD +TY+T+I   CK   LR A  +  +M   +  PT+ TYN LI G C 
Sbjct: 243 LGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCR 299

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            GD+  A  LL  + + N +   + YTT++ A C  G +  A   F QMV       +  
Sbjct: 300 AGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVT 359

Query: 591 YTK 593
           +T 
Sbjct: 360 FTS 362



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 135/298 (45%), Gaps = 38/298 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           Y R G + +A+ ++ KM + +    + TY +L+     +   D  ++L+  +  ++   +
Sbjct: 297 YCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPD 356

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + ++DGLC + R++DA+  L+E   +   P++ + N ++  YCK      A+ L  
Sbjct: 357 VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVA 416

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
                G  P+  +YNIL+ G C AG  ++AL++ + +   G                   
Sbjct: 417 DFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG------------------- 457

Query: 183 QISGAWKVIQKLLIKGSDP-DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
                          G  P  +  Y +++   C+ G  ++ ++  E M+ +G+      +
Sbjct: 458 ---------------GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 502

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           + ++ ++CK+ +  +A  LL EM   G  P   T   ++   C+   + KA +L +E+
Sbjct: 503 ATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 253/524 (48%), Gaps = 40/524 (7%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  P   SYN +I GL     M+EA +F N M  +G EPD I ++ L  GF    Q    
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            K++ + L K   PD+  YT +I GYC+ G+++ G   R V  +    L+VI+Y+ ++  
Sbjct: 62  HKLLNQAL-KRFRPDVFLYTSVIHGYCKAGDLDTGY-FRAV--TPKASLDVISYTTVIKG 117

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +  S RIDEA  L  E++  G  P++V Y+ +I GL K  ++   ++ + EM      P 
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  ++ GLC+ +M+ +A   F+ ++   C+ D + Y  +IDG+ K   + EA +L  
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            ++ K   P+ VT+ S+++GFCK   + +A+ ++  ++  G EP    +T+ ++ Y  +G
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKG 297

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
             +    +L EM  +   P  + YT +I  L    ++ EA  + + M   G  PD +TY 
Sbjct: 298 RAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYG 357

Query: 488 TIIRSFCKCKDLR-----------------------------------KAFQLLNQMWLH 512
           TII++F K  ++                                    +AF + ++M   
Sbjct: 358 TIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVAS 417

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVS-LQEHNISLTKVAYTTIIKAHCAEGDVHK 571
            ++P + T+N+L+ GL  +G    A  L    L++  +  T V+YT +I      G V +
Sbjct: 418 GIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSE 477

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
           A   F +M+++G       YT   + +  +   P  +++ E M+
Sbjct: 478 AFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV 521



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 151/590 (25%), Positives = 275/590 (46%), Gaps = 40/590 (6%)

Query: 30  SIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           +I +YN+++  L   D M   +  ++ +  +    +V   + +I G C+  + Q     L
Sbjct: 6   TIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLL 65

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLG--------------------FAEVAKGL------ 120
            + A K F P V    +++  YCK G                    +  V KGL      
Sbjct: 66  NQ-ALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRI 124

Query: 121 ------FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
                 F  +   G  P+  +Y  +I GL  AG +E+ L+   +M      P   TY+++
Sbjct: 125 DEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVV 184

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G      +  A KV ++++ KG  PD +TYT LI G+ +   ++E  KL +VML++G 
Sbjct: 185 IDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGP 244

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           +   + Y  ++   CK   I+EA  ++ +M   G +P L  ++ L+     + +  +A Q
Sbjct: 245 EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQ 304

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           +  EM ++  +P+   + +++  L     + EAR  FDS+I   C  D + Y  +I  + 
Sbjct: 305 VLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFS 364

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K+GN+  A ++   + +  + P    +NSL+ G+ K  +V  A  + D +   G++P+AV
Sbjct: 365 KIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAV 424

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           T+   M+   ++G   R  +L +EM E + + PT V+YT++I GL K  ++ EA    ++
Sbjct: 425 TFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQE 484

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G+ P+  TY ++I S  K   + +A +L+  M    + P    Y+ LI GL  +  
Sbjct: 485 MIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSM 544

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG---DVHKAMTFFCQMV 580
           +  A  +   + +   +  +V Y  + +   A G   D+      F Q V
Sbjct: 545 VDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGV 594



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 238/490 (48%), Gaps = 3/490 (0%)

Query: 6   YSRTGMVHDAVF-VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
           Y + G +    F  +     LD+ +S  T    L + +  D   +L++++K +    NV 
Sbjct: 86  YCKAGDLDTGYFRAVTPKASLDV-ISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVV 144

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             + VIDGL +  R++D +   +E +G    P+  +   ++   CK      A  +F  M
Sbjct: 145 AYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQM 204

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G  PD  +Y  LI G   A  M+EA +  + M   G EP A+TY  +  GF  L  I
Sbjct: 205 VQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMI 264

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A +VI ++  +G +P +  +T L+  Y   G  EE  ++   M ++G   +VI Y+ L
Sbjct: 265 NEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSL 324

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +  +GR+ EA  +   M   G  PD +TY  +I+   K   V  A ++   M    +
Sbjct: 325 IDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGV 384

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+ FA+ +++ G  + E + +A   +D ++ S    + V +N+++ G  K G    A  
Sbjct: 385 GPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFS 444

Query: 365 LYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           L+++++EK  + P++V++  LI G  K G+V++A      +   G+ P   TYT+ + + 
Sbjct: 445 LFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSL 504

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            + G I     L+++M    + P    Y+ +I GL     +  A  + ++M   G  P++
Sbjct: 505 AKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNE 564

Query: 484 ITYNTIIRSF 493
           +TY  + R F
Sbjct: 565 VTYKVLRRGF 574



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 183/396 (46%), Gaps = 19/396 (4%)

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           +G +P +V+Y+ +I GL   DK+ +A + +N M      P+  A   ++ G C+      
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
                +   +     DV LY  +I GY K G++      Y + +  + S  ++++ ++I 
Sbjct: 61  GHKLLNQ-ALKRFRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIK 116

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G   + ++ +A  L + +K  G  P+ V YT  ++   + G I+  L   +EM   +  P
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP 176

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
           T  TYTVVI GLCK   L +A ++ E M   G  PD ITY T+I  F K   + +A +LL
Sbjct: 177 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           + M     EPT+ TY  ++ G C    +  A  ++  ++E         +T+++  + ++
Sbjct: 237 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 296

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEIC 611
           G   +A     +M  +G    +  YT               +  F  M+  G  PD    
Sbjct: 297 GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTY 356

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             ++  F + G++ +  E+  +M KSG+ PD F  N
Sbjct: 357 GTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYN 392



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/404 (25%), Positives = 186/404 (46%), Gaps = 8/404 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYD--DIKVSETPR-NVY 64
           +  M+ DA  V  +M +        TY +L+        M +     D+ +++ P     
Sbjct: 190 KAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAV 249

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T   ++ G C+   + +A   + +   +   P +    +++S Y   G AE A  +   M
Sbjct: 250 TYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM 309

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G  PD   Y  LI  L   G + EA    + M   G  PDA+TY  + + F  +  +
Sbjct: 310 TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNV 369

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++++ +   G  PD   Y  L+ GY ++  V++   + + M++ G K N + ++VL
Sbjct: 370 EAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVL 429

Query: 245 LSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +  + K G+ D A  L  EM E   + P LV+Y+ILI GL K  +V +A   + EM  + 
Sbjct: 430 MHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRG 489

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I P    + +++  L +   I EA+   + ++      DV  Y+ +I G +    +  A 
Sbjct: 490 IIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAW 549

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            ++++++++  +P+ VT+  L  GF   G+  D    L+ +K H
Sbjct: 550 DVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD----LEAVKQH 589


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 241/491 (49%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           + DA+         +  PSV+  N I+    K+    VA  L   M+  G+ P  F+ +I
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
            I+  C  G M  A      + + G +P+ IT + + KG  +  ++  A      +  +G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
              D V Y  LI G C+IG   +  +L + M  Q  K N++ Y++++ S CK     +A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L  ++  +G+ PD++TY+ LIRG C+  +  +  QL  EM +K I+PN +    ++   
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C K  + EA+  F+ ++      D+V +N +I G+   GN+ EA +L+  + E+ I P +
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            ++  LI G+CK  ++ +A  L + ++   +    V Y++ ++  C+ G I     L   
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 424

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           +      P  +TY ++I   CK   +   ++L + M   G+TP  +TYN +I  +CK K 
Sbjct: 425 INNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKR 484

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           +R+A  LL+ M   NL P S TYN L DGLC +G + +A  L   +      +    Y  
Sbjct: 485 IREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNV 544

Query: 559 IIKAHCAEGDV 569
           ++ A C   DV
Sbjct: 545 LLDAFCKAQDV 555



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 230/462 (49%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P    +N +I  +        A+     M   GV P   T SI    +  L ++  A+ V
Sbjct: 82  PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           +  +L +G  P+ +T T ++ G C  G V++ +   + + +QG  L+ + Y  L++ +CK
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            GR  +A  LL EME   +KP++V Y+++I   CK +   KA  LY ++    I P+   
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 261

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + +++ G C      E +     ++  N   +V  +N++ID + + G + EA  ++  ++
Sbjct: 262 YTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 321

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           ++   P IVTFN+LI G C +G V +AR+L DT+   G+ P   +YT  +  YC+   I 
Sbjct: 322 KRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRID 381

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             ++L  EM  K +    V Y+ +I GLCK  ++  A +L   +   G  P+ ITYN +I
Sbjct: 382 EAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILI 441

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
            +FCK +D+    +L   M    L PT  TYNILI+G C +  ++ A  LL  +Q  N++
Sbjct: 442 DAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLA 501

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
              + Y ++    C  G +  A   F  M   G  + +  Y 
Sbjct: 502 PDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYN 543



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 250/481 (51%), Gaps = 1/481 (0%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           I +   P  +  N+I I  + +      AI  L++   K   PS+ +L+  ++ YC LG 
Sbjct: 76  INMQPLPSVIQFNTI-IGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGE 134

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A  +  ++LK G  P+  +   ++ GLCI G +++A++F +++   G+  D + Y  
Sbjct: 135 MGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGT 194

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L  G   + +   A++++Q++  +   P+IV Y ++I  +C+     +   L   ++  G
Sbjct: 195 LINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMG 254

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              +++ Y+ L+   C++G+  E   L+ EM    + P++ T+++LI   C++ K+ +A 
Sbjct: 255 IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQ 314

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            ++N M  +   P+      ++ G C    + EAR  FD++     + DV  Y I+I GY
Sbjct: 315 GMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGY 374

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K   I EAV L+ ++  K +   IV ++SLI G CK+G+++ A  L  TI   G  P+ 
Sbjct: 375 CKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNV 434

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           +TY   ++A+C+  +I   + L + M  K + PT +TY ++I G CK  +++EA+ LL  
Sbjct: 435 ITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSV 494

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M    + PD ITYN++    CK   +  A++L   M +       ATYN+L+D  C   D
Sbjct: 495 MQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQD 554

Query: 534 L 534
           +
Sbjct: 555 V 555



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 252/500 (50%), Gaps = 3/500 (0%)

Query: 3   AFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSET 59
           A + S    + DAV +   +  +    S+  +N+++     ++H  +   L   +     
Sbjct: 56  AKILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGV 115

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             +++T SI I+  C    +  A   L     + + P+ ++L  +M   C  G  + A  
Sbjct: 116 TPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMD 175

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
               +   G+  D   Y  LI+GLC  G   +A +   +M    V+P+ + Y+++   F 
Sbjct: 176 FHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFC 235

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
                  A  +  K++  G DPDI+TYT LI G+C+ G   E  +L   M+++    NV 
Sbjct: 236 KDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVY 295

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            ++VL+ + C+ G++ EA G+   M   G +PD+VT++ LI G C    V +A +L++ +
Sbjct: 296 TFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTV 355

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             + I P+ +++  +++G C+ + I EA   F+ +   N + D+VLY+ +IDG  K G I
Sbjct: 356 FERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRI 415

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A +L+  +      P+++T+N LI  FCK   +     L   +   GL P+ +TY   
Sbjct: 416 SYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNIL 475

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N YC+   I+  + LL  M++K + P  +TY  +  GLCK  ++ +A +L + M+V G 
Sbjct: 476 INGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGP 535

Query: 480 TPDQITYNTIIRSFCKCKDL 499
             D  TYN ++ +FCK +D+
Sbjct: 536 PVDVATYNVLLDAFCKAQDV 555



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 227/492 (46%), Gaps = 15/492 (3%)

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +++A+   N +      P  I ++ +      +     A  ++++++ KG  P I T ++
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
            I  YC +G +     +  ++L +G++ N I  + ++  +C +G + +A+     + A G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           +  D V Y  LI GLCK  +   A QL  EM  + + PN   +  I+   C+ E+  +AR
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             +  ++      D++ Y  +I G+ + G  GE  QL  +++ K I+P++ TFN LI  F
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C+ GK+ +A+ + + +   G +P  VT+ T ++ +C  GN+     L   +  + I P  
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
            +YT++I G CK  ++ EAV L  +M    +  D + Y+++I   CK   +  A++L + 
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 424

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           +      P   TYNILID  C   D+     L   +    ++ T + Y  +I  +C    
Sbjct: 425 INNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKR 484

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSF---------------FCMMLSNGFPPDQEICEV 613
           + +AM     M  K        Y   F               F +M   G P D     V
Sbjct: 485 IREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNV 544

Query: 614 MLIAFHQGGDLG 625
           +L AF +  D+ 
Sbjct: 545 LLDAFCKAQDVA 556



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 177/382 (46%), Gaps = 35/382 (9%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           D +D++       +      +I+GLC+  R  DA   LQE  G+   P++V  N I+  +
Sbjct: 175 DFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSF 234

Query: 109 CK------------------------------LGFAEVA-----KGLFCLMLKYGLHPDA 133
           CK                               GF         K L C M+   ++P+ 
Sbjct: 235 CKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNV 294

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
           +++N+LI   C  G M EA    N M + G +PD +T++ L  G  L   +  A K+   
Sbjct: 295 YTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDT 354

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +  +G  PD+ +YT+LI GYC+   ++E + L   M  +   L+++ YS L+  +CKSGR
Sbjct: 355 VFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGR 414

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           I  A  L   +   G  P+++TY+ILI   CK   +   I+L+  MC K ++P    +  
Sbjct: 415 ISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNI 474

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++ G C+ + I EA      +   N   D + YN + DG  K G I +A +L++ +    
Sbjct: 475 LINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGG 534

Query: 374 ISPSIVTFNSLIYGFCKNGKVA 395
               + T+N L+  FCK   VA
Sbjct: 535 PPVDVATYNVLLDAFCKAQDVA 556



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 145/319 (45%), Gaps = 20/319 (6%)

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           I +A   F+ LI    +  V+ +N +I   VK+ +   A+ L +Q++ K ++PSI T + 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
            I  +C  G++  A  +L  +   G +P+ +T TT M   C  G +Q+ +     +  + 
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           +    V Y  +I GLCK  +  +A QLL++M    V P+ + YN II SFCK +   KA 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L  ++    ++P   TY  LI G C  G       L+  +   NI+     +  +I A 
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           C +G + +A   F  MV++G +                    PD      ++      G+
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQ--------------------PDIVTFNTLISGHCLHGN 344

Query: 624 LGSVFELAAVMIKSGLLPD 642
           +    +L   + + G+LPD
Sbjct: 345 VLEARKLFDTVFERGILPD 363



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 20/289 (6%)

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I +AV L+  LI  +  PS++ FN++I    K      A  LL  +   G+ PS  T + 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
           ++N YC  G +    ++L  +  +   P ++T T V+KGLC   ++Q+A+   +++   G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           +  D++ Y T+I   CK      AFQLL +M    ++P    YN++ID  C +     A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            L + + +  I    + YT++I+  C  G   +     C+MV K                
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNIN------------- 291

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                  P+     V++ AF + G +     +  +M+K G  PD    N
Sbjct: 292 -------PNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFN 333


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 220/417 (52%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +L DAI    +       PS+V  N ++S   KL   +V   L   M   G+  D +++N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           I+I+  C    +  AL     M + G EPD +T   L  GF   +++S A  ++ K++  
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  PDIV Y  +I   C+   V +     + +  +G + NV+ Y+ L++ +C S R  +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             LL +M    + P+++TYS L+    K  KV +A +L+ EM    I P+   + +++ G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC  + I EA   FD ++   C+ DVV YN +I+G+ K   + + ++L+R++ ++ +  +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            VT+N+LI GF + G V  A+     +   G+ P   TY   +   C+ G +++ L + +
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +M+ + +    VTYT VI+G+CK  K++EA  L   + + G+ PD +TY T++   C
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 246/483 (50%), Gaps = 12/483 (2%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  M+K    P    +N L+  +      +  +     M   G+  D  T++I+  
Sbjct: 69  AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F    Q+S A  ++ K+L  G +PD VT   L+ G+C+   V + + L + M+  G+K 
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +++AY+ ++ S+CK+ R+++A     E+E  G++P++VTY+ L+ GLC   +   A +L 
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           ++M  K+I+PN   + A+L    +   + EA+  F+ ++  +   D+V Y+ +++G    
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLH 308

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             I EA Q++  ++ K     +V++N+LI GFCK  +V D  +L   +   GL  + VTY
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T +  + + G++ +      +M+   I P   TY +++ GLC   +L++A+ + EDM  
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             +  D +TY T+IR  CK   + +A+ L   + L  L+P   TY  ++ GLC  G L  
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHC--AEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
            + L           TK+    ++K  C  ++GD+  +     +M+  G+  S+    KS
Sbjct: 489 VEAL----------YTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKS 538

Query: 595 FFC 597
             C
Sbjct: 539 GVC 541



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 229/465 (49%), Gaps = 7/465 (1%)

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           + +A++  +DM +    P  + ++ L      L +      + +K+ + G   D+ T+ +
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           +I  +C    V   L +   ML  G++ + +    L++  C+  R+ +A+ L+ +M  +G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
            KPD+V Y+ +I  LCK  +V+ A   + E+  K I PN   + A++ GLC     ++A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
                +I      +V+ Y+ ++D +VK G + EA +L+ +++   I P IVT++SL+ G 
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C + ++ +A ++ D +   G     V+Y T +N +C+   ++  + L +EM  + +    
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VTY  +I+G  +   + +A +    M   G++PD  TYN ++   C   +L KA  +   
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    ++    TY  +I G+C  G ++ A  L  SL    +    V YTT++   C +G 
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485

Query: 569 VHKAMTFFCQMVEKGF-----EISIRDYTKS--FFCMMLSNGFPP 606
           +H+    + +M ++G       +S  D T S      MLS G+ P
Sbjct: 486 LHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAP 530



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 220/442 (49%), Gaps = 20/442 (4%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P IV +  L+    ++   +  + L + M   G + ++  ++++++  C   ++  AL +
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L +M  +G +PD VT   L+ G C++++V  A+ L ++M      P+  A+ AI+  LC+
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
            + + +A  +F  +       +VV Y  +++G        +A +L   +I+K+I+P+++T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +++L+  F KNGKV +A+ L + +    ++P  VTY++ +N  C    I     +   M 
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV 322

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
           +K      V+Y  +I G CK  ++++ ++L  +M   G+  + +TYNT+I+ F +  D+ 
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           KA +  +QM    + P   TYNIL+ GLC NG+L+ A  +   +Q+  + L  V YTT+I
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
           +  C  G V +A + FC +                       G  PD      M+     
Sbjct: 443 RGMCKTGKVEEAWSLFCSLS--------------------LKGLKPDIVTYTTMMSGLCT 482

Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
            G L  V  L   M + GL+ +
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKN 504



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 231/444 (52%), Gaps = 3/444 (0%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           ++DA+ + + M +     SI  +N LL     L+  D++  L   ++V     ++YT +I
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           VI+  C   ++  A+  L +     + P  V++ ++++ +C+      A  L   M++ G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  +YN +I  LC    + +A +F  ++ R G+ P+ +TY+ L  G    S+ S A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +++  ++ K   P+++TY+ L+  + + G V E  +L E M+      +++ YS L++ +
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C   RIDEA  +   M + G   D+V+Y+ LI G CK  +V   ++L+ EM  + +  N+
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  ++ G  +   + +A+ +F  +       D+  YNI++ G    G + +A+ ++  
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + ++ +   IVT+ ++I G CK GKV +A  L  ++ L GL+P  VTYTT M+  C +G 
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485

Query: 429 IQRLLALLQEMETKAIGPTHVTYT 452
           +  + AL  +M+ + +     T +
Sbjct: 486 LHEVEALYTKMKQEGLMKNDCTLS 509



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 202/390 (51%), Gaps = 13/390 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + R   V DAV ++ KM E+  K  I  YN+++ +L   +  +  +D + +I+      N
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +++GLC  SR  DA   L +   K+  P+V++ +A++  + K G    AK LF 
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M++  + PD  +Y+ L++GLC+   ++EA +  + M   G   D ++Y+ L  GF    
Sbjct: 285 EMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++    K+ +++  +G   + VTY  LI G+ Q G+V++  +    M   G   ++  Y+
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +LL  +C +G +++AL +  +M+   +  D+VTY+ +IRG+CK  KV +A  L+  +  K
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   +  ++ GLC K ++ E    +  +     +++        D  +  G+I  +
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLS 516

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +L ++++    +PS++    +  G CK  
Sbjct: 517 AELIKKMLSCGYAPSLL--KDIKSGVCKKA 544



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 169/363 (46%), Gaps = 26/363 (7%)

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAIL---LGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K++ AI L+++M   R  P+      +L   + L + +++       + L + N   D+ 
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN---DLY 121

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            +NI+I+ +     +  A+ +  ++++    P  VT  SL+ GFC+  +V+DA  L+D +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G +P  V Y   +++ C+   +       +E+E K I P  VTYT ++ GLC   + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            +A +LL DM    +TP+ ITY+ ++ +F K   + +A +L  +M   +++P   TY+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           ++GLC++  +  A+ +   +         V+Y T+I   C    V   M  F +M ++G 
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
             +   Y                      ++  F Q GD+    E  + M   G+ PD +
Sbjct: 362 VSNTVTYN--------------------TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401

Query: 645 LIN 647
             N
Sbjct: 402 TYN 404


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 175/674 (25%), Positives = 299/674 (44%), Gaps = 105/674 (15%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N++  +++I GLC++ R+ DA   L E   +   PSV + NA++  YCK G  + A G+ 
Sbjct: 283 NLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIK 342

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            LM + G +PD ++YN LI+GLC  G ++EA E  N     G  P  IT++ L  G+   
Sbjct: 343 ALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKA 401

Query: 182 SQISGAWKV-----------------------------------IQKLLIKGSDPDIVTY 206
            +I  A +V                                   + ++   G  P++V Y
Sbjct: 402 ERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIY 461

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T +I GYC++G V   L++ ++M  +G   N   Y  L+  + +  ++ +A+ L+ +M+ 
Sbjct: 462 TSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQE 521

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G+ P ++ Y+ LI+G CK+ +   A +L+  M    ++P+  A+  +   LC+     E
Sbjct: 522 DGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEE 581

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A   +  L+    +   V Y  ++DG+ K GN   A  L  +++ +     + T++ L+ 
Sbjct: 582 A---YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQ 638

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             CK  K+ +A  +LD + + G++ + V YT  ++   +EG      +L  EM +    P
Sbjct: 639 ALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKP 698

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII----------RSFCKC 496
           +  TYTV I   CK  +++EA  L+ +M   GVTPD +TY+  I          R+F   
Sbjct: 699 SATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTL 758

Query: 497 K-----------------------------------------DLRKAFQLLNQMWLHNLE 515
           K                                         +L   +QLL +M  H L 
Sbjct: 759 KRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLN 818

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           PT  TY+ +I G C    L+ A  LL  +    IS  +  YT +IK  C      K ++F
Sbjct: 819 PTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSF 878

Query: 576 FCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
              M+E GF+  +  Y                KS FC +L   +  ++   +++     +
Sbjct: 879 VTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLK 938

Query: 621 GGDLGSVFELAAVM 634
            G +    +L A M
Sbjct: 939 AGHVDFCSQLLAAM 952



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 161/586 (27%), Positives = 286/586 (48%), Gaps = 18/586 (3%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAIL--FLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           RN Y+ +I+I GL +   +++A++  F+    G      + +L  ++   CK G    A+
Sbjct: 247 RNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTL--LIKGLCKEGRIHDAR 304

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
           GL   M   G+ P  ++YN +I G C +G M++AL     M ++G  PD  TY+ L  G 
Sbjct: 305 GLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL 364

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               ++  A +++   + +G  P ++T+T LI GYC+   +++ L+++  M+S   KL++
Sbjct: 365 -CGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDL 423

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
            AY VL++ + K  R+ EA   L EM A GL P++V Y+ +I G CK   V  A++++  
Sbjct: 424 QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKL 483

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  +   PN++ +G+++ GL + + + +A      +        V+ Y  +I G  K   
Sbjct: 484 MEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHE 543

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
              A +L+  + +  ++P    +N L    CK+G+  +A   L      G+  + VTYT+
Sbjct: 544 FDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTS 600

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++ + + GN      L+++M  +       TY+V+++ LCKQ KL EA+ +L+ M V G
Sbjct: 601 LVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSG 660

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           V  + + Y  II    K      A  L N+M     +P++ TY + I   C  G ++ A+
Sbjct: 661 VKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAE 720

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---TKSF 595
            L+  ++   ++   V Y   I      G + +A +   +MV+   E +   Y    K F
Sbjct: 721 HLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHF 780

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
             M L N    D               +L +V++L   M+K GL P
Sbjct: 781 LKMSLINAHYIDTS-------GMWNWIELNTVWQLLERMMKHGLNP 819



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 169/684 (24%), Positives = 300/684 (43%), Gaps = 69/684 (10%)

Query: 4   FVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMWDLYDDIKVSETPRN 62
           +V  R G  H A    A ++ L  + +   Y+ L+ ++   +    D+ + +   +  R 
Sbjct: 75  WVARRPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAIQAIRR 134

Query: 63  VYTNSIVIDGLCQQSRLQDAILF-LQETAGKEFG--------PSVVSLNAIMSRYCKLGF 113
           V    +V+   C    L+  + F + E  GK +         P  V+ N ++  YCK G 
Sbjct: 135 VGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGS 194

Query: 114 AEVAKGLFCLMLKYGLHPDAF-----------------------------------SYNI 138
             +A   FCL+ + G+  D +                                   SY I
Sbjct: 195 LAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTI 254

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI GL  A  + EAL     M + G   +   Y++L KG     +I  A  ++ ++ ++G
Sbjct: 255 LIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRG 314

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P + TY  +I GYC+ G +++ L ++ +M   G   +   Y+ L+  +C  G++DEA 
Sbjct: 315 VVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAE 373

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            LL    A G  P ++T++ LI G CK +++  A+++ + M S     +  A+G ++  L
Sbjct: 374 ELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVL 433

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
            +K  + EA+   + +  +    +VV+Y  +IDGY K+G +G A+++++ +  +   P+ 
Sbjct: 434 IKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNA 493

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            T+ SLIYG  ++ K+  A  L+  ++  G+ P  + YTT +   C++        L + 
Sbjct: 494 WTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEM 553

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           ME   + P    Y V+   LCK  + +EA   L      GV   ++TY +++  F K  +
Sbjct: 554 MEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRK---GVVLTKVTYTSLVDGFSKAGN 610

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
              A  L+ +M     +    TY++L+  LC    L  A  +L  +    +    VAYT 
Sbjct: 611 TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTI 670

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAF 618
           II     EG                      D+ KS F  M+S+G  P      V + ++
Sbjct: 671 IISEMIKEGK--------------------HDHAKSLFNEMISSGHKPSATTYTVFISSY 710

Query: 619 HQGGDLGSVFELAAVMIKSGLLPD 642
            + G +     L   M + G+ PD
Sbjct: 711 CKIGQIEEAEHLIGEMERDGVTPD 734



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 160/642 (24%), Positives = 270/642 (42%), Gaps = 85/642 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL--RHTDIMWDLYDDIKVSETPRNV 63
           Y ++G + DA+ + A M++        TYNSL+Y L     D   +L +          V
Sbjct: 329 YCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTV 388

Query: 64  YTNSIVIDGLCQQSRLQDAILF-----------------------------------LQE 88
            T + +I+G C+  R+ DA+                                     L E
Sbjct: 389 ITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNE 448

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
                  P+VV   +I+  YCK+G    A  +F LM   G HP+A++Y  LI+GL     
Sbjct: 449 MFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKK 508

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD------ 202
           + +A+     M   G+ P  I Y+ L +G     +   A+++ + +   G  PD      
Sbjct: 509 LHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNV 568

Query: 203 --------------------------IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
                                      VTYT L+ G+ + GN +    L E M+++G K 
Sbjct: 569 LTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKA 628

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           ++  YSVLL ++CK  +++EAL +L +M   G+K ++V Y+I+I  + K+ K   A  L+
Sbjct: 629 DLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLF 688

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           NEM S    P++  +   +   C+   I EA      +       DVV Y+I I+G   +
Sbjct: 689 NEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHM 748

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK----NGKVADARRLLDTIKL------ 406
           G +  A    +++++    P+  T+  L+  F K    N    D   + + I+L      
Sbjct: 749 GYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQL 808

Query: 407 ------HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
                 HGL P+ VTY++ +  +C+   ++    LL  M  KAI P    YT++IK  C 
Sbjct: 809 LERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCD 868

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
                + V  + DM   G  P   +Y+ +I   C   D  +A  L   +   +       
Sbjct: 869 IKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVA 928

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
           + IL DGL   G +     LL ++   +  +   +Y+ +  +
Sbjct: 929 WKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDS 970



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 223/483 (46%), Gaps = 19/483 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N +T   +I GL Q  +L  A+  + +       P V++   ++   CK    + A  LF
Sbjct: 492 NAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLF 551

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M K GL PD  +YN+L   LC +G  EEA  F   + R GV    +TY+ L  GF   
Sbjct: 552 EMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKA 608

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
                A  +I+K++ +G   D+ TY+VL+   C+   + E L + + M   G K N++AY
Sbjct: 609 GNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAY 668

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++++S M K G+ D A  L  EM + G KP   TY++ I   CK  ++ +A  L  EM  
Sbjct: 669 TIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMER 728

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG---- 357
             ++P+   +   + G      +  A      ++ ++C  +   Y +++  ++K+     
Sbjct: 729 DGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINA 788

Query: 358 ------------NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
                        +    QL  ++++  ++P++VT++S+I GFCK  ++ +A  LLD + 
Sbjct: 789 HYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHML 848

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
              + P+   YT  +   C+     + ++ + +M      P   +Y  +I GLC +    
Sbjct: 849 GKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYD 908

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
            A  L  D+  +    +++ +  +     K   +    QLL  M   +    S +Y++L 
Sbjct: 909 RAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLT 968

Query: 526 DGL 528
           D +
Sbjct: 969 DSI 971



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 192/423 (45%), Gaps = 18/423 (4%)

Query: 241 YSVLLSSMCKSGRIDEALGLLY-EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           Y++ L S+ +   + E +G LY  +   GL PD VTY+ +I   CK+  +  A + +  +
Sbjct: 147 YNLALRSLLRFD-MTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLL 205

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               +  +++   A+LLG C    + +A      + +  C ++   Y I+I G  +   +
Sbjct: 206 RESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCV 265

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA+ L   +++   S ++  +  LI G CK G++ DAR LLD + L G+ PS  TY   
Sbjct: 266 REALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAM 325

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ YC+ G ++  L +   ME     P   TY  +I GLC   KL EA +LL      G 
Sbjct: 326 IDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGG-KLDEAEELLNGAIARGF 384

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           TP  IT+  +I  +CK + +  A ++ + M   N +     Y +LI+ L     LK A  
Sbjct: 385 TPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKE 444

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM- 598
            L  +  + ++   V YT+II  +C  G V  A+  F  M  +G   +   Y    + + 
Sbjct: 445 TLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLI 504

Query: 599 --------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                         M  +G  P       ++    +  +  + F L  +M K+GL PD+ 
Sbjct: 505 QDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQ 564

Query: 645 LIN 647
             N
Sbjct: 565 AYN 567


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 242/461 (52%), Gaps = 3/461 (0%)

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           LK G  PDA +   L+ G+ +   + +A++  ++M   G+  DA TY IL  G     + 
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 185 SGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
             A K+ +K+  KG+   D+ TY ++I   C+ G   E L +   M+  G   +V+ YS 
Sbjct: 129 GLAIKLHEKM--KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSS 186

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +C+ GR+ EAL    EME  G+  D+ TY+ LI GL +     +     N M  + 
Sbjct: 187 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 246

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            SP++F    ++ GLC++  + EA+   + +       D++ YN +++G   +G + +A 
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDAT 306

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L+  L ++ I  ++ ++N LI G+CK+ K+ +A RL + ++  GL+PS VTY T + A 
Sbjct: 307 KLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGAL 366

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ G ++    L  EM+T        TY V++ GLCK   L+EA+ L + +      P+ 
Sbjct: 367 CQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNI 426

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
             ++ ++   C+   L +A++  +++  + LEP +  YNILI+GLC  G L  A  LL  
Sbjct: 427 EVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQ 486

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           ++E       + +  II+    E ++H+A+    +M  + F
Sbjct: 487 MEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNF 527



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 245/493 (49%), Gaps = 3/493 (0%)

Query: 92  KEFGPSVVSLNAIMSR-YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
           + F P  V++  ++   + + G  +  + LF  M + GL  DA +Y ILI+GLC A    
Sbjct: 71  RGFEPDAVTVTTLVKGVWMENGIPDAVQ-LFDEMTEKGLFGDAKTYGILINGLCKARKTG 129

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            A++    M +   + D  TY ++          + A  +  +++  G  PD+V Y+ L+
Sbjct: 130 LAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C+ G ++E L+  + M  +G   +V  Y+ L+  + ++G   E    L  M   G  
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD  T++ILI GLCK+ KV +A Q+   M  K   P+   +  ++ GLC    + +A   
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           F+SL       +V  YNI+I+GY K   I EA +L+ ++  K + PS VT+N+LI   C+
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           +G+V  A++L   ++  G      TY   ++  C+ G+++  + L Q ++     P    
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEV 428

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           +++++ G+C+  KL+EA +  +++   G+ PD I YN +I   C    L +A +LL QM 
Sbjct: 429 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 488

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
                P S T+N++I  L    ++  A  LL  ++  N S  +   + ++     +   H
Sbjct: 489 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWH 548

Query: 571 KAMTFFCQMVEKG 583
            A+      ++KG
Sbjct: 549 AALVSLPNALQKG 561



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 138/443 (31%), Positives = 213/443 (48%), Gaps = 40/443 (9%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSI 68
           + DAV +  +M E  L    +TY  L+  L   R T +   L++ +K      +V+T  +
Sbjct: 93  IPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMK-GNCKGDVFTYGM 151

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +ID LC+     +A+    E  G    P VV  +++M   C+ G  + A   F  M   G
Sbjct: 152 IIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 211

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           +  D ++YN LIHGL  AG  +E   F N M   G  PDA T++IL  G     ++  A 
Sbjct: 212 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 271

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++++ +  KG +PDI+TY  L+ G C +G +E+  KL E +  +G KLNV +Y++L++  
Sbjct: 272 QILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGY 331

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYS------------------------------- 277
           CK  +IDEA  L  EM   GLKP  VTY+                               
Sbjct: 332 CKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKL 391

Query: 278 ----ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
               +L+ GLCK   + +AI L+  +      PN      +L G+C    + EA   FD 
Sbjct: 392 STYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDE 451

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +  +    D + YNI+I+G    G + EAV+L  Q+ EK   P  +TFN +I    K  +
Sbjct: 452 ISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENE 511

Query: 394 VADARRLLDTIKLHGLEP-SAVT 415
           + +A +LL+ ++     P  AVT
Sbjct: 512 IHEAIQLLEEMRNRNFSPDEAVT 534



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 213/453 (47%), Gaps = 21/453 (4%)

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           L +G +PD VT T L+ G      + + ++L + M  +G   +   Y +L++ +CK+ + 
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
             A+ L  +M+    K D+ TY ++I  LCK     +A+ +++EM    I P+   + ++
Sbjct: 129 GLAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + GLC    + EA  +F  +       DV  YN +I G  + G   E       ++++  
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
           SP   TF  LI G CK GKV +A+++L+ +   G EP  +TY T MN  C  G ++    
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L + +  + I     +Y ++I G CK  K+ EA +L E+M   G+ P  +TYNT+I + C
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALC 367

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           +   +R A +L  +M         +TY +L+DGLC NG L+ A  L  S+++        
Sbjct: 368 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIE 427

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
            ++ ++   C  G + +A   F        EIS              NG  PD     ++
Sbjct: 428 VFSILLDGMCRAGKLEEAWKQFD-------EIS-------------KNGLEPDTIAYNIL 467

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +      G L    +L   M + G LPD    N
Sbjct: 468 INGLCNKGMLSEAVKLLWQMEEKGCLPDSITFN 500



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 192/373 (51%), Gaps = 5/373 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
           + GM  +A+ + ++M    +   +  Y+SL+  L    R  + + + + +++      +V
Sbjct: 158 KDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL-EFFKEMEGRGISADV 216

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           YT + +I GL +    ++   FL     + F P   +   ++   CK G    A+ +  L
Sbjct: 217 YTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILEL 276

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G  PD  +YN L++GLC+ G +E+A +    +   G++ +  +Y+IL  G+    +
Sbjct: 277 MHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQK 336

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I  A+++ +++  KG  P  VTY  LI   CQ G V    KL   M + G  L +  Y V
Sbjct: 337 IDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 396

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           LL  +CK+G ++EA+ L   ++    KP++  +SIL+ G+C+  K+ +A + ++E+    
Sbjct: 397 LLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 456

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P++ A+  ++ GLC K M++EA      +    C+ D + +N++I   +K   I EA+
Sbjct: 457 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 516

Query: 364 QLYRQLIEKRISP 376
           QL  ++  +  SP
Sbjct: 517 QLLEEMRNRNFSP 529



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 106/209 (50%), Gaps = 3/209 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPRN 62
           Y +   + +A  +  +M+   LK S  TYN+L+  L  +        L+ +++       
Sbjct: 331 YCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 390

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T  +++DGLC+   L++AI   Q     E  P++   + ++   C+ G  E A   F 
Sbjct: 391 LSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 450

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            + K GL PD  +YNILI+GLC  G + EA++    M   G  PD+IT++++ +     +
Sbjct: 451 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 510

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           +I  A ++++++  +   PD    ++L+C
Sbjct: 511 EIHEAIQLLEEMRNRNFSPDEAVTSMLLC 539


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 170/602 (28%), Positives = 281/602 (46%), Gaps = 84/602 (13%)

Query: 29  VSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILF 85
            S+ TY +L+  L  +   D    L   +  +    NV T + +IDGLC+  R  DAI  
Sbjct: 8   ASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQT 67

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
           ++                                    ML+ G  PD  +YN LIHGLC+
Sbjct: 68  VKR-----------------------------------MLRSGCEPDLVTYNSLIHGLCM 92

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
           A  M++A     ++ R+G  P+ ITYS L        ++  A  +I++++++GS  ++V 
Sbjct: 93  ANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVV 152

Query: 206 YTVLICGYCQIGNVEEGLKLR--EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           Y   I G+C+        + R  + M+  G   +V+ Y+  +S +CK+G++D+ L +L E
Sbjct: 153 YIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEE 212

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS--------------- 308
           M+  G+ PD+VT+  +I GLCK +++  A Q++  M  +   P+S               
Sbjct: 213 MDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANR 272

Query: 309 ----------------------FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
                                 + H A +  LC       A+     +I S  + +++ Y
Sbjct: 273 LDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSY 332

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKR-ISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           N +IDG  K GN+ +A +L R++++     P ++ FN+LI GFCK G+++ A +LL  +K
Sbjct: 333 NFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMK 392

Query: 406 LHGL-EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              +  P  VTY T ++   + G++++   LLQEM+     P  VTY  +I G  K    
Sbjct: 393 AKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMY 452

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN--LEPTSATYN 522
           +EA  L ++M   G  PD ITYNT++ +F K   + KA  +  Q+        P + TY 
Sbjct: 453 EEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYR 512

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD--VHKAMTFFCQMV 580
           ILIDG C   D +    LL  +     S     Y  +I A  AE +    KA+  + QM+
Sbjct: 513 ILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLI-AKLAETEEVPSKALAVYQQML 571

Query: 581 EK 582
           ++
Sbjct: 572 DQ 573



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 279/556 (50%), Gaps = 32/556 (5%)

Query: 13  HDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVYTNSI 68
           HDA+  + +M     +  + TYNSL++ L   + M D    L + ++    P ++  +++
Sbjct: 62  HDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTL 121

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV---AKGLFCL-- 123
           VI   C++ RL  A   ++E        SV +L   +   C  GF E    +    C   
Sbjct: 122 VIWN-CRRRRLDQARGLIREMI---LRGSVCNLVVYID--CIFGFCEARCQSSRYECRDG 175

Query: 124 --MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M++ G  PD  +YN  I GLC AG +++ LE   +M R G+ PD +T+  +  G    
Sbjct: 176 DEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKA 235

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC---QIGNVEEGLKLREVMLSQGFKLNV 238
           ++I  A++V + +L +G  PD +TY++++       ++  V+E L+  + M   G  + V
Sbjct: 236 NRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAM-KAGCVMEV 294

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             ++  + ++C+SG+   A  +L  M   G  P+L++Y+ +I GLCK   V  A +L  +
Sbjct: 295 YTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRK 354

Query: 299 M----CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN-CIQDVVLYNIMIDGY 353
           M    C K   P+      ++ G C+   +++A      +   N C+ DVV YN +IDG 
Sbjct: 355 MLDSGCCK---PDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQ 411

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K G++ +A  L +++      P++VT+ +LI G+ K+G   +A  L D +   G  P  
Sbjct: 412 SKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDI 471

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKA--IGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           +TY T ++A+ + G + +   + Q+++ K     P  +TY ++I G C+    ++ + LL
Sbjct: 472 ITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLL 531

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDL-RKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           ++M   G + D  TYN +I    + +++  KA  +  QM   +  P+++ +N L+     
Sbjct: 532 QEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLR 591

Query: 531 NGDLKNADCLLVSLQE 546
            GD+ +A  ++  + E
Sbjct: 592 TGDVNSARSMVQEMNE 607



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 156/617 (25%), Positives = 260/617 (42%), Gaps = 102/617 (16%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G      +Y  LI GLC +G ++ A      M   G  P+ +TY+ L  G     +
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE-GLKLREVMLSQGFKLNVIAYS 242
              A + ++++L  G +PD+VTY  LI G C    +++ GL L+E ++  GF  N I YS
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQE-LVRNGFAPNHITYS 119

Query: 243 VLLSSMCKSGRIDEALGLLYEM--------------------EA---------------- 266
            L+   C+  R+D+A GL+ EM                    EA                
Sbjct: 120 TLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMI 179

Query: 267 -VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G  PD+VTY+  I GLCK  K+ K +++  EM    I P+     +I+ GLC+   I 
Sbjct: 180 ESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRID 239

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI---------------GEAVQLYRQ-- 368
           +A   F  ++   C+ D + Y+IM+D   +   +               G  +++Y    
Sbjct: 240 DAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNA 299

Query: 369 --------------------LIEKRISPSIVTFNSLIYGFCKNGKVADA----RRLLDTI 404
                               +IE    P+++++N +I G CK+G V DA    R++LD+ 
Sbjct: 300 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDS- 358

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG-PTHVTYTVVIKGLCKQWK 463
                +P  + + T ++ +C+ G + +   LL EM+ K I  P  VTY  +I G  K   
Sbjct: 359 --GCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGS 416

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           L++A  LL++M  +G  P+ +TY  +I  + K     +A  L ++M      P   TYN 
Sbjct: 417 LKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNT 476

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHN--ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           ++      G +  A+ +   L+      S   + Y  +I  +C   D  + +T   +M  
Sbjct: 477 VLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTA 536

Query: 582 KGFEISIRDYTK----------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
           +G+      Y                  + +  ML     P   I   ++  F + GD+ 
Sbjct: 537 RGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVN 596

Query: 626 SVFELAAVMIKSGLLPD 642
           S   +   M + G L D
Sbjct: 597 SARSMVQEMNEKGHLVD 613



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 119/247 (48%), Gaps = 5/247 (2%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG-PSVVSLNAIMSRYCKLGFAEVAK 118
           P  ++ N++ I G C+  RL  A   L E   K    P VV+ N ++    K G  + AK
Sbjct: 363 PDVIFFNTL-ISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAK 421

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M   G  P+  +Y  LI+G    G  EEA    ++M   G  PD ITY+ +   F
Sbjct: 422 LLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAF 481

Query: 179 HLLSQISGAWKVIQKLLIKGS--DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
                +S A  V Q+L  K S   PD +TY +LI GYC+  + E+GL L + M ++G+  
Sbjct: 482 SKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSC 541

Query: 237 NVIAYSVLLSSMCKSGRI-DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           +   Y+VL++ + ++  +  +AL +  +M      P    ++ L+R   +   V+ A  +
Sbjct: 542 DSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSM 601

Query: 296 YNEMCSK 302
             EM  K
Sbjct: 602 VQEMNEK 608


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 175/656 (26%), Positives = 299/656 (45%), Gaps = 57/656 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDI-KVSETPRNV 63
           R GMV  A+ +     +L + +   +   +L +L      D++ D +D + +    P  V
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGV 217

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             +  V+D L  +  +  A+ F +    + F   +VS N ++ +   +   EVA  L  L
Sbjct: 218 SAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVL-KGLSVDQIEVASRLLSL 276

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +L  G  P+  ++  LI+G C  G M+ A +    M + G+EPD I YS L  G+     
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +    K+  + L KG   D+V ++  I  Y + G++     + + ML QG   NV+ Y++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +C+ GRI EA G+  ++   G++P +VTYS LI G CK   +     LY +M    
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEA 362
             P+   +G ++ GL ++ ++  A M F   ++   I+ +VV++N +IDG+ +L    EA
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHA-MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++++R +    I P + TF +++      G++ +A  L   +   GLEP A+ Y T ++A
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575

Query: 423 YCEEGNIQRLLALLQEMETKAIG-----------------------------------PT 447
           +C+       L L   M+   I                                    P 
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            VTY  +I G C   +L EA ++ E + V    P+ +T   +I   CK  D+  A ++ +
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 695

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M     +P + TY  L+D    + D++ +  L   +QE  IS + V+Y+ II   C  G
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755

Query: 568 DVHKAMTFFCQMVEK-------GFEISIRDYTKS--------FFCMMLSNGFPPDQ 608
            V +A   F Q ++         + I IR Y K          +  ML NG  PD 
Sbjct: 756 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 195/442 (44%), Gaps = 35/442 (7%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T +I+I GLCQ  R+ +A     +   +   PS+V+ ++++  +CK G       L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+K G  PD   Y +L+ GL   G M  A+ F+  M    +  + + ++ L  G+  L
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           ++   A KV + + I G  PD+ T+T ++      G +EE L L   M   G + + +AY
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569

Query: 242 SVLLSSMCKS-----------------------------------GRIDEALGLLYEMEA 266
             L+ + CK                                     RI++A      +  
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
             ++PD+VTY+ +I G C   ++ +A +++  +      PN+     ++  LC+   +  
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 689

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A   F  +       + V Y  ++D + K  +I  + +L+ ++ EK ISPSIV+++ +I 
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G CK G+V +A  +        L P  V Y   +  YC+ G +     L + M    + P
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809

Query: 447 THVTYTVVIKGLCKQWKLQEAV 468
             +    + +    +W + + V
Sbjct: 810 DDLLQRALSEYNPPKWLMSKGV 831


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 164/595 (27%), Positives = 265/595 (44%), Gaps = 31/595 (5%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L DAI            PSV+    +M    ++G  +V   L   M    +  +A+S+ I
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           L+   C    +  AL     + + G  P  +T++ L  G  +  +IS A  +  ++    
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM---- 177

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P++VT+T L+ G C+ G V E + L + ML  G + N I Y  ++  MCK G    AL
Sbjct: 178 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 259 GLLYEMEAVG-LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
            LL +ME V  + P++V Y+ +I GL K  +   A  L+ EM  K I P+   +  ++ G
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
            C     ++A      ++      DVV ++ +I+ +VK G   EA +LY +++ + I PS
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS 357

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            VT++S+I GFCK  ++  A  +       G  P  +T+ T +  YC    +   + LL 
Sbjct: 358 TVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 417

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM    +    +TYT +I G C+   L  A  LL++M   GV P+ +T NT++   C   
Sbjct: 418 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNG 477

Query: 498 DLRKAFQLLNQMW-----------LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
            L+ A ++   M             + +EP   TYNILI GL   G    A+ L   +  
Sbjct: 478 KLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPH 537

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS-------IRDYTKS----- 594
             I    + Y+++I   C +  + +A   F  M  K F          I  Y K+     
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDD 597

Query: 595 ---FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
               FC M   G   D      ++  F +  ++    ++   MI SG+ PD   I
Sbjct: 598 GLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITI 652



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 148/561 (26%), Positives = 273/561 (48%), Gaps = 19/561 (3%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D++  L+  +++   P N Y+ +I++   C  S+L  A+    +     F P+VV+ N +
Sbjct: 98  DVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTL 157

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +   C       A  LF  M K    P+  ++  L++GLC  G + EA+   + M   G+
Sbjct: 158 LHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGL 213

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLL-IKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           +P+ ITY  +  G   +     A  +++K+  +    P++V Y  +I G  + G   +  
Sbjct: 214 QPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAH 273

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
            L   M  +    +++ Y+ +++  C SGR  +A  LL EM    + PD+VT+S LI   
Sbjct: 274 NLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAF 333

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
            K+ K  +A +LY+EM  + I P++  + +++ G C++  +  A   F       C  D+
Sbjct: 334 VKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDI 393

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           + +N +I GY +   + + ++L  ++ E  +  + +T+ +LI+GFC+ G +  A+ LL  
Sbjct: 394 ITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQE 453

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET-----------KAIGPTHVTYT 452
           +   G+ P+ VT  T ++  C+ G ++  L + + M+              + P   TY 
Sbjct: 454 MISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYN 513

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
           ++I GL  + K  EA +L E+M   G+ PD ITY+++I   CK   L +A Q+ + M   
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 573

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
           +  P   T+N LI G C  G + +   L   + +  I    + Y T+I       ++  A
Sbjct: 574 SFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGA 633

Query: 573 MTFFCQMVEKGF---EISIRD 590
           +  F +M+  G     I+IR+
Sbjct: 634 LDIFQEMISSGVYPDTITIRN 654



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 138/543 (25%), Positives = 263/543 (48%), Gaps = 13/543 (2%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           A+    K+ +L    ++ T+N+LL+ L   D + +  D       P NV T + +++GLC
Sbjct: 135 ALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKP-NVVTFTTLMNGLC 193

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LHPDA 133
           ++ R+ +A+  L         P+ ++   I+   CK+G    A  L   M +   + P+ 
Sbjct: 194 REGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNV 253

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
             YN +I GL   G   +A     +M    + PD +TY+ +  GF +  + S A +++Q+
Sbjct: 254 VIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQE 313

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +L +  +PD+VT++ LI  + + G   E  +L + ML +    + + YS ++   CK  R
Sbjct: 314 MLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNR 373

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +D A  + Y     G  PD++T++ LI G C+  +V   I+L +EM    +  N+  +  
Sbjct: 374 LDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 433

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++ G C+   +  A+     +I S    +VV  N ++DG    G + +A+++++ + + +
Sbjct: 434 LIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 374 -----------ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
                      + P + T+N LI G    GK  +A  L + +   G+ P  +TY++ ++ 
Sbjct: 494 MDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C++  +     +   M +K+  P  VT+  +I G CK   + + ++L  +M   G+  D
Sbjct: 554 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVAD 613

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            ITY T+I  F K  ++  A  +  +M    + P + T   ++ GL    +L+ A  +L 
Sbjct: 614 AITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLE 673

Query: 543 SLQ 545
            LQ
Sbjct: 674 DLQ 676



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 240/488 (49%), Gaps = 27/488 (5%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDI----------KVS 57
           R G V +AV ++ +M E  L+ +  TY +++      D M  + D +          +VS
Sbjct: 194 REGRVVEAVALLDRMLEDGLQPNQITYGTIV------DGMCKMGDTVSALNLLRKMEEVS 247

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NV   + +IDGL +  R  DA     E   KE  P +V+ N +++ +C  G    A
Sbjct: 248 HIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDA 307

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   ML+  ++PD  +++ LI+     G   EA E  ++M    + P  +TYS +  G
Sbjct: 308 EQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDG 367

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F   +++  A  +      KG  PDI+T+  LI GYC+   V++G+KL   M   G   N
Sbjct: 368 FCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN 427

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            I Y+ L+   C+ G ++ A  LL EM + G+ P++VT + L+ GLC   K+  A++++ 
Sbjct: 428 TITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK 487

Query: 298 EMCSKR-----------ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            M   +           + P+   +  ++ GL  +    EA   ++ +     + D + Y
Sbjct: 488 AMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           + MIDG  K   + EA Q++  +  K  SP +VTFN+LI G+CK G V D   L   +  
Sbjct: 548 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQ 607

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+   A+TY T +  + +  NI   L + QEM +  + P  +T   ++ GL  + +L+ 
Sbjct: 608 RGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELER 667

Query: 467 AVQLLEDM 474
           AV +LED+
Sbjct: 668 AVAMLEDL 675



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/563 (26%), Positives = 259/563 (46%), Gaps = 36/563 (6%)

Query: 112 GFAEV-----AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
           GF E+     A  LF  M++    P    +  L+  +   G  +  +     M    +  
Sbjct: 55  GFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPC 114

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           +A +++IL K F   S++  A     K+   G  P +VT+  L+ G C    + E L L 
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDL- 173

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
                Q  K NV+ ++ L++ +C+ GR+ EA+ LL  M   GL+P+ +TY  ++ G+CK 
Sbjct: 174 ---FHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230

Query: 287 DKVHKAIQLYNEMCS-KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
                A+ L  +M     I PN   +  I+ GL +    ++A   F  +       D+V 
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN MI+G+   G   +A QL ++++E++I+P +VTF++LI  F K GK  +A  L D + 
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEML 350

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
              + PS VTY++ ++ +C++  +     +     TK   P  +T+  +I G C+  ++ 
Sbjct: 351 PRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVD 410

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           + ++LL +M   G+  + ITY T+I  FC+  DL  A  LL +M    + P   T N L+
Sbjct: 411 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLL 470

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKV-----------AYTTIIKAHCAEGDVHKAMT 574
           DGLC NG LK+A  +  ++Q+  + +               Y  +I     EG   +A  
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEE 530

Query: 575 FFCQMVEKGF---------------EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
            + +M  +G                + S  D     F  M S  F PD      ++  + 
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYC 590

Query: 620 QGGDLGSVFELAAVMIKSGLLPD 642
           + G +    EL   M + G++ D
Sbjct: 591 KAGMVDDGLELFCEMGQRGIVAD 613



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 232/505 (45%), Gaps = 49/505 (9%)

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L  GFH +  +  A  +   ++     P ++ +  L+    ++G  +  + L + M    
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              N  ++++L+   C   ++  AL    ++  +G  P +VT++ L+ GLC +D++ +A+
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI------------------ 335
            L+++MC     PN      ++ GLC +  + EA    D ++                  
Sbjct: 172 DLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 336 ------------------MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
                             +S+ I +VV+YN +IDG  K G   +A  L+ ++ EK I P 
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPD 287

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           IVT+N +I GFC +G+ +DA +LL  +    + P  VT++  +NA+ +EG       L  
Sbjct: 288 IVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYD 347

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM  ++I P+ VTY+ +I G CKQ +L  A  +       G +PD IT+NT+I  +C+ K
Sbjct: 348 EMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAK 407

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            +    +LL++M    L   + TY  LI G C  GDL  A  LL  +    +    V   
Sbjct: 408 RVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCN 467

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIA 617
           T++   C  G +  A+  F  M +   +I   D ++ F      NG  PD +   +++  
Sbjct: 468 TLLDGLCDNGKLKDALEMFKAMQKSKMDI---DASRPF------NGVEPDVQTYNILICG 518

Query: 618 FHQGGDLGSVFELAAVMIKSGLLPD 642
               G      EL   M   G++PD
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPD 543



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 234/449 (52%), Gaps = 17/449 (3%)

Query: 8   RTGMVHDAVFVIAKMKELD-LKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRN 62
           + G    A+ ++ KM+E+  +  ++  YN+++  L    RH+D   +L+ +++  E   +
Sbjct: 229 KMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSD-AHNLFIEMQEKEIFPD 287

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T + +I+G C   R  DA   LQE   ++  P VV+ +A+++ + K G    A+ L+ 
Sbjct: 288 IVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYD 347

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML   + P   +Y+ +I G C    ++ A          G  PD IT++ L  G+    
Sbjct: 348 EMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAK 407

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++    K++ ++   G   + +TYT LI G+CQ+G++     L + M+S G   NV+  +
Sbjct: 408 RVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCN 467

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAV-----------GLKPDLVTYSILIRGLCKQDKVHK 291
            LL  +C +G++ +AL +   M+             G++PD+ TY+ILI GL  + K  +
Sbjct: 468 TLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLE 527

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A +LY EM  + I P++  + +++ GLC++  + EA   FDS+   +   DVV +N +I 
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLIT 587

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           GY K G + + ++L+ ++ ++ I    +T+ +LIYGF K   +  A  +   +   G+ P
Sbjct: 588 GYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYP 647

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEME 440
             +T    +     +  ++R +A+L++++
Sbjct: 648 DTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 207/414 (50%), Gaps = 16/414 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
           + G   DA  +  +M+E ++   I TYN ++       R +D    L + ++    P +V
Sbjct: 265 KDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINP-DV 323

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T S +I+   ++ +  +A     E   +   PS V+ ++++  +CK    + A+ +F L
Sbjct: 324 VTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYL 383

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
               G  PD  ++N LI G C A  +++ ++  ++M   G+  + ITY+ L  GF  +  
Sbjct: 384 TPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 443

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS-----------Q 232
           ++ A  ++Q+++  G  P++VT   L+ G C  G +++ L++ + M              
Sbjct: 444 LNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFN 503

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G + +V  Y++L+  +   G+  EA  L  EM   G+ PD +TYS +I GLCKQ ++ +A
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            Q+++ M SK  SP+      ++ G C+  M+ +    F  +     + D + Y  +I G
Sbjct: 564 TQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYG 623

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           + K+ NI  A+ +++++I   + P  +T  +++ G     ++  A  +L+ +++
Sbjct: 624 FRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQM 677



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 206/437 (47%), Gaps = 25/437 (5%)

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           G+ +I  +++ + L   M+      +VI +  L+  + + GR D  + L  +ME + +  
Sbjct: 55  GFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPC 114

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           +  +++IL++  C   K+  A+  + ++      P       +L GLC ++ I+EA   F
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             +    C  +VV +  +++G  + G + EAV L  +++E  + P+ +T+ +++ G CK 
Sbjct: 175 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230

Query: 392 GKVADARRLLDTIK-LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           G    A  LL  ++ +  + P+ V Y T ++   ++G       L  EM+ K I P  VT
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  +I G C   +  +A QLL++M    + PD +T++ +I +F K     +A +L ++M 
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEML 350

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
             ++ P++ TY+ +IDG C    L  A+ +         S   + + T+I  +C    V 
Sbjct: 351 PRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVD 410

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
             +    +M E G   +   YT       L +GF      C+V        GDL +  +L
Sbjct: 411 DGIKLLHEMTEAGLVANTITYTT------LIHGF------CQV--------GDLNAAQDL 450

Query: 631 AAVMIKSGLLPDKFLIN 647
              MI SG+ P+    N
Sbjct: 451 LQEMISSGVCPNVVTCN 467



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 176/378 (46%), Gaps = 49/378 (12%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYT 65
           +G   DA  ++ +M E  +   + T+++L+         ++   LYD++       +  T
Sbjct: 301 SGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVT 360

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL-------------- 111
            S +IDG C+Q+RL  A      T  K   P +++ N +++ YC+               
Sbjct: 361 YSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 420

Query: 112 ----------------GFAEV-----AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
                           GF +V     A+ L   M+  G+ P+  + N L+ GLC  G ++
Sbjct: 421 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLK 480

Query: 151 EALEFTNDMGR-----------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           +ALE    M +           +GVEPD  TY+IL  G     +   A ++ +++  +G 
Sbjct: 481 DALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGI 540

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            PD +TY+ +I G C+   ++E  ++ + M S+ F  +V+ ++ L++  CK+G +D+ L 
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLE 600

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           L  EM   G+  D +TY  LI G  K D +  A+ ++ EM S  + P++     +L GL 
Sbjct: 601 LFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLW 660

Query: 320 EKEMITEARMYFDSLIMS 337
            KE +  A    + L MS
Sbjct: 661 SKEELERAVAMLEDLQMS 678



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 27/297 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           Y R   V D + ++ +M E  L  +  TY +L++        +   DL  ++  S    N
Sbjct: 403 YCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPN 462

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + ++DGLC   +L+DA+        K    S + ++A  SR               
Sbjct: 463 VVTCNTLLDGLCDNGKLKDALEMF-----KAMQKSKMDIDA--SRPFN------------ 503

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
                G+ PD  +YNILI GL   G   EA E   +M   G+ PD ITYS +  G    S
Sbjct: 504 -----GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 558

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A ++   +  K   PD+VT+  LI GYC+ G V++GL+L   M  +G   + I Y 
Sbjct: 559 RLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYI 618

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            L+    K   ID AL +  EM + G+ PD +T   ++ GL  ++++ +A+ +  ++
Sbjct: 619 TLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDL 675


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 240/459 (52%), Gaps = 6/459 (1%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T   +I G C+  ++  A+  L E       P++V+  +++ + C+L F + A  +F  
Sbjct: 53  FTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQ 112

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+   + PDAF Y ++I  LC    ++ A  +   M + G  PD +TY++L        +
Sbjct: 113 MIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACK 172

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
                ++ +++L KG  P++VTY  ++ GYC+ G +++ L L   +   G   +   YS 
Sbjct: 173 WEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYST 232

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +CK  R DEA   L+EM A G   D++ Y+  I GLCK  K+ +A  ++ +M    
Sbjct: 233 LIDGLCKHDRHDEARE-LFEM-AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAG 290

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA- 362
            +P+  ++  I+  LC+   ++EA+   D  +   C+  V +  +++DG  K   + EA 
Sbjct: 291 CAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEAC 350

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           V L R L     +PS+VT++++I G CK  ++ DA  +L  ++  G  P  VTYT  ++A
Sbjct: 351 VILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDA 410

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +C+ G +     L Q M  +      V Y ++I+G C+  K+ EA+ ++E+M   G+ P+
Sbjct: 411 FCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPN 470

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL---EPTS 518
            ++ +TI+   CK   + +A  L+ +M   +L   +P S
Sbjct: 471 VVSLSTIVDGLCKESRVEEARLLMEKMNFESLPDSDPVS 509



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 240/492 (48%), Gaps = 4/492 (0%)

Query: 83  ILFLQETAGKE-FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           +LF Q    +  F  +  + N+++  +   G    A  +F   L     PD F+Y  LI 
Sbjct: 1   MLFFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIR 60

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
           G C A  + +A+    +M   G+ P  +T+  L +    L+    A ++  +++     P
Sbjct: 61  GFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKP 120

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D   YTV+I   C+I  ++      E M+  G   + + Y+VL+ S+ K+ + ++   + 
Sbjct: 121 DAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIF 180

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            EM + G  P+LVTY+ ++ G CK  ++ +A+ L   +     SP+   +  ++ GLC+ 
Sbjct: 181 EEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKH 240

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
           +   EAR  F+  + +  +QDV++Y   I G  K G + EA  ++ ++IE   +P  V++
Sbjct: 241 DRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSY 298

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM-E 440
           N +IY  CK+ +V++A+ L+D        P     T  ++  C+   ++    +L+ M E
Sbjct: 299 NVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLE 358

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
           T    P+ VTY+ VI GLCK  +L +A  +L+ M   G  PD +TY  II +FCK   L 
Sbjct: 359 TGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLD 418

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +A +L  +M           YNILI G C    +  A  ++  +    I    V+ +TI+
Sbjct: 419 EARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIV 478

Query: 561 KAHCAEGDVHKA 572
              C E  V +A
Sbjct: 479 DGLCKESRVEEA 490



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 240/481 (49%), Gaps = 3/481 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N YT + +++        ++A    ++     F P   +   ++  +CK      A  L 
Sbjct: 16  NTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLL 75

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G+ P   ++  LI  LC     ++AL+  + M    V+PDA  Y+++      +
Sbjct: 76  GEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKI 135

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           +++  A    ++++  G  PD VTYTVL+    +    E+G ++ E MLS+G    ++ Y
Sbjct: 136 NKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTY 195

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +++  CK+GRID+AL L+  ++  G  P    YS LI GLCK D+  +A +L+ EM +
Sbjct: 196 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EMAA 254

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +  +   + + + GLC+   + EA+     +I + C  D V YN++I    K   + E
Sbjct: 255 GDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 313

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-LEPSAVTYTTFM 420
           A +L  Q +E++  P +     L+ G CK+ +V +A  +L+ +   G   PS VTY+  +
Sbjct: 314 AKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVI 373

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C+   +     +LQ+M      P  VTYT +I   CK  +L EA +L + M+  G  
Sbjct: 374 DGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCA 433

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            D + YN +IR +C+   + +A  ++ +M    ++P   + + ++DGLC    ++ A  L
Sbjct: 434 LDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLL 493

Query: 541 L 541
           +
Sbjct: 494 M 494



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 193/404 (47%), Gaps = 45/404 (11%)

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
           F+ +   Y  L+   CK+ +I +A+ LL EM+A G+ P +VT+  LIR LC+ +   KA+
Sbjct: 48  FRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKAL 107

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           Q++++M   ++ P++F +  ++  LC+   +  A  YF+ ++ S C+ D V Y +++   
Sbjct: 108 QIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSL 167

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K     +  Q++ +++ K  SP +VT+ +++ G+CK G++  A  L+  +K  G  PS 
Sbjct: 168 FKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSG 227

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
             Y+T ++  C+         L  EM    +    + YT  I GLCK  KL EA  +   
Sbjct: 228 SLYSTLIDGLCKHDRHDEARELF-EMAAGDVQDV-IVYTSFISGLCKAGKLDEAKAVHVK 285

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ------------------------- 508
           M   G  PD ++YN II S CK   + +A +L++Q                         
Sbjct: 286 MIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRR 345

Query: 509 -----------MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
                      +   +  P+  TY+ +IDGLC    L +A  +L  ++        V YT
Sbjct: 346 VEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYT 405

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTKS 594
            II A C  G + +A   F +M E+G       + I IR Y ++
Sbjct: 406 AIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRA 449



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 220/443 (49%), Gaps = 6/443 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           + +   +  AV ++ +MK   +  +I T+ SL   L  L  TD    ++  +   +   +
Sbjct: 62  FCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPD 121

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +  ++VI  LC+ ++L  A  + +        P  V+   ++    K    E    +F 
Sbjct: 122 AFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFE 181

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML  G  P+  +Y  +++G C AG +++AL     +   G  P    YS L  G     
Sbjct: 182 EMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHD 241

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A ++ +  +  G   D++ YT  I G C+ G ++E   +   M+  G   + ++Y+
Sbjct: 242 RHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYN 299

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC-S 301
           V++ S+CK  R+ EA  L+ +       P +   ++L+ GLCK  +V +A  +   M  +
Sbjct: 300 VIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLET 359

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
              +P+   + A++ GLC+ + + +A +    +  + C+ DVV Y  +ID + K+G + E
Sbjct: 360 GDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDE 419

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +L++++ E+  +  +V +N LI G+C+  KV +A  +++ +   G++P+ V+ +T ++
Sbjct: 420 ARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVD 479

Query: 422 AYCEEGNIQRLLALLQEMETKAI 444
             C+E  ++    L+++M  +++
Sbjct: 480 GLCKESRVEEARLLMEKMNFESL 502



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 3/151 (1%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           ++  +   +V T S VIDGLC+  RL DA + LQ+       P VV+  AI+  +CK+G 
Sbjct: 357 LETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGR 416

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            + A+ LF  M + G   D  +YNILI G C A  ++EA+    +M   G++P+ ++ S 
Sbjct: 417 LDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLST 476

Query: 174 LAKGFHLLSQISGAWKVIQKL---LIKGSDP 201
           +  G    S++  A  +++K+    +  SDP
Sbjct: 477 IVDGLCKESRVEEARLLMEKMNFESLPDSDP 507


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 161/622 (25%), Positives = 289/622 (46%), Gaps = 48/622 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDI-KVSETPRNV 63
           R GMV  A+ +     +L + +   +   +L +L      D++ D +D + +    P  V
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGV 217

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             +  V+D L  +  +  A+ F +    + F   +VS N ++ +   +   EVA  L  L
Sbjct: 218 SAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVL-KGLSVDQIEVASRLLSL 276

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +L  G  P+  ++  LI+G C  G M+ A +    M + G+EPD I YS L  G+     
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +    K+  + L KG   D+V ++  I  Y + G++     + + ML QG   NV+ Y++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +C+ GRI EA G+  ++   G++P +VTYS LI G CK   +     LY +M    
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEA 362
             P+   +G ++ GL ++ ++  A M F   ++   I+ +VV++N +IDG+ +L    EA
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHA-MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515

Query: 363 VQLYRQLIEKRISPSIVTFNSLIY------GFCKNGK----------------------- 393
           ++++R +    I P + TF +++        FCK+ K                       
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 575

Query: 394 ------------VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
                       + DA +  + +    +EP  VTY T +  YC    +     + + ++ 
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 635

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
              GP  VT T++I  LCK   +  A+++   M   G  P+ +TY  ++  F K  D+  
Sbjct: 636 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 695

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           +F+L  +M    + P+  +Y+I+IDGLC  G +  A  +     +  +    VAY  +I+
Sbjct: 696 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 755

Query: 562 AHCAEGDVHKAMTFFCQMVEKG 583
            +C  G + +A   +  M+  G
Sbjct: 756 GYCKVGRLVEAALLYEHMLRNG 777



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 219/481 (45%), Gaps = 41/481 (8%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D  +DL+  ++      ++   S +IDG  +   L        +   K     VV  ++ 
Sbjct: 303 DRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSST 362

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +  Y K G    A  ++  ML  G+ P+  +Y ILI GLC  G + EA      + + G+
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
           EP  +TYS L  GF     +   + + + ++  G  PD+V Y VL+ G  + G +   ++
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR--- 281
               ML Q  +LNV+ ++ L+   C+  R DEAL +   M   G+KPD+ T++ ++R   
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542

Query: 282 ---GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
                CK  K    +QL++ M   +IS +      ++  L +   I +A  +F++LI   
Sbjct: 543 MEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 602

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              D+V YN MI GY  L  + EA +++  L      P+ VT   LI+  CKN  +  A 
Sbjct: 603 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 662

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI--- 455
           R+   +   G +P+AVTY   M+ + +  +I+    L +EM+ K I P+ V+Y+++I   
Sbjct: 663 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 722

Query: 456 --------------------------------KGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
                                           +G CK  +L EA  L E M   GV PD 
Sbjct: 723 CKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 782

Query: 484 I 484
           +
Sbjct: 783 L 783



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 195/413 (47%), Gaps = 6/413 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T +I+I GLCQ  R+ +A     +   +   PS+V+ ++++  +CK G       L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+K G  PD   Y +L+ GL   G M  A+ F+  M    +  + + ++ L  G+  L
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLIC------GYCQIGNVEEGLKLREVMLSQGFK 235
           ++   A KV + + I G  PD+ T+T ++        +C+      GL+L ++M      
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKIS 569

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            ++   +V++  + K  RI++A      +    ++PD+VTY+ +I G C   ++ +A ++
Sbjct: 570 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 629

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +  +      PN+     ++  LC+   +  A   F  +       + V Y  ++D + K
Sbjct: 630 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 689

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
             +I  + +L+ ++ EK ISPSIV+++ +I G CK G+V +A  +        L P  V 
Sbjct: 690 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 749

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           Y   +  YC+ G +     L + M    + P  +    + +    +W + + V
Sbjct: 750 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGV 802



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 109/478 (22%), Positives = 184/478 (38%), Gaps = 111/478 (23%)

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYT-VLICGYCQIGNVEEGLKLREVMLS-QGFKLN 237
           L S+ + A K  +   I G DP   T   VLI    + G  +   K+ + M++ +G   N
Sbjct: 79  LESEPNSALKYFRWAEISGKDPSFYTIAHVLI----RNGMFDVADKVFDEMITNRGKDFN 134

Query: 238 VIAY-----------SVLLSSMCKSGRIDEALGLLYEMEAVGLK-PDLVTYSILIRGLCK 285
           V+               L+   C+ G +D+AL +      +G+  P    Y +L   L  
Sbjct: 135 VLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIG 193

Query: 286 QDKVHKAIQLYNEMCSKRISPNSF-AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
            D+V      ++++C   I P+   AHG +L  L  K                       
Sbjct: 194 SDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK----------------------- 230

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
                       G + +A+  +R ++E+     IV+ N ++ G   + ++  A RLL  +
Sbjct: 231 ------------GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLV 277

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G  P+ VT+ T                                   +I G CK+ ++
Sbjct: 278 LDCGPAPNVVTFCT-----------------------------------LINGFCKRGEM 302

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
             A  L + M   G+ PD I Y+T+I  + K   L    +L +Q     ++     ++  
Sbjct: 303 DRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSST 362

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           ID    +GDL  A  +   +    IS   V YT +IK  C +G +++A   + Q++++G 
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           E SI  Y+                     ++  F + G+L S F L   MIK G  PD
Sbjct: 423 EPSIVTYSS--------------------LIDGFCKCGNLRSGFALYEDMIKMGYPPD 460


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 157/604 (25%), Positives = 290/604 (48%), Gaps = 23/604 (3%)

Query: 2    LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVS 57
            L   Y+  GM+  A  +  +++E    +   T+ + L  L      WD    LYD++   
Sbjct: 913  LVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGK 972

Query: 58   ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            ++  + Y+  +++ GLC + R+++ +  ++   G    P VV  N ++  YC+ G  ++ 
Sbjct: 973  DSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRG--DMG 1030

Query: 118  KGLFCL--MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            +GL  L  M   G  P   +Y  LI+ L   G +E+      +M + G  P+   Y+ + 
Sbjct: 1031 RGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVI 1090

Query: 176  KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                     + A  +++++   G DPDI+T+  LI G C  G+V +        + +   
Sbjct: 1091 DALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELN 1150

Query: 236  LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
             N ++Y+ L+   C  G +  A  LL EM   G  PD+VT+  LI GL    KV +A+ +
Sbjct: 1151 PNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIV 1210

Query: 296  YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
              +M  +++ P+   +  ++ GLC+K M+  A+   + ++  N   D  +Y  +IDG+++
Sbjct: 1211 REKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIR 1270

Query: 356  LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
              N+G+A +++  +  K + P IV+ N++I G+C+ G +++A   +  ++  G  P   T
Sbjct: 1271 SENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFT 1330

Query: 416  YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
            YTT ++ Y ++GN+   L  L +M  +   P  VTY+ +I G CK      A  L  +M 
Sbjct: 1331 YTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQ 1390

Query: 476  VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL------- 528
               ++P+ +TY  +I S  K   + +A      M L++  P   T + L++GL       
Sbjct: 1391 AEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCV 1450

Query: 529  -----CVNGDLKNADCLLVSLQEHNISL---TKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
                 C   ++   D LLV  ++    +      AY  II + C    + +A+ F  +M 
Sbjct: 1451 INSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMA 1510

Query: 581  EKGF 584
            +KG+
Sbjct: 1511 KKGY 1514



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 224/466 (48%), Gaps = 1/466 (0%)

Query: 128  GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG-RHGVEPDAITYSILAKGFHLLSQISG 186
            G  P       L+     AG + +A E    +  ++G  P+    + L K      +   
Sbjct: 902  GAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDD 961

Query: 187  AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
            A K+  ++L K S  D  +  VL+ G C    VEEGLKL E     G   +V+ Y+VL+ 
Sbjct: 962  ARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLID 1021

Query: 247  SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
              C+ G +   L LL EME  G  P LVTY  LI  L K+  + K   L+ EM  +  SP
Sbjct: 1022 GYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSP 1081

Query: 307  NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
            N   + +++  LC     T+A +    +  S C  D++ +N +I G    G++ +A    
Sbjct: 1082 NVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 1141

Query: 367  RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            R+ I + ++P+ +++  LI+GFC  G++  A  LL  +   G  P  VT+   ++     
Sbjct: 1142 REAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVA 1201

Query: 427  GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
            G +   L + ++M  + + P    Y V+I GLCK+  L  A  +LE+M    V PD+  Y
Sbjct: 1202 GKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVY 1261

Query: 487  NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
             T+I  F + ++L  A ++   M    + P   + N +I G C  G +  A   + ++++
Sbjct: 1262 ATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRK 1321

Query: 547  HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
                  +  YTT+I  +  +G+++ A+ + C M+++  + ++  Y+
Sbjct: 1322 VGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYS 1367



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/532 (25%), Positives = 241/532 (45%), Gaps = 38/532 (7%)

Query: 86   LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK--YGLHPDAFSYNILIHGL 143
            LQ  +     P+   L A+++ Y   G    A  + C  ++  YG  P+    N L+  L
Sbjct: 895  LQSMSLAGAAPTRACLGALVAAYADAGMLGKATEM-CERVREQYGSLPEVTHCNRLLKLL 953

Query: 144  CIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
                  ++A +  ++M       D  +  +L +G  L  ++    K+I+     G  P +
Sbjct: 954  VEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHV 1013

Query: 204  VTYTVLICGYCQIGNVEEGL-----------------------------KLREV------ 228
            V Y VLI GYC+ G++  GL                              L ++      
Sbjct: 1014 VFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLE 1073

Query: 229  MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
            M  +GF  NV  Y+ ++ ++C      +A+ +L +M A G  PD++T++ LI GLC +  
Sbjct: 1074 MRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGH 1133

Query: 289  VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
            V KA     E   + ++PN  ++  ++ G C +  +  A      ++      DVV +  
Sbjct: 1134 VRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGA 1193

Query: 349  MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
            +I G V  G + EA+ +  ++ E+++ P +  +N LI G CK   +  A+ +L+ +    
Sbjct: 1194 LIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKN 1253

Query: 409  LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
            ++P    Y T ++ +    N+     + + ME K + P  V+   +IKG C+   + EA+
Sbjct: 1254 VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAI 1313

Query: 469  QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
              + +M  +G  PD+ TY T+I  + K  +L  A + L  M     +P   TY+ LI+G 
Sbjct: 1314 LCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGY 1373

Query: 529  CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
            C  GD  +A+ L  ++Q   +S   V YT +I +   +  V +A  +F  M+
Sbjct: 1374 CKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETML 1425



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 217/480 (45%), Gaps = 50/480 (10%)

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T   +I+ L ++  L+       E   + F P+V   N+++   C    A  A  +   M
Sbjct: 1050 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQM 1109

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
               G  PD  ++N LI GLC  G + +A  F  +  R  + P+ ++Y+ L  GF +  ++
Sbjct: 1110 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 1169

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
              A  ++ +++ +G  PD+VT+  LI G    G V E L +RE M  +    +V  Y+VL
Sbjct: 1170 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 1229

Query: 245  LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
            +S +CK   +  A  +L EM    ++PD   Y+ LI G  + + +  A +++  M  K +
Sbjct: 1230 ISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGV 1289

Query: 305  SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             P+  +  A++ G C+  M++EA +   ++    CI D   Y  +I GY K GN+  A++
Sbjct: 1290 CPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALR 1349

Query: 365  LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
                +I+++  P++VT++SLI G+CK G    A  L   ++   L P+ VTYT  + +  
Sbjct: 1350 WLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLF 1409

Query: 425  EEGNIQR--------------------------------------------------LLA 434
            ++  + R                                                  LL 
Sbjct: 1410 KKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLV 1469

Query: 435  LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
            + +++      P +  Y  +I  LC+   L+EA+     M   G  P+ IT+ +++  FC
Sbjct: 1470 VFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFC 1529



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 195/469 (41%), Gaps = 88/469 (18%)

Query: 21   KMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
            +M++     ++Q YNS+   L N R       +   +  S    ++ T + +I GLC + 
Sbjct: 1073 EMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEG 1132

Query: 78   RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
             ++ A  FL+E   +E  P+ +S   ++  +C  G   VA  L   M+  G  PD  ++ 
Sbjct: 1133 HVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFG 1192

Query: 138  ILIHGLCIAGSMEEAL-----------------------------------EFTNDMGRH 162
             LIHGL +AG + EAL                                       +M   
Sbjct: 1193 ALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEK 1252

Query: 163  GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
             V+PD   Y+ L  GF     +  A K+ + +  KG  PDIV+   +I GYCQ G + E 
Sbjct: 1253 NVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEA 1312

Query: 223  LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
            +     M   G   +   Y+ ++S   K G ++ AL  L +M     KP++VTYS LI G
Sbjct: 1313 ILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLING 1372

Query: 283  LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC-IQ 341
             CK      A  L+  M ++ +SPN   +  ++  L +K+ +  A +YF+++++++C   
Sbjct: 1373 YCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPN 1432

Query: 342  DVVL-------------------------------------------------YNIMIDG 352
            DV L                                                 YN +I  
Sbjct: 1433 DVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFS 1492

Query: 353  YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
              +   + EA+    ++ +K   P+ +TF SL+YGFC  GK  + R +L
Sbjct: 1493 LCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTIL 1541



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 167/393 (42%), Gaps = 50/393 (12%)

Query: 265  EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
            E  G  P++   + L++ L +Q +   A +LY+EM  K    ++++   ++ GLC +  +
Sbjct: 935  EQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRV 994

Query: 325  TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
             E     ++   + CI                                   P +V +N L
Sbjct: 995  EEGLKLIEARWGAGCI-----------------------------------PHVVFYNVL 1019

Query: 385  IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
            I G+C+ G +     LL  ++ +G  P+ VTY + +N   ++G+++++ +L  EM  +  
Sbjct: 1020 IDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGF 1079

Query: 445  GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
             P    Y  VI  LC      +A+ +L+ M+  G  PD IT+NT+I   C    +RKA  
Sbjct: 1080 SPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEH 1139

Query: 505  LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
             L +     L P   +Y  LI G C+ G+L  A  LLV +     +   V +  +I    
Sbjct: 1140 FLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLV 1199

Query: 565  AEGDVHKAMTFFCQMVEKGF--EISIRDYTKSFFCM-------------MLSNGFPPDQE 609
              G V +A+    +M E+    +++I +   S  C              ML     PD+ 
Sbjct: 1200 VAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEF 1259

Query: 610  ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            +   ++  F +  +LG   ++   M   G+ PD
Sbjct: 1260 VYATLIDGFIRSENLGDARKIFEFMEHKGVCPD 1292



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 19/204 (9%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRN 62
            Y++ G ++ A+  +  M +   K ++ TY+SL+        TD    L+ +++      N
Sbjct: 1338 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPN 1397

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLN------------AIMSRYCK 110
            V T +I+I  L ++ ++  A L+ +        P+ V+L+             I S  C 
Sbjct: 1398 VVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCN 1457

Query: 111  LGFAEVAKGLFCLMLKYGLH---PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
                     L  +  K       P   +YN +I  LC    + EAL+F N M + G  P+
Sbjct: 1458 TSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPN 1517

Query: 168  AITYSILAKGFHLLSQISGAWKVI 191
             IT+  L  GF  + + S  W+ I
Sbjct: 1518 PITFLSLLYGFCSVGK-SVNWRTI 1540


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 157/595 (26%), Positives = 263/595 (44%), Gaps = 73/595 (12%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQE--------------------------TAGKEFGPS 97
           YT  ++IDGLC+  RL+DA   L E                           A K     
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337

Query: 98  VVSLNAIMSRY---------CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
           +VS    +  Y          K G  E AK LF  M+  GL P A +Y  LI G C   +
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           + +  E   +M +  +     TY  + KG      + GA+ ++++++  G  P++V YT 
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI  + Q     + +++ + M  QG   ++  Y+ L+  + K+ R+DEA   L EM   G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           LKP+  TY   I G  +  +   A +   EM    + PN      ++   C+KE + EA 
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEAC 577

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             + S++    + D   Y ++++G  K   + +A +++R++  K I+P + ++  LI GF
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            K G +  A  + D +   GL P+ + Y   +  +C  G I++   LL EM  K + P  
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF----- 503
           VTY  +I G CK   L EA +L ++M + G+ PD   Y T++   C+  D+ +A      
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757

Query: 504 -----------------------------QLLNQMWLHNLE----PTSATYNILIDGLCV 530
                                        ++LN++   + +    P   TYNI+ID LC 
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            G+L+ A  L   +Q  N+  T + YT+++  +   G   +    F + +  G E
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 159/611 (26%), Positives = 278/611 (45%), Gaps = 56/611 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y   G + +AVFV +    L+L   +     LL  L      D+ WD+Y  +       +
Sbjct: 161 YIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFD 220

Query: 63  VYTNSIVIDGLCQQSRLQ--DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           V T  ++I   C+   +Q    +LF  E   KEF  + ++++         G  ++ + +
Sbjct: 221 VKTYHMLIIAHCRAGNVQLGKDVLFKTE---KEFRTATLNVD---------GALKLKESM 268

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
            C     GL P  ++Y++LI GLC    +E+A     +M   GV  D  TYS+L  G   
Sbjct: 269 IC----KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324

Query: 181 LSQISGAWKVIQKLLIKGSD-----------------------------------PDIVT 205
                 A  ++ +++  G +                                   P    
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y  LI GYC+  NV +G +L   M  +   ++   Y  ++  MC SG +D A  ++ EM 
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
           A G +P++V Y+ LI+   +  +   A+++  EM  + I+P+ F + ++++GL + + + 
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EAR +   ++ +    +   Y   I GY++      A +  +++ E  + P+ V    LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
             +CK  KV +A     ++   G+   A TYT  MN   +   +     + +EM  K I 
Sbjct: 565 NEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P   +Y V+I G  K   +Q+A  + ++M   G+TP+ I YN ++  FC+  ++ KA +L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           L++M +  L P + TY  +IDG C +GDL  A  L   ++   +      YTT++   C 
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744

Query: 566 EGDVHKAMTFF 576
             DV +A+T F
Sbjct: 745 LNDVERAITIF 755



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 144/577 (24%), Positives = 262/577 (45%), Gaps = 48/577 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           Y R   V     ++ +MK+ ++ +S  TY +++  +  +   D  +++  ++  S    N
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V   + +I    Q SR  DA+  L+E   +   P +   N+++    K    + A+    
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP---------------- 166
            M++ GL P+AF+Y   I G   A     A ++  +M   GV P                
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKE 571

Query: 167 -------------------DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
                              DA TY++L  G     ++  A ++ +++  KG  PD+ +Y 
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           VLI G+ ++GN+++   + + M+ +G   NVI Y++LL   C+SG I++A  LL EM   
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL P+ VTY  +I G CK   + +A +L++EM  K + P+SF +  ++ G C    +  A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS----PSIVTFNS 383
              F +     C      +N +I+   K G      ++  +L++        P+ VT+N 
Sbjct: 752 ITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           +I   CK G +  A+ L   ++   L P+ +TYT+ +N Y + G    +  +  E     
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI-----TYNTIIRSFCKCKD 498
           I P H+ Y+V+I    K+    +A+ L++ M+      D       T   ++  F K  +
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
           +  A +++  M      P SAT   LI+  C++ + +
Sbjct: 931 MEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 155/593 (26%), Positives = 267/593 (45%), Gaps = 96/593 (16%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSV----VSLNAIMSRYCKLG-FAEVAKGLFC 122
           I+ DG   +  +++A+     + G E  P +    V L+A++ R+ +L  F +V KG   
Sbjct: 156 ILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL-RWNRLDLFWDVYKG--- 211

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M++  +  D  +Y++LI   C AG+++        +G+     D +  +   K F   +
Sbjct: 212 -MVERNVVFDVKTYHMLIIAHCRAGNVQ--------LGK-----DVLFKT--EKEFRTAT 255

Query: 183 -QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             + GA K+ + ++ KG  P   TY VLI G C+I  +E+   L   M S G  L+   Y
Sbjct: 256 LNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY 315

Query: 242 SVLLSSMCKSGRIDEALGLLYEME-----------------------------------A 266
           S+L+  + K    D A GL++EM                                    A
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA 375

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            GL P    Y+ LI G C++  V +  +L  EM  + I  + + +G ++ G+C    +  
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A      +I S C  +VV+Y  +I  +++    G+A+++ +++ E+ I+P I  +NSLI 
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G  K  ++ +AR  L  +  +GL+P+A TY  F++ Y E          ++EM    + P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555

Query: 447 THV-----------------------------------TYTVVIKGLCKQWKLQEAVQLL 471
             V                                   TYTV++ GL K  K+ +A ++ 
Sbjct: 556 NKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            +M   G+ PD  +Y  +I  F K  +++KA  + ++M    L P    YN+L+ G C +
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           G+++ A  LL  +    +    V Y TII  +C  GD+ +A   F +M  KG 
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 135/587 (22%), Positives = 237/587 (40%), Gaps = 89/587 (15%)

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D+FS+  L   LC  GS E+AL              ++   ++ + + +    S   +  
Sbjct: 98  DSFSF--LALDLCNFGSFEKAL--------------SVVERMIERNWPVAEVWSSIVRCS 141

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEE---------GLKL----------------- 225
           Q+ +  G   D V + +L  GY   G +EE         GL+L                 
Sbjct: 142 QEFV--GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRW 199

Query: 226 ---------REVMLSQGFKLNVIAYSVLLSSMCKSG---------------------RID 255
                     + M+ +    +V  Y +L+ + C++G                      +D
Sbjct: 200 NRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVD 259

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
            AL L   M   GL P   TY +LI GLCK  ++  A  L  EM S  +S ++  +  ++
Sbjct: 260 GALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            GL +      A+     ++         +Y+  I    K G + +A  L+  +I   + 
Sbjct: 320 DGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI 379

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P    + SLI G+C+   V     LL  +K   +  S  TY T +   C  G++     +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           ++EM      P  V YT +IK   +  +  +A+++L++M   G+ PD   YN++I    K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
            K + +A   L +M  + L+P + TY   I G     +  +AD  +  ++E  +   KV 
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMML 600
            T +I  +C +  V +A + +  MV++G     + YT               +  F  M 
Sbjct: 560 CTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             G  PD     V++  F + G++     +   M++ GL P+  + N
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 110/530 (20%), Positives = 201/530 (37%), Gaps = 128/530 (24%)

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG----LKPDLVTYSILIR 281
           R+ ++S    + +    VL  S+ +S R+D+   LL     V      +  L ++S L  
Sbjct: 48  RDTLVSSNLSIEINPEVVL--SVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLAL 105

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
            LC      KA+ +   M  +R  P +    +I+   C +E + ++              
Sbjct: 106 DLCNFGSFEKALSVVERMI-ERNWPVAEVWSSIVR--CSQEFVGKS-------------D 149

Query: 342 DVVLYNIMIDGYVKLGNIGEAV-----------------------------------QLY 366
           D VL+ I+ DGY+  G I EAV                                    +Y
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVA---------------------DARRLLDTIK 405
           + ++E+ +   + T++ LI   C+ G V                       A +L +++ 
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL------- 458
             GL P   TY   ++  C+   ++   +LL EM++  +   + TY+++I GL       
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329

Query: 459 ----------------------------CKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
                                        K+  +++A  L + M   G+ P    Y ++I
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             +C+ K++R+ ++LL +M   N+  +  TY  ++ G+C +GDL  A  ++  +      
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI---------------RDYTKSF 595
              V YTT+IK          AM    +M E+G    I                D  +SF
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
              M+ NG  P+       +  + +  +  S  +    M + G+LP+K L
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 139/297 (46%), Gaps = 15/297 (5%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIM--WDLYDDIKVS 57
           ML   + R+G +  A  ++ +M    L  +  TY +++    +  D+   + L+D++K+ 
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               + +  + ++DG C+ + ++ AI     T  K    S    NA+++   K G  E+ 
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELK 785

Query: 118 KGLFCLML-----KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
             +   ++     ++G  P+  +YNI+I  LC  G++E A E  + M    + P  ITY+
Sbjct: 786 TEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  G+  + + +  + V  + +  G +PD + Y+V+I  + + G   + L L + M ++
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904

Query: 233 -----GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
                G KL++     LLS   K G ++ A  ++  M  +   PD  T   LI   C
Sbjct: 905 NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 250/496 (50%), Gaps = 12/496 (2%)

Query: 93  EFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
           EFG  P+V   N ++         ++   L+  M K GL P+ F+YNIL+  LC    ++
Sbjct: 137 EFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVD 196

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            A +   +M   G  PDA+TY+ +        +I  A ++  +       P +  Y  LI
Sbjct: 197 AAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----KPSVPVYNALI 251

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C+ G +E  +KL   M+  G   NV++YS +++S+C SG ++ A  L  +M   G  
Sbjct: 252 DGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCD 311

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
            ++ T++ LI+G   + K+++A+ L+  M      PN  A+  ++ GLC    + EA   
Sbjct: 312 ANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV 371

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            D +  S C+ +V  Y+I+IDG+ K G++  A + + ++I     P++VT+  ++   CK
Sbjct: 372 CDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCK 431

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           N     A  L++ + L G  P+ +T+ TF+   C  G ++  + LL+ M+     P   T
Sbjct: 432 NSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITT 491

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  ++  L +  K +EA  L +++    + P+ +TYNT++  F +   + +A QL  +  
Sbjct: 492 YNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKAL 551

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCL---LVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +    P S TYN +I   C  G +K A  L   + S++E +  +  + YT++I   C   
Sbjct: 552 VRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDI--ITYTSLIWGACNWM 609

Query: 568 DVHKAMTFFCQMVEKG 583
           ++ +AM F  + + +G
Sbjct: 610 NIEEAMAFLDKAINQG 625



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 256/524 (48%), Gaps = 9/524 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPRN 62
           Y R G    A+ +  ++ E   K +++ YN LL  L   +   ++  LY ++K      N
Sbjct: 119 YKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPN 178

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+T +I++  LC+  R+  A     E + K   P  V+   ++S  CK G  + A+    
Sbjct: 179 VFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARE--- 235

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             L     P    YN LI G+C  G +E A++   +M  +GV+P+ ++YS +     +  
Sbjct: 236 --LAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSG 293

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A+ +  ++ ++G D +I T+T LI G    G + E L L ++M+  G + NV+AY+
Sbjct: 294 NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYN 353

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +C +G ++EAL +  +M+  G  P++ TYSILI G  K   +  A + +N M S 
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH 413

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              PN   +  ++  LC+  M  +A    + + +  C  + + +N  I G    G +  A
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWA 473

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++L  ++      P+I T+N L+    +  K  +A  L   I+   L+P+ VTY T +  
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG 533

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-VTP 481
           +   G +   L L  +   +   P  +TY  +I   CKQ K++ A QL+E +  +    P
Sbjct: 534 FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHP 593

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           D ITY ++I   C   ++ +A   L++     + P  AT+N L+
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 220/495 (44%), Gaps = 20/495 (4%)

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
           A TY ++ +      ++     ++Q++ + G +     +  +I GY ++G+ E+ LK+  
Sbjct: 74  ASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFY 133

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            +   G K  V  Y+ LL ++    +      L   M+  GL P++ TY+IL++ LCK D
Sbjct: 134 RIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKND 193

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +V  A +L+ EM +K   P++  +  ++  LC+   I +AR        S     V +YN
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPS-----VPVYN 248

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +IDG  K G I  A++L  ++++  + P++V+++ +I   C +G V  A  L   + L 
Sbjct: 249 ALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G + +  T+T  +      G +   L L + M      P  V Y  +I GLC    L+EA
Sbjct: 309 GCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           +Q+ + M   G  P+  TY+ +I  F K  DL  A +  N+M  H   P   TY  ++D 
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC N     A+ L+  +     +   + + T IK  C  G V  AM    +M   G   +
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488

Query: 588 IRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
           I  Y +                 F  + +    P+      +L  F + G +G   +L  
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFG 548

Query: 633 VMIKSGLLPDKFLIN 647
             +  G  PD    N
Sbjct: 549 KALVRGTAPDSITYN 563



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 163/399 (40%), Gaps = 107/399 (26%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC------ 122
           +IDG+C++ R++ AI  L E       P+VVS + I++  C  G  E+A  LF       
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309

Query: 123 -----------------------------LMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
                                        LM++ G  P+  +YN LIHGLC  GS+EEAL
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA---WK--------------------- 189
           +  + M R G  P+  TYSIL  GF     + GA   W                      
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429

Query: 190 -----------VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                      +++K+ ++G  P+ +T+   I G C  G VE  +KL E M   G   N+
Sbjct: 430 CKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNI 489

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY---------------------- 276
             Y+ LL ++ +  + +EA GL  E+EA  L+P+LVTY                      
Sbjct: 490 TTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGK 549

Query: 277 -------------SILIRGLCKQDKVHKAIQLYNEMCS-KRISPNSFAHGAILLGLCEKE 322
                        + +I   CKQ KV  A QL   + S K   P+   + +++ G C   
Sbjct: 550 ALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWM 609

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYV-KLGNIG 360
            I EA  + D  I      +   +N ++  +   LG++G
Sbjct: 610 NIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMG 648


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 246/487 (50%), Gaps = 12/487 (2%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P    +N ++            +  +  +    ++PD  T +IL   F  L QI+ A+ V
Sbjct: 61  PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSV 120

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           + K+L  G  PD VT T LI G C  G V++ L   + +L+QGF+L+ ++Y  L++ +CK
Sbjct: 121 LSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCK 180

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G    A+ LL  ++    +P++V Y+ +I  LCK+  V +A  L++EM  K IS N   
Sbjct: 181 IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVT 240

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + AI+ G C    +TEA  + + +++     DV +YN ++D   K G + EA  +   ++
Sbjct: 241 YSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIV 300

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           +  + P+++T+N+LI G+        A+ + + + L G+ P   +Y   +N  C+   ++
Sbjct: 301 KTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVE 352

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             L L +EM  K + P  VTY  +I GLCK  ++  A  L+++M+  G   + ITYN++I
Sbjct: 353 EALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLI 412

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG-LCVNGDLKNADCLLVSLQEHNI 549
              CK   L KA  L+N+M    ++P   T NIL+ G LC    LKNA  L   L +   
Sbjct: 413 NGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGY 472

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
                 Y  II  HC EG + +A     +M + G   +   + K   C +L  G     E
Sbjct: 473 HPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITF-KIIICALLEKGETDKAE 531

Query: 610 --ICEVM 614
             +CE++
Sbjct: 532 KLLCEMI 538



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 253/501 (50%), Gaps = 10/501 (1%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D ++  +  + +  TP  +  N I +D   +       +   +    K   P   +LN +
Sbjct: 46  DALFQFHRMLCMRHTPPIIQFNKI-LDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNIL 104

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           ++ +C LG   +A  +   +LK+G  PD  +   LI GLC+ G +++AL F + +   G 
Sbjct: 105 INCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGF 164

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
             D ++Y  L  G   + +   A ++++++  + ++P++V Y  +I   C+   V E   
Sbjct: 165 RLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACN 224

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L   M  +G   NV+ YS ++   C  G++ EALG L EM    + PD+  Y+ L+  L 
Sbjct: 225 LFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALH 284

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K+ KV +A  +   +    + PN   +  ++ G         A+  F+++ +     DV 
Sbjct: 285 KEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVTPDVW 336

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            YNIMI+   K+  + EA+ LY+++ +K + P+ VT+NSLI G CK+G+++ A  L+D +
Sbjct: 337 SYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEM 396

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG-LCKQWK 463
              G   + +TY + +N  C+ G + + +AL+ +M+ + I P   T  +++ G LCK  +
Sbjct: 397 HDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKR 456

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           L+ A  L +D+   G  P+  TYN II   CK   L +A+ L ++M      P + T+ I
Sbjct: 457 LKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKI 516

Query: 524 LIDGLCVNGDLKNADCLLVSL 544
           +I  L   G+   A+ LL  +
Sbjct: 517 IICALLEKGETDKAEKLLCEM 537



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 212/416 (50%), Gaps = 9/416 (2%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I GLC + +++ A+ F  +   + F    VS   +++  CK+G    A  L   +
Sbjct: 135 TLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRI 194

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
                 P+   YN +I  LC    + EA    ++M   G+  + +TYS +  GF ++ ++
Sbjct: 195 DGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKL 254

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A   + ++++K  +PD+  Y  L+    + G V+E   +  V++    K NVI Y+ L
Sbjct: 255 TEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTL 314

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +    K   +  A+GL+      G+ PD+ +Y+I+I  LCK  +V +A+ LY EM  K +
Sbjct: 315 IDGYAK--HVFNAVGLM------GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNM 366

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN+  + +++ GLC+   I+ A    D +       +V+ YN +I+G  K G + +A+ 
Sbjct: 367 VPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIA 426

Query: 365 LYRQLIEKRISPSIVTFNSLIYGF-CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           L  ++ ++ I P + T N L++G  CK  ++ +A+ L   +   G  P+  TY   +  +
Sbjct: 427 LINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGH 486

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           C+EG +    AL  +ME     P  +T+ ++I  L ++ +  +A +LL +M   G+
Sbjct: 487 CKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 207/470 (44%), Gaps = 47/470 (10%)

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
           NV++ L     ML       +I ++ +L S  K       + L   +E   ++PD  T +
Sbjct: 43  NVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLN 102

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           ILI   C   +++ A  + +++      P++     ++ GLC K  + +A  + D L+  
Sbjct: 103 ILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQ 162

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
               D V Y  +I+G  K+G    A+QL R++  +   P++V +N++I   CK   V++A
Sbjct: 163 GFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEA 222

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             L   + + G+  + VTY+  ++ +C  G +   L  L EM  KAI P    Y  ++  
Sbjct: 223 CNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDA 282

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF------------------------ 493
           L K+ K++EA  +L  +    + P+ ITYNT+I  +                        
Sbjct: 283 LHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMI 342

Query: 494 ---CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CK K + +A  L  +M   N+ P + TYN LIDGLC +G +  A  L+  + +    
Sbjct: 343 NRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHH 402

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------------------ 592
              + Y ++I   C  G + KA+    +M ++G +  +  YT                  
Sbjct: 403 ANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDM--YTLNILLHGLLCKGKRLKNA 460

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +  F  +L  G+ P+     +++    + G L   + L + M  SG  P+
Sbjct: 461 QGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPN 510



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 141/265 (53%), Gaps = 10/265 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + G V +A  V+A + +  LK ++ TYN+L+           +++ + +     +V++ +
Sbjct: 285 KEGKVKEAKNVLAVIVKTCLKPNVITYNTLI-----DGYAKHVFNAVGLMGVTPDVWSYN 339

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I+I+ LC+  R+++A+   +E   K   P+ V+ N+++   CK G    A  L   M   
Sbjct: 340 IMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDR 399

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL---SQI 184
           G H +  +YN LI+GLC  G +++A+   N M   G++PD  T +IL  G  LL    ++
Sbjct: 400 GHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHG--LLCKGKRL 457

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  + Q LL KG  P++ TY ++I G+C+ G ++E   L+  M   G   N I + ++
Sbjct: 458 KNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKII 517

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGL 269
           + ++ + G  D+A  LL EM A GL
Sbjct: 518 ICALLEKGETDKAEKLLCEMIARGL 542



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 140/317 (44%), Gaps = 63/317 (19%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +L+ ++ V     NV T S +I G C   +L +A+ FL E   K   P V   N ++   
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 109 CKLGFAEVAKGLFCLMLK---------------------------YGLHPDAFSYNILIH 141
            K G  + AK +  +++K                            G+ PD +SYNI+I+
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMIN 343

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
            LC    +EEAL    +M +  + P+ +TY+ L  G     +IS AW +I ++  +G   
Sbjct: 344 RLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHA 403

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVM-------------------------------- 229
           +++TY  LI G C+ G +++ + L   M                                
Sbjct: 404 NVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGL 463

Query: 230 ----LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
               L +G+  NV  Y++++   CK G +DEA  L  +ME  G  P+ +T+ I+I  L +
Sbjct: 464 FQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLE 523

Query: 286 QDKVHKAIQLYNEMCSK 302
           + +  KA +L  EM ++
Sbjct: 524 KGETDKAEKLLCEMIAR 540



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 144/333 (43%), Gaps = 7/333 (2%)

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
           E + +A   F  ++       ++ +N ++D + K+ +    V L R+L  K I P   T 
Sbjct: 42  ENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTL 101

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N LI  FC  G++  A  +L  I   G +P  VT TT +   C +G +++ L    ++  
Sbjct: 102 NILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLA 161

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           +      V+Y  +I G+CK  + + A+QLL  +      P+ + YNTII   CK K + +
Sbjct: 162 QGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSE 221

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A  L ++M +  +     TY+ +I G C+ G L  A   L  +    I+     Y T++ 
Sbjct: 222 ACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVD 281

Query: 562 AHCAEGDVHKAMTFFCQMVEK-------GFEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
           A   EG V +A      +V+         +   I  Y K  F  +   G  PD     +M
Sbjct: 282 ALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIM 341

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +    +   +     L   M +  ++P+    N
Sbjct: 342 INRLCKIKRVEEALNLYKEMHQKNMVPNTVTYN 374


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 168/616 (27%), Positives = 291/616 (47%), Gaps = 40/616 (6%)

Query: 27  LKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY---TNSIVIDGLCQQSRLQDAI 83
            +++   Y+SLL +L   D+ +  Y   +  E    V        +++ LC+    + A 
Sbjct: 156 FRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAE 215

Query: 84  LFLQETAGKEFGPSVVSLNAIMSRYCK-LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
           +F+ +     F        +++  +C+ L   +  K    +  +    P++ SY+ILIHG
Sbjct: 216 MFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHG 275

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           LC  G +EEA    + MG  G +P   TY++L K       I  A+ +  +++ +G  P+
Sbjct: 276 LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPN 335

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           + TYTVLI G C+ G +EE   +   M+      +VI Y+ L++  CK GR+  A  LL 
Sbjct: 336 VHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLT 395

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
            ME    KP++ T++ L+ GLC+  K +KA+ L   M    +SP                
Sbjct: 396 VMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP---------------- 439

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
                              D+V YN++IDG  + G++  A +L   +    I P  +TF 
Sbjct: 440 -------------------DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           ++I  FCK GK   A   L  +   G+    VT TT ++  C+ G  +  L +L+ +   
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            I  T  +  V++  L K  K++E + +L  +  +G+ P  +TY T++    +  D+  +
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGS 600

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
           F++L  M L    P    Y I+I+GLC  G ++ A+ LL ++Q+  +S   V YT ++K 
Sbjct: 601 FRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           +   G + +A+     MVE+G+E++ R Y+      +LS     + E   V  IA  +  
Sbjct: 661 YVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRE-T 719

Query: 623 DLGSVFELAAVMIKSG 638
           D   + EL +V+ + G
Sbjct: 720 DPECINELISVVEQLG 735



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/581 (24%), Positives = 275/581 (47%), Gaps = 43/581 (7%)

Query: 40  NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVV 99
           NLR    ++D+    +V+  P +V + SI+I GLC+  RL++A     +   K   PS  
Sbjct: 245 NLRDALKVFDVMSK-EVTCAPNSV-SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           +   ++   C  G  + A  LF  M+  G  P+  +Y +LI GLC  G +EEA      M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
            +  + P  ITY+ L  G+    ++  A++++  +  +   P++ T+  L+ G C++G  
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            + + L + ML  G   ++++Y+VL+  +C+ G ++ A  LL  M    ++PD +T++ +
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I   CKQ K   A      M  K IS +      ++ G+C+     +A    ++L+    
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           +      N+++D   K   + E + +  ++ +  + PS+VT+ +L+ G  ++G +  + R
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR 602

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           +L+ +KL G  P+   YT  +N  C+ G ++    LL  M+   + P HVTYTV++KG  
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
              KL  A++ +  M   G   +   Y+++++ F           +L+Q  + N E ++ 
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRIYSSLLQGF-----------VLSQKGIDNSEESTV 711

Query: 520 TYNIL---------------------IDGLCV--------NGDLKNADCLLVSLQEHNIS 550
           +   L                     I GLC+         G    ++ L+ ++ E  + 
Sbjct: 712 SDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVF 771

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           L K A   I++++C++    K M     +++ GF  S + +
Sbjct: 772 LEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSF 811



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 216/459 (47%), Gaps = 21/459 (4%)

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A+   +++   G    ++ Y  ++   C+ G  E        +L  GF L+    + LL 
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238

Query: 247 SMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             C+   + +AL +   M + V   P+ V+YSILI GLC+  ++ +A  L ++M  K   
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P++  +  ++  LC++ +I +A   FD +I   C  +V  Y ++IDG  + G I EA  +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
            R++++ RI PS++T+N+LI G+CK+G+V  A  LL  ++    +P+  T+   M   C 
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G   + + LL+ M    + P  V+Y V+I GLC++  +  A +LL  M    + PD +T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           +  II +FCK      A   L  M    +     T   LIDG+C  G  ++A  +L +L 
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
           +  I  T  +   I+        V + +    ++ + G   S+  YT             
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYT------------- 585

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                   ++    + GD+   F +  +M  SG LP+ +
Sbjct: 586 -------TLVDGLIRSGDITGSFRILELMKLSGCLPNVY 617



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/371 (31%), Positives = 176/371 (47%), Gaps = 18/371 (4%)

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL-----YEMEAVGLKPDLVTYSI 278
           +LREV    GF+LN   YS LL S+ K   +D  LG L       MEA G    ++ Y  
Sbjct: 149 ELREVF---GFRLNYPCYSSLLMSLAK---LD--LGFLAYVTYRRMEADGFVVGMIDYRT 200

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS- 337
           ++  LCK      A    +++       +S    ++LLG C    + +A   FD  +MS 
Sbjct: 201 IVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD--VMSK 258

Query: 338 --NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C  + V Y+I+I G  ++G + EA  L  Q+ EK   PS  T+  LI   C  G + 
Sbjct: 259 EVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLID 318

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L D +   G +P+  TYT  ++  C +G I+    + ++M    I P+ +TY  +I
Sbjct: 319 KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALI 378

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G CK  ++  A +LL  M      P+  T+N ++   C+     KA  LL +M  + L 
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   +YN+LIDGLC  G +  A  LL S+   +I    + +T II A C +G    A  F
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498

Query: 576 FCQMVEKGFEI 586
              M+ KG  +
Sbjct: 499 LGLMLRKGISL 509



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 150/347 (43%), Gaps = 30/347 (8%)

Query: 319 CEKEMIT------EARMYFDSLIMSNCIQDVVLYNIMID-GYVKLGNIGEAVQLYRQLIE 371
           CEKEM+       E R  F   +   C   +++    +D G++       A   YR++  
Sbjct: 136 CEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFL-------AYVTYRRMEA 188

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
                 ++ + +++   CKNG    A   +  I   G    +   T+ +  +C   N++ 
Sbjct: 189 DGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRD 248

Query: 432 LLALLQEMETKAI-GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
            L +   M  +    P  V+Y+++I GLC+  +L+EA  L + M   G  P   TY  +I
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
           ++ C    + KAF L ++M     +P   TY +LIDGLC +G ++ A+ +   + +  I 
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SF 595
            + + Y  +I  +C +G V  A      M ++  + ++R + +                 
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              ML NG  PD     V++    + G + + ++L + M    + PD
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 262/527 (49%), Gaps = 9/527 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPRN 62
           Y R G+   A+    ++ E   K S++ YN +L  L   +   ++  +Y+++K      N
Sbjct: 118 YRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELN 177

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT ++++  LC+  R+  A   L E + K   P  VS   ++S  C+LG  E A+ L  
Sbjct: 178 VYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSM 237

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +  +        YN LI+G C    MEE  E  N+M   G++PD ITYS +      + 
Sbjct: 238 RIKSF-----VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMG 292

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A  V+ K+ ++G  P++ T+T L+ GY   G + E L L   M+ +G + N +AY+
Sbjct: 293 NVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYN 352

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +C  G++ EA+ +  +ME  G+ P+  TYS LI G  K   +  A +++N+M + 
Sbjct: 353 TLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITN 412

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              PN   +  ++  LC   M   A    +++   NC  + + +N  I G    G    A
Sbjct: 413 GCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWA 472

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +++  Q+ +   +P++ T+N ++ G     +  +A +++  I+   ++ + VTY T ++ 
Sbjct: 473 MKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSG 532

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT-P 481
           +C  G  +  L +  ++      P  +TY  VI   CKQ +++ A+QL++ +   G   P
Sbjct: 533 FCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYP 592

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           D  TY +++   C    + +A   L++M    + P  AT+N L+ GL
Sbjct: 593 DVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 244/494 (49%), Gaps = 8/494 (1%)

Query: 93  EFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
           EFG  PSV   N ++         ++  G++  M + G+  + ++YN+L+  LC    ++
Sbjct: 136 EFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVD 195

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            A +   +M   G  PDA++Y+ +      L ++  A ++   + IK   P    Y  LI
Sbjct: 196 AARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL--SMRIKSFVP---VYNALI 250

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G+C+   +EE  +L   M  +G   +VI YS +++++ + G ++ AL +L +M   G  
Sbjct: 251 NGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCS 310

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P++ T++ L++G     ++ +A+ L+N M  +   PN+ A+  ++ GLC    + EA   
Sbjct: 311 PNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSV 370

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
              +  +    +   Y+ +IDG+ K G++  A +++ ++I     P++V +  ++   C+
Sbjct: 371 SQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCR 430

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           N     A  L++ +      P+ +T+ TF+   C  G  +  + +L +M      P   T
Sbjct: 431 NSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTT 490

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  V+ GL    + +EA+Q++ ++  + +  + +TYNTI+  FC     + A Q+  ++ 
Sbjct: 491 YNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLL 550

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV-AYTTIIKAHCAEGDV 569
           +   +P S TYN +I   C  G++K A  L+  L +       V  YT+++   C    V
Sbjct: 551 VGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGV 610

Query: 570 HKAMTFFCQMVEKG 583
            +A+    +M+ +G
Sbjct: 611 DEAVVHLDKMINEG 624



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 146/593 (24%), Positives = 279/593 (47%), Gaps = 43/593 (7%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAG-KEFGPSVVSLNAIMSRYCKLGFAEVAKG- 119
           N+   S V++ L  +  +  A+ F +  A    F  + ++   ++ R   LG+     G 
Sbjct: 36  NLLKESEVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKR---LGYERDIDGI 92

Query: 120 --LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L  LM   G+  +   + I+I+    AG  E+AL+    +G  G +P    Y+ +   
Sbjct: 93  QYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDA 152

Query: 178 FHLLSQ-----ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
             LLS+     I+G +  +++    G + ++ TY +L+   C+   V+   KL   M  +
Sbjct: 153 --LLSENKFQMINGIYNNMKR---DGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYK 207

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   + ++Y+ ++SSMC+ G+++EA  L     ++ +K  +  Y+ LI G C++ K+ + 
Sbjct: 208 GCIPDAVSYTTVVSSMCRLGKVEEAREL-----SMRIKSFVPVYNALINGFCREHKMEEV 262

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            +L+NEM  + I P+   +  ++  L E   +  A      + +  C  +V  +  ++ G
Sbjct: 263 FELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKG 322

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           Y   G + EA+ L+ ++I++   P+ V +N+LI+G C  GK+ +A  +   ++ +G+ P+
Sbjct: 323 YFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPN 382

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             TY+T ++ + + G++     +  +M T    P  V YT ++  LC+      A+ L+E
Sbjct: 383 ETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIE 442

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +M      P+ IT+NT I+  C       A ++LNQM  +   P   TYN ++DGL    
Sbjct: 443 NMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAK 502

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             + A  ++  ++E  I    V Y TI+   C  G           M +   +I+ +   
Sbjct: 503 RTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAG-----------MFKGALQIAGK--- 548

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL-LPDKF 644
                 +L  G  PD      ++ A+ + G++ +  +L   + K G   PD F
Sbjct: 549 ------LLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVF 595



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 161/356 (45%), Gaps = 43/356 (12%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDD-IKVSETPR 61
           S  G V  A+ V+AKM       ++ T+ SL+       R  + + DL++  I+    P 
Sbjct: 289 SEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEAL-DLWNRMIQEGSEPN 347

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK----LGFAEVA 117
            V  N++ I GLC   ++ +A+   Q+       P+  + + ++  + K    +G +E+ 
Sbjct: 348 TVAYNTL-IHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIW 406

Query: 118 KGLF---CL-----------------MLKYGLH-----------PDAFSYNILIHGLCIA 146
             +    CL                 M  + LH           P+  ++N  I GLC +
Sbjct: 407 NKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCS 466

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G  E A++  N M ++G  P+  TY+ +  G     +   A +++ ++       ++VTY
Sbjct: 467 GKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTY 526

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             ++ G+C  G  +  L++   +L  G K + I Y+ ++ + CK G +  A+ L+  +  
Sbjct: 527 NTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTK 586

Query: 267 VGLK-PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            G   PD+ TY+ L+ G+C    V +A+   ++M ++ I PN     A++ GL  K
Sbjct: 587 KGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSK 642



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 16/200 (8%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYT 65
           +G    A+ V+ +M++     ++ TYN +L   +N + T     +  +I+  E   N+ T
Sbjct: 466 SGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVT 525

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEF----GPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            + ++ G C     + A+    + AGK       P  ++ N ++  YCK G  + A  L 
Sbjct: 526 YNTILSGFCHAGMFKGAL----QIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLV 581

Query: 122 CLMLKYGL-HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             + K G  +PD F+Y  L+ G+C    ++EA+   + M   G+ P+  T++ L +G  L
Sbjct: 582 DRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRG--L 639

Query: 181 LSQIS--GAWKVIQKLLIKG 198
            S++   G   ++  +L  G
Sbjct: 640 FSKLGHLGPIHIVDNILANG 659


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 238/466 (51%), Gaps = 12/466 (2%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  +L       AF +N ++  L  +      L  +  M   G+ P+ +T++IL  
Sbjct: 52  AVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILIN 111

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F  L  I  A+ V+ K+L  G +PDI+T    I G+C  G + + L   + +++ GF L
Sbjct: 112 CFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 171

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + ++Y  L++ +CK G    AL LL  ++   ++ + V Y+ +I G+ K   V+ A  LY
Sbjct: 172 DQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLY 231

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           +EM +KRISP+   + A++ G      + +A   F+ +I+ N   DV  +NI++DG+ K 
Sbjct: 232 SEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKE 291

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G + +A  +   ++ + I P++ TFN+L+ GFCK+ K+ + + +   +   G++P+ VTY
Sbjct: 292 GRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTY 351

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            + M+ YC    + +   +   M  + +     +Y ++I G CK  K+ +A++L  +M+ 
Sbjct: 352 CSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHH 411

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             + PD +TYN++I   CK   +  AFQL+N+M      P   TYN +++          
Sbjct: 412 KHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNA--------- 462

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
              LL  L++  I       T +IK  C  G +  A   F  ++ K
Sbjct: 463 ---LLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 234/446 (52%), Gaps = 15/446 (3%)

Query: 34  YNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA 90
           +N +L +L   +H   +  L   ++      N  T +I+I+  CQ   +  A   L +  
Sbjct: 71  FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
              + P +++LN  +  +C  G    A      ++  G H D  SY  LI+GLC  G   
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            AL+    +    V+ +A+ Y+ +  G      ++ A+ +  +++ K   PD+VTY+ LI
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G+  +G +++ + L   M+ +  K +V  +++L+   CK GR+ +A  +L  M    +K
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIK 310

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P++ T++ L+ G CK  K+ +   ++  M  + I PN   + +++ G C  + + +A+  
Sbjct: 311 PNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKI 370

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           F+++       +V  YNIMI+G+ K+  + +A++L+ ++  K I P +VT+NSLI G CK
Sbjct: 371 FNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCK 430

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           +GK++ A +L++ +   G  P+ +TY + +N            ALL +++ + I P   T
Sbjct: 431 SGKISYAFQLVNEMHDRGQPPNIITYNSILN------------ALLTKLKDQGIQPNMHT 478

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T++IKGLC+  KL+ A ++ ED+ V
Sbjct: 479 DTILIKGLCQSGKLEAARKVFEDLLV 504



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 233/473 (49%), Gaps = 9/473 (1%)

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           ++ + I YS ++  FH  + + GA  +   LL +        +  ++    +  +    L
Sbjct: 30  LQKNFIPYSSISTTFHS-NDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVL 88

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
            L + M  +G   N + +++L++  C+ G I  A  +L ++  +G +PD++T +  I+G 
Sbjct: 89  SLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGF 148

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-D 342
           C + ++H+A+  ++++ +     +  ++G ++ GLC K   T A +     +    +Q +
Sbjct: 149 CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLC-KVGETRAALQLLRRVDGKLVQLN 207

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
            V+YN +IDG  K  ++ +A  LY +++ KRISP +VT+++LI GF   GK+ DA  L +
Sbjct: 208 AVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFN 267

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            + L  ++P   T+   ++ +C+EG +++   +L  M  + I P   T+  ++ G CK  
Sbjct: 268 KMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDR 327

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           K++E   +   M   G+ P+ +TY +++  +C  K + KA ++ N M    +     +YN
Sbjct: 328 KMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYN 387

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           I+I+G C    +  A  L + +   +I    V Y ++I   C  G +  A     +M ++
Sbjct: 388 IMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDR 447

Query: 583 GFEISIRDYT---KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS---VFE 629
           G   +I  Y     +    +   G  P+     +++    Q G L +   VFE
Sbjct: 448 GQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFE 500



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 142/293 (48%), Gaps = 44/293 (15%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIV 69
           G + DA+ +  KM   ++K  + T+N                                I+
Sbjct: 257 GKLKDAIDLFNKMILENIKPDVYTFN--------------------------------IL 284

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           +DG C++ RL+ A   L     ++  P+V + N ++  +CK    +  K +F +M+K G+
Sbjct: 285 VDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGI 344

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P+  +Y  L+ G C+   + +A +  N M + GV  +  +Y+I+  GF  + ++  A K
Sbjct: 345 KPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMK 404

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           +  ++  K   PD+VTY  LI G C+ G +    +L   M  +G   N+I Y+ +L++  
Sbjct: 405 LFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNA-- 462

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
                     LL +++  G++P++ T +ILI+GLC+  K+  A +++ ++  K
Sbjct: 463 ----------LLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 113/274 (41%), Gaps = 21/274 (7%)

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           +  + + ++S+   F  N  V  A  L +++       +A  +   + +  +  +   +L
Sbjct: 30  LQKNFIPYSSISTTFHSND-VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVL 88

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           +L Q+ME + I P  VT+ ++I   C+   +  A  +L  +  +G  PD IT NT I+ F
Sbjct: 89  SLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGF 148

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C    + +A    +++          +Y  LI+GLC  G+ + A  LL  +    + L  
Sbjct: 149 CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNA 208

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
           V Y T+I     +  V+ A   + +MV K   IS                  PD      
Sbjct: 209 VMYNTVIDGMSKDKHVNDAFDLYSEMVAK--RIS------------------PDVVTYSA 248

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           ++  F   G L    +L   MI   + PD +  N
Sbjct: 249 LIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFN 282


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 153/496 (30%), Positives = 238/496 (47%), Gaps = 22/496 (4%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           K +  SV + N  +    K    ++A   F  M + G  PD F+Y+I++ GLC AG +++
Sbjct: 32  KGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDK 91

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTYTVLI 210
           A E    +   GV+ + ITYS++  G    S++  A ++ + +   G   PD+VT+  L+
Sbjct: 92  AKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLL 151

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C    + E   L E M   G + NVI+YS LL  +CK+GR+DEA  L  EM      
Sbjct: 152 KGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCV 211

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PDLV Y+  + GLCK ++V +A     +M +K    ++ A   ++  LC+K    EA+  
Sbjct: 212 PDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ-- 269

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
                           N MI+   + G + EA + + ++I +   PS   FN+LI+  CK
Sbjct: 270 ----------------NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCK 313

Query: 391 NGKVADARRL---LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           + ++ D   L   + ++K     P+  TY   ++  C+   +     L+ EM    + P 
Sbjct: 314 SKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPD 373

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            VTY+ ++ GLCK  KL  A  LLE+M   GV PD  T  +I+ +  K   +  A   L 
Sbjct: 374 VVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLE 433

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M      P   TYN L+DGLC  G +  A   L  +     +    +YT II A C  G
Sbjct: 434 TMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSG 493

Query: 568 DVHKAMTFFCQMVEKG 583
               A   F +MV++G
Sbjct: 494 QAAGAHAIFQEMVKRG 509



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 239/519 (46%), Gaps = 59/519 (11%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNA 103
           D   +L   ++ S    NV T S+VIDG C+ SR+ DA+ +F   +AG    P VV+ N+
Sbjct: 90  DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNS 149

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           ++   C       A  LF  M K G  P+  SY+ L+ GLC AG ++EA     +M    
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
             PD + Y+    G    ++++ A    +K++ KGS  D V ++ +I   C+ G+ EE  
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269

Query: 224 K------LREVMLSQGFKL----------------------------------------- 236
                   R  ML +  K                                          
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329

Query: 237 --------NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
                   N+  Y++++ ++CK+ ++DEA  L+ EM   GL PD+VTYS L+ GLCK  K
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + +A  L  EM  + + P+SF   +IL  L +   +  A  + +++       D+V YN 
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           ++DG  K G I EA+    +++  + +P + ++  +I   C++G+ A A  +   +   G
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P  V Y + ++     G     L LL+   T    P  V + +V+ GLCK  K ++A 
Sbjct: 510 VLPDTVLYHSLLDGLARNGLEDLALELLK---TSLCKPDFVMHKMVVDGLCKAGKAEDAC 566

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
           +++E M   G   D  TY  ++R   K   + KA QL++
Sbjct: 567 EVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVD 605



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 240/509 (47%), Gaps = 42/509 (8%)

Query: 159 MGRH-GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           +GR  G +    TY+         +    A++  Q++  +G  PD  TY++++ G C+ G
Sbjct: 28  LGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAG 87

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG-LKPDLVTY 276
            +++  +L   +   G KLNVI YSV++   CK+ R+D+AL +   M A G   PD+VT+
Sbjct: 88  ELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTF 147

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + L++GLC  +++ +A  L+  M      PN  ++  +L GLC+   + EA   ++ ++ 
Sbjct: 148 NSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVE 207

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
            +C+ D+V Y   + G  K   + EA    R+++ K      V F+++I   CK G   +
Sbjct: 208 KSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEE 267

Query: 397 AR-RLLDTIKLHGL----------------EPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           A+ ++++ +   G+                 PSA  + T ++A C+   +   + L Q M
Sbjct: 268 AQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRM 327

Query: 440 ETKA---IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           ++       P   TY +++  LCK  +L EA +L+ +M   G++PD +TY+ ++   CK 
Sbjct: 328 KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKL 387

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
             L +A  LL +M    + P S T   +++ L   G +  A   L +++    +   V Y
Sbjct: 388 GKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTY 447

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
            T++   C  G + +A+TF  +MV       +  YT                    +++ 
Sbjct: 448 NTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYT--------------------IIIT 487

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           A  + G       +   M+K G+LPD  L
Sbjct: 488 ALCRSGQAAGAHAIFQEMVKRGVLPDTVL 516



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 153/319 (47%), Gaps = 6/319 (1%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAG-KEF--GPSVVSLNAIMSRYCKLGFAEV 116
           P +    + +I  +C+  RL D +L  Q     KEF   P++ + N ++   CK    + 
Sbjct: 298 PPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDE 357

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A+ L   M  YGL PD  +Y+ L+ GLC  G ++ A +   +M + GV PD+ T + +  
Sbjct: 358 AQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILN 417

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
                 ++  A   ++ +  +GS PD+VTY  L+ G C+ G ++E +     M++     
Sbjct: 418 ALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTP 477

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +V +Y+++++++C+SG+   A  +  EM   G+ PD V Y  L+ GL +      A++L 
Sbjct: 478 DVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL 537

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
                K   P+   H  ++ GLC+     +A    + +  +    D   Y  ++ G  KL
Sbjct: 538 KTSLCK---PDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKL 594

Query: 357 GNIGEAVQLYRQLIEKRIS 375
           G + +A QL     E   S
Sbjct: 595 GKVDKARQLVDDASETHTS 613



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 156/332 (46%), Gaps = 44/332 (13%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSET---PR 61
           R+GM+ +A     +M   +   S + +N+L++ +  +  + D   L+  +K  +    P 
Sbjct: 278 RSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPP 337

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+ T +I++D LC+  +L +A   + E A     P VV+ +A++   CKLG  + A  L 
Sbjct: 338 NLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397

Query: 122 CLMLKYGLHPDAFS-----------------------------------YNILIHGLCIA 146
             M K G+ PD+F+                                   YN L+ GLC A
Sbjct: 398 EEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKA 457

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G ++EA+ F   M      PD  +Y+I+        Q +GA  + Q+++ +G  PD V Y
Sbjct: 458 GRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLY 517

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             L+ G  + G  +  L+L +  L    K + + + +++  +CK+G+ ++A  ++  M  
Sbjct: 518 HSLLDGLARNGLEDLALELLKTSLC---KPDFVMHKMVVDGLCKAGKAEDACEVVERMAD 574

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
            G   D  TY  ++RGL K  KV KA QL ++
Sbjct: 575 AGFPADAFTYINVVRGLRKLGKVDKARQLVDD 606


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 173/663 (26%), Positives = 302/663 (45%), Gaps = 93/663 (14%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +L   Y + G V DA   I  M E   K S+ + N++L  L     ++ +W    +    
Sbjct: 165 LLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDR 224

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           + P +V T +IV++ LC Q +L  A   LQ+       P+ V+ N I++ Y K G  + A
Sbjct: 225 KFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSA 283

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             +   M K G+  D ++YNI+I  LC       A      M    + PD  +Y+ L  G
Sbjct: 284 LRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHG 343

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE-----------GLKLR 226
           F    +I+ A  +  ++L +   P + TYT LI GYC+ G  +E           G++ R
Sbjct: 344 FFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPR 403

Query: 227 EV---------MLSQGFKLNVIAYSVLLS------------------------------- 246
           EV         ML+ G   +VI YS L++                               
Sbjct: 404 EVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIID 463

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL----------------------- 283
           S C+ G + EA  +   M   G  PD+ TY  L+RGL                       
Sbjct: 464 SYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAI 523

Query: 284 ------------CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
                       CK   + +A+ L  +M ++ I P+++ +  +L G C++  +  A +  
Sbjct: 524 DEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILL 583

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR-ISPSIVTFNSLIYGFCK 390
             ++    + D + Y  +++G V  G +  A  +++++I K  +    + +NS++ G+ K
Sbjct: 584 QMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLK 643

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G++ +  RL+  +  + + PS+ +Y   M+ Y ++G + R L L ++M  + I P +VT
Sbjct: 644 GGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVT 703

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM- 509
           Y ++I GLC+   ++ AV+ LE M + GV PD + ++ +I++F +   +  A QL + M 
Sbjct: 704 YRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMK 763

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
           WLH + P+S TY  +++GL     L+ +  +L  + E  +      Y  +I A C  GD+
Sbjct: 764 WLH-MSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDI 822

Query: 570 HKA 572
             A
Sbjct: 823 DGA 825



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 153/636 (24%), Positives = 283/636 (44%), Gaps = 63/636 (9%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A  ++ +M+E++L     +YN+L++        ++   +++ +       +V T + +ID
Sbjct: 318 AYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALID 377

Query: 72  GLCQQSRLQDA--ILFLQETAGKE------------------FGPSVVSLNAIMSRYCKL 111
           G C+  R  +A  +L+  +  G                      P V++ +A+++     
Sbjct: 378 GYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINE---- 433

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G    A+     M +  +  D  S+N +I   C  G++ EA    ++M RHG  PD  TY
Sbjct: 434 GMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTY 493

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
             L +G      +  A + +  LL K    D  T   L+ G C+ G ++E L L E M++
Sbjct: 494 GSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT 553

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +    +   Y++LL   CK G++  AL LL  M   GL PD + Y+ L+ GL  + +V  
Sbjct: 554 RNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKA 613

Query: 292 AIQLYNEM-CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           A  ++ E+ C + +  +  A+ +++ G  +   I E      ++  +        YNI++
Sbjct: 614 ASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILM 673

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-- 408
            GY+K G +   + LYR ++++ I P  VT+  LI+G C+ G +  A + L+ + L G  
Sbjct: 674 HGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVF 733

Query: 409 ---------------------------------LEPSAVTYTTFMNAYCEEGNIQRLLAL 435
                                            + PS+ TY   +N    +  +Q+   +
Sbjct: 734 PDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEI 793

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           L +M    + P H  Y  +I   C+   +  A +L EDM  +GV P ++  ++I+R  CK
Sbjct: 794 LHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCK 853

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
           C  + +A  + + +    + PT AT+  L+ GLC    + +A  L   ++   + +  V 
Sbjct: 854 CGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVT 913

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           Y  +I   C +  +  A+  + +M  KG   +I  Y
Sbjct: 914 YNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTY 949



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 130/523 (24%), Positives = 251/523 (47%), Gaps = 1/523 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V + + +ID  CQ+  + +A           + P + +  +++   C+ G    AK   
Sbjct: 454 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 513

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +L+     D  + N L+ G+C  G+++EAL+    M    + PD  TY+IL  GF   
Sbjct: 514 VYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKR 573

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG-LKLREVMLSQGFKLNVIA 240
            ++  A  ++Q +L KG  PD + YT L+ G    G V+      +E++  +G   + IA
Sbjct: 574 GKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIA 633

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ +++   K G+I+E   L+  M    + P   +Y+IL+ G  K+ ++ + + LY +M 
Sbjct: 634 YNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMV 693

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            + I P++  +  ++ GLCE  +I  A  + + +++     D + ++I+I  + +   + 
Sbjct: 694 KEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMS 753

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A+QL+  +    +SPS  T+ +++ G  +   +  +  +L  +   GL+P    Y   +
Sbjct: 754 NALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALI 813

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           NA C  G+I     L ++M+   + P+ V  + +++GLCK  K++EA+ +   +   G+ 
Sbjct: 814 NAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMV 873

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P   T+ T++   CK   +  AF L   M    L+    TYN+LI GLC    + +A  L
Sbjct: 874 PTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDL 933

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
              ++   +      Y T+  A  A G +         + ++G
Sbjct: 934 YEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRG 976



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 151/616 (24%), Positives = 290/616 (47%), Gaps = 41/616 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++++ + +++ L   ++ +   LFL+E+  ++F   V + N +++  C  G    A+ + 
Sbjct: 194 SLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESML 253

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M    L P+A +YN +++     G  + AL   +DM ++G+E D  TY+I+      L
Sbjct: 254 QKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKL 312

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            + + A+ +++++      PD  +Y  LI G+   G +   + +   ML Q  K +V  Y
Sbjct: 313 KRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATY 372

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLK--------------------PDLVTYSILIR 281
           + L+   C++GR DEA  +LYEM+  G++                    PD++TYS LI 
Sbjct: 373 TALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALI- 431

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
               +  + +A Q    M   +IS +  +   I+   C++  + EA   +D+++      
Sbjct: 432 ---NEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPP 488

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D+  Y  ++ G  + G++ +A +    L+EK  +    T N+L+ G CK+G + +A  L 
Sbjct: 489 DICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLC 548

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           + +    + P   TYT  ++ +C+ G +   L LLQ M  K + P  + YT ++ GL  +
Sbjct: 549 EKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNE 608

Query: 462 WKLQEAVQLLEDMYVI-GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
            +++ A  + +++    G+  D I YN+++  + K   + +  +L+  M  + + P+SA+
Sbjct: 609 GQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSAS 668

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           YNIL+ G    G L     L   + +  I    V Y  +I   C  G +  A+ F  +MV
Sbjct: 669 YNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMV 728

Query: 581 EKG-------FEISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
            +G       F+I I+ +++          F  M      P  +    M+    +   L 
Sbjct: 729 LEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQ 788

Query: 626 SVFELAAVMIKSGLLP 641
             +E+   M++SGL P
Sbjct: 789 QSYEILHDMVESGLQP 804



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/544 (24%), Positives = 252/544 (46%), Gaps = 4/544 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLL--YNLRHTDI-MWDLYDDIKVSETPRNVYTN 66
           GM+ +A      M  + +   + ++N ++  Y  R   +  + +YD++     P ++ T 
Sbjct: 434 GMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTY 493

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
             ++ GLCQ   L  A  F+     K       +LN ++   CK G  + A  L   M+ 
Sbjct: 494 GSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT 553

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + PD ++Y IL+ G C  G +  AL     M   G+ PD I Y+ L  G     Q+  
Sbjct: 554 RNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKA 613

Query: 187 AWKVIQKLLIK-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
           A  + Q+++ K G   D + Y  ++ GY + G + E  +L   M       +  +Y++L+
Sbjct: 614 ASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILM 673

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
               K G++   L L  +M   G+KPD VTY +LI GLC+   +  A++   +M  + + 
Sbjct: 674 HGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVF 733

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P++ A   ++    EK  ++ A   F  +   +       Y  M++G ++   + ++ ++
Sbjct: 734 PDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEI 793

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
              ++E  + P    + +LI   C+ G +  A  L + +K  G+ PS V  ++ +   C+
Sbjct: 794 LHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCK 853

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G ++  + +   +    + PT  T+T ++ GLCK++K+ +A  L + M   G+  D +T
Sbjct: 854 CGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVT 913

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YN +I   C  K +  A  L  +M    L P   TY  L   +   G +++ + LL  ++
Sbjct: 914 YNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIE 973

Query: 546 EHNI 549
           +  I
Sbjct: 974 DRGI 977



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 246/516 (47%), Gaps = 15/516 (2%)

Query: 16   VFVIAKMKELDLKVSIQTYNSLLYNL-RHT--DIMWDLYDDIKVSETPRNVYTNSIVIDG 72
            V+++ K   +D K    T N+LL  + +H   D   DL + +       + YT +I++DG
Sbjct: 514  VYLLEKACAIDEK----TLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDG 569

Query: 73   LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC-LMLKYGLHP 131
             C++ ++  A++ LQ    K   P  ++   +++     G  + A  +F  ++ K GL+ 
Sbjct: 570  FCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYA 629

Query: 132  DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
            D  +YN +++G    G + E      +M  + V P + +Y+IL  G+    Q+S    + 
Sbjct: 630  DCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLY 689

Query: 192  QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            + ++ +G  PD VTY +LI G C+ G +E  +K  E M+ +G   + +A+ +L+ +  + 
Sbjct: 690  RDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEK 749

Query: 252  GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
             ++  AL L   M+ + + P   TY  ++ GL +++ + ++ ++ ++M    + P    +
Sbjct: 750  SKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHY 809

Query: 312  GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             A++   C    I  A    + +     +   V  + ++ G  K G + EA+ ++  ++ 
Sbjct: 810  IALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMR 869

Query: 372  KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
              + P+I TF +L++G CK  K+ DA  L   ++  GL+   VTY   +   C +  I  
Sbjct: 870  AGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICD 929

Query: 432  LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD-------QI 484
             L L +EM++K + P   TY  +   +     +Q+  +LL+D+   G+ P        + 
Sbjct: 930  ALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESLEW 989

Query: 485  TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
                 I+     ++ RK     N++ L  ++  +A 
Sbjct: 990  RMENAIKRLNTIRNCRKGISFKNEVELLPVDHEAAN 1025



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 107/457 (23%), Positives = 191/457 (41%), Gaps = 72/457 (15%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP------------------------- 271
           N+ +  +L+++  K G++ +A   ++ M+  G K                          
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFL 218

Query: 272 ----------DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
                     D+ T +I++  LC Q K+ KA  +  +M + R+ PN+  +  IL    +K
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKK 277

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
                A    D +  +    D+  YNIMID   KL     A  L +++ E  ++P   ++
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N+LI+GF   GK+  A  + + +    L+PS  TYT  ++ YC  G       +L EM+ 
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI 397

Query: 442 KAIGPTHVTYT----------------VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
             + P  V+                  +    L  +  + EA Q  + M  + ++ D  +
Sbjct: 398 TGVRPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVAS 457

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           +N II S+C+  ++ +AF + + M  H   P   TY  L+ GLC  G L  A   +V L 
Sbjct: 458 FNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLL 517

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
           E   ++ +    T++   C  G + +A+     + EK                M++    
Sbjct: 518 EKACAIDEKTLNTLLVGICKHGTLDEAL----DLCEK----------------MVTRNIL 557

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           PD     ++L  F + G +     L  +M++ GL+PD
Sbjct: 558 PDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPD 594


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 178/689 (25%), Positives = 311/689 (45%), Gaps = 77/689 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPR 61
           Y RTG +  A +++  M  +  + +  +Y  L+  L  T  + +    L   ++   +P 
Sbjct: 228 YCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSP- 286

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N++T +++I GLC++ R+ DA + L E   +   PSV + NA++  YCK G  + A G+ 
Sbjct: 287 NLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIK 346

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            LM   G +PD ++YN LIHGLC  G  +EA E  N     G  P  IT++ +  G+   
Sbjct: 347 TLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKA 405

Query: 182 SQISGAWKV-----------------------------------IQKLLIKGSDPDIVTY 206
            +I  A +V                                   + ++   G  P++V Y
Sbjct: 406 EKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIY 465

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T +I  YC++G V   L++ ++   +G + N   YS L+  + +  ++ +A+ L+ +M+ 
Sbjct: 466 TSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQE 525

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G+ P ++TY+ LI+G CK+ +   A +L+  M    ++P+  A+  +   LC+     E
Sbjct: 526 DGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEE 585

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A   +  L+    +   V Y  ++DG+ K GN   A  L  +++ +       T++ L+ 
Sbjct: 586 A---YSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQ 642

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             CK  K+ +A  +LD + L G++ + V YT  ++   +EG      ++  EM +    P
Sbjct: 643 ALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKP 702

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
           + +TYTV I   CK  +++EA  L+ +M   GV PD +TYN  I        +  AF  L
Sbjct: 703 SAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTL 762

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADC-----------------LLVSLQEHNI 549
            +M   + EP   TY +L+    +   L NA                   LL  + +H +
Sbjct: 763 KRMIDASCEPNYWTYWLLLKHF-LKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGL 821

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF---------------EISIRDYTKS 594
           + T V Y++II   C    + +A      M+ K                 +I + +   S
Sbjct: 822 NPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAAS 881

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           F   M+  GF P  E    ++      GD
Sbjct: 882 FVTNMIECGFQPHLESYHYLITGLCDEGD 910



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 174/652 (26%), Positives = 301/652 (46%), Gaps = 28/652 (4%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDD-IKVSETPRNVYTNSIV 69
           DA+  I +     L +S + YN  L +L   D+   M  LY   ++    P  V  N+++
Sbjct: 131 DAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMI 190

Query: 70  IDGLCQQSRLQDAILFLQ--ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           +   C++  L  A  + +    +G E      + NA++  YC+ G    A  L  +M   
Sbjct: 191 M-AYCKEGSLAIAHRYFRLLRESGMEM--DTYTCNALLLGYCRTGDLRKACWLLMMMPLM 247

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G   + +SY ILI GLC    + EAL     M + G  P+  TY++L +G     +I  A
Sbjct: 248 GCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDA 307

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             ++ ++  +G  P + TY  +I GYC+ G +++ L ++ +M   G   +   Y+ L+  
Sbjct: 308 RVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHG 367

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C  G+ DEA  LL    A G  P ++T++ +I G CK +K+  A+++ + M S +   +
Sbjct: 368 LC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLD 426

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
             A+G ++  L +K  + EA+   + +  +    +VV+Y  +ID Y K+G +G A+++++
Sbjct: 427 LQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFK 486

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
               +   P+  T++SLIYG  ++ K+  A  L+  ++  G+ P  +TYTT +   C++ 
Sbjct: 487 LTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 546

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
                  L + ME   + P    Y V+   LCK  + +EA   L      GV   ++TY 
Sbjct: 547 EFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKK---GVVLTKVTYT 603

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           +++  F K  +   A  L+ +M     +  S TY++L+  LC    L  A  +L  +   
Sbjct: 604 SLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLR 663

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM------- 598
            +    VAYT II     EG    A + F +M+  G + S   YT   S +C        
Sbjct: 664 GVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEA 723

Query: 599 ------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                 M  NG  PD     V +      G +   F     MI +   P+ +
Sbjct: 724 GHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYW 775



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 160/597 (26%), Positives = 264/597 (44%), Gaps = 21/597 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL--RHTDIMWDLYDDIKVSETPRNV 63
           Y ++G + DA+ +   M+         TYNSL++ L     D   +L +          V
Sbjct: 333 YCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKPDEAEELLNGAIARGFSPTV 392

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +I+G C+  ++ DA+         +    + +   ++S   K    + AK     
Sbjct: 393 ITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNE 452

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +   GL P+   Y  +I   C  G +  ALE        G  P+A TYS L  G     +
Sbjct: 453 IFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQK 512

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A  +I K+   G  P ++TYT LI G C+    +   +L E+M   G   +  AY+V
Sbjct: 513 LHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNV 572

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L  ++CKSGR +EA   L +   V  K   VTY+ L+ G  K      A  L  +M ++ 
Sbjct: 573 LTDALCKSGRAEEAYSFLVKKGVVLTK---VTYTSLVDGFSKAGNTEFAAALIEKMVNEG 629

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
              +S  +  +L  LC+++ + EA    D + +     ++V Y I+I   +K G    A 
Sbjct: 630 CKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAK 689

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            ++ ++I     PS +T+   I  +CK G++ +A  L+  ++ +G+ P  VTY  F+N  
Sbjct: 690 SMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGC 749

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK---------------QW-KLQEA 467
              G +    + L+ M   +  P + TY +++K   K                W KL   
Sbjct: 750 GHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTV 809

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            QLLE M   G+ P  +TY++II  FCK   L +A  LL+ M   ++ P    Y +LI  
Sbjct: 810 WQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKC 869

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            C     + A   + ++ E        +Y  +I   C EGD  KA   FC ++E  +
Sbjct: 870 CCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDY 926



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 239/505 (47%), Gaps = 19/505 (3%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++I  L ++ RL++A   L E       P+VV   +I+  YCK+G    A  +F L    
Sbjct: 432 VLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHE 491

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  P+A++Y+ LI+GL     + +A+     M   G+ P  ITY+ L +G     +   A
Sbjct: 492 GCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNA 551

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           +++ + +   G  PD   Y VL    C+ G  EE       ++ +G  L  + Y+ L+  
Sbjct: 552 FRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVKKGVVLTKVTYTSLVDG 608

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
             K+G  + A  L+ +M   G K D  TYS+L++ LCKQ K+++A+ + ++M  + +  N
Sbjct: 609 FSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGN 668

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
             A+  I+  + ++     A+  F+ +I S      + Y + I  Y K+G I EA  L  
Sbjct: 669 IVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIG 728

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY---------TT 418
           ++    ++P +VT+N  I G    G +  A   L  +     EP+  TY          +
Sbjct: 729 EMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMS 788

Query: 419 FMNAYCEEGN-------IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
             NA+  + +       +  +  LL+ M    + PT VTY+ +I G CK  +L+EA  LL
Sbjct: 789 LANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLL 848

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
           + M    ++P++  Y  +I+  C  K   KA   +  M     +P   +Y+ LI GLC  
Sbjct: 849 DHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDE 908

Query: 532 GDLKNADCLLVSLQEHNISLTKVAY 556
           GD   A  L   L E + +  +VA+
Sbjct: 909 GDYDKAKALFCDLLEMDYNHNEVAW 933



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 225/483 (46%), Gaps = 19/483 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N +T S +I GL Q  +L  A+  + +       P V++   ++   CK    + A  LF
Sbjct: 496 NAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 555

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M + GL PD  +YN+L   LC +G  EEA  F   + + GV    +TY+ L  GF   
Sbjct: 556 EMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVKKGVVLTKVTYTSLVDGFSKA 612

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
                A  +I+K++ +G   D  TY+VL+   C+   + E L + + M  +G K N++AY
Sbjct: 613 GNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAY 672

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++++S M K G+ D A  +  EM + G KP  +TY++ I   CK  ++ +A  L  EM  
Sbjct: 673 TIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMER 732

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG---- 357
             ++P+   +   + G      +  A      +I ++C  +   Y +++  ++K+     
Sbjct: 733 NGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANA 792

Query: 358 ------------NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
                        +    QL  ++++  ++P+ VT++S+I GFCK  ++ +A  LLD + 
Sbjct: 793 HYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHML 852

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
              + P+   YT  +   C+    ++  + +  M      P   +Y  +I GLC +    
Sbjct: 853 GKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYD 912

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           +A  L  D+  +    +++ +  +     K   +    QLL+ M   +    S TY+++ 
Sbjct: 913 KAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVT 972

Query: 526 DGL 528
           + +
Sbjct: 973 NNI 975



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 178/398 (44%), Gaps = 26/398 (6%)

Query: 62   NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            + +T S+++  LC+Q +L +A+  L +   +    ++V+   I+S   K G  + AK +F
Sbjct: 633  DSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMF 692

Query: 122  CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              M+  G  P A +Y + I   C  G +EEA     +M R+GV PD +TY++   G   +
Sbjct: 693  NEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHM 752

Query: 182  SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI-A 240
              +  A+  +++++    +P+  TY +L                    L    K+++  A
Sbjct: 753  GYMDCAFSTLKRMIDASCEPNYWTYWLL--------------------LKHFLKMSLANA 792

Query: 241  YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
            + V  S M    ++D    LL  M   GL P  VTYS +I G CK  ++ +A  L + M 
Sbjct: 793  HYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHML 852

Query: 301  SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
             K ISPN   +  ++   C+ ++  +A  +  ++I       +  Y+ +I G    G+  
Sbjct: 853  GKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYD 912

Query: 361  EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            +A  L+  L+E   + + V +  L  G  K G V    +LL  ++       + TY+   
Sbjct: 913  KAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVT 972

Query: 421  NAYCE-----EGNIQRLLALLQEMETKAIGPTHVTYTV 453
            N   E     E  +   L     M+   +G  H+TY+ 
Sbjct: 973  NNIHEASGMYESYMCAPLVGQNRMQHALLGLAHLTYSA 1010



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 162/380 (42%), Gaps = 25/380 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           +S+ G    A  +I KM     K    TY+ LL  L   +  +    + D + +     N
Sbjct: 609 FSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGN 668

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           +   +I+I  + ++ +   A     E       PS ++    +S YCK+G  E A  L  
Sbjct: 669 IVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIG 728

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + G+ PD  +YN+ I+G    G M+ A      M     EP+  TY +L K F  +S
Sbjct: 729 EMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMS 788

Query: 183 ----------------QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
                           ++   W+++++++  G +P  VTY+ +I G+C+   +EE   L 
Sbjct: 789 LANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLL 848

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           + ML +    N   Y++L+   C     ++A   +  M   G +P L +Y  LI GLC +
Sbjct: 849 DHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDE 908

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
               KA  L+ ++     + N  A   +  GL +   +        ++   +C  D   Y
Sbjct: 909 GDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETY 968

Query: 347 NIMIDGYVKLGNIGEAVQLY 366
           +++ +      NI EA  +Y
Sbjct: 969 SMVTN------NIHEASGMY 982


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/511 (29%), Positives = 257/511 (50%), Gaps = 22/511 (4%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRN----- 62
           R+  +  A  ++ +MKE+        YN+L+            +  +  +E  +N     
Sbjct: 54  RSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFL--AEMVKNHCLPT 111

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + ++DGLC+  R +DA+  L E   K   P++ + N I+   C+    + AK +  
Sbjct: 112 VVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLE 171

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G  PD  +YN  I GLC    ++EA +F   + R  V PD ++Y+ +  G     
Sbjct: 172 EMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSG 228

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A +++  +  +G  PD+VTY+ LI G+C+ G VE  + L + ML  G + N++AY+
Sbjct: 229 DLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYN 288

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            LL ++ + G I +A  +L EME  G  PD+V+Y+  I GLCK ++V KA  +++ M  +
Sbjct: 289 SLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER 348

Query: 303 RISPNSFAHGAILL----------GLCEKEMITEARMYFDSLIMSN-CIQDVVLYNIMID 351
             +PN+ ++  +++          GLC+     EA   F  ++    C  DV  YN+M+D
Sbjct: 349 GCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLD 408

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
            + K   I +A+Q+++Q++EK    ++VT+N L++G C + +++DA  +L T+   G  P
Sbjct: 409 SHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIP 467

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
             VTY T ++A C+ G     L L +E       P  VTY+ +I GL  +   +EA  L 
Sbjct: 468 DFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLF 527

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
             +      PD  T   + R        RKA
Sbjct: 528 TKLVERRWVPDDKTLGLLHRKLKLLNKPRKA 558



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 247/498 (49%), Gaps = 15/498 (3%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           +V + N ++ +  +    + A  +F  M+     PDAF++ IL+ GLC +  +E+A +  
Sbjct: 6   NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
             M   G  PD   Y+ L  G+        A+K + +++     P +VTYT ++ G C+ 
Sbjct: 66  GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
               + +KL + M  +G   N+  Y+V++  +C+  ++DEA  +L EM   G  PD+VTY
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +  I+GLCK D+V +A +    M    ++P+  ++  ++ GLC+   +  A    D +  
Sbjct: 186 NSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSN 242

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
             C  DVV Y+ +IDG+ K G +  A+ L   +++    P++V +NSL+    + G +  
Sbjct: 243 RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGK 302

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT------ 450
           A  +L  ++  G  P  V+Y   ++  C+   +++  A+   M  +   P   +      
Sbjct: 303 AEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIV 362

Query: 451 ----YTVVIKGLCKQWKLQEAVQLLEDMYVIGV-TPDQITYNTIIRSFCKCKDLRKAFQL 505
               YTV++ GLCK  +  EA  L   +    +  PD   YN ++ S CK + + KA Q+
Sbjct: 363 DILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQI 422

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
             QM   N      T+NIL+ GLCV+  L +A+ +L+++ +       V Y T++ A C 
Sbjct: 423 HKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCK 481

Query: 566 EGDVHKAMTFFCQMVEKG 583
            G    A+  F + V+ G
Sbjct: 482 CGKSAAALELFEEAVKGG 499



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 186/360 (51%), Gaps = 3/360 (0%)

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G++ NV  Y+ LL  + +  R D+A  +  EM     +PD  T++IL+RGLC+ +++ KA
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            +L   M      P+   + A++ G  + +   +A  +   ++ ++C+  VV Y  ++DG
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
             K     +AV+L  ++ +K  SP+I T+N ++ G C+  K+ +A+++L+ + + G  P 
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            VTY +F+   C+   +      L  M    + P  V+YT VI GLCK   L  A ++L+
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            M   G TPD +TY+++I  FCK  ++ +A  LL+ M      P    YN L+  L   G
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            +  A+ +LV ++    +   V+Y   I   C    V KA   F +MVE+G   +   Y+
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 166/326 (50%), Gaps = 3/326 (0%)

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           +G + ++ TY+ L+  L ++ +  KA  ++ EM  K   P++F    +L GLC    + +
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           AR     +    C+ D  +YN +I GY K  + G+A +   ++++    P++VT+ +++ 
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G CK  +  DA +LLD ++  G  P+  TY   +   CEE  +     +L+EM  +   P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             VTY   IKGLCK  ++ EA + L  M    VTPD ++Y T+I   CK  DL  A ++L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           + M      P   TY+ LIDG C  G+++ A  LL S+ +       VAY +++ A    
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYT 592
           G + KA     +M  +GF   +  Y 
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYN 323



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 139/307 (45%), Gaps = 23/307 (7%)

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            +V  YN ++    +     +A  +++++I+K   P   TF  L+ G C++ ++  AR+L
Sbjct: 5   HNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKL 64

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L  +K  G  P    Y   ++ Y +  +  +    L EM      PT VTYT ++ GLCK
Sbjct: 65  LGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCK 124

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             + ++AV+LL++M   G +P+  TYN I+   C+ + L +A ++L +M +    P   T
Sbjct: 125 AERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVT 184

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           YN  I GLC    +  A   L  +    ++   V+YTT+I   C  GD+  A      M 
Sbjct: 185 YNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMS 241

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
            +G    +  Y+                     ++  F +GG++     L   M+K G  
Sbjct: 242 NRGCTPDVVTYSS--------------------LIDGFCKGGEVERAMGLLDSMLKLGCR 281

Query: 641 PDKFLIN 647
           P+    N
Sbjct: 282 PNMVAYN 288



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 140/311 (45%), Gaps = 30/311 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           + + G V  A+ ++  M +L  + ++  YNSL   L+ L H     D+  +++      +
Sbjct: 259 FCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPD 318

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V + +  IDGLC+  R++ A                    A+  R  + G    A     
Sbjct: 319 VVSYNACIDGLCKAERVKKA-------------------KAVFDRMVERGCTPNASSYSM 359

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLL 181
           L++      D   Y +L+ GLC  G  +EA   F+  +     EPD   Y+++       
Sbjct: 360 LIV------DILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKR 413

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            QI  A ++ +++L K    ++VT+ +L+ G C    + +   +   M+ +GF  + + Y
Sbjct: 414 RQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTY 472

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
             L+ +MCK G+   AL L  E    G  PD+VTYS LI GL  ++   +A  L+ ++  
Sbjct: 473 GTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVE 532

Query: 302 KRISPNSFAHG 312
           +R  P+    G
Sbjct: 533 RRWVPDDKTLG 543


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 269/526 (51%), Gaps = 3/526 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAK 118
           +V++ +I++ GLC ++R Q+A+  L   A    G   P VVS   +++ + K G ++ A 
Sbjct: 157 DVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAY 216

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             +  ML   + PD  +Y+ +I  LC   +M++A+E    M ++GV P+ +TY+ +  G+
Sbjct: 217 STYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGY 276

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               Q   A   ++K+   G +PD+VTY  L+   C+ G   E  K+ + M  +G + ++
Sbjct: 277 CSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDI 336

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y  LL      G + E   LL  M   G+ PD   ++ILI    KQ+KV +A+ ++++
Sbjct: 337 ATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSK 396

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M    ++PN   +GA++  LC+   + +A +YF+ +I      ++++Y  +I        
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDK 456

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             +A +L  +++++ I  + + FNS+I+  CK G+V ++ +L D +   G++P+ +TY+T
Sbjct: 457 WDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYST 516

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++ YC  G +     LL  M +  + P  VTY  +I G C+  ++ +A+ L ++M   G
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           V+P+ ITYN I++     +    A +L   +     +   +TYNI++ GLC N     A 
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEAL 636

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            +  +L   ++ L    +  +I A    G   +A   F      G 
Sbjct: 637 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGL 682



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 144/560 (25%), Positives = 259/560 (46%), Gaps = 2/560 (0%)

Query: 44  TDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNA 103
           +D  +  Y ++       +V T S +I  LC+   +  A+  L         P+ ++ N+
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           I+  YC     + A G    M   G+ PD  +YN L+  LC  G   EA +  + M + G
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           +EPD  TY  L +G+     +     ++  ++  G  PD   + +LIC Y +   V+E +
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
            +   M   G   NV+ Y  ++  +CKSG +D+A+    +M   GL P+++ Y+ LI  L
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           C  DK  KA +L  EM  + I  N+    +I+   C++  + E+   FD ++      +V
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNV 511

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           + Y+ +IDGY   G + EA +L   +    + P  VT+N+LI G+C+  ++ DA  L   
Sbjct: 512 ITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +   G+ P+ +TY   +              L   +          TY +++ GLCK   
Sbjct: 572 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNL 631

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
             EA+++ +++ +  +  +  T+N +I +  K     +A  L      + L P   TY +
Sbjct: 632 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           + + +   G L+  D L  S++++  ++       I++     G++ +A T+   + EK 
Sbjct: 692 MAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 751

Query: 584 FEISIRDYTKSFFCMMLSNG 603
           F  S+   T S F  +LS G
Sbjct: 752 F--SLEASTASLFIDLLSGG 769



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 254/563 (45%), Gaps = 61/563 (10%)

Query: 80  QDAILFLQETAGKEFGPSVVSLN------------AIMSRYCKLGFAEVAKGLFCLMLKY 127
           +DA     E   +  G S+  LN            A +SRY ++  A   K         
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGK--------- 82

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            + P   +Y ILI   C AG ++       ++ + G   +AIT++ L KG     + S A
Sbjct: 83  -VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 188 WKVIQK---------------LLIK------------------------GSDPDIVTYTV 208
             ++ +               +L+K                        GS PD+V+YT 
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTT 201

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           +I G+ + G+ ++       ML +    +V+ YS +++++CK   +D+A+ +L  M   G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           + P+ +TY+ ++ G C  ++  +AI    +M S  + P+   + +++  LC+    TEAR
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             FDS+       D+  Y  ++ GY   G + E   L   ++   I P    FN LI  +
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            K  KV +A  +   ++ HGL P+ VTY   +   C+ G++   +   ++M  + + P  
Sbjct: 382 AKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNI 441

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           + YT +I  LC   K  +A +L+ +M   G+  + I +N+II S CK   + ++ +L + 
Sbjct: 442 IVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDL 501

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    ++P   TY+ LIDG C+ G +  A  LL S+    +    V Y T+I  +C    
Sbjct: 502 MVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR 561

Query: 569 VHKAMTFFCQMVEKGFEISIRDY 591
           +  A+  F +MV  G   +I  Y
Sbjct: 562 MDDALALFKEMVSSGVSPNIITY 584



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 241/544 (44%), Gaps = 71/544 (13%)

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           D+ RH        Y+ +A+        +GA KV          P + TY +LI   C+ G
Sbjct: 59  DVARHSPAAAVSRYNRMAR--------AGAGKVT---------PTVHTYGILIGCCCRAG 101

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL-LYEMEAVGLKPDLVTY 276
            ++ G      ++ +GF++  I ++ LL  +C   R  +A+ + L  M  +   PD+ + 
Sbjct: 102 RLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSC 161

Query: 277 SILIRGLCKQDKVHKAIQL--------------------------------------YNE 298
           +IL++GLC +++  +A++L                                      Y+E
Sbjct: 162 TILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHE 221

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  +RISP+   + +I+  LC+ + + +A     +++ +  + + + YN ++ GY     
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             EA+   +++    + P +VT+NSL+   CKNG+  +AR++ D++   GLEP   TY T
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCT 341

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +  Y  +G +  + ALL  M    I P H  + ++I    KQ K+ EA+ +   M   G
Sbjct: 342 LLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHG 401

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           + P+ +TY  +I   CK   +  A     QM    L P    Y  LI  LC+      A+
Sbjct: 402 LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAE 461

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFF 596
            L++ + +  I L  + + +II +HC EG V ++   F  MV  G + ++  Y+     +
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY 521

Query: 597 CM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           C+             M S G  PD      ++  + +   +     L   M+ SG+ P+ 
Sbjct: 522 CLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNI 581

Query: 644 FLIN 647
              N
Sbjct: 582 ITYN 585



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/525 (24%), Positives = 235/525 (44%), Gaps = 40/525 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL----YNLRHTDIMWDLYDDIKVSETPR 61
           Y  +    +A+  + KM+   ++  + TYNSL+     N R T+    ++D +       
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE-ARKIFDSMTKRGLEP 334

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T   ++ G   +  L +    L         P     N ++  Y K    + A  +F
Sbjct: 335 DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVF 394

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M ++GL+P+  +Y  +I  LC +GS+++A+ +   M   G+ P+ I Y+ L     + 
Sbjct: 395 SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIF 454

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A ++I ++L +G   + + +  +I  +C+ G V E  KL ++M+  G K NVI Y
Sbjct: 455 DKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITY 514

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S L+   C +G++DEA  LL  M +VG+KPD VTY+ LI G C+  ++  A+ L+ EM S
Sbjct: 515 STLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVS 574

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +SPN                                   ++ YNI++ G         
Sbjct: 575 SGVSPN-----------------------------------IITYNIILQGLFHTRRTAA 599

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +LY  + +      + T+N +++G CKN    +A R+   + L  L+    T+   + 
Sbjct: 600 AKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 659

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           A  + G       L     +  + P + TY ++ + +  Q  L+E  QL   M   G T 
Sbjct: 660 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTV 719

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           D    N I+R   +  ++ +A   L+ +   +    ++T ++ ID
Sbjct: 720 DSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 193/401 (48%), Gaps = 6/401 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD--LYDDIKVSE--TP 60
            Y++   V +A+ V +KM++  L  ++ TY +++  L  +  + D  LY +  + E  TP
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N+   + +I  LC   +   A   + E   +    + +  N+I+  +CK G    ++ L
Sbjct: 440 -NIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKL 498

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F LM++ G+ P+  +Y+ LI G C+AG M+EA +  + M   G++PD +TY+ L  G+  
Sbjct: 499 FDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCR 558

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +S++  A  + ++++  G  P+I+TY +++ G           +L   +   G +L +  
Sbjct: 559 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELST 618

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+++L  +CK+   DEAL +   +    L+ +  T++I+I  L K  +  +A  L+    
Sbjct: 619 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFS 678

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           S  + PN + +  +   +  + ++ E    F S+  + C  D  + N ++   ++ G I 
Sbjct: 679 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEIT 738

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
            A      + EK  S    T  SL       GK  +  R L
Sbjct: 739 RAGTYLSMIDEKHFSLEAST-ASLFIDLLSGGKYQEYHRFL 778


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 171/633 (27%), Positives = 293/633 (46%), Gaps = 56/633 (8%)

Query: 2   LAFV---YSRTGMVHDAVFVIAKMKELDLKV-SIQTYNSLLYNLRH---TDIMWDLYDDI 54
           L+FV   Y+ +G+V +A+ +   + ++   V  +   NSLL  L H    +I   +YD++
Sbjct: 134 LSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEM 193

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
                  + YT  IV  GLC++ ++++    +++  GK   P++V  N ++  YCK G  
Sbjct: 194 VDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDI 253

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD-AITYSI 173
           E A  LF  +   G  P   +Y  +I+  C  G  E   +   +M   G+     I   I
Sbjct: 254 ERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGI 313

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +   F    +I  A   ++ ++  G +PD+ TY  LI G C  G V E  +L E  + +G
Sbjct: 314 IDARFKHGCEIEAA-DAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRG 372

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              N  +Y+ L+ +  K+G    A  LL EM   G   DL+ Y  L+ GL    +V  A+
Sbjct: 373 LFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVAL 432

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            + ++M  + I P++  +  ++ GLC+K     A+     ++  N   D  +   ++DG+
Sbjct: 433 TVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGF 492

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA----RRLLDTIKLHGL 409
           ++ GN+ EA +L++  IE+ I  S+V  N++I G+CK G + DA    +R+ + +     
Sbjct: 493 IRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVH---- 548

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P   TY+T ++ Y ++ +++  L +   M  K   P  VT+T +I G C+   L  A +
Sbjct: 549 SPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEK 608

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           + E+M   G  P+ +TY  +I  FCK   L KA     QM ++   P  AT+N L++GL 
Sbjct: 609 VFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLT 668

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            N  +                         I +  +    +  + FF  M+  G++  I 
Sbjct: 669 NNNGIA------------------------ISSKRSNSQPNLTLEFFGMMISDGWDWRIA 704

Query: 590 DYTKSFFCM---------------MLSNGFPPD 607
            Y     C+               M+S GFPPD
Sbjct: 705 AYNSILLCLCQHKMVKPALQLHDKMMSKGFPPD 737



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 158/619 (25%), Positives = 266/619 (42%), Gaps = 62/619 (10%)

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK-YGLHPDAFSYNILIHGLC 144
           L+    KE  P+  +L+ ++S Y   G  + A  L+  ++  +   PD F+ N L++ L 
Sbjct: 119 LETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLV 178

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
             G +E A +  ++M     + D  T  I+ KG     ++     +I+K   KG  P+IV
Sbjct: 179 HHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIV 238

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            Y  LI GYC+ G++E    L + +  +GF   V  Y  ++++ CK G+ +    LL EM
Sbjct: 239 FYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEM 298

Query: 265 EAVGL-----------------------------------KPDLVTYSILIRGLCKQDKV 289
           +  GL                                   +PD+ TY+ LI G C + KV
Sbjct: 299 KERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKV 358

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A +L      + + PN F++  ++    +      A      +       D++ Y  +
Sbjct: 359 REAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGAL 418

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           + G V  G +  A+ +  +++E+ I P    +N L+ G CK G+   A++LL  +    +
Sbjct: 419 VHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNV 478

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P A    T ++ +   GN+     L Q    + I  + V    +IKG CK   + +A+ 
Sbjct: 479 TPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALL 538

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
             + M+    +PD+ TY+TII  + K  DLR A ++   M     +P   T+  LI+G C
Sbjct: 539 CFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFC 598

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV--------- 580
            NGDL  A+ +   ++        V YT +I   C EG + KA  FF QM+         
Sbjct: 599 RNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDA 658

Query: 581 -----------EKGFEISIR------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
                        G  IS +      + T  FF MM+S+G+         +L+   Q   
Sbjct: 659 TFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKM 718

Query: 624 LGSVFELAAVMIKSGLLPD 642
           +    +L   M+  G  PD
Sbjct: 719 VKPALQLHDKMMSKGFPPD 737



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 199/475 (41%), Gaps = 29/475 (6%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF---KLNVIAYSVL 244
           W+  + L I+ S+ D     +    + QI +   GL   E    Q      L+    S L
Sbjct: 45  WQ--EALEIRFSETDTRVSEIAHFVFDQIHDPRLGLNFFEWASKQSTLSNSLDGFVCSSL 102

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS-KR 303
           L  + +     E   LL  M++  L P     S +I        V +A++LYN +     
Sbjct: 103 LKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHN 162

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+ FA  ++L  L     +  AR  +D ++  N   D     I+  G  K G + E  
Sbjct: 163 CVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEG- 221

Query: 364 QLYRQLIEKRIS----PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
              R LIEKR      P+IV +N+LI G+CKNG +  A  L   +K+ G  P+  TY   
Sbjct: 222 ---RHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAM 278

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +NA+C++G  + +  LL EM+ + +  +   +  +I    K     EA   +  M   G 
Sbjct: 279 INAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGC 338

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD  TYNT+I   C    +R+A +LL       L P   +Y  LI     NG+   A  
Sbjct: 339 EPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASE 398

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------- 592
           LL+ + E   +L  +AY  ++      G+V  A+T   +M+E+G       Y        
Sbjct: 399 LLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLC 458

Query: 593 --------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                   K     ML     PD  +   ++  F + G+L    +L  + I+ G+
Sbjct: 459 KKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGI 513


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 153/576 (26%), Positives = 281/576 (48%), Gaps = 41/576 (7%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           V DAV +   M +     SI  +N LL     +   +++  L + ++      ++YT SI
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
            I+  C++S+L                               L  A +AK     M+K G
Sbjct: 124 FINCFCRRSQLS------------------------------LALAVLAK-----MMKLG 148

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  + + L++G C +  + +A+   + M   G +PD  T++ L  G  L ++ S A 
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            ++ +++ +G  PD+VTY  ++ G C+ G+++  L L   M +   K NV+ ++ ++ S+
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK   ++ A+ L  EME  G++P++VTY+ LI  LC   +   A +L + M  K+I+PN 
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
               A++    ++  + EA    + +I  +   D + YN++I+G+     + EA Q+++ 
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           ++ K   P+I T+N+LI GFCK  +V D   L   +   GL  + VTYTT +  + + G+
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
                 + ++M +  +    +TY++++ GLC   KL  A+ + + +    +  +   YNT
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I   CK   + +A+ L   +   +++P   TYN +I GLC    L+ AD L   ++E  
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
                  Y T+I+A+  + D   +     +M   GF
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGF 601



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 152/538 (28%), Positives = 252/538 (46%), Gaps = 12/538 (2%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  M+K    P    +N L+  +      E  +     M   G+  D  TYSI   
Sbjct: 67  AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F   SQ+S A  V+ K++  G +PDIVT + L+ GYC    + + + L + M+  G+K 
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +   ++ L+  +    +  EA+ L+ +M   G +PDLVTY  ++ GLCK+  +  A+ L 
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           N+M + RI  N      I+  LC+   +  A   F  +       +VV YN +I+     
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   +A +L   ++EK+I+P++VTFN+LI  F K GK+ +A +L + +    ++P  +TY
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              +N +C    +     + + M +K   P   TY  +I G CK  ++++ V+L  +M  
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+  + +TY TII+ F +  D   A  +  QM  + +     TY+IL+ GLC  G L  
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS--------- 587
           A  +   LQ+  + L    Y T+I+  C  G V +A   FC +  K   ++         
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLC 546

Query: 588 ---IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              +       F  M  +G  P+      ++ A  +  D  +  EL   M  SG + D
Sbjct: 547 SKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGD 604



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 150/559 (26%), Positives = 267/559 (47%), Gaps = 18/559 (3%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           ++ DA+    +       PS+V  N ++S   K+   E+   L   M   G+  D ++Y+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           I I+  C    +  AL     M + G EPD +T S L  G+    +IS A  ++ +++  
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  PD  T+T LI G        E + L + M+ +G + +++ Y  +++ +CK G ID A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L LL +MEA  +K ++V ++ +I  LCK   V  A+ L+ EM +K I PN   + +++  
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC     ++A     +++      +VV +N +ID + K G + EA +L+ ++I++ I P 
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            +T+N LI GFC + ++ +A+++   +      P+  TY T +N +C+   ++  + L +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM  + +    VTYT +I+G  +      A  + + M    V  D +TY+ ++   C   
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            L  A  +   +    +E     YN +I+G+C  G +  A  L  SL   +I    V Y 
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYN 539

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG-----------FEISIRDYTKS----FFCMMLSN 602
           T+I   C++  + +A   F +M E G              ++RD  ++        M S+
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599

Query: 603 GFPPDQEICEVMLIAFHQG 621
           GF  D     ++    H G
Sbjct: 600 GFVGDASTISLVTNMLHDG 618



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 234/483 (48%), Gaps = 6/483 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           + R   +  A+ V+AKM +L  +  I T +SLL    H+  + D   L D +       +
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T + +I GL   ++  +A+  + +   +   P +V+   +++  CK G  ++A  L  
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M    +  +   +N +I  LC    +E A++   +M   G+ P+ +TY+ L        
Sbjct: 248 KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           + S A +++  +L K  +P++VT+  LI  + + G + E  KL E M+ +    + I Y+
Sbjct: 308 RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYN 367

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L++  C   R+DEA  +   M +    P++ TY+ LI G CK  +V   ++L+ EM  +
Sbjct: 368 LLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR 427

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +  N+  +  I+ G  +      A+M F  ++ +    D++ Y+I++ G    G +  A
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + +++ L +  +  +I  +N++I G CK GKV +A  L  ++    ++P  VTY T ++ 
Sbjct: 488 LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISG 544

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C +  +Q    L ++M+     P   TY  +I+   +      + +L+++M   G   D
Sbjct: 545 LCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGD 604

Query: 483 QIT 485
             T
Sbjct: 605 AST 607


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 209/369 (56%), Gaps = 2/369 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG-RHGVEPDAITYSILAKGFHLLS 182
           +L+    P+A +YN +I G C  G ++ ALE   +M  R G+ PD  TY+ L  G+  + 
Sbjct: 138 LLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIG 197

Query: 183 QISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           ++  A KV  ++L KG   P  V Y  LI GYC +G ++  L+ RE M+ +G  + V  Y
Sbjct: 198 RMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATY 257

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++L+ ++    R  +A  +L EM+  G  PD+ TY+ILI G CK+    KA++++ EM  
Sbjct: 258 NLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQ 317

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K +   +  + +++     K  + E    F+  +      DVV+YN +I+ +   G++  
Sbjct: 318 KGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMER 377

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A ++  ++ +KRI P  +T+N+L+ GFC  G++ +AR L+D +   G++P  V+Y T ++
Sbjct: 378 AYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLIS 437

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            Y  +G+I+  L +  EM  K   PT +TY  +I+GLCK  +  +A  L+++M   G+TP
Sbjct: 438 GYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITP 497

Query: 482 DQITYNTII 490
           D  TY ++I
Sbjct: 498 DDSTYISLI 506



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 199/378 (52%), Gaps = 2/378 (0%)

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LREVMLSQGFKLNVIAYSVLLSSMCKS 251
           +LL +   P+ VTY  +I G+C  G V+  L+ +RE+    G   +   Y+ L+S  CK 
Sbjct: 137 ELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKI 196

Query: 252 GRIDEALGLLYEMEAVG-LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           GR+++A+ +  EM   G + P  V Y+ LI G C   K+  A+Q   +M  + I+     
Sbjct: 197 GRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVAT 256

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++  L      ++A    + +  +    DV  YNI+I+GY K GN  +A++++ ++ 
Sbjct: 257 YNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMS 316

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           +K +  + VT+ SLIY F + G+V +  RL +     G+ P  V Y   +N++C  G+++
Sbjct: 317 QKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDME 376

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           R   ++ EME K I P  +TY  +++G C   +L EA  L+++M   G+ PD ++YNT+I
Sbjct: 377 RAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLI 436

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             +    D++ A ++ ++M      PT  TYN LI GLC      +A+ L+  +    I+
Sbjct: 437 SGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGIT 496

Query: 551 LTKVAYTTIIKAHCAEGD 568
                Y ++I+    E +
Sbjct: 497 PDDSTYISLIEGLTTEDE 514



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 213/416 (51%), Gaps = 7/416 (1%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           A  + A +  L L +   T+N +L +L  T       + ++    P N  T + VI G C
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPRP-NAVTYNTVIAGFC 158

Query: 75  QQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LH 130
            + R+Q A+  ++E   +E G   P   +   ++S +CK+G  E A  +F  ML  G + 
Sbjct: 159 ARGRVQAALEVMREM--RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVA 216

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P A  YN LI G C  G ++ AL++  DM + G+     TY++L     + ++ S A+ V
Sbjct: 217 PSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAV 276

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++++   G  PD+ TY +LI GYC+ GN ++ L++ E M  +G +   + Y+ L+    +
Sbjct: 277 LEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSR 336

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++ E   L       G++PD+V Y+ LI   C    + +A ++  EM  KRI P+   
Sbjct: 337 KGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMT 396

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C    + EAR   D +       D+V YN +I GY   G+I +A+++  +++
Sbjct: 397 YNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMM 456

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           +K  +P+++T+N+LI G CK  +  DA  L+  +   G+ P   TY + +     E
Sbjct: 457 DKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 210/404 (51%), Gaps = 26/404 (6%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++++L  +C +G+   AL LL +M     +P+ VTY+ +I G C + +V  A+++  EM 
Sbjct: 119 FNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMREMR 174

Query: 301 SKR-ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-QDVVLYNIMIDGYVKLGN 358
            +  I+P+ + +  ++ G C+   + +A   FD ++    +    V+YN +I GY  +G 
Sbjct: 175 ERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGK 234

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +  A+Q    ++++ I+ ++ T+N L++    + + +DA  +L+ ++ +G  P   TY  
Sbjct: 235 LDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNI 294

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +N YC+EGN ++ L + +EM  K +  T VTYT +I    ++ ++QE  +L       G
Sbjct: 295 LINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKG 354

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           + PD + YN +I S C   D+ +A++++ +M    + P   TYN L+ G C+ G L  A 
Sbjct: 355 IRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEAR 414

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            L+  + +  I    V+Y T+I  +  +GD+  A+    +M++KGF  ++  Y       
Sbjct: 415 TLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALI--- 471

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                    Q +C++      QG D  ++ +    M+  G+ PD
Sbjct: 472 ---------QGLCKI-----RQGDDAENLMK---EMVAKGITPD 498



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 152/271 (56%), Gaps = 5/271 (1%)

Query: 22  MKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
           M +  + +++ TYN L++ L    R +D    L +  K   +P +V+T +I+I+G C++ 
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSP-DVFTYNILINGYCKEG 303

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
             + A+   +E + K    + V+  +++  + + G  +    LF + +K G+ PD   YN
Sbjct: 304 NEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYN 363

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
            LI+  C  G ME A E   +M +  + PD +TY+ L +GF LL ++  A  +I ++  +
Sbjct: 364 ALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKR 423

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  PD+V+Y  LI GY   G++++ L++R+ M+ +GF   ++ Y+ L+  +CK  + D+A
Sbjct: 424 GIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDA 483

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
             L+ EM A G+ PD  TY  LI GL  +D+
Sbjct: 484 ENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 190/421 (45%), Gaps = 30/421 (7%)

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           L+L   + S    + V +   LLSS+  +     A  L  ++  + L     T++I++R 
Sbjct: 70  LRLYAQLKSLSVPIPVASLHPLLSSLPSA----PAFALFADIYRLRLPLCTTTFNIMLRH 125

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-Q 341
           LC   K  +A++L  +M      PN+  +  ++ G C +  +  A      +     I  
Sbjct: 126 LCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAP 181

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRL 400
           D   Y  +I G+ K+G + +AV+++ +++ K  ++PS V +N+LI G+C  GK+  A + 
Sbjct: 182 DKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQY 241

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            + +   G+  +  TY   M+A   +       A+L+EM+     P   TY ++I G CK
Sbjct: 242 REDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCK 301

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
           +   ++A+++ E+M   GV    +TY ++I  F +   +++  +L N      + P    
Sbjct: 302 EGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVM 361

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           YN LI+  C  GD++ A  ++  +++  I    + Y T+++  C  G + +A T   +M 
Sbjct: 362 YNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMT 421

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           ++G                      PD      ++  +   GD+     +   M+  G  
Sbjct: 422 KRG--------------------IQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFN 461

Query: 641 P 641
           P
Sbjct: 462 P 462



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 137/305 (44%), Gaps = 21/305 (6%)

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A  L+  +   R+     TFN ++   C  GK   A  LL  +      P+AVTY T 
Sbjct: 98  APAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTV 153

Query: 420 MNAYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
           +  +C  G +Q  L +++EM E   I P   TY  +I G CK  ++++AV++ ++M   G
Sbjct: 154 IAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKG 213

Query: 479 -VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
            V P  + YN +I  +C    L  A Q    M    +  T ATYN+L+  L ++    +A
Sbjct: 214 EVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDA 273

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---- 593
             +L  +Q++  S     Y  +I  +C EG+  KA+  F +M +KG   +   YT     
Sbjct: 274 YAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYV 333

Query: 594 -----------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                        F + +  G  PD  +   ++ +   GGD+   +E+ A M K  + PD
Sbjct: 334 FSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPD 393

Query: 643 KFLIN 647
               N
Sbjct: 394 DMTYN 398



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 160/321 (49%), Gaps = 4/321 (1%)

Query: 6   YSRTGMVHDAVFVIAKM-KELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPR 61
           + + G + DAV V  +M  + ++  S   YN+L+    ++   D+     +D+       
Sbjct: 193 WCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAM 252

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V T ++++  L   +R  DA   L+E     F P V + N +++ YCK G  + A  +F
Sbjct: 253 TVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVF 312

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+   A +Y  LI+     G ++E     N   + G+ PD + Y+ L       
Sbjct: 313 EEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTG 372

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A++++ ++  K   PD +TY  L+ G+C +G ++E   L + M  +G + ++++Y
Sbjct: 373 GDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSY 432

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+S     G I +AL +  EM   G  P L+TY+ LI+GLCK  +   A  L  EM +
Sbjct: 433 NTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVA 492

Query: 302 KRISPNSFAHGAILLGLCEKE 322
           K I+P+   + +++ GL  ++
Sbjct: 493 KGITPDDSTYISLIEGLTTED 513



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 36/213 (16%)

Query: 2   LAFVYSRTGMVH--DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSET 59
           L +V+SR G V   D +F +A  K   ++  +  YN+L                      
Sbjct: 330 LIYVFSRKGQVQETDRLFNVAVKK--GIRPDVVMYNAL---------------------- 365

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
                     I+  C    ++ A   + E   K   P  ++ N +M  +C LG  + A+ 
Sbjct: 366 ----------INSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEART 415

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M K G+ PD  SYN LI G  + G +++AL   ++M   G  P  +TY+ L +G  
Sbjct: 416 LIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLC 475

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
            + Q   A  ++++++ KG  PD  TY  LI G
Sbjct: 476 KIRQGDDAENLMKEMVAKGITPDDSTYISLIEG 508


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 158/604 (26%), Positives = 290/604 (48%), Gaps = 23/604 (3%)

Query: 2    LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVS 57
            L   Y+  GM+  A  +  +++E    +   T+ + L  L      WD    LYD++   
Sbjct: 1082 LVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGK 1141

Query: 58   ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            ++  + Y+  +++ GLC + R+++ +  ++   G    P VV  N ++  YC+ G  ++ 
Sbjct: 1142 DSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRG--DMG 1199

Query: 118  KGLFCL--MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            +GL  L  M   G  P   +Y  LI+ L   G +E+      +M + G  P+   Y+ + 
Sbjct: 1200 RGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVI 1259

Query: 176  KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                     + A  +++++   G DPDI+T+  LI G C  G+V +        + +   
Sbjct: 1260 DALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELN 1319

Query: 236  LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
             N ++Y+ L+   C  G +  A  LL EM   G  PD+VT+  LI GL    KV +A+ +
Sbjct: 1320 PNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIV 1379

Query: 296  YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
              +M  +++ P+   +  ++ GLC+K M+  A+   + ++  N   D  +Y  +IDG+++
Sbjct: 1380 REKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIR 1439

Query: 356  LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
              N+G+A +++  +  K I P IV+ N++I G+C+ G +++A   +  ++  G  P   T
Sbjct: 1440 SENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFT 1499

Query: 416  YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
            YTT ++ Y ++GN+   L  L +M  +   P  VTY+ +I G CK      A  L  +M 
Sbjct: 1500 YTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQ 1559

Query: 476  VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL------- 528
               ++P+ +TY  +I S  K   + +A      M L++  P   T + L++GL       
Sbjct: 1560 AEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCV 1619

Query: 529  -----CVNGDLKNADCLLVSLQEHNISL---TKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
                 C   ++   D LLV  ++    +      AY  II + C    + +A+ F  +M 
Sbjct: 1620 INSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMA 1679

Query: 581  EKGF 584
            +KG+
Sbjct: 1680 KKGY 1683



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 240/531 (45%), Gaps = 36/531 (6%)

Query: 86   LQETAGKEFGPSVVSLNAIMSRYCKLG-FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
            LQ  +     P+   L A+++ Y   G   +  K    +  +YG  P+    N L+  L 
Sbjct: 1064 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLV 1123

Query: 145  IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
                 ++A +  ++M       D  +  +L +G  L  ++    K+I+     G  P +V
Sbjct: 1124 EQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVV 1183

Query: 205  TYTVLICGYCQIGNVEEGL-----------------------------KLREV------M 229
             Y VLI GYC+ G++  GL                              L ++      M
Sbjct: 1184 FYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM 1243

Query: 230  LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
              +GF  NV  Y+ ++ ++CK     +A+ +L +M A G  PD++T++ LI GLC +  V
Sbjct: 1244 RKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 1303

Query: 290  HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             KA     E   + ++PN  ++  ++ G C +  +  A      ++      DVV +  +
Sbjct: 1304 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGAL 1363

Query: 350  IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
            I G V  G + EA+ +  ++ E+++ P +  +N LI G CK   +  A+ +L+ +    +
Sbjct: 1364 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNV 1423

Query: 410  EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            +P    Y T ++ +    N+     + + ME K I P  V+   +IKG C+   + EA+ 
Sbjct: 1424 QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAIL 1483

Query: 470  LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
             + +M  +G  PD+ TY T+I  + K  +L  A + L  M     +P   TY+ LI+G C
Sbjct: 1484 CMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 1543

Query: 530  VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
              GD   A+ L  ++Q   +S   V YT +I +   +  V +A  +F  M+
Sbjct: 1544 KTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETML 1594



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 205/406 (50%)

Query: 187  AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
            A K+  ++L K S  D  +  VL+ G C    VEEGLKL E     G   +V+ Y+VL+ 
Sbjct: 1131 ARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLID 1190

Query: 247  SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
              C+ G +   L LL EME  G  P LVTY  LI  L K+  + K   L+ EM  +  SP
Sbjct: 1191 GYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSP 1250

Query: 307  NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
            N   + +++  LC+    T+A +    +  S C  D++ +N +I G    G++ +A    
Sbjct: 1251 NVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 1310

Query: 367  RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            R+ I + ++P+ +++  LI+GFC  G++  A  LL  +   G  P  VT+   ++     
Sbjct: 1311 REAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVA 1370

Query: 427  GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
            G +   L + ++M  + + P    Y V+I GLCK+  L  A  +LE+M    V PD+  Y
Sbjct: 1371 GKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVY 1430

Query: 487  NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
             T+I  F + ++L  A ++   M    + P   + N +I G C  G +  A   + ++++
Sbjct: 1431 ATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRK 1490

Query: 547  HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
                  +  YTT+I  +  +G+++ A+ + C M+++  + ++  Y+
Sbjct: 1491 VGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYS 1536



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 217/476 (45%), Gaps = 50/476 (10%)

Query: 69   VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
            +I+ L ++  L+       E   + F P+V   N+++   CK   A  A  +   M   G
Sbjct: 1223 LINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASG 1282

Query: 129  LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
              PD  ++N LI GLC  G + +A  F  +  R  + P+ ++Y+ L  GF +  ++  A 
Sbjct: 1283 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVAS 1342

Query: 189  KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
             ++ +++ +G  PD+VT+  LI G    G V E L +RE M  +    +V  Y+VL+S +
Sbjct: 1343 DLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1402

Query: 249  CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
            CK   +  A  +L EM    ++PD   Y+ LI G  + + +  A +++  M  K I P+ 
Sbjct: 1403 CKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDI 1462

Query: 309  FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  A++ G C+  M++EA +   ++    CI D   Y  +I GY K GN+  A++    
Sbjct: 1463 VSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCD 1522

Query: 369  LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
            +I+++  P++VT++SLI G+CK G    A  L   ++   L P+ VTYT  + +  ++  
Sbjct: 1523 MIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDK 1582

Query: 429  IQR--------------------------------------------------LLALLQE 438
            + R                                                  LL + ++
Sbjct: 1583 VLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKK 1642

Query: 439  METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
            +      P +  Y  +I  LC+   L+EA+     M   G  P+ IT+ +++  FC
Sbjct: 1643 LVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFC 1698



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 195/469 (41%), Gaps = 88/469 (18%)

Query: 21   KMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
            +M++     ++Q YNS++  L   R       +   +  S    ++ T + +I GLC + 
Sbjct: 1242 EMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEG 1301

Query: 78   RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
             ++ A  FL+E   +E  P+ +S   ++  +C  G   VA  L   M+  G  PD  ++ 
Sbjct: 1302 HVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFG 1361

Query: 138  ILIHGLCIAGSMEEAL-----------------------------------EFTNDMGRH 162
             LIHGL +AG + EAL                                       +M   
Sbjct: 1362 ALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEK 1421

Query: 163  GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
             V+PD   Y+ L  GF     +  A K+ + +  KG  PDIV+   +I GYCQ G + E 
Sbjct: 1422 NVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEA 1481

Query: 223  LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
            +     M   G   +   Y+ ++S   K G ++ AL  L +M     KP++VTYS LI G
Sbjct: 1482 ILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLING 1541

Query: 283  LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC-IQ 341
             CK      A  L+  M ++ +SPN   +  ++  L +K+ +  A +YF+++++++C   
Sbjct: 1542 YCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPN 1601

Query: 342  DVVL-------------------------------------------------YNIMIDG 352
            DV L                                                 YN +I  
Sbjct: 1602 DVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFS 1661

Query: 353  YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
              +   + EA+    ++ +K   P+ +TF SL+YGFC  GK  + R +L
Sbjct: 1662 LCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTIL 1710



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 19/204 (9%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
            Y++ G ++ A+  +  M +   K ++ TY+SL+        TD    L+ +++      N
Sbjct: 1507 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPN 1566

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLN------------AIMSRYCK 110
            V T +I+I  L ++ ++  A L+ +        P+ V+L+             I S  C 
Sbjct: 1567 VVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCN 1626

Query: 111  LGFAEVAKGLFCLMLKYGLH---PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
                     L  +  K       P   +YN +I  LC    + EAL+F N M + G  P+
Sbjct: 1627 TSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPN 1686

Query: 168  AITYSILAKGFHLLSQISGAWKVI 191
             IT+  L  GF  + + S  W+ I
Sbjct: 1687 PITFLSLLYGFCSVGK-SVNWRTI 1709


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 257/530 (48%), Gaps = 12/530 (2%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKV---SIQTYNSLLYNLRHTDIMW---DLYDDIKVSE 58
            ++R G    A+    + +  DL     +++ YN LL  L   +++     +YD+++ + 
Sbjct: 99  AFARAGAADRALKTFYRARH-DLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAG 157

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              NVYT +++I  LCQ  R+  A   L E A K   P  VS   I+S  CKL   + A+
Sbjct: 158 VEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEAR 217

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
           G+   M   G      SYN ++H LC    M E     ++M   G+ PD + Y+ +   F
Sbjct: 218 GILAEMTPVGA-----SYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAF 272

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               ++  A  ++ +++ +G  P++ T+TVL+ G+   G V + L +   M+++G+  + 
Sbjct: 273 CKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPST 332

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           I+Y+VL+  +C  G +  AL +   M      PD+ TYS LI G  K   +  A+ ++N+
Sbjct: 333 ISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWND 392

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M +    PN   +  ++  LC+K M  +A    D + + NC  + + +N +I     LG 
Sbjct: 393 MTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGR 452

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
            G A+ ++  +      P+  T+N L++G  + G   DA R+L  +  HG E S V+Y T
Sbjct: 453 AGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNT 512

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++  C+   I+  + LL  M  + I P   T+  +I   CK+  ++ A  +L  M  + 
Sbjct: 513 TISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVN 572

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
              + + Y +++   C    L  A   L +M    + P  AT+N+L+ G+
Sbjct: 573 CPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 114/489 (23%), Positives = 244/489 (49%), Gaps = 5/489 (1%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
            P+V   N ++    +         ++  M K G+ P+ ++YN+LI  LC    +  A  
Sbjct: 124 APTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARR 183

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
             ++M R G  PD ++++ +      L ++  A  ++ ++   G+     +Y  ++   C
Sbjct: 184 MLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGA-----SYNAVVHALC 238

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
               + E   + + M+ +G + + +AY+ ++ + CK+  +  A  +L  M   G  P++ 
Sbjct: 239 GQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQ 298

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           T+++L++G     KVH A+ ++N M ++  +P++ ++  ++ GLC    +  A   F  +
Sbjct: 299 TFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCM 358

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
             S+C+ DV  Y+ +IDG+ K G++  A+ ++  +      P++V + +++   CK    
Sbjct: 359 GKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMF 418

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
             A  L+D + L    P+ +T+ T + + C+ G   R L +   M      P   TY  +
Sbjct: 419 DQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNEL 478

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           + GL ++   ++A+++L +M   G     ++YNT I   C+ + +++A  LL +M +  +
Sbjct: 479 LHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGI 538

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
           +P + T+N +I   C  G+++ A  +L  +   N     VAYT+++   C++  +  AM 
Sbjct: 539 QPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMV 598

Query: 575 FFCQMVEKG 583
           +  +M+ +G
Sbjct: 599 YLLKMLYEG 607



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 222/453 (49%), Gaps = 12/453 (2%)

Query: 139 LIHGLCI---AGSMEEALEFTNDMGRHGV---EPDAITYSILAKGFHLLSQISGAWKVIQ 192
           L+  +C    AG+ + AL+ T    RH +    P    Y+ L       + ++    V  
Sbjct: 93  LVAAICAFARAGAADRALK-TFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYD 151

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
            +   G +P++ TY +LI   CQ   V    ++ + M  +G + + ++++ ++S++CK  
Sbjct: 152 NMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLD 211

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           R+DEA G+L EM  VG      +Y+ ++  LC Q ++ +   + +EM  + + P++ A+ 
Sbjct: 212 RLDEARGILAEMTPVG-----ASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYT 266

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           +I+   C+   +  A      ++   C+ +V  + +++ G+   G + +A+ ++  ++ +
Sbjct: 267 SIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAE 326

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
             +PS +++N LI G C  G +  A  +   +      P   TY+T ++ + + G++   
Sbjct: 327 GWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVA 386

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           +++  +M      P  V YT ++  LCK+    +A  L++ M +    P+ +T+NT+IRS
Sbjct: 387 MSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRS 446

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            C      +A  + + M  +   P   TYN L+ GL   G+ ++A  +L  +  H   L+
Sbjct: 447 LCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELS 506

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            V+Y T I   C    + +AM    +M+ +G +
Sbjct: 507 LVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQ 539



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 202/449 (44%), Gaps = 29/449 (6%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P +  Y  L+    +   V   + + + M   G + NV  Y++L+ ++C++ R+  A  +
Sbjct: 125 PTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRM 184

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L EM   G +PD V+++ +I  LCK D++ +A  +  EM     +P   ++ A++  LC 
Sbjct: 185 LDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM-----TPVGASYNAVVHALCG 239

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
           +  + E  +  D ++      D V Y  ++  + K   +  A  +  +++ +   P++ T
Sbjct: 240 QFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQT 299

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           F  L+ GF  +GKV DA  + + +   G  PS ++Y   +   C  G+++R L +   M 
Sbjct: 300 FTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMG 359

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
                P   TY+ +I G  K   L  A+ +  DM   G  P+ + Y  ++   CK     
Sbjct: 360 KSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFD 419

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +A  L+++M L N  P + T+N LI  LC  G    A  +   ++ +        Y  ++
Sbjct: 420 QAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELL 479

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDY--TKSFFCMMLSNGFPPDQEICEVMLIAF 618
                EG+   A+    +M+  GFE+S+  Y  T S  C M        + I E M++  
Sbjct: 480 HGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQM--------RMIKEAMIL-- 529

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                LG        MI  G+ PD F  N
Sbjct: 530 -----LGR-------MIIQGIQPDAFTFN 546


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 243/465 (52%), Gaps = 4/465 (0%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  ML+    P    +  ++  L         +     M  HG++ + IT +IL   +  
Sbjct: 37  FNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCH 96

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L QI+ A+ V  K+L  G  PDI+TYT LI G C  G V+E L   + ++SQG KL+ ++
Sbjct: 97  LRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVS 156

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y  L++ +CK G+   AL LL ++E    +PD+V Y+ +I GLCK   V  A  LY EM 
Sbjct: 157 YGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMF 216

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            KR+ PN   + +++ G C    + +A    + +++ N   +V  +N ++DG  K G + 
Sbjct: 217 EKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMR 276

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  L   ++++ + P + T+N+L+ G+    +   A+ + + +   G+     +Y+  +
Sbjct: 277 EAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMI 336

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +   +   +   + L + M  + + P  V Y+ +I GLCK  ++  A++ +++M+  G  
Sbjct: 337 SGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQP 396

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ ITY ++I + CK   + KA  LL ++    ++    TYNIL+DGLC +G L +A  +
Sbjct: 397 PNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKV 456

Query: 541 LVSL--QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
              L  + HN+ +  V Y+ +I   C E    +A+T   +M +KG
Sbjct: 457 FQDLLMKGHNVDV--VTYSIMINGLCKESLFDEALTLLSKMEDKG 499



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 232/430 (53%)

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
           ++LN +++ YC L     A  +F  +LK G  PD  +Y  LI GLC+ G ++E+L F + 
Sbjct: 85  ITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDR 144

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           +   G++ D ++Y  L  G   + Q   A ++++K+  +   PD+V Y  +I G C+   
Sbjct: 145 LVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKL 204

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           V +   L   M  +    NV+ Y+ L+   C  G++D+A GLL EM    + P++ T++ 
Sbjct: 205 VRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNT 264

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           L+ GLCK+ K+ +A  L   M  + + P+ F + A++ G    +   +A+  F+ +    
Sbjct: 265 LVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMG 324

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              DV  Y++MI G  K+  + EA+ L+  +  + + P +V ++SLI G CK+G++  A 
Sbjct: 325 VTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSAL 384

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           + +D +   G  P+ +TYT+ ++A C+   + + +ALL++++ + I     TY +++ GL
Sbjct: 385 KYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGL 444

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK  +L +A ++ +D+ + G   D +TY+ +I   CK     +A  LL++M      P +
Sbjct: 445 CKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDA 504

Query: 519 ATYNILIDGL 528
             Y  +I+  
Sbjct: 505 IAYETIINAF 514



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 220/466 (47%), Gaps = 36/466 (7%)

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
           H + P++ T  +    FH L  ++ A     ++L     P I+ +  ++    +  +   
Sbjct: 9   HSIIPNS-TLLLSHTHFHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPI 67

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            + L + M   G + N I  ++L++S C   +I+ A  +  ++  +G +PD++TY+ LIR
Sbjct: 68  VIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIR 127

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           GLC   +V +++  ++ + S+ I  +  ++G ++ GLC+      A      +    C  
Sbjct: 128 GLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRP 187

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           DVV+YN +IDG  K   + +A  LY ++ EKR+ P++VT+ SLIYGFC  G++  A  LL
Sbjct: 188 DVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLL 247

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT----------- 450
           + + L  + P+  T+ T ++  C+EG ++   +L+  M  + +GP   T           
Sbjct: 248 NEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLV 307

Query: 451 ------------------------YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
                                   Y+V+I GL K   L EA+ L E M    V PD + Y
Sbjct: 308 KEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAY 367

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           +++I   CK   +  A + +++M      P   TY  LID LC +  +  A  LL  +++
Sbjct: 368 SSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKD 427

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             I      Y  ++   C +G +  A   F  ++ KG  + +  Y+
Sbjct: 428 QGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYS 473



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 188/367 (51%), Gaps = 3/367 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVY 64
           + G    A+ ++ K++    +  +  YN+++  L    ++   +DLY ++       NV 
Sbjct: 166 KIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVV 225

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I G C   +L  A   L E   K   P+V + N ++   CK G    AK L  +M
Sbjct: 226 TYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVM 285

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +K G+ PD F+YN L+ G  +     +A    N M + GV  D  +YS++  G   +  +
Sbjct: 286 MKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKML 345

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  + + +  +   PD+V Y+ LI G C+ G +   LK  + M  +G   NVI Y+ L
Sbjct: 346 DEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSL 405

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           + ++CKS ++D+A+ LL +++  G++ ++ TY+IL+ GLCK  ++  A +++ ++  K  
Sbjct: 406 IDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGH 465

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           + +   +  ++ GLC++ +  EA      +    C+ D + Y  +I+ + +     +A +
Sbjct: 466 NVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEK 525

Query: 365 LYRQLIE 371
           L R++I+
Sbjct: 526 LLREMID 532



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 127/292 (43%), Gaps = 20/292 (6%)

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           L N+ +A+  + +++  R  P I+ F  ++    K         L   ++LHG++ + +T
Sbjct: 27  LPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYIT 86

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
               +N+YC    I    ++  ++      P  +TYT +I+GLC   +++E++   + + 
Sbjct: 87  LNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLV 146

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G+  D ++Y T+I   CK      A +LL ++      P    YN +IDGLC +  ++
Sbjct: 147 SQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVR 206

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF 595
           +A  L   + E  +    V YT++I   C  G + KA     +MV K             
Sbjct: 207 DAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVN---------- 256

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                     P+      ++    + G +     L AVM+K G+ PD F  N
Sbjct: 257 ----------PNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYN 298


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/661 (24%), Positives = 306/661 (46%), Gaps = 29/661 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNS-----LLYNLRHTDIMWDLYDDIKVSETP 60
           Y R GMV  AV   A M ++   VSI  Y +     LL +    D++ + Y+     E  
Sbjct: 150 YCRNGMVDRAVDTFAWMSKMG--VSISHYAASEMLDLLIDSDRIDVILENYE-----EMC 202

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           + +     V +   ++  ++  + F +    +   P +V  N I+   C      VA   
Sbjct: 203 KGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDF 262

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F +M++ G  P+  +++ LI+  C    ++EA    N M   G+ PD + YSIL  G   
Sbjct: 263 FDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFR 322

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             ++     +    L +G   D+V ++ ++  Y ++G++ + +++   ML +G   NV+ 
Sbjct: 323 AGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVT 382

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS+L++ +C++GR+ EA G+  ++   GL+P ++TYS LI G CK + +     LY  M 
Sbjct: 383 YSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIML 442

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K   P+      ++ GL  + M+ EA  +F   +      +  L+N +IDG  +L    
Sbjct: 443 RKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTR 502

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           + +++Y  +   ++ P +VT+  L+ G  + G++ +A  L   +   G  P  + Y T +
Sbjct: 503 DGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLI 562

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + +C++ +    L + + M++  I P    Y V+I    ++  ++  ++LL ++   G+ 
Sbjct: 563 DGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLE 622

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +TYNT+I  +C  K   KA +L   +     +P + T+ ILID  C +G + +A  +
Sbjct: 623 PDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLI 682

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY--------- 591
             S+ E       + Y+ +I  +    +   A   + +M+      +I  Y         
Sbjct: 683 FSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCK 742

Query: 592 -------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                  + +F C  +     PD     +++  + + G L     L   M+ +G++PD  
Sbjct: 743 KGLMEEASLAFQC-AIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDL 801

Query: 645 L 645
           L
Sbjct: 802 L 802



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 210/508 (41%), Gaps = 81/508 (15%)

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK---- 270
           Q GN+E   +      + G   + + YS LL   C++G +D A+     M  +G+     
Sbjct: 118 QFGNLEVLGEFHGSFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHY 176

Query: 271 --------------------------PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
                                       L  Y  +     K+ +V K +  +  +  + +
Sbjct: 177 AASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGL 236

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P       IL GLC    I  A  +FD ++ S    ++V ++ +I+ Y K   + EA  
Sbjct: 237 VPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFS 296

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           LY  +IEK I P +V ++ LI G  + GK+ +   L       G++   V +++ M+AY 
Sbjct: 297 LYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYV 356

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             G++ + + +   M  + I P  VTY+++I GLC+  ++ EA  +   +   G+ P  +
Sbjct: 357 RVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVL 416

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TY+++I  FCK ++LR  F L   M      P     ++LI+GL   G +  A       
Sbjct: 417 TYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQA 476

Query: 545 QEHNISLTK-----------------------------------VAYTTIIKAHCAEGDV 569
            +  ++L                                     V YT ++K    +G +
Sbjct: 477 VKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRL 536

Query: 570 HKAMTFFCQMVEKGFEIS-------IRDYTK--------SFFCMMLSNGFPPDQEICEVM 614
            +A+  F Q+++KGF          I  + K          F +M SNG  PD  I  V+
Sbjct: 537 DEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVL 596

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +  F + G + +V EL   +IK GL PD
Sbjct: 597 INMFFREGCVENVLELLREIIKYGLEPD 624


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/580 (27%), Positives = 272/580 (46%), Gaps = 15/580 (2%)

Query: 31  IQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA 90
           ++  N+LL  L    +  D+ + +      RN+ T + +I+  C    +  A   L    
Sbjct: 41  LRCLNTLLMALARHRMFPDM-ESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLL 99

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
                P   +  + +  YC+ G    A  +F LM   G    AF+Y  L+HGL  AG + 
Sbjct: 100 HAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVR 159

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           EA+     M      PD   Y+ +  G     +   A  ++++ +  G +P+IV Y  LI
Sbjct: 160 EAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALI 219

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            GYC  G +E  LK+ E M       NV  Y+ L+  +CKSG+++ A+ L   M   GL+
Sbjct: 220 DGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLE 279

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P++VTY+ LI+G C +  +  A +L + M +  + PN +    ++  LC++E + EA+++
Sbjct: 280 PNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLF 339

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
             SL+      + V+Y  +IDG  K G I  A +L +++I +   P   +++SLI G C+
Sbjct: 340 LGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCR 399

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
             K++ A  +L+ +   G++ S VTYT  ++    E   +    +  +M    I P  VT
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVT 459

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           YTV ++  C++ ++++A  ++  M   GV P+ +TYNT+IR +     + +AF     M 
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519

Query: 511 LHNLEPTSATYNILIDGLCVN-------------GDLKNADCLLVSLQEHNISLTKVAYT 557
               +P   +Y +L+  L V               D+K+   LL  + E  + L    Y+
Sbjct: 520 GKGWKPNEDSYTVLLR-LVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYS 578

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             I+  C    + +A  FF  M       S   YT    C
Sbjct: 579 CFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDC 618


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 149/526 (28%), Positives = 260/526 (49%), Gaps = 9/526 (1%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I++ G C +     A     +   ++  P++ +   +M  +C +   + A  L   M K+
Sbjct: 191 ILVSGNCHKV----AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH 246

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  P++  Y  LIH L     + EAL+   +M   G  PDA T++ +  G     +I+ A
Sbjct: 247 GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEA 306

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            K++ ++LI+G  PD +TY  L+ G C+IG V+    L      +  K  ++ ++ L+  
Sbjct: 307 AKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL----FYRIPKPEIVIFNTLIHG 362

Query: 248 MCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
               GR+D+A  +L +M  + G+ PD+ TY+ LI G  K+  V  A+++ ++M +K   P
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N +++  ++ G C+   I EA    + +       + V +N +I  + K   I EAV+++
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           R++  K   P + TFNSLI G C+  ++  A  LL  +   G+  + VTY T +NA+   
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G I+    L+ EM  +      +TY  +IKGLC+  ++ +A  L E M   G  P  I+ 
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           N +I   C+   + +A +   +M L    P   T+N LI+GLC  G +++   +   LQ 
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             I    V + T++   C  G V+ A     + +E GF  + R ++
Sbjct: 663 EGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 139/542 (25%), Positives = 267/542 (49%), Gaps = 10/542 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPR 61
           Y + G       ++ +M+ +   + + ++YN +L  L   +   +  +++ D+   + P 
Sbjct: 156 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP 215

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            ++T  +V+   C  + +  A+  L++       P+ V    ++    K      A  L 
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G  PDA ++N +I GLC    + EA +  N M   G  PD ITY  L  G   +
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LREVMLSQGFKLNVIA 240
            ++  A    + L  +   P+IV +  LI G+   G +++    L +++ S G   +V  
Sbjct: 336 GRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+    K G +  AL +L++M   G KP++ +Y+IL+ G CK  K+ +A  + NEM 
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +  + PN+     ++   C++  I EA   F  +    C  DV  +N +I G  ++  I 
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A+ L R +I + +  + VT+N+LI  F + G++ +AR+L++ +   G     +TY + +
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
              C  G + +  +L ++M      P++++  ++I GLC+   ++EAV+  ++M + G T
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +T+N++I   C+   +     +  ++    + P + T+N L+  LC  G + +A CL
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA-CL 690

Query: 541 LV 542
           L+
Sbjct: 691 LL 692



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 223/462 (48%), Gaps = 25/462 (5%)

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  V   +L +   P + T+ V++  +C +  ++  L L   M   G   N + Y  L+ 
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           S+ K  R++EAL LL EM  +G  PD  T++ +I GLCK D++++A ++ N M  +  +P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +G ++ GLC+   +  A+  F  +       ++V++N +I G+V  G + +A  + 
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVL 376

Query: 367 RQLIEKR-ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++    I P + T+NSLIYG+ K G V  A  +L  ++  G +P+  +YT  ++ +C+
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G I     +L EM    + P  V +  +I   CK+ ++ EAV++  +M   G  PD  T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           +N++I   C+  +++ A  LL  M    +   + TYN LI+     G++K A  L+  + 
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
                L ++ Y ++IK  C  G+V KA                    +S F  ML +G  
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKA--------------------RSLFEKMLRDGHA 596

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           P    C +++    + G +    E    M+  G  PD    N
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 215/434 (49%), Gaps = 40/434 (9%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           VI GLC+  R+ +A   +     + F P  ++   +M+  CK+G  + AK LF  + K  
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-- 350

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLLSQISGA 187
             P+   +N LIHG    G +++A    +DM   +G+ PD  TY+ L  G+     +  A
Sbjct: 351 --PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            +V+  +  KG  P++ +YT+L+ G+C++G ++E   +   M + G K N + ++ L+S+
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            CK  RI EA+ +  EM   G KPD+ T++ LI GLC+ D++  A+ L  +M S+ +  N
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528

Query: 308 S-----------------------------------FAHGAILLGLCEKEMITEARMYFD 332
           +                                     + +++ GLC    + +AR  F+
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            ++        +  NI+I+G  + G + EAV+  ++++ +  +P IVTFNSLI G C+ G
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           ++ D   +   ++  G+ P  VT+ T M+  C+ G +     LL E       P H T++
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708

Query: 453 VVIKGLCKQWKLQE 466
           ++++ +  Q  L  
Sbjct: 709 ILLQSIIPQETLDR 722



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 193/374 (51%), Gaps = 4/374 (1%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVA 117
           P  V  N++ I G     RL DA   L +     +G  P V + N+++  Y K G   +A
Sbjct: 351 PEIVIFNTL-IHGFVTHGRLDDAKAVLSDMV-TSYGIVPDVCTYNSLIYGYWKEGLVGLA 408

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             +   M   G  P+ +SY IL+ G C  G ++EA    N+M   G++P+ + ++ L   
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    +I  A ++ +++  KG  PD+ T+  LI G C++  ++  L L   M+S+G   N
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + Y+ L+++  + G I EA  L+ EM   G   D +TY+ LI+GLC+  +V KA  L+ 
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M     +P++ +   ++ GLC   M+ EA  +   +++     D+V +N +I+G  + G
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            I + + ++R+L  + I P  VTFN+L+   CK G V DA  LLD     G  P+  T++
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708

Query: 418 TFMNAYCEEGNIQR 431
             + +   +  + R
Sbjct: 709 ILLQSIIPQETLDR 722



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 171/360 (47%), Gaps = 39/360 (10%)

Query: 10  GMVHDAVFVIAKM-KELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYT 65
           G + DA  V++ M     +   + TYNSL+Y      ++    ++  D++      NVY+
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            +I++DG C+  ++ +A   L E +     P+ V  N ++S +CK      A  +F  M 
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G  PD +++N LI GLC    ++ AL    DM   GV  + +TY+ L   F    +I 
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546

Query: 186 GAWKVIQKLLIKGSDPDIVTYT-----------------------------------VLI 210
            A K++ +++ +GS  D +TY                                    +LI
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C+ G VEE ++ ++ M+ +G   +++ ++ L++ +C++GRI++ L +  +++A G+ 
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD VT++ L+  LCK   V+ A  L +E       PN      +L  +  +E +   R Y
Sbjct: 667 PDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFY 726



 Score = 39.3 bits (90), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 41/198 (20%), Positives = 83/198 (41%), Gaps = 21/198 (10%)

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y V+I  L    + +   +LL  M   G+   +  + +I+R + K     +  +L+ +M 
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173

Query: 511 -LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
            +++ EPT  +YN++++ L      K A  +   +    I  T   +  ++KA CA  ++
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
             A++             +RD TK        +G  P+  I + ++ +  +   +    +
Sbjct: 234 DSALSL------------LRDMTK--------HGCVPNSVIYQTLIHSLSKCNRVNEALQ 273

Query: 630 LAAVMIKSGLLPDKFLIN 647
           L   M   G +PD    N
Sbjct: 274 LLEEMFLMGCVPDAETFN 291


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 167/622 (26%), Positives = 293/622 (47%), Gaps = 47/622 (7%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLY----NLRHTDIMWDLYDDIKVSETPRNVYT 65
           G +  A  +I KMK   L  ++ TYN++L+      R    M  L +D++ +    +VYT
Sbjct: 239 GNLKGAKHMIHKMKSCSLP-NVITYNTILHWYVKKGRFKAAMCVL-EDMEKNGVEADVYT 296

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            +I+ID LC+  R   A L L+   G    P   + N ++  +       +A  +F  ML
Sbjct: 297 YNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEML 356

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + GL P   +Y  LI G C  G+++EAL    +M   GV+P  +TYS +  G      + 
Sbjct: 357 RQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNG-----SVH 411

Query: 186 GAWKVIQKLLIKGSDPDIVTY-----------------------------------TVLI 210
            A+ V   +   G  PD+ TY                                     L+
Sbjct: 412 EAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALL 471

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C  G+++E L L E M++  F  ++  Y++LLS  C+ G+I  A+ LL  M   GL 
Sbjct: 472 LGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLV 531

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNE-MCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           PD+VTY+ L++GL K+ +V  A  L+ E +C + +  +  A+ +++ G  +   + +  M
Sbjct: 532 PDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEM 591

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               +  +    +   YNI++ G++K G++  ++ LY+ ++ K I P+ VT+  LI G  
Sbjct: 592 TIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLS 651

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K+G +  A + LD + L G+ P  +++   +NA+ E+  +   L L   M+   + P+  
Sbjct: 652 KHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSK 711

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY+ +I GL ++  LQ +  +L DM   G+ P    Y  +I + C+  D+  AF+L  +M
Sbjct: 712 TYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEM 771

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               + P     + ++ GL   G ++    +  S+    +  T   +TT++   C E  +
Sbjct: 772 TALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKI 831

Query: 570 HKAMTFFCQMVEKGFEISIRDY 591
             A+     M   G +I +  Y
Sbjct: 832 SDALHLKSLMESCGLKIDVVTY 853



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 169/661 (25%), Positives = 301/661 (45%), Gaps = 94/661 (14%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           V++ L +    +    FL+E   ++F   V + N +++  C  G  + AK +   M    
Sbjct: 196 VLNALVEIGESKHVWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCS 255

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           L P+  +YN ++H     G  + A+    DM ++GVE D  TY+I+      + + + A+
Sbjct: 256 L-PNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAY 314

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            +++++      PD  TY  LI G+     +   + +   ML QG K ++  Y+ L+   
Sbjct: 315 LLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGY 374

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C++G IDEAL +LYEM+  G+KP  VTYS ++ G      VH+A  +Y+ M     SP+ 
Sbjct: 375 CRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNG-----SVHEAFSVYDNMEKYGCSPDV 429

Query: 309 FAHGAILLGLCEKEMITEARMYF-----------------------------------DS 333
           + +  +L GLC+   + +A+ +                                    + 
Sbjct: 430 YTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEK 489

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++  N I D+  Y I++ G+ + G I  AV L + ++EK + P IVT+  L+ G  K G+
Sbjct: 490 MVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQ 549

Query: 394 VADARRLLDTI------------------------KLHGLE------------PSAVTYT 417
           V  A  L   I                        KLH +E            P+  +Y 
Sbjct: 550 VKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYN 609

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             M+ + ++G++ R + L ++M  K I PT+VTY ++I GL K   ++ AV+ L+ M + 
Sbjct: 610 ILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLE 669

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM-WLHNLEPTSATYNILIDGLCVNGDLKN 536
           G+ PD+++++ +I +F +   +  A QL N M WL+ + P+S TY+ +I+GL     L++
Sbjct: 670 GIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLY-MSPSSKTYSAMINGLIRKNWLQH 728

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF---EIS----IR 589
           +  +L  + E  +      Y  +I A C  GD++ A     +M   G    E++    +R
Sbjct: 729 SCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVR 788

Query: 590 DYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
             +K          FC ++  G  P       ++    +   +     L ++M   GL  
Sbjct: 789 GLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKI 848

Query: 642 D 642
           D
Sbjct: 849 D 849



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 153/586 (26%), Positives = 278/586 (47%), Gaps = 38/586 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y R G + +A+ V+ +M+   +K S  TY+++L    H    + +YD+++      +VYT
Sbjct: 374 YCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNGSVHE--AFSVYDNMEKYGCSPDVYT 431

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
              ++ GLC+   L  A         KEF   +V + + +                    
Sbjct: 432 YRNLLRGLCKGGHLVQA---------KEFMSCIVHIPSAI-------------------- 462

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
                 D  + N L+ G+C  GS++EAL+    M      PD  TY+IL  GF    +I 
Sbjct: 463 ------DQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIV 516

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQGFKLNVIAYSVL 244
            A  ++Q +L KG  PDIVTYT L+ G  + G V+    L +E++  +G   + IAY+ +
Sbjct: 517 PAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSM 576

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++   K+G++ +    +Y+M    + P+  +Y+IL+ G  K+  + ++I LY +M  K I
Sbjct: 577 MNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGI 636

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P +  +  ++LGL +  MI  A  + D +++     D + ++++I+ + +   + +A+Q
Sbjct: 637 KPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQ 696

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+  +    +SPS  T++++I G  +   +  +  +L  +   GLEP    Y   +NA C
Sbjct: 697 LFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKC 756

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             G+I     L +EM    I P  V  + +++GL K  K++E + +   +   G+ P   
Sbjct: 757 RFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIA 816

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           T+ T++   CK   +  A  L + M    L+    TYN+LI GLC    + +A  L   +
Sbjct: 817 TFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEM 876

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
           +   +      YTT+ +A    G   +       + ++G   S  D
Sbjct: 877 KSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPSYTD 922



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 156/357 (43%), Gaps = 25/357 (7%)

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY--NIMIDGYVKLGNIG 360
           R   N      ++    +++ + +A M    L M NC      +  N +++  V++G   
Sbjct: 150 RCDSNPLVFDLLVNAYVKEKRVVDASMAI--LFMDNCGFKASAHACNAVLNALVEIGESK 207

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
                 ++ + ++    + T N ++   C  G +  A+ ++  +K   L P+ +TY T +
Sbjct: 208 HVWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSL-PNVITYNTIL 266

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + Y ++G  +  + +L++ME   +     TY ++I  LCK  +   A  LL+ M    + 
Sbjct: 267 HWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLA 326

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD+ TYNT+I+ F     +  A  + N+M    L+P+ ATY  LIDG C NG +  A  +
Sbjct: 327 PDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRV 386

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY--------- 591
           L  +Q   +  ++V Y+ ++      G VH+A + +  M + G    +  Y         
Sbjct: 387 LYEMQVAGVKPSEVTYSAML-----NGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCK 441

Query: 592 ------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                  K F   ++      DQ+    +L+     G L    +L   M+    +PD
Sbjct: 442 GGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPD 498



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 12/261 (4%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETP 60
            +S    + DA+ +   MK L +  S +TY++++  L   + +      L D ++    P
Sbjct: 684 AFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEP 743

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           ++ +  ++ I+  C+   +  A    +E       P+ V+ ++I+    K G  E    +
Sbjct: 744 KHTHYIAL-INAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIV 802

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           FC +++ G+ P   ++  L+HGLC    + +AL   + M   G++ D +TY++L  G   
Sbjct: 803 FCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCK 862

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +  +S A ++ +++  KG  P++ TYT L       G   EG KL   +  +G    V +
Sbjct: 863 IQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGL---VPS 919

Query: 241 YSVLLSSMCKSGRIDEALGLL 261
           Y    +  C   R++ A+  L
Sbjct: 920 Y----TDQCPEWRMENAMDRL 936


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 236/454 (51%), Gaps = 1/454 (0%)

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           + H  C +G+  E+L     M R G  PD I  + L KGF  L  I  A +V++ +L K 
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKF 153

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD+  Y  LI G+C++  +++  ++ + M S+ F  + + Y++++ S+C  G++D AL
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +L ++ +   +P ++TY+ILI     +  V +A++L +EM S+ + P+ F +  I+ G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++ M+  A     +L +  C  DV+ YNI++   +  G   E  +L  ++  ++  P++
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VT++ LI   C++GK+ +A  LL  +K  GL P A +Y   + A+C EG +   +  L+ 
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M +    P  V Y  V+  LCK  K  +A+++   +  +G +P+  +YNT+  +     D
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
             +A  ++ +M  + ++P   TYN +I  LC  G +  A  LLV ++      + V Y  
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           ++   C    +  A+     MV  G   +   YT
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 225/459 (49%), Gaps = 1/459 (0%)

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           C+     +++  L+    K + P V+    ++  +  L     A  +  ++ K+G  PD 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
           F+YN LI+G C    +++A    + M      PD +TY+I+        ++  A KV+ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           LL     P ++TYT+LI      G V+E LKL + MLS+G K ++  Y+ ++  MCK G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +D A  ++  +E  G +PD+++Y+IL+R L  Q K  +  +L  +M S++  PN   +  
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++  LC    I EA      +       D   Y+ +I  + + G +  A++    +I   
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
             P IV +N+++   CKNGK   A  +   +   G  P++ +Y T  +A    G+  R L
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            ++ EM +  I P  +TY  +I  LC++  + EA +LL DM      P  +TYN ++  F
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           CK   +  A  +L  M  +   P   TY +LI+G+   G
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 222/446 (49%), Gaps = 11/446 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+  + +I+G C+ +R+ DA   L     K+F P  V+ N ++   C  G  ++A  + 
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +L     P   +Y ILI    + G ++EAL+  ++M   G++PD  TY+ + +G    
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A+++++ L +KG +PD+++Y +L+      G  EEG KL   M S+    NV+ Y
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S+L++++C+ G+I+EA+ LL  M+  GL PD  +Y  LI   C++ ++  AI+    M S
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               P+   +  +L  LC+     +A   F  L    C  +   YN M       G+   
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ +  +++   I P  +T+NS+I   C+ G V +A  LL  ++     PS VTY   + 
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C+   I+  + +L+ M      P   TYTV+I+G+       EA++L  D+  I    
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI---- 572

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLN 507
           D I+  +  R       L + F LLN
Sbjct: 573 DAISEYSFKR-------LHRTFPLLN 591



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 226/419 (53%), Gaps = 1/419 (0%)

Query: 92  KEFG-PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
           ++FG P V + NA+++ +CK+   + A  +   M      PD  +YNI+I  LC  G ++
Sbjct: 151 EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            AL+  N +     +P  ITY+IL +   L   +  A K++ ++L +G  PD+ TY  +I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C+ G V+   ++   +  +G + +VI+Y++LL ++   G+ +E   L+ +M +    
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P++VTYSILI  LC+  K+ +A+ L   M  K ++P+++++  ++   C +  +  A  +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            +++I   C+ D+V YN ++    K G   +A++++ +L E   SP+  ++N++      
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           +G    A  ++  +  +G++P  +TY + ++  C EG +     LL +M +    P+ VT
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           Y +V+ G CK  ++++A+ +LE M   G  P++ TY  +I          +A +L N +
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 214/445 (48%), Gaps = 16/445 (3%)

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+ GN  E L L E M+ +G+  +VI  + L+        I +A+ ++  +E  G +PD+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
             Y+ LI G CK +++  A ++ + M SK  SP++  +  ++  LC +  +  A    + 
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L+  NC   V+ Y I+I+  +  G + EA++L  +++ + + P + T+N++I G CK G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V  A  ++  ++L G EP  ++Y   + A   +G  +    L+ +M ++   P  VTY++
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I  LC+  K++EA+ LL+ M   G+TPD  +Y+ +I +FC+   L  A + L  M    
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
             P    YN ++  LC NG    A  +   L E   S    +Y T+  A  + GD  +A+
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAF 618
               +M+  G +     Y     C+               M S  F P      ++L+ F
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDK 643
            +   +     +   M+ +G  P++
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNE 543



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 184/414 (44%), Gaps = 51/414 (12%)

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C+SG   E+L LL  M   G  PD++  + LI+G      + KA+++  E+  K   P+ 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           FA                                   YN +I+G+ K+  I +A ++  +
Sbjct: 159 FA-----------------------------------YNALINGFCKMNRIDDATRVLDR 183

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  K  SP  VT+N +I   C  GK+  A ++L+ +     +P+ +TYT  + A   EG 
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +   L L+ EM ++ + P   TY  +I+G+CK+  +  A +++ ++ + G  PD I+YN 
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           ++R+        +  +L+ +M+    +P   TY+ILI  LC +G ++ A  LL  ++E  
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--------------- 593
           ++    +Y  +I A C EG +  A+ F   M+  G    I +Y                 
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             F  +   G  P+      M  A    GD      +   M+ +G+ PD+   N
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 153/312 (49%), Gaps = 3/312 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G V +A+ ++ +M    LK  + TYN+++  +      D  +++  ++++     +V + 
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I++  L  Q + ++    + +   ++  P+VV+ + +++  C+ G  E A  L  LM +
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL PDA+SY+ LI   C  G ++ A+EF   M   G  PD + Y+ +        +   
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A ++  KL   G  P+  +Y  +       G+    L +   M+S G   + I Y+ ++S
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C+ G +DEA  LL +M +    P +VTY+I++ G CK  ++  AI +   M      P
Sbjct: 482 CLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRP 541

Query: 307 NSFAHGAILLGL 318
           N   +  ++ G+
Sbjct: 542 NETTYTVLIEGI 553



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 34/190 (17%)

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI------------ 484
           ++  ++++G        +    C+     E++ LLE M   G  PD I            
Sbjct: 78  RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137

Query: 485 ----------------------TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
                                  YN +I  FCK   +  A ++L++M   +  P + TYN
Sbjct: 138 RNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 197

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           I+I  LC  G L  A  +L  L   N   T + YT +I+A   EG V +A+    +M+ +
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257

Query: 583 GFEISIRDYT 592
           G +  +  Y 
Sbjct: 258 GLKPDMFTYN 267


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 238/450 (52%)

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
           F +N ++  L        A+ F+  M    ++PD  T++IL   F  L  ++ A+ V+ K
Sbjct: 65  FEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAK 124

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +   G  PD VT T LI G C  G V E L   + ++++GF L+ ++Y  L++ +CK+G 
Sbjct: 125 IFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGE 184

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
              AL +L +++ + ++P++V Y+ +I  LCK   V  A  L +EM  KRI P+   +  
Sbjct: 185 TRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTT 244

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++ G      + EA   F+ +++ N   DV  +NI++DG  K G + +A  +   +I++ 
Sbjct: 245 LIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQG 304

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           +  +IVT+NSL+ G+    +   A  + +T+   G+ P   +Y+  +N  C+   +   +
Sbjct: 305 VDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAV 364

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            L +EM +K++ P  VTY  +I GL K  ++ +A  L+ +M+  G   D ITY++++ + 
Sbjct: 365 NLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDAL 424

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           CK   + KA  L+ ++    ++P   TY IL+DGLC NG LK+A  +   L      L  
Sbjct: 425 CKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDV 484

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             Y  ++   C EG   +A++   +M + G
Sbjct: 485 KMYNVMVNGLCKEGLFDEALSLVSKMEDNG 514



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 239/463 (51%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++  L + +    AI F ++   K+  P + + N +++ +C LG    A  +   + K G
Sbjct: 70  ILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLG 129

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
            HPD  +   LI GLC+ G + EAL F +D+   G   D ++Y  L  G     +   A 
Sbjct: 130 FHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAAL 189

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +V++K+      P++V Y  +I   C+   V     L   M+ +    +V+ Y+ L+   
Sbjct: 190 QVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGC 249

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
              GR+ EA+GL  +M    +KPD+ T++IL+ GLCK+ ++ KA  +   M  + +  N 
Sbjct: 250 LIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNI 309

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             + +++ G    +   +A   F+++       DV  Y+IMI+G  K   + EAV L+++
Sbjct: 310 VTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKE 369

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  K ++P+ VT+NSLI G  K G+++DA  L++ +   G     +TY++ ++A C+   
Sbjct: 370 MHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQ 429

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           + + + L+ +++ + I P   TYT+++ GLCK  +L++A  + +D+ + G   D   YN 
Sbjct: 430 VDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNV 489

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
           ++   CK     +A  L+++M  +   P + TY  L+  L  N
Sbjct: 490 MVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFEN 532



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 230/493 (46%), Gaps = 16/493 (3%)

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
           R+ V+P    ++ +      L+    A    +++ +K   PD+ T+ +LI  +C +G++ 
Sbjct: 58  RNPVQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLN 116

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
               +   +   GF  + +  + L+  +C +G++ EAL    ++ A G   D V+Y  LI
Sbjct: 117 FAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLI 176

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
            GLCK  +   A+Q+  ++    + PN   +  I+  LC+ +++  A      +I+    
Sbjct: 177 NGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIF 236

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            DVV Y  +I G + +G + EAV L+ Q++ K I P + TFN L+ G CK G++  AR +
Sbjct: 237 PDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNV 296

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L  +   G++ + VTY + M+ Y       +   +   M  + + P   +Y+++I GLCK
Sbjct: 297 LAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCK 356

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
              + EAV L ++M+   + P+ +TYN++I    K   +  A+ L+N+M          T
Sbjct: 357 TKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVIT 416

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y+ L+D LC N  +  A  L+  +++  I      YT ++   C  G +  A   +  ++
Sbjct: 417 YSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLL 476

Query: 581 EKGFEISIR---------------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
            KG+ + ++               D   S    M  NG  PD    E ++ A  +     
Sbjct: 477 IKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKND 536

Query: 626 SVFELAAVMIKSG 638
              +L   MI  G
Sbjct: 537 KAVKLLREMIVQG 549



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 234/501 (46%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           +   N I+S   KL     A      M    + PD F++NILI+  C  G +  A     
Sbjct: 64  IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            + + G  PD +T + L KG  L  ++  A      ++ KG   D V+Y  LI G C+ G
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTG 183

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
                L++   +     + NV+ Y+ ++ S+CK   +  A  L  EM    + PD+VTY+
Sbjct: 184 ETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYT 243

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            LI G     ++ +A+ L+N+M  K I P+ +    ++ GLC++  + +AR     +I  
Sbjct: 244 TLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQ 303

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
               ++V YN ++DGY  +    +A  ++  +  + ++P + +++ +I G CK   V +A
Sbjct: 304 GVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEA 363

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             L   +    + P+ VTY + ++   + G I     L+ EM  +      +TY+ ++  
Sbjct: 364 VNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDA 423

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LCK  ++ +A+ L+  +   G+ P+  TY  ++   CK   L+ A  +   + +      
Sbjct: 424 LCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLD 483

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
              YN++++GLC  G    A  L+  ++++      V Y T+++A        KA+    
Sbjct: 484 VKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLR 543

Query: 578 QMVEKGFEISIRDYTKSFFCM 598
           +M+ +G  +     + S  C+
Sbjct: 544 EMIVQGSAVGSNISSNSMLCV 564



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 182/347 (52%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   + +ID LC+   +  A     E   K   P VV+   ++     +G  + A GLF
Sbjct: 203 NVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLF 262

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML   + PD +++NIL+ GLC  G M++A      M + GV+ + +TY+ L  G+ L+
Sbjct: 263 NQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLV 322

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            Q + A  V   +  +G  PD+ +Y+++I G C+   V+E + L + M S+    N + Y
Sbjct: 323 KQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTY 382

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+  + K GRI +A  L+ EM   G   D++TYS L+  LCK  +V KAI L  ++  
Sbjct: 383 NSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKD 442

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + I PN + +  ++ GLC+   + +A+  +  L++     DV +YN+M++G  K G   E
Sbjct: 443 QGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDE 502

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           A+ L  ++ +    P  VT+ +L+    +N K   A +LL  + + G
Sbjct: 503 ALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 187/366 (51%), Gaps = 3/366 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVY 64
           +TG    A+ V+ K+  L ++ ++  YN+++ +L    ++    DL  ++ V     +V 
Sbjct: 181 KTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVV 240

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I G     RL++A+    +   K   P V + N ++   CK G  + A+ +  +M
Sbjct: 241 TYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVM 300

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +K G+  +  +YN L+ G  +     +A    N M R GV PD  +YSI+  G      +
Sbjct: 301 IKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMV 360

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  + +++  K   P+ VTY  LI G  + G + +   L   M ++G   +VI YS L
Sbjct: 361 DEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSL 420

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L ++CK+ ++D+A+ L+ +++  G++P++ TY+IL+ GLCK  ++  A  +Y ++  K  
Sbjct: 421 LDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGY 480

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             +   +  ++ GLC++ +  EA      +  + CI D V Y  ++    +     +AV+
Sbjct: 481 HLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVK 540

Query: 365 LYRQLI 370
           L R++I
Sbjct: 541 LLREMI 546



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 133/294 (45%), Gaps = 35/294 (11%)

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L M N +Q +  +N ++   VKL +   A+   +Q+  K+I P + TFN LI  FC  G 
Sbjct: 55  LHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGH 114

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           +  A  +L  I   G  P  VT TT +   C  G ++  L    ++  K      V+Y  
Sbjct: 115 LNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGT 174

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK---------------- 497
           +I GLCK  + + A+Q+L  +  + V P+ + YNTII S CK K                
Sbjct: 175 LINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKR 234

Query: 498 -------------------DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
                               L++A  L NQM L N++P   T+NIL+DGLC  G++K A 
Sbjct: 235 IFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKAR 294

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            +L  + +  +    V Y +++  +      +KA   F  M  +G    ++ Y+
Sbjct: 295 NVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYS 348



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 23/286 (8%)

Query: 356 LGNIGEAVQLYRQLIEKR--ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           + N+ +AV  +  ++  R  + P I  FN ++    K      A      ++L  ++P  
Sbjct: 41  IDNVDDAVSSFNHILHMRNPVQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDL 99

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            T+   +N +C  G++    ++L ++      P  VT T +IKGLC   K++EA+   +D
Sbjct: 100 FTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDD 159

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           +   G   DQ++Y T+I   CK  + R A Q+L ++    ++P    YN +ID LC +  
Sbjct: 160 VIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKL 219

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           + +A  L   +    I    V YTT+I      G + +A+  F QM+ K  +        
Sbjct: 220 VIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIK-------- 271

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                       PD     +++    + G++     + AVMIK G+
Sbjct: 272 ------------PDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGV 305



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 5/196 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
           +T MV +AV +  +M    +  +  TYNSL+  L    R +D  WDL +++     P +V
Sbjct: 356 KTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISD-AWDLVNEMHNRGQPADV 414

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T S ++D LC+  ++  AI  + +   +   P++ +   ++   CK G  + A+ ++  
Sbjct: 415 ITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQD 474

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +L  G H D   YN++++GLC  G  +EAL   + M  +G  PDA+TY  L +      +
Sbjct: 475 LLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDK 534

Query: 184 ISGAWKVIQKLLIKGS 199
              A K++++++++GS
Sbjct: 535 NDKAVKLLREMIVQGS 550



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 38/257 (14%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A FV   M    +   +Q+Y+ ++  L   +  D   +L+ ++       N  T + +ID
Sbjct: 328 ATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLID 387

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           GL +  R+ DA   + E   +     V++ ++++   CK    + A  L   +   G+ P
Sbjct: 388 GLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQP 447

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           + ++Y IL+ GLC  G +++A                                     V 
Sbjct: 448 NIYTYTILVDGLCKNGRLKDA-----------------------------------QAVY 472

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           Q LLIKG   D+  Y V++ G C+ G  +E L L   M   G   + + Y  L+ ++ ++
Sbjct: 473 QDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFEN 532

Query: 252 GRIDEALGLLYEMEAVG 268
            + D+A+ LL EM   G
Sbjct: 533 DKNDKAVKLLREMIVQG 549


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 231/479 (48%), Gaps = 35/479 (7%)

Query: 117  AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
            A GLFC ML+    P    +  ++  +      +  +   + M   G+  D  +++IL  
Sbjct: 599  AFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIH 658

Query: 177  GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
             F   S+ S A  ++ K++  G  P IVT   L+ G+CQ    +E + L + M   G + 
Sbjct: 659  CFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEP 718

Query: 237  NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            NV+ Y+ +++ +CK+  ++ AL + Y ME  G+  D VTY+ LI GLC   +   A +L 
Sbjct: 719  NVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLL 778

Query: 297  NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             +M  ++I PN                                   V+ +  +ID +VK 
Sbjct: 779  RDMVKRKIDPN-----------------------------------VIFFTALIDTFVKE 803

Query: 357  GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
            GN+ EA  LY+++I + + P+I+T+NSLI GFC  G++ DA+ + D +   G  P  VTY
Sbjct: 804  GNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTY 863

Query: 417  TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
             T +  +C+   ++  + L  EM  + +     TY  +I G C+  KL  A ++   M  
Sbjct: 864  NTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 923

Query: 477  IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             GV PD +TYN ++   C    + KA  ++  +  + ++    TYNI+I G+C N  +K 
Sbjct: 924  CGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKE 983

Query: 537  ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF 595
            A CL  SL    + L  +AY T+I   C  G   +A     +M E GF  S R Y ++ 
Sbjct: 984  AWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETL 1042



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 222/471 (47%), Gaps = 71/471 (15%)

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           E A  LF  M++    P    +  L+  +      E  + F+  M   G+  D  +++IL
Sbjct: 47  EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
              F   S++S A  ++ K++  G DP IVT+  L+ G+C    + +   L   M+  G+
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG-LKPDLVTYSILIRGLCKQDKVHKAI 293
           + NV+ Y+ L+  +CK+G ++ AL LL EME  G L  DLVTY+ L+ GLC   +  +A 
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           ++  +M  +RI+P                                   DV  +  +ID +
Sbjct: 227 RILRDMTKRRINP-----------------------------------DVFTFTALIDAF 251

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           VK GN+ EA +LY+Q+++  I P+ VT+NSLI G C +G++  A++  D +   G  P+ 
Sbjct: 252 VKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNV 311

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTY T +N +C+   ++  + L Q M  + +     TY  +I G C+  KL+ A  +   
Sbjct: 312 VTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSW 371

Query: 474 MYVIGVTPDQIT-----------------------------------YNTIIRSFCKCKD 498
           M   GVTPD IT                                   YN +I   CK   
Sbjct: 372 MVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADK 431

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           + +A++L  ++ +  ++P + TY I+I GLC NG  + AD L   ++E  I
Sbjct: 432 VEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 223/445 (50%)

Query: 78   RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
            +  DA     E       PS+V    +++   K+   ++   LF  M   G+  D +S+ 
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 138  ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
            ILIH  C       AL     M + G +P  +T   L  GF   ++   A  ++  +   
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 198  GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
            G +P++V Y  +I G C+  ++   L++   M  +G   + + Y+ L+S +C SGR  +A
Sbjct: 715  GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 258  LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
              LL +M    + P+++ ++ LI    K+  + +A  LY EM  + + PN   + +++ G
Sbjct: 775  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 318  LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
             C +  + +A+  FD ++   C  DVV YN +I G+ K   + + ++L+ ++  + +   
Sbjct: 835  FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894

Query: 378  IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
              T+N+LI+G+C+ GK+  A+++ + +   G+ P  VTY   ++  C  G I++ L +++
Sbjct: 895  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVE 954

Query: 438  EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            +++   +    +TY ++I+G+C+  K++EA  L   +   GV  D I Y T+I   C+  
Sbjct: 955  DLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014

Query: 498  DLRKAFQLLNQMWLHNLEPTSATYN 522
              R+A +L  +M      P+   Y+
Sbjct: 1015 LRREADKLCTRMKEDGFMPSERIYD 1039



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 164/681 (24%), Positives = 284/681 (41%), Gaps = 42/681 (6%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYT 65
           +G    A  ++  M +  +   + T+ +L+       + D   +LY  +  S    N  T
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + +I+GLC   RL  A       A K   P+VV+ N +++ +CK    E    LF  M 
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMY 338

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + GL  D F+YN LIHG C  G +  A +  + M   GV PD IT+ IL  G  +  +I 
Sbjct: 339 REGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIG 398

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A      +        IV Y ++I G C+   VEE  +L   +  +G K +   Y++++
Sbjct: 399 SAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMI 458

Query: 246 SSMCKSGRIDEALGLLYEMEAVGL-------------KPDLVTYSILIRGLCKQDKVHKA 292
             +CK+G   EA  L   M+  G+               + V+   +I    ++  + ++
Sbjct: 459 LGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMES 518

Query: 293 IQLY-----NEMCSKRISPNSFAHGAILLGLCEKEMITEAR------MYFDSLIMSNCIQ 341
             LY       + S  +     A  + + G   + ++   R        F      +   
Sbjct: 519 GDLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHH 578

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
               Y   +   +      +A  L+ ++++ R  PSIV F  ++    K  K      L 
Sbjct: 579 HHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLF 638

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             ++  G+     ++T  ++ +C        LALL +M      P+ VT   ++ G C+ 
Sbjct: 639 HKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQG 698

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            + QEAV L++ M  +G+ P+ + YNT+I   CK +DL  A ++   M    +   + TY
Sbjct: 699 NRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTY 758

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N LI GLC +G   +A  LL  + +  I    + +T +I     EG++ +A   + +M+ 
Sbjct: 759 NTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIR 818

Query: 582 KGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
           +    +I  Y                K  F +M+S G  PD      ++  F +   +  
Sbjct: 819 RSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 878

Query: 627 VFELAAVMIKSGLLPDKFLIN 647
             +L   M   GL+ D F  N
Sbjct: 879 GMKLFCEMTHQGLVGDAFTYN 899



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 213/412 (51%)

Query: 45   DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
            DI+  L+  ++      ++Y+ +I+I   C+ SR   A+  L +     F PS+V+L ++
Sbjct: 632  DIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSL 691

Query: 105  MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
            ++ +C+    + A  L   M + GL P+   YN +I+GLC    +  ALE    M + G+
Sbjct: 692  LNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGI 751

Query: 165  EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
              DA+TY+ L  G     + + A ++++ ++ +  DP+++ +T LI  + + GN+ E   
Sbjct: 752  VADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKN 811

Query: 225  LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
            L + M+ +    N++ Y+ L++  C  GR+ +A  +   M + G  PD+VTY+ LI G C
Sbjct: 812  LYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFC 871

Query: 285  KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
            K  +V   ++L+ EM  + +  ++F +  ++ G C+   +  A+  F+ ++      D+V
Sbjct: 872  KSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIV 931

Query: 345  LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
             YNI++D     G I +A+ +   L + ++   I+T+N +I G C+N KV +A  L  ++
Sbjct: 932  TYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSL 991

Query: 405  KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
               G++  A+ Y T ++  C  G  +    L   M+     P+   Y   ++
Sbjct: 992  TRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLR 1043



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 190/393 (48%), Gaps = 1/393 (0%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P +V +T L+     +   E  +   + M   G   ++ ++++L+   C+  R+  AL +
Sbjct: 63  PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L +M  +G  P +VT+  L+ G C ++++H A  L   M      PN   +  ++  LC+
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCK 182

Query: 321 KEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
              +  A    + +     +  D+V YN ++ G    G   +A ++ R + ++RI+P + 
Sbjct: 183 NGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVF 242

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           TF +LI  F K G + +A+ L   +    + P+ VTY + +N  C  G +         M
Sbjct: 243 TFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLM 302

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
            +K   P  VTY  +I G CK  ++++ ++L + MY  G+  D  TYNT+I  +C+   L
Sbjct: 303 ASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKL 362

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
           R A  + + M    + P   T+ IL+ GLCVNG++ +A      ++     L  VAY  +
Sbjct: 363 RVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIM 422

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           I   C    V +A   FC++  +G +   R YT
Sbjct: 423 IHGLCKADKVEEAWELFCRLPVEGVKPDARTYT 455



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 216/446 (48%), Gaps = 9/446 (2%)

Query: 8   RTGMVH-----DAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSET 59
           RTG +H     DA+ +  +M +     S+  +  LL    NLR  + +      +++   
Sbjct: 37  RTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGI 96

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             ++Y+ +I+I   C+ SRL  A+  L +     + PS+V+  +++  +C       A  
Sbjct: 97  SHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFS 156

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG-VEPDAITYSILAKGF 178
           L   M+K G  P+   YN LI  LC  G +  ALE  N+M + G +  D +TY+ L  G 
Sbjct: 157 LVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGL 216

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               +   A ++++ +  +  +PD+ T+T LI  + + GN++E  +L + ML      N 
Sbjct: 217 CYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNT 276

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y+ L++ +C  GR+  A      M + G  P++VTY+ LI G CK  +V   ++L+  
Sbjct: 277 VTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQR 336

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  + +  ++F +  ++ G C+   +  A+  F  ++      D++ + I++ G    G 
Sbjct: 337 MYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGE 396

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           IG A+  +  +        IV +N +I+G CK  KV +A  L   + + G++P A TYT 
Sbjct: 397 IGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTI 456

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAI 444
            +   C+ G  +    L + M+   I
Sbjct: 457 MILGLCKNGPRREADELFRRMKEDGI 482



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/423 (23%), Positives = 194/423 (45%)

Query: 69   VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
            V+  + + ++    I    +         + S   ++  +C+     +A  L   M+K G
Sbjct: 621  VLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLG 680

Query: 129  LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
              P   +   L++G C     +EA+   + M   G+EP+ + Y+ +  G      ++ A 
Sbjct: 681  FQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNAL 740

Query: 189  KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            ++   +  KG   D VTY  LI G C  G   +  +L   M+ +    NVI ++ L+ + 
Sbjct: 741  EIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 800

Query: 249  CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
             K G + EA  L  EM    + P+++TY+ LI G C Q ++  A  +++ M SK   P+ 
Sbjct: 801  VKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDV 860

Query: 309  FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
              +  ++ G C+ + + +    F  +     + D   YN +I GY + G +  A +++ +
Sbjct: 861  VTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 920

Query: 369  LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
            +++  + P IVT+N L+   C NGK+  A  +++ ++ + ++   +TY   +   C    
Sbjct: 921  MVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDK 980

Query: 429  IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
            ++    L + +  K +    + Y  +I GLC+    +EA +L   M   G  P +  Y+ 
Sbjct: 981  VKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDE 1040

Query: 489  IIR 491
             +R
Sbjct: 1041 TLR 1043



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 157/667 (23%), Positives = 272/667 (40%), Gaps = 88/667 (13%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           + ++  V D + +  +M    L     TYN+L++    +    +  D++  +       +
Sbjct: 321 FCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPD 380

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T+ I++ GLC    +  A++   +    E    +V+ N ++   CK    E A  LFC
Sbjct: 381 IITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFC 440

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   G+ PDA +Y I+I GLC  G   EA E    M   G+   A    +   G +  +
Sbjct: 441 RLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTN--N 498

Query: 183 QISGAWKVI----QKLLIKGSD-----PDIVTYTVLICGYCQIGNVE--EGLKLREVML- 230
           Q+S    +I    ++ +++  D      D   ++ L+ G   I +    +G   R ++L 
Sbjct: 499 QVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLV-GLIPIASSSSVKGFVRRHLLLL 557

Query: 231 -------SQGFK--------LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
                  S+ F          +   Y   L S     + D+A GL  EM      P +V 
Sbjct: 558 ERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVD 617

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ ++  + K +K    I L+++M +  IS                              
Sbjct: 618 FTRVLTAIAKMNKFDIVIYLFHKMENLGIS------------------------------ 647

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D+  + I+I  + +      A+ L  ++++    PSIVT  SL+ GFC+  +  
Sbjct: 648 -----HDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQ 702

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  L+D++   GLEP+ V Y T +N  C+  ++   L +   ME K I    VTY  +I
Sbjct: 703 EAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLI 762

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLC   +  +A +LL DM    + P+ I +  +I +F K  +L +A  L  +M   ++ 
Sbjct: 763 SGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVH 822

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TYN LI+G C+ G L +A  +   +         V Y T+I   C    V   M  
Sbjct: 823 PNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 882

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
           FC+M                       G   D      ++  + Q G L    ++   M+
Sbjct: 883 FCEMTH--------------------QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 922

Query: 636 KSGLLPD 642
             G+ PD
Sbjct: 923 DCGVPPD 929



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/480 (23%), Positives = 193/480 (40%), Gaps = 86/480 (17%)

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           G+      E+ L L   M+      +V+ ++ LL+++    R +  +    +ME  G+  
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           DL +++ILI   C+  ++  A+ +  +M      P+    G++L G C +  I +A    
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
            S++ S              GY                      P++V +N+LI   CKN
Sbjct: 159 ASMVKS--------------GY---------------------EPNVVVYNTLIDCLCKN 183

Query: 392 GKVADARRLLDTIKLHG------------------------------------LEPSAVT 415
           G V  A  LL+ ++  G                                    + P   T
Sbjct: 184 GDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFT 243

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           +T  ++A+ ++GN+     L ++M   +IGP  VTY  +I GLC   +L  A +  + M 
Sbjct: 244 FTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMA 303

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G  P+ +TYNT+I  FCK + +    +L  +M+   L   + TYN LI G C  G L+
Sbjct: 304 SKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLR 363

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV--EK-----GFEISI 588
            A  +   +    ++   + +  ++   C  G++  AM  F  M   EK      + I I
Sbjct: 364 VAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMI 423

Query: 589 RDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
               K+         FC +   G  PD     +M++   + G      EL   M + G++
Sbjct: 424 HGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGII 483


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 264/529 (49%), Gaps = 2/529 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V   + VIDG  ++  +  A    +E   +   P +V+ ++++   CK    + A+   
Sbjct: 220 DVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFL 279

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G+ PD ++YN LI+G    G  +EA+    +M R  + PD +  + L       
Sbjct: 280 RQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKY 339

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  V   + +KG +PD+ +YT+++ GY   G + +   L ++ML  G   ++  +
Sbjct: 340 GKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTF 399

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+ +    G +D+A+ +  EM   G+KP +VTY  +I  LC+  K+  A++ +N+M  
Sbjct: 400 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMID 459

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIG 360
           + + P+ +A+  ++ G C    + +A+    S IM+N ++ D+V +  +I+   KLG + 
Sbjct: 460 QGVVPDKYAYHCLIQGFCTHGSLLKAKELI-SEIMNNGMRLDIVFFGSIINNLCKLGRVM 518

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  ++   +   + P  V +N L+ G+C  GK+  A R+ D +   G+EP+ V Y T +
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YC+ G I   L+L +EM  K I P+ + Y ++I GL +  +   A     +M   G+ 
Sbjct: 579 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 638

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            ++ TY+ ++R   K +   +A  L  ++   N++    T N +I G+     ++ A  L
Sbjct: 639 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 698

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             S+    +    V Y+ +I     EG V +A   F  M   G E   R
Sbjct: 699 FASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSR 747



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 155/602 (25%), Positives = 275/602 (45%), Gaps = 27/602 (4%)

Query: 53  DIKVSETPR-----NVYTNSIVIDGLCQQSR--LQDAILFLQETAGKEFGPSVVSLNAIM 105
           DI +  TP      +V++ +I++  LC Q +    D +L +    G    P VV+ N ++
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 106 SRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE 165
             + K G    A  LF  M++ G+ PD  +Y+ ++H LC A +M++A  F   M   GV 
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           PD  TY+ L  G+    Q   A +V +++  +   PD+V    L+   C+ G ++E   +
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
            + M  +G   +V +Y+++L+     G + +   L   M   G+ PD+ T+++LI+    
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 408

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
              + KA+ ++NEM    + P+   +  ++  LC    + +A   F+ +I    + D   
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y+ +I G+   G++ +A +L  +++   +   IV F S+I   CK G+V DA+ + D   
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTV 528

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             GL P AV Y   M+ YC  G +++ L +   M +  I P  V Y  ++ G CK  ++ 
Sbjct: 529 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 588

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           E + L  +M   G+ P  I YN II    +      A    ++M    +     TY+I++
Sbjct: 589 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            GL  N     A  L   L+  N+ +  +   T+I           A  F  + VE+   
Sbjct: 649 RGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMI-----------AGMFQTRRVEEA-- 695

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                  K  F  +  +G  P      +M+    + G +    ++ + M  +G  PD  L
Sbjct: 696 -------KDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRL 748

Query: 646 IN 647
           +N
Sbjct: 749 LN 750



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 259/519 (49%), Gaps = 18/519 (3%)

Query: 82  AILFLQETAGKEFGPSVVSLN----AIMSRYC-KLGFAEVAKGLFCLMLKYGLHPDAFSY 136
           A+      A +  GP V+S      AI+   C +    E+A   F  +L+ GL  DA   
Sbjct: 92  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 151

Query: 137 NILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQ-ISGAWKVIQKL 194
           + L+ G C A   +EAL+   +     G  PD  +Y+IL K   L +Q  SG    + ++
Sbjct: 152 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKS--LCNQGKSGQADDLLRM 209

Query: 195 LIKGS---DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           + +G     PD+V Y  +I G+ + G+V +   L + M+ +G   +++ YS ++ ++CK+
Sbjct: 210 MAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKA 269

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
             +D+A   L +M   G+ PD  TY+ LI G     +  +A++++ EM  + I P+  A 
Sbjct: 270 RAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVAL 329

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++  LC+   I EAR  FD++ M     DV  Y IM++GY   G + +   L+  ++ 
Sbjct: 330 NTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLG 389

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
             I+P I TFN LI  +   G +  A  + + ++ HG++P  VTY T + A C  G +  
Sbjct: 390 DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDD 449

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            +    +M  + + P    Y  +I+G C    L +A +L+ ++   G+  D + + +II 
Sbjct: 450 AMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 509

Query: 492 SFCK---CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           + CK     D +  F L   + LH   P +  YN+L+DG C+ G ++ A  +  ++    
Sbjct: 510 NLCKLGRVMDAQNIFDLTVNVGLH---PDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           I    V Y T++  +C  G + + ++ F +M++KG + S
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 605



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 138/585 (23%), Positives = 272/585 (46%), Gaps = 40/585 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPR 61
           + + G V+ A  +  +M +  +   + TY+S+++ L     M      L   +     P 
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N +T + +I G     + ++A+   +E   +   P VV+LN +M   CK G  + A+ +F
Sbjct: 291 N-WTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G +PD FSY I+++G    G + +  +  + M   G+ PD  T+++L K +   
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 409

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A  +  ++   G  P +VTY  +I   C+IG +++ ++    M+ QG   +  AY
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
             L+   C  G + +A  L+ E+   G++ D+V +  +I  LCK  +V  A  +++   +
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             + P++  +  ++ G C    + +A   FD+++ +    +VV Y  +++GY K+G I E
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            + L+R++++K I PS + +N +I G  + G+   A+     +K H              
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK-----VKFH-------------- 630

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
                           EM    I     TY++V++GL K     EA+ L +++  + V  
Sbjct: 631 ----------------EMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKI 674

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D IT NT+I    + + + +A  L   +    L P + TY+I+I  L   G ++ A+ + 
Sbjct: 675 DIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMF 734

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
            S+Q             +++    + ++ +A  +  ++ E+ F +
Sbjct: 735 SSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSL 779



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 229/469 (48%), Gaps = 3/469 (0%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSE 58
           L + YS TG   +AV V  +M+   +   +   N+L+ +L ++  I    D++D + +  
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +V++ +I+++G   +  L D         G    P + + N ++  Y   G  + A 
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAM 416

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M  +G+ P   +Y  +I  LC  G M++A+E  N M   GV PD   Y  L +GF
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +  A ++I +++  G   DIV +  +I   C++G V +   + ++ ++ G   + 
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 536

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y++L+   C  G++++AL +   M + G++P++V Y  L+ G CK  ++ + + L+ E
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 596

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  K I P++  +  I+ GL E      A++ F  +  S    +   Y+I++ G  K   
Sbjct: 597 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 656

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             EA+ L+++L    +   I+T N++I G  +  +V +A+ L  +I   GL P AVTY+ 
Sbjct: 657 FDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSI 716

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
            +    +EG ++    +   M+     P       V++ L K+ ++  A
Sbjct: 717 MITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 100/242 (41%), Gaps = 31/242 (12%)

Query: 433 LALLQEMETKAIGP-----THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           +AL     ++A GP     T  TY +++    +  + + A+     +   G+  D I  +
Sbjct: 93  VALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIAS 152

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLE-----PTSATYNILIDGLCVNGDLKNADCLLV 542
            +++ FC+ K   +A  +L    LH        P   +YNIL+  LC  G    AD LL 
Sbjct: 153 HLLKGFCEAKRTDEALDIL----LHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLR 208

Query: 543 SLQEHNI--SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
            + E     S   VAY T+I     EGDV+KA   F +MV++G    +  Y+        
Sbjct: 209 MMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCK 268

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                  ++F   M++ G  PD      ++  +   G       +   M +  +LPD   
Sbjct: 269 ARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVA 328

Query: 646 IN 647
           +N
Sbjct: 329 LN 330


>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 155/503 (30%), Positives = 247/503 (49%), Gaps = 12/503 (2%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+ ++ A++    + G    A  +F  M   G  P    +N +I G C  G +   L  
Sbjct: 173 PSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIGLGL 232

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M R  V PDA +Y+IL KG+ +  Q   A++++ ++   G  P +VTY +L+   C 
Sbjct: 233 LGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCH 292

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            GN+ +  +L + M+  G + N I ++VL+    K+GR+DEA     EM+A GL PD  T
Sbjct: 293 DGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCT 352

Query: 276 YSILIRGLCKQDKVHKAIQL------YNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           ++IL  G     K  KA+QL       +EM   RIS +S     ++  LC    + +A  
Sbjct: 353 FNILSAG---AYKFGKAVQLAHGQQELHEMFGSRISADSV--DMVVCRLCWDGRLDDAWK 407

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
              S I       V  +N ++  Y K G   +A+++Y  + +  + PS  TFN LI G C
Sbjct: 408 LVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLC 467

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
             G++ DA+ LL+ +   G      ++T +M++Y   GN++  L    +M    + P  +
Sbjct: 468 NQGRLDDAQLLLEHMICKGY-CVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFI 526

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            ++  I GLC+   + EA Q   +M   G  P+ ITYN++I +FC+   + +A +L  +M
Sbjct: 527 AFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKM 586

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               L P   T NILIDG C  G L   +   + +    ++   V Y TII A+C   D+
Sbjct: 587 RQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDM 646

Query: 570 HKAMTFFCQMVEKGFEISIRDYT 592
             AM F  +M+  G E  I  Y 
Sbjct: 647 SSAMIFMNKMLADGCEPDIFTYN 669



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 131/539 (24%), Positives = 255/539 (47%), Gaps = 41/539 (7%)

Query: 84  LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGL 143
           +F++ TA +   PS+   NA++  +C  G   +  GL  +M ++ + PDA SYNILI G 
Sbjct: 197 VFVEMTA-RGPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGY 255

Query: 144 CIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
            + G   +A +  ++M   G +P  +TY+IL         +  A ++  +++  G + + 
Sbjct: 256 SVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANT 315

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL------------------- 244
           +T+ VL+ GY + G ++E       M ++G   +   +++L                   
Sbjct: 316 ITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQE 375

Query: 245 -----------------LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
                            +  +C  GR+D+A  L+      G+   +  ++ L+    K+ 
Sbjct: 376 LHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEG 435

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN-CIQDVVLY 346
              +A+++Y+ M    + P+S     +++GLC +  + +A++  + +I    C+     +
Sbjct: 436 FDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVG--TSF 493

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
            I +D Y + GN+  A++ +  +++  + P  + F++ I G C+   V +A +    +  
Sbjct: 494 TIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTG 553

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G  P+ +TY + ++A+C  G +   L L ++M    + P   T  ++I G CK+ +L  
Sbjct: 554 RGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDM 613

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
             +   DMY  G+TPD +TYNTII ++C  +D+  A   +N+M     EP   TYNI + 
Sbjct: 614 MNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMH 673

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            LC N  L  A  +L  L         V Y T++   C++  + +AM    ++++  F+
Sbjct: 674 SLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICSDV-LDRAMILTGKLIKMAFQ 731



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/526 (25%), Positives = 246/526 (46%), Gaps = 12/526 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           YS  G   DA  ++ +M+E   + ++ TYN L+  L H   M D   L+D++       N
Sbjct: 255 YSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEAN 314

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA-EVAKGLF 121
             T ++++DG  +  R+ +A    +E   +   P   + N + +   K G A ++A G  
Sbjct: 315 TITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQ 374

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH-- 179
            L   +G    A S ++++  LC  G +++A +        GV      ++ L   +   
Sbjct: 375 ELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKE 434

Query: 180 -LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               Q    + V+ K+ +  S P   T+  LI G C  G +++   L E M+ +G+ +  
Sbjct: 435 GFDEQALEVYSVMNKIGLVPSSP---TFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVGT 491

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
            ++++ + S  +SG ++ AL    +M  VG++PD + +S  I GLC+ D V++A Q + E
Sbjct: 492 -SFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVE 550

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  +   PN+  + +++   C    ++EA      +  S  I DV   NI+IDG+ K G 
Sbjct: 551 MTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGR 610

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +    + +  +    ++P +VT+N++I  +C    ++ A   ++ +   G EP   TY  
Sbjct: 611 LDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNI 670

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
           +M++ C    + R + +L E+      P  VTY  ++ G+C    L  A+ L   +  + 
Sbjct: 671 WMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICSD-VLDRAMILTGKLIKMA 729

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
             P+ +T N     FCK    ++A     ++   ++    AT NIL
Sbjct: 730 FQPNTVTVNVFFSHFCKQGFGKRALVWAEKLKEDSVAFDDATMNIL 775



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 202/465 (43%), Gaps = 64/465 (13%)

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           A  + L +   +G   EAL +L  +   G  P L   + L+R L +  +V  A +++ EM
Sbjct: 142 ALRLALHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEM 201

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            ++   P+     A++LG C + ++         +   N I D   YNI+I GY   G  
Sbjct: 202 TARGPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQA 261

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           G+A QL  ++ E    P++VT+N L+   C +G + DARRL D +   G+E + +T+   
Sbjct: 262 GDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVL 321

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL------LED 473
           ++ Y + G +    A  +EM+ + + P   T+ ++  G    +K  +AVQL      L +
Sbjct: 322 VDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAG---AYKFGKAVQLAHGQQELHE 378

Query: 474 MYVIGVTPDQIT---------------------------------YNTIIRSFCKCKDLR 500
           M+   ++ D +                                  +N ++ ++ K     
Sbjct: 379 MFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDE 438

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS---LTKVAYT 557
           +A ++ + M    L P+S T+N LI GLC  G L +A  LL    EH I        ++T
Sbjct: 439 QALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLL----EHMICKGYCVGTSFT 494

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFE---ISIRDYTKSF------------FCMMLSN 602
             + ++   G+V  A+  +  MV+ G +   I+   Y                F  M   
Sbjct: 495 IYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGR 554

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           GF P+      ++ AF + G +    +L   M +SGL+PD F  N
Sbjct: 555 GFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSN 599



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 173/387 (44%), Gaps = 34/387 (8%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
           L   YS+ G    A+ V + M ++ L  S  T+N L                        
Sbjct: 427 LVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYL------------------------ 462

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
                   I GLC Q RL DA L L+    K +     S    M  Y + G  E A   +
Sbjct: 463 --------IMGLCNQGRLDDAQLLLEHMICKGYCVG-TSFTIYMDSYFRSGNVEGALKCW 513

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+K G+ PD  +++  I GLC    + EA +   +M   G  P+ ITY+ L   F  +
Sbjct: 514 DDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRV 573

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +S A K+ +K+   G  PD+ T  +LI G+C+ G ++   K    M + G   +V+ Y
Sbjct: 574 GYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTY 633

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++++ C +  +  A+  + +M A G +PD+ TY+I +  LC    +++A+++ +E+ +
Sbjct: 634 NTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVA 693

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               PNS  +  ++ G+C  +++  A +    LI      + V  N+    + K G    
Sbjct: 694 MGCMPNSVTYNTLMDGICS-DVLDRAMILTGKLIKMAFQPNTVTVNVFFSHFCKQGFGKR 752

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGF 388
           A+    +L E  ++    T N L + +
Sbjct: 753 ALVWAEKLKEDSVAFDDATMNILDWAY 779


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 153/496 (30%), Positives = 238/496 (47%), Gaps = 22/496 (4%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           K +  SV + N  +    K    ++A   F  M + G  PD F+Y+I++ GLC AG +++
Sbjct: 32  KGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDK 91

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTYTVLI 210
           A E    +   GV+ + ITYS++  G    S++  A ++ + +   G   PD+VT+  L+
Sbjct: 92  AKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLL 151

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C    + E   L E M   G + NVI+YS LL  +CK+GR+DEA  L  EM      
Sbjct: 152 KGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCV 211

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PDLV Y+  + GLCK ++V +A     +M +K    ++ A   ++  LC+K    EA+  
Sbjct: 212 PDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ-- 269

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
                           N MI+   + G + EA + + ++I +   PS   FN+LI+  CK
Sbjct: 270 ----------------NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCK 313

Query: 391 NGKVADARRL---LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           + ++ D   L   + ++K     P+  TY   ++  C+   +     L+ EM    + P 
Sbjct: 314 SKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPD 373

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            VTY+ ++ GLCK  KL  A  LLE+M   GV PD  T  +I+ +  K   +  A   L 
Sbjct: 374 VVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLE 433

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M      P   TYN L+DGLC  G +  A   L  +     +    +YT II A C  G
Sbjct: 434 TMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSG 493

Query: 568 DVHKAMTFFCQMVEKG 583
               A   F +MV++G
Sbjct: 494 QAAGAHAIFQEMVKRG 509



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 239/519 (46%), Gaps = 59/519 (11%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNA 103
           D   +L   ++ S    NV T S+VIDG C+ SR+ DA+ +F   ++G    P VV+ N+
Sbjct: 90  DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNS 149

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           ++   C       A  LF  M K G  P+  SY+ L+ GLC AG ++EA     +M    
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
             PD + Y+    G    ++++ A    +K++ KGS  D V ++ +I   C+ G+ EE  
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269

Query: 224 K------LREVMLSQGFKL----------------------------------------- 236
                   R  ML +  K                                          
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329

Query: 237 --------NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
                   N+  Y++++ ++CK+ ++DEA  L+ EM   GL PD+VTYS L+ GLCK  K
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + +A  L  EM  + + P+SF   +IL  L +   +  A  + +++       D+V YN 
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           ++DG  K G I EA+    +++  + +P + ++  +I   C++G+ A A  +   +   G
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P  V Y + ++     G     L LL+   T    P  V + +V+ GLCK  K ++A 
Sbjct: 510 VLPDTVLYHSLLDGLARNGLEDLALELLK---TSLCKPDFVMHKMVLDGLCKAGKAEDAC 566

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
           +++E M   G   D  TY +++    K   + KA QL++
Sbjct: 567 EVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVD 605



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 240/509 (47%), Gaps = 42/509 (8%)

Query: 159 MGRH-GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           +GR  G +    TY+         +    A++  Q++  +G  PD  TY++++ G C+ G
Sbjct: 28  LGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAG 87

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG-LKPDLVTY 276
            +++  +L   +   G KLNVI YSV++   CK+ R+D+AL +   M + G   PD+VT+
Sbjct: 88  ELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTF 147

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + L++GLC  +++ +A  L+  M      PN  ++  +L GLC+   + EA   ++ ++ 
Sbjct: 148 NSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVE 207

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
            +C+ D+V Y   + G  K   + EA    R+++ K      V F+++I   CK G   +
Sbjct: 208 KSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEE 267

Query: 397 AR-RLLDTIKLHGL----------------EPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           A+ ++++ +   G+                 PSA  + T ++A C+   +   + L Q M
Sbjct: 268 AQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRM 327

Query: 440 ETKA---IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           ++       P   TY +++  LCK  +L EA +L+ +M   G++PD +TY+ ++   CK 
Sbjct: 328 KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKL 387

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
             L +A  LL +M    + P S T   +++ L   G +  A   L +++    +   V Y
Sbjct: 388 GKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTY 447

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
            T++   C  G + +A+TF  +MV       +  YT                    +++ 
Sbjct: 448 NTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYT--------------------IIIT 487

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           A  + G       +   M+K G+LPD  L
Sbjct: 488 ALCRSGQAAGAHAIFQEMVKRGVLPDTVL 516



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 207/466 (44%), Gaps = 61/466 (13%)

Query: 31  IQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           + T+NSLL  L   + M +   L++ +  +    NV + S ++DGLC+  RL +A    +
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203

Query: 88  ETAGKEFGPSVVS-----------------------------------LNAIMSRYCKLG 112
           E   K   P +V+                                    + ++   CK G
Sbjct: 204 EMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKG 263

Query: 113 FAEVAKG-----------------LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL-- 153
            AE A+                   F  M+     P A  +N LIH +C +  + + +  
Sbjct: 264 HAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323

Query: 154 -EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
            +    M      P+  TY+I+        Q+  A +++ ++   G  PD+VTY+ L+ G
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDG 383

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            C++G ++    L E M  +G   +    + +L+++ K+G++D AL  L  M+A G  PD
Sbjct: 384 LCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPD 443

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           LVTY+ L+ GLCK  ++ +AI    +M + + +P+ F++  I+  LC       A   F 
Sbjct: 444 LVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQ 503

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            ++    + D VLY+ ++DG  + G    A++L +  + K   P  V    ++ G CK G
Sbjct: 504 EMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK---PDFVMHKMVLDGLCKAG 560

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           K  DA  +++ +   G    A TY + ++   + G + +   L+ +
Sbjct: 561 KAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDD 606



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 153/319 (47%), Gaps = 6/319 (1%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAG-KEF--GPSVVSLNAIMSRYCKLGFAEV 116
           P +    + +I  +C+  RL D +L  Q     KEF   P++ + N ++   CK    + 
Sbjct: 298 PPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDE 357

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A+ L   M  YGL PD  +Y+ L+ GLC  G ++ A +   +M + GV PD+ T + +  
Sbjct: 358 AQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILN 417

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
                 ++  A   ++ +  +GS PD+VTY  L+ G C+ G ++E +     M++     
Sbjct: 418 ALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTP 477

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +V +Y+++++++C+SG+   A  +  EM   G+ PD V Y  L+ GL +      A++L 
Sbjct: 478 DVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL 537

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
                K   P+   H  +L GLC+     +A    + +  +    D   Y  ++ G  KL
Sbjct: 538 KTSLCK---PDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKL 594

Query: 357 GNIGEAVQLYRQLIEKRIS 375
           G + +A QL     E   S
Sbjct: 595 GKVDKARQLVDDASETHTS 613



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 155/332 (46%), Gaps = 44/332 (13%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSET---PR 61
           R+GM+ +A     +M   +   S + +N+L++ +  +  + D   L+  +K  +    P 
Sbjct: 278 RSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPP 337

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+ T +I++D LC+  +L +A   + E A     P VV+ +A++   CKLG  + A  L 
Sbjct: 338 NLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397

Query: 122 CLMLKYGLHPDAFS-----------------------------------YNILIHGLCIA 146
             M K G+ PD+F+                                   YN L+ GLC A
Sbjct: 398 EEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKA 457

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G ++EA+ F   M      PD  +Y+I+        Q +GA  + Q+++ +G  PD V Y
Sbjct: 458 GRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLY 517

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             L+ G  + G  +  L+L +  L    K + + + ++L  +CK+G+ ++A  ++  M  
Sbjct: 518 HSLLDGLARNGLEDLALELLKTSLC---KPDFVMHKMVLDGLCKAGKAEDACEVVERMAD 574

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
            G   D  TY  ++ GL K  KV KA QL ++
Sbjct: 575 AGFPADAFTYISVVSGLRKLGKVDKARQLVDD 606


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 250/496 (50%), Gaps = 12/496 (2%)

Query: 93  EFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
           EFG  P+V   N ++         ++   L+  M K GL P+ F+YNIL+  LC    ++
Sbjct: 137 EFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVD 196

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            A +   +M   G  PDA+TY+ +        +I  A ++  +       P +  Y  LI
Sbjct: 197 AAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----KPSVPVYNALI 251

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C+ G +E  +KL   M+  G   NV++YS +++S+C SG ++ A  L  +M   G  
Sbjct: 252 DGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCD 311

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
            ++ T++ LI+G   + K+++A+ L+  M      PN  A+  ++ GLC    + EA   
Sbjct: 312 ANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV 371

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            D +  S C+ +V  Y+I+IDG+ K G++  A + + ++I     P++VT+  ++   CK
Sbjct: 372 CDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCK 431

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           N     A  L++ + L G  P+ +T+ TF+   C  G ++  + LL+ M+     P   T
Sbjct: 432 NSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITT 491

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  ++  L +  K +EA  L +++    + P+ +TYNT++  F +   + +A QL  +  
Sbjct: 492 YNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKAL 551

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCL---LVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +    P S TYN +I   C  G +K A  L   + S++E +  +  + YT++I   C   
Sbjct: 552 VRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDI--ITYTSLIWGACNWM 609

Query: 568 DVHKAMTFFCQMVEKG 583
           ++ +AM F  + + +G
Sbjct: 610 NIEEAMAFLDKAINQG 625



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 256/524 (48%), Gaps = 9/524 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPRN 62
           Y R G    A+ +  ++ E   K +++ YN LL  L   +   ++  LY ++K      N
Sbjct: 119 YKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPN 178

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+T +I++  LC+  R+  A     E + K   P  V+   ++S  CK G  + A+    
Sbjct: 179 VFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARE--- 235

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             L     P    YN LI G+C  G +E A++   +M  +GV+P+ ++YS +     +  
Sbjct: 236 --LAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSG 293

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A+ +  ++ ++G D +I T+T LI G    G + E L L ++M+  G + NV+AY+
Sbjct: 294 NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYN 353

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +C +G ++EAL +  +M+  G  P++ TYSILI G  K   +  A + +N M S 
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH 413

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              PN   +  ++  LC+  M  +A    + + +  C  + + +N  I G    G +  A
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWA 473

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++L  ++      P+I T+N L+    +  K  +A  L   I+   L+P+ VTY T +  
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG 533

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-VTP 481
           +   G +   L L  +   +   P  +TY  +I   CKQ K++ A QL+E +  +    P
Sbjct: 534 FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHP 593

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           D ITY ++I   C   ++ +A   L++     + P  AT+N L+
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 220/495 (44%), Gaps = 20/495 (4%)

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
           A TY ++ +      ++     ++Q++ + G +     +  +I GY ++G+ E+ LK+  
Sbjct: 74  ASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFY 133

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            +   G K  V  Y+ LL ++    +      L   M+  GL P++ TY+IL++ LCK D
Sbjct: 134 RIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKND 193

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +V  A +L+ EM +K   P++  +  ++  LC+   I +AR        S     V +YN
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPS-----VPVYN 248

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +IDG  K G I  A++L  ++++  + P++V+++ +I   C +G V  A  L   + L 
Sbjct: 249 ALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G + +  T+T  +      G +   L L + M      P  V Y  +I GLC    L+EA
Sbjct: 309 GCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           +Q+ + M   G  P+  TY+ +I  F K  DL  A +  N+M  H   P   TY  ++D 
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC N     A+ L+  +     +   + + T IK  C  G V  AM    +M   G   +
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488

Query: 588 IRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
           I  Y +                 F  + +    P+      +L  F + G +G   +L  
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFG 548

Query: 633 VMIKSGLLPDKFLIN 647
             +  G  PD    N
Sbjct: 549 KALVRGTAPDSITYN 563



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 162/399 (40%), Gaps = 107/399 (26%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC------ 122
           +IDG+C++ R++ AI  L E       P+VVS + I++  C  G  E+A  LF       
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309

Query: 123 -----------------------------LMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
                                        LM++ G  P+  +YN LIHGLC  GS+EEAL
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL---- 209
           +  + M R G  P+  TYSIL  GF     + GA +   +++  G  P++VTYT +    
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429

Query: 210 -------------------------------ICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                                          I G C  G VE  +KL E M   G   N+
Sbjct: 430 CKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNI 489

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY---------------------- 276
             Y+ LL ++ +  + +EA GL  E+EA  L+P+LVTY                      
Sbjct: 490 TTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGK 549

Query: 277 -------------SILIRGLCKQDKVHKAIQLYNEMCS-KRISPNSFAHGAILLGLCEKE 322
                        + +I   CKQ KV  A QL   + S K   P+   + +++ G C   
Sbjct: 550 ALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWM 609

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYV-KLGNIG 360
            I EA  + D  I      +   +N ++  +   LG++G
Sbjct: 610 NIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMG 648


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 157/585 (26%), Positives = 287/585 (49%), Gaps = 45/585 (7%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILF---LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           +V++ +I++ GLC ++R Q+A+     + +  G    P VVS   +++ + K G +  A 
Sbjct: 157 DVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAY 216

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             +  ML   + PD  +Y+ +I  LC   +M++A+E    M ++GV P+  TY+ +  G+
Sbjct: 217 STYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGY 276

Query: 179 HLLSQISGAWKVIQKLLIKGS-----DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
               Q   A   ++K+   G      +PDI TY  L+ GY   G +     L ++M+  G
Sbjct: 277 CSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNG 336

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              +   Y++L+ +  K G++DEA+ +  +M   GL PD VTY  +I  LCK  +V  A+
Sbjct: 337 IHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAM 396

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
             + +M  + +SP +  + +++ GLC       A      ++      + + +N +ID +
Sbjct: 397 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 456

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K G + E+ +L+  ++   + P I+T+++LI G+C  GK+ +A +LL  +   GL+P+ 
Sbjct: 457 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNT 516

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTY T +N YC+   +   L L +EME+  + P  +TY ++++GL +  +   A +L   
Sbjct: 517 VTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 576

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID------- 526
           +   G   +  TYN I+   CK K    A ++   + L +L+  + T+NI+ID       
Sbjct: 577 ITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGR 636

Query: 527 --------------GLCVN--------------GDLKNADCLLVSLQEHNISLTKVAYTT 558
                         GL  N              G L+  D L +S++++  ++       
Sbjct: 637 NGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 696

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           I++     G++ +A T+   + EK F  S+   T S F  +LS G
Sbjct: 697 IVRELLQRGEITRAGTYLSMIDEKHF--SLEASTASLFIDLLSGG 739



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 149/570 (26%), Positives = 267/570 (46%), Gaps = 45/570 (7%)

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           TP  V+T +I+I   C+  RL      L     K F    ++   ++   C       A 
Sbjct: 84  TP-TVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 119 GLFCL-MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM--GRHG-VEPDAITYSIL 174
            +    M +    PD FS  IL+ GLC     +EALE  + M  GR G   PD ++Y+ +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTV 202

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             GF        A+    ++L +   PD+VTY+ +I   C+   +++ +++   M+  G 
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV 262

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEM-----EAVGLKPDLVTYSILIRG------- 282
             N   Y+ ++   C SG+  EA+G L ++     E  GL+PD+ TY  L++G       
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGAL 322

Query: 283 -------------------------LC---KQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
                                    +C   KQ KV +A+ ++++M  + ++P++  +GA+
Sbjct: 323 VGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAV 382

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           +  LC+   + +A +YF+ +I        ++YN +I G         A +L  +++++ I
Sbjct: 383 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 442

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
             + + FNS+I   CK G+V ++ +L D +   G++P  +TY+T ++ YC  G +   + 
Sbjct: 443 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMK 502

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           LL  M +  + P  VTY  +I G CK  ++ +A+ L ++M   GV+PD ITYN I++   
Sbjct: 503 LLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLF 562

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           + +    A +L  ++     +   +TYNI++ GLC N    +A  +  +L   ++ L   
Sbjct: 563 QTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEAR 622

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            +  +I A    G   +A   F      G 
Sbjct: 623 TFNIMIDALLKVGRNGEAKDLFVAFSSNGL 652



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 245/514 (47%), Gaps = 14/514 (2%)

Query: 25  LDLKVS--IQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRL 79
           LD ++S  + TY+S++  L   +  D   ++   +  +    N  T + ++ G C   + 
Sbjct: 223 LDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQP 282

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG-------LFCLMLKYGLHPD 132
           ++AI FL++       P    L   ++ YC L      KG       L  LM++ G+HPD
Sbjct: 283 KEAIGFLKKVRSDGVEPD--GLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPD 340

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
            + YNILI      G ++EA+   + M + G+ PDA+TY  +        ++  A    +
Sbjct: 341 HYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFE 400

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           +++ +G  P  + Y  LI G C     E   +L   ML +G  LN I ++ ++ S CK G
Sbjct: 401 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 460

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           R+ E+  L   M  +G+KPD++TYS LI G C   K+ +A++L + M S  + PN+  + 
Sbjct: 461 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYR 520

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++ G C+   + +A + F  +  S    D++ YNI++ G  +      A +LY ++ E 
Sbjct: 521 TLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 580

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
                + T+N +++G CKN    DA R+   + L  L+  A T+   ++A  + G     
Sbjct: 581 GTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEA 640

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             L     +  + P + TY ++ + +  Q  L+E  QL   M   G T D    N I+R 
Sbjct: 641 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRE 700

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
             +  ++ +A   L+ +   +    ++T ++ ID
Sbjct: 701 LLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 734



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 239/534 (44%), Gaps = 31/534 (5%)

Query: 80  QDAILFLQETAGKEFGPSVVSLN------------AIMSRYCKLGFAEVAKGLFCLMLKY 127
           +DA     E   +  G S+  LN            A +SRY ++  A   K         
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGK--------- 82

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            + P   +Y ILI   C A  ++       ++ + G   +AIT++ L KG     + S A
Sbjct: 83  -VTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 188 WKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVML---SQGFKLNVIAYSV 243
             ++ + + + S  PD+ + T+L+ G C     +E L+L  +M      G   +V++Y+ 
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTT 201

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +++   K G   +A    +EM    + PD+VTYS +I  LCK   + KA+++   M    
Sbjct: 202 VINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNG 261

Query: 304 ISPNSFAHGAILLGLCEKEMITEA-----RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           + PN   + +I+ G C      EA     ++  D +       D+  Y  ++ GY   G 
Sbjct: 262 VMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGA 321

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +     L   ++   I P    +N LI  + K GKV +A  +   ++  GL P AVTY  
Sbjct: 322 LVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGA 381

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +   C+ G ++  +   ++M  + + P ++ Y  +I GLC   K + A +L+ +M   G
Sbjct: 382 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 441

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           +  + I +N+II S CK   + ++ +L + M    ++P   TY+ LIDG C+ G +  A 
Sbjct: 442 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAM 501

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            LL  +    +    V Y T+I  +C    +  A+  F +M   G    I  Y 
Sbjct: 502 KLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYN 555



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 130/514 (25%), Positives = 236/514 (45%), Gaps = 41/514 (7%)

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           D+ RH        Y+ +A+        +GA KV          P + TY +LI   C+  
Sbjct: 59  DVARHSPAAAVSRYNRMAR--------AGAGKVT---------PTVHTYAILIGCCCRAD 101

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL-LYEMEAVGLKPDLVTY 276
            ++ G      ++ +GF++  I ++ LL  +C   R  +A+ + L  M  +   PD+ + 
Sbjct: 102 RLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSC 161

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKR---ISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           +IL++GLC +++  +A++L + M   R    +P+  ++  ++ G  ++    +A   +  
Sbjct: 162 TILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHE 221

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++      DVV Y+ +I    K   + +A+++   +++  + P+  T+ S+++G+C +G+
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQ 281

Query: 394 VADARRLL-----DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
             +A   L     D ++  GLEP   TY T +  Y  +G +  + ALL  M    I P H
Sbjct: 282 PKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDH 341

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
             Y ++I    KQ K+ EA+ +   M   G+ PD +TY  +I   CK   +  A     Q
Sbjct: 342 YVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQ 401

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    L P +  YN LI GLC     + A+ L++ + +  I L  + + +II +HC EG 
Sbjct: 402 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 461

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEV 613
           V ++   F  MV  G +  I  Y+     +C+             M+S G  P+      
Sbjct: 462 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRT 521

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           ++  + +   +G    L   M  SG+ PD    N
Sbjct: 522 LINGYCKISRMGDALVLFKEMESSGVSPDIITYN 555



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 195/405 (48%), Gaps = 6/405 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y++ G V +A+ V +KM++  L     TY +++  L    R  D M      I  
Sbjct: 346 ILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 405

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
             +P N+  NS+ I GLC  ++ + A   + E   +    + +  N+I+  +CK G    
Sbjct: 406 GLSPGNIVYNSL-IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 464

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           ++ LF LM++ G+ PD  +Y+ LI G C+AG M+EA++  + M   G++P+ +TY  L  
Sbjct: 465 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLIN 524

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+  +S++  A  + +++   G  PDI+TY +++ G  Q        +L   +   G ++
Sbjct: 525 GYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 584

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +  Y+++L  +CK+   D+AL +   +  + LK +  T++I+I  L K  +  +A  L+
Sbjct: 585 ELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLF 644

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
               S  + PN + +  +   +  + ++ E    F S+  + C  D  + N ++   ++ 
Sbjct: 645 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 704

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           G I  A      + EK  S    T  SL       GK  +  R L
Sbjct: 705 GEITRAGTYLSMIDEKHFSLEAST-ASLFIDLLSGGKYQEYHRFL 748


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/559 (27%), Positives = 268/559 (47%), Gaps = 36/559 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPR 61
           Y + G       ++ +M+ +   + + ++YN +L  L   +   +  +++ D+   + P 
Sbjct: 150 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP 209

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            ++T  +V+  LC  + +  A+  L++       P+ V    ++    K      A  L 
Sbjct: 210 TLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 269

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF--- 178
             M   G  PDA ++N +I GLC    + EA +  N M   G  PD ITY  L  G    
Sbjct: 270 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKI 329

Query: 179 -------HLLSQISGAWKVIQKLLIKG--------------SD--------PDIVTYTVL 209
                   L  +I     VI   LI G              SD        PD+ TY  L
Sbjct: 330 GRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 389

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I GY + G V   L++   M ++G K NV +Y++L+   CK G+IDEA  LL EM A GL
Sbjct: 390 IYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGL 449

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           KP+ V ++ LI   CK+ ++ +A++++ EM  K   P+ +   +++ GLCE + I  A  
Sbjct: 450 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 509

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               +I    + + V YN +I+ +++ G I EA +L  +++ +      +T+NSLI G C
Sbjct: 510 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLC 569

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           + G+V  AR L + +   GL PS+++    +N  C  G ++  +   +EM  +   P  V
Sbjct: 570 RAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 629

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           T+  +I GLC+  ++++ + +   +   G+ PD +TYNT++   CK   +  A  LL++ 
Sbjct: 630 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEG 689

Query: 510 WLHNLEPTSATYNILIDGL 528
                 P   T++IL+  L
Sbjct: 690 IEDGFVPNDRTWSILLQSL 708



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 250/529 (47%), Gaps = 32/529 (6%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+  S N ++         +VA  +F  ML   + P  F++ +++  LC    ++ AL  
Sbjct: 174 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSV 233

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             DM +HG  P+++ Y  L       ++++ A ++++++ + G  PD  T+  +I G C+
Sbjct: 234 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 293

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME---------- 265
              + E  K+   ML +GF  + I Y  L++ +CK GR+D A  L Y +           
Sbjct: 294 FDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTL 353

Query: 266 ----------------------AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
                                 + G+ PD+ TY+ LI G  K+  V  A+++  +M +K 
Sbjct: 354 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKG 413

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN +++  ++ G C+   I EA    + +       + V +N +I  + K   I EAV
Sbjct: 414 CKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 473

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +++R++  K   P + TFNSLI G C+  ++  A  LL  +   G+  + VTY T +NA+
Sbjct: 474 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 533

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
              G I+    L+ EM  +      +TY  +IKGLC+  ++ +A  L E M   G+ P  
Sbjct: 534 LRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSS 593

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           I+ N +I   C+   + +A +   +M L    P   T+N LI+GLC  G +++   +   
Sbjct: 594 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 653

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           LQ   I    V Y T++   C  G V+ A     + +E GF  + R ++
Sbjct: 654 LQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWS 702



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 246/507 (48%), Gaps = 37/507 (7%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I++ G C +     A     +   ++  P++ +   +M   C +   + A  +   M K+
Sbjct: 185 ILVSGNCHKV----AANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKH 240

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  P++  Y  LIH L     + EAL+   +M   G  PDA T++ +  G     +I+ A
Sbjct: 241 GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEA 300

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL---------------------- 225
            K++ ++LI+G  PD +TY  L+ G C+IG V+    L                      
Sbjct: 301 AKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTH 360

Query: 226 ----------REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
                      +++ S G   +V  Y+ L+    K G +  AL +L +M   G KP++ +
Sbjct: 361 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYS 420

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+IL+ G CK  K+ +A  L NEM +  + PN+     ++   C++  I EA   F  + 
Sbjct: 421 YTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 480

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C  DV  +N +I G  ++  I  A+ L R +I + +  + VT+N+LI  F + G++ 
Sbjct: 481 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 540

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +AR+L++ +   G     +TY + +   C  G + +  +L ++M    + P+ ++  ++I
Sbjct: 541 EARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILI 600

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLC+   ++EAV+  ++M + G TPD +T+N++I   C+   +     +  ++    + 
Sbjct: 601 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 660

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLV 542
           P + TYN L+  LC  G + +A CLL+
Sbjct: 661 PDTVTYNTLMSWLCKGGFVYDA-CLLL 686



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 216/434 (49%), Gaps = 40/434 (9%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           VI GLC+  R+ +A   +     + F P  ++   +M+  CK+G  + AK LF  + K  
Sbjct: 287 VILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-- 344

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLLSQISGA 187
             P +  +N LIHG    G +++A    +DM   +G+ PD  TY+ L  G+     +  A
Sbjct: 345 --PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLA 402

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            +V++ +  KG  P++ +YT+L+ G+C++G ++E   L   M + G K N + ++ L+S+
Sbjct: 403 LEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISA 462

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            CK  RI EA+ +  EM   G KPD+ T++ LI GLC+ D++  A+ L  +M S+ +  N
Sbjct: 463 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 522

Query: 308 S-----------------------------------FAHGAILLGLCEKEMITEARMYFD 332
           +                                     + +++ GLC    + +AR  F+
Sbjct: 523 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFE 582

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            ++    +   +  NI+I+G  + G + EAV+  ++++ +  +P IVTFNSLI G C+ G
Sbjct: 583 KMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 642

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           ++ D   +   ++  G+ P  VTY T M+  C+ G +     LL E       P   T++
Sbjct: 643 RIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWS 702

Query: 453 VVIKGLCKQWKLQE 466
           ++++ L  Q  L  
Sbjct: 703 ILLQSLVPQETLDR 716



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 220/462 (47%), Gaps = 25/462 (5%)

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  V   +L +   P + T+ V++   C +  V+  L +   M   G   N + Y  L+ 
Sbjct: 195 AANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIH 254

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           S+ K  R++EAL LL EM  +G  PD  T++ +I GLCK D++++A ++ N M  +  +P
Sbjct: 255 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTP 314

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +G ++ GLC+   +  A+  F  +         V++N +I G+V  G + +A  + 
Sbjct: 315 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTS----VIFNTLIHGFVTHGRLDDAKAVL 370

Query: 367 RQLIEKR-ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++    I P + T+NSLIYG+ K G V  A  +L  ++  G +P+  +YT  ++ +C+
Sbjct: 371 SDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCK 430

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G I     LL EM    + P  V +  +I   CK+ ++ EAV++  +M   G  PD  T
Sbjct: 431 LGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 490

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           +N++I   C+  +++ A  LL  M    +   + TYN LI+     G++K A  L+  + 
Sbjct: 491 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 550

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
                L ++ Y ++IK  C  G+V KA                    +S F  ML +G  
Sbjct: 551 FQGSLLDEITYNSLIKGLCRAGEVDKA--------------------RSLFEKMLRDGLV 590

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           P    C +++    + G +    E    M+  G  PD    N
Sbjct: 591 PSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 632



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 194/374 (51%), Gaps = 4/374 (1%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVA 117
           P +V  N++ I G     RL DA   L +     +G  P V + N+++  Y K G   +A
Sbjct: 345 PTSVIFNTL-IHGFVTHGRLDDAKAVLSDMV-TSYGIVPDVCTYNSLIYGYWKKGLVGLA 402

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             +   M   G  P+ +SY IL+ G C  G ++EA    N+M   G++P+ + ++ L   
Sbjct: 403 LEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISA 462

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    +I  A ++ +++  KG  PD+ T+  LI G C++  ++  L L   M+S+G   N
Sbjct: 463 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 522

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + Y+ L+++  + G I EA  L+ EM   G   D +TY+ LI+GLC+  +V KA  L+ 
Sbjct: 523 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFE 582

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M    + P+S +   ++ GLC   M+ EA  +   +++     D+V +N +I+G  + G
Sbjct: 583 KMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 642

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            I + + ++R+L  + I P  VT+N+L+   CK G V DA  LLD     G  P+  T++
Sbjct: 643 RIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWS 702

Query: 418 TFMNAYCEEGNIQR 431
             + +   +  + R
Sbjct: 703 ILLQSLVPQETLDR 716



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 170/360 (47%), Gaps = 39/360 (10%)

Query: 10  GMVHDAVFVIAKM-KELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYT 65
           G + DA  V++ M     +   + TYNSL+Y      ++    ++  D++      NVY+
Sbjct: 361 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYS 420

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            +I++DG C+  ++ +A   L E +     P+ V  N ++S +CK      A  +F  M 
Sbjct: 421 YTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 480

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G  PD +++N LI GLC    ++ AL    DM   GV  + +TY+ L   F    +I 
Sbjct: 481 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 540

Query: 186 GAWKVIQKLLIKGSDPDIVTYT-----------------------------------VLI 210
            A K++ +++ +GS  D +TY                                    +LI
Sbjct: 541 EARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILI 600

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C+ G VEE ++ ++ M+ +G   +++ ++ L++ +C++GRI++ L +  +++A G+ 
Sbjct: 601 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 660

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD VTY+ L+  LCK   V+ A  L +E       PN      +L  L  +E +     Y
Sbjct: 661 PDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDRRTFY 720



 Score = 39.3 bits (90), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 42/198 (21%), Positives = 83/198 (41%), Gaps = 21/198 (10%)

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y V+I  L    + +   +LL  M   G+   +  + +I+R + K     +  +L+ +M 
Sbjct: 108 YQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 167

Query: 511 -LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
            +++ EPT  +YN++++ L      K A  +   +    I  T   +  ++KA CA  +V
Sbjct: 168 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEV 227

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
             A++             +RD TK        +G  P+  I + ++ +  +   +    +
Sbjct: 228 DSALSV------------LRDMTK--------HGCVPNSVIYQTLIHSLSKCNRVNEALQ 267

Query: 630 LAAVMIKSGLLPDKFLIN 647
           L   M   G +PD    N
Sbjct: 268 LLEEMFLMGCVPDAETFN 285


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 228/415 (54%), Gaps = 3/415 (0%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
           GP V++ NA+++ YC  G  + A+ L   M    + PDA++YN LI GLC  G    AL 
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALA 179

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
             ++M R    PD +TY+IL +     S    A K++ ++  KG  PDIVTY V++ G C
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 239

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           Q G V++ ++  + + S G + N ++Y+++L  +C + R ++A  L+ EM   G  P++V
Sbjct: 240 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 299

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           T+++LI  LC++  V  A+++  ++     +PNS ++  +L   C+++ + +A  + D +
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           +   C  D+V YN ++    + G +  AV+L  QL +K  +P ++++N++I G  K GK 
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 419

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +A  LL+ +   GL+P  +TY+T     C E  I+  +    +++   I P  V Y  +
Sbjct: 420 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 479

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           I GLCK+ +   A+ L   M   G  P++ TY  +I        +++A  LL+++
Sbjct: 480 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 534



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 224/419 (53%), Gaps = 3/419 (0%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD  +YN ++ G C AG ++ A     +M    VEPDA TY+ L +G     + + A  V
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAV 180

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           + ++L +   PD+VTYT+L+   C+    ++ +KL + M  +G   +++ Y+V+++ +C+
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            GR+D+A+  L  + + G +P+ V+Y+I+++GLC  ++   A +L  EM  K   PN   
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
              ++  LC K ++  A    + +    C  + + YN ++  + K   + +A+     ++
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            +   P IV++N+L+   C++G+V  A  LL  +K  G  P  ++Y T ++   + G  +
Sbjct: 361 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 420

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             L LL EM +K + P  +TY+ +  GLC++ ++++A++    +  +G+ P+ + YN II
Sbjct: 421 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 480

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
              CK ++   A  L   M  +   P  +TY ILI+GL   G +K A  LL  L    +
Sbjct: 481 LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 223/454 (49%), Gaps = 8/454 (1%)

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            PDA +   LI  L  +G   EA       G     PD + Y+ +  G+    Q+  A +
Sbjct: 93  RPDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMVAGYCGAGQLDAARR 147

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           ++ ++ +   +PD  TY  LI G C  G     L + + ML +    +V+ Y++LL + C
Sbjct: 148 LVAEMPV---EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATC 204

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K     +A+ LL EM   G  PD+VTY++++ G+C++ +V  AI+    + S    PN+ 
Sbjct: 205 KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 264

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
           ++  +L GLC  E   +A      +    C  +VV +N++I    + G +  A+++  Q+
Sbjct: 265 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 324

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            +   +P+ +++N L++ FCK  K+  A   LD +   G  P  V+Y T + A C  G +
Sbjct: 325 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 384

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
              + LL +++ K   P  ++Y  VI GL K  K +EA++LL +M   G+ PD ITY+TI
Sbjct: 385 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 444

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
               C+   +  A +   ++    + P +  YN +I GLC   +  +A  L   +  +  
Sbjct: 445 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 504

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
              +  YT +I+    EG + +A     ++  +G
Sbjct: 505 MPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 538



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 221/453 (48%), Gaps = 12/453 (2%)

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           +  L   G ++EAL       R    PDA T + L K      + + A +V+        
Sbjct: 72  LRSLVRRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVLA-----AC 122

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            PD++ Y  ++ GYC  G ++     R ++     + +   Y+ L+  +C  GR   AL 
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAA---RRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALA 179

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           +L EM      PD+VTY+IL+   CK+    +A++L +EM  K  +P+   +  ++ G+C
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 239

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           ++  + +A  +  +L    C  + V YNI++ G        +A +L  ++ +K   P++V
Sbjct: 240 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 299

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           TFN LI   C+ G V  A  +L+ I  +G  P++++Y   ++A+C++  + + +A L  M
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
            ++   P  V+Y  ++  LC+  ++  AV+LL  +   G  P  I+YNT+I    K    
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 419

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
           ++A +LLN+M    L+P   TY+ +  GLC    +++A      +Q+  I    V Y  I
Sbjct: 420 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 479

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           I   C   + H A+  F  M+  G   +   YT
Sbjct: 480 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYT 512



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 179/325 (55%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L D+++      ++ T ++V++G+CQ+ R+ DAI FL+        P+ VS N ++   C
Sbjct: 215 LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 274

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
                E A+ L   M + G  P+  ++N+LI  LC  G +E ALE    + ++G  P+++
Sbjct: 275 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 334

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+ L   F    ++  A   +  ++ +G  PDIV+Y  L+   C+ G V+  ++L   +
Sbjct: 335 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 394

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
             +G    +I+Y+ ++  + K+G+  EAL LL EM + GL+PD++TYS +  GLC++D++
Sbjct: 395 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 454

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             AI+ + ++    I PN+  + AI+LGLC++     A   F  +I + C+ +   Y I+
Sbjct: 455 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 514

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRI 374
           I+G    G I EA  L  +L  + +
Sbjct: 515 IEGLAYEGLIKEARDLLDELCSRGV 539



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 116/269 (43%), Gaps = 32/269 (11%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           ML     R G+V  A+ V+ ++ +     +  +YN LL+                     
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLH--------------------- 341

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
                        C+Q ++  A+ FL     +   P +VS N +++  C+ G  +VA  L
Sbjct: 342 -----------AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 390

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              +   G  P   SYN +I GL  AG  +EALE  N+M   G++PD ITYS +A G   
Sbjct: 391 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 450

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +I  A +   K+   G  P+ V Y  +I G C+       + L   M+  G   N   
Sbjct: 451 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNEST 510

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           Y++L+  +   G I EA  LL E+ + G+
Sbjct: 511 YTILIEGLAYEGLIKEARDLLDELCSRGV 539


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/527 (29%), Positives = 254/527 (48%), Gaps = 11/527 (2%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQE--TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +T   ++D L +  R+++A+    E   AGK+    V+    +M  YC       A  LF
Sbjct: 263 FTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKM--DVIVATTLMRGYCLRQEVGNALNLF 320

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              LK G+ P    Y +LI G    G  ++A E    M   G+ P     S++ KG  LL
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKG--LL 378

Query: 182 SQISGAWKVIQKLLIKGSD---PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
           +     WK    L  + +D   PD+ TY  LI  +CQ   + E L L + M   G K ++
Sbjct: 379 NDRR--WKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSI 436

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+ LL   CK G +DEA+ L  EM   G KP++VTY  L+RG   +     A  L +E
Sbjct: 437 NTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDE 496

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M    +S N + +  ++ G+C  + + E      S +    I  ++ YN +I+G+VK G 
Sbjct: 497 MKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGM 556

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +G A  +Y+Q+ EK + P+I+T+ S I G+C+ G    A ++L+ ++  GL+P  V Y  
Sbjct: 557 MGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNA 616

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +N +C+EGN+   L LL  +    + P  V Y  +I G      ++E  +  E M   G
Sbjct: 617 LINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGG 676

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           +  D  TY T+I  F K  ++  A +L ++M      P + T+  L  GLC +GD+  A 
Sbjct: 677 IVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAK 736

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            LL  ++  ++      Y  +I  +  +  + +A     +M+  G +
Sbjct: 737 KLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQ 783



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 214/424 (50%), Gaps = 1/424 (0%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S+V+ GL    R +DA+   +E A     P V + N ++  +C+      A  LF  M K
Sbjct: 371 SLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKK 429

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G+ P   +YN L+ G C  G M+EA++  ++M   G +P+ +TY  L +G+        
Sbjct: 430 AGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDN 489

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A+ ++ ++   G   +  TY VLI G C +  V E   + +  +S+GF   ++ Y+ +++
Sbjct: 490 AYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIIN 549

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
              K+G +  A  +  +M   GL P+++TY+  I G C+      A+++ N++  + + P
Sbjct: 550 GFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQP 609

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +  A+ A++ G C++  ++ A      L+      + V+YN +I GY  L  + E  + Y
Sbjct: 610 DIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFY 669

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             +I+  I     T+ +LI GF K+G VA A  L   +   G  P A T+T   +  C  
Sbjct: 670 ESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRS 729

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G+I     LL+EM    + P    Y ++I G  +  KLQEA +L ++M  +G+ PD  TY
Sbjct: 730 GDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTY 789

Query: 487 NTII 490
           + ++
Sbjct: 790 DILV 793



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/586 (24%), Positives = 257/586 (43%), Gaps = 60/586 (10%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P + S   ++ R  +   A+ A  LF  M   G   DA+ ++ L+      G  E+A+  
Sbjct: 155 PDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRL 214

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            ++M    ++PD   Y++       L     A ++++++   G D    TY  ++    +
Sbjct: 215 FDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVK 274

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G +EE L++ + M   G K++VI  + L+   C    +  AL L  E    G+ P  V 
Sbjct: 275 TGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVM 334

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y +LIRG  +     KA +L  +M  + + P++F    +L GL       +A   F+ + 
Sbjct: 335 YGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMA 394

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            S  + DV  YN +I  + +   + EA+ L+ ++ +  + PSI T+NSL+ G+CK G + 
Sbjct: 395 DSG-LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMD 453

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG---------- 445
           +A +L   + + G +P+ VTY T M  Y  + +     ALL EM+   +           
Sbjct: 454 EAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLI 513

Query: 446 -------------------------PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
                                    PT +TY  +I G  K   +  A  + + M   G+ 
Sbjct: 514 NGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLP 573

Query: 481 PDQITYNTIIRSFCK--CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           P+ ITY + I  +C+  C D+  A ++LN +    L+P    YN LI+G C  G++ +A 
Sbjct: 574 PNIITYTSFIDGYCRTGCSDM--ALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHAL 631

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            LLV L +  ++   V Y ++I  +     + +   F+  M++ G       YT      
Sbjct: 632 QLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYT------ 685

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                          ++  F + G++    EL + M+  G +PD F
Sbjct: 686 --------------TLIDGFSKDGNVAFALELYSEMMAKGYIPDAF 717



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 214/419 (51%), Gaps = 2/419 (0%)

Query: 37  LLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGP 96
           LL + R  D +  L++++  S  P +V+T + +I   CQ  +L++A+            P
Sbjct: 377 LLNDRRWKDAVC-LFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKP 434

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           S+ + N+++  YCK G  + A  L+  M   G  P+  +Y  L+ G       + A    
Sbjct: 435 SINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALL 494

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           ++M ++GV  +  TY++L  G  ++ ++     +++  + +G  P ++TY  +I G+ + 
Sbjct: 495 DEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKA 554

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G +     + + M  +G   N+I Y+  +   C++G  D AL +L ++   GL+PD+V Y
Sbjct: 555 GMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAY 614

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + LI G C++  +  A+QL   +    ++PN+  + +++ G     M+ E   +++S+I 
Sbjct: 615 NALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIK 674

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
              + D   Y  +IDG+ K GN+  A++LY +++ K   P   TF +L +G C++G +  
Sbjct: 675 GGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDG 734

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           A++LL+ ++   + P+   Y   +N Y  +  +Q    L  EM    I P   TY +++
Sbjct: 735 AKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 138/551 (25%), Positives = 238/551 (43%), Gaps = 53/551 (9%)

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
               A   +  M+  G+ PD  S   L+       S ++AL    +M   G   DA  + 
Sbjct: 137 LPSAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFD 196

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L            A ++  ++     DPD   Y + I   C++G+    L++   M   
Sbjct: 197 ALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEV 256

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           GF      Y  ++  + K+GR++EAL +  EM   G K D++  + L+RG C + +V  A
Sbjct: 257 GFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNA 316

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           + L+ E     I P                                     V+Y ++I G
Sbjct: 317 LNLFKETLKDGIVPTK-----------------------------------VMYGVLIRG 341

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
             ++G   +A +L RQ+  + + PS    + ++ G   + +  DA  L + +   GL P 
Sbjct: 342 CDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PD 400

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             TY   ++ +C+   ++  L L   M+   + P+  TY  ++ G CK+  + EAV+L  
Sbjct: 401 VFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYS 460

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +M + G  P+ +TY T++R +   KD   A+ LL++M  + +     TYN+LI+G+C+  
Sbjct: 461 EMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVD 520

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            +   D +L S        T + Y +II      G +  A T + QM EKG   +I  YT
Sbjct: 521 RVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYT 580

Query: 593 KSF---FCM---------MLSN----GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
            SF   +C          ML++    G  PD      ++  F Q G++    +L  +++K
Sbjct: 581 -SFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLK 639

Query: 637 SGLLPDKFLIN 647
            GL P+  + N
Sbjct: 640 DGLAPNTVVYN 650



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 181/412 (43%), Gaps = 73/412 (17%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL------------------------------ 41
           + +A+ +  +MK+  +K SI TYNSLL                                 
Sbjct: 417 LREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYIT 476

Query: 42  --------RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKE 93
                   +  D  + L D++K +    N YT +++I+G+C   R+ +    L+    + 
Sbjct: 477 LMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEG 536

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           F P++++ N+I++ + K G    A  ++  M + GL P+  +Y   I G C  G  + AL
Sbjct: 537 FIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMAL 596

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           +  ND+ R G++PD + Y+ L  GF     +S A +++  LL  G  P+ V Y  LI GY
Sbjct: 597 KMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGY 656

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
             +  ++E  K  E M+  G   +   Y+ L+    K G +  AL L  EM A G  PD 
Sbjct: 657 KNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDA 716

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            T++ L  GLC+   +  A +L  EM    + PN F                        
Sbjct: 717 FTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVF------------------------ 752

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
                      +YN++I+GY++   + EA +L+ +++   I P   T++ L+
Sbjct: 753 -----------IYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 32/275 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + + GM+  A  V  +M+E  L  +I TY S                             
Sbjct: 551 FVKAGMMGSAFTVYQQMREKGLPPNIITYTSF---------------------------- 582

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
               IDG C+      A+  L +   +   P +V+ NA+++ +C+ G    A  L  ++L
Sbjct: 583 ----IDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILL 638

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K GL P+   YN LI G      M+E  +F   M + G+  D  TY+ L  GF     ++
Sbjct: 639 KDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVA 698

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A ++  +++ KG  PD  T+T L  G C+ G+++   KL E M     + NV  Y++L+
Sbjct: 699 FALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLI 758

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
           +   +  ++ EA  L  EM  +G++PD  TY IL+
Sbjct: 759 NGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 241/458 (52%), Gaps = 8/458 (1%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N  T + +++G  +Q R  D    L+  A ++  P+VVS N ++   CKL     A+ 
Sbjct: 7   PPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEE 66

Query: 120 LFCLMLKYGLH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           L   M+  G    PD  +Y+ L+ G C AG +EE+ E   ++   G+ PDA+ Y+ +   
Sbjct: 67  LVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVAS 126

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
               +++  A +++++++  G  P ++T+  LI G C+  N+E    L + M + G K +
Sbjct: 127 LCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKAD 186

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V+ Y+ L+  +CK+GR+ EA  LL  M+A G  PD+V YS  + GLCK  KV  A Q+  
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLE 246

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN-CIQDVVLYNIMIDGYVKL 356
           +M      PN   +  IL GLC+   I  A    + +  S+ C  +VV Y+ ++DG  KL
Sbjct: 247 QMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   EA  +   +      P +VT++SL+ G CK GK+ +A   +  + + G +P+AVTY
Sbjct: 307 GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTY 366

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIG-----PTHVTYTVVIKGLCKQWKLQEAVQLL 471
            + ++  C  G +     +++EM +   G     P+  TY  +I GLCK  ++ +A++  
Sbjct: 367 CSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFF 426

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           + M   G  PD ++Y+TI+    +     +A  +L+++
Sbjct: 427 QRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 246/457 (53%), Gaps = 8/457 (1%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M + G  P++ ++N L++G    G   +       M    ++P+ ++Y+ L +G   L +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 184 ISGAWKVIQKLLIKG--SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
              A ++++ ++ +G  S PD+VTY+ L+ GYC+ G VEE  +L + ++S+G + + + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +++S+CKS R+ EAL LL EM   G  P L+T++ LI G C++  +  A  L  +M +
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +  +   +  ++ GLC+   + EA    + +  S C  DVV Y+  + G  K G + +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI-KLHGLEPSAVTYTTFM 420
           A Q+  Q+ +    P++VT+N+++ G CK+GK+  A  +++ +    G   + V Y+T +
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C+ G  Q   ++++ M      P  VTY+ ++ GLCK  K++EAV+ + +M + G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL-----EPTSATYNILIDGLCVNGDLK 535
           P+ +TY +++   C C  L +A +++ +M           P+ +TYN LI GLC  G + 
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
           +A      ++        V+Y+TI++     G   +A
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 238/458 (51%), Gaps = 8/458 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+ V+ NA+++ + K G     + L   M    + P+  SYN L+ GLC      EA E 
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 156 TNDMGRHG--VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
             DM   G    PD +TYS L  G+    ++  + +++++++ +G  PD + YT ++   
Sbjct: 68  VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+   + E L+L E M+  G    +I ++ L+S  C+   ++ A  LL +M A G+K D+
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADV 187

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VTY+ L+ GLCK  ++ +A QL   M +   +P+  A+ + + GLC+   + +A    + 
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQ 247

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR-ISPSIVTFNSLIYGFCKNG 392
           +  S+   +VV YN ++DG  K G I  A+++  Q+        ++V +++++ G CK G
Sbjct: 248 MRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           +  +AR +++ +   G  P  VTY++ +N  C+ G I+  +  ++EM  +   P  VTY 
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYC 367

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIG-----VTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            ++ GLC   +L EA +++E+M   G       P   TYN +I   CK   +  A +   
Sbjct: 368 SLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQ 427

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           +M     +P   +Y+ +++GL  +G    A+ +L  ++
Sbjct: 428 RMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 236/453 (52%), Gaps = 11/453 (2%)

Query: 33  TYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE- 88
           T+N+L+          D   L + +   +   NV + + +++GLC+  R  +A   +++ 
Sbjct: 12  TFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDM 71

Query: 89  -TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
            + G    P +V+ + ++S YCK G  E ++ L   ++  GL PDA  Y  ++  LC + 
Sbjct: 72  ISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSA 131

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            + EALE   +M R G  P  IT++ L  G      +  A  ++QK+   G   D+VTY 
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYN 191

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            L+ G C+ G ++E  +L E M + G   +V+AYS  +  +CKSG++ +A  +L +M   
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDS 251

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR-ISPNSFAHGAILLGLCEKEMITE 326
              P++VTY+ ++ GLCK  K+  A+++  +M S      N   +  ++ GLC+     E
Sbjct: 252 HHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           AR   +++  + C  DVV Y+ +++G  K G I EAV+  R++  +   P+ VT+ SL++
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371

Query: 387 GFCKNGKVADARRLLDTIKLHGL-----EPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           G C  G++A+A R+++ +   G       PS  TY   +   C+ G I   L   Q M +
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS 431

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           +   P  V+Y+ +++GL +  +  +A  +L ++
Sbjct: 432 QGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 168/332 (50%), Gaps = 3/332 (0%)

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M+  G  P+ VT++ L+ G  KQ +     +L   M ++ I PN  ++  +L GLC+ E 
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 324 ITEARMYFDSLIM--SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             EA      +I        D+V Y+ ++ GY K G + E+ +L +++I + + P  + +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
             ++   CK+ ++ +A  LL+ +   G  P+ +T+ T ++  C E N++   +LLQ+M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
             +    VTY  ++ GLCK  +LQEA QLLE M   G  PD + Y++ +   CK   +  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN-ISLTKVAYTTII 560
           A Q+L QM   + +P   TYN ++DGLC +G +  A  ++  +   +   L  V Y+T++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
              C  G   +A +    M   G    +  Y+
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYS 332



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 181/358 (50%), Gaps = 3/358 (0%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   G   N + ++ L++   K GR  +   LL  M A  ++P++V+Y+ L+ GLCK ++
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 289 VHKAIQLYNEMCSK--RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            H+A +L  +M S+  R +P+   +  +L G C+   + E+R     +I      D ++Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
             ++    K   +GEA++L  ++I     P+++TFN+LI G C+   +  A  LL  +  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G++   VTY T M+  C+ G +Q    LL+ M+     P  V Y+  + GLCK  K+ +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN-LEPTSATYNILI 525
           A Q+LE M      P+ +TYNTI+   CK   +  A +++ QM   +        Y+ ++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           DGLC  G  + A  ++ ++         V Y++++   C  G + +A+    +M  +G
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 143/266 (53%), Gaps = 9/266 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLY---DDIKVSETPRNVY 64
           + G + +A  ++ +MK       +  Y+S +Y L  +  + D +   + ++ S    NV 
Sbjct: 199 KAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVV 258

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKE-FGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           T + ++DGLC+  ++  A+  +++ A  +  G +VV  + ++   CKLG  + A+ +   
Sbjct: 259 TYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M + G  PD  +Y+ L++GLC AG +EEA+E   +M   G +P+A+TY  L  G     +
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR 378

Query: 184 ISGAWKVIQKLLIKGS-----DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
           ++ A ++++++   G       P + TY  LI G C+ G +++ LK  + M SQG   + 
Sbjct: 379 LAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDG 438

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEM 264
           ++YS ++  + +SGR  +A  +L E+
Sbjct: 439 VSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 121/246 (49%), Gaps = 2/246 (0%)

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+ VTFN+L+ GF K G+  D  RLL+T+    ++P+ V+Y   +   C+         L
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 436 LQEMETKA--IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           +++M ++     P  VTY+ ++ G CK  K++E+ +LL+++   G+ PD + Y  ++ S 
Sbjct: 68  VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           CK   L +A +LL +M      PT  T+N LI G C   +L+ AD LL  +    +    
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADV 187

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
           V Y T++   C  G + +A     +M   G    +  Y+   + +  S       ++ E 
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQ 247

Query: 614 MLIAFH 619
           M  + H
Sbjct: 248 MRDSHH 253



 Score = 46.6 bits (109), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 70/176 (39%), Gaps = 22/176 (12%)

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G  P+ +T+N ++  F K        +LL  M   +++P   +YN L++GLC    
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 534 LKNADCLLVSLQEHNISLTK--VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
              A+ L+  +       T   V Y+T++  +C  G V ++     +++ +G       Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           TK                    ++ +  +   LG   EL   MI++G  P     N
Sbjct: 121 TK--------------------VVASLCKSARLGEALELLEEMIRAGCCPTLITFN 156


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/479 (30%), Positives = 241/479 (50%), Gaps = 35/479 (7%)

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
           +G++P+ ++ SIL   +  L Q+  A+ +  K+L  G  P+ +T T L+ G+C    V+E
Sbjct: 100 NGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKE 159

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            L   + +L+ GF  N ++Y  L++ +CK G    AL +L ++E   +  D+V YS +I 
Sbjct: 160 ALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIID 219

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           GLCK   V+ A +LY+EM +KRISP      +++ G C      EA      +++ N   
Sbjct: 220 GLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINP 279

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           DV  +NI++D   K G I EA      ++++ + P +VT++SL+ G+C   +V  A+ + 
Sbjct: 280 DVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV- 338

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
                         Y+  +N +C+   + + L+L  EM  + I P  VTY  +I GLCK 
Sbjct: 339 --------------YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKS 384

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++  A +L+++M   G   D ITYN++I + CK   + KA  L+ ++    ++    TY
Sbjct: 385 GRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTY 444

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           NILIDGLC  G LK+A  +   L     +LT   YT +I   C EG +++A T   +M +
Sbjct: 445 NILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMED 504

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                               NG  PD   CE ++ A  +        +L   MI  GLL
Sbjct: 505 --------------------NGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGLL 543



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 180/348 (51%), Gaps = 15/348 (4%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V   S +IDGLC+   + DA     E   K   P+VV+LN+++  YC +G  + A GL 
Sbjct: 210 DVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLL 269

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+   ++PD +++NIL+  LC  G ++EA      M + GV PD +TYS L  G+ L+
Sbjct: 270 REMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLV 329

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           ++++ A  V               Y+++I G+C+I  V++ L L   M  +    + + Y
Sbjct: 330 NEVNKAKHV---------------YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTY 374

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+  +CKSGRI  A  L+ EM   G   D++TY+ LI  LCK   V KAI L  ++  
Sbjct: 375 NSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKD 434

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + I  + + +  ++ GLC++  + +A++ F  L++      V  Y IMI+G    G + E
Sbjct: 435 QGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNE 494

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           A  L  ++ +    P  VT  ++I    +N K   A +LL  +   GL
Sbjct: 495 AETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGL 542



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 181/376 (48%), Gaps = 15/376 (3%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+GLC+    + A+  L++  GK     VV  + I+   CK      A  L+  M+   
Sbjct: 182 LINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKR 241

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + P   + N LI+G CI G  +EA     +M    + PD  T++IL        +I  A 
Sbjct: 242 ISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAK 301

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
             I  ++ +G  PD+VTY+ L+ GYC +  V +   +               YS++++  
Sbjct: 302 SGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV---------------YSIVINGF 346

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK   +D+AL L YEM    + PD VTY+ LI GLCK  ++  A +L +EM       + 
Sbjct: 347 CKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADI 406

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             + +++  LC+   + +A      +       D+  YNI+IDG  K G + +A  +++ 
Sbjct: 407 ITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQD 466

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           L+ K  + ++ T+  +I G C  G + +A  LL  ++ +G  P AVT  T + A  E   
Sbjct: 467 LLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDK 526

Query: 429 IQRLLALLQEMETKAI 444
            +R   LL+EM  + +
Sbjct: 527 NERAEKLLREMIARGL 542



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 162/338 (47%)

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +P+    G IL  L + +        F  L  +    ++V  +I+I+ Y  LG +  A  
Sbjct: 68  APSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFS 127

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           ++ ++++    P+ +T  +L+ GFC N KV +A    D +   G   + V+Y T +N  C
Sbjct: 128 IFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLC 187

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G  +  L +L+++E K +    V Y+ +I GLCK   + +A +L  +M    ++P  +
Sbjct: 188 KIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVV 247

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           T N++I  +C     ++AF LL +M L N+ P   T+NIL+D LC  G +K A   +  +
Sbjct: 248 TLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVM 307

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
            +  +    V Y++++  +C   +V+KA   +  ++    +I + D   S F  M     
Sbjct: 308 MKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRI 367

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            PD      ++    + G +   +EL   M  SG   D
Sbjct: 368 APDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPAD 405



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 158/318 (49%), Gaps = 23/318 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVY 64
           +  +V+DA  + ++M    +  ++ T NSL+Y    +      + L  ++ +     +VY
Sbjct: 223 KDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVY 282

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC--------------- 109
           T +I++D LC++ ++++A   +     +   P VV+ +++M  YC               
Sbjct: 283 TFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIV 342

Query: 110 -----KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
                K+   + A  LF  M    + PD  +YN LI GLC +G +  A E  ++M   G 
Sbjct: 343 INGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQ 402

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
             D ITY+ L         +  A  +++K+  +G   D+ TY +LI G C+ G +++   
Sbjct: 403 PADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQV 462

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           + + +L +G+ L V  Y+++++ +C  G ++EA  LL +ME  G  PD VT   +IR L 
Sbjct: 463 IFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALF 522

Query: 285 KQDKVHKAIQLYNEMCSK 302
           + DK  +A +L  EM ++
Sbjct: 523 ENDKNERAEKLLREMIAR 540



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 127/285 (44%), Gaps = 20/285 (7%)

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           ++ + V  + +++    +PS++ F  ++    K         L   ++ +G++P+ V+ +
Sbjct: 51  HVDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLS 110

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N YC  G ++   ++  ++      P  +T T ++KG C   K++EA+   + +  +
Sbjct: 111 ILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLAL 170

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G   +Q++Y T+I   CK  + R A Q+L Q+    +      Y+ +IDGLC +  + +A
Sbjct: 171 GFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDA 230

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             L   +    IS T V   ++I  +C  G   +A     +MV K               
Sbjct: 231 YELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNIN------------ 278

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                   PD     +++ A  + G +       AVM+K G++PD
Sbjct: 279 --------PDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPD 315


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 155/587 (26%), Positives = 276/587 (47%), Gaps = 38/587 (6%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+V + N ++  +CK+G   +A     L+    +  D  +YN +I G C  G + +A  F
Sbjct: 43  PNVYTHNVLVHAWCKMGNLILA---LDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGF 99

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + M +     D IT +IL KGF  +       +++  L+  G+  D++ +  LI GYC+
Sbjct: 100 LSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCK 159

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM----------- 264
            G +   L L E M  +G   ++++Y+ L++  CK G  D+A  LL+E+           
Sbjct: 160 AGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVF 219

Query: 265 ----------EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
                     + + L+ DL+TY+ +I   CKQ  + +A  LY EM      P+   + +I
Sbjct: 220 FNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSI 279

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + GLC+   ++EA+     +       + V Y  +ID   K G+  EA     QL+ + +
Sbjct: 280 VNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGM 339

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
           +  +V   +L+ G  K+ K  +A  +   +    L P+++TYT  ++ YC+ G+++R+ +
Sbjct: 340 TLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVES 399

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           LLQEME K I P  +TY+ +I G  K+  L EA+ +++ M    + P+   Y  +I  +C
Sbjct: 400 LLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYC 459

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K      A  L N+M L  L+  +  +++L++ L     +  A+ LL  +    + L  V
Sbjct: 460 KAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHV 519

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT--------------KSFFCMML 600
            YT+++      G    A+    +M EK     +  Y               KS +  M+
Sbjct: 520 NYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMI 579

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             G  P+Q    +M+ A+ + G+L +  EL   M    ++P     N
Sbjct: 580 EMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCN 626



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 172/691 (24%), Positives = 321/691 (46%), Gaps = 76/691 (10%)

Query: 22  MKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRNVYTNSI---------- 68
           M++ ++  ++  +N L+Y+     ++    D+Y ++  S  P NVYT+++          
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 69  ----------------------VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMS 106
                                 VI G CQ   +  A  FL     K+     ++ N ++ 
Sbjct: 61  LILALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVK 120

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
            +C++G A+  + +   ++  G   D   +N LI G C AG M  AL+    M + G+  
Sbjct: 121 GFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLS 180

Query: 167 DAITYSILAKGF----------HLLSQISGAWKVIQKLL------IKGSD-----PDIVT 205
           D ++Y+ L  GF           LL +IS +  V   +       IK  D      D++T
Sbjct: 181 DIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLIT 240

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           YT +I  YC+   +EE   L E M+  GF  +V+ YS +++ +CK GR+ EA  LL EM+
Sbjct: 241 YTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMK 300

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
            +G+ P+ V Y+ LI  L K     +A    +++  + ++ +      ++ GL +     
Sbjct: 301 KMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPK 360

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA   F +L   N I + + Y  +IDGY K+G++     L +++ EK I+P+++T++S+I
Sbjct: 361 EAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSII 420

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G+ K G + +A  ++  +    + P+A  Y   ++ YC+ G  +    L  EM+   + 
Sbjct: 421 NGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLK 480

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
             +V + V++  L +  ++ EA +LL+D+   G+  D + Y +++  F K      A  +
Sbjct: 481 VNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNM 540

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           + +M   ++     TYN+LI+GL  +G  + A  +   + E  ++  +  Y  +IKA+C 
Sbjct: 541 VEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCK 599

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN-----------------GFPPDQ 608
           +G++  A+  + +M  K  +I     T +   + LS                  G  P+ 
Sbjct: 600 QGELDNALELWNEM--KSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNL 657

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
            I  V+L A  + G   +V ++   ++  GL
Sbjct: 658 VIHRVLLNASSKSGKANAVLQMHEQLVDMGL 688



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 167/670 (24%), Positives = 303/670 (45%), Gaps = 59/670 (8%)

Query: 7   SRTGMVHDAVFV-----IAKMKELDLKVSIQTYNSLL--YNLRHT-DIMWDLYDDIKVSE 58
           S +  V D+VF      I K   L+L+  + TY +++  Y  +H  +    LY+++ ++ 
Sbjct: 209 SESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIING 268

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA---- 114
              +V T S +++GLC+  RL +A   L+E       P+ V+   ++    K G A    
Sbjct: 269 FLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAF 328

Query: 115 -------------------------------EVAKGLFCLMLKYGLHPDAFSYNILIHGL 143
                                          + A+ +F  + K  L P++ +Y  LI G 
Sbjct: 329 ACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGY 388

Query: 144 CIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
           C  G ME       +M    + P+ ITYS +  G+     +  A  V++K+L +   P+ 
Sbjct: 389 CKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNA 448

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
             Y +LI GYC+ G  E    L   M   G K+N + + VL++++ +  R+DEA  LL +
Sbjct: 449 YVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKD 508

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           + + GL  D V Y+ L+ G  K  K   A+ +  EM  K I  +   +  ++ GL E   
Sbjct: 509 VTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGK 568

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
             EA+  +  +I      +   YNIMI  Y K G +  A++L+ ++   +I PS +T N+
Sbjct: 569 Y-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNT 627

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L+ G  + G++  A  +L+ + + G+ P+ V +   +NA  + G    +L + +++    
Sbjct: 628 LVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMG 687

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           +      Y  +I   C+    ++A  +L+ M   G   D +TYN +IR +C+   ++KA 
Sbjct: 688 LKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKAL 747

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
               QM    + P   TYN+L+ GL   G +   D L   ++E+ ++     Y T+I  +
Sbjct: 748 ATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGY 807

Query: 564 CAEGDVHKAMTFFCQMVEKGF---------------EISIRDYTKSFFCMMLSNGFPPDQ 608
              G+  +++  +C+MV +GF               ++   D  +     M   G PP  
Sbjct: 808 GKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSS 867

Query: 609 EICEVMLIAF 618
              ++++  +
Sbjct: 868 STYDILICGW 877



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 253/503 (50%), Gaps = 1/503 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T + +IDG C+   ++     LQE   K   P+V++ ++I++ Y K G  + A  + 
Sbjct: 377 NSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVM 436

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML   + P+A+ Y ILI G C AG  E A +  N+M   G++ + + + +L       
Sbjct: 437 KKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRG 496

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A ++++ +  +G   D V YT L+ G+ + G     L + E M  +    +V+ Y
Sbjct: 497 KRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTY 556

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL++ + + G+  EA  +   M  +GL P+  TY+I+I+  CKQ ++  A++L+NEM S
Sbjct: 557 NVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKS 615

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
            +I P+S     +++GL E   I +A    + + +     ++V++ ++++   K G    
Sbjct: 616 HKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANA 675

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            +Q++ QL++  +  +   +N+LI  FC+      A  +L  +   G     VTY   + 
Sbjct: 676 VLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIR 735

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YCE  ++++ LA   +M  + + P  VTY +++ GL     + E  +L + M   G+ P
Sbjct: 736 GYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNP 795

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D  TY+T+I  + K  + +++ +L  +M      P ++TYN+LI      G +  A  LL
Sbjct: 796 DASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELL 855

Query: 542 VSLQEHNISLTKVAYTTIIKAHC 564
             +Q   +  +   Y  +I   C
Sbjct: 856 NEMQVRGVPPSSSTYDILICGWC 878



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 240/486 (49%), Gaps = 18/486 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y + G    A  +  +MK   LKV+   ++ L+ NL+    M D  +++    T R +  
Sbjct: 458 YCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRM-DEAEELLKDVTSRGLLL 516

Query: 66  NSI----VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + +    ++DG  +  +   A+  ++E   K     VV+ N +++   + G  E AK ++
Sbjct: 517 DHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVY 575

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M++ GL P+  +YNI+I   C  G ++ ALE  N+M  H + P +IT + L  G    
Sbjct: 576 SGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEA 635

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  V+ ++ + G  P++V + VL+    + G     L++ E ++  G K+N  AY
Sbjct: 636 GEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAY 695

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C+     +A  +L  M   G   D VTY+ LIRG C+   V KA+  Y +M +
Sbjct: 696 NNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLN 755

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + +SPN   +  +L GL    ++ E    FD +  +    D   Y+ +I GY K+GN  E
Sbjct: 756 EGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKE 815

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           +++LY +++ +   P   T+N LI  F K GK+  AR LL+ +++ G+ PS+ TY   + 
Sbjct: 816 SIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILIC 875

Query: 422 AYC---EEGNIQRLLA---------LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            +C   +  ++ R L          L+ EM  K   P   T   +     +  K+ +A +
Sbjct: 876 GWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEK 935

Query: 470 LLEDMY 475
           LL++++
Sbjct: 936 LLKEIF 941



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 134/555 (24%), Positives = 243/555 (43%), Gaps = 109/555 (19%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M +H + P  + ++ L   F+    +S    +  ++L     P++ T+ VL+  +C++GN
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           +   L L   + +   +++ + Y+ ++   C+ G +++A G L  M       D +T +I
Sbjct: 61  LILALDL---LRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           L++G C+                              +GL +           D+L+   
Sbjct: 118 LVKGFCR------------------------------IGLAKY-----GERIMDNLVSGG 142

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
             +DV+ +N +IDGY K G +  A+ L  ++ ++ +   IV++N+LI GFCK G+   A+
Sbjct: 143 TCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAK 202

Query: 399 RLL------------------DTIKLH---GLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            LL                  D IK      LE   +TYTT ++ YC++  ++   AL +
Sbjct: 203 SLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYE 262

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM      P  VTY+ ++ GLCK  +L EA +LL +M  +GV P+ + Y T+I S  K  
Sbjct: 263 EMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAG 322

Query: 498 DLRKAFQLLNQMWLH-----------------------------------NLEPTSATYN 522
              +AF   +Q+ +                                    NL P S TY 
Sbjct: 323 SAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYT 382

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            LIDG C  GD++  + LL  ++E +I+   + Y++II  +  +G + +A+    +M+++
Sbjct: 383 ALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQ 442

Query: 583 G-------FEISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
                   + I I  Y K+         +  M  +G   +  + +V++    +G  +   
Sbjct: 443 NIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEA 502

Query: 628 FELAAVMIKSGLLPD 642
            EL   +   GLL D
Sbjct: 503 EELLKDVTSRGLLLD 517


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/661 (24%), Positives = 306/661 (46%), Gaps = 29/661 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNS-----LLYNLRHTDIMWDLYDDIKVSETP 60
           Y R GMV  AV   A M ++   VSI  Y +     LL +    D++ + Y+     E  
Sbjct: 150 YCRNGMVDRAVDTFAWMSKMG--VSISHYAASEMLDLLIDSDRIDVILENYE-----EMC 202

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           + +     V +   ++  ++  + F +    +   P +V  N I+   C      VA   
Sbjct: 203 KGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDF 262

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F +M++ G  P+  +++ LI+  C    ++EA    N M   G+ PD + YSIL  G   
Sbjct: 263 FDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFR 322

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             ++     +    L +G   D+V ++ ++  Y ++G++ + +++   ML +G   NV+ 
Sbjct: 323 AGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVT 382

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS+L++ +C++GR+ EA G+  ++   GL+P ++TYS LI G CK + +     LY  M 
Sbjct: 383 YSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIML 442

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K   P+      ++ GL  + M+ EA  +F   +      +  L+N +IDG  +L    
Sbjct: 443 RKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTR 502

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           + +++Y  +   ++ P +VT+  L+ G  + G++ +A  L   +   G  P  + Y T +
Sbjct: 503 DGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLI 562

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + +C++ +    L + + M++  I P    Y V+I    ++  ++  ++LL ++   G+ 
Sbjct: 563 DGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLE 622

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +TYNT+I  +C  K   KA +L   +     +P + T+ ILID  C +G + +A  +
Sbjct: 623 PDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLI 682

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY--------- 591
             S+ E       + Y+ +I  +    +   A   + +M+      +I  Y         
Sbjct: 683 FSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCK 742

Query: 592 -------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                  + +F C  +     PD     +++  + + G L     L   M+ +G++PD  
Sbjct: 743 KGLMEEASLAFQC-AIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDL 801

Query: 645 L 645
           L
Sbjct: 802 L 802



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 210/508 (41%), Gaps = 81/508 (15%)

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK---- 270
           Q GN+E   +      + G   + + YS LL   C++G +D A+     M  +G+     
Sbjct: 118 QFGNLEVLGEFHGSFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHY 176

Query: 271 --------------------------PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
                                       L  Y  +     K+ +V K +  +  +  + +
Sbjct: 177 AASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGL 236

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P       IL GLC    I  A  +FD ++ S    ++V ++ +I+ Y K   + EA  
Sbjct: 237 VPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFS 296

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           LY  +IEK I P +V ++ LI G  + GK+ +   L       G++   V +++ M+AY 
Sbjct: 297 LYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYV 356

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             G++ + + +   M  + I P  VTY+++I GLC+  ++ EA  +   +   G+ P  +
Sbjct: 357 RVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVL 416

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TY+++I  FCK ++LR  F L   M      P     ++LI+GL   G +  A       
Sbjct: 417 TYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQA 476

Query: 545 QEHNISLTK-----------------------------------VAYTTIIKAHCAEGDV 569
            +  ++L                                     V YT ++K    +G +
Sbjct: 477 VKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRL 536

Query: 570 HKAMTFFCQMVEKGFEIS-------IRDYTK--------SFFCMMLSNGFPPDQEICEVM 614
            +A+  F Q+++KGF          I  + K          F +M SNG  PD  I  V+
Sbjct: 537 DEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVL 596

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +  F + G + +V EL   +IK GL PD
Sbjct: 597 INMFFREGCVENVLELLREIIKYGLEPD 624


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 245/532 (46%), Gaps = 28/532 (5%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +IVI GLCQ  R+ +A+   ++   +   P   S   ++    K G    A+ LF  +L 
Sbjct: 292 NIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLH 351

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G+ P   +Y  LIHGLC+A S ++A E   DM R G  P  +TY+++         +  
Sbjct: 352 SGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEE 411

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL- 245
           A  +I+K++  G  PD+VTY  ++ G C+   VEE L L   M   G   N  +++ ++ 
Sbjct: 412 ACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIIL 471

Query: 246 --------SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
                      C+ G++DEA  LL  M   G  PD+VTYS LI GLC   +V  A  L  
Sbjct: 472 GLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 531

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M  ++  P       ++ GLC+   I EAR   D+++ S    DVV YN ++ G+ + G
Sbjct: 532 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 591

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
               A +L   ++ + ++P++VT+ +L+ G CK  ++ +A  +   +K  G  P+  TYT
Sbjct: 592 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 651

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL---EDM 474
             +  +C  G +   L L  EM    I P HV Y  +   LCK  +   A+++L    + 
Sbjct: 652 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 711

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
                  D++ Y   +    +   +  A   +  M      P       L+ GLC +G  
Sbjct: 712 LRSEAWGDEV-YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQG 770

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
             A  +L  + +       +AY    +         KA  F  +MV KG+EI
Sbjct: 771 GEARAVLEEIMD-------LAYGGKARG--------KAAKFVEEMVGKGYEI 807



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 180/676 (26%), Positives = 289/676 (42%), Gaps = 112/676 (16%)

Query: 69  VIDGLCQQSRLQDA--ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           VI G C   R  +A  I  L E     + P V   N ++    K    E  K +  +M+ 
Sbjct: 16  VIQGWCNVGRTFEAVKIFSLMEECHSPY-PDV--YNVLIDSLSKRQETEAVKKMVQVMVD 72

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD+F++  ++ GLC AG M+EA    ++M    + P   T S LA    L   +  
Sbjct: 73  RGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMER 132

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A+++++ + +  S      Y +++   C+   V++ L+L   M  +   L   +   +L 
Sbjct: 133 AFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLV 188

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +  SGRIDEAL +  E      +P LVT ++L+ G C + +V KA +L   M  +  +P
Sbjct: 189 GLMDSGRIDEALQVYRENRR---EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAP 245

Query: 307 NSFAHGAIL-----------------------------------------LGLCEKEMIT 325
           +  ++  +L                                         LGLC+ + I 
Sbjct: 246 DEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRID 305

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA   F+ +   N   D   Y I+IDG  K G + +A  L+++L+   ++PS V + SLI
Sbjct: 306 EAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLI 365

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
           +G C      DAR L   +   G  PS VTY   ++A C+ G ++    L+++M      
Sbjct: 366 HGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHV 425

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK-------CK- 497
           P  VTY  V+ GLCK  +++EA+ L  +M  +G TP++ ++NTII   C+       C+ 
Sbjct: 426 PDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQR 485

Query: 498 -DLRKAFQLLNQM---------------------------WLHNLE--------PTSATY 521
             L +AF+LL +M                             H LE        PT  T 
Sbjct: 486 GKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQ 545

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N LI GLC  G +K A  +L ++     S   V Y T++  HC  G   +A      MV 
Sbjct: 546 NTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA 605

Query: 582 KGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
           +G   ++  YT                  F  M S+G  P+      +++ F   G +  
Sbjct: 606 RGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDG 665

Query: 627 VFELAAVMIKSGLLPD 642
             +L   M+ +G+ PD
Sbjct: 666 GLKLFGEMVCAGISPD 681



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 206/452 (45%), Gaps = 59/452 (13%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNV 63
           ++ G ++DA  +  K+    +  S   Y SL++ L      D   +L+ D+     P + 
Sbjct: 334 AKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSP 393

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T +++ID  C++  L++A   +++       P VV+ N +M   CK    E A  LF  
Sbjct: 394 VTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNE 453

Query: 124 MLKYGLHPDAFSYNILIHGLCIA---------GSMEEALEFTNDMGRHGVEPDAITYSIL 174
           M + G  P+  S+N +I GLC           G ++EA      M   G  PD +TYS L
Sbjct: 454 MERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 513

Query: 175 AKGF----------HLL-------------------------SQISGAWKVIQKLLIKGS 199
             G           HLL                          +I  A +V+  ++  G 
Sbjct: 514 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 573

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            PD+VTY  L+ G+C+ G  E   +L   M+++G   NV+ Y+ L+S +CK+ R+ EA G
Sbjct: 574 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 633

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           +  +M++ G  P+L TY+ LI G C   +V   ++L+ EM    ISP+   +G +   LC
Sbjct: 634 VFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELC 693

Query: 320 EK-------EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           +        E++ E R    S    + +     Y   +DG ++ G +  A+   R ++  
Sbjct: 694 KSGRSARALEILREGRESLRSEAWGDEV-----YRFAVDGLLEAGKMEMALGFVRDMVRG 748

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
              P+     SL+ G CK+G+  +AR +L+ I
Sbjct: 749 GQLPAPERCASLVAGLCKSGQGGEARAVLEEI 780



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 208/454 (45%), Gaps = 36/454 (7%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P  + +T +I G+C +G   E +K+  +M  +        Y+VL+ S+ K    +    +
Sbjct: 8   PAPLLFTSVIQGWCNVGRTFEAVKIFSLM-EECHSPYPDVYNVLIDSLSKRQETEAVKKM 66

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL-GLC 319
           +  M   G  PD  T++ ++ GLCK  K+ +A  + +EM S+ I P  FA  + L   LC
Sbjct: 67  VQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPP-YFATSSFLAHELC 125

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
            +  +  A    + + ++N       YNI++    K   + +A++L R + EKRI  +  
Sbjct: 126 LRGSMERAFQLLEIMPVAN----SSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAG 181

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           + +S++ G   +G++ +A   L   + +  EP  VT    +  +C  G + +   LL+ M
Sbjct: 182 SLDSVLVGLMDSGRIDEA---LQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAM 238

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT------YNTIIRSF 493
             +   P  V+Y  V+ GLCK  +++EAV+L  D  +   +    +      YN +I   
Sbjct: 239 PDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGL 298

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C+   + +A Q+  +M   N+ P S +Y ILIDGL   G L +A  L   L    ++ + 
Sbjct: 299 CQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPST 358

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
           VAYT++I   C       A +F              D  +  F  M   G PP      V
Sbjct: 359 VAYTSLIHGLCM------ANSF--------------DDARELFADMNRRGCPPSPVTYNV 398

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           M+ A  + G L    +L   MI+ G +PD    N
Sbjct: 399 MIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 432



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 38/178 (21%)

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE----------DMYVI----------- 477
           M  + I P  + +T VI+G C   +  EAV++            D+Y +           
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQET 60

Query: 478 -------------GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
                        G  PD  T+ TI+   CK   + +A  ++++M    + P  AT + L
Sbjct: 61  EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
              LC+ G ++ A  LL  +   N S    AY  ++ A C    V  A+     M EK
Sbjct: 121 AHELCLRGSMERAFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSEK 174


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/507 (28%), Positives = 258/507 (50%), Gaps = 7/507 (1%)

Query: 61  RNVYTNSIVIDGLCQQS-RLQDAILFLQE---TAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           R+  + +IV+  LC++   L+ A+  L +    A     P+ VS   +M   C     + 
Sbjct: 74  RDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDE 133

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  L   M   G+  D  +Y  LI GLC A  ++ ALE   +M   GV P+ I YS L +
Sbjct: 134 AVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLR 193

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+    +     KV +++   G +PD++ +T  I   C+ G + + +K++++M+ +G + 
Sbjct: 194 GYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEP 253

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NV+ Y+VL++ +CK G + EAL L  EM+  G+ PD+VTY+ LI GL    ++  A+ L 
Sbjct: 254 NVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLL 313

Query: 297 NEMCSKR--ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
            EM      + P+     +++ GLC+   + +A    + +    C+ ++V YN +I G++
Sbjct: 314 EEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFL 373

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           ++  +  A+ L  +LI   + P   T++ LI GF K  +V  A   L T+   G+     
Sbjct: 374 RVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELF 433

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            Y   + A C+ G +++ + L  EM+    G   V Y+ ++ G CK   ++ A QLL+DM
Sbjct: 434 HYIPLLAALCQLGMMEQAMVLFNEMDMNC-GLDAVAYSTMMYGACKSGDIKAAKQLLQDM 492

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+ PD +TY+ +I  F K  DL +A ++L QM      P  A ++ LI G    G +
Sbjct: 493 LDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQI 552

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIK 561
                L+  ++  N+++      T+++
Sbjct: 553 NKILDLIHEMRAKNVAIDPKFICTLVR 579



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 259/509 (50%), Gaps = 14/509 (2%)

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLM-----LKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           VS N +++  C+ G  ++ + L  L            P+A SY +++ GLC +   +EA+
Sbjct: 77  VSYNIVLAALCRRG-GDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAV 135

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
                M   GV  D +TY  L +G    +++ GA +++ ++   G  P+++ Y+ L+ GY
Sbjct: 136 ALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGY 195

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+ G  ++  K+ E M   G + +VI ++  +  +CK GRI +A+ +   M   GL+P++
Sbjct: 196 CRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNV 255

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VTY++LI  LCK+  V +A+ L NEM  K ++P+   +  ++ GL     +  A    + 
Sbjct: 256 VTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEE 315

Query: 334 LIMSNCI--QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           +I  + +   DVV +N +I G  K+G + +A+ +   + E+    ++VT+N LI GF + 
Sbjct: 316 MIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRV 375

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
            KV  A  L+  +   GLEP + TY+  +N + +   + R    L+ M  + I      Y
Sbjct: 376 HKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHY 435

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             ++  LC+   +++A+ L  +M  +    D + Y+T++   CK  D++ A QLL  M  
Sbjct: 436 IPLLAALCQLGMMEQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLD 494

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             L P + TY+ILI+     GDL+ A+ +L  +           + ++IK + AEG ++K
Sbjct: 495 EGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINK 554

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMML 600
            +    +M  K   I  +     F C ++
Sbjct: 555 ILDLIHEMRAKNVAIDPK-----FICTLV 578



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 243/507 (47%), Gaps = 28/507 (5%)

Query: 164 VEPDAITYSIL-----AKGFHLLSQISGAWKVIQKLLIKGSDPDI---VTYTVLICGYCQ 215
           V P A   ++L     A    LL++   A  V +   +  + PD+   V+Y +++   C+
Sbjct: 29  VRPAAPFLAVLLRRGRADAAALLNRRLRAAPVTEACSLLSALPDVRDAVSYNIVLAALCR 88

Query: 216 IG-NVEEGLKLREVMLSQGF---KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
            G ++ + L L   M  +     + N ++Y++++  +C S R DEA+ LL  M+A G++ 
Sbjct: 89  RGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRA 148

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D+VTY  LIRGLC   ++  A++L  EMC   + PN   +  +L G C      +    F
Sbjct: 149 DVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVF 208

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           + +       DV+++   ID   K G IG+AV++   ++++ + P++VT+N LI   CK 
Sbjct: 209 EEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKE 268

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM--ETKAIGPTHV 449
           G V +A  L + +   G+ P  VTY T +        +   + LL+EM      + P  V
Sbjct: 269 GSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVV 328

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           T+  VI GLCK  ++++A+ + E M   G   + +TYN +I  F +   +  A  L++++
Sbjct: 329 TFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSEL 388

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               LEP S TY+ILI+G     ++  A+  L ++ +  I      Y  ++ A C  G +
Sbjct: 389 ISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMM 448

Query: 570 HKAMTFFCQM-VEKGFEI---SIRDY----------TKSFFCMMLSNGFPPDQEICEVML 615
            +AM  F +M +  G +    S   Y           K     ML  G  PD     +++
Sbjct: 449 EQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILI 508

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPD 642
             F + GDL     +   M  SG +PD
Sbjct: 509 NMFAKLGDLEEAERVLKQMAASGFVPD 535



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 240/499 (48%), Gaps = 48/499 (9%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKE---LDLKVSIQTYNSLLYNL---RHTDIMWDLYDDI 54
           +LA +  R G +  A+ ++A M        + +  +Y  ++  L   R TD    L   +
Sbjct: 82  VLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSM 141

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           + S    +V T   +I GLC  + L  A+  L E  G    P+V+  + ++  YC+ G  
Sbjct: 142 QASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRW 201

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           +    +F  M + G+ PD   +   I  LC  G + +A++  + M + G+EP+ +TY++L
Sbjct: 202 QDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVL 261

Query: 175 AK-----------------------------------GFHLLSQISGAWKVIQKLLIKGS 199
                                                G   + ++ GA  ++++ +I+G 
Sbjct: 262 INCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEE-MIQGD 320

Query: 200 ---DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
              +PD+VT+  +I G C+IG + + + +RE+M  +G   N++ Y+ L+    +  +++ 
Sbjct: 321 TLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNM 380

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+ L+ E+ + GL+PD  TYSILI G  K  +V +A      M  + I    F +  +L 
Sbjct: 381 AMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLA 440

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
            LC+  M+ +A + F+ + M NC  D V Y+ M+ G  K G+I  A QL + ++++ ++P
Sbjct: 441 ALCQLGMMEQAMVLFNEMDM-NCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAP 499

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
             VT++ LI  F K G + +A R+L  +   G  P    + + +  Y  EG I ++L L+
Sbjct: 500 DAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLI 559

Query: 437 QEMETK--AIGPTHVTYTV 453
            EM  K  AI P  +   V
Sbjct: 560 HEMRAKNVAIDPKFICTLV 578


>gi|147790305|emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 176/622 (28%), Positives = 290/622 (46%), Gaps = 30/622 (4%)

Query: 30  SIQTYNSLLYNL-----RHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQD 81
           S+  YN+LLY+      RH    D +  +Y  +K      N  T +I++DG+     L+ 
Sbjct: 77  SVNDYNALLYHYLKSSSRHLIVLDELVQVYFGMKRLGPYPNASTFNILLDGMTSTGNLRA 136

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           A  F +E     F PS  SL  I+ ++  LG    +  +F  ML+    P   + N+LI 
Sbjct: 137 AFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTLNLLIS 196

Query: 142 GLCIAGSMEEA-LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
            L  AG   EA   F   +G+ G    A +Y+ +        Q   A  ++  L   G+ 
Sbjct: 197 MLSKAGMAREAHFVFRVLLGK-GCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAV 255

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
            +  +YT L+ G+ + G  EE   + + M   G K NVI Y+V++  +C  GRI +AL +
Sbjct: 256 HNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDI 315

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L +M   G  PD+VTY++++R L  QD+  +  +L   +  K ISP+SF + A+  GL +
Sbjct: 316 LGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLLK 375

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
           +  +  A      +I + C  DV +YNI      +    GEA+ L + ++EK + P+ V+
Sbjct: 376 RGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVS 435

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +N+++ GFC+   + +A +L D  +     P  V++ T ++A C++GN   +  +L  ME
Sbjct: 436 YNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRME 495

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            + +    V+ T +I+  C   K+ E ++LLE M   G+ P  +T+N ++   CK   L 
Sbjct: 496 YEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLG 555

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
            A ++  +       P + +YNILI      G+    + LL  +    +    V Y + I
Sbjct: 556 TAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFI 615

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
           K  C EG +  A             I +RD        ML +G  P   I   +L A  Q
Sbjct: 616 KGLCKEGKISVA-------------IQLRD-------QMLESGLTPTVTIYNTILAAMFQ 655

Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
            G    +  L   M   G  P+
Sbjct: 656 RGKFWDIVSLLKDMTMDGCEPN 677



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/494 (24%), Positives = 216/494 (43%), Gaps = 56/494 (11%)

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY---GLH 130
           C QS    A+L+  +  G     +  S  A++  + K G  E A   FC++ +    G  
Sbjct: 236 CGQSYTALALLYSLKKMGAVH--NAASYTALVYGFSKEGLWEEA---FCMLDEMKIDGCK 290

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  +Y +++  LC  G + +AL+    MG+ G +PD +TY+++ +      +     ++
Sbjct: 291 PNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGEL 350

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           +Q +  K   PD  TY  L  G  + G V    KL   ++S G  ++V  Y++    +C+
Sbjct: 351 LQVIDQKEISPDSFTYAALTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCR 410

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             +  EAL LL  M   GL P  V+Y+ ++ G C+++ + +A+QL++       SP+  +
Sbjct: 411 ENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVS 470

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
              IL   C++   +  R     +       +VV    +I  +  +G I E ++L   +I
Sbjct: 471 FNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMI 530

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG---------------------- 408
              ++P++VTFN L+   CKNG +  A R+    +  G                      
Sbjct: 531 RNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDS 590

Query: 409 -------------LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
                        L+P AVTY +F+   C+EG I   + L  +M    + PT   Y  ++
Sbjct: 591 LVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTVTIYNTIL 650

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             + ++ K  + V LL+DM + G  P+ ++   + ++  KC             W+    
Sbjct: 651 AAMFQRGKFWDIVSLLKDMTMDGCEPNAVSIEILKQAMSKC-------------WMKRFP 697

Query: 516 PTSATYNILIDGLC 529
             S     +I G C
Sbjct: 698 EVSKQLEFVICGNC 711


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 263/520 (50%), Gaps = 1/520 (0%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + VI    +Q    +A+    E        +V+   ++M  YC LG   +A  LF  +
Sbjct: 292 TYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEV 351

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G+ PD   +++LI+G    G ME+A E    M   G++P+    + L +GFH  + +
Sbjct: 352 VEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLL 411

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A+ +  + +  G   ++VTY +L+    ++G V E   L E M+S+G   ++++Y+ L
Sbjct: 412 EHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNL 470

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   CK G +D+A  +L  +   GLKP+ VTY++LI G  K+    +A  ++ +M +  I
Sbjct: 471 ILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANI 530

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +P       ++ GL +   ++E +   ++ I    +   + YN +IDG+ K G +  A+ 
Sbjct: 531 APTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALL 590

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
            YR++ E  ISP ++T+ SLI G CK+ K+  A  +   +K  G++   V Y+  ++ +C
Sbjct: 591 AYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFC 650

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +  +++       E+    + P  V Y  +I G      ++ A+ L ++M    V  D  
Sbjct: 651 KMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQ 710

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y +II    K   L  A  L ++M   ++ P    Y +LI+GL  NG L+NA  +L  +
Sbjct: 711 VYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEM 770

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             +NI+ + + Y  +I  +  EG++ +A     +M++KG 
Sbjct: 771 DGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGL 810



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 167/655 (25%), Positives = 312/655 (47%), Gaps = 19/655 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           + R   + DAV     M E DL   +   N+LL  +   +++ D   LYD++       +
Sbjct: 160 FVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGD 219

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            YT  +V+    ++ + ++   F +E  G+       + + ++   C+     +A  L  
Sbjct: 220 CYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLK 279

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M ++G  P   +Y  +I      G+  EAL   ++M   G+  + I    L KG+ +L 
Sbjct: 280 EMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLG 339

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            ++ A ++  +++  G  PD+V ++VLI G  ++G++E+  +L   M   G + NV   +
Sbjct: 340 DVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVN 399

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            LL    +   ++ A GL  E    G+  ++VTY+IL++ L +  KV++A  L+ +M SK
Sbjct: 400 SLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSK 458

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I+P+  ++  ++LG C+K  + +A     S++      + V Y ++IDG+ K G+   A
Sbjct: 459 GITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERA 518

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             ++ Q++   I+P+  TFN++I G  K G+V++ +  L+     G   +++TY + ++ 
Sbjct: 519 FVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDG 578

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           + +EG +   L   +EM    I P  +TYT +I GLCK  K+  A+++  DM   G+  D
Sbjct: 579 FFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLD 638

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            + Y+ +I  FCK  D+  A +   ++    L P +  YN +I G     +++ A  L  
Sbjct: 639 VVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQ 698

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------- 592
            + ++ +      YT+II     EG +  A+  + +M+ K     I  YT          
Sbjct: 699 EMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNG 758

Query: 593 -----KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                      M  N   P   +  +++    + G+L   F L   M+  GL+PD
Sbjct: 759 QLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPD 813



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 230/449 (51%), Gaps = 3/449 (0%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG-PSVVSLNAIMS 106
           ++LY  +K+     NV+  + +++G  +Q+ L+ A     E    E G  +VV+ N ++ 
Sbjct: 380 YELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAV--EHGITNVVTYNILLK 437

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
              +LG    A  L+  M+  G+ P   SYN LI G C  G M++A      +   G++P
Sbjct: 438 WLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKP 497

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           +A+TY++L  GF        A+ V ++++     P   T+  +I G  + G V E     
Sbjct: 498 NAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKL 557

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
              + QGF    I Y+ ++    K G +D AL    EM   G+ PD++TY+ LI GLCK 
Sbjct: 558 NNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKS 617

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
           +K+  A++++++M  K +  +  A+ A++ G C+   +  A  +F  L+      + V+Y
Sbjct: 618 NKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVY 677

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N MI G++ L N+  A+ L++++I+ ++   +  + S+I G  K GK++ A  L   +  
Sbjct: 678 NSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLS 737

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
             + P  V YT  +N     G ++    +L+EM+   I P+ + Y ++I G  ++  LQE
Sbjct: 738 KDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQE 797

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           A +L ++M   G+ PD  TY+ ++    K
Sbjct: 798 AFRLHDEMLDKGLVPDDTTYDILVNGKLK 826



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 152/624 (24%), Positives = 273/624 (43%), Gaps = 86/624 (13%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++    + +++ DA+   +     +  P V  +N +++   +      A+ L+  M++ G
Sbjct: 156 LLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERG 215

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           ++ D ++ ++++      G  EE  +F  +    G+E DA  YSIL +       ++ A 
Sbjct: 216 IYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLAC 275

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++++++   G  P   TYT +I                                    + 
Sbjct: 276 ELLKEMREFGWVPSKGTYTAVIV-----------------------------------AC 300

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM--------- 299
            K G   EAL L  EM +VGL  +++    L++G C    V+ A+QL++E+         
Sbjct: 301 VKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDV 360

Query: 300 ---------CSK-----------------RISPNSFAHGAILLGLCEKEMITEARMYFDS 333
                    CSK                  I PN F   ++L G  E+ ++  A   FD 
Sbjct: 361 VIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDE 420

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
            +  + I +VV YNI++    +LG + EA  L+ +++ K I+PS+V++N+LI G CK G 
Sbjct: 421 AV-EHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGC 479

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           +  A  +L +I   GL+P+AVTYT  ++ + ++G+ +R   + ++M    I PT  T+  
Sbjct: 480 MDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNT 539

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           VI GL K  ++ E    L +    G     ITYN+II  F K   +  A     +M    
Sbjct: 540 VINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESG 599

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           + P   TY  LIDGLC +  +  A  +   ++   + L  VAY+ +I   C   D+  A 
Sbjct: 600 ISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESAS 659

Query: 574 TFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAF 618
            FF ++++ G   +   Y                 +    M+ N  P D ++   ++   
Sbjct: 660 KFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGL 719

Query: 619 HQGGDLGSVFELAAVMIKSGLLPD 642
            + G L    +L + M+   ++PD
Sbjct: 720 LKEGKLSLALDLYSEMLSKDIVPD 743



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 204/425 (48%), Gaps = 1/425 (0%)

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
           GR+G E D+  ++ L K F  +++I+ A +  + +L     P +     L+    +   V
Sbjct: 142 GRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMV 201

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            +  +L + M+ +G   +     V++ +  K G+ +E      E +  GL+ D   YSIL
Sbjct: 202 CDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSIL 261

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           ++ +C++  ++ A +L  EM      P+   + A+++   ++    EA    D ++    
Sbjct: 262 VQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGL 321

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             +V++   ++ GY  LG++  A+QL+ +++E  + P +V F+ LI G  K G +  A  
Sbjct: 322 PMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYE 381

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L   +KL G++P+     + +  + E+  ++    L  E     I    VTY +++K L 
Sbjct: 382 LYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNV-VTYNILLKWLG 440

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           +  K+ EA  L E M   G+TP  ++YN +I   CK   + KA+ +L  +    L+P + 
Sbjct: 441 ELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAV 500

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TY +LIDG    GD + A  +   +   NI+ T   + T+I      G V +        
Sbjct: 501 TYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNF 560

Query: 580 VEKGF 584
           +++GF
Sbjct: 561 IKQGF 565



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 181/388 (46%), Gaps = 38/388 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           + + G +  A  ++  + E  LK +  TY  L+   +    ++  + +++ +  +     
Sbjct: 474 HCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPT 533

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T + VI+GL +  R+ +    L     + F  + ++ N+I+  + K G  + A   + 
Sbjct: 534 DHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYR 593

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + G+ PD  +Y  LI GLC +  +  ALE  +DM   G++ D + YS L  GF  + 
Sbjct: 594 EMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMH 653

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A K   +LL  G  P+ V Y  +I G+  + N+E  L L + M+      ++  Y+
Sbjct: 654 DMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYT 713

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++  + K G++  AL L  EM +  + PD+V Y++LI GL    ++  A ++  EM   
Sbjct: 714 SIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGN 773

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I+P+                                   V++YNI+I G  + GN+ EA
Sbjct: 774 NITPS-----------------------------------VLVYNILIAGNFREGNLQEA 798

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            +L+ ++++K + P   T++ L+ G  K
Sbjct: 799 FRLHDEMLDKGLVPDDTTYDILVNGKLK 826



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 117/248 (47%)

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            D  ++N ++  +V++  I +AV+ +R ++E  + P +   N+L+    +   V DAR+L
Sbjct: 148 SDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQL 207

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            D +   G+     T    M A  +EG  + +    +E + + +      Y+++++ +C+
Sbjct: 208 YDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCR 267

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
           +  L  A +LL++M   G  P + TY  +I +  K  +  +A +L ++M    L      
Sbjct: 268 RLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIV 327

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
              L+ G CV GD+  A  L   + E  +    V ++ +I      GD+ KA   + +M 
Sbjct: 328 TRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMK 387

Query: 581 EKGFEISI 588
             G + ++
Sbjct: 388 LMGIQPNV 395



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 38/255 (14%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPRN 62
           + + G V  A+    +M E  +   + TY SL+  L  ++   +  +++ D+K      +
Sbjct: 579 FFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLD 638

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL-- 120
           V   S +IDG C+   ++ A  F  E       P+ V  N+++S +  L   E A  L  
Sbjct: 639 VVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQ 698

Query: 121 ---------------------------------FCLMLKYGLHPDAFSYNILIHGLCIAG 147
                                            +  ML   + PD   Y +LI+GL   G
Sbjct: 699 EMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNG 758

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            +E A +   +M  + + P  + Y+IL  G      +  A+++  ++L KG  PD  TY 
Sbjct: 759 QLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYD 818

Query: 208 VLICGYCQIGNVEEG 222
           +L+ G  ++ +   G
Sbjct: 819 ILVNGKLKVSHTLGG 833



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 111/263 (42%), Gaps = 15/263 (5%)

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           LL+    +G E  +  +   + ++     I   +   + M    + P       ++  + 
Sbjct: 137 LLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMV 196

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           ++  + +A QL ++M   G+  D  T + ++R+  K     +  +   +     LE  +A
Sbjct: 197 RRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAA 256

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            Y+IL+  +C   DL  A  LL  ++E     +K  YT +I A   +G+  +A+    +M
Sbjct: 257 AYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEM 316

Query: 580 VEKGFEISI---RDYTKSF------------FCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
           V  G  +++   R   K +            F  ++  G  PD  I  V++    + GD+
Sbjct: 317 VSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDM 376

Query: 625 GSVFELAAVMIKSGLLPDKFLIN 647
              +EL   M   G+ P+ F++N
Sbjct: 377 EKAYELYTRMKLMGIQPNVFIVN 399


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 269/529 (50%), Gaps = 2/529 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V   + VIDG  ++  +  A    +E   +   P  V+ ++++   CK    + A+   
Sbjct: 218 DVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFL 277

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G+ P+ ++YN LI+G    G  +EA+    +M R  + PD +T+++L       
Sbjct: 278 RQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKY 337

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  V   + +KG +PD+ +Y +++ GY   G + +   L ++ML  G    +  +
Sbjct: 338 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTF 397

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+ +    G +D+A+ +  EM   G+KP+++TY+ +I  LC+  K+  A++ +N+M  
Sbjct: 398 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMID 457

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIG 360
           + ++P+ +A+  ++ G C    + +A+    S IM+N +  D+VL++ +I+   KLG + 
Sbjct: 458 QGVAPDKYAYHCLIQGFCTHGSLLKAKELI-SEIMNNGMHLDIVLFSSIINNLCKLGRVM 516

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  ++   +   + P+ V ++ L+ G+C  GK+  A R+ D +   G+EP+ V Y T +
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YC+ G I   L+L +EM  K I P+ + Y ++I GL +  +   A     +M   G+ 
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            ++ TY+ ++R   K +   +A  L  ++   N++    T N +I G+     ++ A  L
Sbjct: 637 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 696

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             S+    +    V Y+ +I     EG V +A   F  M   G E   R
Sbjct: 697 FASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 745



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 153/576 (26%), Positives = 269/576 (46%), Gaps = 14/576 (2%)

Query: 27  LKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR-----NVYTNSIVIDGLCQQSR 78
           L+V I   N LL      + TD   D    I +  TP      +V++ SI++  LC Q +
Sbjct: 142 LRVDIIIANHLLKGFCEAKRTDEALD----ILLHRTPELGCVPDVFSYSILLKSLCDQGK 197

Query: 79  --LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSY 136
               D +L +    G    P VV+ N ++  + K G    A  LF  M++ G+ PD  +Y
Sbjct: 198 SGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTY 257

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           + ++H LC A +M++A  F   M   GV P+  TY+ L  G+    Q   A +V +++  
Sbjct: 258 SSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           +   PD+VT+ +L+   C+ G ++E   + + M  +G   +V +Y+++L+     G + +
Sbjct: 318 QSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD 377

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
              L   M   G+ P + T+++LI+       + KA+ ++NEM    + PN   +  ++ 
Sbjct: 378 MTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIA 437

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
            LC    + +A   F+ +I      D   Y+ +I G+   G++ +A +L  +++   +  
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHL 497

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            IV F+S+I   CK G+V DA+ + D     GL P+AV Y+  M+ YC  G +++ L + 
Sbjct: 498 DIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF 557

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
             M +  I P  V Y  ++ G CK  ++ E + L  +M   G+ P  I YN II    + 
Sbjct: 558 DAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 617

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
                A    ++M    +     TY+I++ GL  N     A  L   L+  N+ +  +  
Sbjct: 618 GRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITL 677

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            T+I        V +A   F  +   G    +  Y+
Sbjct: 678 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYS 713



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 259/518 (50%), Gaps = 16/518 (3%)

Query: 82  AILFLQETAGKEFGPSVVSLN----AIMSRYC-KLGFAEVAKGLFCLMLKYGLHPDAFSY 136
           A+      A +  GP V+S      AI+   C +    E+A   F  +L+ GL  D    
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIA 149

Query: 137 NILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           N L+ G C A   +EAL+   +     G  PD  +YSIL K      + SG    + +++
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGK-SGQADDLLRMM 208

Query: 196 IKGS---DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
            +G     PD+V Y  +I G+ + G+V +   L + M+ +G   + + YS ++ ++CK+ 
Sbjct: 209 AEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKAR 268

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            +D+A   L +M   G+ P+  TY+ LI G     +  +A++++ EM  + I P+     
Sbjct: 269 AMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFN 328

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC+   I EAR  FD++ M     DV  YNIM++GY   G + +   L+  ++  
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 388

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            I+P I TFN LI  +   G +  A  + + ++ HG++P+ +TYTT + A C  G +   
Sbjct: 389 GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDA 448

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           +    +M  + + P    Y  +I+G C    L +A +L+ ++   G+  D + +++II +
Sbjct: 449 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINN 508

Query: 493 FCK---CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
            CK     D +  F L   + LH   PT+  Y++L+DG C+ G ++ A  +  ++    I
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLH---PTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
               V Y T++  +C  G + + ++ F +M++KG + S
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 603



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 136/584 (23%), Positives = 269/584 (46%), Gaps = 38/584 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + + G V+ A  +  +M +  +     TY+S+++ L   R  D        +       N
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T + +I G     + ++A+   +E   +   P VV+ N +M   CK G  + A+ +F 
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G +PD FSYNI+++G    G + +  +  + M   G+ P   T+++L K +    
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 408

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A  +  ++   G  P+++TYT +I   C+IG +++ ++    M+ QG   +  AY 
Sbjct: 409 MLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C  G + +A  L+ E+   G+  D+V +S +I  LCK  +V  A  +++   + 
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P +  +  ++ G C    + +A   FD+++ +    + V+Y  +++GY K+G I E 
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + L+R++++K I PS + +N +I G  + G+   A+     +K H               
Sbjct: 589 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK-----VKFH--------------- 628

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
                          EM    I     TY++V++GL K     EA+ L +++  + V  D
Sbjct: 629 ---------------EMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 673

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            IT NT+I    + + + +A  L   +    L P   TY+I+I  L   G ++ A+ +  
Sbjct: 674 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFS 733

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           S+Q             +++    + ++ +A  +  ++ E+ F +
Sbjct: 734 SMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSL 777



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 229/469 (48%), Gaps = 3/469 (0%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSE 58
           L + YS TG   +AV V  +M+   +   + T+N L+ +L ++  I    D++D + +  
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKG 354

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +V++ +I+++G   +  L D         G    P + + N ++  Y   G  + A 
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM 414

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M  +G+ P+  +Y  +I  LC  G M++A+E  N M   GV PD   Y  L +GF
Sbjct: 415 IIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 474

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +  A ++I +++  G   DIV ++ +I   C++G V +   + ++ ++ G     
Sbjct: 475 CTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTA 534

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + YS+L+   C  G++++AL +   M + G++P+ V Y  L+ G CK  ++ + + L+ E
Sbjct: 535 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFRE 594

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  K I P++  +  I+ GL E      A++ F  +  S    +   Y+I++ G  K   
Sbjct: 595 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 654

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             EA+ L+++L    +   I+T N++I G  +  +V +A+ L  +I   GL P  VTY+ 
Sbjct: 655 FDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSI 714

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
            +    +EG ++    +   M+     P       V++ L K+ ++  A
Sbjct: 715 MITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 188/402 (46%), Gaps = 7/402 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETP 60
            Y+  GM+  A+ +  +M++  +K ++ TY +++  L    +  D M      I     P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            + Y    +I G C    L  A   + E         +V  ++I++  CKLG    A+ +
Sbjct: 463 -DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNI 521

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F L +  GLHP A  Y++L+ G C+ G ME+AL   + M   G+EP+ + Y  L  G+  
Sbjct: 522 FDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCK 581

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG-NVEEGLKLREVMLSQGFKLNVI 239
           + +I     + +++L KG  P  + Y ++I G  + G  V   +K  E M   G  +N  
Sbjct: 582 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE-MTESGIAMNKC 640

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            YS++L  + K+   DEA+ L  E+ A+ +K D++T + +I G+ +  +V +A  L+  +
Sbjct: 641 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 700

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               + P    +  ++  L ++ ++ EA   F S+  + C  D  L N ++   +K   I
Sbjct: 701 SRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 760

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
             A     ++ E+  S   +T   L+  F   G   +  R L
Sbjct: 761 VRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 102/254 (40%), Gaps = 32/254 (12%)

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGP-----THVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           +A C  G     +AL     ++A GP     T  TY +++    +  + + A+     + 
Sbjct: 80  SAACRSGP-ALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLL 138

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE-----PTSATYNILIDGLCV 530
             G+  D I  N +++ FC+ K   +A  +L    LH        P   +Y+IL+  LC 
Sbjct: 139 RTGLRVDIIIANHLLKGFCEAKRTDEALDIL----LHRTPELGCVPDVFSYSILLKSLCD 194

Query: 531 NGDLKNADCLLVSLQEHNI--SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
            G    AD LL  + E     S   VAY T+I     EGDV+KA   F +MV++G     
Sbjct: 195 QGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDF 254

Query: 589 RDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             Y+               ++F   M++ G  P+      ++  +   G       +   
Sbjct: 255 VTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 314

Query: 634 MIKSGLLPDKFLIN 647
           M +  +LPD    N
Sbjct: 315 MRRQSILPDVVTFN 328


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 158/603 (26%), Positives = 268/603 (44%), Gaps = 56/603 (9%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH------------------------ 130
            P++ + + ++ R+C++G  E     F L+LK G                          
Sbjct: 87  APNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMD 146

Query: 131 ------------PDAFSYNILIHGLCIAGSMEEALEF----TNDMGRHGVEPDAITYSIL 174
                       PD  SY IL+ GLC     EEALE      +D GR    P+ ++YSI+
Sbjct: 147 VLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRR-CPPNVVSYSIV 205

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             GF    Q+   + +  +++ +G  PD+VTYT +I G C+    +    + + M+  GF
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGF 265

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           K N   Y+ L+      G+  E + +L EM A GLKPD  TY  L+  LCK  +  +A  
Sbjct: 266 KPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARF 325

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
            ++ M  K I P    +G ++ G   K  ++E   + D ++ +    D  ++NI    Y 
Sbjct: 326 FFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYA 385

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K G I +A+ ++ ++ +  +SP++V + +LI   CK G+V DA    + +   G+ P+ V
Sbjct: 386 KCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIV 445

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            + + +   C     +R   L+ EM  + I P  V +  +I  LC   ++ E  +L++ M
Sbjct: 446 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM 505

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
             +GV PD  +Y  +I  +C      +A ++ + M    L PT  TYN L+ G C    +
Sbjct: 506 EHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRI 565

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
            +A CL   +    ++   V Y TI+          +A   +  M+  G +  I  Y   
Sbjct: 566 DDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNII 625

Query: 595 FFCMMLSN----GFPPDQEICE-----------VMLIAFHQGGDLGSVFELAAVMIKSGL 639
              +  SN     F   Q +C            +M+ A  +GG      +L A +  +GL
Sbjct: 626 LNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGL 685

Query: 640 LPD 642
           +P+
Sbjct: 686 VPN 688



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 167/643 (25%), Positives = 278/643 (43%), Gaps = 60/643 (9%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC---KLGFAEVAK 118
           N+ T SI+I   C+   L+             +    +++N ++   C   ++G  E   
Sbjct: 89  NLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVG--EAMD 146

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF----TNDMGRHGVEPDAITYSIL 174
            L   M + G  PD  SY IL+ GLC     EEALE      +D GR    P+ ++YSI+
Sbjct: 147 VLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRR-CPPNVVSYSIV 205

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             GF    Q+   + +  +++ +G  PD+VTYT +I G C+    +    + + M+  GF
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGF 265

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           K N   Y+ L+      G+  E + +L EM A GLKPD  TY  L+  LCK  +  +A  
Sbjct: 266 KPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARF 325

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD------------ 342
            ++ M  K I P    +G ++ G   K  ++E   + D ++ +    D            
Sbjct: 326 FFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYA 385

Query: 343 -----------------------VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
                                  VV Y  +ID   KLG + +A   + Q+I + ++P+IV
Sbjct: 386 KCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIV 445

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
            FNSL+YG C   K   A  L+  +   G+ P+AV + T +   C  G +     L+  M
Sbjct: 446 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM 505

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
           E   + P   +YT +I G C   +  EA ++ + M  IG++P ++TYNT++  +C    +
Sbjct: 506 EHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRI 565

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
             A+ L  +M    + P   TYN ++ GL        A  L +++           Y  I
Sbjct: 566 DDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNII 625

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGF 604
           +   C    V +A   F  +  KG +++I  +T                  F  + +NG 
Sbjct: 626 LNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGL 685

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            P+     ++     + G L     L + M K+G  P+  ++N
Sbjct: 686 VPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLN 728



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 242/524 (46%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P NV + SIVI+G   + ++        E   +   P VV+   ++   CK    + A+G
Sbjct: 196 PPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEG 255

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F  M+  G  P+ ++YN LIHG    G  +E ++   +M   G++PD  TY  L     
Sbjct: 256 VFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLC 315

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +   A      ++ KG  P + TY +LI GY   G + E     ++M+  G   +  
Sbjct: 316 KNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHH 375

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            +++  S+  K G ID+A+ +  +M   GL P++V Y  LI  LCK  +V  A   +N+M
Sbjct: 376 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 435

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            ++ ++PN     +++ GLC  +    A      ++      + V +N +I     +G +
Sbjct: 436 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 495

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            E  +L   +    + P   ++  LI G+C  G+  +A ++ D +   GL P+ VTY T 
Sbjct: 496 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTL 555

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ YC    I     L +EM  K + P  VTY  ++ GL +  +  EA +L  +M   G 
Sbjct: 556 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 615

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             D  TYN I+   CK   + +AF++   +    L+    T+ I+I  L   G  ++A  
Sbjct: 616 KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 675

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L  ++  + +    V Y  + +    EG + +  + F  M + G
Sbjct: 676 LFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNG 719



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/544 (25%), Positives = 248/544 (45%)

Query: 43  HTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLN 102
             D  ++L+ ++     P +V T + VIDGLC+      A    Q+     F P+  + N
Sbjct: 214 QVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYN 273

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
            ++  Y  +G  +    +   M   GL PD ++Y  L++ LC  G   EA  F + M R 
Sbjct: 274 CLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRK 333

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G++P   TY IL  G+     +S     +  ++  G  PD   + +    Y + G +++ 
Sbjct: 334 GIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKA 393

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           + +   M   G   NV+ Y  L+ ++CK GR+D+A     +M   G+ P++V ++ L+ G
Sbjct: 394 MDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYG 453

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           LC  DK  +A +L  EM  + I PN+     ++  LC    + E R   D +       D
Sbjct: 454 LCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPD 513

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
              Y  +I GY   G   EA +++  ++   +SP+ VT+N+L++G+C   ++ DA  L  
Sbjct: 514 AFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFR 573

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G+ P  VTY T ++   +         L   M          TY +++ GLCK  
Sbjct: 574 EMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSN 633

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            + EA ++ + +   G+  + IT+  +I +  K      A  L   +  + L P   TY 
Sbjct: 634 CVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYR 693

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           ++ + L   G L+  D L  +++++  +        +++     GD+ +A  +  ++ E+
Sbjct: 694 LVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDER 753

Query: 583 GFEI 586
            F +
Sbjct: 754 NFSV 757



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/514 (23%), Positives = 243/514 (47%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N YT + +I G     + ++ +  L+E + +   P   +  ++++  CK G    A+  F
Sbjct: 268 NNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFF 327

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M++ G+ P   +Y ILIHG    G++ E   F + M  +G+ PD   ++I    +   
Sbjct: 328 DSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKC 387

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             I  A  +  K+   G  P++V Y  LI   C++G V++       M+++G   N++ +
Sbjct: 388 GMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVF 447

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+  +C   + + A  L+YEM   G+ P+ V ++ LI  LC   +V +  +L + M  
Sbjct: 448 NSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEH 507

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             + P++F++  ++ G C      EA   FD ++        V YN ++ GY     I +
Sbjct: 508 VGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDD 567

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+R+++ K ++P +VT+N++++G  +  + ++A+ L   +   G +    TY   +N
Sbjct: 568 AYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILN 627

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+   +     + Q + +K +    +T+T++I  L K  + ++A+ L   +   G+ P
Sbjct: 628 GLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVP 687

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           + +TY  +  +  +   L +   L + M  +   P S   N L+  L   GD+  A   L
Sbjct: 688 NVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYL 747

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
             L E N S+     + ++    ++   H A + 
Sbjct: 748 SKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 236/513 (46%), Gaps = 11/513 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL----YNLRHTDIMWDLYDDIKVSETPR 61
           Y   G   + V ++ +M    LK    TY SLL     N R  +  +     I+    P+
Sbjct: 279 YLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPK 338

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V T  I+I G   +  L +   FL         P     N   S Y K G  + A  +F
Sbjct: 339 -VSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIF 397

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M ++GL P+  +Y  LI  LC  G +++A    N M   GV P+ + ++ L  G   +
Sbjct: 398 NKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTV 457

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A +++ ++L +G  P+ V +  LIC  C +G V EG +L ++M   G + +  +Y
Sbjct: 458 DKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSY 517

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+S  C +GR DEA  +   M ++GL P  VTY+ L+ G C   ++  A  L+ EM  
Sbjct: 518 TPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLR 577

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K ++P    +  IL GL + +  +EA+  + ++I S    D+  YNI+++G  K   + E
Sbjct: 578 KGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDE 637

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A ++++ L  K +  +I+TF  +I    K G+  DA  L   I  +GL P+ VTY     
Sbjct: 638 AFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAE 697

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
              EEG+++   +L   ME     P       +++ L  +  +  A   L  +     + 
Sbjct: 698 NLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSV 757

Query: 482 DQITYNTIIRSFCK------CKDLRKAFQLLNQ 508
           +  T + ++  F         K L + +  LN+
Sbjct: 758 EASTTSLLMSIFTSDEYQHHAKSLPEKYHFLNE 790



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/588 (24%), Positives = 251/588 (42%), Gaps = 81/588 (13%)

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA---GSMEEALEFTNDM 159
           A  +R   LG  +  K LF  +L +       ++N L+  +  A    + E A+   N M
Sbjct: 20  AERARSRSLGLDDALK-LFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRM 78

Query: 160 GRH---GVEPDAITYSILAKGF----HLLSQISG-------AWK---------------- 189
            R     V P+  TYSIL   F    HL    +         W+                
Sbjct: 79  VRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHG 138

Query: 190 ---------VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL---N 237
                    ++Q++   G  PD V+YT+L+ G C     EE L+L  +M     +    N
Sbjct: 139 KRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPN 198

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD---------- 287
           V++YS++++     G++D+   L  EM   G+ PD+VTY+ +I GLCK            
Sbjct: 199 VVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQ 258

Query: 288 -------------------------KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
                                    K  + +Q+  EM ++ + P+ + +G++L  LC+  
Sbjct: 259 QMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNG 318

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
              EAR +FDS+I       V  Y I+I GY   G + E       ++E  +SP    FN
Sbjct: 319 RCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFN 378

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
                + K G +  A  + + ++ HGL P+ V Y   ++A C+ G +        +M  +
Sbjct: 379 IFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINE 438

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P  V +  ++ GLC   K + A +L+ +M   G+ P+ + +NT+I + C    + + 
Sbjct: 439 GVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEG 498

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            +L++ M    + P + +Y  LI G C+ G    A+ +   +    +S T+V Y T++  
Sbjct: 499 RRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHG 558

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEI 610
           +C+   +  A   F +M+ KG    +  Y      +  +  F   +E+
Sbjct: 559 YCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKEL 606



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 168/403 (41%), Gaps = 30/403 (7%)

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK---QDKVHKAIQLYNEM---CSKR 303
           +S  +D+AL L  E+        +  ++ L+  + +         A+  +N M   CS +
Sbjct: 26  RSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDK 85

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++PN   +  ++   C    +      F  ++ +    D +  N ++ G      +GEA+
Sbjct: 86  VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145

Query: 364 Q-LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI-KLHGLE--PSAVTYTTF 419
             L +++ E    P  V++  L+ G C   +  +A  LL  +   HG    P+ V+Y+  
Sbjct: 146 DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIV 205

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N +  EG + +   L  EM  + I P  VTYT VI GLCK      A  + + M   G 
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGF 265

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+  TYN +I  +      ++  Q+L +M    L+P   TY  L++ LC NG  + A  
Sbjct: 266 KPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARF 325

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
              S+    I      Y  +I  +  +G + +  +F   MVE                  
Sbjct: 326 FFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVE------------------ 367

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             NG  PD  I  +   A+ + G +    ++   M + GL P+
Sbjct: 368 --NGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPN 408


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/421 (31%), Positives = 214/421 (50%), Gaps = 1/421 (0%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M    V P A T++ +A GF    ++    +V Q ++  G       Y +LI   C++GN
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
            +E  KL   M  + FK   IAYS +++ +CK  R++EA  L+ +M A    PD +TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           ++  LCK  ++  A+    EM ++ I P++F +  +L GLC++E + EAR+ F+ ++   
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              +VV YN +I+G  K   I  A +L++++  K   P+ V++N+LI GFCK   +  A+
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            + D +      P+ VTYTT ++   + G +Q    +L  M  K + P   TY+ +I G 
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK  ++ EA +LLE M   G+ P  +TYN ++ S C+   L  AF+L   M      PT 
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TYN L+  LC +  L  A  L   +         + Y T+       G VH+A     +
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419

Query: 579 M 579
           M
Sbjct: 420 M 420



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 224/421 (53%), Gaps = 1/421 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P   + N +   + K G  E  K ++  M++ G    A  Y ILI  LC  G+ +EA + 
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + M     +  AI YS +      L+++  A ++I+K+  + + PD +TY  ++   C+
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCK 126

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              +++ L   E M ++G K +   Y+ +LS +C+  +++EA  L  +M    + P++VT
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI GLCK  ++  A +L+ EM  K   P   ++  ++ G C+K+ +  A+  FD ++
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            SNC+ +VV Y  +IDG  K G +  A ++   +++K ++P++ T++ LI GFCK  +V 
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A +LL+ +   G+ P+ VTY   +N+ C    ++    L + M  +   PT VTY  ++
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           + LC   +L  A +L  +M   G  PD ITY+T+     +   + +A +L+ +M L    
Sbjct: 367 RALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRN 426

Query: 516 P 516
           P
Sbjct: 427 P 427



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 214/415 (51%), Gaps = 1/415 (0%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P A ++N +  G   AG +E+  E    M   G    A  Y IL      +     A+K+
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           +  + +K      + Y+ +I   C++  VEE  +L E M ++    + + Y  ++  +CK
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCK 126

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           + RID+AL  + EM   G+KPD   Y+ ++ GLC+++KV +A  L+ +M  +RI+PN   
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ GLC+   I  A   F  +     +   V YN +IDG+ K  ++  A  ++ +++
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
                P++VT+ +LI G  K+GKV  A  +LD +   G+ P+  TY+  ++ +C+   + 
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               LL++M T+ I PT VTY +++  LC+  KL++A +L   M      P  +TYNT++
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           R+ C  K L  A +L  +M      P + TY+ L  GL   G +  A  L+  ++
Sbjct: 367 RALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 214/414 (51%), Gaps = 1/414 (0%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P   T+  +  G+ + G +E+  ++ + M+  G+ L    Y +L+S +CK G  DEA  L
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L+ M     K   + YS +I  LCK ++V +A +L  +M ++   P++  +G I+  LC+
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCK 126

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
            + I +A    + +       D  +YN ++ G  +   + EA  L+ +++++RI+P++VT
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +N+LI G CK  ++  A  L   +   G  P+ V+Y T ++ +C++ ++     +  +M 
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
                P  VTYT +I GL K  K+Q A ++L+ M   GVTP+  TY+ +I  FCK + + 
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +A +LL QM    + PT  TYNIL++ LC    L++A  L   + +     T V Y T++
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
           +A C    +  A   + +M+ KG       Y    + +  +      QE+ E M
Sbjct: 367 RALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 186/379 (49%), Gaps = 1/379 (0%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I+I  LC+     +A   L     K F    ++ + I++  CKL   E A+ L   M +Y
Sbjct: 50  ILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARY 109

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
              PDA +Y  ++  LC    +++AL    +M   G++PDA  Y+ +  G     ++  A
Sbjct: 110 A-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEA 168

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             + +K++ +  +P++VTY  LI G C+   +E   +L + M  +G+    ++Y+ L+  
Sbjct: 169 RLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDG 228

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            CK   +  A  +  +M      P++VTY+ LI GL K  KV  A ++ + M  K ++PN
Sbjct: 229 FCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPN 288

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  ++ G C+   + EA    + ++       VV YNI+++   +   + +A +L+R
Sbjct: 289 VATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFR 348

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            + ++R  P++VT+N+L+   C + ++  A RL   +   G  P A+TY T        G
Sbjct: 349 GMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAG 408

Query: 428 NIQRLLALLQEMETKAIGP 446
            +     L+++M+     P
Sbjct: 409 KVHEAQELMEKMKLTKRNP 427



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 162/317 (51%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P +  T   +++ LC+  R+ DA+  ++E A +   P     N ++S  C+    E A+ 
Sbjct: 111 PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 170

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  M+K  ++P+  +YN LI+GLC A  +E A E   +M   G  P  ++Y+ L  GF 
Sbjct: 171 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 230

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               +  A  V  K++     P++VTYT LI G  + G V+   ++ + M+ +G   NV 
Sbjct: 231 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 290

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            YS L+   CK  R+DEA  LL +M   G+ P +VTY+IL+  LC+ DK+  A +L+  M
Sbjct: 291 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 350

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             +R  P    +  +L  LC  + +  A   +  +I   C  D + Y+ +  G  + G +
Sbjct: 351 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKV 410

Query: 360 GEAVQLYRQLIEKRISP 376
            EA +L  ++   + +P
Sbjct: 411 HEAQELMEKMKLTKRNP 427



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 157/302 (51%), Gaps = 3/302 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           +T  + DA+  + +M    +K     YN +L  L   + + +   L++ +       NV 
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 185

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I+GLC+  R++ A    +E AGK + P+ VS N ++  +CK      AK +F  M
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++    P+  +Y  LI GL  +G ++ A E  + M + GV P+  TYS L  GF  + ++
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV 305

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A K++++++ +G  P +VTY +L+   C+   +E+  KL   M  +     V+ Y+ L
Sbjct: 306 DEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTL 365

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L ++C   ++D A  L  EM A G  PD +TY  L  GL +  KVH+A +L  +M   + 
Sbjct: 366 LRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKR 425

Query: 305 SP 306
           +P
Sbjct: 426 NP 427



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 156/358 (43%), Gaps = 16/358 (4%)

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  +R+ P +     +  G  +   + + +  +  ++ +        Y I+I    K+GN
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             EA +L   +  KR     + ++++I   CK  +V +AR L++ +  +   P A+TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +   C+   I   LA ++EM T+ I P    Y  V+ GLC++ K++EA  L E M    
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           + P+ +TYNT+I   CK   +  A++L  +M      PT  +YN LIDG C   DL  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT--KSFF 596
            +   +   N     V YTT+I      G V  A      MV+KG   ++  Y+     F
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 597 C-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           C              M++ G  P      ++L +  +   L   F+L   M +    P
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHP 357


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 158/609 (25%), Positives = 291/609 (47%), Gaps = 40/609 (6%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S ++  L Q+   + A++   +  G    P V   + +++ +C++G  +VA  +   M+K
Sbjct: 195 SFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVK 254

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL P+  +YN L++G    G  E        M   GV  + +T ++L +G+    ++  
Sbjct: 255 EGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDE 314

Query: 187 AWKVIQ-----KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           A K+++     +LL+     D   Y VL+ GYCQ+G +E+ +++R+ ML  G K+N++  
Sbjct: 315 AEKLLREVEEDELLV----VDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVIC 370

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   CK G++ EA  +   M    LKPD  +Y+ L+ G C++ KV KA  L  EM  
Sbjct: 371 NTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLG 430

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             I+P    +  ++ GL +     +A   +  ++      + +    M+D + K+G+   
Sbjct: 431 DGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDR 490

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ L+++++ +  + S V FN++I G CK GK+ +A  + D +K  GL P  +TY T  +
Sbjct: 491 AMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSD 550

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC+ GN+Q    +   ME +A+  +   Y  +I GL K  KL +   LL +M   G++P
Sbjct: 551 GYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSP 610

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           + +TY T+I  +C  + L KAF L  +M      P     + ++  L  +  +  A  +L
Sbjct: 611 NVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVIL 670

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG---------------FEI 586
             + + +I          +   C++  V   +T   Q +                  + I
Sbjct: 671 DKMLDFDI--------LAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNI 722

Query: 587 SIR--------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
           +I         D  +S   +++S GF PD      ++ A    G++   F+L   M++ G
Sbjct: 723 AIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKG 782

Query: 639 LLPDKFLIN 647
           L+P+  + N
Sbjct: 783 LIPNITIYN 791



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 261/526 (49%), Gaps = 7/526 (1%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           KEFG      + +M  + + G  + A  +F  M + G  P   S + L+  L   G    
Sbjct: 150 KEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRV 209

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A+   + +   G+ PD    SI+      + ++  A +V++K++ +G +P++VTY  L+ 
Sbjct: 210 AVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVN 269

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL-K 270
           GY   G+ E   ++  +M  +G   NV+  ++L+   CK G++DEA  LL E+E   L  
Sbjct: 270 GYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLV 329

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
            D   Y +L+ G C+  ++  A+++ +EM    +  N      ++ G C+   + EA   
Sbjct: 330 VDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERV 389

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           F  ++  N   D   YN ++DGY + G + +A  L  +++   I+P++VT+N++I G   
Sbjct: 390 FVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVD 449

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G   DA  L   +   G+ P+ ++  T ++ + + G+  R + L +E+  +    + V 
Sbjct: 450 VGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVA 509

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           +  +I GLCK  KL EA  + + M  +G++PD+ITY T+   +CK  ++++AFQ+   M 
Sbjct: 510 FNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVME 569

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              +  +   YN LIDGL     L +   LLV +Q   +S   V Y T+I   C E  + 
Sbjct: 570 RQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLD 629

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
           KA   + +M+E+GF  ++        C  + +    D  I E  +I
Sbjct: 630 KAFHLYFEMIERGFTPNV------VVCSKIVSSLYRDDRISEATVI 669



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 259/529 (48%), Gaps = 16/529 (3%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           +++DG CQ  R++DA+    E        ++V  N ++  YCKLG    A+ +F  M+ +
Sbjct: 337 VLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDW 396

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            L PD +SYN L+ G C  G + +A     +M   G+ P  +TY+ + KG   +     A
Sbjct: 397 NLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDA 456

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             +   ++ +G  P+ ++   ++  + ++G+ +  + L + +L +GF  + +A++ ++S 
Sbjct: 457 LHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISG 516

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK G++ EA  +   M+ +GL PD +TY  L  G CK   V +A Q+   M  + +S +
Sbjct: 517 LCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSAS 576

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              + +++ GL +   + +       +       +VV Y  +I G+     + +A  LY 
Sbjct: 577 IEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYF 636

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++IE+  +P++V  + ++    ++ ++++A  +LD  K+   +  AV      +  C + 
Sbjct: 637 EMIERGFTPNVVVCSKIVSSLYRDDRISEATVILD--KMLDFDILAV------HNKCSDK 688

Query: 428 NIQRLLALLQEMETKAIGPT--------HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
            ++  L L  +    ++  +        ++ Y + I GLCK  KL EA  +L  +   G 
Sbjct: 689 LVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGF 748

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD  TY T+I +     ++ +AF+L ++M    L P    YN LI+GLC  G++  A  
Sbjct: 749 LPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQR 808

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           L   L +  +    V Y  +I  +C  GD+ KA     +M E+G    I
Sbjct: 809 LFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRI 857



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 170/699 (24%), Positives = 300/699 (42%), Gaps = 66/699 (9%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVS 57
           ML   ++  GM   A++V  +M  +     +++ + LL  L       +   ++D I  +
Sbjct: 161 MLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGT 220

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +VY  SIV++  CQ  R+  A+  L++   +   P+VV+ N +++ Y   G  E  
Sbjct: 221 GIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGV 280

Query: 118 KGLFCLMLKYGLHPDAFS------------------------------------YNILIH 141
           + +  LM + G+  +  +                                    Y +L+ 
Sbjct: 281 ERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVD 340

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
           G C  G ME+A+   ++M R G++ + +  + L KG+  L Q+  A +V   ++     P
Sbjct: 341 GYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKP 400

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D  +Y  L+ GYC+ G V +   L E ML  G    V+ Y+ ++  +   G  D+AL L 
Sbjct: 401 DCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLW 460

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
           + M   G+ P+ ++   ++    K     +A+ L+ E+  +  + ++ A   ++ GLC+ 
Sbjct: 461 HLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKM 520

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             + EA   FD +       D + Y  + DGY K GN+ EA Q+   +  + +S SI  +
Sbjct: 521 GKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMY 580

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           NSLI G  K  K+ D   LL  ++  GL P+ VTY T ++ +C+E  + +   L  EM  
Sbjct: 581 NSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIE 640

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY------VIGVTPDQITYNTIIRSFCK 495
           +   P  V  + ++  L +  ++ EA  +L+ M       V     D++  N +     K
Sbjct: 641 RGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQK 700

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
             D      + N +        +  YNI IDGLC +G L  A  +L  L           
Sbjct: 701 IADSLDKSDICNSL------SNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFT 754

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR---------------DYTKSFFCMML 600
           Y T+I A    G+V +A     +M+EKG   +I                D  +  F  + 
Sbjct: 755 YCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLY 814

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
             G  P+     +++  + + GDL     L   M + G+
Sbjct: 815 QKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGI 853



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/452 (23%), Positives = 190/452 (42%), Gaps = 83/452 (18%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI--------MWDLYDDIKVS 57
           Y R G V  A  +  +M    +  ++ TYN+++  L   D+        +W L   ++  
Sbjct: 412 YCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGL--VDVGSYDDALHLWHLM--VERG 467

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            TP N  +   ++D   +      A++  +E  G+ F  S V+ N ++S  CK+G    A
Sbjct: 468 VTP-NEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEA 526

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH--------------- 162
             +F  M + GL PD  +Y  L  G C  G+++EA +    M R                
Sbjct: 527 GAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDG 586

Query: 163 --------------------GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
                               G+ P+ +TY  L  G+    ++  A+ +  +++ +G  P+
Sbjct: 587 LFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPN 646

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLS---------------------QGFKL----- 236
           +V  + ++    +   + E   + + ML                      +  K+     
Sbjct: 647 VVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLD 706

Query: 237 ---------NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
                    N I Y++ +  +CKSG++DEA  +L  + + G  PD  TY  LI       
Sbjct: 707 KSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSG 766

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
            V +A +L +EM  K + PN   + A++ GLC+   I  A+  F  L     + + V YN
Sbjct: 767 NVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYN 826

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           I+I  Y ++G++ +A +L  ++ E+ IS  I+
Sbjct: 827 ILIGCYCRIGDLDKASRLREKMTEEGISTRII 858


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 151/600 (25%), Positives = 291/600 (48%), Gaps = 45/600 (7%)

Query: 5   VYSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTDIMWDLYDDI-----KVSE 58
            Y++  M   A+ +  +M E+   +  I++YNSLL  L  ++  WD  +        +  
Sbjct: 87  AYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESN-KWDEAESFFLYFETMGL 145

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           +P N+ T +I+I   C++ +   A   L     + F P V S   +++   K G+   A 
Sbjct: 146 SP-NLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDAL 204

Query: 119 GLFCLMLKYGLHPDAF------------------------------------SYNILIHG 142
            LF  M + G+ PD                                      SYN++I+G
Sbjct: 205 KLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMING 264

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           LC  G  +E+ E  + M ++    D  TYS L  G      + GA +V +++   G  PD
Sbjct: 265 LCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPD 324

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           +V Y  ++ GY + G +EE L+L +VM  +G +  V++Y++L+  + ++ ++DEA+ +  
Sbjct: 325 VVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWE 383

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
            +       D +TY +L+ GLCK   ++KA+ +  E  + R   ++FA+ +++ GLC + 
Sbjct: 384 LLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREG 443

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            + E     D +    C  +  + N +I+G+V+   + +A++ +  ++ K   P++VT+N
Sbjct: 444 RLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYN 503

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           +LI G  K  + ++A  L+  +   G +P+ +TY+  MN  C+   +   L L  +   K
Sbjct: 504 TLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK 563

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
              P    + ++I GLC   K+++A+QL  +M      P+ +T+NT++  F K +D  +A
Sbjct: 564 GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERA 623

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            ++ + +  +  +P   +YNI + GLC    + +A   L    +  +  T + +  +++A
Sbjct: 624 SKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRA 683



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/520 (25%), Positives = 253/520 (48%), Gaps = 11/520 (2%)

Query: 22  MKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSR 78
           M E      + +Y +L+ +L     M D   L+D++       +V   +I+IDG  ++  
Sbjct: 175 MWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGD 234

Query: 79  LQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           + +A  ++ +   G    P++ S N +++  CK G  + +  ++  M K     D ++Y+
Sbjct: 235 ILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYS 294

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA---WKVIQKL 194
            LIHGLC +G+++ A     +M  +GV PD + Y+ +  G+    +I      WKV++K 
Sbjct: 295 TLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 354

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             +     +V+Y +LI G  +   V+E + + E++  +    + + Y VL+  +CK+G +
Sbjct: 355 GCR----TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 410

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           ++AL +L E E      D   YS +I GLC++ ++ +   + ++M      PN     A+
Sbjct: 411 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAV 470

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G      + +A  +F +++   C   VV YN +I+G  K     EA  L ++++ K  
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW 530

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P+++T++ L+ G C+  K+  A  L       G +P    +   ++  C  G ++  L 
Sbjct: 531 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 590

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L  EM+ +   P  VT+  +++G  K    + A ++ + +   G  PD I+YN  ++  C
Sbjct: 591 LYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLC 650

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
            C  +  A   LN      + PT+ T+NIL+  +  NG L
Sbjct: 651 SCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 139/570 (24%), Positives = 251/570 (44%), Gaps = 59/570 (10%)

Query: 76  QSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           ++ + D  L + +   + FG  P + S N++++   +    + A+  F      GL P+ 
Sbjct: 90  KNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNL 149

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
            +YNILI   C     ++A E  N M   G  PD  +Y  L         +S A K+  +
Sbjct: 150 QTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDE 209

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML-SQGFKLNVIAYSVLLSSMCKSG 252
           +  +G  PD+  Y +LI G+ + G++    ++ E +L       N+ +Y+V+++ +CK G
Sbjct: 210 MPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCG 269

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           + DE+  + + M+      DL TYS LI GLC    +  A ++Y EM    +SP      
Sbjct: 270 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSP------ 323

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
                                        DVV+YN M++GY++ G I E ++L++ ++EK
Sbjct: 324 -----------------------------DVVVYNTMLNGYLRAGRIEECLELWK-VMEK 353

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
               ++V++N LI G  +N KV +A  + + +        ++TY   ++  C+ G + + 
Sbjct: 354 EGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 413

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L++L+E E          Y+ +I GLC++ +L E   +L+ M   G  P+    N +I  
Sbjct: 414 LSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVING 473

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
           F +   L  A +    M      PT  TYN LI+GL        A  L+  +        
Sbjct: 474 FVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPN 533

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE 612
            + Y+ ++   C    +  A+  +CQ +EK                    GF PD ++  
Sbjct: 534 MITYSLLMNGLCQGKKLDMALNLWCQALEK--------------------GFKPDVKMHN 573

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +++      G +    +L + M +   +P+
Sbjct: 574 IIIHGLCSSGKVEDALQLYSEMKQRKCVPN 603



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 186/386 (48%), Gaps = 2/386 (0%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP--RNVYTN 66
           +G +  A  V  +M E  +   +  YN++L        + +  +  KV E    R V + 
Sbjct: 303 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSY 362

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+I GL + +++ +AI   +    K+     ++   ++   CK G+   A  +      
Sbjct: 363 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
                D F+Y+ +I+GLC  G ++E     + M +HG +P+    + +  GF   S++  
Sbjct: 423 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +    ++ KG  P +VTY  LI G  +     E   L + ML +G+K N+I YS+L++
Sbjct: 483 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN 542

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C+  ++D AL L  +    G KPD+  ++I+I GLC   KV  A+QLY+EM  ++  P
Sbjct: 543 GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVP 602

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N   H  ++ G  +      A   +D ++      D++ YNI + G      I +AV   
Sbjct: 603 NLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFL 662

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNG 392
              +++ + P+ +T+N L+     NG
Sbjct: 663 NDAVDRGVLPTAITWNILVRAVLDNG 688



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/358 (21%), Positives = 166/358 (46%), Gaps = 39/358 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y R G + + + +   M++   + ++ +YN L+  L      D    +++ +   +   +
Sbjct: 335 YLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCAD 393

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T  +++ GLC+   L  A+  L+E           + +++++  C+ G  +   G+  
Sbjct: 394 SMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 453

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K+G  P+    N +I+G   A  +E+AL F  +M   G  P  +TY+ L  G     
Sbjct: 454 QMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 513

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           + S A+ +++++L KG  P+++TY++L+ G CQ   ++  L L    L +GFK +V  ++
Sbjct: 514 RFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 573

Query: 243 VLLSSMCKSGRIDEALGLLYEMEA-----------------------------------V 267
           +++  +C SG++++AL L  EM+                                     
Sbjct: 574 IIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQY 633

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
           G +PD+++Y+I ++GLC   ++  A+   N+   + + P +     ++  + +   +T
Sbjct: 634 GPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGALT 691



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 24/302 (7%)

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADA 397
           C +DV L   +I  Y K     +A+ +++++ E     P I ++NSL+    ++ K  +A
Sbjct: 76  CPEDVAL--TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEA 133

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
                  +  GL P+  TY   +   C +    +   LL  M  +   P   +Y  +I  
Sbjct: 134 ESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINS 193

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL-HNLEP 516
           L K   + +A++L ++M   GVTPD   YN +I  F K  D+  A ++  ++    ++ P
Sbjct: 194 LAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYP 253

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              +YN++I+GLC  G    +  +   ++++        Y+T+I   C  G++  A   +
Sbjct: 254 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVY 313

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
            +M E                    NG  PD  +   ML  + + G +    EL  VM K
Sbjct: 314 KEMAE--------------------NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353

Query: 637 SG 638
            G
Sbjct: 354 EG 355



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 84/211 (39%), Gaps = 24/211 (11%)

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY-VIGVTPDQIT 485
            ++ R++ L++  + K   P  V  TV IK   K     +A+ + + M+ + G  P   +
Sbjct: 60  AHVSRIVELIRTQKCKC--PEDVALTV-IKAYAKNSMPDQALDIFQRMHEIFGCQPGIRS 116

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YN+++ +  +     +A           L P   TYNILI   C       A  LL  + 
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 176

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
           E   S    +Y T+I +    G +  A+  F +M E+G                      
Sbjct: 177 EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVT-------------------- 216

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           PD     +++  F + GD+ +  E+   ++K
Sbjct: 217 PDVACYNILIDGFFKKGDILNASEIWERLLK 247


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 238/467 (50%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  ML     P  F +N ++  L        A+  +  +   G+  D +T +IL  
Sbjct: 53  AVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILIN 112

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F  L QI+ ++ V+  +L +G  PD++T T LI G C  G V++ LK  + +++  F+L
Sbjct: 113 CFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQL 172

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + I+Y  L++ +CK G    A+ L+  +E   +KPD+V Y+I+I  LCK   V +A  LY
Sbjct: 173 DRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLY 232

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           +EM +K+I PN   +  ++ G C    + EA    + + + N   DV  ++I+ID   K 
Sbjct: 233 SEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKE 292

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G +  A  +   +++  + P +VT+NSL+ G+    +V  A+ + +++   G+ P   +Y
Sbjct: 293 GKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSY 352

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           T  ++  C+   +   ++L +EM+ K + P  +T+  +I GLCK  ++     L++ M  
Sbjct: 353 TIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRD 412

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
                D ITY+++I + CK   L +A  L  +M    ++P   TY ILIDGLC  G LK 
Sbjct: 413 RSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKI 472

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           A  +   L      L    YT +I   C  G   +A+    +M + G
Sbjct: 473 AQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNG 519



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 144/499 (28%), Positives = 257/499 (51%), Gaps = 1/499 (0%)

Query: 43  HTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLN 102
           H D +  L++ + +   P   +  + ++  L +  R   AI   +    K     +V+LN
Sbjct: 50  HNDAVA-LFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLN 108

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
            +++ +C LG   ++  +   +LK G HPD  +   LI GLC+ G +++AL+F +D+   
Sbjct: 109 ILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVAL 168

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
             + D I+Y  L  G   + +   A ++++ L  +   PD+V Y ++I   C+   V E 
Sbjct: 169 EFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEA 228

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
             L   M ++    NV+ Y+ L+   C  G + EA+ LL EM+   + PD+ T+SILI  
Sbjct: 229 CNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDA 288

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           L K+ K+  A  +   M    + P+   + +++ G      +  A+  F+S+  S     
Sbjct: 289 LGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPG 348

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           V  Y IMIDG  K   + EA+ L+ ++  K + P+ +TFNSLI G CK+G++A    L+D
Sbjct: 349 VQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVD 408

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            ++        +TY++ ++A C+  ++ + +AL ++M T+ I P   TYT++I GLCK  
Sbjct: 409 KMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGG 468

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           +L+ A ++ + + + G   D  TY  +I  FCK     +A  LL++M  +   P + T++
Sbjct: 469 RLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFD 528

Query: 523 ILIDGLCVNGDLKNADCLL 541
           I+I  L    +   A+ LL
Sbjct: 529 IIICALFEKDENDKAEKLL 547



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 213/418 (50%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T + +I GLC +  ++ A+ F  +    EF    +S   +++  CK+G  + A  L 
Sbjct: 138 DVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLM 197

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             + +  + PD   YNI+I  LC    + EA    ++M    + P+ +TY+ L  GF ++
Sbjct: 198 RNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIM 257

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A  ++ ++ +K  +PD+ T+++LI    + G ++    +  VM+    K +V+ Y
Sbjct: 258 GCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTY 317

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+        +  A  +   M   G+ P + +Y+I+I GLCK   V +AI L+ EM  
Sbjct: 318 NSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKH 377

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K + PN+    +++ GLC+   I       D +   + + DV+ Y+ +ID   K  ++ +
Sbjct: 378 KNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQ 437

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ L++++I + I P + T+  LI G CK G++  A+ +   + + G      TYT  ++
Sbjct: 438 AIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMIS 497

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
            +C+ G     LALL +ME     P  +T+ ++I  L ++ +  +A +LL +M   G+
Sbjct: 498 GFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 228/508 (44%), Gaps = 50/508 (9%)

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
            +A+   N M      P    ++ +      + +   A  + + L  KG   D+VT  +L
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I  +C +G +     +   +L +G+  +VI  + L+  +C  G + +AL    ++ A+  
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           + D ++Y  LI GLCK  +   AIQL   +  + I P                       
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKP----------------------- 207

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
                       DVV+YNI+ID   K   +GEA  LY ++  K+I P++VT+ +LIYGFC
Sbjct: 208 ------------DVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFC 255

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
             G + +A  LL+ +KL  + P   T++  ++A  +EG ++    +L  M    + P  V
Sbjct: 256 IMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVV 315

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY  ++ G     +++ A  +   M   GVTP   +Y  +I   CK K + +A  L  +M
Sbjct: 316 TYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEM 375

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
              N+ P + T+N LIDGLC +G +     L+  +++ +     + Y+++I A C    +
Sbjct: 376 KHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHL 435

Query: 570 HKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVM 614
            +A+  F +M+ +  +  +  YT               +  F  +L  G+  D     VM
Sbjct: 436 DQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVM 495

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +  F + G       L + M  +G +P+
Sbjct: 496 ISGFCKAGLFDEALALLSKMEDNGCIPN 523



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 192/395 (48%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
            +DD+   E   +  +   +I+GLC+    + AI  ++    +   P VV  N I+   C
Sbjct: 161 FHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLC 220

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           K      A  L+  M    ++P+  +Y  LI+G CI G + EA+   N+M    + PD  
Sbjct: 221 KNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVY 280

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           T+SIL        ++  A  V+  ++     PD+VTY  L+ GY  +  V+    +   M
Sbjct: 281 TFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSM 340

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
              G    V +Y++++  +CK+  +DEA+ L  EM+   + P+ +T++ LI GLCK  ++
Sbjct: 341 AQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRI 400

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
                L ++M  +    +   + +++  LC+   + +A   F  +I      D+  Y I+
Sbjct: 401 AYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTIL 460

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           IDG  K G +  A ++++ L+ K     I T+  +I GFCK G   +A  LL  ++ +G 
Sbjct: 461 IDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGC 520

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
            P+A+T+   + A  E+    +   LL+EM  + +
Sbjct: 521 IPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 195/392 (49%), Gaps = 1/392 (0%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
           V+A   +LD ++S  T  + L  +  T     L  +++      +V   +I+ID LC+  
Sbjct: 165 VVALEFQLD-RISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNK 223

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
            + +A     E   K+  P+VV+   ++  +C +G    A  L   M    ++PD ++++
Sbjct: 224 LVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFS 283

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           ILI  L   G M+ A      M +  V+PD +TY+ L  G+ L++++  A  V   +   
Sbjct: 284 ILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQS 343

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  P + +YT++I G C+   V+E + L E M  +    N I ++ L+  +CKSGRI   
Sbjct: 344 GVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYV 403

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             L+ +M       D++TYS LI  LCK   + +AI L+ +M ++ I P+ + +  ++ G
Sbjct: 404 WDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDG 463

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC+   +  A+  F  L++     D+  Y +MI G+ K G   EA+ L  ++ +    P+
Sbjct: 464 LCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPN 523

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
            +TF+ +I    +  +   A +LL  +   GL
Sbjct: 524 AITFDIIICALFEKDENDKAEKLLREMIARGL 555



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 101/194 (52%), Gaps = 3/194 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPRNVY 64
           +T MV +A+ +  +MK  ++  +  T+NSL+  L  +     +WDL D ++      +V 
Sbjct: 361 KTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVI 420

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S +ID LC+   L  AI   ++   +E  P + +   ++   CK G  ++A+ +F  +
Sbjct: 421 TYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHL 480

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L  G H D  +Y ++I G C AG  +EAL   + M  +G  P+AIT+ I+        + 
Sbjct: 481 LIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDEN 540

Query: 185 SGAWKVIQKLLIKG 198
             A K++++++ +G
Sbjct: 541 DKAEKLLREMIARG 554


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 144/524 (27%), Positives = 263/524 (50%), Gaps = 18/524 (3%)

Query: 75  QQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           + SR   AI F  + AG++ G    V S N ++    K G       ++  +L  G  P+
Sbjct: 3   RSSRPDLAIQFF-DWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPN 61

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
             ++ ILI G C AG    ALEF   +    V PD   ++ L  G         A K+ +
Sbjct: 62  LVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFE 121

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK--LNVIAYSVLLSS-MC 249
            +     +PDI TY  +I G C+ GN+E+  +L E M+ +G K   +++ Y+ L+++ +C
Sbjct: 122 NMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGIC 181

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K G ++EAL +L  M+  G  PD++TY+ +I  LC   +V +A ++   M     SP+  
Sbjct: 182 KDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSC---SPDLV 238

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
               +L G C+  M+  A    + +   N + DV+ Y I+++G  ++G +  A  L  ++
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 298

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH---------GLEPSAVTYTTFM 420
           + +   P ++ + SL+ G CK+G++ +A +L+  +             + P   TY   +
Sbjct: 299 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVL 358

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
               ++G+I + ++L+ ++  +   P  VTY  +I GLCK  +++EA  L ++M  +G  
Sbjct: 359 GGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCF 418

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ +T  +++   C+   +  A+ L+ +M      P    Y  LIDGLC +  + +A  +
Sbjct: 419 PNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVV 478

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           L +++   ++L   AY  +I +    G V +AM  + +MV +GF
Sbjct: 479 LDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGF 522



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 248/512 (48%), Gaps = 18/512 (3%)

Query: 28  KVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAIL 84
           K  + +YN LL  L    H      +Y D+  S    N+ T  I+I G C+  +   A+ 
Sbjct: 24  KHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALE 83

Query: 85  FLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
           FL+        P V   N ++    K G  + A  LF  M    ++PD F+YN +I GLC
Sbjct: 84  FLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLC 143

Query: 145 IAGSMEEALEFTNDMGRHGVE--PDAITYSILAK-GFHLLSQISGAWKVIQKLLIKGSDP 201
            +G++E+A E   +M R G +  PD +TY+ L   G      +  A +++  + + G  P
Sbjct: 144 KSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAP 203

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D++TY  +I   C  G V E     E++ +     +++ ++ LL   CK+G +  AL +L
Sbjct: 204 DVITYNSIIHALCVAGRVVEAA---EILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVL 260

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            EM    + PD++TY+IL+ GLC+  +V  A  L  E+  +   P+  A+ +++ GLC+ 
Sbjct: 261 EEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKS 320

Query: 322 EMITEA---------RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
             I EA         R     ++  N +  +  YNI++ G +K G+I +AV L   L+ +
Sbjct: 321 GEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVAR 380

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P +VT+N+LI G CK  +V +A  L D +   G  P+ VT  + +   C  G +   
Sbjct: 381 GYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDA 440

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
            +L+ EM  K   P  V YT +I GLCK  ++ +A  +L+ M   GV  D   Y  +I S
Sbjct: 441 WSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVS 500

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
                 + +A  + ++M      P  +T   L
Sbjct: 501 MIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 248/527 (47%), Gaps = 35/527 (6%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G   D  SYN L+  L  +G      +   D+   G  P+ +T+ IL +G     Q + A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            + ++ L      PD+  +  LI G  + GN ++ +KL E M S     ++  Y+ ++S 
Sbjct: 82  LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141

Query: 248 MCKSGRIDEALGLLYEMEAVGLK--PDLVTYSILIR-GLCKQDKVHKAIQLYNEMCSKRI 304
           +CKSG +++A  LL EM   G K  PD+VTY+ LI  G+CK   V +A+++ + M     
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +P+   + +I+  LC    + EA     ++   +C  D+V +N ++DG+ K G +  A++
Sbjct: 202 APDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALE 258

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +  ++  + I P ++T+  L+ G C+ G+V  A  LL+ I   G  P  + YT+ ++  C
Sbjct: 259 VLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC 318

Query: 425 EEGNIQRLLALLQEMETKAI---------GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           + G I+    L++EM  + I          P   TY +V+ GL K   + +AV L+ D+ 
Sbjct: 319 KSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV 378

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G  PD +TYNT+I   CK   +R+A  L ++M      P   T   ++ GLC  G + 
Sbjct: 379 ARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVD 438

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF 595
           +A  L+V +     +   V YT++I   C    +  A      M  +G  +    Y K  
Sbjct: 439 DAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRK-- 496

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                             ++++   GG +     +   M+  G LPD
Sbjct: 497 ------------------LIVSMIHGGRVAEAMAMYDEMVARGFLPD 525



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 169/344 (49%), Gaps = 9/344 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + G V +A+ ++  MK       + TYNS+++ L     + +  + +K      ++ T +
Sbjct: 182 KDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLVTFN 241

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
            ++DG C+   L  A+  L+E   +   P V++   +++  C++G  +VA  L   +++ 
Sbjct: 242 TLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQ 301

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV---------EPDAITYSILAKGF 178
           G  PD  +Y  L+ GLC +G +EEA +   +M    +          P   TY+I+  G 
Sbjct: 302 GYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGL 361

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                IS A  +I  L+ +G  PD+VTY  LI G C+   V E   L + M S G   N 
Sbjct: 362 IKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPND 421

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           +    ++  +C+ GR+D+A  L+ EM      P++V Y+ LI GLCK D++  A  + + 
Sbjct: 422 VTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDA 481

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           M  + ++ + FA+  +++ +     + EA   +D ++    + D
Sbjct: 482 MRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPD 525


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 157/576 (27%), Positives = 276/576 (47%), Gaps = 44/576 (7%)

Query: 3   AFVYSRTGMVHDAVFVIAKMKELDLKVS--IQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           AFV +R     DA F          +++  +QTYN +L +L      D    L+D ++  
Sbjct: 129 AFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCR 188

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +  T S ++ G  + +RL +A+  L E    E  P  V  NA++    + G  E A
Sbjct: 189 GLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKA 248

Query: 118 KGLFCLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
             ++  +++  G  P+  +YN+++ GLC  G  +EA +    M  +  +PD ITY  +  
Sbjct: 249 MRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIH 308

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G    + +  A +V  +++  G  PD+V Y  L+ G+C  G V E  K  + M   G + 
Sbjct: 309 GLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR- 367

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAV-GLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           NV +Y+++L  +   G +D+A  L   +E    L PD+VT+S +I GLC++   +K++Q+
Sbjct: 368 NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQI 427

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
             E  +     + F++ +++ GLC+   + +A   ++ + M +   +  +YN +I+G+ +
Sbjct: 428 LEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQ 487

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
                +A+++Y Q+ E   SP+ +T+N+LI+G CK  K  +A R    +   G      T
Sbjct: 488 ASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNT 547

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y + +   C +  I   LAL  ++  K +    V + ++I GLC   K+ EA QLL +M 
Sbjct: 548 YGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMK 607

Query: 476 --------VI----------------------------GVTPDQITYNTIIRSFCKCKDL 499
                   V+                            G+ PD I+YNT I+  C C   
Sbjct: 608 EKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRT 667

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            +  QLLN+M    + PT+ T+NIL+  +   G ++
Sbjct: 668 PEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 163/609 (26%), Positives = 283/609 (46%), Gaps = 49/609 (8%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAIL--FLQETAGKEFGPSVVSLNAIMSRYCKLG 112
           ++   PR   + ++V+     ++ + DA L  F +  +     P V S NA++  + +  
Sbjct: 75  RLRHRPRFSESAALVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRAR 134

Query: 113 FAEVAKGLFCLMLKYG-----LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
               A   F   L +G     + P+  +YNI++  LC+ G ++ A+   + +   G+ PD
Sbjct: 135 RFSDADAFFA-SLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPD 193

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            ITYS L  GF   +++  A  ++ ++      PD V Y  L+ G  + G  E+ +++ E
Sbjct: 194 RITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWE 253

Query: 228 VMLSQ-GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
            ++   G   N+  Y+V+L  +CK G   EA  +   M A   +PD++TY  +I GLC+ 
Sbjct: 254 QLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRS 313

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
             V  A ++Y+EM    + P+   + ++L G C    + EA  ++DS+ +S  I++V  Y
Sbjct: 314 TDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSG-IRNVTSY 372

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEK--RISPSIVTFNSLIYGFC--------------- 389
           NIM+ G    G + +A  L+ +L+EK   +SP +VTF+++I+G C               
Sbjct: 373 NIMLKGLFDGGMVDKATDLW-ELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEA 431

Query: 390 --------------------KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
                               K+G++ DA +L + I +   +P++  Y   +N +C+    
Sbjct: 432 RTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKF 491

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
              + +  +M      PT +TY  +I GLCK  K  EA +   +M   G   D  TY ++
Sbjct: 492 SDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSL 551

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE-HN 548
           IR  C+ K +  A  L NQ+    L+     +NILI GLC  G +  A  LL  ++E +N
Sbjct: 552 IRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNN 611

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ 608
                V Y T++      G   KA + +  ++E G    I  Y      +   N  P   
Sbjct: 612 CCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGV 671

Query: 609 EICEVMLIA 617
           ++   ML +
Sbjct: 672 QLLNEMLAS 680



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 141/526 (26%), Positives = 247/526 (46%), Gaps = 6/526 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+ T +I++  LC +  L  A+        +   P  ++ + +MS + K    + A  L 
Sbjct: 158 NLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLL 217

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH-GVEPDAITYSILAKGFHL 180
             M  Y + PDA  YN L+ G    G  E+A+     + R  G  P+  TY+++  G   
Sbjct: 218 DEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCK 277

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L     A  V ++++     PD++TY  +I G C+  +V+   ++   M+  G   +V+ 
Sbjct: 278 LGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVI 337

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ LL   C +GR+ EA      M   G++ ++ +Y+I+++GL     V KA  L+ E+ 
Sbjct: 338 YNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLW-ELL 395

Query: 301 SK--RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
            K   +SP+      ++ GLCEK    ++    +    S    D   Y+ MI G  K G 
Sbjct: 396 EKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGR 455

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + +AV+LY ++      P+   +N+LI GFC+  K +DA R+   +  +   P+ +TY T
Sbjct: 456 LDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNT 515

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++  C+           +EM  K       TY  +I+GLC+  K+  A+ L   +   G
Sbjct: 516 LIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKG 575

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQM-WLHNLEPTSATYNILIDGLCVNGDLKNA 537
           +  D + +N +I   C    + +A QLL++M   +N  P   TYN L+DG    G    A
Sbjct: 576 LQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKA 635

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             L +++ E+ +    ++Y T IK  C+     + +    +M+  G
Sbjct: 636 ASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASG 681



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 27/271 (9%)

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-----LEPSAVTYTTFMNAYCEEGNI 429
           +P + + N+L+  F +  + +DA     ++  HG     + P+  TY   + + C  G++
Sbjct: 117 NPGVRSHNALLDAFVRARRFSDADAFFASLS-HGAFGRRIAPNLQTYNIMLRSLCVRGDL 175

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
            R + L   +  + + P  +TY+ ++ G  K  +L  A+ LL++M    V PD + YN +
Sbjct: 176 DRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNAL 235

Query: 490 IRSFCKCKDLRKAFQLLNQMWLH-NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +    +  +  KA ++  Q+       P  ATYN+++DGLC  G  K A  +   +  +N
Sbjct: 236 LGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANN 295

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ 608
                + Y T+I   C   DV  A   + +M++                     G  PD 
Sbjct: 296 HQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK--------------------TGLVPDV 335

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
            I   +L  F   G +G  ++    M  SG+
Sbjct: 336 VIYNSLLKGFCHAGRVGEAWKFWDSMSVSGI 366



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 28/278 (10%)

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
           S ++V  ++       +  +A  RRL   +   G  P   ++   ++A+          A
Sbjct: 85  SAALVVLSAFSRALMPDAALAAFRRLPSFL---GCNPGVRSHNALLDAFVRARRFSDADA 141

Query: 435 LLQEMETKAIG----PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               +   A G    P   TY ++++ LC +  L  AV L + +   G+ PD+ITY+T++
Sbjct: 142 FFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLM 201

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL-QEHNI 549
             F K   L  A  LL++M  + ++P +  YN L+ G   NG+ + A  +   L ++   
Sbjct: 202 SGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGA 261

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
           S     Y  ++   C  G   +A   + +MV                    +N   PD  
Sbjct: 262 SPNLATYNVMLDGLCKLGMFKEAGDVWERMV--------------------ANNHQPDMI 301

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               M+    +  D+ S   + + MIK+GL+PD  + N
Sbjct: 302 TYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYN 339


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 153/604 (25%), Positives = 288/604 (47%), Gaps = 28/604 (4%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSR 107
           D + ++       ++ T SI+++ L    +L  A  +F +   GK   P V +  A++  
Sbjct: 161 DAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKA 220

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
            C+ G  + A  +   + + G+ P   +YN+L+  LC +G +EEA      M    V P 
Sbjct: 221 LCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPS 280

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            +T+ IL  G     Q      V+Q++   G  P+ V Y  +I  +C+ G+  E LKL +
Sbjct: 281 IVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFD 340

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI----RGL 283
            M+S+G K  V+ Y+++  ++CK G ++ A  +L EM   G+      ++ ++    RG 
Sbjct: 341 EMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGT 400

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
            + D V   ++L  EM ++ + PN     A +  LC+     EA   +  ++      +V
Sbjct: 401 GRLDLV---LRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNV 457

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
              N +I G  +  N+ EA ++ + ++   +    +T+N +I G CK  K+ +A +L D 
Sbjct: 458 ATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDD 517

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +   G +P   T+  F++ YC  G ++ +L LL +M+++ + P  VTY  +I G CK   
Sbjct: 518 MIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 577

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           + +A + L ++   G+ P+ + YN +I  + +  ++  A  +L+ M  + ++PT  TYN 
Sbjct: 578 MHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNS 637

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L+  +C  G ++    +       +I L  + YT II+  C  G + +A+ +F +     
Sbjct: 638 LMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKE----- 692

Query: 584 FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                          M S G PP++     ++ A+ + G+     +L   M+  G++PD 
Sbjct: 693 ---------------MHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDS 737

Query: 644 FLIN 647
              N
Sbjct: 738 VSYN 741



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 144/526 (27%), Positives = 269/526 (51%), Gaps = 4/526 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R G +  A  ++A+++   ++ ++ TYN L+  L      +  + L   +       ++ 
Sbjct: 223 RAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIV 282

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T  I+I GL +  +  +    LQE  G    P+ V  N ++  +C+ G    A  LF  M
Sbjct: 283 TFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEM 342

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD-AITYSILAKGFHLLSQ 183
           +  G+     +YN++   LC  G ME A +  ++M   G+    ++  S++A       +
Sbjct: 343 VSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGR 402

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +    ++I+++L +   P+    T  I   C+ G  EE  ++   +L +G  +NV   + 
Sbjct: 403 LDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNA 462

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +C+   + EA  +L  M   G++ D +TY+I+I+G CK  K+ +AIQL ++M  + 
Sbjct: 463 LIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRG 522

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+ F     L   C    + E     D +       D+V Y  +IDGY K  ++ +A 
Sbjct: 523 FKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKAN 582

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +   +L++  + P+ V +N+LI G+ +NG ++DA  +LDT+K +G++P+ VTY + M   
Sbjct: 583 EYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWM 642

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C  G ++ + A+  +   K I    + YT++I+G CK  K+ EAV   ++M+  G+ P++
Sbjct: 643 CHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNK 702

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +TY T++ ++ K  +  +A +L ++M    + P S +YN LI G C
Sbjct: 703 MTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFC 748



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 211/407 (51%)

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           NS+V   L    RL   +  ++E   +   P+   + A +   CK G  E A  ++  +L
Sbjct: 390 NSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVL 449

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             GL  +  + N LIHGLC   +M+EA +    M   GVE D ITY+I+ +G    S++ 
Sbjct: 450 GKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMD 509

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A ++   ++ +G  PD+ T+ + +  YC +G VEE L L + M S+G K +++ Y  ++
Sbjct: 510 EAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTII 569

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              CK+  + +A   L E+   GL+P+ V Y+ LI G  +   +  AI + + M    I 
Sbjct: 570 DGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQ 629

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P    + +++  +C   ++ E +  F   I+ +    V+ Y I+I G+ K+G I EAV  
Sbjct: 630 PTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMY 689

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           ++++  + I P+ +T+ +L++ + K+G   +A +L D +   G+ P +V+Y T ++ +CE
Sbjct: 690 FKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCE 749

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             ++ +++    EM ++ +     +Y   + G+   W  +EAV   E
Sbjct: 750 VDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPWCQKEAVSNAE 796



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 1/231 (0%)

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK-LHGLEPSAVT 415
           G++  A   + +L  +  SPSI T + L+      G++  AR++   ++    + P   T
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           YT  + A C  G I    A+L E+    I PT VTY V++  LCK  +++EA +L   M 
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
              V P  +T+  +I    + +   +   +L +M    + P    YN +I   C  G   
Sbjct: 274 EGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCS 333

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
            A  L   +    I  T V Y  I KA C EG++  A     +M+  G  +
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMV 384


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 216/395 (54%), Gaps = 6/395 (1%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
             + N ++   C  G    A  L   M +    P+A +YN +I G C  G ++ AL+   
Sbjct: 154 TTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMR 209

Query: 158 DMG-RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQ 215
           +M  R G+ P+  TY  +  G+  + ++  A KV  ++L KG   P+ V Y  LI GYC 
Sbjct: 210 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 269

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G ++  L  R+ M+ +G  + V  Y++L+ ++   GR  EA  L+ EM   GL  D+ T
Sbjct: 270 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFT 329

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ILI G CK+  V KA++++  M  + +      + +++  L +K  + E    FD  +
Sbjct: 330 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 389

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D+VLYN +I+ +   GNI  A ++  ++ +KRI+P  VT+N+L+ G C  G+V 
Sbjct: 390 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 449

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +AR+L+D +   G++P  VTY T ++ Y  +G+++  L +  EM  K   PT +TY  +I
Sbjct: 450 EARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 509

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           +GLCK  +  +A  ++++M   G+TPD  TY ++I
Sbjct: 510 QGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 544



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 218/454 (48%), Gaps = 41/454 (9%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  M +  L     ++NI++  LC AG    ALE    M R               
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR--------------- 182

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LREVMLSQGFK 235
                                   P+ VTY  +I G+C  G V+  L  +RE+    G  
Sbjct: 183 ------------------------PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIA 218

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG-LKPDLVTYSILIRGLCKQDKVHKAIQ 294
            N   Y  ++S  CK GR+DEA+ +  EM   G +KP+ V Y+ LI G C Q K+  A+ 
Sbjct: 219 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 278

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
             + M  + ++     +  ++  L      TEA    + +       DV  YNI+I+G+ 
Sbjct: 279 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHC 338

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K GN+ +A++++  +  + +  ++VT+ SLIY   K G+V +  +L D     G+ P  V
Sbjct: 339 KEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV 398

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            Y   +N++   GNI R   ++ EME K I P  VTY  +++GLC   ++ EA +L+++M
Sbjct: 399 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 458

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+ PD +TYNT+I  +    D++ A ++ N+M      PT  TYN LI GLC NG  
Sbjct: 459 TKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 518

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
            +A+ ++  + E+ I+     Y ++I+    E +
Sbjct: 519 DDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 220/416 (52%), Gaps = 7/416 (1%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           A  + A M  L L +   T+N +L +L          + ++    P N  T + VI G C
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRP-NAVTYNTVIAGFC 196

Query: 75  QQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LH 130
            + R+Q A+  ++E   +E G   P+  +   ++S +CK+G  + A  +F  ML  G + 
Sbjct: 197 SRGRVQAALDIMREM--RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK 254

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+A  YN LI G C  G ++ AL + + M   GV     TY++L     +  + + A+++
Sbjct: 255 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 314

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++++  KG   D+ TY +LI G+C+ GNV++ L++ E M  +G +  V+ Y+ L+ ++ K
Sbjct: 315 VEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSK 374

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G++ E   L  E    G++PDLV Y+ LI        + +A ++  EM  KRI+P+   
Sbjct: 375 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 434

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ GLC    + EAR   D +       D+V YN +I GY   G++ +A+++  +++
Sbjct: 435 YNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 494

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            K  +P+++T+N+LI G CKNG+  DA  ++  +  +G+ P   TY + +     E
Sbjct: 495 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 550



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 204/385 (52%), Gaps = 23/385 (5%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++++L  +C +G+   AL LL +M     +P+ VTY+ +I G C + +V  A+ +  EM 
Sbjct: 157 FNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMR 212

Query: 301 SKR-ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGN 358
            +  I+PN + +G ++ G C+   + EA   FD ++    ++ + V+YN +I GY   G 
Sbjct: 213 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 272

Query: 359 IGEAVQLYR-QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           +  A+ LYR +++E+ ++ ++ T+N L++    +G+  +A  L++ +   GL     TY 
Sbjct: 273 LDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYN 331

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N +C+EGN+++ L + + M  + +  T VTYT +I  L K+ ++QE  +L ++    
Sbjct: 332 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 391

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD + YN +I S     ++ +AF+++ +M    + P   TYN L+ GLC+ G +  A
Sbjct: 392 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 451

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY------ 591
             L+  + +  I    V Y T+I  +  +GDV  A+    +M+ KGF  ++  Y      
Sbjct: 452 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 511

Query: 592 ---------TKSFFCMMLSNGFPPD 607
                     ++    M+ NG  PD
Sbjct: 512 LCKNGQGDDAENMVKEMVENGITPD 536



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 189/383 (49%), Gaps = 6/383 (1%)

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
            T+ +++   C  G     L+L    L Q  + N + Y+ +++  C  GR+  AL ++ E
Sbjct: 155 TTFNIMLRHLCSAGKPARALEL----LRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMRE 210

Query: 264 M-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK-RISPNSFAHGAILLGLCEK 321
           M E  G+ P+  TY  +I G CK  +V +A+++++EM +K  + P +  + A++ G C++
Sbjct: 211 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 270

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             +  A +Y D ++       V  YN+++      G   EA +L  ++  K ++  + T+
Sbjct: 271 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTY 330

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N LI G CK G V  A  + + +   G+  + VTYT+ + A  ++G +Q    L  E   
Sbjct: 331 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 390

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           + I P  V Y  +I        +  A +++ +M    + PD +TYNT++R  C    + +
Sbjct: 391 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 450

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A +L+++M    ++P   TYN LI G  + GD+K+A  +   +     + T + Y  +I+
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 510

Query: 562 AHCAEGDVHKAMTFFCQMVEKGF 584
             C  G    A     +MVE G 
Sbjct: 511 GLCKNGQGDDAENMVKEMVENGI 533



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 160/287 (55%), Gaps = 5/287 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y   G +  A+    +M E  + +++ TYN L++ L    R T+  ++L +++       
Sbjct: 267 YCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA-YELVEEMGGKGLAL 325

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+T +I+I+G C++  ++ A+   +  + +    +VV+  +++    K G  +    LF
Sbjct: 326 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 385

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              ++ G+ PD   YN LI+    +G+++ A E   +M +  + PD +TY+ L +G  LL
Sbjct: 386 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 445

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A K+I ++  +G  PD+VTY  LI GY   G+V++ L++R  M+++GF   ++ Y
Sbjct: 446 GRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 505

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           + L+  +CK+G+ D+A  ++ EM   G+ PD  TY  LI GL  +D+
Sbjct: 506 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 135/303 (44%), Gaps = 21/303 (6%)

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+  +   R+     TFN ++   C  GK A A  LL  +      P+AVTY T + 
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 193

Query: 422 AYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-V 479
            +C  G +Q  L +++EM E   I P   TY  VI G CK  ++ EAV++ ++M   G V
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+ + YN +I  +C    L  A    ++M    +  T ATYN+L+  L ++G    A  
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------ 593
           L+  +    ++L    Y  +I  HC EG+V KA+  F  M  +G   ++  YT       
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373

Query: 594 ---------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                      F   +  G  PD  +   ++ +    G++   FE+   M K  + PD  
Sbjct: 374 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 433

Query: 645 LIN 647
             N
Sbjct: 434 TYN 436



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/421 (22%), Positives = 188/421 (44%), Gaps = 30/421 (7%)

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           L+L   M S    ++  +   LLS++  +     A  L  +M  + L     T++I++R 
Sbjct: 108 LRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRH 163

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-Q 341
           LC   K  +A++L  +M      PN+  +  ++ G C +  +  A      +     I  
Sbjct: 164 LCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 219

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRL 400
           +   Y  +I G+ K+G + EAV+++ +++ K  + P  V +N+LI G+C  GK+  A   
Sbjct: 220 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 279

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            D +   G+  +  TY   ++A   +G       L++EM  K +     TY ++I G CK
Sbjct: 280 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCK 339

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
           +  +++A+++ E+M   GV    +TY ++I +  K   +++  +L ++     + P    
Sbjct: 340 EGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 399

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           YN LI+    +G++  A  ++  +++  I+   V Y T+++  C  G V +A     +M 
Sbjct: 400 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 459

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           ++G                      PD      ++  +   GD+     +   M+  G  
Sbjct: 460 KRG--------------------IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 499

Query: 641 P 641
           P
Sbjct: 500 P 500



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 132/260 (50%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T ++++  L    R  +A   ++E  GK     V + N +++ +CK G  + A  +F 
Sbjct: 292 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFE 351

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + G+     +Y  LI+ L   G ++E  +  ++  R G+ PD + Y+ L        
Sbjct: 352 NMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 411

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            I  A++++ ++  K   PD VTY  L+ G C +G V+E  KL + M  +G + +++ Y+
Sbjct: 412 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYN 471

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+S     G + +AL +  EM   G  P L+TY+ LI+GLCK  +   A  +  EM   
Sbjct: 472 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 531

Query: 303 RISPNSFAHGAILLGLCEKE 322
            I+P+   + +++ GL  ++
Sbjct: 532 GITPDDSTYISLIEGLTTED 551


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 178/677 (26%), Positives = 308/677 (45%), Gaps = 41/677 (6%)

Query: 7   SRTGMV--HDAVFVIAKMKELDLKVSIQTYNSLLYNLRH------TDIMWDLYD----DI 54
           +R+G +   DA+ +  +M       S++T+N LL  +        ++++  L++    + 
Sbjct: 25  ARSGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIREC 84

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQD--AILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
            V   P +  T +I+I   C+  RL+   A   L    G     +V+    ++   C   
Sbjct: 85  SVKVAPSSC-TYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVI-FGQLLKGLCDAK 142

Query: 113 FAEVAKG-LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV---EPDA 168
             + A   L   M ++G   +  SYNIL+ GLC     EEALE  + M   G     P+ 
Sbjct: 143 RVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNV 202

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +TY+ +  G      +  A  V Q ++ KG  P+  TYT LI GY   G  +E +++ + 
Sbjct: 203 VTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQE 262

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M + G + + + Y+VLL  +CK+GR  EA  +   +   G+KP +  Y IL+ G   +  
Sbjct: 263 MSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGA 322

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + +     + M    +SP+      +     +K MI EA   FD +        VV Y  
Sbjct: 323 LSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGA 382

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +ID   KLG + +AV  + Q+I + ++P I  F+SL+YG C   K   A +L   +   G
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQG 442

Query: 409 LEPSAVTYTTFMNAYCEEGNI---QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           +  +A  +   M   C EG +   QRL+ L+  ++ +   P  ++Y  ++ G C   ++ 
Sbjct: 443 IRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVR---PDVISYNTLVDGHCLTGRID 499

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA +LL+ M  IG+ PD+ TYNT++  +CK + +  A+ L  +M +  L P   TYN ++
Sbjct: 500 EAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTIL 559

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            GL   G    A  L +++  +        YT I+   C    V +A   F  +  K  +
Sbjct: 560 HGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQ 619

Query: 586 ISI---------------RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
           + I               ++     F  + + G  PD E   ++     + G L  + EL
Sbjct: 620 LDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDEL 679

Query: 631 AAVMIKSGLLPDKFLIN 647
            + M ++G  P+  ++N
Sbjct: 680 FSAMEENGTAPNSRMLN 696



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/563 (24%), Positives = 263/563 (46%), Gaps = 38/563 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAK 118
           NV + +I++ GLC + R ++A+  +   A    G   P+VV+   ++   CK    + AK
Sbjct: 163 NVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAK 222

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
           G+F  M+  G+ P+  +Y  LIHG    G  +E ++   +M  HG++PD + Y++L    
Sbjct: 223 GVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYL 282

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               + + A  +   L+ KG  P +  Y +L+ GY   G + E     ++M+  G   + 
Sbjct: 283 CKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDH 342

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             ++++ ++  K   IDEA+ +  +M    L P +V Y  LI  LCK  +V  A+  +N+
Sbjct: 343 HIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQ 402

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M ++ ++P+ F   +++ GLC  +   +A   F  ++      +   +NI++    + G 
Sbjct: 403 MINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGR 462

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EA +L   ++   + P ++++N+L+ G C  G++ +A +LLD +   GL+P   TY T
Sbjct: 463 VMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNT 522

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY--------------------------- 451
            ++ YC+   I    +L +EM  K + P  VTY                           
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNR 582

Query: 452 --------TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
                   T+++ GLC+   + EA ++ + +    +  D  T N +I +  K      A 
Sbjct: 583 RKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAM 642

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L   +  + L P   TY ++ + L   G L+  D L  +++E+  +        +++  
Sbjct: 643 DLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWL 702

Query: 564 CAEGDVHKAMTFFCQMVEKGFEI 586
              GD+ +A  +  ++ EK F +
Sbjct: 703 LHRGDIGRAGVYLSKLDEKNFSL 725



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/585 (23%), Positives = 257/585 (43%), Gaps = 78/585 (13%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           ++ +M E    +++ +YN LL  L          ++M  + DD   S TP NV T + VI
Sbjct: 151 LLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTP-NVVTYTTVI 209

Query: 71  DGLCQ-----------------------------------QSRLQDAILFLQETAGKEFG 95
           DGLC+                                     + ++ +  LQE +     
Sbjct: 210 DGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQ 269

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P  V    ++   CK G    A+ +F  +++ G+ P    Y IL+HG    G++ E   F
Sbjct: 270 PDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSF 329

Query: 156 TNDMGRHGVEPDAITYSILAKGF----------HLLSQISGAW----------------- 188
            + M R+GV PD   ++I+   +          H+  ++   W                 
Sbjct: 330 LDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCK 389

Query: 189 --KV------IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +V        +++ +G  PDI  ++ L+ G C +   E+  KL   +L QG +LN   
Sbjct: 390 LGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAF 449

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           +++L+ ++C+ GR+ EA  L+  M  V ++PD+++Y+ L+ G C   ++ +A +L + M 
Sbjct: 450 FNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMV 509

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           S  + P+ F +  +L G C+   I +A   F  ++M      VV YN ++ G  ++G   
Sbjct: 510 SIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFC 569

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA +LY  +I  R    I T+  ++ G C+N  V +A ++  ++    L+    T    +
Sbjct: 570 EAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMI 629

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
            A  + G  +  + L   +    + P   TY ++ + L K+  L+E  +L   M   G  
Sbjct: 630 GALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTA 689

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           P+    N ++R      D+ +A   L+++   N    ++T ++LI
Sbjct: 690 PNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLI 734



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 181/389 (46%), Gaps = 1/389 (0%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           ++D ++       V     +ID LC+  R+ DA+L   +   +   P +   ++++   C
Sbjct: 364 IFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLC 423

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
            +   E A+ LF  +L  G+  +A  +NIL+  LC  G + EA    + M R  V PD I
Sbjct: 424 TVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVI 483

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+ L  G  L  +I  A K++  ++  G  PD  TY  L+ GYC+   +++   L   M
Sbjct: 484 SYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREM 543

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           L +G    V+ Y+ +L  + + GR  EA  L   M     K D+ TY+I++ GLC+ + V
Sbjct: 544 LMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFV 603

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A +++  +CSK +  + F    ++  L +     +A   F ++     + DV  Y ++
Sbjct: 604 DEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLI 663

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
            +  +K G++ E  +L+  + E   +P+    N+L+      G +  A   L  +     
Sbjct: 664 AENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNF 723

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
              A T +  ++ Y      Q+L   L E
Sbjct: 724 SLEASTTSMLISIY-SRAEYQQLAKSLPE 751



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 180/373 (48%), Gaps = 9/373 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + G V DAV    +M    +   I  ++SL+Y L   D  W+  + +      + +  N+
Sbjct: 389 KLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVD-KWEKAEKLFFEVLDQGIRLNA 447

Query: 68  ----IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
               I++  LC++ R+ +A   +      +  P V+S N ++  +C  G  + A  L  +
Sbjct: 448 AFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDV 507

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  GL PD F+YN L+HG C A  +++A     +M   G+ P  +TY+ +  G   + +
Sbjct: 508 MVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGR 567

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A ++   ++      DI TYT+++ G C+   V+E  K+ + + S+  +L++   ++
Sbjct: 568 FCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINI 627

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ ++ K GR ++A+ L   + A GL PD+ TY ++   L K+  + +  +L++ M    
Sbjct: 628 MIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENG 687

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +PNS    A++  L  +  I  A +Y   L   N   +    +++I  Y +     E  
Sbjct: 688 TAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSR----AEYQ 743

Query: 364 QLYRQLIEKRISP 376
           QL + L EK   P
Sbjct: 744 QLAKSLPEKYRFP 756



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 3/213 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y +   + DA  +  +M    L   + TYN++L+ L       +   LY ++  +    +
Sbjct: 527 YCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCD 586

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           +YT +I+++GLC+ + + +A    Q    K+    + ++N ++    K G  E A  LF 
Sbjct: 587 IYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFA 646

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +  YGL PD  +Y ++   L   GS+EE  E  + M  +G  P++   + L +      
Sbjct: 647 TISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRG 706

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            I  A   + KL  K    +  T ++LI  Y +
Sbjct: 707 DIGRAGVYLSKLDEKNFSLEASTTSMLISIYSR 739


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 220/391 (56%), Gaps = 4/391 (1%)

Query: 152 ALEFT-NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            +EF   +M R  + P+ IT++ +  G   + +++ A  V+  + + G  P++VTY  LI
Sbjct: 213 GVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLI 272

Query: 211 CGYCQIGNVEEGLKLREV---MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            GYC++G V +  K   +   M+      N + ++VL+   CK   +  AL +  EM++ 
Sbjct: 273 DGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQ 332

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GLKP +VTY+ L+ GLC + K+++A  L +EM S  + PN   + A++ G C+K+++ EA
Sbjct: 333 GLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEA 392

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           R  FD++       +V+ +N ++ GY K G + EA  L + ++EK   P+  T+N LI G
Sbjct: 393 RELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVG 452

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           FC+ GK+ + + LL+ ++  G++   VTY   ++A+CE+   ++   L+ EM  K + P+
Sbjct: 453 FCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPS 512

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
           H+TY +++ G C +  L+ A+ L + M   G   + +TYN +I+ +C+   L  A  LLN
Sbjct: 513 HLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLN 572

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           +M    L P   TY I+ + +   G L + +
Sbjct: 573 EMLEKGLIPNRTTYEIIKEEMMEKGFLPDIE 603



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 213/384 (55%), Gaps = 4/384 (1%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M+ +    N+I ++ +++ +CK G++++A  ++ +M+  G  P++VTY+ LI G CK  +
Sbjct: 221 MIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGR 280

Query: 289 V---HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
           V   +KA  +  EM   ++SPNS     ++ G C+ E ++ A   F+ +        VV 
Sbjct: 281 VGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVT 340

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN +++G    G + EA  L  +++   + P+++T+N+LI G+CK   + +AR L D I 
Sbjct: 341 YNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             GL P+ +T+ T ++ YC+ G ++    L + M  K   P   TY  +I G C++ K++
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKME 460

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           E   LL +M   GV  D +TYN +I ++C+ K+ +KA +L+++M    L+P+  TYNIL+
Sbjct: 461 EVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILL 520

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           +G C+ G+L+ A  L   +++       V Y  +I+ +C +G +  A     +M+EKG  
Sbjct: 521 NGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGL- 579

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQE 609
           I  R   +     M+  GF PD E
Sbjct: 580 IPNRTTYEIIKEEMMEKGFLPDIE 603



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 209/419 (49%), Gaps = 45/419 (10%)

Query: 17  FVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGL 73
           FV  +M    +  ++ T+N+++  L      +   D+ DD+KV     NV T + +IDG 
Sbjct: 216 FVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGY 275

Query: 74  CQQSRL-----QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           C+  R+      DAI  L+E    +  P+ V+ N ++  +CK      A  +F  M   G
Sbjct: 276 CKMGRVGKMYKADAI--LKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQG 333

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           L P   +YN L++GLC  G + EA    ++M    ++P+ ITY+ L  G+     +  A 
Sbjct: 334 LKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEAR 393

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++   +  +G  P+++T+  L+ GYC+ G +EE   L++VML +GF  N   Y+ L+   
Sbjct: 394 ELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGF 453

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C+ G+++E   LL EM+  G+K D VTY+ILI   C++ +  KA +L +EM  K + P+ 
Sbjct: 454 CREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSH 513

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
                                                YNI+++GY   GN+  A+ L +Q
Sbjct: 514 LT-----------------------------------YNILLNGYCMEGNLRAALNLRKQ 538

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           + ++    ++VT+N LI G+C+ GK+ DA  LL+ +   GL P+  TY        E+G
Sbjct: 539 MEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 198/383 (51%), Gaps = 18/383 (4%)

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           L+  L K+++      +Y EM  ++ISPN      ++ GLC+   + +A    D + +  
Sbjct: 201 LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWG 260

Query: 339 CIQDVVLYNIMIDGYVKLGNIG---EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              +VV YN +IDGY K+G +G   +A  + ++++E ++SP+ VTFN LI GFCK+  ++
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLS 320

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A ++ + ++  GL+P+ VTY + +N  C EG +     LL EM +  + P  +TY  +I
Sbjct: 321 AALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALI 380

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G CK+  L+EA +L +++   G+TP+ IT+NT++  +CK   + +AF L   M      
Sbjct: 381 NGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFL 440

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P ++TYN LI G C  G ++    LL  +Q   +    V Y  +I A C + +  KA   
Sbjct: 441 PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARL 500

Query: 576 FCQMVEKGFEISIRDYT--KSFFCM-------------MLSNGFPPDQEICEVMLIAFHQ 620
             +M++KG + S   Y    + +CM             M   G   +     V++  + +
Sbjct: 501 IDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCR 560

Query: 621 GGDLGSVFELAAVMIKSGLLPDK 643
            G L     L   M++ GL+P++
Sbjct: 561 KGKLEDANGLLNEMLEKGLIPNR 583



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 195/389 (50%), Gaps = 3/389 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++  L +++         +E   ++  P++++ N +++  CK+G    A  +   M  +G
Sbjct: 201 LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWG 260

Query: 129 LHPDAFSYNILIHGLCI---AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             P+  +YN LI G C     G M +A     +M  + V P+++T+++L  GF     +S
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLS 320

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A KV +++  +G  P +VTY  L+ G C  G + E   L + MLS   K NVI Y+ L+
Sbjct: 321 AALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALI 380

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           +  CK   ++EA  L   +   GL P+++T++ L+ G CK  K+ +A  L   M  K   
Sbjct: 381 NGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFL 440

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN+  +  +++G C +  + E +   + +       D V YNI+I  + +     +A +L
Sbjct: 441 PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARL 500

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++++K + PS +T+N L+ G+C  G +  A  L   ++  G   + VTY   +  YC 
Sbjct: 501 IDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCR 560

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVV 454
           +G ++    LL EM  K + P   TY ++
Sbjct: 561 KGKLEDANGLLNEMLEKGLIPNRTTYEII 589



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 170/331 (51%), Gaps = 5/331 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R G ++ A  ++ +M E  +  +  T+N L+       +      ++++++       V 
Sbjct: 280 RVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVV 339

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +++GLC + +L +A + L E       P+V++ NA+++ YCK    E A+ LF  +
Sbjct: 340 TYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNI 399

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K GL P+  ++N L+HG C  G MEEA      M   G  P+A TY+ L  GF    ++
Sbjct: 400 GKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKM 459

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
                ++ ++  +G   D VTY +LI  +C+    ++  +L + ML +G K + + Y++L
Sbjct: 460 EEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNIL 519

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L+  C  G +  AL L  +ME  G   ++VTY++LI+G C++ K+  A  L NEM  K +
Sbjct: 520 LNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGL 579

Query: 305 SPNSFAHGAILLGLCEKEMIT--EARMYFDS 333
            PN   +  I   + EK  +   E  +Y  S
Sbjct: 580 IPNRTTYEIIKEEMMEKGFLPDIEGHLYHAS 610



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 158/319 (49%), Gaps = 18/319 (5%)

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N ++   VK    G    +Y+++I ++ISP+++TFN++I G CK GK+  A  ++D +K+
Sbjct: 199 NPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKV 258

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLL---ALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
            G  P+ VTY T ++ YC+ G + ++    A+L+EM    + P  VT+ V+I G CK   
Sbjct: 259 WGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDEN 318

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           L  A+++ E+M   G+ P  +TYN+++   C    L +A  LL++M   NL+P   TYN 
Sbjct: 319 LSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNA 378

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           LI+G C    L+ A  L  ++ +  ++   + + T++  +C  G + +A      M+EKG
Sbjct: 379 LINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKG 438

Query: 584 FEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
           F  +   Y                K+    M   G   D     +++ A+ +  +     
Sbjct: 439 FLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAA 498

Query: 629 ELAAVMIKSGLLPDKFLIN 647
            L   M+  GL P     N
Sbjct: 499 RLIDEMLDKGLKPSHLTYN 517


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 268/544 (49%), Gaps = 2/544 (0%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P +V + + VI+GL ++ +L  A     E   +   P+ ++ N ++  YC  G  + A G
Sbjct: 203 PPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIG 262

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F  M + G+ PD  +YN L+  LC  G   EA +  + M + G +PD+  Y  L  G+ 
Sbjct: 263 IFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYA 322

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               +    +++  ++  G+ PD   + +LI  Y + G V+E +     M  QG   N++
Sbjct: 323 TEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIV 382

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y  ++ ++C+ G++D+A+     + + GL P+ V +  LI GLC  DK  KA +L  EM
Sbjct: 383 TYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEM 442

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             + I PN+     +L  LC++ M+T A+  FD ++  +   DV+ Y  +IDGY   G +
Sbjct: 443 IGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKV 502

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA +L   ++   + P+ VT+N++I G+CKNG++ DA  L   +   G+ P  V Y+T 
Sbjct: 503 DEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTI 562

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++   +   I     L   M    I     TY ++++GLC+     +A+++  ++ +I  
Sbjct: 563 LHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDF 622

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
                T+N +I +  K     +A  L   +    L P   TY +++  L   G L+  D 
Sbjct: 623 HLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDD 682

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           L +SL+++  +        ++     +G+V KA  +  ++ E  F  S+   T      +
Sbjct: 683 LFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNF--SLEASTAESLVFL 740

Query: 600 LSNG 603
           +S+G
Sbjct: 741 VSSG 744



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 243/501 (48%), Gaps = 10/501 (1%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           S+  LN+ +S   +   A VA  LF  M +     D  +Y+I+I     AG ++ A    
Sbjct: 65  SIFDLNSALSAVARESPA-VALSLFNRMPR----ADLCTYSIVIGCCSRAGHLDLAFAAL 119

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV-IQKLLIKGSDPDIVTYTVLICGYCQ 215
             + R G    AIT+S L KG     + S A  + ++++   G  P+  +Y +L+ G C 
Sbjct: 120 GRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCD 179

Query: 216 IGNVEEGLKLREVMLSQ----GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
               ++ L L   M++     G   +V++Y+ +++ + + G++D+A  L  EM   G+ P
Sbjct: 180 ENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSP 239

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           + +TY+ L+ G C   K  +AI ++ +MC   + P+   +  +++ LC+     EAR  F
Sbjct: 240 NCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVF 299

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           DS++      D  +Y  ++ GY   G + +  QL   ++     P    FN LI  + K+
Sbjct: 300 DSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKH 359

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G V +A      ++  GL P+ VTY T M+A C  G +   ++    + ++ + P  V +
Sbjct: 360 GMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVF 419

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             +I GLC   K  +A +L  +M   G+ P+ I +NT++   CK   + +A  + + M  
Sbjct: 420 RTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVR 479

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
            +++    TY  LIDG C++G +  A  LL  +    +   +V Y TII  +C  G +  
Sbjct: 480 VDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIED 539

Query: 572 AMTFFCQMVEKGFEISIRDYT 592
           A + F QM  KG    I  Y+
Sbjct: 540 ACSLFRQMASKGVNPGIVIYS 560



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 154/588 (26%), Positives = 267/588 (45%), Gaps = 25/588 (4%)

Query: 65  TNSIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           T S ++ GLC   R  DA+ + L+        P+  S N ++   C    ++ A  L   
Sbjct: 133 TFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHT 192

Query: 124 ML----KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           M+    + G  PD  SY  +I+GL   G +++A    ++M   G+ P+ ITY+ L  G+ 
Sbjct: 193 MMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYC 252

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +   A  + +K+   G +PD+VTY  L+   C+ G   E  K+ + M+ +G K +  
Sbjct: 253 SSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSS 312

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y  LL      G + +   LL  M   G +PD   ++ILI    K   V +A+  +++M
Sbjct: 313 IYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKM 372

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             + + PN   +G ++  LC    + +A   FD LI      + V++  +I G       
Sbjct: 373 RQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKW 432

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A +L  ++I + I P+ + FN+L+   CK G V  A+ + D +    ++   +TYTT 
Sbjct: 433 DKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTL 492

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ YC +G +     LL+ M    + P  VTY  +I G CK  ++++A  L   M   GV
Sbjct: 493 IDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGV 552

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P  + Y+TI+    + + +  A +L   M    ++    TYNI++ GLC N    +A  
Sbjct: 553 NPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALR 612

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           +      HN+ L                D H     F  M++   +    D  K  F  +
Sbjct: 613 MF-----HNLCLI---------------DFHLQNRTFNIMIDALLKGGRHDEAKDLFASL 652

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           L+ G  P+     +M+ +  + G L  + +L   + K+G   D  ++N
Sbjct: 653 LARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLN 700



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 186/390 (47%), Gaps = 5/390 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y++ GMV +A+   +KM++  L  +I TY +++  L    +  D M      I  
Sbjct: 351 ILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISE 410

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
             TP  V   ++ I GLC   +   A     E  G+   P+ +  N +++  CK G    
Sbjct: 411 GLTPNGVVFRTL-IHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTR 469

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           AK +F LM++  +  D  +Y  LI G C+ G ++EA +    M   GV+P+ +TY+ +  
Sbjct: 470 AKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIIN 529

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+    +I  A  + +++  KG +P IV Y+ ++ G  Q   +    +L   M+  G KL
Sbjct: 530 GYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKL 589

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +  Y+++L  +C++   D+AL + + +  +       T++I+I  L K  +  +A  L+
Sbjct: 590 PIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLF 649

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             + ++ + PN   +  ++  L E+ ++ E    F SL  + C  D  + N ++    + 
Sbjct: 650 ASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQK 709

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           G + +A     ++ E   S    T  SL++
Sbjct: 710 GEVRKAGVYLSKIDENNFSLEASTAESLVF 739


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 232/464 (50%), Gaps = 15/464 (3%)

Query: 121 FCLMLKYGLHPDAFSYN-ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           F  M +    P    +N IL + +         L  +  M   GV+PD  T SIL   + 
Sbjct: 54  FNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYC 113

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
            L Q++ A+ V  K              +L  G C  G V E L   + +L+ GF LN +
Sbjct: 114 HLGQMTFAFSVFAK--------------ILKMGLCLNGKVNEALLFHDHVLALGFHLNHV 159

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y +L++ +CK G+   AL +L ++E   +  ++V YS +I GLCK   V  A  LY+EM
Sbjct: 160 TYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEM 219

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             KRI P      +++ G C      +A   F+ ++M N   D   +NI++D   K G I
Sbjct: 220 IVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKI 279

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA  +   ++++ + P++VT+N+L+ G+C   +V  A+ +L  I    + P++ +Y   
Sbjct: 280 KEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIM 339

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N +C+   +   L L  EM  + I P  VTY  +I GLCK  ++  A +L+++M+   +
Sbjct: 340 INGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCI 399

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             D +TYN++I  FCK + + KA  L+ ++  H ++P   TYNILIDGLC  G LKNA  
Sbjct: 400 PADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQD 459

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +   L     ++    Y  +I   C EG   +A     +M + G
Sbjct: 460 VFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNG 503



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 238/476 (50%), Gaps = 21/476 (4%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-- 112
           ++ +TP  V  N I+   +  ++     +    +   K   P + +L+ +++ YC LG  
Sbjct: 59  QIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQM 118

Query: 113 ------FAEVAKGLFCL-------------MLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
                 FA++ K   CL             +L  G H +  +Y ILI+GLC  G    AL
Sbjct: 119 TFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAAL 178

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           +    +    V  + + YS +  G      ++ A+ +  ++++K   P +VT++ LI G+
Sbjct: 179 QVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGF 238

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C +G  ++  +L   M+ +    +   +++L+ ++CK G+I EA  ++  M   G++P +
Sbjct: 239 CIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTV 298

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VTY+ L+ G C  ++V KA  + + +   R++PNS ++  ++ G C+ +M+ EA   F  
Sbjct: 299 VTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHE 358

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +         V YN +IDG  K G I  A +L  ++    I   IVT+NSLI  FCKN  
Sbjct: 359 MCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQH 418

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V  A  L+  IK HG++P+  TY   ++  C+ G ++    + Q++  K       TY +
Sbjct: 419 VDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNI 478

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           +I GLCK+    EA  LL  M   G+ PD +TY TII++     +  KA +LL +M
Sbjct: 479 MINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREM 534



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 249/495 (50%), Gaps = 27/495 (5%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTN 66
           +V +AV    +M+++    SI  +N +L  L     H   +  L   ++      +++T 
Sbjct: 46  VVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTL 105

Query: 67  SIVID---------------------GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIM 105
           SI+I+                     GLC   ++ +A+LF        F  + V+   ++
Sbjct: 106 SILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILI 165

Query: 106 SRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE 165
           +  CK+G    A  +   +    ++ +   Y+ +I GLC    + +A    ++M    + 
Sbjct: 166 NGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIP 225

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           P  +T+S L  GF ++ +   A+++  ++++K  +PD  T+ +L+   C+ G ++E   +
Sbjct: 226 PTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNV 285

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
             VM+ +G +  V+ Y+ L+   C    + +A  +L  +  + + P+  +Y+I+I G CK
Sbjct: 286 IAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCK 345

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVV 344
              V +A+ L++EMC + I+P+   + +++ GLC+   I  A    D +  +NCI  D+V
Sbjct: 346 IKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEM-HNNCIPADIV 404

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            YN +ID + K  ++ +A+ L +++ E  I P++ T+N LI G CK G++ +A+ +   +
Sbjct: 405 TYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDL 464

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
            + G   +A TY   +N  C+EG       LL +ME   I P  VTY  +I+ L  + + 
Sbjct: 465 LIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDEN 524

Query: 465 QEAVQLLEDMYVIGV 479
           ++A +LL +M + GV
Sbjct: 525 EKAQKLLREMVIKGV 539



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 180/344 (52%), Gaps = 9/344 (2%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTN 66
           +V DA  + ++M    +  ++ T++SL+Y      +  D  + L++++ +     + YT 
Sbjct: 208 LVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKD-AFRLFNEMVMKNINPDAYTF 266

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I++D LC++ ++++A   +     +   P+VV+ N +M  YC +     AK +  ++ +
Sbjct: 267 NILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISR 326

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + P++ SYNI+I+G C    ++EAL   ++M   G+ P  +TY+ L  G     +I  
Sbjct: 327 MRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPY 386

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           AW+++ ++       DIVTY  LI  +C+  +V++ + L + +   G + N+  Y++L+ 
Sbjct: 387 AWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILID 446

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CK G++  A  +  ++   G   +  TY+I+I GLCK+    +A  L ++M    I P
Sbjct: 447 GLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIP 506

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           ++  +  I+  L  K+   +A+     ++    I+ VV+Y   I
Sbjct: 507 DAVTYETIIQALFHKDENEKAQKLLREMV----IKGVVVYAFEI 546



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 148/310 (47%), Gaps = 32/310 (10%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + G + +A  VIA M +  ++ ++ TYN+L+                             
Sbjct: 275 KEGKIKEAKNVIAVMMKEGVEPTVVTYNTLM----------------------------- 305

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
              DG C  + +  A   L   +     P+  S N +++ +CK+   + A  LF  M   
Sbjct: 306 ---DGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCR 362

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+ P   +YN LI GLC AG +  A E  ++M  + +  D +TY+ L   F     +  A
Sbjct: 363 GIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKA 422

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             +++K+   G  P++ TY +LI G C+ G ++    + + +L +G+ +N   Y+++++ 
Sbjct: 423 IALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMING 482

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK G  DEA  LL +ME  G+ PD VTY  +I+ L  +D+  KA +L  EM  K +   
Sbjct: 483 LCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVY 542

Query: 308 SFAHGAILLG 317
           +F     L+G
Sbjct: 543 AFEIRRTLVG 552



 Score = 46.6 bits (109), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 61/298 (20%), Positives = 105/298 (35%), Gaps = 74/298 (24%)

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT-IKLHGL 409
           +G+V    +  AV  + ++ + R +PSIV FN ++    K          L T ++  G+
Sbjct: 43  NGFV----VDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGV 98

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           +P   T +  +N YC  G +    ++  +              ++  GLC   K+ EA+ 
Sbjct: 99  KPDLFTLSILINCYCHLGQMTFAFSVFAK--------------ILKMGLCLNGKVNEALL 144

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
             + +  +G                        F L              TY ILI+GLC
Sbjct: 145 FHDHVLALG------------------------FHL-----------NHVTYGILINGLC 169

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             G  + A  +L  ++   ++   V Y+TII   C +  V  A   + +M+ K       
Sbjct: 170 KMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRI----- 224

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                          PP       ++  F   G     F L   M+   + PD +  N
Sbjct: 225 ---------------PPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFN 267


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 263/520 (50%), Gaps = 1/520 (0%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + VI    +     +A+    E        +V    +++  YC  G    A  LF  +
Sbjct: 294 TYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEV 353

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G+ P+   +++LI      G++E+A E    M   G++P     + L KGF   + +
Sbjct: 354 VEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLL 413

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A+ ++   +  G    +VTY +++   C++G V E   L + M+ +G   ++++Y+ +
Sbjct: 414 ENAYLLLDGAVENGI-ASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHM 472

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   CK G +D+A  ++  +   GLKP+ +TY+IL+ G  K+     A  ++++M +  I
Sbjct: 473 ILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGI 532

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P  +   +I+ GLC+   ++EAR   ++ I  + I   + YN +IDGYVK G I  A  
Sbjct: 533 VPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAES 592

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +YR++    ISP+++T+ SLI GFCK+ K+  A ++ D +K  GLE     Y T +  +C
Sbjct: 593 VYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFC 652

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +  +++       ++    + P  + Y ++I        ++ A+ L ++M    +  D  
Sbjct: 653 KMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLK 712

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y ++I    K   L  A  L ++M    + P    YN+LI+GLC +G L+NA  +L  +
Sbjct: 713 IYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEM 772

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             +NI+ T + Y T+I  H  EG++ +A     +M++KG 
Sbjct: 773 DGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGL 812



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 161/600 (26%), Positives = 276/600 (46%), Gaps = 27/600 (4%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V  N I     C ++ L+D ++           P V  +N +++   +    E A  LF 
Sbjct: 163 VRANKITEAVECFRAMLEDGVV-----------PWVPFVNVLLTAMIRRNMVEDAHRLFD 211

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M +  ++ D ++  +L+      G   EA  +       G++ DA +YSI+ +     S
Sbjct: 212 EMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGS 271

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A K+++     G  P   TY  +I    ++GN  E L+L++ M+     +NV   +
Sbjct: 272 DLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVAT 331

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C  G ++ AL L  E+  VG+ P++  +S+LI    K   V KA +LY  M   
Sbjct: 332 SLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCM 391

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P  F    +L G  ++ ++  A +  D  +  N I  VV YNI++    +LG + EA
Sbjct: 392 GLQPTVFILNFLLKGFRKQNLLENAYLLLDGAV-ENGIASVVTYNIVLLWLCELGKVNEA 450

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L+ ++I K I+PS+V++N +I G CK G + DA  +++ I   GL+P+A+TYT  M  
Sbjct: 451 CNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEG 510

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
             ++G+ +    +  +M    I PT  T+  +I GLCK  ++ EA   L         P 
Sbjct: 511 SFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPT 570

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TYN II  + K   +  A  +  +M    + P   TY  LI+G C +  +  A  +  
Sbjct: 571 SMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHD 630

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTK-- 593
            ++   + L    Y T+I   C   D+  A  FF +++E G       + I I  Y    
Sbjct: 631 DMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLN 690

Query: 594 ------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                 +    M++N  P D +I   ++    + G L    +L + M+  G++PD F+ N
Sbjct: 691 NMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYN 750



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 163/655 (24%), Positives = 302/655 (46%), Gaps = 19/655 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y R   + +AV     M E  +   +   N LL  +   +++ D   L+D++       +
Sbjct: 162 YVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGD 221

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            YT  +++    +  +  +A  +  + AG+       S + ++   C+    ++A  L  
Sbjct: 222 CYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVE 281

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
              + G  P   +Y  +I      G+  EAL   ++M    V  +    + L KG+ +  
Sbjct: 282 GDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRG 341

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            ++ A ++  +++  G  P++  ++VLI    +IGNVE+  +L   M   G +  V   +
Sbjct: 342 DVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILN 401

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            LL    K   ++ A  LL      G+   +VTY+I++  LC+  KV++A  L+++M  K
Sbjct: 402 FLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIGK 460

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I+P+  ++  ++LG C+K  + +A    + +I S    + + Y I+++G  K G+   A
Sbjct: 461 GITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHA 520

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             ++ Q++   I P+  TFNS+I G CK G+V++AR  L+T       P+++TY   ++ 
Sbjct: 521 FNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDG 580

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           Y +EG I    ++ +EM    I P  +TYT +I G CK  K+  A+++ +DM   G+  D
Sbjct: 581 YVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELD 640

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
              Y T+I  FCK +D+  A +  +++    L P +  YNI+I       +++ A  L  
Sbjct: 641 ITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHK 700

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------- 592
            +  + I      YT++I     EG +  A+  + +M+ +G    I  Y           
Sbjct: 701 EMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHG 760

Query: 593 -----KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                      M  N   P   +   ++    + G+L   F L   M+  GL+PD
Sbjct: 761 QLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPD 815



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 247/488 (50%), Gaps = 4/488 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           Y   G V+ A+ +  ++ E+ +  ++  ++ L+     + + +   +LY  +K       
Sbjct: 337 YCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPT 396

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+  + ++ G  +Q+ L++A L L + A +    SVV+ N ++   C+LG    A  L+ 
Sbjct: 397 VFILNFLLKGFRKQNLLENAYLLL-DGAVENGIASVVTYNIVLLWLCELGKVNEACNLWD 455

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+  G+ P   SYN +I G C  G M++A E  N +   G++P+AITY+IL +G     
Sbjct: 456 KMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKG 515

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               A+ +  +++  G  P   T+  +I G C++G V E        + Q F    + Y+
Sbjct: 516 DCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYN 575

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++    K G ID A  +  EM    + P+++TY+ LI G CK +K+  A++++++M  K
Sbjct: 576 CIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRK 635

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            +  +   +  ++ G C+ + +  A  +F  L+      + ++YNIMI  Y  L N+  A
Sbjct: 636 GLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAA 695

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + L++++I  +I   +  + SLI G  K GK++ A  L   +   G+ P    Y   +N 
Sbjct: 696 LNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLING 755

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C  G ++    +L+EM+   I PT + Y  +I G  K+  LQEA +L ++M   G+ PD
Sbjct: 756 LCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPD 815

Query: 483 QITYNTII 490
             TY+ ++
Sbjct: 816 DTTYDILV 823



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 228/454 (50%), Gaps = 4/454 (0%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYD--DIKVSETPRNVY 64
           S+ G V  A  +  +MK + L+ ++   N LL   R  +++ + Y   D  V     +V 
Sbjct: 373 SKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVV 432

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +IV+  LC+  ++ +A     +  GK   PS+VS N ++  +CK G  + A  +   +
Sbjct: 433 TYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGI 492

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ GL P+A +Y IL+ G    G  E A    + M   G+ P   T++ +  G   + ++
Sbjct: 493 IESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRV 552

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           S A   +   + +   P  +TY  +I GY + G ++    +   M       NVI Y+ L
Sbjct: 553 SEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSL 612

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++  CKS ++D AL +  +M+  GL+ D+  Y+ LI G CK   +  A + ++++    +
Sbjct: 613 INGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGL 672

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAV 363
           +PN+  +  I++         EA +     +++N I  D+ +Y  +IDG +K G +  A+
Sbjct: 673 TPNTIVYN-IMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFAL 731

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            LY +++ + I P I  +N LI G C +G++ +A ++L  +  + + P+ + Y T +  +
Sbjct: 732 DLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGH 791

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
            +EGN+Q    L  EM  K + P   TY +++ G
Sbjct: 792 FKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 134/593 (22%), Positives = 254/593 (42%), Gaps = 54/593 (9%)

Query: 104 IMSRYCKLGFAEVAKGLFCLML----KYGLH-PDAFSYNILIHGLCIAGSMEEALEFTND 158
           ++++Y     A  AK L  L++    +YG    D+  +N L+     A  + EA+E    
Sbjct: 118 LLNKYVFGDSAPAAKVLVELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRA 177

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M   GV P     ++L       + +  A ++  ++  +    D  T  VL+    + G 
Sbjct: 178 MLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGK 237

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
             E  +       +G KL+  +YS+++ ++C+   +D A  L+   E +G  P   TY+ 
Sbjct: 238 FVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAA 297

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           +I    +     +A++L +EM   R+  N     +++ G C +  +  A   FD ++   
Sbjct: 298 VIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVG 357

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF---------- 388
              +V +++++I+   K+GN+ +A +LY ++    + P++   N L+ GF          
Sbjct: 358 VTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAY 417

Query: 389 ------------------------CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
                                   C+ GKV +A  L D +   G+ PS V+Y   +  +C
Sbjct: 418 LLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHC 477

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           ++G +     ++  +    + P  +TYT++++G  K+   + A  + + M   G+ P   
Sbjct: 478 KKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDY 537

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           T+N+II   CK   + +A   LN     +  PTS TYN +IDG    G + +A+ +   +
Sbjct: 538 TFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREM 597

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK----------- 593
               IS   + YT++I   C    +  A+     M  KG E+ I  Y             
Sbjct: 598 CRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDM 657

Query: 594 ----SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                FF  +L  G  P+  +  +M+ A+    ++ +   L   MI + +  D
Sbjct: 658 ENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCD 710


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 149/610 (24%), Positives = 285/610 (46%), Gaps = 48/610 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           Y R G V +AV    +M   +   S+ ++N++   L    + +    +Y  ++      +
Sbjct: 86  YGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSD 145

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT +I I   C+ +R   A+  L+         + V+   +++     G  + A+ LF 
Sbjct: 146 VYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFD 205

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML   L PD  ++N L+H LC  G + E+                              
Sbjct: 206 EMLARCLCPDVVAFNKLVHVLCKKGLVFES------------------------------ 235

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV---------MLSQG 233
                 +++ K+L +G  P++ T+ + + G C+ G ++  ++   V         M++ G
Sbjct: 236 -----ERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGG 290

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
           F+ + + Y+ ++   CK G + +A  +L +    G KPD  TY  LI G CK     +A+
Sbjct: 291 FEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAM 350

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            ++ +   K + P+   +  ++ GL ++ +I  A    + +  + C+ ++  YN++I+G 
Sbjct: 351 AVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGL 410

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K+G + +A  L    I K   P I T+N+LI G+CK  K+  A  +++ +   G+ P  
Sbjct: 411 CKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDV 470

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           +TY T +N  C+ G  + ++ + + ME K   P  +TY +++  LCK  K+ EAV LL +
Sbjct: 471 ITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGE 530

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW-LHNLEPTSATYNILIDGLCVNG 532
           M   G+ PD +++ T+   FCK  D+  A+QL  +M   +++  T+ATYNI++       
Sbjct: 531 MKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQL 590

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           ++  A  L   ++          Y  +I   C  G++ +   F  + +EK F  S+  + 
Sbjct: 591 NMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFG 650

Query: 593 KSFFCMMLSN 602
           +   C+ + +
Sbjct: 651 RVLNCLCVKD 660



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 142/549 (25%), Positives = 261/549 (47%), Gaps = 28/549 (5%)

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           M  Y + G  + A   F  M  Y   P   S+N +++ L   G   +A +    M   GV
Sbjct: 83  MKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGV 142

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
           + D  TY+I  K F   ++   A ++++ +   G D + V Y  ++ G    G  +   +
Sbjct: 143 QSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARE 202

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L + ML++    +V+A++ L+  +CK G + E+  LL ++   G+ P+L T++I ++GLC
Sbjct: 203 LFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLC 262

Query: 285 KQDKVHKAI---------QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++  + +A+         +   +M +    P+   + +I+ G C+K M+ +A       +
Sbjct: 263 REGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAV 322

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D   Y  +I+G+ K G+   A+ +++  + K + PSIV +N+LI G  + G + 
Sbjct: 323 FKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLIL 382

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A +L++ +  +G  P+  TY   +N  C+ G +     L+ +   K   P   TY  +I
Sbjct: 383 PALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLI 442

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G CKQ KL  A +++  M+  G+TPD ITYNT++   CK     +  ++   M      
Sbjct: 443 DGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCT 502

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TYNI++D LC    +  A  LL  ++   +    V++ T+    C  GD+  A   
Sbjct: 503 PNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQL 562

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
           F +M EK +++    +T + + +++S               AF +  ++    +L +VM 
Sbjct: 563 FRRM-EKQYDVC---HTTATYNIIVS---------------AFSEQLNMNMAMKLFSVMK 603

Query: 636 KSGLLPDKF 644
            SG  PD +
Sbjct: 604 NSGCDPDNY 612



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 243/479 (50%), Gaps = 19/479 (3%)

Query: 62  NVYTNSIVIDGLCQQ---------SRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
           N++T +I + GLC++         SR+ +A  +L++     F P  ++ N+I+  YCK G
Sbjct: 250 NLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKG 309

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
             + A  +    +  G  PD F+Y  LI+G C  G  + A+    D    G+ P  + Y+
Sbjct: 310 MVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYN 369

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L KG      I  A +++ ++   G  P+I TY ++I G C++G V +   L +  +++
Sbjct: 370 TLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAK 429

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   ++  Y+ L+   CK  ++D A  ++  M + G+ PD++TY+ L+ GLCK  K  + 
Sbjct: 430 GCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEV 489

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           ++++  M  K  +PN   +  I+  LC+ + + EA      +       DVV +  +  G
Sbjct: 490 MEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTG 549

Query: 353 YVKLGNIGEAVQLYRQLIEKR--ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           + K+G+I  A QL+R++ EK+  +  +  T+N ++  F +   +  A +L   +K  G +
Sbjct: 550 FCKIGDIDGAYQLFRRM-EKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCD 608

Query: 411 PSAVTYTTFMNAYCEEGNI-QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           P   TY   ++ +C+ GNI Q    LL+ ME + I P+  T+  V+  LC + K+ EAV 
Sbjct: 609 PDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFI-PSLTTFGRVLNCLCVKDKVHEAVG 667

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           ++  M   G+ P+  T NTI  +    K +  A ++L +  L        TY +L DG+
Sbjct: 668 IIHLMLQKGIVPE--TVNTIFEAD---KKVVAAPKILVEDLLKKGHIAYYTYELLYDGI 721


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 250/501 (49%), Gaps = 36/501 (7%)

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +  +L++A+  + E   +    S  +LN ++     +G  E+A+ +F  M + G+ PD  
Sbjct: 166 ENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCV 225

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           S+ +++   C  G + EA ++ N M   G   D  T +++   F     ++       K+
Sbjct: 226 SFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKM 285

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           +  G  P+++ +T LI G C+ G++++  +L E M+ +G+K NV  ++ L+  +CK G  
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345

Query: 255 DEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           ++A  L  ++  + G KP++ TY+ +I G CK+DK+++A  L + M  + + PN+     
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT--- 402

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
                                           Y  +IDG+ K+GN   A +L   + ++ 
Sbjct: 403 --------------------------------YTTLIDGHCKVGNFVRAYELMDLMGKEG 430

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
            SP+I T+N++I G CK G + +A RLL+ + +HGL+   VTYT  M+ +C + +  R L
Sbjct: 431 FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSL 490

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
               +M      P   +YT +I   C+Q +++E+ +L E+   +G+ P + TY ++I  +
Sbjct: 491 VFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGY 550

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C+  +   A +L  +M  H   P S TY  LI GLC    L +A  L  ++ +  +S  +
Sbjct: 551 CRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCE 610

Query: 554 VAYTTIIKAHCAEGDVHKAMT 574
           V   T+   +C + D   A+ 
Sbjct: 611 VTRLTLAYEYCKKDDSSTAIN 631



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 215/439 (48%), Gaps = 1/439 (0%)

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G ++EA+    +M   G+     T + +      +  +  A  +  ++  +G  PD V++
Sbjct: 168 GKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            +++   C +G V E  K    M+ +GF ++    ++++ + C+ G ++  +G  ++M  
Sbjct: 228 KLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVE 287

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           +GL P+++ ++ LI GLCKQ  + +A +L  EM  +   PN + H  ++ GLC+K    +
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEK 347

Query: 327 ARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           A   F  L+ S+  + +V  Y  MI+GY K   +  A  L  ++ E+ + P+  T+ +LI
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G CK G    A  L+D +   G  P+  TY   ++  C++G++     LL ++    + 
Sbjct: 408 DGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQ 467

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
              VTYT+++   C+Q     ++     M  +G TPD  +Y T+I  FC+ K ++++ +L
Sbjct: 468 ADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERL 527

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
             +     L PT  TY  +I G C  G+   A  L   +  H  +   + Y  +I   C 
Sbjct: 528 FEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCK 587

Query: 566 EGDVHKAMTFFCQMVEKGF 584
           E  +  A   +  M++KG 
Sbjct: 588 ESKLDDARNLYDAMMDKGL 606



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 209/404 (51%), Gaps = 4/404 (0%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +++ID  CQ+  +   + +  +       P+V++  A+++  CK G  + A  L   M
Sbjct: 261 TCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEM 320

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           ++ G  P+ +++  LI GLC  G  E+A   F   +   G +P+  TY+ +  G+    +
Sbjct: 321 VRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDK 380

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           ++ A  ++ ++  +G  P+  TYT LI G+C++GN     +L ++M  +GF  N+  Y+ 
Sbjct: 381 LNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNA 440

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++  +CK G +DEA  LL ++   GL+ D VTY+IL+   C+Q   ++++  +N+M    
Sbjct: 441 IIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVG 500

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +P+  ++  ++   C ++ + E+   F+  +    I     Y  MI GY + GN   AV
Sbjct: 501 FTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAV 560

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L++++     +P  +T+ +LI G CK  K+ DAR L D +   GL P  VT  T    Y
Sbjct: 561 KLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEY 620

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           C++ +    + +L  +E +       T   +++ LC + KL  A
Sbjct: 621 CKKDDSSTAINVLDRLEKRQWIR---TVNTLVRKLCSEGKLDMA 661



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 203/415 (48%), Gaps = 16/415 (3%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ +  ++G++ EA+ ++ EM+  GL     T + ++        V  A  ++ EMC + 
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           +SP+  +   +++  C    + EA  + ++++    I D     ++ID + + G +   V
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
             + +++E  ++P+++ F +LI G CK G +  A  LL+ +   G +P+  T+TT ++  
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 424 CEEGNIQRLLAL-LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           C++G  ++   L L+ + +    P   TYT +I G CK+ KL  A  LL  M   G+ P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             TY T+I   CK  +  +A++L++ M      P   TYN +IDGLC  G L  A  LL 
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCMM- 599
            +  H +    V YT ++  HC + D ++++ FF +M++ GF   I  YT   S FC   
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQK 519

Query: 600 ------------LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                       +S G  P ++    M+  + + G+     +L   M   G  PD
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPD 574



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 184/390 (47%), Gaps = 4/390 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   + +I+GLC+Q  ++ A   L+E   + + P+V +   ++   CK G+ E A  LF
Sbjct: 293 NVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLF 352

Query: 122 CLMLKY-GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             +++  G  P+  +Y  +I+G C    +  A    + M   G+ P+  TY+ L  G   
Sbjct: 353 LKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCK 412

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +     A++++  +  +G  P+I TY  +I G C+ G+++E  +L   +   G + + + 
Sbjct: 413 VGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVT 472

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y++L+S  C+    + +L    +M  VG  PD+ +Y+ LI   C+Q ++ ++ +L+ E  
Sbjct: 473 YTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAV 532

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           S  + P    + +++ G C     + A   F  +    C  D + Y  +I G  K   + 
Sbjct: 533 SLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLD 592

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  LY  +++K +SP  VT  +L Y +CK    + A  +LD ++         T  T +
Sbjct: 593 DARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLV 649

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
              C EG +        ++  K      VT
Sbjct: 650 RKLCSEGKLDMAALFFHKLLDKEPNVNRVT 679



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 180/378 (47%), Gaps = 7/378 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR-NV 63
           + G +  A  ++ +M     K ++ T+ +L+  L     T+  + L+  +  S+  + NV
Sbjct: 306 KQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNV 365

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T + +I+G C++ +L  A + L     +   P+  +   ++  +CK+G    A  L  L
Sbjct: 366 HTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDL 425

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M K G  P+ ++YN +I GLC  GS++EA    N +  HG++ D +TY+IL       + 
Sbjct: 426 MGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQAD 485

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
            + +     K+L  G  PDI +YT LI  +C+   ++E  +L E  +S G       Y+ 
Sbjct: 486 TNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTS 545

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++   C+ G    A+ L   M   G  PD +TY  LI GLCK+ K+  A  LY+ M  K 
Sbjct: 546 MICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKG 605

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           +SP       +    C+K+  + A    D L     I+ V   N ++      G +  A 
Sbjct: 606 LSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTV---NTLVRKLCSEGKLDMAA 662

Query: 364 QLYRQLIEKRISPSIVTF 381
             + +L++K  + + VT 
Sbjct: 663 LFFHKLLDKEPNVNRVTL 680



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 142/321 (44%), Gaps = 14/321 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI-----MWDLYDDIKVSETP 60
           Y +   ++ A  ++++M+E  L  +  TY +L+    H  +      ++L D +      
Sbjct: 375 YCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDG--HCKVGNFVRAYELMDLMGKEGFS 432

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N+YT + +IDGLC++  L +A   L + +        V+   +MS +C+      +   
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  MLK G  PD  SY  LI   C    M+E+     +    G+ P   TY+ +  G+  
Sbjct: 493 FNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCR 552

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
               S A K+ Q++   G  PD +TY  LI G C+   +++   L + M+ +G     + 
Sbjct: 553 YGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVT 612

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
              L    CK      A+ +L  +E    +  + T + L+R LC + K+  A   ++++ 
Sbjct: 613 RLTLAYEYCKKDDSSTAINVLDRLEK---RQWIRTVNTLVRKLCSEGKLDMAALFFHKLL 669

Query: 301 SKRISPNSFAHGAILLGLCEK 321
            K   PN   +   LLG   K
Sbjct: 670 DK--EPN--VNRVTLLGFMNK 686



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 129/302 (42%), Gaps = 56/302 (18%)

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N ++D  V +G +  A  ++ ++ ++ +SP  V+F  ++   C  G+V +A + L+ +  
Sbjct: 193 NCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVE 252

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G      T T  ++A+C++G + R++                            WK+ E
Sbjct: 253 RGFIVDNATCTLIIDAFCQKGYVNRVVGYF-------------------------WKMVE 287

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
                     +G+ P+ I +  +I   CK   +++AF+LL +M     +P   T+  LID
Sbjct: 288 ----------MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLID 337

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKV-AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           GLC  G  + A  L + L   +     V  YT +I  +C E  +++A     +M E+G  
Sbjct: 338 GLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV 397

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
            +   YT       L +G       C+V        G+    +EL  +M K G  P+ + 
Sbjct: 398 PNTNTYTT------LIDGH------CKV--------GNFVRAYELMDLMGKEGFSPNIYT 437

Query: 646 IN 647
            N
Sbjct: 438 YN 439


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 141/526 (26%), Positives = 270/526 (51%), Gaps = 4/526 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVY 64
           R G +  A  ++A+++   ++ ++ TYN L+  L  +   +  + L   +       ++ 
Sbjct: 228 RAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIV 287

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T  I+I+GL +  R  +    LQE  G    P+ V  N ++  +C+ G    A  LF  M
Sbjct: 288 TFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEM 347

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY-SILAKGFHLLSQ 183
           +  G+     +YN++   LC  G ME A +  ++M   G+      + S++A       +
Sbjct: 348 VSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGR 407

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +    ++I++++ +   P+    T  I   C+ G  EE  ++  ++L +G  +N+   + 
Sbjct: 408 LDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNA 467

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +C+   + EA  +L  M   G++ D +TY+I+I+  CK  K+ +AIQL ++M  + 
Sbjct: 468 LIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRG 527

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+ F     L   C    + +     D +       D+V Y  +IDGY K  ++ +A 
Sbjct: 528 FKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKAN 587

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +   +LI+  + P+ V +N+LI G+ +NG ++DA  +LDT+K +G++P+ +TY + M   
Sbjct: 588 KYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWM 647

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C  G ++    +  +   K I    + YT++I+G CK  K+ EAV   ++M+   + P++
Sbjct: 648 CHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNK 707

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +TY T++ ++CKC +  +AF+L ++M    + P + +YN LI G C
Sbjct: 708 MTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCC 753



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 152/524 (29%), Positives = 259/524 (49%), Gaps = 3/524 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +VYT +++I  LC+   +  A + L E       P+VV+ N +M   C+ G  E A  L 
Sbjct: 215 DVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLK 274

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M++  L P   ++ ILI+GL       E      +M   G+ P+ + Y+ L  G+H  
Sbjct: 275 GRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLI-GWHCR 333

Query: 182 -SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
               S A ++  +++ KG    +VTY ++    C+ G +E   ++ + ML  G  ++   
Sbjct: 334 EGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSL 393

Query: 241 Y-SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           + SV+   +  +GR+D  L L+ EM A  LKP+    +  I+ LCK+ K  +A +++  +
Sbjct: 394 FNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLV 453

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K +  N     A++ GLC+   + EA     +++ S    D + YNIMI    K   +
Sbjct: 454 LGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKM 513

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA+QL   +I++   P + TFN+ +  +C  GKV D   LLD +K  GL+P  VTY T 
Sbjct: 514 EEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTI 573

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ YC+  ++ +    L E+    + P  V Y  +I G  +   + +A+ +L+ M   G+
Sbjct: 574 IDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGI 633

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P  ITYN+++   C    + +A ++  Q  L N+E     Y I+I G C  G +  A  
Sbjct: 634 QPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVM 693

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
               +   +I   K+ YTT++ A+C  G+  +A   F +MV  G
Sbjct: 694 YFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSG 737



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 159/651 (24%), Positives = 288/651 (44%), Gaps = 79/651 (12%)

Query: 67  SIVIDG--LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL------------- 111
           S+V DG  L    RL   +LF        F P  V+  AI    C               
Sbjct: 105 SLVADGASLPSARRLISRLLF--------FNPLSVAAAAIADSDCTATADLLVRACLNSP 156

Query: 112 --GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG--VEPD 167
             G    A   F  +   G  P   + NIL+  L   G ++ A +   +M R G  V PD
Sbjct: 157 APGSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEM-RDGNAVAPD 215

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
             TY+++ K      +I  A+ ++ +L   G  P +VTY VL+   C+ G VEE  +L+ 
Sbjct: 216 VYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKG 275

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M+    + +++ + +L++ + +  R  E   +L EME  G+ P+ V Y+ LI   C++ 
Sbjct: 276 RMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREG 335

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
              +A++L++EM SK I      +  I   LC++  +  A    D ++++       L+N
Sbjct: 336 HCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFN 395

Query: 348 IMIDGYVK-LGNIGEAVQLYRQLIEKRISPS----------------------------- 377
            ++  +++  G +   ++L R+++ + + P+                             
Sbjct: 396 SVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLG 455

Query: 378 ------IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
                 I T N+LI+G C+   + +A ++L  +   G+E   +TY   +   C+   ++ 
Sbjct: 456 KGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEE 515

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            + L  +M  +   P   T+   ++  C   K+++ + LL+ M   G+ PD +TY TII 
Sbjct: 516 AIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIID 575

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            +CK KD+ KA + L ++  + L P +  YN LI G   NG + +A  +L +++ + I  
Sbjct: 576 GYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQP 635

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFF 596
           T + Y +++   C  G V +A   F Q + K  E+ +  YT                 +F
Sbjct: 636 TPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYF 695

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             M      P++     ++ A+ + G+    F+L   M+ SG++PD    N
Sbjct: 696 KEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYN 746



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 221/442 (50%), Gaps = 8/442 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL------RHTDIMWDLYDDIKVSET 59
           + R G   +A+ +  +M    +K ++ TYN +   L       H + + D  + +    T
Sbjct: 331 HCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILD--EMLLAGMT 388

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
                 NS+V   L    RL   +  ++E   +   P+   + A +   CK G  E A  
Sbjct: 389 VHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAE 448

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           ++ L+L  GL  +  + N LIHGLC   +M+EA +    M   GVE D ITY+I+ +   
Sbjct: 449 IWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCC 508

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
             S++  A ++   ++ +G  PD+ T+   +  YC +G VE+ L L + M S+G K +++
Sbjct: 509 KASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIV 568

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y  ++   CK+  + +A   L E+   GL+P+ V Y+ LI G  +   +  AI + + M
Sbjct: 569 TYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTM 628

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               I P    + +++  +C   ++ EA+  F   I+ N    V+ Y I+I G+ K+G I
Sbjct: 629 KHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKI 688

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EAV  ++++  + I P+ +T+ +L+Y +CK G   +A +L D +   G+ P  V+Y T 
Sbjct: 689 DEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTL 748

Query: 420 MNAYCEEGNIQRLLALLQEMET 441
           ++  CE  ++ +++    EM +
Sbjct: 749 ISGCCEVDSLDKIVESPAEMSS 770



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 230/507 (45%), Gaps = 41/507 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTY----NSLLYNLRHTDIMWDLYDDIKVSETPRNV 63
           R+G V +A  +  +M E  L+ SI T+    N L    R  ++   L +      TP  V
Sbjct: 263 RSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEV 322

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             N + I   C++    +A+    E   K    +VV+ N I    CK G  E A+ +   
Sbjct: 323 IYNQL-IGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDE 381

Query: 124 MLKYG------------------------------------LHPDAFSYNILIHGLCIAG 147
           ML  G                                    L P+       I  LC  G
Sbjct: 382 MLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRG 441

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
             EEA E    +   G+  +  T + L  G    + +  A KV++ ++  G + D +TY 
Sbjct: 442 KHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYN 501

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           ++I   C+   +EE ++LR+ M+ +GFK ++  ++  L + C  G++++ L LL +M++ 
Sbjct: 502 IMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSE 561

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GLKPD+VTY  +I G CK   VHKA +   E+    + PN+  + A++ G      I++A
Sbjct: 562 GLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDA 621

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
               D++  +      + YN ++      G + EA +++ Q I K I   ++ +  +I G
Sbjct: 622 IGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQG 681

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           FCK GK+ +A      +    + P+ +TYTT M AYC+ GN +    L  EM +  I P 
Sbjct: 682 FCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPD 741

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            V+Y  +I G C+   L + V+   +M
Sbjct: 742 TVSYNTLISGCCEVDSLDKIVESPAEM 768


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 232/444 (52%), Gaps = 8/444 (1%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N  T + +++G  +Q R  D    L+  A +   P+VVS N ++   CKL     A+ 
Sbjct: 7   PPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEE 66

Query: 120 LFCLMLKYGLH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           L   M+  G    PD  +Y+ L+ G C AG +EE+ E   ++   G+ PDA+ Y+ +   
Sbjct: 67  LVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMAS 126

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
               +++  A +++++++  G  P ++T+  LI G C+  N+E    L + M + G K +
Sbjct: 127 LCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKAD 186

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V+ Y+ L+  +CK+GR+ EA  LL  M+A G  PD+V YS  + GLCK  KV  A Q+  
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLE 246

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN-CIQDVVLYNIMIDGYVKL 356
           +M      PN   +  IL GLC+   I  A    + +  S+ C  +VV Y+ ++DG  KL
Sbjct: 247 QMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   EA  +   +      P +VT++SL+ G CK GK+ +A   +  + + G +P+AVTY
Sbjct: 307 GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTY 366

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKA-----IGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
            + ++  C  G +     +++EM +         P+  TY  +I GLCK  ++ +A++  
Sbjct: 367 CSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFF 426

Query: 472 EDMYVIGVTPDQITYNTIIRSFCK 495
           + M   G  PD ++Y+TI+    +
Sbjct: 427 QRMRSQGCDPDGVSYSTIVEGLAR 450



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 246/457 (53%), Gaps = 8/457 (1%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M + G  P++ ++N L++G    G   +       M   G++P+ ++Y+ L +G   L +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 184 ISGAWKVIQKLLIKG--SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
              A ++++ ++ +G  S PD+VTY+ L+ GYC+ G VEE  +L + ++S+G + + + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +++S+CKS R+ EAL LL EM   G  P L+T++ LI G C++  +  A  L   M +
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +  +   +  ++ GLC+   + EA    + +  S C  DVV Y+  + G  K G +  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI-KLHGLEPSAVTYTTFM 420
           A Q+  Q+ +    P++VT+N+++ G CK+GK+  A  +++ +    G   + V Y+T +
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C+ G  Q   ++++ M      P  VTY+ ++ GLCK  K++EAV+ + +M + G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQM-----WLHNLEPTSATYNILIDGLCVNGDLK 535
           P+ +TY +++   C C  L +A +++ +M        +  P+ +TYN LI GLC  G + 
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRID 420

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
           +A      ++        V+Y+TI++     G   +A
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 231/445 (51%), Gaps = 8/445 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+ V+ NA+++ + K G     + L   M   G+ P+  SYN L+ GLC      EA E 
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 156 TNDMGRHGVE--PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
             DM   G    PD +TYS L  G+    ++  + +++++++ +G  PD + YT ++   
Sbjct: 68  VRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASL 127

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+   + E L+L E M+  G    +I ++ L+S  C+   ++ A  LL  M A G+K D+
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADV 187

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VTY+ L+ GLCK  ++ +A QL   M +   +P+  A+ + + GLC+   +  A    + 
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQ 247

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR-ISPSIVTFNSLIYGFCKNG 392
           +  S+   +VV YN ++DG  K G I  A+++  Q+        ++V +++++ G CK G
Sbjct: 248 MRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           +  +AR +++ +   G  P  VTY++ +N  C+ G I+  +  ++EM  +   P  VTY 
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYC 367

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI-----TYNTIIRSFCKCKDLRKAFQLLN 507
            ++ GLC   +L EA +++E+M   G   D       TYN +I   CK   +  A +   
Sbjct: 368 SLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQ 427

Query: 508 QMWLHNLEPTSATYNILIDGLCVNG 532
           +M     +P   +Y+ +++GL  +G
Sbjct: 428 RMRSQGCDPDGVSYSTIVEGLARSG 452



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 229/446 (51%), Gaps = 11/446 (2%)

Query: 33  TYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE- 88
           T+N+L+          D   L + +       NV + + +++GLC+  R  +A   +++ 
Sbjct: 12  TFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDM 71

Query: 89  -TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
            + G    P +V+ + ++S YCK G  E ++ L   ++  GL PDA  Y  ++  LC + 
Sbjct: 72  ISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSA 131

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            + EALE   +M R G  P  IT++ L  G      +  A  ++Q +   G   D+VTY 
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYN 191

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            L+ G C+ G ++E  +L E M + G   +V+AYS  +  +CKSG++  A  +L +M   
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDS 251

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR-ISPNSFAHGAILLGLCEKEMITE 326
              P++VTY+ ++ GLCK  K+  A+++  +M S      N   +  ++ GLC+     E
Sbjct: 252 DHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           AR   +++  + C  DVV Y+ +++G  K G I EAV+  R++  +   P+ VT+ SL++
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371

Query: 387 GFCKNGKVADARRLLDTIKLHG-----LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           G C  G++A+A R+++ +   G       PS  TY   +   C+ G I   L   Q M +
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS 431

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEA 467
           +   P  V+Y+ +++GL +  +  +A
Sbjct: 432 QGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 182/358 (50%), Gaps = 3/358 (0%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   G   N + ++ L++   K GR  +   LL  M A G++P++V+Y+ L+ GLCK ++
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 289 VHKAIQLYNEMCSK--RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            H+A +L  +M S+  R +P+   +  +L G C+   + E+R     +I      D ++Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
             ++    K   +GEA++L  ++I     P+++TFN+LI G C+   +  A  LL T+  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G++   VTY T M+  C+ G +Q    LL+ M+     P  V Y+  + GLCK  K+  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN-LEPTSATYNILI 525
           A Q+LE M      P+ +TYNTI+   CK   +  A +++ QM   +        Y+ ++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           DGLC  G  + A  ++ ++         V Y++++   C  G + +A+    +M  +G
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 167/332 (50%), Gaps = 3/332 (0%)

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M+  G  P+ VT++ L+ G  KQ +     +L   M ++ I PN  ++  +L GLC+ E 
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 324 ITEARMYFDSLIM--SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             EA      +I        D+V Y+ ++ GY K G + E+ +L +++I + + P  + +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
             ++   CK+ ++ +A  LL+ +   G  P+ +T+ T ++  C E N++   +LLQ M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
             +    VTY  ++ GLCK  +LQEA QLLE M   G  PD + Y++ +   CK   +  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN-ISLTKVAYTTII 560
           A Q+L QM   + +P   TYN ++DGLC +G +  A  ++  +   +   L  V Y+T++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
              C  G   +A +    M   G    +  Y+
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYS 332



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 123/246 (50%), Gaps = 2/246 (0%)

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+ VTFN+L+ GF K G+  D  RLL+T+   G++P+ V+Y   +   C+         L
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 436 LQEMETKA--IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           +++M ++     P  VTY+ ++ G CK  K++E+ +LL+++   G+ PD + Y  ++ S 
Sbjct: 68  VRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASL 127

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           CK   L +A +LL +M      PT  T+N LI G C   +L+ AD LL ++    +    
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADV 187

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
           V Y T++   C  G + +A     +M   G    +  Y+   + +  S       ++ E 
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQ 247

Query: 614 MLIAFH 619
           M  + H
Sbjct: 248 MRDSDH 253



 Score = 46.2 bits (108), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 69/176 (39%), Gaps = 22/176 (12%)

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G  P+ +T+N ++  F K        +LL  M    ++P   +YN L++GLC    
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 534 LKNADCLLVSLQEHNISLTK--VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
              A+ L+  +       T   V Y+T++  +C  G V ++     +++ +G       Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           TK                    ++ +  +   LG   EL   MI++G  P     N
Sbjct: 121 TK--------------------VMASLCKSARLGEALELLEEMIRAGCCPTLITFN 156


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 236/454 (51%), Gaps = 1/454 (0%)

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           + H  C +G+  E+L     M R G  PD I  + L KGF  L  +  A +V++ +L K 
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVME-ILEKF 149

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD+  Y  LI G+C++  +++  ++ + M S+ F  + + Y++++ S+C  G++D AL
Sbjct: 150 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +L ++ +   +P ++TY+ILI     +  V +A++L +EM S+ + P+ F +  I+ G+
Sbjct: 210 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++ M+  A     +L +  C  DV+ YNI++   +  G   E  +L  ++  ++  P++
Sbjct: 270 CKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 329

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VT++ LI   C++GK+ +A  LL  +K  GL P A +Y   + A+C EG +   +  L+ 
Sbjct: 330 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 389

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M +    P  V Y  V+  LCK  K  +A+++   +  +G +P+  +YNT+  +     D
Sbjct: 390 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 449

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
             +A  ++ +M  + ++P   TYN +I  LC  G +  A  LLV ++      + V Y  
Sbjct: 450 KIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNI 509

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           ++   C    +  A+     MV  G   +   YT
Sbjct: 510 VLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYT 543



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 226/459 (49%), Gaps = 1/459 (0%)

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           C+     +++  L+    K + P V+    ++  +  L     A  +  ++ K+G  PD 
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
           F+YN LI+G C    +++A    + M      PD +TY+I+        ++  A KV+ +
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           LL     P ++TYT+LI      G V+E LKL + MLS+G K ++  Y+ ++  MCK G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +D A  ++  +E  G +PD+++Y+IL+R L  Q K  +  +L  +M S++  PN   +  
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++  LC    I EA      +       D   Y+ +I  + + G +  A++    +I   
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
             P IV +N+++   CKNGK   A  +   +   G  P++ +Y T  +A    G+  R L
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            ++ EM +  I P  +TY  +I  LC++  + +A +LL DM      P  +TYN ++  F
Sbjct: 455 HMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGF 514

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           CK   +  A  +L+ M  +   P   TY +LI+G+   G
Sbjct: 515 CKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAG 553



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 219/446 (49%), Gaps = 11/446 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+  + +I+G C+ +R+ DA   L     K+F P  V+ N ++   C  G  ++A  + 
Sbjct: 153 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 212

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +L     P   +Y ILI    + G ++EAL+  ++M   G++PD  TY+ + +G    
Sbjct: 213 DQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKE 272

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A+++I+ L +KG +PD+++Y +L+      G  EEG KL   M S+    NV+ Y
Sbjct: 273 GMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 332

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S+L++++C+ G+I+EA+ LL  M+  GL PD  +Y  LI   C++ ++  AI+    M S
Sbjct: 333 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 392

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               P+   +  +L  LC+     +A   F  L    C  +   YN M       G+   
Sbjct: 393 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 452

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ +  +++   I P  +T+NS+I   C+ G V  A  LL  ++     PS VTY   + 
Sbjct: 453 ALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLL 512

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C+   I+  + +L  M      P   TYTV+I+G+       EA++L  D+  I    
Sbjct: 513 GFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAIS 572

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLN 507
           +         SF   K L + F LLN
Sbjct: 573 EY--------SF---KRLHRTFPLLN 587



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 227/419 (54%), Gaps = 1/419 (0%)

Query: 92  KEFG-PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
           ++FG P V + NA+++ +CK+   + A  +   M      PD  +YNI+I  LC  G ++
Sbjct: 147 EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 206

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            AL+  + +     +P  ITY+IL +   L   +  A K++ ++L +G  PD+ TY  +I
Sbjct: 207 LALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTII 266

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C+ G V+   ++   +  +G + +VI+Y++LL ++   G+ +E   L+ +M +    
Sbjct: 267 RGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 326

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P++VTYSILI  LC+  K+ +A+ L   M  K ++P+++++  ++   C +  +  A  +
Sbjct: 327 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 386

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            +++I   C+ D+V YN ++    K G   +A++++ +L E   SP+  ++N++      
Sbjct: 387 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 446

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           +G    A  ++  +  +G++P  +TY + ++  C EG + +   LL +M +    P+ VT
Sbjct: 447 SGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVT 506

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           Y +V+ G CK  ++++A+ +L+ M   G  P++ TY  +I          +A +L N +
Sbjct: 507 YNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 215/445 (48%), Gaps = 16/445 (3%)

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+ GN  E L L E M+ +G+  +VI  + L+        + +A+ ++  +E  G +PD+
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
             Y+ LI G CK +++  A ++ + M SK  SP++  +  ++  LC +  +  A    D 
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L+  NC   V+ Y I+I+  +  G + EA++L  +++ + + P + T+N++I G CK G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V  A  ++  ++L G EP  ++Y   + A   +G  +    L+ +M ++   P  VTY++
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I  LC+  K++EA+ LL+ M   G+TPD  +Y+ +I +FC+   L  A + L  M    
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
             P    YN ++  LC NG    A  +   L E   S    +Y T+  A  + GD  +A+
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAF 618
               +MV  G +     Y     C+               M S  F P      ++L+ F
Sbjct: 455 HMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGF 514

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDK 643
            +   +    ++   M+ +G  P++
Sbjct: 515 CKAHRIEDAIDVLDSMVGNGCRPNE 539



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 184/414 (44%), Gaps = 51/414 (12%)

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C+SG   E+L LL  M   G  PD++  + LI+G      V KA+++  E+  K   P+ 
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDV 154

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           FA                                   YN +I+G+ K+  I +A ++  +
Sbjct: 155 FA-----------------------------------YNALINGFCKMNRIDDATRVLDR 179

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  K  SP  VT+N +I   C  GK+  A ++LD +     +P+ +TYT  + A   EG 
Sbjct: 180 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGG 239

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +   L LL EM ++ + P   TY  +I+G+CK+  +  A +++ ++ + G  PD I+YN 
Sbjct: 240 VDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNI 299

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           ++R+        +  +L+ +M+    +P   TY+ILI  LC +G ++ A  LL  ++E  
Sbjct: 300 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 359

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--------------- 593
           ++    +Y  +I A C EG +  A+ F   M+  G    I +Y                 
Sbjct: 360 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 419

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             F  +   G  P+      M  A    GD      +   M+ +G+ PD+   N
Sbjct: 420 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYN 473



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 197/411 (47%), Gaps = 10/411 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + +   + DA  V+ +M+  D      TYN ++ +L      D+   + D +        
Sbjct: 164 FCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPT 223

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T +I+I+    +  + +A+  L E   +   P + + N I+   CK G  + A  +  
Sbjct: 224 VITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIR 283

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   G  PD  SYNIL+  L   G  EE  +    M     +P+ +TYSIL        
Sbjct: 284 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 343

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +I  A  +++ +  KG  PD  +Y  LI  +C+ G ++  ++  E M+S G   +++ Y+
Sbjct: 344 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 403

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +L+++CK+G+ D+AL +  ++  VG  P+  +Y+ +   L       +A+ +  EM S 
Sbjct: 404 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSN 463

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCI--QDVVLYNIMIDGYVKLGNI 359
            I P+   + +++  LC + M+ +A   F+ L+ M +C     VV YNI++ G+ K   I
Sbjct: 464 GIDPDEITYNSMISCLCREGMVDKA---FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 520

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL-DTIKLHGL 409
            +A+ +   ++     P+  T+  LI G    G  A+A  L  D ++++ +
Sbjct: 521 EDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAI 571



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 162/336 (48%), Gaps = 3/336 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G V +A+ ++ +M    LK  + TYN+++  +      D  +++  ++++     +V + 
Sbjct: 238 GGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISY 297

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I++  L  Q + ++    + +   ++  P+VV+ + +++  C+ G  E A  L  LM +
Sbjct: 298 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 357

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL PDA+SY+ LI   C  G ++ A+EF   M   G  PD + Y+ +        +   
Sbjct: 358 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 417

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A ++  KL   G  P+  +Y  +       G+    L +   M+S G   + I Y+ ++S
Sbjct: 418 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMIS 477

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C+ G +D+A  LL +M +    P +VTY+I++ G CK  ++  AI + + M      P
Sbjct: 478 CLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRP 537

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           N   +  ++ G+       EA    + L+  N I +
Sbjct: 538 NETTYTVLIEGIGFAGYRAEAMELANDLVRINAISE 573



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 34/190 (17%)

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI------------ 484
           ++  ++++G        +    C+     E++ LLE M   G  PD I            
Sbjct: 74  RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 133

Query: 485 ----------------------TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
                                  YN +I  FCK   +  A ++L++M   +  P + TYN
Sbjct: 134 RNVPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 193

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           I+I  LC  G L  A  +L  L   N   T + YT +I+A   EG V +A+    +M+ +
Sbjct: 194 IMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSR 253

Query: 583 GFEISIRDYT 592
           G +  +  Y 
Sbjct: 254 GLKPDMFTYN 263


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 156/595 (26%), Positives = 262/595 (44%), Gaps = 73/595 (12%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQE--------------------------TAGKEFGPS 97
           YT  ++IDGLC+  RL+DA   L E                           A K     
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337

Query: 98  VVSLNAIMSRY---------CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
           +VS    +  Y          K G  E AK LF  M+  GL P A +Y  LI G C   +
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           + +  E   +M +  +     TY  + KG      + GA+ ++++++  G  P++V YT 
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI  + Q     + +++ + M  QG   ++  Y+ L+  + K+ R+DEA   L EM   G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           LKP+  TY   I G  +  +   A +   EM    + PN      ++   C+K  + EA 
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             + S++    + D   Y ++++G  K   + +A +++R++  K I+P + ++  LI GF
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            K G +  A  + D +   GL P+ + Y   +  +C  G I++   LL EM  K + P  
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF----- 503
           VTY  +I G CK   L EA +L ++M + G+ PD   Y T++   C+  D+ +A      
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757

Query: 504 -----------------------------QLLNQMWLHNLE----PTSATYNILIDGLCV 530
                                        ++LN++   + +    P   TYNI+ID LC 
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            G+L+ A  L   +Q  N+  T + YT+++  +   G   +    F + +  G E
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 158/605 (26%), Positives = 277/605 (45%), Gaps = 56/605 (9%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSI 68
           + +AVFV +    L+L   +     LL  L      D+ WD+Y  +       +V T  +
Sbjct: 167 IEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHM 226

Query: 69  VIDGLCQQSRLQ--DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I   C+   +Q    +LF  E   KEF  + ++++         G  ++ + + C    
Sbjct: 227 LIIAHCRAGNVQLGKDVLFKTE---KEFRTATLNVD---------GALKLKESMIC---- 270

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL P  ++Y++LI GLC    +E+A     +M   GV  D  TYS+L  G         
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330

Query: 187 AWKVIQKLLIKGSD-----------------------------------PDIVTYTVLIC 211
           A  ++ +++  G +                                   P    Y  LI 
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           GYC+  NV +G +L   M  +   ++   Y  ++  MC SG +D A  ++ EM A G +P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           ++V Y+ LI+   +  +   A+++  EM  + I+P+ F + ++++GL + + + EAR + 
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             ++ +    +   Y   I GY++      A +  +++ E  + P+ V    LI  +CK 
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           GKV +A     ++   G+   A TYT  MN   +   +     + +EM  K I P   +Y
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            V+I G  K   +Q+A  + ++M   G+TP+ I YN ++  FC+  ++ KA +LL++M +
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             L P + TY  +IDG C +GDL  A  L   ++   +      YTT++   C   DV +
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750

Query: 572 AMTFF 576
           A+T F
Sbjct: 751 AITIF 755



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 144/577 (24%), Positives = 262/577 (45%), Gaps = 48/577 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           Y R   V     ++ +MK+ ++ +S  TY +++  +  +   D  +++  ++  S    N
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V   + +I    Q SR  DA+  L+E   +   P +   N+++    K    + A+    
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP---------------- 166
            M++ GL P+AF+Y   I G   A     A ++  +M   GV P                
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571

Query: 167 -------------------DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
                              DA TY++L  G     ++  A ++ +++  KG  PD+ +Y 
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           VLI G+ ++GN+++   + + M+ +G   NVI Y++LL   C+SG I++A  LL EM   
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL P+ VTY  +I G CK   + +A +L++EM  K + P+SF +  ++ G C    +  A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS----PSIVTFNS 383
              F +     C      +N +I+   K G      ++  +L++        P+ VT+N 
Sbjct: 752 ITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           +I   CK G +  A+ L   ++   L P+ +TYT+ +N Y + G    +  +  E     
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI-----TYNTIIRSFCKCKD 498
           I P H+ Y+V+I    K+    +A+ L++ M+      D       T   ++  F K  +
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
           +  A +++  M      P SAT   LI+  C++ + +
Sbjct: 931 MEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 155/593 (26%), Positives = 269/593 (45%), Gaps = 96/593 (16%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSV----VSLNAIMSRYCKLG-FAEVAKGLFC 122
           I+ DG   +  +++A+     + G E  P +    V L+A++ R+ +L  F +V KG   
Sbjct: 156 ILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL-RWNRLDLFWDVYKG--- 211

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M++  +  D  +Y++LI   C AG+++        +G+     D +  +   K F   +
Sbjct: 212 -MVERNVVFDVKTYHMLIIAHCRAGNVQ--------LGK-----DVLFKT--EKEFRTAT 255

Query: 183 -QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             + GA K+ + ++ KG  P   TY VLI G C+I  +E+   L   M S G  L+   Y
Sbjct: 256 LNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY 315

Query: 242 SVLLSSMCKSGRIDEALGLLYEME-----------------------------------A 266
           S+L+  + K    D A GL++EM                                    A
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA 375

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            GL P    Y+ LI G C++  V +  +L  EM  + I  + + +G ++ G+C    +  
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A      +I S C  +VV+Y  +I  +++    G+A+++ +++ E+ I+P I  +NSLI 
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF--------------------------- 419
           G  K  ++ +AR  L  +  +GL+P+A TY  F                           
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555

Query: 420 --------MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
                   +N YC++G +    +  + M  + I     TYTV++ GL K  K+ +A ++ 
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            +M   G+ PD  +Y  +I  F K  +++KA  + ++M    L P    YN+L+ G C +
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           G+++ A  LL  +    +    V Y TII  +C  GD+ +A   F +M  KG 
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 109/530 (20%), Positives = 200/530 (37%), Gaps = 128/530 (24%)

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG----LKPDLVTYSILIR 281
           R+ ++S    + +    VL  S+ +S R+D+   LL     V      +  L ++S L  
Sbjct: 48  RDTLVSSNLSIEINPEVVL--SVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLAL 105

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
            LC      KA+ +   M  +R  P +    +I+   C +E + ++              
Sbjct: 106 DLCNFGSFEKALSVVERMI-ERNWPVAEVWSSIVR--CSQEFVGKS-------------D 149

Query: 342 DVVLYNIMIDGYVKLGNIGEAV-----------------------------------QLY 366
           D VL+ I+ DGY+    I EAV                                    +Y
Sbjct: 150 DGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVA---------------------DARRLLDTIK 405
           + ++E+ +   + T++ LI   C+ G V                       A +L +++ 
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL------- 458
             GL P   TY   ++  C+   ++   +LL EM++  +   + TY+++I GL       
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329

Query: 459 ----------------------------CKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
                                        K+  +++A  L + M   G+ P    Y ++I
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             +C+ K++R+ ++LL +M   N+  +  TY  ++ G+C +GDL  A  ++  +      
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI---------------RDYTKSF 595
              V YTT+IK          AM    +M E+G    I                D  +SF
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
              M+ NG  P+       +  + +  +  S  +    M + G+LP+K L
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 139/297 (46%), Gaps = 15/297 (5%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIM--WDLYDDIKVS 57
           ML   + R+G +  A  ++ +M    L  +  TY +++    +  D+   + L+D++K+ 
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               + +  + ++DG C+ + ++ AI     T  K    S    NA+++   K G  E+ 
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELK 785

Query: 118 KGLFCLML-----KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
             +   ++     ++G  P+  +YNI+I  LC  G++E A E  + M    + P  ITY+
Sbjct: 786 TEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  G+  + + +  + V  + +  G +PD + Y+V+I  + + G   + L L + M ++
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904

Query: 233 -----GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
                G KL++     LLS   K G ++ A  ++  M  +   PD  T   LI   C
Sbjct: 905 NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 156/595 (26%), Positives = 262/595 (44%), Gaps = 73/595 (12%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQE--------------------------TAGKEFGPS 97
           YT  ++IDGLC+  RL+DA   L E                           A K     
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337

Query: 98  VVSLNAIMSRY---------CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
           +VS    +  Y          K G  E AK LF  M+  GL P A +Y  LI G C   +
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           + +  E   +M +  +     TY  + KG      + GA+ ++++++  G  P++V YT 
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI  + Q     + +++ + M  QG   ++  Y+ L+  + K+ R+DEA   L EM   G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           LKP+  TY   I G  +  +   A +   EM    + PN      ++   C+K  + EA 
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             + S++    + D   Y ++++G  K   + +A +++R++  K I+P + ++  LI GF
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            K G +  A  + D +   GL P+ + Y   +  +C  G I++   LL EM  K + P  
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF----- 503
           VTY  +I G CK   L EA +L ++M + G+ PD   Y T++   C+  D+ +A      
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757

Query: 504 -----------------------------QLLNQMWLHNLE----PTSATYNILIDGLCV 530
                                        ++LN++   + +    P   TYNI+ID LC 
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            G+L+ A  L   +Q  N+  T + YT+++  +   G   +    F + +  G E
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 160/611 (26%), Positives = 279/611 (45%), Gaps = 56/611 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y   G + +AVFV +    L+L   +     LL  L      D+ WD+Y  +       +
Sbjct: 161 YIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFD 220

Query: 63  VYTNSIVIDGLCQQSRLQ--DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           V T  ++I   C+   +Q    +LF  E   KEF  + ++++         G  ++ + +
Sbjct: 221 VKTYHMLIIAHCRAGNVQLGKDVLFKTE---KEFRTATLNVD---------GALKLKESM 268

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
            C     GL P  ++Y++LI GLC    +E+A     +M   GV  D  TYS+L  G   
Sbjct: 269 IC----KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324

Query: 181 LSQISGAWKVIQKLLIKGSD-----------------------------------PDIVT 205
                 A  ++ +++  G +                                   P    
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y  LI GYC+  NV +G +L   M  +   ++   Y  ++  MC SG +D A  ++ EM 
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
           A G +P++V Y+ LI+   +  +   A+++  EM  + I+P+ F + ++++GL + + + 
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EAR +   ++ +    +   Y   I GY++      A +  +++ E  + P+ V    LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
             +CK GKV +A     ++   G+   A TYT  MN   +   +     + +EM  K I 
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P   +Y V+I G  K   +Q+A  + ++M   G+TP+ I YN ++  FC+  ++ KA +L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           L++M +  L P + TY  +IDG C +GDL  A  L   ++   +      YTT++   C 
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744

Query: 566 EGDVHKAMTFF 576
             DV +A+T F
Sbjct: 745 LNDVERAITIF 755



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 144/577 (24%), Positives = 262/577 (45%), Gaps = 48/577 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           Y R   V     ++ +MK+ ++ +S  TY +++  +  +   D  +++  ++  S    N
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V   + +I    Q SR  DA+  L+E   +   P +   N+++    K    + A+    
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP---------------- 166
            M++ GL P+AF+Y   I G   A     A ++  +M   GV P                
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571

Query: 167 -------------------DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
                              DA TY++L  G     ++  A ++ +++  KG  PD+ +Y 
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           VLI G+ ++GN+++   + + M+ +G   NVI Y++LL   C+SG I++A  LL EM   
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL P+ VTY  +I G CK   + +A +L++EM  K + P+SF +  ++ G C    +  A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS----PSIVTFNS 383
              F +     C      +N +I+   K G      ++  +L++        P+ VT+N 
Sbjct: 752 ITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           +I   CK G +  A+ L   ++   L P+ +TYT+ +N Y + G    +  +  E     
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI-----TYNTIIRSFCKCKD 498
           I P H+ Y+V+I    K+    +A+ L++ M+      D       T   ++  F K  +
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
           +  A +++  M      P SAT   LI+  C++ + +
Sbjct: 931 MEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/577 (24%), Positives = 257/577 (44%), Gaps = 18/577 (3%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+G C++  ++     L E   +    S  +   ++   C  G  + A  +   M+  G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P+   Y  LI          +A+    +M   G+ PD   Y+ L  G     ++  A 
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
             + +++  G  P+  TY   I GY +        K  + M   G   N +  + L++  
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK G++ EA      M   G+  D  TY++L+ GL K DKV  A +++ EM  K I+P+ 
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F++G ++ G  +   + +A   FD ++      +V++YN+++ G+ + G I +A +L  +
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  K + P+ VT+ ++I G+CK+G +A+A RL D +KL GL P +  YTT ++  C   +
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747

Query: 429 IQRLLALLQEME---TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           ++R + +    +     +  P +     V K    + K +   +L++  +     P+ +T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YN +I   CK  +L  A +L +QM   NL PT  TY  L++G    G       +     
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
              I    + Y+ II A   EG   KA+    QM  K                 + +G  
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN---------------AVDDGCK 912

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                C  +L  F + G++    ++   M++   +PD
Sbjct: 913 LSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 155/593 (26%), Positives = 269/593 (45%), Gaps = 96/593 (16%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSV----VSLNAIMSRYCKLG-FAEVAKGLFC 122
           I+ DG   +  +++A+     + G E  P +    V L+A++ R+ +L  F +V KG   
Sbjct: 156 ILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL-RWNRLDLFWDVYKG--- 211

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M++  +  D  +Y++LI   C AG+++        +G+     D +  +   K F   +
Sbjct: 212 -MVERNVVFDVKTYHMLIIAHCRAGNVQ--------LGK-----DVLFKT--EKEFRTAT 255

Query: 183 -QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             + GA K+ + ++ KG  P   TY VLI G C+I  +E+   L   M S G  L+   Y
Sbjct: 256 LNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY 315

Query: 242 SVLLSSMCKSGRIDEALGLLYEME-----------------------------------A 266
           S+L+  + K    D A GL++EM                                    A
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA 375

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            GL P    Y+ LI G C++  V +  +L  EM  + I  + + +G ++ G+C    +  
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A      +I S C  +VV+Y  +I  +++    G+A+++ +++ E+ I+P I  +NSLI 
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF--------------------------- 419
           G  K  ++ +AR  L  +  +GL+P+A TY  F                           
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555

Query: 420 --------MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
                   +N YC++G +    +  + M  + I     TYTV++ GL K  K+ +A ++ 
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            +M   G+ PD  +Y  +I  F K  +++KA  + ++M    L P    YN+L+ G C +
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           G+++ A  LL  +    +    V Y TII  +C  GD+ +A   F +M  KG 
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 136/587 (23%), Positives = 238/587 (40%), Gaps = 89/587 (15%)

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D+FS+  L   LC  GS E+AL              ++   ++ + + +    S   +  
Sbjct: 98  DSFSF--LALDLCNFGSFEKAL--------------SVVERMIERNWPVAEVWSSIVRCS 141

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEE---------GLKL----------------- 225
           Q+ +  G   D V + +L  GY   G +EE         GL+L                 
Sbjct: 142 QEFV--GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRW 199

Query: 226 ---------REVMLSQGFKLNVIAYSVLLSSMCKSG---------------------RID 255
                     + M+ +    +V  Y +L+ + C++G                      +D
Sbjct: 200 NRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVD 259

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
            AL L   M   GL P   TY +LI GLCK  ++  A  L  EM S  +S ++  +  ++
Sbjct: 260 GALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            GL +      A+     ++         +Y+  I    K G + +A  L+  +I   + 
Sbjct: 320 DGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI 379

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P    + SLI G+C+   V     LL  +K   +  S  TY T +   C  G++     +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           ++EM      P  V YT +IK   +  +  +A+++L++M   G+ PD   YN++I    K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
            K + +A   L +M  + L+P + TY   I G     +  +AD  +  ++E  +   KV 
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMML 600
            T +I  +C +G V +A + +  MV++G     + YT               +  F  M 
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             G  PD     V++  F + G++     +   M++ GL P+  + N
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 110/530 (20%), Positives = 201/530 (37%), Gaps = 128/530 (24%)

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG----LKPDLVTYSILIR 281
           R+ ++S    + +    VL  S+ +S R+D+   LL     V      +  L ++S L  
Sbjct: 48  RDTLVSSNLSIEINPEVVL--SVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLAL 105

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
            LC      KA+ +   M  +R  P +    +I+   C +E + ++              
Sbjct: 106 DLCNFGSFEKALSVVERMI-ERNWPVAEVWSSIVR--CSQEFVGKS-------------D 149

Query: 342 DVVLYNIMIDGYVKLGNIGEAV-----------------------------------QLY 366
           D VL+ I+ DGY+  G I EAV                                    +Y
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVA---------------------DARRLLDTIK 405
           + ++E+ +   + T++ LI   C+ G V                       A +L +++ 
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL------- 458
             GL P   TY   ++  C+   ++   +LL EM++  +   + TY+++I GL       
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329

Query: 459 ----------------------------CKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
                                        K+  +++A  L + M   G+ P    Y ++I
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             +C+ K++R+ ++LL +M   N+  +  TY  ++ G+C +GDL  A  ++  +      
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI---------------RDYTKSF 595
              V YTT+IK          AM    +M E+G    I                D  +SF
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
              M+ NG  P+       +  + +  +  S  +    M + G+LP+K L
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 139/297 (46%), Gaps = 15/297 (5%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIM--WDLYDDIKVS 57
           ML   + R+G +  A  ++ +M    L  +  TY +++    +  D+   + L+D++K+ 
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               + +  + ++DG C+ + ++ AI     T  K    S    NA+++   K G  E+ 
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELK 785

Query: 118 KGLFCLML-----KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
             +   ++     ++G  P+  +YNI+I  LC  G++E A E  + M    + P  ITY+
Sbjct: 786 TEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  G+  + + +  + V  + +  G +PD + Y+V+I  + + G   + L L + M ++
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904

Query: 233 -----GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
                G KL++     LLS   K G ++ A  ++  M  +   PD  T   LI   C
Sbjct: 905 NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 262/541 (48%), Gaps = 5/541 (0%)

Query: 16  VFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRNVYTNSIVIDG 72
           + V  KM    L   ++  N +L  LR  +++    ++Y  ++       V T + ++D 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
            C++ R+  A+  L E   +   P+ V+ N +++   K G  E AKGL   ML  GL+  
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
           A++YN LI+G C  G   EA +   +M      P   TY+ L  G     Q++G      
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
            +L     PDIV++  L+ GYC+ G + E   L + +  +     VI Y+ L+  +C  G
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            +D AL L  EM   GL PD+ TY+IL+ G  K   V  A   +NEM SK + P+ FA+ 
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
             ++G  +    + A    + ++ +    DV+ YN+ +    + GN  EA  L   ++  
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            + P  VT+ S+I GF KNG +  AR + + +   G+ PS VTYT  ++A+  +  +   
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLA 584

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
                +M  K++    +TY  +I GLC   ++ EA +  ++M   G+ P++ +Y  +I  
Sbjct: 585 FMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINE 644

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL--LVSLQEHNIS 550
            C      +A +L  +M    ++P S T+++ +  L  +  +    C+  L+   E NI+
Sbjct: 645 SCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNVEDNIN 704

Query: 551 L 551
           +
Sbjct: 705 V 705



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 243/482 (50%), Gaps = 4/482 (0%)

Query: 92  KEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
           ++FG  P+VV+ N ++  YCK G  + A  L   M + G +P+  +YN+L++GL   G +
Sbjct: 207 EQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGEL 266

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           E+A     +M   G+   A TY+ L  GF        A+ ++++++ + + P + TY  L
Sbjct: 267 EQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTL 326

Query: 210 ICGYCQIGNVEEGLKLR-EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           + G C+   V  G++LR   ML   F  ++++++ LL   C++G I EA  L  E++   
Sbjct: 327 MYGLCKWVQVT-GVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           L P ++TY+ LI GLC    +  A++L  EM  + + P+ F +  ++ G  +   ++ AR
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
            +F+ ++      D   YN  I G +K+ +   A  +  +++     P ++T+N  ++  
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C+ G   +A  LL+ +   GL P  VTYT+ +N + + G++++   +  EM +K + P+ 
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VTYTV+I     +  L  A      M    V  + ITYN II   C  + + +A++  ++
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    + P   +Y ILI+  C  G  + A  L   + +  I      ++  +K    +  
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQ 685

Query: 569 VH 570
           VH
Sbjct: 686 VH 687



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 129/501 (25%), Positives = 241/501 (48%), Gaps = 2/501 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V + N I+           AK ++ +M ++G+ P   +YN ++   C  G +++ALE 
Sbjct: 178 PDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALEL 237

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            ++M   G  P+ +TY++L  G     ++  A  +I+++L  G +    TY  LI G+CQ
Sbjct: 238 LSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQ 297

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G   E   L E M+++     +  Y+ L+  +CK  ++        +M      PD+V+
Sbjct: 298 KGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVS 357

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ L+ G C+   + +A  L++E+  + + P    +  ++ GLC    +  A      + 
Sbjct: 358 FNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMT 417

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D+  Y I+++G  KLG +  A   + +++ K + P    +N+ I G  K    +
Sbjct: 418 DQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTS 477

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  + + +   G  P  +TY  F++A C++GN +    LL+ M +  + P HVTYT +I
Sbjct: 478 VAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSII 537

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G  K   L++A ++  +M   GV P  +TY  +I +    + L  AF   ++M   ++ 
Sbjct: 538 NGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVP 597

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
               TYN +I+GLC+   +  A      ++E  I   K +YT +I   C  G   +A+  
Sbjct: 598 ANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRL 657

Query: 576 FCQMVEKGFEISIRDYTKSFF 596
           + +M+++  +I    +T S F
Sbjct: 658 YREMLDR--KIQPDSFTHSVF 676



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 231/473 (48%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F  M++ GL PD  + N ++  L     + +A      M + G++P  +TY+ +   + 
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A +++ ++  +G  P+ VTY VL+ G  + G +E+   L E ML+ G  ++  
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L++  C+ G   EA  L+ EM      P L TY+ L+ GLCK  +V      +++M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
              + +P+  +  ++L G C    I+EA + FD L   + +  V+ YN +I G    G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A++L +++ ++ + P I T+  L+ G  K G V+ AR   + +   GL+P    Y T 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +    +  +     ++ +EM      P  +TY V +  LC+Q   +EA  LLE+M   G+
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD +TY +II  F K   LRKA ++ N+M    + P+  TY +LI        L  A  
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
               + E ++    + Y  II   C    + +A  +F +M EKG   +   YT
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYT 639



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 210/417 (50%), Gaps = 3/417 (0%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNV 63
           S+ G +  A  +I +M    L VS  TYN L+       +    +DL +++        +
Sbjct: 261 SKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTL 320

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + ++ GLC+  ++    L   +    +F P +VS N+++  YC+ G    A  LF  
Sbjct: 321 STYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDE 380

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +    L P   +YN LIHGLC+ G ++ AL    +M   G+ PD  TY+IL  G   L  
Sbjct: 381 LKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGY 440

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +S A     ++L KG  PD   Y   I G  +I +      ++E ML+ GF  +VI Y+V
Sbjct: 441 VSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNV 500

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
            + ++C+ G  +EA  LL  M + GL PD VTY+ +I G  K   + KA +++NEM SK 
Sbjct: 501 FVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKG 560

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++P+   +  ++     K+M+  A MYF  ++  +   +V+ YN +I+G      + EA 
Sbjct: 561 VAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAY 620

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           + + ++ EK I P+  ++  LI   C  G   +A RL   +    ++P + T++ F+
Sbjct: 621 KYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL 677



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 231/472 (48%), Gaps = 4/472 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y + G V  A+ ++++M+E     +  TYN L+  L     +     L +++  S    +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            YT + +I+G CQ+    +A   ++E   +   P++ + N +M   CK       +  F 
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            MLK    PD  S+N L++G C  G + EA    +++    + P  ITY+ L  G  +  
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A ++ +++  +G  PDI TYT+L+ G  ++G V         MLS+G K +  AY+
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             +    K      A  +  EM A G  PD++TY++ +  LC+Q    +A  L   M S 
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   + +I+ G  +   + +AR  F+ ++       VV Y ++I  +     +  A
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLA 584

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
              + +++EK +  +++T+N++I G C   ++ +A +  D ++  G+ P+  +YT  +N 
Sbjct: 585 FMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINE 644

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            C  G  +  L L +EM  + I P   T++V +K L + +++  AVQ +E +
Sbjct: 645 SCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH-AVQCVESL 695



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 161/324 (49%), Gaps = 11/324 (3%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYD---DIKVSE 58
           L + Y RTG + +A  +  ++K  DL  ++ TYN+L++ L     MW   D    +K   
Sbjct: 361 LLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL----CMWGYLDAALRLKKEM 416

Query: 59  TPR----NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           T +    +++T +I+++G  +   +  A  F  E   K   P   + N  +    K+   
Sbjct: 417 TDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADT 476

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
            VA  +   ML  G  PD  +YN+ +H LC  G+ EEA +   +M   G+ PD +TY+ +
Sbjct: 477 SVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSI 536

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             GF     +  A +V  ++L KG  P +VTYTVLI  +     ++        ML +  
Sbjct: 537 INGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSV 596

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             NVI Y+ +++ +C + R+DEA     EME  G+ P+  +Y+ILI   C      +A++
Sbjct: 597 PANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALR 656

Query: 295 LYNEMCSKRISPNSFAHGAILLGL 318
           LY EM  ++I P+SF H   L  L
Sbjct: 657 LYREMLDRKIQPDSFTHSVFLKNL 680



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 182/384 (47%), Gaps = 32/384 (8%)

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           ME  G+KP +VTY+ ++   CK+ +V +A++L +EM  +   PN   +  ++ GL +K  
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           + +A+   + ++ S        YN +I+G+ + G   EA  L  +++ +R  P++ T+N+
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNT 325

Query: 384 LIYGFCKNGKVADAR-RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           L+YG CK  +V   R R  D +K     P  V++ + +  YC  G I     L  E++ +
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLK-SKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR 384

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + PT +TY  +I GLC    L  A++L ++M   G+ PD  TY  ++    K   +  A
Sbjct: 385 DLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMA 444

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD-CLLVSLQEHNISL----TKVAYT 557
               N+M    L+P    YN  I G     ++K AD  +  S+QE  ++       + Y 
Sbjct: 445 RGFFNEMLSKGLKPDRFAYNTRIVG-----EMKIADTSVAFSMQEEMLAAGFPPDVITYN 499

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIA 617
             + A C +G+  +A    C ++E                 M+S+G  PD      ++  
Sbjct: 500 VFVHALCQQGNFEEA----CDLLEN----------------MVSDGLIPDHVTYTSIING 539

Query: 618 FHQGGDLGSVFELAAVMIKSGLLP 641
           F + G L    E+   M+  G+ P
Sbjct: 540 FVKNGHLRKAREVFNEMLSKGVAP 563



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 166/349 (47%), Gaps = 22/349 (6%)

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           ++++M    + P+      IL  L ++ ++++A+  +  +        VV YN M+D Y 
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K G + +A++L  ++ E+   P+ VT+N L+ G  K G++  A+ L++ +   GL  SA 
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL-LED 473
           TY   +N +C++G       L++EM  +   PT  TY  ++ GLCK W     V+L   D
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCK-WVQVTGVRLRFSD 345

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M     TPD +++N+++  +C+   + +AF L +++   +L PT  TYN LI GLC+ G 
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           L  A  L   + +  +      YT ++                C      F++      +
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNG--------------C------FKLGYVSMAR 445

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            FF  MLS G  PD+      ++   +  D    F +   M+ +G  PD
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPD 494



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 160/375 (42%), Gaps = 20/375 (5%)

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL PD+   + ++R L  ++ + KA  +Y  M    I P    +  +L   C++  + +A
Sbjct: 175 GLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQA 234

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                 +    C  + V YN++++G  K G + +A  L  +++   ++ S  T+N LI G
Sbjct: 235 LELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLING 294

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           FC+ G   +A  L++ +      P+  TY T M   C+   +  +     +M      P 
Sbjct: 295 FCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPD 354

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            V++  ++ G C+   + EA  L +++    + P  ITYNT+I   C    L  A +L  
Sbjct: 355 IVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKK 414

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M    L P   TY IL++G    G +  A      +    +   + AY T I       
Sbjct: 415 EMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIA 474

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           D   A +    M E+                ML+ GFPPD     V + A  Q G+    
Sbjct: 475 DTSVAFS----MQEE----------------MLAAGFPPDVITYNVFVHALCQQGNFEEA 514

Query: 628 FELAAVMIKSGLLPD 642
            +L   M+  GL+PD
Sbjct: 515 CDLLENMVSDGLIPD 529


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 262/541 (48%), Gaps = 5/541 (0%)

Query: 16  VFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRNVYTNSIVIDG 72
           + V  KM    L   ++  N +L  LR  +++    ++Y  ++       V T + ++D 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
            C++ R+  A+  L E   +   P+ V+ N +++   K G  E AKGL   ML  GL+  
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
           A++YN LI+G C  G   EA +   +M      P   TY+ L  G     Q++G      
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
            +L     PDIV++  L+ GYC+ G + E   L + +  +     VI Y+ L+  +C  G
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            +D AL L  EM   GL PD+ TY+IL+ G  K   V  A   +NEM SK + P+ FA+ 
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
             ++G  +    + A    + ++ +    DV+ YN+ +    + GN  EA  L   ++  
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            + P  VT+ S+I GF KNG +  AR + + +   G+ PS VTYT  ++A+  +  +   
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLA 584

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
                +M  K++    +TY  +I GLC   ++ EA +  ++M   G+ P++ +Y  +I  
Sbjct: 585 FMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINE 644

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL--LVSLQEHNIS 550
            C      +A +L  +M    ++P S T+++ +  L  +  +    C+  L+   E NI+
Sbjct: 645 SCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNVEDNIN 704

Query: 551 L 551
           +
Sbjct: 705 V 705



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 250/502 (49%), Gaps = 6/502 (1%)

Query: 92  KEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
           ++FG  P+VV+ N ++  YCK G  + A  L   M + G +P+  +YN+L++GL   G +
Sbjct: 207 EQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGEL 266

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           E+A     +M   G+   A TY+ L  GF        A+ ++++++ + + P + TY  L
Sbjct: 267 EQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTL 326

Query: 210 ICGYCQIGNVEEGLKLR-EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           + G C+   V  G++LR   ML   F  ++++++ LL   C++G I EA  L  E++   
Sbjct: 327 MYGLCKWVQVT-GVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           L P ++TY+ LI GLC    +  A++L  EM  + + P+ F +  ++ G  +   ++ AR
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
            +F+ ++      D   YN  I G +K+ +   A  +  +++     P ++T+N  ++  
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C+ G   +A  LL+ +   GL P  VTYT+ +N + + G++++   +  EM +K + P+ 
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VTYTV+I     +  L  A      M    V  + ITYN II   C  + + +A++  ++
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    + P   +Y ILI+  C  G  + A  L   + +  I      ++  +K    +  
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQ 685

Query: 569 VH--KAMTFFCQMVEKGFEISI 588
           VH  + +    Q VE    + I
Sbjct: 686 VHAVQCVESLIQNVEDNINVRI 707



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 231/473 (48%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F  M++ GL PD  + N ++  L     + +A      M + G++P  +TY+ +   + 
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A +++ ++  +G  P+ VTY VL+ G  + G +E+   L E ML+ G  ++  
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L++  C+ G   EA  L+ EM      P L TY+ L+ GLCK  +V      +++M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
              + +P+  +  ++L G C    I+EA + FD L   + +  V+ YN +I G    G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A++L +++ ++ + P I T+  L+ G  K G V+ AR   + +   GL+P    Y T 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +    +  +     ++ +EM      P  +TY V +  LC+Q   +EA  LLE+M   G+
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD +TY +II  F K   LRKA ++ N+M    + P+  TY +LI        L  A  
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
               + E ++    + Y  II   C    + +A  +F +M EKG   +   YT
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYT 639



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 210/417 (50%), Gaps = 3/417 (0%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR---NV 63
           S+ G +  A  +I +M    L VS  TYN L+       +  + +D ++     R    +
Sbjct: 261 SKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTL 320

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + ++ GLC+  ++    L   +    +F P +VS N+++  YC+ G    A  LF  
Sbjct: 321 STYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDE 380

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +    L P   +YN LIHGLC+ G ++ AL    +M   G+ PD  TY+IL  G   L  
Sbjct: 381 LKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGY 440

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +S A     ++L KG  PD   Y   I G  +I +      ++E ML+ GF  +VI Y+V
Sbjct: 441 VSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNV 500

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
            + ++C+ G  +EA  LL  M + GL PD VTY+ +I G  K   + KA +++NEM SK 
Sbjct: 501 FVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKG 560

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++P+   +  ++     K+M+  A MYF  ++  +   +V+ YN +I+G      + EA 
Sbjct: 561 VAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAY 620

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           + + ++ EK I P+  ++  LI   C  G   +A RL   +    ++P + T++ F+
Sbjct: 621 KYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL 677



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 231/472 (48%), Gaps = 4/472 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y + G V  A+ ++++M+E     +  TYN L+  L     +     L +++  S    +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            YT + +I+G CQ+    +A   ++E   +   P++ + N +M   CK       +  F 
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            MLK    PD  S+N L++G C  G + EA    +++    + P  ITY+ L  G  +  
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A ++ +++  +G  PDI TYT+L+ G  ++G V         MLS+G K +  AY+
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             +    K      A  +  EM A G  PD++TY++ +  LC+Q    +A  L   M S 
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   + +I+ G  +   + +AR  F+ ++       VV Y ++I  +     +  A
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLA 584

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
              + +++EK +  +++T+N++I G C   ++ +A +  D ++  G+ P+  +YT  +N 
Sbjct: 585 FMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINE 644

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            C  G  +  L L +EM  + I P   T++V +K L + +++  AVQ +E +
Sbjct: 645 SCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH-AVQCVESL 695



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 161/324 (49%), Gaps = 11/324 (3%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYD---DIKVSE 58
           L + Y RTG + +A  +  ++K  DL  ++ TYN+L++ L     MW   D    +K   
Sbjct: 361 LLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL----CMWGYLDAALRLKKEM 416

Query: 59  TPR----NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           T +    +++T +I+++G  +   +  A  F  E   K   P   + N  +    K+   
Sbjct: 417 TDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADT 476

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
            VA  +   ML  G  PD  +YN+ +H LC  G+ EEA +   +M   G+ PD +TY+ +
Sbjct: 477 SVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSI 536

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             GF     +  A +V  ++L KG  P +VTYTVLI  +     ++        ML +  
Sbjct: 537 INGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSV 596

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             NVI Y+ +++ +C + R+DEA     EME  G+ P+  +Y+ILI   C      +A++
Sbjct: 597 PANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALR 656

Query: 295 LYNEMCSKRISPNSFAHGAILLGL 318
           LY EM  ++I P+SF H   L  L
Sbjct: 657 LYREMLDRKIQPDSFTHSVFLKNL 680



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 182/384 (47%), Gaps = 32/384 (8%)

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           ME  G+KP +VTY+ ++   CK+ +V +A++L +EM  +   PN   +  ++ GL +K  
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           + +A+   + ++ S        YN +I+G+ + G   EA  L  +++ +R  P++ T+N+
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNT 325

Query: 384 LIYGFCKNGKVADAR-RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           L+YG CK  +V   R R  D +K     P  V++ + +  YC  G I     L  E++ +
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLK-SKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR 384

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + PT +TY  +I GLC    L  A++L ++M   G+ PD  TY  ++    K   +  A
Sbjct: 385 DLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMA 444

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC-LLVSLQEHNISL----TKVAYT 557
               N+M    L+P    YN  I G     ++K AD  +  S+QE  ++       + Y 
Sbjct: 445 RGFFNEMLSKGLKPDRFAYNTRIVG-----EMKIADTSVAFSMQEEMLAAGFPPDVITYN 499

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIA 617
             + A C +G+  +A    C ++E                 M+S+G  PD      ++  
Sbjct: 500 VFVHALCQQGNFEEA----CDLLEN----------------MVSDGLIPDHVTYTSIING 539

Query: 618 FHQGGDLGSVFELAAVMIKSGLLP 641
           F + G L    E+   M+  G+ P
Sbjct: 540 FVKNGHLRKAREVFNEMLSKGVAP 563



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 166/349 (47%), Gaps = 22/349 (6%)

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           ++++M    + P+      IL  L ++ ++++A+  +  +        VV YN M+D Y 
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K G + +A++L  ++ E+   P+ VT+N L+ G  K G++  A+ L++ +   GL  SA 
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL-LED 473
           TY   +N +C++G       L++EM  +   PT  TY  ++ GLCK W     V+L   D
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCK-WVQVTGVRLRFSD 345

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M     TPD +++N+++  +C+   + +AF L +++   +L PT  TYN LI GLC+ G 
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           L  A  L   + +  +      YT ++                C      F++      +
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNG--------------C------FKLGYVSMAR 445

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            FF  MLS G  PD+      ++   +  D    F +   M+ +G  PD
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPD 494



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 160/375 (42%), Gaps = 20/375 (5%)

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL PD+   + ++R L  ++ + KA  +Y  M    I P    +  +L   C++  + +A
Sbjct: 175 GLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQA 234

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                 +    C  + V YN++++G  K G + +A  L  +++   ++ S  T+N LI G
Sbjct: 235 LELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLING 294

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           FC+ G   +A  L++ +      P+  TY T M   C+   +  +     +M      P 
Sbjct: 295 FCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPD 354

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            V++  ++ G C+   + EA  L +++    + P  ITYNT+I   C    L  A +L  
Sbjct: 355 IVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKK 414

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M    L P   TY IL++G    G +  A      +    +   + AY T I       
Sbjct: 415 EMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIA 474

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           D   A +    M E+                ML+ GFPPD     V + A  Q G+    
Sbjct: 475 DTSVAFS----MQEE----------------MLAAGFPPDVITYNVFVHALCQQGNFEEA 514

Query: 628 FELAAVMIKSGLLPD 642
            +L   M+  GL+PD
Sbjct: 515 CDLLENMVSDGLIPD 529


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 217/402 (53%), Gaps = 3/402 (0%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           + +LI      G +EEAL     M    V P     +++  G     +    WKV   ++
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
            +G+ P++VTY  LI G C+ G+  +  +L + M+ +     V+ Y++L+  +C   RI 
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           EA  +   M   G+ P+L TY+ ++ G CK   V KA++LY EM    + PN    G ++
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILI 305

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            GLC+ + +  AR +   +     + ++ +YN +IDGY K GN+ EA+ L+ ++ +  I 
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P + T++ LI G C   ++ +A  LL  +K  G  P+AVTY T ++ YC+EGN+++ + +
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
             +M  K I P  +T++ +I G CK  K++ A+ L  +M + G+ PD + Y  +I    K
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
             + ++AF+L  +M    L P   T + LIDGLC +G + +A
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 223/405 (55%), Gaps = 13/405 (3%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI----AYSV 243
           + V+ +L      P++  + VLI  + ++G VEE L +        +K++V+    A ++
Sbjct: 113 FNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVY-------YKMDVLPAMQACNM 163

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +L  + K GR D    +  +M A G  P++VTY  LI G C+Q    KA +L++EM  K+
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I P    +  ++ GLC +  I+EA   F ++  S  + ++  YN M+DGY K+ ++ +A+
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +LY++++   + P++VTF  LI G CK  ++  AR+ L  +   G+ P+   Y   ++ Y
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ GN+   L+L  E+E   I P   TY+++IKGLC   +++EA  LL++M   G  P+ 
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TYNT+I  +CK  ++ KA ++ +QM    +EP   T++ LIDG C  G ++ A  L   
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           +    +    VAYT +I  H  +G+  +A     +M E G   ++
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNV 508



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 209/404 (51%), Gaps = 6/404 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVS 57
           +L   +S  G+V +A++V  KM   D+  ++Q  N +L  L      D MW +Y D+   
Sbjct: 131 VLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVAR 187

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NV T   +IDG C+Q     A     E   K+  P+VV    ++   C       A
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEA 247

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + +F  M   G+ P+ ++YN ++ G C    +++ALE   +M   G+ P+ +T+ IL  G
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDG 307

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A K +  +   G  P+I  Y  LI GYC+ GN+ E L L   +       +
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V  YS+L+  +C   R++EA GLL EM+  G  P+ VTY+ LI G CK+  + KAI++ +
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M  K I PN      ++ G C+   +  A   +  +++   + DVV Y  +IDG+ K G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           N  EA +L++++ E  + P++ T + LI G CK+G+++DA +L 
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 204/376 (54%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P++ + N ++    K G  +    ++  M+  G  P+  +Y  LI G C  G   +A   
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            ++M    + P  + Y+IL +G    S+IS A  + + +   G  P++ TY  ++ GYC+
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           I +V++ L+L + ML  G   NV+ + +L+  +CK+  +  A   L +M + G+ P++  
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G CK   + +A+ L++E+    I P+ F +  ++ GLC  + + EA      + 
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
               + + V YN +IDGY K GN+ +A+++  Q+ EK I P+I+TF++LI G+CK GK+ 
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L   + + GL P  V YT  ++ + ++GN +    L +EM+   + P   T + +I
Sbjct: 456 AAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515

Query: 456 KGLCKQWKLQEAVQLL 471
            GLCK  ++ +A++L 
Sbjct: 516 DGLCKDGRISDAIKLF 531



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 207/421 (49%), Gaps = 5/421 (1%)

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
           L      +F P+V     ++  + ++G  E A  ++    K  + P   + N+++ GL  
Sbjct: 116 LSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVY---YKMDVLPAMQACNMVLDGLVK 170

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
            G  +   +   DM   G  P+ +TY  L  G         A+++  +++ K   P +V 
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           YT+LI G C    + E   +   M + G   N+  Y+ ++   CK   + +AL L  EM 
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             GL P++VT+ ILI GLCK D++  A +   +M S  + PN F +  ++ G C+   ++
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA      +     + DV  Y+I+I G   +  + EA  L +++ +K   P+ VT+N+LI
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G+CK G +  A  +   +   G+EP+ +T++T ++ YC+ G ++  + L  EM  K + 
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  V YT +I G  K    +EA +L ++M   G+ P+  T + +I   CK   +  A +L
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530

Query: 506 L 506
            
Sbjct: 531 F 531



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 205/469 (43%), Gaps = 101/469 (21%)

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C + NV   L+      S  F  NV  + VL+ +  + G ++EAL + Y+M+ +   P +
Sbjct: 110 CSVFNVLSRLE------SSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMDVL---PAM 158

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
              ++++ GL K+ +     ++Y +M ++  SPN                          
Sbjct: 159 QACNMVLDGLVKKGRFDTMWKVYGDMVARGASPN-------------------------- 192

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
                    VV Y  +IDG  + G+  +A +L+ ++IEK+I P++V +  LI G C   +
Sbjct: 193 ---------VVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           +++A  +  T++  G+ P+  TY T M+ YC+  ++++ L L QEM    + P  VT+ +
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL-------- 505
           +I GLCK  ++  A + L DM   GV P+   YN +I  +CK  +L +A  L        
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 506 ---------------------------LNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
                                      L +M      P + TYN LIDG C  G+++ A 
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            +   + E  I    + ++T+I  +C  G +  AM  + +MV KG    +  YT      
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYT------ 477

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                          ++    + G+    F L   M ++GL P+ F ++
Sbjct: 478 --------------ALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLS 512



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 120/585 (20%), Positives = 231/585 (39%), Gaps = 85/585 (14%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y + G + +A+ + +++++ ++   + TY+ L+  L   D M +   L  ++K      N
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +IDG C++  ++ AI    +   K   P++++ + ++  YCK G  E A GL+ 
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+  GL PD  +Y  LI G    G+ +EA     +M   G+ P+  T S L  G     
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522

Query: 183 QISGAWKV--------------------------------------------IQKLLIKG 198
           +IS A K+                                            + KL    
Sbjct: 523 RISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATN 582

Query: 199 SDPDIVTYTVL--------ICGYCQIGNVEEGLKLREVMLSQ------GFKLNVIAYSVL 244
           + P    +T L        +  Y Q  N  + L    ++L +       F L     +  
Sbjct: 583 NQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACT 642

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L S    G+   AL + +     G +P +   + LI        V  A  +++E+ SK  
Sbjct: 643 LKSSLVEGKQMHALVINF-----GFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSK-- 695

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG--NIGEA 362
             N  +  +++    + +   +A   F  + M +   D+V   + +     LG  ++GE 
Sbjct: 696 --NLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEW 753

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +  Y  +  + +   +   NSLI  + K G++  ARR    +      P+ VT+   + A
Sbjct: 754 IHAY--IRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVL------PNDVTFMGVLMA 805

Query: 423 YCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
               G ++      + M E  ++ P    +  ++  LC+   L EA + +  M    V P
Sbjct: 806 CSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM---PVRP 862

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           + + + T++ + C  + +     L+        +P  ++  + ID
Sbjct: 863 NAVVWRTLLGA-CSLQGMWDKKMLVRNQIKQRRDPGCSSIEVGID 906


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 153/553 (27%), Positives = 266/553 (48%), Gaps = 26/553 (4%)

Query: 110 KLGFAEVAKGLFCLMLKYG--LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           K    + A+ +  LM + G  L P+AF   ++ +    AG +  AL     M + GVEP+
Sbjct: 208 KTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSR--AGKLRNALRVLTLMQKAGVEPN 265

Query: 168 ----AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
                 T  +L KG     ++  A + ++++ + G  PDIVTY  LI GYC +  +E+ L
Sbjct: 266 LSICNTTIYVLVKG----CKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDAL 321

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRG 282
           +L   + S+G   + ++Y  ++  +CK  +I++   L+ +M +   L PD VTY+ LI  
Sbjct: 322 ELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHM 381

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           L K      A+    E   K    +   + AI+   C+K  + EA+     +   +C  D
Sbjct: 382 LSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPD 441

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           VV Y  ++DG+ +LG I EA ++ +Q+ +    P+ V++ +L+ G C +GK  +AR +++
Sbjct: 442 VVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMIN 501

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
             + H   P+A+TY   M+ +  EG +     L +EM  K   PT V   ++I+ LC+  
Sbjct: 502 VSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQ 561

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           K+ EA + LE+    G   + + + T+I  FC+  D+  A  +L  M+L N  P + TY 
Sbjct: 562 KVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYT 621

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            L D L   G L  A  L+V +    +  T V + ++I  +C  G V   +    +MV++
Sbjct: 622 ALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR 681

Query: 583 GFEISIRDYTKSFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
               +I ++     C              +L      D   C V++ +  + G   S ++
Sbjct: 682 KPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYK 741

Query: 630 LAAVMIKSGLLPD 642
           +A  M +  L PD
Sbjct: 742 VACQMFRRNLTPD 754



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 266/551 (48%), Gaps = 12/551 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           YSR G + +A+ V+  M++  ++ ++   N+ +Y L      +      + ++V+    +
Sbjct: 241 YSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPD 300

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T + +I G C  +R++DA+  +     K   P  VS   +M   CK    E  K   C
Sbjct: 301 IVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVK---C 357

Query: 123 LMLKY----GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
           LM K      L PD  +YN LIH L   G  ++AL F  +    G   D + YS +   F
Sbjct: 358 LMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSF 417

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               ++  A  ++  +  +  +PD+VTYT ++ G+C++G ++E  K+ + M   G K N 
Sbjct: 418 CQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNT 477

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           ++Y+ LL+ +C SG+  EA  ++   E     P+ +TY +++ G  ++ K+ +A  L  E
Sbjct: 478 VSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTRE 537

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  K   P       ++  LC+ + + EA+ Y +  +   C  +VV +  +I G+ ++G+
Sbjct: 538 MVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGD 597

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +  A+ +   +      P  VT+ +L     K G++ +A  L+  +   GL+P+ VT+ +
Sbjct: 598 MEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRS 657

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++ YC+ G +  +L LL  M  +   P    Y  VI+ LC    L+EA +LL  +    
Sbjct: 658 VIHRYCQWGRVDDMLNLLDRMVKRK--PFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTA 715

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
              D  T + ++ S  K      A+++  QM+  NL P       +   L ++G+L  AD
Sbjct: 716 SKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEAD 775

Query: 539 CLLVSLQEHNI 549
            L++   E  I
Sbjct: 776 KLMLRFVERGI 786



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 182/398 (45%), Gaps = 45/398 (11%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W+     L+  +  D+++ T L  G           ++  +M  +G +L+  A+  ++ S
Sbjct: 190 WRYSHHPLVYYTLLDVLSKTKLCQG---------ARRVLRLMTRRGIELSPEAFGCVMVS 240

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
             ++G++  AL +L  M+  G++P+L   +  I  L K  K+ KA++    M    I P 
Sbjct: 241 YSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKP- 299

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
                                             D+V YN +I GY  L  I +A++L  
Sbjct: 300 ----------------------------------DIVTYNSLIKGYCDLNRIEDALELIA 325

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT-IKLHGLEPSAVTYTTFMNAYCEE 426
            L  K   P  V++ +++   CK  K+   + L++  ++   L P  VTY T ++   + 
Sbjct: 326 GLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKH 385

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G+    LA L+E E K      V Y+ ++   C++ ++ EA  L+ DMY     PD +TY
Sbjct: 386 GHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTY 445

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
             I+  FC+   + +A ++L QM+ H  +P + +Y  L++GLC +G    A  ++   +E
Sbjct: 446 TAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEE 505

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           H  +   + Y  ++     EG + +A     +MVEKGF
Sbjct: 506 HWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGF 543



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 121/250 (48%), Gaps = 1/250 (0%)

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           ++Y  ++D   K      A ++ R +  + I  S   F  ++  + + GK+ +A R+L  
Sbjct: 197 LVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTL 256

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           ++  G+EP+     T +    +   +++ L  L+ M+   I P  VTY  +IKG C   +
Sbjct: 257 MQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNR 316

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL-HNLEPTSATYN 522
           +++A++L+  +   G  PD+++Y T++   CK K + +   L+ +M    NL P   TYN
Sbjct: 317 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYN 376

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            LI  L  +G   +A   L   ++    + KV Y+ I+ + C +G + +A +    M  +
Sbjct: 377 TLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 436

Query: 583 GFEISIRDYT 592
                +  YT
Sbjct: 437 SCNPDVVTYT 446



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 120/286 (41%), Gaps = 16/286 (5%)

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
           R S   + + +L+    K      ARR+L  +   G+E S   +   M +Y   G ++  
Sbjct: 191 RYSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNA 250

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L +L  M+   + P        I  L K  KL++A++ LE M V G+ PD +TYN++I+ 
Sbjct: 251 LRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKG 310

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL-QEHNISL 551
           +C    +  A +L+  +      P   +Y  ++  LC    ++   CL+  + Q+ N+  
Sbjct: 311 YCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIP 370

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFF 596
            +V Y T+I      G    A+ F  +  +KGF I    Y+               KS  
Sbjct: 371 DQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLV 430

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             M S    PD      ++  F + G +    ++   M K G  P+
Sbjct: 431 IDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPN 476


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 254/496 (51%), Gaps = 14/496 (2%)

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           LG    +  +F  +LK G   D  + N ++ GLC+ G + +ALEF +++  +G   + ++
Sbjct: 85  LGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVS 144

Query: 171 YSILAKGFHLLSQISGAWKVIQKL-----------LIKGSDPDIVTYTVLICGYCQIGNV 219
           Y IL  G     +++ A  +++ +            +KG   ++V Y+++I   C+ G V
Sbjct: 145 YGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKG---NVVMYSIVIDCLCRNGFV 201

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           +EG +    M+  G   N   Y  L+  +C  G+  E  GL+ EM   GL   +  +++L
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I GLCK   + +A ++++EM ++   PN     A++ G C K  +  AR  FD++     
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF 321

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
            +DV  YN+ I GY K+G + +AV+++ ++  + + P+IVT+NSLI   CK G+V+ A  
Sbjct: 322 KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE 381

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           ++ T+   GL P  VT    ++  C+   + + + L  ++    + P   +YT++I G C
Sbjct: 382 IVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCC 441

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
              ++ EA+ LL DM++  + P  +TY+ +I   C+   +  A++LLN+M +    P + 
Sbjct: 442 TSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTI 501

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TY+IL+D L     L  A  L   + +  +    + YT +I  +C    + +A+  F +M
Sbjct: 502 TYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREM 561

Query: 580 VEKGFEISIRDYTKSF 595
             K     I  YT  F
Sbjct: 562 HMKNLVPDIVTYTILF 577



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/503 (27%), Positives = 252/503 (50%), Gaps = 8/503 (1%)

Query: 38  LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPS 97
            ++L H    + ++  I       +    + V+ GLC    +  A+ F  E     F  +
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLK--------YGLHPDAFSYNILIHGLCIAGSM 149
            VS   +++  C+ G    A  L  ++ K        + +  +   Y+I+I  LC  G +
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +E  EF N+M  +GV P+  TY  L +G   + +    + ++ +++ +G D  +  +TVL
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G C+ G + E  ++ + M+++G++ N++  + L+   C  G +D A  L   +   G 
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF 321

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           K D+ TY++ I G CK  +V  A+++++EMC + + PN   + +++  LC+   ++ A  
Sbjct: 322 KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE 381

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
              ++  S    D+V   I++DG  K   + +A+ L+ QL+E  ++P + ++  LI+G C
Sbjct: 382 IVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCC 441

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
            + ++ +A  LL  + L  L P  VTY+  ++  C  G I     LL EM  K   P  +
Sbjct: 442 TSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTI 501

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY++++  L K+  L EAV L   M   G+ PD + Y  +I  +CK + + +A  L  +M
Sbjct: 502 TYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREM 561

Query: 510 WLHNLEPTSATYNILIDGLCVNG 532
            + NL P   TY IL + +  +G
Sbjct: 562 HMKNLVPDIVTYTILFNAVFKSG 584



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 228/430 (53%), Gaps = 15/430 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +VY  +++IDGLC+   L +A     E   + + P++V+  A+M  YC  G  ++A+ LF
Sbjct: 254 SVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELF 313

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             + ++G   D ++YN+ IHG C  G + +A+   ++M R GV P+ +TY+ L       
Sbjct: 314 DAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKA 373

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++SGAW++++ +   G  PDIVT  +L+ G C+   +++ + L   ++  G   +V +Y
Sbjct: 374 GEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSY 433

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++L+   C S R+ EA+ LL +M    L P +VTYS LI GLC+  ++  A +L NEM  
Sbjct: 434 TILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHV 493

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   P++  +  +L  L +K+ + EA   F+ +I      DV+ Y IMIDGY K   I E
Sbjct: 494 KGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDE 553

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ L+R++  K + P IVT+  L     K+G  +   + ++ I+     P  + Y   + 
Sbjct: 554 AINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY---LA 610

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           A C+           + ++ K +     +Y   ++    Q  ++  ++++  M+ + + P
Sbjct: 611 ALCKS----------EHLDYKCLASEFASYAGSLQTSVSQ-HIKATMEMMY-MHCLAIHP 658

Query: 482 DQITYNTIIR 491
            +++ N +IR
Sbjct: 659 VRLSNNALIR 668



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 235/488 (48%), Gaps = 24/488 (4%)

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           FHL   +S ++ +  K+L +G   D V    ++ G C  G V + L+  + +++ GF LN
Sbjct: 83  FHL-GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 238 VIAYSVLLSSMCKSGRIDEALGLL--------YEMEAVGLKPDLVTYSILIRGLCKQDKV 289
            ++Y +L++ +C++GR++EA+ LL         E +   +K ++V YSI+I  LC+   V
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +  + YNEM    + PN F +G+++ GLC      E     D +I       V ++ ++
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           IDG  K G + EA +++ +++ +   P+IVT  +L+ G+C  G V  AR L D I   G 
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF 321

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           +    TY  F++ YC+ G ++  + +  EM  + + P  VTY  +I  LCK  ++  A +
Sbjct: 322 KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE 381

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +++ M+  G+TPD +T   ++   CK K L +A  L NQ+    L P   +Y ILI G C
Sbjct: 382 IVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCC 441

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG------ 583
            +  +  A  LL  +   N+    V Y+ +I   C  G +  A     +M  KG      
Sbjct: 442 TSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTI 501

Query: 584 ---------FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
                    ++    D     F  M+  G  PD     +M+  + +   +     L   M
Sbjct: 502 TYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREM 561

Query: 635 IKSGLLPD 642
               L+PD
Sbjct: 562 HMKNLVPD 569



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 196/384 (51%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D  ++ Y+++  +    N +T   +I GLC   +  +    + E   +    SV     +
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +   CK G    A+ +F  M+  G  P+  +   L+ G C+ G+++ A E  + +G  G 
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF 321

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
           + D  TY++   G+  + ++  A +V  ++  +G  P+IVTY  LI   C+ G V    +
Sbjct: 322 KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE 381

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           + + M   G   +++   +LL  +CKS R+D+A+ L  ++   GL PD+ +Y+ILI G C
Sbjct: 382 IVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCC 441

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
              ++ +A+ L  +M  K + P+   +  ++ GLC    I+ A    + + +   + D +
Sbjct: 442 TSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTI 501

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            Y+I++D   K  ++ EAV L+ Q+I++ + P ++ +  +I G+CK+ ++ +A  L   +
Sbjct: 502 TYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREM 561

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGN 428
            +  L P  VTYT   NA  + G+
Sbjct: 562 HMKNLVPDIVTYTILFNAVFKSGS 585



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 149/320 (46%), Gaps = 41/320 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           Y + G V DAV V  +M    +  +I TYNSL   L         W++   +  S    +
Sbjct: 335 YCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPD 394

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T  I++DGLC+  RL  AIL                                   LF 
Sbjct: 395 IVTCCILLDGLCKSKRLDQAIL-----------------------------------LFN 419

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +++ GL PD +SY ILIHG C +  M EA+    DM    + P  +TYS L  G     
Sbjct: 420 QLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSG 479

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +IS AW+++ ++ +KG  PD +TY++L+    +  +++E + L   M+ +G + +V+ Y+
Sbjct: 480 RISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYT 539

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +++   CKS RIDEA+ L  EM    L PD+VTY+IL   + K        +  N +   
Sbjct: 540 IMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDI 599

Query: 303 RISPNSFAHGAILLGLCEKE 322
              P    +   L  LC+ E
Sbjct: 600 NPPPRVLKY---LAALCKSE 616


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 263/553 (47%), Gaps = 26/553 (4%)

Query: 110 KLGFAEVAKGLFCLMLKYGLH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           K    + A+ +  LM + G+   P+AF Y ++ +    AG +  AL     M + GVEP 
Sbjct: 212 KTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSR--AGKLRNALRVLTLMQKAGVEPS 269

Query: 168 ----AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
                 T  +L KG     ++  A K ++++ + G  PDIVTY  LI GYC +  +E+ L
Sbjct: 270 LSICNTTIYVLVKG----GKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDAL 325

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRG 282
           +L   + S+G   + ++Y  ++  +CK  +I+E   L+ +M     L PD VTY+ LI  
Sbjct: 326 ELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHM 385

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           L K      A+    E   K    +   + AI+   C+K  + EA+     +    C  D
Sbjct: 386 LSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPD 445

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           VV Y  ++DG+ +LG I EA ++ +Q+ +    P+ V++ +L+ G C +GK  +AR +++
Sbjct: 446 VVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMIN 505

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
             + H   P+A+TY   M+    EG +     L +EM  K   PT V   ++I+ LC+  
Sbjct: 506 VSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQ 565

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           K+ EA + LE+    G   + + + T+I  FC+  D+  A  +L+ M+L    P + TY 
Sbjct: 566 KVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYT 625

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM--------- 573
            L D L   G L  A  L+V +    +  T V Y ++I  +   G V   +         
Sbjct: 626 ALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR 685

Query: 574 ----TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
               T + Q++EK  +    +  +     +L      D   C V++ ++ + G   S ++
Sbjct: 686 QPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYK 745

Query: 630 LAAVMIKSGLLPD 642
           +A  M +  L PD
Sbjct: 746 VACRMFRRNLTPD 758



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/551 (26%), Positives = 268/551 (48%), Gaps = 12/551 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           YSR G + +A+ V+  M++  ++ S+   N+ +Y L      +      + ++V+    +
Sbjct: 245 YSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPD 304

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T + +I G C  +R++DA+  +     K   P  VS   +M   CK    E  K   C
Sbjct: 305 IVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVK---C 361

Query: 123 LMLKY----GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
           LM K      L PD  +YN LIH L   G  ++AL F  +    G   D + YS +   F
Sbjct: 362 LMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSF 421

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               ++  A  ++  +  +G +PD+VTYT ++ G+C++G ++E  K+ + M   G K N 
Sbjct: 422 CQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNT 481

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           ++Y+ LL+ +C SG+  EA  ++   E     P+ +TY  ++ GL ++ K+ +A  L  E
Sbjct: 482 VSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTRE 541

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  K   P       ++  LC+ + + EA+ Y +  +   C  +VV +  +I G+ ++G+
Sbjct: 542 MVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGD 601

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +  A+ +   +      P  VT+ +L     K G++ +A  L+  +   GL+P+ VTY +
Sbjct: 602 MEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRS 661

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++ Y + G +  +L LL++M  +   P    Y  VI+ LC    L+EA +LL  +    
Sbjct: 662 VIHRYSQWGRVDDMLNLLEKMLKRQ--PFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTA 719

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
              D  T + ++ S+ K      A+++  +M+  NL P       +   L ++G L  AD
Sbjct: 720 SKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEAD 779

Query: 539 CLLVSLQEHNI 549
            L++   E  I
Sbjct: 780 NLMLRFVERGI 790



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 1/250 (0%)

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V+Y  M+D   K      A ++ R +  + I      F  ++  + + GK+ +A R+L  
Sbjct: 201 VVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTL 260

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           ++  G+EPS     T +    + G +++ L  L+ M+   I P  VTY  +IKG C   +
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNR 320

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM-WLHNLEPTSATYN 522
           +++A++L+  +   G  PD+++Y T++   CK K + +   L+ +M W  NL P   TYN
Sbjct: 321 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYN 380

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            LI  L  +G   +A   L   Q+    + KV Y+ I+ + C +G + +A +    M  +
Sbjct: 381 TLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 440

Query: 583 GFEISIRDYT 592
           G    +  YT
Sbjct: 441 GCNPDVVTYT 450



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 119/286 (41%), Gaps = 16/286 (5%)

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
           R S   V + +++    K      ARR+L  +   G+E     +   M +Y   G ++  
Sbjct: 195 RYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNA 254

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L +L  M+   + P+       I  L K  KL++A++ LE M V G+ PD +TYN++I+ 
Sbjct: 255 LRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKG 314

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL-QEHNISL 551
           +C    +  A +L+  +      P   +Y  ++  LC    ++   CL+  +    N+  
Sbjct: 315 YCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIP 374

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFF 596
            +V Y T+I      G    A+ F  +  +KGF I    Y+               KS  
Sbjct: 375 DQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLV 434

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             M S G  PD      ++  F + G +    ++   M K G  P+
Sbjct: 435 IDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPN 480


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 163/622 (26%), Positives = 274/622 (44%), Gaps = 44/622 (7%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           RN  + + +I GLC+  R+ + I   ++    +  P+V +   I+    + G    A  L
Sbjct: 37  RNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINL 96

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M + G  P+  +Y ++I+ +C    +EE     ++M   G+ P   TY+ L  G+  
Sbjct: 97  FSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCK 156

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A +++  +     +P+  TY  LICG+C+  NV   + L   ML      +V+ 
Sbjct: 157 EGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVT 216

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+   CK G +D A  LL  M   G+ PD  TYS+ I  LCK+ ++ +A  L+N + 
Sbjct: 217 YNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLK 276

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K I  N   + A++ G C+   + +A    D ++  +C+ +   YN +IDG  K   + 
Sbjct: 277 EKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQ 336

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+ L   +I+K +  ++ T+  LI    K G    A R+LD +   G +P    YT F+
Sbjct: 337 EALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFI 396

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +A+C  GNI+    ++  M  + + P  +TYT+VI        L  A  +L+ M+  G  
Sbjct: 397 HAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCD 456

Query: 481 PDQITYNTIIRS-----------------------FCKCKDLRK------AFQLLNQMWL 511
           P   TY+ +I+                        F    D+ K      A +L  +M  
Sbjct: 457 PSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLE 516

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
           H   P   TY  LI GLC  G L  A  L   + E  +S ++  Y +++   C  G    
Sbjct: 517 HGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGD 576

Query: 572 AMTFFCQMVEKG---------------FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
           A+     M+E G               +E   ++  K  F  +L  G+  D+   ++++ 
Sbjct: 577 AVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILID 636

Query: 617 AFHQGGDLGSVFELAAVMIKSG 638
              + G      EL  VM   G
Sbjct: 637 GLLKNGLSDGCSELLGVMEARG 658



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 220/414 (53%)

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
           +L + ++ A+ V   +  KG   + V+YT LI G C++G V+EG+ + + M        V
Sbjct: 15  NLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTV 74

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+V++ ++ +SGR  EA+ L  EM   G +P++ TY+++I  +CK+ K+ +  ++ +E
Sbjct: 75  RTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDE 134

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  K + P+   + A++ G C++ M+  A+   D +  ++C  +   YN +I G+ +  N
Sbjct: 135 MVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKN 194

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +  A+ L  +++E R++PS+VT+NSLI+G CK G +  A RLL+ +  +G+ P   TY+ 
Sbjct: 195 VHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSV 254

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
           F++  C++G I+    L   ++ K I    V YT +I G CK  K+ +A  LL+ M    
Sbjct: 255 FIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED 314

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
             P+  TYN +I   CK + +++A  L+  M    L+ T  TY ILI  +   GD   A 
Sbjct: 315 CLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAH 374

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            +L  +           YT  I A C  G++ +A      M E+G       YT
Sbjct: 375 RILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYT 428



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/562 (27%), Positives = 263/562 (46%), Gaps = 18/562 (3%)

Query: 104 IMSRYCKLGF---------AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
           +++ YCKLG             A  +F +M K G   +  SY  LIHGLC  G ++E + 
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
               M      P   TY+++        +   A  +  ++  +G +P+I TYTV+I   C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           +   +EEG ++ + M+ +G   +V  Y+ L+   CK G ++ A  +L  M +    P+  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+ LI G C++  VH+A+ L ++M   R++P+   + +++ G C+   +  A    + +
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
             +  + D   Y++ ID   K G I EA  L+  L EK I  + V + +LI G+CK GK+
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            DA  LLD +      P++ TY   ++  C+E  +Q  L L++ M  K +  T  TYT++
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTIL 360

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I  + K+     A ++L+ M   G  PD   Y   I +FC   ++++A  +++ M+   +
Sbjct: 361 IVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGV 420

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P + TY ++ID     G L  A  +L  + +     +   Y+ +IK    E    K   
Sbjct: 421 MPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKN 480

Query: 575 F-FCQMVEKGFEISIRDYTK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
              C  +   F   + D  K          F  ML +G  P+      ++I   + G LG
Sbjct: 481 VALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLG 540

Query: 626 SVFELAAVMIKSGLLPDKFLIN 647
              +L   M + G+ P + + N
Sbjct: 541 VAQKLFDHMNERGVSPSEAIYN 562



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 153/564 (27%), Positives = 258/564 (45%), Gaps = 33/564 (5%)

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
           VS   ++   C++G  +    +F  M +   +P   +Y +++H L  +G   EA+   ++
Sbjct: 40  VSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSE 99

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M   G EP+  TY+++       +++    +++ +++ KG  P + TY  LI GYC+ G 
Sbjct: 100 MRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGM 159

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           VE   ++ ++M S     N   Y+ L+   C+   +  A+ LL +M    L P +VTY+ 
Sbjct: 160 VEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNS 219

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           LI G CK   +  A +L N M    + P+ + +   +  LC+K  I EA + F+SL    
Sbjct: 220 LIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKG 279

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              + V+Y  +IDGY K G + +A  L  +++ +   P+  T+N+LI G CK  KV +A 
Sbjct: 280 IKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEAL 339

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            L++++   GL+ +  TYT  + A  +EG+      +L +M +    P    YT  I   
Sbjct: 340 LLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAF 399

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           C +  ++EA  ++  M+  GV PD +TY  +I ++     L  AF +L +M+    +P+ 
Sbjct: 400 CTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSH 459

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF--- 575
            TY+ LI  L      K    + +     N+    VA            DV K M F   
Sbjct: 460 HTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVA------------DVWKMMKFETA 507

Query: 576 ---FCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIA 617
              F +M+E G   +I  Y K                 F  M   G  P + I   +L  
Sbjct: 508 LELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNC 567

Query: 618 FHQGGDLGSVFELAAVMIKSGLLP 641
             + G  G    L   M++ G LP
Sbjct: 568 CCELGIYGDAVRLVGAMMEHGHLP 591



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 152/625 (24%), Positives = 269/625 (43%), Gaps = 77/625 (12%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYT 65
           G V + + +  KM+E D   +++TY  +++ L    R  + + +L+ +++      N++T
Sbjct: 53  GRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAI-NLFSEMRERGCEPNIHT 111

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            +++I+ +C++++L++    L E   K   PSV + NA++  YCK G  E A+ +  LM 
Sbjct: 112 YTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMH 171

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
               +P+  +YN LI G C   ++  A+   + M    + P  +TY+ L  G   +  + 
Sbjct: 172 SNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLD 231

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A++++  +   G  PD  TY+V I   C+ G +EE   L   +  +G K N + Y+ L+
Sbjct: 232 SAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALI 291

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              CK+G++D+A  LL  M      P+  TY+ LI GLCK+ KV +A+ L   M  K + 
Sbjct: 292 DGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLK 351

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
                +  +++ + ++     A    D ++ S    DV +Y   I  +   GNI EA  +
Sbjct: 352 CTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDM 411

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADA----RRLLDTIKLHGLEPSAVTYTTFMN 421
              + E+ + P  +T+  +I  +   G +  A    +R+ DT    G +PS  TY+  + 
Sbjct: 412 MSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDT----GCDPSHHTYSCLIK 467

Query: 422 AYCEEG-----------------------------NIQRLLALLQEMETKAIGPTHVTYT 452
              +E                                +  L L ++M      P   TY 
Sbjct: 468 HLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYA 527

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I GLCK  +L  A +L + M   GV+P +  YN+++   C+      A +L+  M  H
Sbjct: 528 KLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEH 587

Query: 513 NLEP-----------------------------------TSATYNILIDGLCVNGDLKNA 537
              P                                       + ILIDGL  NG     
Sbjct: 588 GHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGC 647

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKA 562
             LL  ++     +    Y  +I+ 
Sbjct: 648 SELLGVMEARGCQIHPQTYRMLIEG 672



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/554 (23%), Positives = 241/554 (43%), Gaps = 65/554 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y + GMV  A  ++  M       + +TYN L                            
Sbjct: 154 YCKEGMVEAAQEILDLMHSNSCNPNERTYNEL---------------------------- 185

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
               I G C++  +  A+  L +       PSVV+ N+++   CK+G+ + A  L  LM 
Sbjct: 186 ----ICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMN 241

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G+ PD ++Y++ I  LC  G +EEA    N +   G++ + + Y+ L  G+    ++ 
Sbjct: 242 ENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMD 301

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  ++ ++L +   P+  TY  LI G C+   V+E L L E M+ +G K  V  Y++L+
Sbjct: 302 DANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILI 361

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
            +M K G  D A  +L +M + G +PD+  Y+  I   C +  + +A  + + M  + + 
Sbjct: 362 VAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVM 421

Query: 306 PNSFAHGAIL-----LGLCEKEMITEARMY--------------------------FDSL 334
           P++  +  ++     LGL         RM+                          + ++
Sbjct: 422 PDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNV 481

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
            + + I +V   ++      K+     A++L+ +++E   SP+I T+  LI G CK G++
Sbjct: 482 ALCDSIPNVFFADVA--DVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRL 539

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
             A++L D +   G+ PS   Y + +N  CE G     + L+  M      P   +  V+
Sbjct: 540 GVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVL 599

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
             GL ++   ++A  +  ++   G   D++ +  +I    K        +LL  M     
Sbjct: 600 FCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGC 659

Query: 515 EPTSATYNILIDGL 528
           +    TY +LI+GL
Sbjct: 660 QIHPQTYRMLIEGL 673


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 147/502 (29%), Positives = 247/502 (49%), Gaps = 15/502 (2%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNS 67
           M+ +A     KM++  +    ++ N+LL+ L      D+    + D+  +   R+V+T +
Sbjct: 1   MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I+ID LC++  L+ A     +     F P +V+ N+++  + KLG  +    +F  M   
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
              PD  +YN LI+  C    M +A EF ++M  +G++P+ +TYS     F     +  A
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            K    +      P+  TYT LI   C+ GN+ E LKL E +L  G KLNV+ Y+ LL  
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C+ GR+ EA  +   M   G+ P+  TY+ L+ G  K  ++  A  +  EM  K I P+
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +G IL GLC +  + EA++    +  S    + V+Y  ++D Y K G   EA+ L  
Sbjct: 301 LLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLE 360

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++++            L+ G CKN     A++L D +   G+ P  + YT  ++   + G
Sbjct: 361 EMLD------------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHG 408

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           N+Q  L L   M    +      YT +I GL    ++Q+A  LL++M   GV PD++ Y 
Sbjct: 409 NLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYM 468

Query: 488 TIIRSFCKCKDLRKAFQLLNQM 509
            +I+ +     + +A +L N+M
Sbjct: 469 CLIKKYYALGKVDEALELQNEM 490



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 245/497 (49%), Gaps = 12/497 (2%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P   S NA++ R  K+G  ++++  F  M   G+    F+YNI+I  LC  G +E A   
Sbjct: 19  PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSL 78

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M   G  PD +TY+ L  G   L  +     + +++     DPD++TY  LI  +C+
Sbjct: 79  FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCK 138

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              + +  +    M + G K NV+ YS  + + CK G + EA+    +M  V L P+  T
Sbjct: 139 FERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT 198

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI   CK   + +A++L  E+    I  N   + A+L GLCE+  + EA   F +++
Sbjct: 199 YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAML 258

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            +    +   Y  ++ G++K   +  A  + +++ EK I P ++ + ++++G C   ++ 
Sbjct: 259 NAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLE 318

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A+ L+  IK  G+  +AV YTT M+AY + G     L LL+EM              ++
Sbjct: 319 EAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM------------LDLV 366

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLCK    + A +L ++M   G+ PD+I Y  +I    K  +L++A  L ++M    +E
Sbjct: 367 DGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGME 426

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
                Y  LI GL  +G ++ A  LL  +    +   +V Y  +IK + A G V +A+  
Sbjct: 427 LDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALEL 486

Query: 576 FCQMVEKGFEISIRDYT 592
             +M ++G    + D+ 
Sbjct: 487 QNEMAKRGMITGLSDHA 503



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 257/541 (47%), Gaps = 62/541 (11%)

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           E A   F  M K+ + P   S N L+H L   G  + + +F  DMG  G++    TY+I+
Sbjct: 3   EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIM 62

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
                    +  A  +  ++   G  PDIVTY  LI G+ ++G ++E + + E M     
Sbjct: 63  IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADC 122

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             +VI Y+ L++  CK  R+ +A   L+EM+A GLKP++VTYS  I   CK+  + +AI+
Sbjct: 123 DPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIK 182

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
            + +M    ++PN F                     + SLI +NC               
Sbjct: 183 FFVDMRRVALTPNEFT--------------------YTSLIDANC--------------- 207

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K GN+ EA++L  ++++  I  ++VT+ +L+ G C+ G++ +A  +   +   G+ P+  
Sbjct: 208 KAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQE 267

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TYT  ++ + +   ++    +L+EM+ K I P  + Y  ++ GLC + +L+EA  L+ ++
Sbjct: 268 TYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI 327

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+  + + Y T++ ++ K     +A  LL +M              L+DGLC N   
Sbjct: 328 KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML------------DLVDGLCKNNCF 375

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-- 592
           + A  L   + +  +   K+AYT +I  +   G++ +A+    +M+E G E+ +  YT  
Sbjct: 376 EVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTAL 435

Query: 593 -------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                        ++    M+  G  PD+ +   ++  ++  G +    EL   M K G+
Sbjct: 436 IWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495

Query: 640 L 640
           +
Sbjct: 496 I 496



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 213/440 (48%), Gaps = 15/440 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           + G +  A  +  +MKE      I TYNSL+       ++ +   +++ +K ++   +V 
Sbjct: 68  KEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVI 127

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I+  C+  R+  A  FL E       P+VV+ +  +  +CK G  + A   F  M
Sbjct: 128 TYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM 187

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            +  L P+ F+Y  LI   C AG++ EAL+   ++ + G++ + +TY+ L  G     ++
Sbjct: 188 RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRM 247

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +V + +L  G  P+  TYT L+ G+ +   +E    + + M  +  K +++ Y  +
Sbjct: 248 KEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTI 307

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L  +C   R++EA  L+ E++  G+  + V Y+ L+    K  +  +A+ L  EM     
Sbjct: 308 LWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD--- 364

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
                    ++ GLC+      A+  FD ++    + D + Y  +IDG +K GN+ EA+ 
Sbjct: 365 ---------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALN 415

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L  ++IE  +   +  + +LI+G   +G+V  AR LLD +   G+ P  V Y   +  Y 
Sbjct: 416 LRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYY 475

Query: 425 EEGNIQRLLALLQEMETKAI 444
             G +   L L  EM  + +
Sbjct: 476 ALGKVDEALELQNEMAKRGM 495



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 200/444 (45%), Gaps = 83/444 (18%)

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL  + K GR D +     +M A G+K  + TY+I+I  LCK+  +  A  L+ +M  
Sbjct: 25  NALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKE 84

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
              +P                                   D+V YN +IDG+ KLG + E
Sbjct: 85  AGFTP-----------------------------------DIVTYNSLIDGHGKLGLLDE 109

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            + ++ Q+ +    P ++T+N+LI  FCK  ++  A   L  +K +GL+P+ VTY+TF++
Sbjct: 110 CICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFID 169

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTH--------------------------------- 448
           A+C+EG +Q  +    +M   A+ P                                   
Sbjct: 170 AFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKL 229

Query: 449 --VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             VTYT ++ GLC++ +++EA ++   M   GV P+Q TY  ++  F K K++  A  +L
Sbjct: 230 NVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDIL 289

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +M    ++P    Y  ++ GLC    L+ A  L+  ++E  I+   V YTT++ A+   
Sbjct: 290 KEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKS 349

Query: 567 GDVHKAMTFFCQMVE--------KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAF 618
           G   +A+T   +M++          FE++     K  F  ML  G  PD+     ++   
Sbjct: 350 GQATEALTLLEEMLDLVDGLCKNNCFEVA-----KKLFDEMLDKGMMPDKIAYTALIDGN 404

Query: 619 HQGGDLGSVFELAAVMIKSGLLPD 642
            + G+L     L   MI+ G+  D
Sbjct: 405 MKHGNLQEALNLRDRMIEIGMELD 428



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 147/300 (49%), Gaps = 15/300 (5%)

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA + + ++ + R+ P   + N+L++   K G+   +R+    +   G++ S  TY   +
Sbjct: 4   EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMI 63

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C+EG+++   +L  +M+     P  VTY  +I G  K   L E + + E M      
Sbjct: 64  DYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD 123

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD ITYN +I  FCK + + KAF+ L++M  + L+P   TY+  ID  C  G L+ A   
Sbjct: 124 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKF 183

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
            V ++   ++  +  YT++I A+C  G++ +A+    ++++ G ++++  YT        
Sbjct: 184 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 243

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                  +  F  ML+ G  P+QE    ++  F +  ++    ++   M +  + PD  L
Sbjct: 244 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLL 303



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 143/335 (42%), Gaps = 61/335 (18%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL-YNLRHTDIM--WDLYDDIKVSETPR 61
            + + GM+ +A+     M+ + L  +  TY SL+  N +  ++     L ++I  +    
Sbjct: 170 AFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKL 229

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + ++DGLC++ R+++A    +        P+  +  A++  + K    E AK + 
Sbjct: 230 NVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDIL 289

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF--- 178
             M +  + PD   Y  ++ GLC    +EEA     ++   G+  +A+ Y+ L   +   
Sbjct: 290 KEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKS 349

Query: 179 -----------HLLSQISG---------AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
                       +L  + G         A K+  ++L KG  PD + YT LI G  + GN
Sbjct: 350 GQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 409

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG-------------------------- 252
           ++E L LR+ M+  G +L++ AY+ L+  +  SG                          
Sbjct: 410 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 469

Query: 253 ---------RIDEALGLLYEMEAVGLKPDLVTYSI 278
                    ++DEAL L  EM   G+   L  +++
Sbjct: 470 LIKKYYALGKVDEALELQNEMAKRGMITGLSDHAV 504


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 263/529 (49%), Gaps = 2/529 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V   + VIDG  ++  +  A    +E   +   P +V+ ++++   CK    + A+   
Sbjct: 220 DVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFL 279

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G+ PD ++YN LI+G    G  +EA+    +M R  + PD +  + L       
Sbjct: 280 RQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKY 339

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  V   + +KG +PD+ +YT+++ GY   G + +   L ++ML  G    +  +
Sbjct: 340 GKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTF 399

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+ +    G +D+A+ +  EM   G+KP +VTY  +I  LC+  K+  A++ +N+M  
Sbjct: 400 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMID 459

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIG 360
           + + P+ +A+  ++ G C    + +A+    S IM+N ++ D+V +  +I+   KLG + 
Sbjct: 460 QGVVPDKYAYHCLIQGFCTHGSLLKAKELI-SEIMNNGMRLDIVFFGSIINNLCKLGRVM 518

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  ++   +   + P  V +N L+ G+C  GK+  A R+ D +   G+EP+ V Y T +
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YC+ G I   L+L +EM  K I P+ + Y ++I GL +  +   A     +M   G+ 
Sbjct: 579 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 638

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            ++ TY+ ++R   K +   +A  L  ++   N++    T N +I G+     ++ A  L
Sbjct: 639 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 698

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             S+    +    V Y+ +I     EG V +A   F  M   G E   R
Sbjct: 699 FASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 747



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 259/519 (49%), Gaps = 18/519 (3%)

Query: 82  AILFLQETAGKEFGPSVVSLN----AIMSRYC-KLGFAEVAKGLFCLMLKYGLHPDAFSY 136
           A+      A +  GP V+S      AI+   C +    E+A   F  +L+ GL  DA   
Sbjct: 92  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 151

Query: 137 NILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQ-ISGAWKVIQKL 194
           + L+ G C A   +EAL+   +     G  PD  +Y+IL K   L +Q  SG    + ++
Sbjct: 152 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKS--LCNQGKSGQADDLLRM 209

Query: 195 LIKGS---DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           + +G     PD+V Y  +I G+ + G+V +   L + M+ +G   +++ YS ++ ++CK+
Sbjct: 210 MAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKA 269

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
             +D+A   L +M   G+ PD  TY+ LI G     +  +A++++ EM  + I P+  A 
Sbjct: 270 RAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVAL 329

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++  LC+   I EAR  FD++ M     DV  Y IM++GY   G + +   L+  ++ 
Sbjct: 330 NTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLG 389

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
             I+P I TFN LI  +   G +  A  + + ++ HG++P  VTY T + A C  G +  
Sbjct: 390 DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDD 449

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            +    +M  + + P    Y  +I+G C    L +A +L+ ++   G+  D + + +II 
Sbjct: 450 AMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 509

Query: 492 SFCK---CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           + CK     D +  F L   + LH   P +  YN+L+DG C+ G ++ A  +  ++    
Sbjct: 510 NLCKLGRVMDAQNIFDLTVNVGLH---PDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           I    V Y T++  +C  G + + ++ F +M++KG + S
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 605



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 154/602 (25%), Positives = 274/602 (45%), Gaps = 27/602 (4%)

Query: 53  DIKVSETPR-----NVYTNSIVIDGLCQQSR--LQDAILFLQETAGKEFGPSVVSLNAIM 105
           DI +  TP      +V++ +I++  LC Q +    D +L +    G    P VV+ N ++
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 106 SRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE 165
             + K G    A  LF  M++ G+ PD  +Y+ ++H LC A +M++A  F   M   GV 
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           PD  TY+ L  G+    Q   A +V +++  +   PD+V    L+   C+ G ++E   +
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
            + M  +G   +V +Y+++L+     G + +   L   M   G+ P + T+++LI+    
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 408

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
              + KA+ ++NEM    + P+   +  ++  LC    + +A   F+ +I    + D   
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y+ +I G+   G++ +A +L  +++   +   IV F S+I   CK G+V DA+ + D   
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTV 528

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             GL P AV Y   M+ YC  G +++ L +   M +  I P  V Y  ++ G CK  ++ 
Sbjct: 529 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 588

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           E + L  +M   G+ P  I YN II    +      A    ++M    +     TY+I++
Sbjct: 589 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            GL  N     A  L   L+  N+ +  +   T+I           A  F  + VE+   
Sbjct: 649 RGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMI-----------AGMFQTRRVEEA-- 695

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                  K  F  +  +G  P      +M+    + G +    ++ + M  +G  PD  L
Sbjct: 696 -------KDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRL 748

Query: 646 IN 647
           +N
Sbjct: 749 LN 750



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/585 (23%), Positives = 271/585 (46%), Gaps = 40/585 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPR 61
           + + G V+ A  +  +M +  +   + TY+S+++ L     M      L   +     P 
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N +T + +I G     + ++A+   +E   +   P VV+LN +M   CK G  + A+ +F
Sbjct: 291 N-WTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G +PD FSY I+++G    G + +  +  + M   G+ P   T+++L K +   
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC 409

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A  +  ++   G  P +VTY  +I   C+IG +++ ++    M+ QG   +  AY
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
             L+   C  G + +A  L+ E+   G++ D+V +  +I  LCK  +V  A  +++   +
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             + P++  +  ++ G C    + +A   FD+++ +    +VV Y  +++GY K+G I E
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            + L+R++++K I PS + +N +I G  + G+   A+     +K H              
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK-----VKFH-------------- 630

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
                           EM    I     TY++V++GL K     EA+ L +++  + V  
Sbjct: 631 ----------------EMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKI 674

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D IT NT+I    + + + +A  L   +    L P + TY+I+I  L   G ++ A+ + 
Sbjct: 675 DIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMF 734

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
            S+Q             +++    + ++ +A  +  ++ E+ F +
Sbjct: 735 SSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSL 779



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 229/469 (48%), Gaps = 3/469 (0%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSE 58
           L + YS TG   +AV V  +M+   +   +   N+L+ +L ++  I    D++D + +  
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +V++ +I+++G   +  L D         G    P + + N ++  Y   G  + A 
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM 416

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M  +G+ P   +Y  +I  LC  G M++A+E  N M   GV PD   Y  L +GF
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +  A ++I +++  G   DIV +  +I   C++G V +   + ++ ++ G   + 
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 536

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y++L+   C  G++++AL +   M + G++P++V Y  L+ G CK  ++ + + L+ E
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 596

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  K I P++  +  I+ GL E      A++ F  +  S    +   Y+I++ G  K   
Sbjct: 597 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 656

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             EA+ L+++L    +   I+T N++I G  +  +V +A+ L  +I   GL P AVTY+ 
Sbjct: 657 FDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSI 716

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
            +    +EG ++    +   M+     P       V++ L K+ ++  A
Sbjct: 717 MITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 23/238 (9%)

Query: 433 LALLQEMETKAIGP-----THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           +AL     ++A GP     T  TY +++    +  + + A+     +   G+  D I  +
Sbjct: 93  VALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIAS 152

Query: 488 TIIRSFCKCKDLRKAFQ-LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
            +++ FC+ K   +A   LL++       P   +YNIL+  LC  G    AD LL  + E
Sbjct: 153 HLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAE 212

Query: 547 HNI--SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------------ 592
                S   VAY T+I     EGDV+KA   F +MV++G    +  Y+            
Sbjct: 213 GGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAM 272

Query: 593 ---KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              ++F   M++ G  PD      ++  +   G       +   M +  +LPD   +N
Sbjct: 273 DKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALN 330


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 236/454 (51%), Gaps = 3/454 (0%)

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           C+L   + A   F LM + G +P   + N ++  L     +E A  F  DM R  ++ + 
Sbjct: 166 CQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNV 225

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
            T++I+        ++  A   +  + + G  P IVTY  L+ G+   G +E    +   
Sbjct: 226 YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISE 285

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M S+GF+ ++  Y+ +LS MC  GR  E   +L EM+ +GL PD V+Y+ILIRG      
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGD 342

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           +  A    +EM  + + P  + +  ++ GL  +  I  A +    +     + D V YNI
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I+GY + G+  +A  L+ +++   I P+  T+ SLIY  C+  K  +A  L + +   G
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           ++P  V   T M+ +C  GN+ R  +LL+EM+  +I P  VTY  +++GLC + K +EA 
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +L+ +M   G+ PD I+YNT+I  + K  D + AF + ++M      PT  TYN L+ GL
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
             N + + A+ LL  ++   I     ++ ++I+A
Sbjct: 583 SKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 220/420 (52%), Gaps = 3/420 (0%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           L + +R+++A +F  +    E   +V + N +++  CK G  + AKG   +M  +G+ P 
Sbjct: 200 LSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPT 259

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
             +YN L+ G  + G +E A    ++M   G +PD  TY+ +      +     A +V++
Sbjct: 260 IVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPI---LSWMCNEGRASEVLR 316

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           ++   G  PD V+Y +LI G    G++E     R+ M+ QG       Y+ L+  +    
Sbjct: 317 EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 376

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           +I+ A  L+ E+   G+  D VTY+ILI G C+     KA  L++EM +  I P  F + 
Sbjct: 377 KIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYT 436

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           +++  LC K    EA   F+ ++      D+V+ N ++DG+  +GN+  A  L +++   
Sbjct: 437 SLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMM 496

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            I+P  VT+N L+ G C  GK  +AR L+  +K  G++P  ++Y T ++ Y ++G+ +  
Sbjct: 497 SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 556

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             +  EM +    PT +TY  ++KGL K  + + A +LL +M   G+ P+  ++ ++I +
Sbjct: 557 FMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 216/446 (48%), Gaps = 23/446 (5%)

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           KG  P   T   ++    ++  +E        M     K NV  ++++++ +CK G++ +
Sbjct: 184 KGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKK 243

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A G L  ME  G+KP +VTY+ L++G   + ++  A  + +EM SK   P+   +  IL 
Sbjct: 244 AKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILS 303

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
            +C +   +E       +     + D V YNI+I G    G++  A     +++++ + P
Sbjct: 304 WMCNEGRASEVLREMKEI---GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVP 360

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           +  T+N+LI+G     K+  A  L+  I+  G+   +VTY   +N YC+ G+ ++  AL 
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALH 420

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
            EM T  I PT  TYT +I  LC++ K +EA +L E +   G+ PD +  NT++   C  
Sbjct: 421 DEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAI 480

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
            ++ +AF LL +M + ++ P   TYN L+ GLC  G  + A  L+  ++   I    ++Y
Sbjct: 481 GNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 540

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
            T+I  +  +GD   A     +M+  GF  ++  Y        L  G   +QE       
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA------LLKGLSKNQE------- 587

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPD 642
                G+L    EL   M   G++P+
Sbjct: 588 -----GELAE--ELLREMKSEGIVPN 606



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 212/451 (47%), Gaps = 43/451 (9%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           MV +A+     MKE       +T N   +LL  L   +  W  Y D+   E   NVYT +
Sbjct: 170 MVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFN 229

Query: 68  IVIDGLCQQSRLQDAILFL-----------------------------------QETAGK 92
           I+I+ LC++ +L+ A  FL                                    E   K
Sbjct: 230 IMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSK 289

Query: 93  EFGPSVVSLNAIMSRYCKLGFA-EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
            F P + + N I+S  C  G A EV +     M + GL PD+ SYNILI G    G +E 
Sbjct: 290 GFQPDMQTYNPILSWMCNEGRASEVLRE----MKEIGLVPDSVSYNILIRGCSNNGDLEM 345

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A  + ++M + G+ P   TY+ L  G  + ++I  A  +I+++  KG   D VTY +LI 
Sbjct: 346 AFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILIN 405

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           GYCQ G+ ++   L + M++ G +     Y+ L+  +C+  +  EA  L  ++   G+KP
Sbjct: 406 GYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKP 465

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           DLV  + L+ G C    + +A  L  EM    I+P+   +  ++ GLC +    EAR   
Sbjct: 466 DLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELM 525

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             +       D + YN +I GY K G+   A  +  +++    +P+++T+N+L+ G  KN
Sbjct: 526 GEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKN 585

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +   A  LL  +K  G+ P+  ++ + + A
Sbjct: 586 QEGELAEELLREMKSEGIVPNDSSFCSVIEA 616



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/438 (23%), Positives = 193/438 (44%), Gaps = 23/438 (5%)

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           + + +L+   CQ+  V+E ++   +M  +GF       + +L+ + +  RI+ A     +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M  + +K ++ T++I+I  LCK+ K+ KA      M    I P    +  ++ G   +  
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           I  AR+    +       D+  YN ++     + N G A ++ R++ E  + P  V++N 
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSW---MCNEGRASEVLREMKEIGLVPDSVSYNI 332

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI G   NG +  A    D +   G+ P+  TY T ++    E  I+    L++E+  K 
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           I    VTY ++I G C+    ++A  L ++M   G+ P Q TY ++I   C+    R+A 
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           +L  ++    ++P     N L+DG C  G++  A  LL  +   +I+   V Y  +++  
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGL 512

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           C EG   +A     +M  +G                      PD      ++  + + GD
Sbjct: 513 CGEGKFEEARELMGEMKRRGI--------------------KPDHISYNTLISGYSKKGD 552

Query: 624 LGSVFELAAVMIKSGLLP 641
               F +   M+  G  P
Sbjct: 553 TKHAFMVRDEMLSLGFNP 570



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 18/308 (5%)

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           +L  I  A   Y  +    I  ++ TFN +I   CK GK+  A+  L  +++ G++P+ V
Sbjct: 202 RLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIV 261

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TY T +  +   G I+    ++ EM++K   P   TY  ++  +C + +   A ++L +M
Sbjct: 262 TYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREM 318

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
             IG+ PD ++YN +IR      DL  AF   ++M    + PT  TYN LI GL +   +
Sbjct: 319 KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI 378

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK- 593
           + A+ L+  ++E  I L  V Y  +I  +C  GD  KA     +M+  G + +   YT  
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSL 438

Query: 594 --------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                           F  ++  G  PD  +   ++      G++   F L   M    +
Sbjct: 439 IYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSI 498

Query: 640 LPDKFLIN 647
            PD    N
Sbjct: 499 NPDDVTYN 506



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 3/258 (1%)

Query: 33  TYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN+L++ L      +    L  +I+      +  T +I+I+G CQ    + A     E 
Sbjct: 364 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM 423

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                 P+  +  +++   C+      A  LF  ++  G+ PD    N L+ G C  G+M
Sbjct: 424 MTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNM 483

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           + A     +M    + PD +TY+ L +G     +   A +++ ++  +G  PD ++Y  L
Sbjct: 484 DRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTL 543

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I GY + G+ +    +R+ MLS GF   ++ Y+ LL  + K+   + A  LL EM++ G+
Sbjct: 544 ISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGI 603

Query: 270 KPDLVTYSILIRGLCKQD 287
            P+  ++  +I  +   D
Sbjct: 604 VPNDSSFCSVIEAMSNLD 621



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 23/209 (11%)

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M+ K   P   T   ++  L +  +++ A     DMY + +  +  T+N +I   CK   
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L+KA   L  M +  ++PT  TYN L+ G  + G ++ A  ++  ++          Y  
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAF 618
           I+   C EG   +A     +M E                     G  PD     +++   
Sbjct: 301 ILSWMCNEG---RASEVLREMKEI--------------------GLVPDSVSYNILIRGC 337

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              GDL   F     M+K G++P  +  N
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYN 366


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/499 (29%), Positives = 250/499 (50%), Gaps = 25/499 (5%)

Query: 34  YNSLLYNLRHTDI---MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQD---AILFLQ 87
           Y+   +N  H D+   +   Y  ++++ +P  +  N I+  G   +S   +   AI    
Sbjct: 15  YSHSKFNSNHVDVHDAISSFYRMLRMNPSPSIIEFNKIL--GSLVKSNNNNYPIAISLYH 72

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
                   PS+V+ N +++ YC LG  + A  +   +LK G HPD  +   LI GLC+ G
Sbjct: 73  RLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNG 132

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            + EAL F + +   G   + ++Y IL  G   + +   A +V++K+  K  + ++V Y+
Sbjct: 133 KVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYS 192

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            +I   C+   V E  +L   M+ +    +V+ +S L+   C  G+  EA GL +EM   
Sbjct: 193 TIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLT 252

Query: 268 GLKPDLVTYSILIRGLCKQ-----------------DKVHKAIQLYNEMCSKRISPNSFA 310
            + PD+ T++IL+  LCK+                 ++V+KA  ++N +  +R++P+  +
Sbjct: 253 NINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHS 312

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  I+  LC+ +M+ EA   F+ +       D V Y+ +IDG  K   I  A +L  Q+ 
Sbjct: 313 YTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMH 372

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            +     ++T+ S ++  CKN +V  A  L+  IK  G++P+  TY   ++  C+EG  +
Sbjct: 373 ARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFE 432

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               + Q++  K    T  TY ++I GLC +    EA+ LLE M   G TPD +TY TII
Sbjct: 433 NAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETII 492

Query: 491 RSFCKCKDLRKAFQLLNQM 509
           R+  K  +  KA +LL +M
Sbjct: 493 RALFKNDENHKAEKLLREM 511



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 242/483 (50%), Gaps = 19/483 (3%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEE--ALEFTNDMGRHGVEPDAITYSILAKGF 178
           F  ML+    P    +N ++  L  + +     A+   + +  + + P  +T++ +   +
Sbjct: 34  FYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCY 93

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             L ++  A+ V+ K+L  G  PD +T T LI G C  G V E L   + ++++GF+LN 
Sbjct: 94  CHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNE 153

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           ++Y +L++ +CK G    AL +L +++   +  ++V YS +I  LCK+  V +A +LY++
Sbjct: 154 VSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQ 213

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  K++SP+     A++ G C      EA   F  ++++N   DV  +NI++D   K G+
Sbjct: 214 MIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGS 273

Query: 359 -----------------IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
                            + +A  ++  + ++R++P + ++  +I   CK   V +A  L 
Sbjct: 274 TKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLF 333

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           + ++  G+ P  VTY++ ++  C+   I     LL +M  +      +TYT  +  LCK 
Sbjct: 334 NEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKN 393

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++ +AV L++ +   G+ P+  TYN +I   CK      A  +   + +   + T  TY
Sbjct: 394 HQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTY 453

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           NI+I+GLC+ G    A  LL  ++++  +   V Y TII+A     + HKA     +M+ 
Sbjct: 454 NIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIA 513

Query: 582 KGF 584
           +G 
Sbjct: 514 RGL 516



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 216/442 (48%), Gaps = 32/442 (7%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +++ ++ +++  C  G +D A  +L ++  +G  PD +T + LI+GLC   KVH+A+  +
Sbjct: 82  SIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFH 141

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           + + ++    N  ++G ++ GLC+      A      +       +VV+Y+ +ID   K 
Sbjct: 142 DHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKE 201

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             + EA +LY Q+I K++SP +VTF++LIYGFC  G+  +A  L   + L  + P   T+
Sbjct: 202 KLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTF 261

Query: 417 TTFMNAYCEEGNIQR----LLALLQEME--TKA------IGPTHVT-----YTVVIKGLC 459
              ++A C+EG+ +     L  +++E+    KA      IG   VT     YT++IK LC
Sbjct: 262 NILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLC 321

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K   + EA+ L  +M   G+TPD++TY+++I   CK + +  A++LL+QM          
Sbjct: 322 KIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVI 381

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TY   +  LC N  +  A  L+  +++  I      Y  +I   C EG    A   F  +
Sbjct: 382 TYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDL 441

Query: 580 VEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
           + KG+++++  Y                 +    M  NG  PD    E ++ A  +  + 
Sbjct: 442 LIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDEN 501

Query: 625 GSVFELAAVMIKSGLLPDKFLI 646
               +L   MI  GLL +K  I
Sbjct: 502 HKAEKLLREMIARGLLEEKVEI 523



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 141/307 (45%), Gaps = 52/307 (16%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           ++LY  + V +   +V T S +I G C   + ++A     E       P V + N ++  
Sbjct: 208 YELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDA 267

Query: 108 YCKLGFAEVAKGLFCLMLK-----------------YGLHPDAFSYNILIHGLCIAGSME 150
            CK G  +  K +  +M+K                   + PD  SY I+I  LC    ++
Sbjct: 268 LCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVD 327

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT--- 207
           EAL   N+M   G+ PD +TYS L  G     +IS AW+++ ++  +G   D++TYT   
Sbjct: 328 EALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFL 387

Query: 208 --------------------------------VLICGYCQIGNVEEGLKLREVMLSQGFK 235
                                           +LI G C+ G  E    + + +L +G+K
Sbjct: 388 HALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYK 447

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           + V  Y+++++ +C  G  DEA+ LL +ME  G  PD+VTY  +IR L K D+ HKA +L
Sbjct: 448 VTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKL 507

Query: 296 YNEMCSK 302
             EM ++
Sbjct: 508 LREMIAR 514



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 160/357 (44%), Gaps = 7/357 (1%)

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE--ARMYFDSLIMSNCIQDVVLY 346
           VH AI  +  M     SP+      IL  L +        A   +  L ++     +V +
Sbjct: 27  VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTF 86

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N +I+ Y  LG +  A  +  ++++    P  +T  +LI G C NGKV +A    D +  
Sbjct: 87  NTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIA 146

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G   + V+Y   +N  C+ G  +  L +L++++ K +    V Y+ +I  LCK+  + E
Sbjct: 147 RGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTE 206

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A +L   M V  V+PD +T++ +I  FC     ++AF L ++M L N+ P   T+NIL+D
Sbjct: 207 AYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVD 266

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYT-TIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            LC  G  K    +L  + +    + K  +   II       DVH     +  ++++  +
Sbjct: 267 ALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHS----YTIIIKRLCK 322

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           I + D   S F  M   G  PD+     ++    +   +   +EL   M   G   D
Sbjct: 323 IKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPAD 379


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 155/578 (26%), Positives = 281/578 (48%), Gaps = 5/578 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDIKVSETPRNVYTN 66
           G +     V+ KM++    ++  +YN L++ L  +       ++Y  +       ++ T 
Sbjct: 171 GGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTY 230

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S ++  L ++   +  ++ L+E       P+V +    +    + G  + A  +F  M  
Sbjct: 231 SALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDD 290

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD  +Y +LI  LC AG +E A E    M  +G +PD + Y  L   F+    +  
Sbjct: 291 EGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT 350

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
             +   ++   G  PD+VT+T+L+   C+  + +E     +VM  QG   N+  Y+ L+ 
Sbjct: 351 FKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLIC 410

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            + ++GRI++AL LL  ME+VG++P   TY+I I    K  +  KA++ + +M +K I P
Sbjct: 411 GLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVP 470

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N  A  A L  L E   + EA+  F+ L  +    D V YN+M+  Y K+G + EAV L 
Sbjct: 471 NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLL 530

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++I     P ++  NSLI    K G+V +A ++ D +K   L P+ VTY T ++   +E
Sbjct: 531 SEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKE 590

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +Q+ + L + M  K   P  +++  ++   CK  +++ A+++   M V+   PD +TY
Sbjct: 591 GRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTY 650

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS-LQ 545
           NT+I    K   +  AF   +Q+   ++ P   T   L+ GL   G + +A  +    + 
Sbjct: 651 NTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMY 709

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +    + +  +  ++     E ++ KA+ F  ++V  G
Sbjct: 710 QVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNG 747



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 257/553 (46%), Gaps = 3/553 (0%)

Query: 30  SIQTYNSLLYNLRHTDIMWDL---YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           + +T N +L  LR  D + D+   ++ ++     R++ T   +   L  +  L+     L
Sbjct: 121 TTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVL 180

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            +     F  +  S N ++    + GF   A  ++  M+  GL P   +Y+ L+  L   
Sbjct: 181 NKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK 240

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
              E  +    +M   G+ P+  T++I  +      +I  A+++ +++  +G  PD+VTY
Sbjct: 241 RDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTY 300

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           TVLI   C  G +E   +L   M + G K + + Y  LL      G +D       +MEA
Sbjct: 301 TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEA 360

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G  PD+VT++IL+  LCK     +A   ++ M  + I PN   +  ++ GL     I +
Sbjct: 361 DGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIED 420

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A     ++           YNI ID + K G  G+AV+ + ++  K I P+IV  N+ +Y
Sbjct: 421 ALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLY 480

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
              + G++ +A+ + + ++ +GL P +VTY   M  Y + G +   + LL EM      P
Sbjct: 481 SLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             +    +I  L K  ++ EA Q+ + M  + ++P  +TYNT++    K   ++KA +L 
Sbjct: 541 DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
             M      P + ++N L+D  C N +++ A  +   +   +     + Y T+I     E
Sbjct: 601 ESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 567 GDVHKAMTFFCQM 579
             V+ A  FF Q+
Sbjct: 661 NKVNHAFWFFHQL 673



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 183/789 (23%), Positives = 314/789 (39%), Gaps = 159/789 (20%)

Query: 18   VIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
            ++ +M++L L+ ++ T+     +L      D  ++++  +       ++ T +++ID LC
Sbjct: 249  LLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALC 308

Query: 75   QQSRLQDAI-LFLQETAG-------------------------KEFG---------PSVV 99
               +L++A  LF++  A                          KEF          P VV
Sbjct: 309  NAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVV 368

Query: 100  SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
            +   ++   CK    + A   F +M K G+ P+  +YN LI GL  AG +E+AL+    M
Sbjct: 369  TFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTM 428

Query: 160  GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-------------------- 199
               GV+P A TY+I    F    +   A +  +K+  KG                     
Sbjct: 429  ESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRL 488

Query: 200  ---------------DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
                            PD VTY +++  Y ++G V+E + L   M+  G + +VI  + L
Sbjct: 489  REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSL 548

Query: 245  LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
            + S+ K+GR+DEA  +   M+ + L P +VTY+ L+ GL K+ +V KAI+L+  M  K+ 
Sbjct: 549  IDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKC 608

Query: 305  SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI-------------- 350
            SPN+ +   +L   C+ + +  A   F  + + +C  DV+ YN +I              
Sbjct: 609  SPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFW 668

Query: 351  --------------------DGYVKLGNIGEAVQLYRQ---------------------L 369
                                 G VK G IG+A+ + R                      L
Sbjct: 669  FFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTL 728

Query: 370  IEKRISPSIVTFNSLIYG---------------FCKNGKVADARRLLDTI-KLHGLEPSA 413
            +E  +  +I+    L+                  CK+ +   A ++ D   K  G+ P+ 
Sbjct: 729  VEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTL 788

Query: 414  VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
             +Y   +    E    ++   L ++M+     P   T+ +++    K  K+ E  +L ++
Sbjct: 789  ASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKE 848

Query: 474  MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
            M      PD ITYN +I S  K  +L KA      +   +  PT  TY  LIDGL   G 
Sbjct: 849  MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908

Query: 534  LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
            L+ A  L   + ++        +  +I  +   GD   A   F +MV +G    ++ YT 
Sbjct: 909  LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968

Query: 594  SFFCMML---------------SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
               C+ L               S G  PD      ++    +   +     L   M   G
Sbjct: 969  LVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028

Query: 639  LLPDKFLIN 647
            ++PD +  N
Sbjct: 1029 IVPDLYTYN 1037



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 157/692 (22%), Positives = 293/692 (42%), Gaps = 85/692 (12%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
            R G + DA+ ++  M+ + ++ +  TYN                                
Sbjct: 414  RAGRIEDALKLLGTMESVGVQPTAYTYN-------------------------------- 441

Query: 68   IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
            I ID   +      A+   ++   K   P++V+ NA +    ++G    AK +F  + + 
Sbjct: 442  IFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501

Query: 128  GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            GL PD+ +YN+++      G ++EA+   ++M R+G EPD I  + L    +   ++  A
Sbjct: 502  GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561

Query: 188  WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            W++  ++      P +VTY  L+ G  + G V++ ++L E M+ +    N I+++ LL  
Sbjct: 562  WQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDC 621

Query: 248  MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
             CK+  ++ AL +  +M  +  KPD++TY+ +I GL K++KV+ A   ++++  K + P+
Sbjct: 622  FCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPD 680

Query: 308  SFAHGAILLGLCEKEMITEA----------------RMYFDSLIMSNCIQDVVLYNIMID 351
                  +L GL +   I +A                R +++ L+    ++  +   I+  
Sbjct: 681  HVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFA 740

Query: 352  GYVKLGNIGE--------------------AVQLYRQLIEK-RISPSIVTFNSLIYGFCK 390
              + L  I                      A Q++ +  +K  ISP++ ++N LI    +
Sbjct: 741  EELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLE 800

Query: 391  NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
                  A  L   +K  G  P A T+   +  + + G I  L  L +EM ++   P  +T
Sbjct: 801  VHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAIT 860

Query: 451  YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
            Y +VI  L K   L +A+    D+      P   TY  +I    K   L +A +L  +M 
Sbjct: 861  YNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS 920

Query: 511  LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
             +  +P  A +NILI+G    GD + A  L   +    I     +YT ++   C  G V 
Sbjct: 921  DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVD 980

Query: 571  KAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVML 615
            +A+ +F ++   G +     Y +               + +  M + G  PD      ++
Sbjct: 981  EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040

Query: 616  IAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            +     G +     +   +  +GL PD F  N
Sbjct: 1041 LNLGLAGMVEQAKRMYEELQLAGLEPDVFTYN 1072



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 148/604 (24%), Positives = 271/604 (44%), Gaps = 18/604 (2%)

Query: 1    MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVS 57
            M+   YS+ G V +AV ++++M     +  +   NSL   LY     D  W ++D +K  
Sbjct: 512  MMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDM 571

Query: 58   ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            +    V T + ++ GL ++ R+Q AI   +    K+  P+ +S N ++  +CK    E+A
Sbjct: 572  KLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELA 631

Query: 118  KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              +F  M      PD  +YN +I+GL     +  A  F + + +  + PD +T   L  G
Sbjct: 632  LKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPG 690

Query: 178  FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI--GNVEEGLKLREVMLSQGFK 235
                 QI  A  + +  + +      V + V    +  +  G + E    + ++ ++   
Sbjct: 691  LVKCGQIGDAISIARDFMYQ------VRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELV 744

Query: 236  LNVIAYS-----VLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKV 289
            LN I         L+  +CK  R   A  +  +  + +G+ P L +Y+ LI  L +    
Sbjct: 745  LNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYT 804

Query: 290  HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             KA  L+ +M +   +P++F    +L    +   ITE    +  +I   C  D + YNI+
Sbjct: 805  EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIV 864

Query: 350  IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
            I    K  N+ +A+  +  L+     P+  T+  LI G  K G++ +A RL + +  +G 
Sbjct: 865  ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924

Query: 410  EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            +P+   +   +N Y + G+ +    L + M  + I P   +YT+++  LC   ++ EA+ 
Sbjct: 925  KPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALY 984

Query: 470  LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
               ++   G+ PD I YN II    K + + +A  L N+M    + P   TYN L+  L 
Sbjct: 985  YFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLG 1044

Query: 530  VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            + G ++ A  +   LQ   +      Y  +I+ +    +   A T +  M+  G   +I 
Sbjct: 1045 LAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIG 1104

Query: 590  DYTK 593
             Y +
Sbjct: 1105 TYAQ 1108



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 239/505 (47%), Gaps = 43/505 (8%)

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           E    +F  M K  +  D  +Y  +   L I G + +     N M + G   +A +Y+ L
Sbjct: 139 EDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGL 198

Query: 175 AKGFHLLSQISG----AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
               HLL Q SG    A +V ++++ +G  P + TY+ L+    +  + E  + L + M 
Sbjct: 199 ---IHLLIQ-SGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEME 254

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
             G + NV  +++ +  + ++G+IDEA  +   M+  G  PDLVTY++LI  LC   ++ 
Sbjct: 255 DLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLE 314

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A +L+ +M +    P+   +  +L    +   +   + ++  +     + DVV + I++
Sbjct: 315 NAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILV 374

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           D   K  +  EA   +  + ++ I P++ T+N+LI G  + G++ DA +LL T++  G++
Sbjct: 375 DVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQ 434

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI-------------------------- 444
           P+A TY  F++ + + G   + +   ++M+ K I                          
Sbjct: 435 PTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTM 494

Query: 445 ---------GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
                     P  VTY +++K   K  ++ EAV LL +M   G  PD I  N++I S  K
Sbjct: 495 FNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYK 554

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              + +A+Q+ ++M    L PT  TYN L+ GL   G ++ A  L  S+ E   S   ++
Sbjct: 555 AGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTIS 614

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMV 580
           + T++   C   +V  A+  F +M 
Sbjct: 615 FNTLLDCFCKNDEVELALKMFSKMT 639



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 223/481 (46%), Gaps = 35/481 (7%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N ++  L +   +E+       M +  +  D  TY  + K   +   +     V+ K+  
Sbjct: 126 NFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRK 185

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
            G   +  +Y  LI    Q G   E L++   M+S+G K ++  YS L+ ++ K    + 
Sbjct: 186 AGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEM 245

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
            + LL EME +GL+P++ T++I IR L +  K+ +A +++  M  +   P+   +  ++ 
Sbjct: 246 VMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLID 305

Query: 317 GLCEKEMITEARMYF----------DSLI-------------------------MSNCIQ 341
            LC    +  A+  F          D +I                             + 
Sbjct: 306 ALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMP 365

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           DVV + I++D   K  +  EA   +  + ++ I P++ T+N+LI G  + G++ DA +LL
Sbjct: 366 DVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLL 425

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
            T++  G++P+A TY  F++ + + G   + +   ++M+ K I P  V     +  L + 
Sbjct: 426 GTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEM 485

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            +L+EA  +   +   G+ PD +TYN +++ + K   + +A  LL++M  +  EP     
Sbjct: 486 GRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVV 545

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N LID L   G +  A  +   +++  +S T V Y T++     EG V KA+  F  M+E
Sbjct: 546 NSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIE 605

Query: 582 K 582
           K
Sbjct: 606 K 606



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 187/365 (51%), Gaps = 38/365 (10%)

Query: 23   KELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRL 79
            K+L +  ++ +YN L   L  + +T+  WDL+ D+K      + +T ++++    +  ++
Sbjct: 780  KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKI 839

Query: 80   QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
             +     +E               ++SR CK                    PDA +YNI+
Sbjct: 840  TELFELYKE---------------MISRRCK--------------------PDAITYNIV 864

Query: 140  IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
            I  L  + ++++AL+F  D+      P   TY  L  G   + ++  A ++ +++   G 
Sbjct: 865  ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924

Query: 200  DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
             P+   + +LI GY +IG+ E   +L + M+++G + ++ +Y++L+  +C +GR+DEAL 
Sbjct: 925  KPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALY 984

Query: 260  LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
               E+++ GL PD + Y+ +I GL K  ++ +A+ LYNEM ++ I P+ + + +++L L 
Sbjct: 985  YFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLG 1044

Query: 320  EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
               M+ +A+  ++ L ++    DV  YN +I GY    N   A  +Y+ ++    +P+I 
Sbjct: 1045 LAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIG 1104

Query: 380  TFNSL 384
            T+  L
Sbjct: 1105 TYAQL 1109



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/423 (23%), Positives = 173/423 (40%), Gaps = 50/423 (11%)

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           T + ++  L   DKV     ++  M  K I  +   +  I   L  +  + +     + +
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
             +  + +   YN +I   ++ G  GEA+++YR+++ + + PS+ T+++L+    K    
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
                LL  ++  GL P+  T+T  +      G I     + + M+ +  GP  VTYTV+
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF--------------------- 493
           I  LC   +L+ A +L   M   G  PDQ+ Y T++  F                     
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 494 --------------CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
                         CK +D  +AF   + M    + P   TYN LI GL   G +++A  
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF--------------- 584
           LL +++   +  T   Y   I      G+  KA+  F +M  KG                
Sbjct: 424 LLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLA 483

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           E+      K+ F  +  NG  PD     +M+  + + G +     L + MI++G  PD  
Sbjct: 484 EMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVI 543

Query: 645 LIN 647
           ++N
Sbjct: 544 VVN 546



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 140/285 (49%), Gaps = 9/285 (3%)

Query: 1    MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVS 57
            ML  V+ ++G + +   +  +M     K    TYN ++ +L  +   D   D + D+  S
Sbjct: 828  MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS 887

Query: 58   E---TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
            +   TPR   T   +IDGL +  RL++A+   +E +     P+    N +++ Y K+G  
Sbjct: 888  DFRPTPR---TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDT 944

Query: 115  EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
            E A  LF  M+  G+ PD  SY IL+  LC+AG ++EAL + N++   G++PD I Y+ +
Sbjct: 945  ETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRI 1004

Query: 175  AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
              G     ++  A  +  ++  +G  PD+ TY  L+      G VE+  ++ E +   G 
Sbjct: 1005 INGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGL 1064

Query: 235  KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            + +V  Y+ L+     S   + A  +   M   G  P++ TY+ L
Sbjct: 1065 EPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 222/417 (53%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +L DAI   +E       PS+V  N ++S   K+   +V   L   M   G+  D +++N
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           I+I+  C    +  AL     M + G EPD +T   L  GF   +++S A  ++ K++  
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  PDIV Y  +I   C+   V + L   + +  +G + NV+ Y+ L++ +C SGR ++A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             LL +M    + P+++TYS L+    K  KV +A +++ EM    I P+   + +++ G
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC  + I EA   FD ++   C  DVV YN +I+G+ K   + + ++L+R++ ++ +  +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNN 364

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            VT+N+LI GF + G V  A+     +   G+ P   TY   +   C+ G +++ L + +
Sbjct: 365 TVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFE 424

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +M+   +    VTYT VI+G+CK  K+++A  L   + + G+ PD +TY T++   C
Sbjct: 425 DMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLC 481



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 226/433 (52%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  M+K    P    +N L+  +      +  +     M   G+  D  T++I+  
Sbjct: 69  AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F    Q+S A  V+ K+L  G +PD VT   L+ G+C+   V + + L + M+  G++ 
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +++AY+ ++ S+CK+ R+++AL    E+   G++P++VTY+ L+ GLC   + + A +L 
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M  ++I+PN   + A+L    +   + EA+  F+ ++  +   D+V Y+ +I+G    
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             I EA Q++  ++ K   P +V++N+LI GFCK  +V D  +L   +   GL  + VTY
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTY 368

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T +  + + G++ +      +M++  + P   TY +++ GLC    L++A+ + EDM  
Sbjct: 369 NTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQK 428

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             +  D +TY T+I+  CK   +  A+ L   + L  L+P   TY  ++ GLC  G    
Sbjct: 429 SEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHE 488

Query: 537 ADCLLVSLQEHNI 549
            + L   +++  +
Sbjct: 489 VEALYTKMKQEGL 501



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 209/392 (53%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P IV +  L+    ++   +  + L + M   G + ++  ++++++  C   ++  AL +
Sbjct: 83  PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSV 142

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L +M  +G +PD VT   L+ G C++++V  A+ L ++M      P+  A+ AI+  LC+
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCK 202

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              + +A  +F  +       +VV Y  +++G    G   +A +L R +I+++I+P+++T
Sbjct: 203 TRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVIT 262

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +++L+  F KNGKV +A+ + + +    ++P  VTY++ +N  C    I     +   M 
Sbjct: 263 YSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
           +K   P  V+Y  +I G CK  ++++ ++L   M   G+  + +TYNT+I+ F +  D+ 
Sbjct: 323 SKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVD 382

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           KA +  +QM    + P   TYNIL+ GLC NG L+ A  +   +Q+  + L  V YTT+I
Sbjct: 383 KAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVI 442

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +  C  G V  A   FC +  KG +  I  YT
Sbjct: 443 QGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYT 474



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 216/436 (49%)

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           + +A+    +M +    P  + ++ L      + +      + +K+ + G   D+ T+ +
Sbjct: 66  LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           +I  +C    V   L +   ML  G++ + +    L++  C+  R+ +A+ L+ +M  +G
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
            +PD+V Y+ +I  LCK  +V+ A+  + E+  K I PN   + A++ GLC      +A 
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA 245

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
                +I      +V+ Y+ ++D +VK G + EA +++ +++   I P IVT++SLI G 
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C + ++ +A ++ D +   G  P  V+Y T +N +C+   ++  + L ++M  + +    
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNT 365

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VTY  +I+G  +   + +A +    M   GV+PD  TYN ++   C    L KA  +   
Sbjct: 366 VTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFED 425

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    ++    TY  +I G+C  G +++A  L  SL    +    V YTT++   C +G 
Sbjct: 426 MQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485

Query: 569 VHKAMTFFCQMVEKGF 584
            H+    + +M ++G 
Sbjct: 486 QHEVEALYTKMKQEGL 501



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 230/436 (52%), Gaps = 3/436 (0%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           +HDA+ +  +M +     SI  +N LL     ++  D++  L   ++V     ++YT +I
Sbjct: 66  LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           VI+  C   ++  A+  L +     + P  V++ ++++ +C+      A  L   M++ G
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  +YN +I  LC    + +AL+F  ++GR G+ P+ +TY+ L  G     + + A 
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA 245

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++++ ++ +   P+++TY+ L+  + + G V E  ++ E M+      +++ YS L++ +
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C   RIDEA  +   M + G  PD+V+Y+ LI G CK  +V   ++L+ +M  + +  N+
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNT 365

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  ++ G  +   + +A+ +F  +       D+  YNI++ G    G + +A+ ++  
Sbjct: 366 VTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFED 425

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + +  +   IVT+ ++I G CK GKV DA  L  ++ L GL+P  VTYTT M+  C +G 
Sbjct: 426 MQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485

Query: 429 IQRLLALLQEMETKAI 444
              + AL  +M+ + +
Sbjct: 486 QHEVEALYTKMKQEGL 501



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 199/388 (51%), Gaps = 31/388 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + R   V DAV ++ KM E+  +  I  YN+++ +L   R  +   D + +I       N
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPN 224

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +++GLC   R  DA   L++   ++  P+V++ +A++  + K G    AK +F 
Sbjct: 225 VVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFE 284

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M++  + PD  +Y+ LI+GLC+   ++EA +  + M   G  PD ++Y+ L  GF    
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAK 344

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++    K+ +K+  +G   + VTY  LI G+ Q+G+V++  +    M S G   ++  Y+
Sbjct: 345 RVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYN 404

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +LL  +C +G +++AL +  +M+   +  D+VTY+ +I+G+CK  KV  A  L+  +  K
Sbjct: 405 ILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLK 464

Query: 303 RISPNSFAHGAILLGLCEK-----------EMITEARMYFDSLIMSNCIQDVVLYNIMID 351
            + P+   +  ++ GLC K           +M  E  M  DS++   C+ D         
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSML---CLGD--------- 512

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIV 379
                G+I  + +L ++++    +PS++
Sbjct: 513 -----GDITISAELIKKMLSCGYAPSLL 535



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 156/335 (46%), Gaps = 15/335 (4%)

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           K+H AI L+ EM   R  P+      +L  + + +           + +     D+  +N
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           I+I+ +     +  A+ +  ++++    P  VT  SL+ GFC+  +V+DA  L+D +   
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G  P  V Y   +++ C+   +   L   +E+  K I P  VTYT ++ GLC   +  +A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            +LL DM    +TP+ ITY+ ++ +F K   + +A ++  +M   +++P   TY+ LI+G
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG---- 583
           LC++  +  A+ +   +         V+Y T+I   C    V   M  F +M ++G    
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNN 364

Query: 584 -----------FEISIRDYTKSFFCMMLSNGFPPD 607
                      F++   D  + FF  M S G  PD
Sbjct: 365 TVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPD 399



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 15/302 (4%)

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A+ L+R++++ R  PSIV FN L+    K  K      L   +++ G+     T+   +
Sbjct: 68  DAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N +C    +   L++L +M      P  VT   ++ G C++ ++ +AV L++ M  IG  
Sbjct: 128 NCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYR 187

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD + YN II S CK + +  A     ++    + P   TY  L++GLC +G   +A  L
Sbjct: 188 PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARL 247

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
           L  + +  I+   + Y+ ++ A    G V +A   F +MV    +  I  Y+        
Sbjct: 248 LRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCL 307

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                     F +M+S G  PD      ++  F +   +    +L   M + GL+ +   
Sbjct: 308 HDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVT 367

Query: 646 IN 647
            N
Sbjct: 368 YN 369


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 174/668 (26%), Positives = 307/668 (45%), Gaps = 41/668 (6%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVS 57
           L   Y+  GM   A  +  + +E    +   T+ + L  L      WD    LYD++   
Sbjct: 194 LVATYADAGMEAKAAEMCQRAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAE 253

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E+  + Y+  +++ GLC +  ++  +  ++   G    P+ V  N ++  YC+ G  +V 
Sbjct: 254 ESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRG--DVG 311

Query: 118 KGLFCL--MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
           +G+  L  M   GL P   +Y  L+  L   G +E+     ++M    + P+   Y+ + 
Sbjct: 312 RGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVI 371

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                    S A  V++++   G DPD +T++ LI G CQ G V+E  +L          
Sbjct: 372 DALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELN 431

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            N+ +Y+ L+   C  G +  A  LL EM   G  PD+VT+  LI GL    +V +A+ +
Sbjct: 432 PNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLV 491

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
             +M ++++ P++  +  ++ GLC+K+M+  AR   + ++  N   D  +Y  +IDG+++
Sbjct: 492 REKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIR 551

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
             ++ EA +++  + +K I P +V +N++I G+C+ G + +A   + T++  G  P   T
Sbjct: 552 NESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFT 611

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           YTT +  Y ++GNI   L+LL +M  +   P  V Y+ +I G CK      A  L   M 
Sbjct: 612 YTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSME 671

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN-GDL 534
             G+ P+ ITY  +I S  K   + +A      M L+   P   T + L+ GLC +   +
Sbjct: 672 SQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASI 731

Query: 535 KNADC--------------LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
            ++ C              +  +L          AY  II + C    + +A+    +M 
Sbjct: 732 ISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMA 791

Query: 581 EKGFEISIRDYTKSF--FC---------MMLSNGFPPDQ-EICEVMLIAFHQ------GG 622
            KG++     +      FC          +L N F  D+ E+     I F Q      G 
Sbjct: 792 NKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEFQRDELEVASRYKILFDQYVVKSVGC 851

Query: 623 DLGSVFEL 630
           ++ SVF+L
Sbjct: 852 EVYSVFQL 859



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 171/390 (43%), Gaps = 20/390 (5%)

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D+A  L  EM A     D  +  +++RGLC +  V K ++L          PN+  +  +
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G C +  +    +    +     +  VV Y  ++    + G++ +   L  ++ E+R+
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P++  +NS+I   CK    + A  +L  +   G +P A+T++T ++  C+EG +Q    
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           LL+E     + P   +YT +I G C + ++  A  LL +M   G TPD +T+  +I    
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
               + +A  +  +M    L P +  YN+LI GLC    L  A  L+  + E N+   K 
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
            YTT+I        + +A   F  M +KG    +  Y                      M
Sbjct: 541 VYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYN--------------------AM 580

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           +  + Q G +    E  + M K G +PD+F
Sbjct: 581 IKGYCQFGMMNEAVECMSTMRKVGRIPDEF 610


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 250/540 (46%), Gaps = 20/540 (3%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           +A++    +LG        +  ML  G+ P+   YN +I+ LC  G++ +A      +  
Sbjct: 184 SALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFE 243

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
             + PD  TY+ +  G      +  A +V  ++  +G +P+ VTY+ LI G C  G V E
Sbjct: 244 SEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNE 303

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
              L   M+  G        +  + ++C  G  ++A  L  +M+  G +P++ TY+ LI 
Sbjct: 304 AFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALIS 363

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           GLC    +  AI L++ M    + PN+  + A++  L E   I  A +  + +  + C  
Sbjct: 364 GLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSP 423

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           ++V YN MI GY  LG+  +A+ +   ++++  S ++VT+N++I G+C +G    A R+L
Sbjct: 424 NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           D ++  G +P   +YT  +  +C+   ++    L  EM    + P  VTYT +I G CK 
Sbjct: 484 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD 543

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            KL  A  LLE M   G  P+  TYN +I    K  +   A +L   M    + P   TY
Sbjct: 544 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 603

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
             +IDGLC NG    A  +   + E       + Y+++I+A   EG V +A   F ++  
Sbjct: 604 TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                               +G  PD+     M+ A+   G +   F     MIK+G  P
Sbjct: 664 --------------------HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 703



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 248/496 (50%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+++  NA+++  CK G    A+ +   + +  + PD F+Y  +I G C    ++ AL+ 
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            N M + G EP+ +TYS L  G     +++ A+ +I+++++ G  P   T T  I   C 
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +G  E+  +L   M ++G + NV  Y+ L+S +C SG +  A+GL + M   G+ P+ VT
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI  L +  ++  A  + N M     SPN   +  ++ G C      +A +  ++++
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 ++V YN +I GY   GN   A+++   + +    P   ++  LI GFCK  K+ 
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L + +   GL P+ VTYT  ++ YC++  +    +LL+ M+     P   TY V+I
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GL KQ     A +L + M   G+ P+ +TY  +I   CK      A ++ N+M      
Sbjct: 573 HGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL 632

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TY+ LI  L   G ++ A+ L   L+ H +   ++ Y  +I+A+   G V  A  F
Sbjct: 633 PNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNF 692

Query: 576 FCQMVEKGFEISIRDY 591
             +M++ G + ++  Y
Sbjct: 693 LGRMIKAGCQPTLWTY 708



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 175/632 (27%), Positives = 290/632 (45%), Gaps = 54/632 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL--YNLRHT-DIMWDLYDDIKVSETPRNVY 64
           + G V DA  ++ K+ E ++     TY S++  +  +H  D    +++ +       N  
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 65  TNSIVIDGLCQQSRLQDAILFLQE--------TA-------------------------- 90
           T S +I+GLC   R+ +A   ++E        TA                          
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 91  -GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             K   P+V +  A++S  C  G  +VA GLF  M + G+ P+  +YN LI+ L     +
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           + A    N MGR+G  P+ +TY+ + KG+ +L     A  V+  +L +G   ++VTY  +
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I GYC  GN    L++ ++M   G K +  +Y+ L+   CK  +++ A GL  EM   GL
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P+ VTY+ LI G CK +K+  A  L   M      PN   +  ++ GL ++   + A  
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               +I      +VV Y  MIDG  K G+   A++++ ++IE+   P+++T++SLI    
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALG 646

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           + GKV +A  L   ++ HGL P  +TY   + AY   G ++     L  M      PT  
Sbjct: 647 QEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLW 706

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY V+IKGL  ++       LL D  +  + PD +       SF      + A  +++  
Sbjct: 707 TYGVLIKGLKNEY-------LLADQRLAAL-PDVVPNC----SFGYQTTDQDAVSVMSAK 754

Query: 510 WLHNLEP--TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            L  L+P  +    N L+  L   G    A+ LL S+    +   + AY +++ +     
Sbjct: 755 -LAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 813

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           +V  AM  F  M  +G E+ +  Y K   C +
Sbjct: 814 NVDLAMGVFKHMSTQGCEVHLNGY-KELICAL 844



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/560 (26%), Positives = 267/560 (47%), Gaps = 4/560 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRN 62
           +S+  M     F +  + +  L++ +  Y++LL +L     T  + D Y  +       N
Sbjct: 156 HSKEAMARTMSF-LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           +   + VI+ LC+   + DA   +++    E  P   +  +++  +C+    + A  +F 
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K G  P+  +Y+ LI+GLC +G + EA +   +M  HG+ P A T +        + 
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               AW++   +  KG +P++ TYT LI G C  G ++  + L   M   G   N + Y+
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++ + ++ RI  A  +L  M   G  P++VTY+ +I+G C      KA+ + N M  +
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             S N   +  I+ G C+    T A    D +    C  D   Y  +I G+ K+  +  A
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L+ ++++  + P+ VT+ +LI G+CK+ K+  A  LL+ +K  G  P+  TY   ++ 
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
             ++ N      L + M  + I P  VTYT +I GLCK      A+++   M   G  P+
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TY+++IR+  +   + +A  L  ++  H L P   TY  +I+   ++G +++A   L 
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694

Query: 543 SLQEHNISLTKVAYTTIIKA 562
            + +     T   Y  +IK 
Sbjct: 695 RMIKAGCQPTLWTYGVLIKG 714



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 184/390 (47%), Gaps = 15/390 (3%)

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL+  L  YS L+  L +       +  Y+ M S+ + PN   + A++  LC+   + +A
Sbjct: 175 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA 234

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                 +  S    D   Y  MI G+ +  ++  A+Q++ Q+ ++   P+ VT+++LI G
Sbjct: 235 ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLING 294

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            C +G+V +A  L+  + LHG+ P+A T T  + A C+ G  +    L  +M+ K   P 
Sbjct: 295 LCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPN 354

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TYT +I GLC    L+ A+ L   M   GV P+ +TYN +I    + + ++ AF +LN
Sbjct: 355 VYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLN 414

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M  +   P   TYN +I G C+ GD K A  ++ ++ +   S   V Y TIIK +C  G
Sbjct: 415 LMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSG 474

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICE 612
           +   A+     M + G +     YT+                 F  M+ +G  P++    
Sbjct: 475 NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYT 534

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            ++  + +   L +   L   M +SG  P+
Sbjct: 535 ALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 187/463 (40%), Gaps = 61/463 (13%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+ T + +I G C       A+  L         P   S   ++  +CK+   E A GLF
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  GL P+  +Y  LI G C    ++ A      M R G  P+  TY++L  G    
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           +  SGA ++ + ++ +G  P++VTYT +I G C+ G+    L++   M+ QG   N++ Y
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S L+ ++ + G+++EA  L  E+E  GL PD +TY  +I       KV  A      M  
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-------QDVV---------- 344
               P  + +G ++ GL  + ++ + R+     ++ NC        QD V          
Sbjct: 699 AGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 758

Query: 345 -------LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL------------- 384
                  + N ++      G   EA +L   +I + + P    +NSL             
Sbjct: 759 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLA 818

Query: 385 ----------------------IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
                                 I   C+  +  +AR   + + +    P  V     ++ 
Sbjct: 819 MGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 878

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ--WK 463
              +G     +  L  MET+   P+   YT++ +   K+  WK
Sbjct: 879 LLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKRSWK 921



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 163/357 (45%), Gaps = 24/357 (6%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D    L + +K S    NV T +++I GL +Q+    A    +    +   P+VV+  A+
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +   CK G   +A  +F  M++ G  P+  +Y+ LI  L   G +EEA     ++ RHG+
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY----------- 213
            PD ITY  + + + +  ++  A+  + +++  G  P + TY VLI G            
Sbjct: 667 IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRL 726

Query: 214 ---------CQIGNVEEGLKLREVMLSQGFKLN----VIAYSVLLSSMCKSGRIDEALGL 260
                    C  G          VM ++  +L+    V   + L+S++  +GR  EA  L
Sbjct: 727 AALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANEL 786

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L  M + GL PD   Y+ L+  L +   V  A+ ++  M ++    +   +  ++  LC+
Sbjct: 787 LGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQ 846

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
                EAR+ F++++M     D V+  ++IDG ++ G     ++    +  +R  PS
Sbjct: 847 LHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 243/496 (48%), Gaps = 40/496 (8%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+     PDAF++ IL+ GLC +  +E+A +    M   G  PD   Y+ L  G+     
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A+K + +++     P +VTYT ++ G C+ G  ++ +KL + M  +G   N+  Y+V
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++  +C+  ++DEA  +L EM   G  PD+VTY+  I+GLCK D+V +A +    M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK-------- 355
           ++P+  ++  ++ GLC+   +  A    D +    C  DVV Y+ +IDG+ K        
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 356 ---------------------------LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
                                      LG+IG+A  +  ++  +  +P +V++N+ I G 
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           CK  +V  A+ + D +   G  P+A +Y+  +   C++  +   + L+++   K      
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDI 357

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV-TPDQITYNTIIRSFCKCKDLRKAFQLLN 507
           + YTV++ GLCK  +  EA  L   +    +  PD   YN ++ S CK + + KA Q+  
Sbjct: 358 LLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHK 417

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           QM   N      T+NIL+ GLCV+  L +A+ +L+++ +       V Y T++ A C  G
Sbjct: 418 QMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCG 476

Query: 568 DVHKAMTFFCQMVEKG 583
               A+  F + V+ G
Sbjct: 477 KSAAALELFEEAVKGG 492



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 164/614 (26%), Positives = 290/614 (47%), Gaps = 55/614 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRN----- 62
           R+  +  A  ++ +MKE+        YN+L+            +  +  +E  +N     
Sbjct: 22  RSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFL--AEMVKNHCLPT 79

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + ++DGLC+  R +DA+  L E   K   P++ + N I+   C+    + AK +  
Sbjct: 80  VVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLE 139

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G  PD  +YN  I GLC    ++EA +F   + R  V PD ++Y+ +  G     
Sbjct: 140 EMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSG 196

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A +++ ++  +G  PD+VTY+ LI G+C+ G VE  + L + ML  G + N++AY+
Sbjct: 197 DLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYN 256

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            LL ++ + G I +A  +L EME  G  PD+V+Y+  I GLCK ++V KA  +++ M  +
Sbjct: 257 SLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER 316

Query: 303 RISPNSFAHGAILLGLCEKE-------MITEAR------------MYFDSLIMSN----- 338
             +PN+ ++  ++  LC+K+       ++ +AR            +  D L         
Sbjct: 317 GCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEA 376

Query: 339 ------------CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
                       C  DV  YN+M+D + K   I +A+Q+++Q++E+    ++VT+N L++
Sbjct: 377 CALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVH 435

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G C + +++DA  +L T+   G  P  VTY T ++A C+ G     L L +E       P
Sbjct: 436 GLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVP 495

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             VTY+ +I GL  +        + E+ Y++    D   +N +I  + +        +L 
Sbjct: 496 DVVTYSALITGLVHE-------NMAEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLF 548

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGD-LKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
            ++   ++EP + T+   I G  V  + L  A  L     +           T+I     
Sbjct: 549 VELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAK 608

Query: 566 EGDVHKAMTFFCQM 579
            GD+ +A   F  M
Sbjct: 609 CGDLEEARRIFYSM 622



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 149/294 (50%), Gaps = 3/294 (1%)

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  K   P++F    +L GLC    + +AR     +    C+ D  +YN +I GY K  +
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
            G+A +   ++++    P++VT+ +++ G CK G+  DA +LLD ++  G  P+  TY  
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +   CEE  +     +L+EM  +   P  VTY   IKGLCK  ++ EA + L  M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           VTPD ++Y T+I   CK  DL  A ++L+QM      P   TY+ LIDG C  G+++ A 
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            LL S+ +       VAY +++ A    G + KA     +M  +GF   +  Y 
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYN 291



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 198/483 (40%), Gaps = 115/483 (23%)

Query: 30  SIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
            + TYNS +  L   D + +    +       +V + + VI+GLC+   L  A   L + 
Sbjct: 149 DVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQM 208

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG--------------LH----- 130
             +   P VV+ ++++  +CK G  E A GL   MLK G              LH     
Sbjct: 209 TNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHI 268

Query: 131 ----------------PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
                           PD  SYN  I GLC A  +++A    + M   G  P+A +YS+L
Sbjct: 269 GKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSML 328

Query: 175 AK----------GFHLLSQISGAWKVIQKLL--------IKGS----------------- 199
            +             L+ Q    ++++  LL         KG                  
Sbjct: 329 VEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKI 388

Query: 200 -DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
            +PD+  Y V++  +C+   +++ L++ + ML +    NV+ +++L+  +C   R+ +A 
Sbjct: 389 CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAE 447

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +L  M   G  PD VTY  L+  +CK  K   A++L+ E       P+   + A++ GL
Sbjct: 448 TMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGL 507

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
             + M  EA + F  L       DV L+N MI GY + G+    ++L+ +LIE  + P+ 
Sbjct: 508 VHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNA 560

Query: 379 VTF------------------------------------NSLIYGFCKNGKVADARRLLD 402
            TF                                    N+LI  F K G + +ARR+  
Sbjct: 561 RTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFY 620

Query: 403 TIK 405
           ++K
Sbjct: 621 SMK 623



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 23/279 (8%)

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +I+K   P   TF  L+ G C++ ++  AR+LL  +K  G  P    Y   ++ Y +  +
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
             +    L EM      PT VTYT ++ GLCK  + ++AV+LL++M   G +P+  TYN 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           I+   C+ + L +A ++L +M +    P   TYN  I GLC    +  A   L  +    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ 608
           ++   V+YTT+I   C  GD+  A     QM  +G    +  Y+                
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSS--------------- 222

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                ++  F +GG++     L   M+K G  P+    N
Sbjct: 223 -----LIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYN 256


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 235/454 (51%), Gaps = 1/454 (0%)

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           + H  C +G+  E+L     M R G  PD I  + L KGF  L  I  A +V++ +L K 
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKF 153

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD+  Y  LI G+C++  +++  ++ + M S+ F  + + Y++++ S+C  G++D AL
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +L ++ +   +P ++TY+ILI     +  V +A++L +EM S+ + P+ F +  I+ G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++ M+  A     +L +     DV+ YNI++   +  G   E  +L  ++  ++  P++
Sbjct: 274 CKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VT++ LI   C++GK+ +A  LL  +K  GL P A +Y   + A+C EG +   +  L+ 
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M +    P  V Y  V+  LCK  K  +A+++   +  +G +P+  +YNT+  +     D
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
             +A  ++ +M  + ++P   TYN +I  LC  G +  A  LLV ++      + V Y  
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           ++   C    +  A+     MV  G   +   YT
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 225/459 (49%), Gaps = 1/459 (0%)

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           C+     +++  L+    K + P V+    ++  +  L     A  +  ++ K+G  PD 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
           F+YN LI+G C    +++A    + M      PD +TY+I+        ++  A KV+ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           LL     P ++TYT+LI      G V+E LKL + MLS+G K ++  Y+ ++  MCK G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +D A  ++  +E  G +PD+++Y+IL+R L  Q K  +  +L  +M S++  PN   +  
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++  LC    I EA      +       D   Y+ +I  + + G +  A++    +I   
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
             P IV +N+++   CKNGK   A  +   +   G  P++ +Y T  +A    G+  R L
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            ++ EM +  I P  +TY  +I  LC++  + EA +LL DM      P  +TYN ++  F
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           CK   +  A  +L  M  +   P   TY +LI+G+   G
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 223/446 (50%), Gaps = 11/446 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+  + +I+G C+ +R+ DA   L     K+F P  V+ N ++   C  G  ++A  + 
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +L     P   +Y ILI    + G ++EAL+  ++M   G++PD  TY+ + +G    
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A+++++ L +KGS+PD+++Y +L+      G  EEG KL   M S+    NV+ Y
Sbjct: 277 GMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S+L++++C+ G+I+EA+ LL  M+  GL PD  +Y  LI   C++ ++  AI+    M S
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               P+   +  +L  LC+     +A   F  L    C  +   YN M       G+   
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ +  +++   I P  +T+NS+I   C+ G V +A  LL  ++     PS VTY   + 
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C+   I+  + +L+ M      P   TYTV+I+G+       EA++L  D+  I    
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI---- 572

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLN 507
           D I+  +  R       L + F LLN
Sbjct: 573 DAISEYSFKR-------LHRTFPLLN 591



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 226/419 (53%), Gaps = 1/419 (0%)

Query: 92  KEFG-PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
           ++FG P V + NA+++ +CK+   + A  +   M      PD  +YNI+I  LC  G ++
Sbjct: 151 EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            AL+  N +     +P  ITY+IL +   L   +  A K++ ++L +G  PD+ TY  +I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C+ G V+   ++   +  +G + +VI+Y++LL ++   G+ +E   L+ +M +    
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P++VTYSILI  LC+  K+ +A+ L   M  K ++P+++++  ++   C +  +  A  +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            +++I   C+ D+V YN ++    K G   +A++++ +L E   SP+  ++N++      
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           +G    A  ++  +  +G++P  +TY + ++  C EG +     LL +M +    P+ VT
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           Y +V+ G CK  ++++A+ +LE M   G  P++ TY  +I          +A +L N +
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 214/445 (48%), Gaps = 16/445 (3%)

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+ GN  E L L E M+ +G+  +VI  + L+        I +A+ ++  +E  G +PD+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
             Y+ LI G CK +++  A ++ + M SK  SP++  +  ++  LC +  +  A    + 
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L+  NC   V+ Y I+I+  +  G + EA++L  +++ + + P + T+N++I G CK G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V  A  ++  ++L G EP  ++Y   + A   +G  +    L+ +M ++   P  VTY++
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I  LC+  K++EA+ LL+ M   G+TPD  +Y+ +I +FC+   L  A + L  M    
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
             P    YN ++  LC NG    A  +   L E   S    +Y T+  A  + GD  +A+
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAF 618
               +M+  G +     Y     C+               M S  F P      ++L+ F
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDK 643
            +   +     +   M+ +G  P++
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNE 543



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 184/414 (44%), Gaps = 51/414 (12%)

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C+SG   E+L LL  M   G  PD++  + LI+G      + KA+++  E+  K   P+ 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           FA                                   YN +I+G+ K+  I +A ++  +
Sbjct: 159 FA-----------------------------------YNALINGFCKMNRIDDATRVLDR 183

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  K  SP  VT+N +I   C  GK+  A ++L+ +     +P+ +TYT  + A   EG 
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +   L L+ EM ++ + P   TY  +I+G+CK+  +  A +++ ++ + G  PD I+YN 
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNI 303

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           ++R+        +  +L+ +M+    +P   TY+ILI  LC +G ++ A  LL  ++E  
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--------------- 593
           ++    +Y  +I A C EG +  A+ F   M+  G    I +Y                 
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             F  +   G  P+      M  A    GD      +   M+ +G+ PD+   N
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 154/312 (49%), Gaps = 3/312 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G V +A+ ++ +M    LK  + TYN+++  +      D  +++  ++++  +  +V + 
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISY 301

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I++  L  Q + ++    + +   ++  P+VV+ + +++  C+ G  E A  L  LM +
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL PDA+SY+ LI   C  G ++ A+EF   M   G  PD + Y+ +        +   
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A ++  KL   G  P+  +Y  +       G+    L +   M+S G   + I Y+ ++S
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C+ G +DEA  LL +M +    P +VTY+I++ G CK  ++  AI +   M      P
Sbjct: 482 CLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRP 541

Query: 307 NSFAHGAILLGL 318
           N   +  ++ G+
Sbjct: 542 NETTYTVLIEGI 553



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 34/190 (17%)

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI------------ 484
           ++  ++++G        +    C+     E++ LLE M   G  PD I            
Sbjct: 78  RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137

Query: 485 ----------------------TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
                                  YN +I  FCK   +  A ++L++M   +  P + TYN
Sbjct: 138 RNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 197

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           I+I  LC  G L  A  +L  L   N   T + YT +I+A   EG V +A+    +M+ +
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257

Query: 583 GFEISIRDYT 592
           G +  +  Y 
Sbjct: 258 GLKPDMFTYN 267


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 250/540 (46%), Gaps = 20/540 (3%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           +A++    +LG        +  ML  G+ P+   YN +I+ LC  G++ +A      +  
Sbjct: 184 SALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFE 243

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
             + PD  TY+ +  G      +  A +V  ++  +G +P+ VTY+ LI G C  G V E
Sbjct: 244 SEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNE 303

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
              L   M+  G        +  + ++C  G  ++A  L  +M+  G +P++ TY+ LI 
Sbjct: 304 AFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALIS 363

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           GLC    +  AI L++ M    + PN+  + A++  L E   I  A +  + +  + C  
Sbjct: 364 GLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSP 423

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           ++V YN MI GY  LG+  +A+ +   ++++  S ++VT+N++I G+C +G    A R+L
Sbjct: 424 NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           D ++  G +P   +YT  +  +C+   ++    L  EM    + P  VTYT +I G CK 
Sbjct: 484 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD 543

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            KL  A  LLE M   G  P+  TYN +I    K  +   A +L   M    + P   TY
Sbjct: 544 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 603

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
             +IDGLC NG    A  +   + E       + Y+++I+A   EG V +A   F ++  
Sbjct: 604 TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                               +G  PD+     M+ A+   G +   F     MIK+G  P
Sbjct: 664 --------------------HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 703



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 248/496 (50%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+++  NA+++  CK G    A+ +   + +  + PD F+Y  +I G C    ++ AL+ 
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            N M + G EP+ +TYS L  G     +++ A+ +I+++++ G  P   T T  I   C 
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +G  E+  +L   M ++G + NV  Y+ L+S +C SG +  A+GL + M   G+ P+ VT
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI  L +  ++  A  + N M     SPN   +  ++ G C      +A +  ++++
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 ++V YN +I GY   GN   A+++   + +    P   ++  LI GFCK  K+ 
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L + +   GL P+ VTYT  ++ YC++  +    +LL+ M+     P   TY V+I
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GL KQ     A +L + M   G+ P+ +TY  +I   CK      A ++ N+M      
Sbjct: 573 HGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL 632

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TY+ LI  L   G ++ A+ L   L+ H +   ++ Y  +I+A+   G V  A  F
Sbjct: 633 PNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNF 692

Query: 576 FCQMVEKGFEISIRDY 591
             +M++ G + ++  Y
Sbjct: 693 LGRMIKAGCQPTLWTY 708



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 175/632 (27%), Positives = 290/632 (45%), Gaps = 54/632 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL--YNLRHT-DIMWDLYDDIKVSETPRNVY 64
           + G V DA  ++ K+ E ++     TY S++  +  +H  D    +++ +       N  
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 65  TNSIVIDGLCQQSRLQDAILFLQE--------TA-------------------------- 90
           T S +I+GLC   R+ +A   ++E        TA                          
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 91  -GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             K   P+V +  A++S  C  G  +VA GLF  M + G+ P+  +YN LI+ L     +
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           + A    N MGR+G  P+ +TY+ + KG+ +L     A  V+  +L +G   ++VTY  +
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I GYC  GN    L++ ++M   G K +  +Y+ L+   CK  +++ A GL  EM   GL
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P+ VTY+ LI G CK +K+  A  L   M      PN   +  ++ GL ++   + A  
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               +I      +VV Y  MIDG  K G+   A++++ ++IE+   P+++T++SLI    
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALG 646

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           + GKV +A  L   ++ HGL P  +TY   + AY   G ++     L  M      PT  
Sbjct: 647 QEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLW 706

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY V+IKGL  ++       LL D  +  + PD +       SF      + A  +++  
Sbjct: 707 TYGVLIKGLKNEY-------LLADQRLAAL-PDVVPNC----SFGYQTTDQDAVSVMSAK 754

Query: 510 WLHNLEP--TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            L  L+P  +    N L+  L   G    A+ LL S+    +   + AY +++ +     
Sbjct: 755 -LAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 813

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           +V  AM  F  M  +G E+ +  Y K   C +
Sbjct: 814 NVDLAMGVFKHMSTQGCEVHLNGY-KELICAL 844



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/560 (26%), Positives = 267/560 (47%), Gaps = 4/560 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRN 62
           +S+  M     F +  + +  L++ +  Y++LL +L     T  + D Y  +       N
Sbjct: 156 HSKEAMARTMSF-LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           +   + VI+ LC+   + DA   +++    E  P   +  +++  +C+    + A  +F 
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K G  P+  +Y+ LI+GLC +G + EA +   +M  HG+ P A T +        + 
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               AW++   +  KG +P++ TYT LI G C  G ++  + L   M   G   N + Y+
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++ + ++ RI  A  +L  M   G  P++VTY+ +I+G C      KA+ + N M  +
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             S N   +  I+ G C+    T A    D +    C  D   Y  +I G+ K+  +  A
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L+ ++++  + P+ VT+ +LI G+CK+ K+  A  LL+ +K  G  P+  TY   ++ 
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
             ++ N      L + M  + I P  VTYT +I GLCK      A+++   M   G  P+
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TY+++IR+  +   + +A  L  ++  H L P   TY  +I+   ++G +++A   L 
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694

Query: 543 SLQEHNISLTKVAYTTIIKA 562
            + +     T   Y  +IK 
Sbjct: 695 RMIKAGCQPTLWTYGVLIKG 714



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 184/390 (47%), Gaps = 15/390 (3%)

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL+  L  YS L+  L +       +  Y+ M S+ + PN   + A++  LC+   + +A
Sbjct: 175 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA 234

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                 +  S    D   Y  MI G+ +  ++  A+Q++ Q+ ++   P+ VT+++LI G
Sbjct: 235 ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLING 294

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            C +G+V +A  L+  + LHG+ P+A T T  + A C+ G  +    L  +M+ K   P 
Sbjct: 295 LCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPN 354

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TYT +I GLC    L+ A+ L   M   GV P+ +TYN +I    + + ++ AF +LN
Sbjct: 355 VYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLN 414

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M  +   P   TYN +I G C+ GD K A  ++ ++ +   S   V Y TIIK +C  G
Sbjct: 415 LMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSG 474

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICE 612
           +   A+     M + G +     YT+                 F  M+ +G  P++    
Sbjct: 475 NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYT 534

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            ++  + +   L +   L   M +SG  P+
Sbjct: 535 ALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 185/459 (40%), Gaps = 59/459 (12%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+ T + +I G C       A+  L         P   S   ++  +CK+   E A GLF
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  GL P+  +Y  LI G C    ++ A      M R G  P+  TY++L  G    
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           +  SGA ++ + ++ +G  P++VTYT +I G C+ G+    L++   M+ QG   N++ Y
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S L+ ++ + G+++EA  L  E+E  GL PD +TY  +I       KV  A      M  
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-------QDVV---------- 344
               P  + +G ++ GL  + ++ + R+     ++ NC        QD V          
Sbjct: 699 AGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 758

Query: 345 -------LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL------------- 384
                  + N ++      G   EA +L   +I + + P    +NSL             
Sbjct: 759 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLA 818

Query: 385 ----------------------IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
                                 I   C+  +  +AR   + + +    P  V     ++ 
Sbjct: 819 MGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 878

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
              +G     +  L  MET+   P+   YT++ +   K+
Sbjct: 879 LLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKK 917



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 163/357 (45%), Gaps = 24/357 (6%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D    L + +K S    NV T +++I GL +Q+    A    +    +   P+VV+  A+
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +   CK G   +A  +F  M++ G  P+  +Y+ LI  L   G +EEA     ++ RHG+
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY----------- 213
            PD ITY  + + + +  ++  A+  + +++  G  P + TY VLI G            
Sbjct: 667 IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRL 726

Query: 214 ---------CQIGNVEEGLKLREVMLSQGFKLN----VIAYSVLLSSMCKSGRIDEALGL 260
                    C  G          VM ++  +L+    V   + L+S++  +GR  EA  L
Sbjct: 727 AALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANEL 786

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L  M + GL PD   Y+ L+  L +   V  A+ ++  M ++    +   +  ++  LC+
Sbjct: 787 LGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQ 846

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
                EAR+ F++++M     D V+  ++IDG ++ G     ++    +  +R  PS
Sbjct: 847 LHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 250/540 (46%), Gaps = 20/540 (3%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           +A++    +LG        +  ML  G+ P+   YN +I+ LC  G++ +A      +  
Sbjct: 184 SALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFE 243

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
             + PD  TY+ +  G      +  A +V  ++  +G +P+ VTY+ LI G C  G V E
Sbjct: 244 SEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNE 303

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
              L   M+  G        +  + ++C  G  ++A  L  +M+  G +P++ TY+ LI 
Sbjct: 304 AFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALIS 363

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           GLC    +  AI L++ M    + PN+  + A++  L E   I  A +  + +  + C  
Sbjct: 364 GLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSP 423

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           ++V YN MI GY  LG+  +A+ +   ++++  S ++VT+N++I G+C +G    A R+L
Sbjct: 424 NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           D ++  G +P   +YT  +  +C+   ++    L  EM    + P  VTYT +I G CK 
Sbjct: 484 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD 543

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            KL  A  LLE M   G  P+  TYN +I    K  +   A +L   M    + P   TY
Sbjct: 544 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 603

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
             +IDGLC NG    A  +   + E       + Y+++I+A   EG V +A   F ++  
Sbjct: 604 TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                               +G  PD+     M+ A+   G +   F     MIK+G  P
Sbjct: 664 --------------------HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 703



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 248/496 (50%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+++  NA+++  CK G    A+ +   + +  + PD F+Y  +I G C    ++ AL+ 
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            N M + G EP+ +TYS L  G     +++ A+ +I+++++ G  P   T T  I   C 
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +G  E+  +L   M ++G + NV  Y+ L+S +C SG +  A+GL + M   G+ P+ VT
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVT 392

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI  L +  ++  A  + N M     SPN   +  ++ G C      +A +  ++++
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 ++V YN +I GY   GN   A+++   + +    P   ++  LI GFCK  K+ 
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L + +   GL P+ VTYT  ++ YC++  +    +LL+ M+     P   TY V+I
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GL KQ     A +L + M   G+ P+ +TY  +I   CK      A ++ N+M      
Sbjct: 573 HGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL 632

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TY+ LI  L   G ++ A+ L   L+ H +   ++ Y  +I+A+   G V  A  F
Sbjct: 633 PNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNF 692

Query: 576 FCQMVEKGFEISIRDY 591
             +M++ G + ++  Y
Sbjct: 693 LGRMIKAGCQPTLWTY 708



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 175/632 (27%), Positives = 290/632 (45%), Gaps = 54/632 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL--YNLRHT-DIMWDLYDDIKVSETPRNVY 64
           + G V DA  ++ K+ E ++     TY S++  +  +H  D    +++ +       N  
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 65  TNSIVIDGLCQQSRLQDAILFLQE--------TA-------------------------- 90
           T S +I+GLC   R+ +A   ++E        TA                          
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 91  -GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             K   P+V +  A++S  C  G  +VA GLF  M + G+ P+  +YN LI+ L     +
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           + A    N MGR+G  P+ +TY+ + KG+ +L     A  V+  +L +G   ++VTY  +
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I GYC  GN    L++ ++M   G K +  +Y+ L+   CK  +++ A GL  EM   GL
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P+ VTY+ LI G CK +K+  A  L   M      PN   +  ++ GL ++   + A  
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               +I      +VV Y  MIDG  K G+   A++++ ++IE+   P+++T++SLI    
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALG 646

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           + GKV +A  L   ++ HGL P  +TY   + AY   G ++     L  M      PT  
Sbjct: 647 QEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLW 706

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY V+IKGL  ++       LL D  +  + PD +       SF      + A  +++  
Sbjct: 707 TYGVLIKGLKNEY-------LLADQRLAAL-PDVVPNC----SFGYQTTDQDAVSVMSAK 754

Query: 510 WLHNLEP--TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            L  L+P  +    N L+  L   G    A+ LL S+    +   + AY +++ +     
Sbjct: 755 -LAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 813

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           +V  AM  F  M  +G E+ +  Y K   C +
Sbjct: 814 NVDLAMGVFKHMSTQGCEVHLNGY-KELICAL 844



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/560 (26%), Positives = 267/560 (47%), Gaps = 4/560 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRN 62
           +S+  M     F +  + +  L++ +  Y++LL +L     T  + D Y  +       N
Sbjct: 156 HSKEAMARTMSF-LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           +   + VI+ LC+   + DA   +++    E  P   +  +++  +C+    + A  +F 
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K G  P+  +Y+ LI+GLC +G + EA +   +M  HG+ P A T +        + 
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               AW++   +  KG +P++ TYT LI G C  G ++  + L   M   G   N + Y+
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++ + ++ RI  A  +L  M   G  P++VTY+ +I+G C      KA+ + N M  +
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             S N   +  I+ G C+    T A    D +    C  D   Y  +I G+ K+  +  A
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L+ ++++  + P+ VT+ +LI G+CK+ K+  A  LL+ +K  G  P+  TY   ++ 
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
             ++ N      L + M  + I P  VTYT +I GLCK      A+++   M   G  P+
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TY+++IR+  +   + +A  L  ++  H L P   TY  +I+   ++G +++A   L 
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694

Query: 543 SLQEHNISLTKVAYTTIIKA 562
            + +     T   Y  +IK 
Sbjct: 695 RMIKAGCQPTLWTYGVLIKG 714



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 184/390 (47%), Gaps = 15/390 (3%)

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL+  L  YS L+  L +       +  Y+ M S+ + PN   + A++  LC+   + +A
Sbjct: 175 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA 234

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                 +  S    D   Y  MI G+ +  ++  A+Q++ Q+ ++   P+ VT+++LI G
Sbjct: 235 ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLING 294

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            C +G+V +A  L+  + LHG+ P+A T T  + A C+ G  +    L  +M+ K   P 
Sbjct: 295 LCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPN 354

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TYT +I GLC    L+ A+ L   M   GV P+ +TYN +I    + + ++ AF +LN
Sbjct: 355 VYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLN 414

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M  +   P   TYN +I G C+ GD K A  ++ ++ +   S   V Y TIIK +C  G
Sbjct: 415 LMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSG 474

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICE 612
           +   A+     M + G +     YT+                 F  M+ +G  P++    
Sbjct: 475 NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYT 534

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            ++  + +   L +   L   M +SG  P+
Sbjct: 535 ALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 185/459 (40%), Gaps = 59/459 (12%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+ T + +I G C       A+  L         P   S   ++  +CK+   E A GLF
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  GL P+  +Y  LI G C    ++ A      M R G  P+  TY++L  G    
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           +  SGA ++ + ++ +G  P++VTYT +I G C+ G+    L++   M+ QG   N++ Y
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S L+ ++ + G+++EA  L  E+E  GL PD +TY  +I       KV  A      M  
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-------QDVV---------- 344
               P  + +G ++ GL  + ++ + R+     ++ NC        QD V          
Sbjct: 699 AGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 758

Query: 345 -------LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL------------- 384
                  + N ++      G   EA +L   +I + + P    +NSL             
Sbjct: 759 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLA 818

Query: 385 ----------------------IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
                                 I   C+  +  +AR   + + +    P  V     ++ 
Sbjct: 819 MGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 878

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
              +G     +  L  MET+   P+   YT++ +   K+
Sbjct: 879 LLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKK 917



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 163/357 (45%), Gaps = 24/357 (6%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D    L + +K S    NV T +++I GL +Q+    A    +    +   P+VV+  A+
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +   CK G   +A  +F  M++ G  P+  +Y+ LI  L   G +EEA     ++ RHG+
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY----------- 213
            PD ITY  + + + +  ++  A+  + +++  G  P + TY VLI G            
Sbjct: 667 IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRL 726

Query: 214 ---------CQIGNVEEGLKLREVMLSQGFKLN----VIAYSVLLSSMCKSGRIDEALGL 260
                    C  G          VM ++  +L+    V   + L+S++  +GR  EA  L
Sbjct: 727 AALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANEL 786

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L  M + GL PD   Y+ L+  L +   V  A+ ++  M ++    +   +  ++  LC+
Sbjct: 787 LGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQ 846

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
                EAR+ F++++M     D V+  ++IDG ++ G     ++    +  +R  PS
Sbjct: 847 LHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 240/468 (51%), Gaps = 3/468 (0%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           L +   L++   FL+    K   P V++  A++  +CK+G  + A  +  ++ + G   D
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
             SYN+LI G C +G +EEAL     + R GV P+A TY  +        ++  A +V+ 
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRV---LDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           + L     PD+VT TVLI   C+   V + +KL   M ++G K +V+ Y+VL+   CK G
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           R+DEA+  L ++ + G +PD++++++++R LC   +   A++L   M  K   P+     
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC+K ++ +A    + +       +   +N +I G+     I  A++    ++ +
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P IVT+N L+   CK+GKV DA  +L  +   G  PS ++Y T ++   + G  +  
Sbjct: 386 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 445

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           + LL+EM  K + P  +T T V+ GL ++ K++EA++    +    + P+   YN+II  
Sbjct: 446 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITG 505

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            CK +    A   L  M     +PT ATY  LI G+   G  ++A  L
Sbjct: 506 LCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKL 553



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 223/461 (48%), Gaps = 3/461 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G  PD  +   LI   C  G  + A +    +   G   D  +Y++L  G+    +
Sbjct: 105 MTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGE 164

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I  A +V+ ++   G  P+  TY  ++C  C  G +++ +++    L      +V+  +V
Sbjct: 165 IEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTV 221

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+ + CK   + +A+ L  EM   G KPD+VTY++LI+G CK  ++ +AI+   ++ S  
Sbjct: 222 LIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG 281

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+  +H  IL  LC      +A     +++   C+  VV +NI+I+   + G +G+A+
Sbjct: 282 CQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKAL 341

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +   + +   +P+  +FN LI GFC    +  A   L+ +   G  P  VTY   + A 
Sbjct: 342 NVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTAL 401

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++G +   + +L ++ +K   P+ ++Y  VI GL K  K + AV+LLE+M   G+ PD 
Sbjct: 402 CKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDL 461

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           IT  +++    +   +R+A +  + +    + P +  YN +I GLC +     A   L  
Sbjct: 462 ITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLAD 521

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +       T+  YTT+IK    EG    A     ++  +G 
Sbjct: 522 MVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGL 562



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 216/446 (48%), Gaps = 3/446 (0%)

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G +EE   F   M   G  PD I  + L + F  + +   A +++  L   G+  D+ +Y
Sbjct: 93  GELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSY 152

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            VLI GYC+ G +EE L++ + M   G   N   Y  +L S+C  G++ +A+ +L     
Sbjct: 153 NVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQ 209

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
               PD+VT ++LI   CK+  V +A++L+NEM +K   P+   +  ++ G C+   + E
Sbjct: 210 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A  +   L    C  DV+ +N+++      G   +A++L   ++ K   PS+VTFN LI 
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILIN 329

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             C+ G +  A  +L+ +  HG  P++ ++   +  +C    I R +  L+ M ++   P
Sbjct: 330 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYP 389

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             VTY +++  LCK  K+ +AV +L  +   G +P  I+YNT+I    K      A +LL
Sbjct: 390 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 449

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +M    L+P   T   ++ GL   G ++ A      L+   I      Y +II   C  
Sbjct: 450 EEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKS 509

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYT 592
                A+ F   MV KG + +   YT
Sbjct: 510 QQTSLAIDFLADMVAKGCKPTEATYT 535



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 174/323 (53%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L+++++      +V T +++I G C+  RL +AI FL++       P V+S N I+   C
Sbjct: 238 LFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLC 297

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
             G    A  L   ML+ G  P   ++NILI+ LC  G + +AL     M +HG  P++ 
Sbjct: 298 SGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSR 357

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +++ L +GF     I  A + ++ ++ +G  PDIVTY +L+   C+ G V++ + +   +
Sbjct: 358 SFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQL 417

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
            S+G   ++I+Y+ ++  + K G+ + A+ LL EM   GLKPDL+T + ++ GL ++ KV
Sbjct: 418 SSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKV 477

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A++ ++ +    I PN+F + +I+ GLC+ +  + A  +   ++   C      Y  +
Sbjct: 478 REAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTL 537

Query: 350 IDGYVKLGNIGEAVQLYRQLIEK 372
           I G    G   +A +L  +L  +
Sbjct: 538 IKGITYEGLAEDASKLSNELYSR 560



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 145/319 (45%), Gaps = 23/319 (7%)

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           + E   + + +       DV+    +I  + K+G    A Q+   L E      + ++N 
Sbjct: 95  LEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNV 154

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI G+CK+G++ +A R+LD +   G+ P+A TY   + + C+ G +++ + +L       
Sbjct: 155 LISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSK 211

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             P  VT TV+I   CK+  + +A++L  +M   G  PD +TYN +I+ FCK   L +A 
Sbjct: 212 CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAI 271

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           + L ++  +  +P   ++N+++  LC  G   +A  LL ++       + V +  +I   
Sbjct: 272 RFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFL 331

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           C +G + KA+                    +   MM  +G  P+      ++  F  G  
Sbjct: 332 CQKGLLGKAL--------------------NVLEMMPKHGHTPNSRSFNPLIQGFCNGKG 371

Query: 624 LGSVFELAAVMIKSGLLPD 642
           +    E   +M+  G  PD
Sbjct: 372 IDRAIEYLEIMVSRGCYPD 390



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 23/258 (8%)

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           +NG++ +  R L+ +   G  P  +  T  +  +C+ G  +    ++  +E         
Sbjct: 91  RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           +Y V+I G CK  +++EA+++L+ M   GV+P+  TY+ ++ S C    L++A Q+L + 
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
                 P   T  +LID  C    +  A  L   ++        V Y  +IK  C  G +
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
            +A+ F  ++                     S G  PD     ++L +   GG      +
Sbjct: 268 DEAIRFLKKLP--------------------SYGCQPDVISHNMILRSLCSGGRWMDAMK 307

Query: 630 LAAVMIKSGLLPDKFLIN 647
           L A M++ G LP     N
Sbjct: 308 LLATMLRKGCLPSVVTFN 325



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 38/194 (19%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
           + G V DAV +++++       S+ +YN++   L  +   ++  +L +++       ++ 
Sbjct: 403 KDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLI 462

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + V+ GL ++ ++++A+ F                                   F  +
Sbjct: 463 TCTSVVGGLSREGKVREAMKF-----------------------------------FHYL 487

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            ++ + P+AF YN +I GLC +     A++F  DM   G +P   TY+ L KG       
Sbjct: 488 KRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLA 547

Query: 185 SGAWKVIQKLLIKG 198
             A K+  +L  +G
Sbjct: 548 EDASKLSNELYSRG 561


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 157/598 (26%), Positives = 267/598 (44%), Gaps = 19/598 (3%)

Query: 69  VIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK- 126
           +++GLC   R+ +A+ + LQ        P  VS N ++   C    AE A  L  +M   
Sbjct: 135 LLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADD 194

Query: 127 --YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             +   P+  SY+ +I+G    G +++      +M   G+ PD +TY+ +  G       
Sbjct: 195 QVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLF 254

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  V Q+++  G  P+I TY  LI GY  IG  +E +++ E M + G K N   Y  L
Sbjct: 255 DRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSL 314

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L+ +CK+GR  EA      M   G+KP + TY I++ G   +  + +   L N M +  I
Sbjct: 315 LNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGI 374

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SPN            +  +I +A   F+ +       D V Y  +ID   KLG + +A  
Sbjct: 375 SPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEV 434

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
            + Q+I + ++P IV F+SL+YG C   K      L   +   G+ P+ V + T +   C
Sbjct: 435 KFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLC 494

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +EG +     L+  +E   + P  ++Y  +I G C    + EA +LLE M  +G+ PD  
Sbjct: 495 KEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSF 554

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           +YNT++  +CK   +  A+    +M  + + P   TYN ++ GL        A  L +++
Sbjct: 555 SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 614

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI---------------R 589
                      Y  I+   C    V +A+  F  +  KG +++I               +
Sbjct: 615 INSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRK 674

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +     F  + +NG   +     +++    + G L     L + M K+G  P+  ++N
Sbjct: 675 EDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLN 732



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 179/712 (25%), Positives = 297/712 (41%), Gaps = 83/712 (11%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVYTNSIVIDGL 73
           V  +M +  +K +I TYN L++        W     + +++       N  T   +++ L
Sbjct: 260 VFQQMIDNGVKPNIDTYNCLIHGYLSIG-KWKEVVRMLEEMSAGGPKPNCCTYGSLLNYL 318

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVS--------------------------------- 100
           C+  R ++A  F     GK   PSV +                                 
Sbjct: 319 CKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNH 378

Query: 101 --LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
              N   S Y K G  + A  +F  M + GL PDA SY  LI  LC  G +++A    N 
Sbjct: 379 HIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQ 438

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M   GV PD + +S L  G   + +     ++  ++L  G  P+IV +  ++C  C+ G 
Sbjct: 439 MINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGR 498

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           V EG +L + +   G + +VI+Y+ L+   C +G IDEA  LL  M +VGLKPD  +Y+ 
Sbjct: 499 VMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNT 558

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           L+ G CK  ++  A   + +M S  I+P    +  IL GL + +  +EA+  + ++I S 
Sbjct: 559 LLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 618

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              D+  YNI+++G  K   + EA+++++ L  K +  +I+TFN +I    K G+  DA 
Sbjct: 619 TKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAM 678

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            L   I  +GL  + VTY   +    EEG+++   +L   ME     P       +++ L
Sbjct: 679 DLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRL 738

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC------------------------ 494
             +  +  A   L  +     + +  T + +I  F                         
Sbjct: 739 LHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSS 798

Query: 495 ----KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
               K + +  A+ L  +M +  L P   TYN ++ GL   G    A  L +S+      
Sbjct: 799 ALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQ 858

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI---------------RDYTKSF 595
           +    Y  I+   C    V +A   F  +  KG +++I               ++     
Sbjct: 859 MNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 918

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           F  + +NG  PD     ++     + G L     L   M KSG   D  L+N
Sbjct: 919 FAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLN 970



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/582 (25%), Positives = 271/582 (46%), Gaps = 8/582 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLY--DDIKVSETPR 61
           R G   D +  + +M EL       +YN LL  L    R  + +  L+   D +V   P 
Sbjct: 144 RVGEAMDVL--LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPP 201

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV + S VI+G   + ++        E   +   P VV+   ++   CK    + A+ +F
Sbjct: 202 NVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVF 261

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G+ P+  +YN LIHG    G  +E +    +M   G +P+  TY  L       
Sbjct: 262 QQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKN 321

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A      ++ KG  P + TY +++ GY   G + E   L  +M++ G   N   +
Sbjct: 322 GRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIF 381

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++  S+  K G ID+A+ +  +M   GL PD V+Y  LI  LCK  +V  A   +N+M +
Sbjct: 382 NIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN 441

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + ++P+     +++ GLC  +   +    F  ++      ++V +N ++    K G + E
Sbjct: 442 EGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVME 501

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
             +L   +    + P ++++N+LI G C  G + +A +LL+ +   GL+P + +Y T ++
Sbjct: 502 GQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLH 561

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC+ G I    +  ++M +  I P  VTY  ++ GL +  +  EA +L  +M   G   
Sbjct: 562 GYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKW 621

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D  TYN I+   CK   + +A ++   +    L+    T+NI+I  L   G  ++A  L 
Sbjct: 622 DIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLF 681

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            ++  + +    V Y  +++    EG + +  + F  M + G
Sbjct: 682 AAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNG 723



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 250/520 (48%), Gaps = 4/520 (0%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
            P+  + + ++  +C++G  E     F L+LK G   D    N L++GLC    + EA++
Sbjct: 91  APNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMD 150

Query: 155 -FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL---IKGSDPDIVTYTVLI 210
                M   G  PD ++Y+IL KG     +   A +++  +    +    P++V+Y+ +I
Sbjct: 151 VLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVI 210

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G+   G V++   L   M+ +G   +V+ Y+ ++  +CK+   D A  +  +M   G+K
Sbjct: 211 NGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVK 270

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P++ TY+ LI G     K  + +++  EM +    PN   +G++L  LC+     EAR +
Sbjct: 271 PNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFF 330

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           FDS+I       V  Y IM+ GY   G + E   L   ++   ISP+   FN     + K
Sbjct: 331 FDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAK 390

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G +  A  + + ++  GL P AV+Y   ++A C+ G +        +M  + + P  V 
Sbjct: 391 CGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVV 450

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           ++ ++ GLC   K ++  +L  +M  +G+ P+ + +NTI+ + CK   + +  +L++ + 
Sbjct: 451 FSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIE 510

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              + P   +YN LIDG C+ G +  A  LL  +    +     +Y T++  +C  G + 
Sbjct: 511 CMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRID 570

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEI 610
            A + F +M+  G    +  Y      +  +  F   +E+
Sbjct: 571 SAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKEL 610



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/604 (25%), Positives = 276/604 (45%), Gaps = 22/604 (3%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD-----LYDDIKVSETPRN 62
            + G V DA     +M    +   I  ++SL+Y L   D  W+      ++ + V   P  
Sbjct: 425  KLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVD-KWEKVEELFFEMLNVGIHPNI 483

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            V+ N+I+ + LC++ R+ +    +         P V+S N ++  +C  G  + A  L  
Sbjct: 484  VFFNTILCN-LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLE 542

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             M+  GL PD+FSYN L+HG C AG ++ A      M  +G+ P  +TY+ +  G     
Sbjct: 543  GMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTK 602

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            + S A ++   ++  G+  DI TY +++ G C+   V+E +K+ + + S+G +LN+I ++
Sbjct: 603  RFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFN 662

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +++ ++ K GR ++A+ L   + A GL  ++VTY +++  L ++  + +   L++ M   
Sbjct: 663  IMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKN 722

Query: 303  RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              +PNS    A++  L  +  I+ A  Y   L   N   +    +++I  +        A
Sbjct: 723  GTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHA 782

Query: 363  VQL---YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
              L   YR L E   S  I           K  ++ DA  L   + + GL P  VTY T 
Sbjct: 783  KSLPKKYRILNEANSSALIK----------KARRIDDAYSLFREMLMKGLTPDVVTYNTI 832

Query: 420  MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
            ++   + G       L   M          TY +++ GLCK   + EA ++ + +   G+
Sbjct: 833  LHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 892

Query: 480  TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
              + IT+N +I +  K      A  L   +  + L P   TY ++ + L   G L+  D 
Sbjct: 893  QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDG 952

Query: 540  LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
            L +++++    L       +++     GD+ +A  +  ++ EK F  S+   T S    +
Sbjct: 953  LFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNF--SLEASTTSELISL 1010

Query: 600  LSNG 603
             S G
Sbjct: 1011 FSRG 1014



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 221/470 (47%), Gaps = 27/470 (5%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG- 259
           P+  TY++LI  +C++G++E G     ++L  G++++ I  + LL+ +C   R+ EA+  
Sbjct: 92  PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI---SPNSFAHGAILL 316
           LL  M  +G  PD V+Y+IL++GLC + +  +A++L + M   ++    PN  ++  ++ 
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           G   +  + +    F  ++      DVV Y  +IDG  K      A  +++Q+I+  + P
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP 271

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           +I T+N LI+G+   GK  +  R+L+ +   G +P+  TY + +N  C+ G  +      
Sbjct: 272 NIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFF 331

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
             M  K I P+  TY +++ G   +  L E   LL  M   G++P+   +N    ++ KC
Sbjct: 332 DSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKC 391

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
             + KA  + N+M    L P + +Y  LID LC  G + +A+     +    ++   V +
Sbjct: 392 GIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVF 451

Query: 557 TTIIKAHCAEGD---------------VHKAMTFF----CQMVEKGFEISIRDYTKSFFC 597
           ++++   C                   +H  + FF    C + ++G  +  +    S  C
Sbjct: 452 SSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIEC 511

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           M    G  PD      ++      G +    +L   M+  GL PD F  N
Sbjct: 512 M----GVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYN 557



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 215/473 (45%), Gaps = 11/473 (2%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
            Y + G +  A     KM    +   + TYN++L+ L  T    +   LY ++  S T  +
Sbjct: 563  YCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWD 622

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +YT +I+++GLC+ + + +AI   Q    K    ++++ N ++    K G  E A  LF 
Sbjct: 623  IYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFA 682

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             +   GL  +  +Y +++  L   GS+EE     + M ++G  P++   + L +      
Sbjct: 683  AIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 742

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
             IS A   + KL  +    +  T ++LI     I + +E     + +  +   LN    S
Sbjct: 743  DISRAGAYLSKLDERNFSVEASTTSMLI----SIFSSDEYQHHAKSLPKKYRILNEANSS 798

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             L+    K+ RID+A  L  EM   GL PD+VTY+ ++ GL +  +  +A +LY  M + 
Sbjct: 799  ALIK---KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINS 855

Query: 303  RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            R   N + +  IL GLC+   + EA   F SL       +++ +NIMI   +K G   +A
Sbjct: 856  RTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDA 915

Query: 363  VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            + L+  +    + P +VT+  +     + G + +   L  T++  G    +      +  
Sbjct: 916  MDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRR 975

Query: 423  YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
              + G+I R  A L +++ K       T + +I  L  + + Q   + L + Y
Sbjct: 976  LLQRGDISRAGAYLSKLDEKNFSLEASTTSELIS-LFSRGEYQHHAKSLPEKY 1027



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 195/459 (42%), Gaps = 35/459 (7%)

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCK-SGR------IDEALGLLYEMEA---VGLK 270
           + LKL + +L      +V+A++ LL+++ + SGR       +  + L   M     + + 
Sbjct: 32  DALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVA 91

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P+  TYSILI   C+   +      +  +       +      +L GLC+ + + EA   
Sbjct: 92  PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEA--- 148

Query: 331 FDSLIMS----NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI---SPSIVTFNS 383
            D L+       C+ D V YNI++ G        EA++L   + + ++    P++V++++
Sbjct: 149 MDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYST 208

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           +I GF   G+V     L   +   G+ P  VTYTT ++  C+     R  A+ Q+M    
Sbjct: 209 VINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNG 268

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           + P   TY  +I G     K +E V++LE+M   G  P+  TY +++   CK    R+A 
Sbjct: 269 VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREAR 328

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
              + M    ++P+  TY I++ G    G L     LL  +  + IS     +     A+
Sbjct: 329 FFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAY 388

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQ 608
              G + KAM  F +M ++G       Y                +  F  M++ G  PD 
Sbjct: 389 AKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDI 448

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            +   ++           V EL   M+  G+ P+    N
Sbjct: 449 VVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFN 487



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/355 (20%), Positives = 139/355 (39%), Gaps = 68/355 (19%)

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK-NGKVADARRLLDTIKLHG--------- 408
           +G+A++L+ +L+      S+V FN L+    + +G+ +        + L           
Sbjct: 30  LGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIK 89

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P+  TY+  +  +C  G+++   A    +        H+    ++ GLC   ++ EA+
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 469 Q-LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL-----NQMWLHNLEPTSATYN 522
             LL+ M  +G  PD ++YN +++  C  K   +A +LL     +Q+W  +  P   +Y+
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVW--SCPPNVVSYS 207

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            +I+G    G +     L + + +  I    V YTT+I   C      +A   F QM++ 
Sbjct: 208 TVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDN 267

Query: 583 GFEISIRDYT-------------------------------------------------- 592
           G + +I  Y                                                   
Sbjct: 268 GVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREA 327

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           + FF  M+  G  P      +ML  +   G L  + +L  +M+ +G+ P+  + N
Sbjct: 328 RFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFN 382


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 147/523 (28%), Positives = 258/523 (49%), Gaps = 8/523 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y   G   DA  ++ +++E     S+ ++NS+L  L   R  D    L++ +K    P N
Sbjct: 195 YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP-N 253

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T +I+ID LC   R+++A   L E       P+++++N ++ R CK    E A  +F 
Sbjct: 254 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 313

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
              + G +PD  +Y  LI GL   G ++EA      M   G   + + Y+ L + F +  
Sbjct: 314 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 373

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +     KV ++L+ +G  PD+      +    + G VE+G  + E + S GF  +V +YS
Sbjct: 374 RKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 433

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L+  + K+G+  E   + + M+  G   D   Y+ ++ G CK  KVHKA ++  EM  K
Sbjct: 434 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 493

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P    +GAI+ GL + + + EA M F+         +VVLY+ +IDG+ K+G I EA
Sbjct: 494 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 553

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +  ++++K ++P++ T+NSL+    K  ++ +A     ++K     P+  TY+  +N 
Sbjct: 554 YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILING 613

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C      +     Q+M+ + + P  VTYT +I GL K   + +A  L E     G  PD
Sbjct: 614 LCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPD 673

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
             ++N +I          +A+Q      ++ L  +S ++N L+
Sbjct: 674 AASFNALIEGMSNANRAMEAYQTT----VYQLSSSSCSWNFLV 712



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/629 (24%), Positives = 284/629 (45%), Gaps = 39/629 (6%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSE 58
           LA    R   + DAV  +A M+ L  + +   Y  L+  L   R  +   +L   ++   
Sbjct: 16  LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
               V+  + ++  L ++ ++ DA+  + E  G    P +V  N  +  + K G  ++A 
Sbjct: 76  YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             F  +   GL PD  SY  +I  LC AG + EA E    M      P A  Y+ +  G+
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 195

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               +   A+K++++L  +G  P +V++  ++    +   V+E L L EVM  +  + N 
Sbjct: 196 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNS 254

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y++++  +C  GR++EA  +L EME   L P+L+T +I++  LCK  K+ +A +++  
Sbjct: 255 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 314

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEA-RMY--------------------------- 330
              +  +P+   + +++ GL +K  + EA R++                           
Sbjct: 315 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 374

Query: 331 -------FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
                  F  LI   C  D+ L N  +D   K G + +   ++  +      P + +++ 
Sbjct: 375 KEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSI 434

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI+G  K G+  +   +   +K  G    A  Y   ++ +C+ G + +   +L+EM+ K 
Sbjct: 435 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 494

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           + PT  TY  ++ GL K  +L EA  L E+    G+  + + Y+++I  F K   + +A+
Sbjct: 495 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 554

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            +L +M    L P   T+N L+D L    ++  A     S++E         Y+ +I   
Sbjct: 555 LILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 614

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           C     +KA  F+  M ++G   ++  YT
Sbjct: 615 CRVQKYNKAFVFWQDMQKQGLVPNVVTYT 643



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 145/562 (25%), Positives = 266/562 (47%), Gaps = 41/562 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNV-- 63
           + + G V  A     ++K   LK    +Y S+++ L     + +  +     E  R+V  
Sbjct: 125 FGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPC 184

Query: 64  -YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            Y  + +I G     R +DA   L+    +   PSVVS N+I++   K    + A  LF 
Sbjct: 185 AYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE 244

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +M K    P++ +YNI+I  LC+ G +EEA    ++M    + P+ +T +I+        
Sbjct: 245 VM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR 303

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A+K+ +    +G +PD VTY  LI G  + G V+E  +L E ML  G   N + Y+
Sbjct: 304 KLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT 363

Query: 243 VLLSS-----------------------------------MCKSGRIDEALGLLYEMEAV 267
            L+ +                                   + K+G +++   +  ++ + 
Sbjct: 364 SLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSY 423

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  PD+ +YSILI GL K  +  +   +++ M  +  + ++ A+ A++ G C+   + +A
Sbjct: 424 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 483

Query: 328 RMYFDSLIMSNCIQD-VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
               + +    C+Q  V  Y  ++DG  K+  + EA  L+ +   K I  ++V ++SLI 
Sbjct: 484 YEILEEM-KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLID 542

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           GF K G++ +A  +L+ +   GL P+  T+ + ++A  +   I   L   Q M+     P
Sbjct: 543 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPP 602

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              TY+++I GLC+  K  +A    +DM   G+ P+ +TY T+I    K  ++  A+ L 
Sbjct: 603 NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLF 662

Query: 507 NQMWLHNLEPTSATYNILIDGL 528
            +   +   P +A++N LI+G+
Sbjct: 663 ERFKANGGIPDAASFNALIEGM 684



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 176/367 (47%), Gaps = 4/367 (1%)

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G+ L   A + L +++ ++ R+D+A+  +  M  +  +P    Y++LI  L +  +  +A
Sbjct: 5   GYGLPNQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERA 64

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           ++L  +M              ++  L  +  + +A    D +  S    D+VLYN+ ID 
Sbjct: 65  LELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDC 124

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           + K GN+  A + + +L  + + P  V++ S+I+  CK G++ +A  L   ++     P 
Sbjct: 125 FGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPC 184

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
           A  Y T +  Y   G  +    LL+ +  +   P+ V++  ++  L K+ K+ EA+ L E
Sbjct: 185 AYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE 244

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            M      P+  TYN II   C    + +A+++L++M   +L P   T NI++D LC   
Sbjct: 245 VMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR 303

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            L+ A  +  S  +   +   V Y ++I     +G V +A   F +M++ G   +   YT
Sbjct: 304 KLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT 363

Query: 593 ---KSFF 596
              ++FF
Sbjct: 364 SLIRNFF 370


>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13800-like [Brachypodium distachyon]
          Length = 821

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 156/581 (26%), Positives = 279/581 (48%), Gaps = 20/581 (3%)

Query: 30  SIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           S++     L+  +  D  + ++ ++       +V+ +S  I GLC+  ++  A   LQE 
Sbjct: 227 SLRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQEI 286

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             ++     ++ N +M   CK    E  + L    ++ GL PD + Y+ LI   C  G++
Sbjct: 287 IREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNL 346

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
            + L+    M  HG+E +    S L + F  L   S   +  QK    G   D V Y + 
Sbjct: 347 LKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIA 406

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           +  YC++GN++E +KL   M++ G   + I Y+ L+   C  G I  A     EM    +
Sbjct: 407 MDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANV 466

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           KPD+VTY+IL  GL K+  V +   L   M  + + PNS  +G ++ G C  + ++EA +
Sbjct: 467 KPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEV 526

Query: 330 YFDSLIMSNCIQDV-VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
            F+ ++    I ++ VLY+ M+ GY+  G    A  L+ ++ ++       + + LI   
Sbjct: 527 LFN-IVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDL 585

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C++G    A  +  T+      P  ++Y+  ++AYC+ G+++       +M  + +    
Sbjct: 586 CRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDV 645

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ---- 504
           + YTV++ G CK   +QEA +L   M  +G+ PD I Y  ++    K +DL++ +Q    
Sbjct: 646 IVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLLDGHLK-EDLQRRWQGISR 704

Query: 505 -------------LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
                        LL+ M    +EP    Y +LIDG C +  L+ A  L   + +  ++ 
Sbjct: 705 DKRSLLLRAKQNRLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTP 764

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
              AYT +I  +C++G+V KA   F +MV+KG +  +  ++
Sbjct: 765 DHYAYTALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFS 805



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/566 (25%), Positives = 255/566 (45%), Gaps = 38/566 (6%)

Query: 95  GPSVVSLNAIMSRYCKLGF------------------AEVAKGLFCLMLKYGLHPDAFSY 136
           GP +V L   + R C   +                  A    GLF  + + G+ P  ++ 
Sbjct: 134 GPEIVPLMDQLKRTCTTSYPLLFATNCLITACTTCCDARDTIGLFGELCRLGVVPPVWTC 193

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           NIL+     +   E  L   ++M    +  DA +  I+ +      +   A+KV  +++ 
Sbjct: 194 NILLKFAAESCDSEIVLSAYDEMKFFRLTLDAHSLRIITRSLFQEKKADKAFKVWVEMIE 253

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
            G  PD+  ++  I G C+ G ++    + + ++ +  ++  IA++V++  +CK  R++E
Sbjct: 254 MGVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEE 313

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
              LL      GL PD+  YS LIR  CK   + K +  Y  M S  +  N      +L 
Sbjct: 314 VEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQ 373

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
              +  M ++   YF     S    D VLYNI +D Y KLGN+ EAV+L  +++   +SP
Sbjct: 374 CFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSP 433

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
             + +  LI G+C  G + +AR+  + +    ++P  VTY    +   + G +  +  L+
Sbjct: 434 DRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLI 493

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
             ME + + P  +TY VVI G C+   L EA  L   +   G+   ++ Y++++  +   
Sbjct: 494 GHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHK 553

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
                A+ L  ++          + + LI  LC +G+ + A  +  ++ E N     ++Y
Sbjct: 554 GWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISY 613

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
           + +I A+C  GD+  A  +F  MV++G  + +  YT      +L NG+      C++   
Sbjct: 614 SKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYT------VLMNGY------CKI--- 658

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPD 642
                G +    EL A M   G+ PD
Sbjct: 659 -----GLMQEACELFAQMTSLGIKPD 679



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 193/406 (47%), Gaps = 16/406 (3%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           N  M  YCKLG  + A  L   M+  GL PD   Y  LI G C+ G ++ A +   +M +
Sbjct: 404 NIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLK 463

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
             V+PD +TY+ILA G      +   + +I  +  +G  P+ +TY V+I G+C+  N+ E
Sbjct: 464 ANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSE 523

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
              L  ++  +G     + YS ++      G  D A  L   +   G   D  + S LI 
Sbjct: 524 AEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLIS 583

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
            LC+      A  + + M  K   P+  ++  ++   C+   +  AR++F  ++      
Sbjct: 584 DLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPV 643

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK-------NGKV 394
           DV++Y ++++GY K+G + EA +L+ Q+    I P I+ +  L+ G  K        G  
Sbjct: 644 DVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLLDGHLKEDLQRRWQGIS 703

Query: 395 ADAR---------RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            D R         RLL ++K   +EP    YT  ++  C+   +++   L  EM  K + 
Sbjct: 704 RDKRSLLLRAKQNRLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLT 763

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
           P H  YT +I G C Q ++ +A  L ++M   G+ PD +T++ + R
Sbjct: 764 PDHYAYTALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFSVLNR 809



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/466 (21%), Positives = 174/466 (37%), Gaps = 91/466 (19%)

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +V+ +  C   R   A     + E+VG + D  TY+ ++  L    +      L+ E+  
Sbjct: 69  NVVKTLQCLKRRPAIAFAYFKDAESVGFRHDFSTYAEIVHILSHSGQGRMLFSLFCEI-- 126

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +SP S   G  ++ L ++   T    Y   L  +NC+  +       D    +G  GE
Sbjct: 127 --VSPTS-GGGPEIVPLMDQLKRTCTTSY-PLLFATNCL--ITACTTCCDARDTIGLFGE 180

Query: 362 AVQL----------------------------YRQLIEKRISPSIVTFNSLIYGFCKNGK 393
             +L                            Y ++   R++    +   +     +  K
Sbjct: 181 LCRLGVVPPVWTCNILLKFAAESCDSEIVLSAYDEMKFFRLTLDAHSLRIITRSLFQEKK 240

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
              A ++   +   G++P    +++F+   CE G I    A+LQE+  + +    + + V
Sbjct: 241 ADKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNV 300

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           V+ GLCK+ +L+E  +LLE+    G+TPD   Y+ +IRS+CK  +L K       M  H 
Sbjct: 301 VMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHG 360

Query: 514 LEPT-----------------------------------SATYNILIDGLCVNGDLKNAD 538
           LE                                        YNI +D  C  G++  A 
Sbjct: 361 LEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAV 420

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            LL  +    +S  ++ YT +IK +C +GD+  A                    +  F  
Sbjct: 421 KLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNA--------------------RQAFEE 460

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           ML     PD     ++     + G +  VF+L   M   GL P+  
Sbjct: 461 MLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSL 506



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 105/240 (43%), Gaps = 20/240 (8%)

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G++P    +++F+   CE G I    A+LQE+  + +    + + VV+ GLCK+ +L+E 
Sbjct: 255 GVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEV 314

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            +LLE+    G+TPD   Y+ +IRS+CK  +L K       M  H LE      + L+  
Sbjct: 315 EKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQC 374

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
               G            ++  + +  V Y   + A+C  G++ +A+    +M        
Sbjct: 375 FTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEM-------- 426

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                       ++ G  PD+     ++  +   GD+ +  +    M+K+ + PD    N
Sbjct: 427 ------------MTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYN 474


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 149/545 (27%), Positives = 257/545 (47%), Gaps = 8/545 (1%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
            P+  + NA++   C+      A+    LM++ G  PDAF++N LI G C    +E A +
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHD 185

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
               M   G   DA++Y+ L +GF    +I  A ++ +++    + PD+ T+  L+ G C
Sbjct: 186 LFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHAALVKGLC 241

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
             G  EEGL + + M   G++    AY+ L+   C+  + +EA  +L EM   GL P +V
Sbjct: 242 DAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           T +I++   C++ ++  A++++  M  K   PN + + AI+ G C    + +A    D +
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                  DVV YN++I G    G+IG A +L R +    ++    T+N LI   CK GKV
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +A  L D ++  G+ P++VT+ T +N  C+ G        L+ M +    P   TY+  
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPF 481

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I+ LCK    QE +  +++M    V P  + Y  +I      ++   A ++  QM     
Sbjct: 482 IENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGC 541

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P   TY   +   C  G L  A+ ++  +++    +  +AY T+I  H + G   +A+T
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVT 601

Query: 575 FFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
               M   G       +T  FF ++         E   +   +  +  +L  VFEL  +M
Sbjct: 602 ILKHMT--GVASMPNHFT--FFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELM 657

Query: 635 IKSGL 639
            K+ +
Sbjct: 658 KKNSV 662



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 223/463 (48%), Gaps = 4/463 (0%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I  LC+++ L+ A  +L       + P   + N+++  YC+    EVA  LFC M
Sbjct: 131 TYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKM 190

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G   DA SY  LI G C AG ++EALE   +M     +PD  T++ L KG     + 
Sbjct: 191 PFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHAALVKGLCDAGRG 246

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
                ++QK+   G  P    Y  L+  +C+    EE  K+   M   G    V+  +++
Sbjct: 247 EEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIV 306

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +++ C+ GR+  A+ +   M   G +P++ TY+ +++G C   KV+KA+ L ++M    +
Sbjct: 307 VNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGV 366

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+   +  ++ G C    I  A      +  +    D   YN++ID   K G + EA  
Sbjct: 367 EPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACS 426

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+  L  + I P+ VTFN++I G CK GK   A   L+ +   G  P   TY+ F+   C
Sbjct: 427 LFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLC 486

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +    Q  L  + EM  K + P+ V YT+VI  L  +     A ++   M   G +PD +
Sbjct: 487 KTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVV 546

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           TY T +R++C    L +A  ++ +M        +  YN LIDG
Sbjct: 547 TYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDG 589



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/534 (25%), Positives = 248/534 (46%), Gaps = 16/534 (2%)

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           T  ++YT++ ++ GLC   R ++ +  LQ+     + P+  +  A++  +C+   AE A+
Sbjct: 226 TQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAE 285

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +   M   GL P   +  I+++  C  G M  A+     M   G EP+  TY+ + +GF
Sbjct: 286 KILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGF 345

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               ++  A  ++ ++   G +PD+VTY +LI G C  G++    +L  +M   G   + 
Sbjct: 346 CNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQ 405

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+VL+ ++CK+G++DEA  L   +E  G++P+ VT++ +I GLCK  K   A      
Sbjct: 406 YTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLEN 465

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M S   +P+++ +   +  LC+ +   E   + D ++  +     V Y I+I+      N
Sbjct: 466 MISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERN 525

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
            G A +++ Q++ +  SP +VT+ + +  +C  G++ +A  ++  +K       A+ Y T
Sbjct: 526 YGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNT 585

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV-------------VIKGLCKQWK-- 463
            ++ +   G   R + +L+ M   A  P H T+ +             V       WK  
Sbjct: 586 LIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTI 645

Query: 464 -LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            L +  +L E M    V     TY +I+  F + + L +   L++ M   NL      YN
Sbjct: 646 ELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYN 705

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            L++  C      +A  LL S+  H      + Y  ++    AEG   +A   F
Sbjct: 706 ALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIF 759



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 140/571 (24%), Positives = 252/571 (44%), Gaps = 23/571 (4%)

Query: 33  TYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           T+NSL+     T   ++  DL+  +      ++  + + +I+G C+  R+ +A+   +E 
Sbjct: 166 TFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM 225

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                 P + +  A++   C  G  E    +   M + G  P   +Y  L+   C     
Sbjct: 226 TQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKA 281

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           EEA +  N+M   G+ P  +T +I+   +    ++SGA +V + +  KG +P++ TY  +
Sbjct: 282 EEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAI 341

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + G+C  G V + + L + M   G + +V+ Y++L+   C  G I  A  LL  ME  GL
Sbjct: 342 VQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGL 401

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
             D  TY++LI  LCK  KV +A  L++ +  + I PNS     ++ GLC+      A  
Sbjct: 402 AADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACT 461

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
           + +++I +    D   Y+  I+   K     E +    ++++K + PS V +  +I    
Sbjct: 462 FLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLF 521

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
                  A R+   +   G  P  VTYTT + AYC EG +     ++ EM+        +
Sbjct: 522 NERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAM 581

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR----------------SF 493
            Y  +I G     +   AV +L+ M  +   P+  T+  ++R                S 
Sbjct: 582 AYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSV 641

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
            K  +L   F+L   M  +++  ++ TY  +++G      L     L+  ++E N+ L +
Sbjct: 642 WKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNE 701

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             Y  ++   C       A    C M+  GF
Sbjct: 702 DIYNALVNCFCKLRMYSDAWALLCSMIGHGF 732



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/533 (21%), Positives = 216/533 (40%), Gaps = 57/533 (10%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           +++ ++      NV+T + ++ G C   ++  A+  L +       P VV+ N ++   C
Sbjct: 322 VFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQC 381

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
             G    A  L  LM   GL  D ++YN+LI  LC  G ++EA    + +   G+ P+++
Sbjct: 382 IDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSV 441

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           T++ +  G     +   A   ++ ++  G  PD  TY+  I   C+    +EGL   + M
Sbjct: 442 TFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEM 501

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           L +  K + + Y+++++ +        A  +  +M + G  PD+VTY+  +R  C + ++
Sbjct: 502 LQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRL 561

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A  +  EM   R                                    I D + YN +
Sbjct: 562 DEAENVVTEMKKCRT-----------------------------------IVDAMAYNTL 586

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           IDG+  +G    AV + + +      P+  TF  ++       ++A+   L  T     +
Sbjct: 587 IDGHTSIGQTDRAVTILKHMTGVASMPNHFTF-FILLRHLLQRRLAEHVPLKATSVWKTI 645

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           E                  +  +  L + M+  ++  +  TY  +++G  ++ +L E   
Sbjct: 646 E------------------LADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTS 687

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           L+  M    +  ++  YN ++  FCK +    A+ LL  M  H   P    Y  L+ GL 
Sbjct: 688 LVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLT 747

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV---HKAMTFFCQM 579
             G    A  +  S +    +  ++ +  II     +G     H  ++   QM
Sbjct: 748 AEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQM 800



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 113/495 (22%), Positives = 209/495 (42%), Gaps = 28/495 (5%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPR 61
            Y R G +  AV V   M+    + ++ TYN+++    +   ++    L D ++      
Sbjct: 309 AYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEP 368

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T +++I G C    +  A   L+   G        + N ++   CK G  + A  LF
Sbjct: 369 DVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLF 428

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +   G+ P++ ++N +I+GLC AG  + A  F  +M   G  PD  TYS   +    L
Sbjct: 429 DGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIEN---L 485

Query: 182 SQISGAWK---VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
            +  G+ +    I ++L K   P  V YT++I       N     ++   M+SQG   +V
Sbjct: 486 CKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDV 545

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y+  + + C  GR+DEA  ++ EM+      D + Y+ LI G     +  +A+ +   
Sbjct: 546 VTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKH 605

Query: 299 MCSKRISPNSF--------------AHGAILLGLCEKEMITEARMY--FDSLIMSNCIQD 342
           M      PN F              A    L      + I  A ++  F+ +  ++    
Sbjct: 606 MTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSS 665

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
              Y  +++G+ +   + E   L   + E+ +  +   +N+L+  FCK    +DA  LL 
Sbjct: 666 ARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLC 725

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
           ++  HG  P+ + Y   ++    EG   R   + +    K      + + V+I G  ++ 
Sbjct: 726 SMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKG 785

Query: 463 KL---QEAVQLLEDM 474
                 + + +LE M
Sbjct: 786 HADMCHDMISMLEQM 800



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 105/475 (22%), Positives = 214/475 (45%), Gaps = 25/475 (5%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           +   G V+ A+ ++ +M+E  ++  + TYN L+       H    + L   ++ +    +
Sbjct: 345 FCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAAD 404

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            YT +++ID LC+  ++ +A         +   P+ V+ N +++  CK G  +VA     
Sbjct: 405 QYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLE 464

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+  G  PD ++Y+  I  LC     +E L F ++M +  V+P  + Y+I+        
Sbjct: 465 NMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNER 524

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               A ++  +++ +G  PD+VTYT  +  YC  G ++E   +   M      ++ +AY+
Sbjct: 525 NYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYN 584

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC----------KQDKVHKA 292
            L+      G+ D A+ +L  M  V   P+  T+ IL+R L           K   V K 
Sbjct: 585 TLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKT 644

Query: 293 IQLYN-----EMCSKRISPNSF-AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
           I+L +     E+  K   P+S   + +IL G  E+  + E       +   N   +  +Y
Sbjct: 645 IELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIY 704

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N +++ + KL    +A  L   +I     P+++ +  L+ G    G+   A+ +  + + 
Sbjct: 705 NALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRW 764

Query: 407 HGLEPSAVTYTTFMNAYCEEGNI---QRLLALLQEMETKAIGPTHVTYTVVIKGL 458
                  + +   ++ +  +G+      ++++L++M+ K   P+  TY ++ + L
Sbjct: 765 KEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCK---PSDETYAMLTEEL 816



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 123/288 (42%), Gaps = 19/288 (6%)

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
           +P+  T+N+LI   C+   +  A+R L  +   G  P A T+ + +  YC    ++    
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHD 185

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L  +M  +      V+Y  +I+G C+  ++ EA++L  +M      PD  T+  +++  C
Sbjct: 186 LFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHAALVKGLC 241

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
                 +   +L +M      PT+  Y  L+D  C     + A+ +L  + +  +    V
Sbjct: 242 DAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MM 599
             T ++ A+C EG +  A+  F  M  KG E ++  Y      FC              M
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              G  PD     +++      G +GS F L  +M  +GL  D++  N
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYN 409


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 137/446 (30%), Positives = 224/446 (50%), Gaps = 14/446 (3%)

Query: 80  QDAILFLQETAGKEFGPSVVS--------------LNAIMSRYCKLGFAEVAKGLFCLML 125
           Q  I FL    GK+   SV +               +A+M  Y   GF   A   F L+ 
Sbjct: 121 QSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR 180

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
                        L+  +  + S      F +++  +G  P    Y+IL   F     I 
Sbjct: 181 NSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIR 240

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  +  ++  +G  P  V++  LI G C+  N++EG +L++ M       +V  YSVL+
Sbjct: 241 DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLI 300

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +CK GR+D A  L  EM+  GL+P+ +T++ LI G C+  ++  A+  Y++M +  + 
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVK 360

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+   +  +L GLC+   + +AR   D + M     D + Y  +IDGY K G++  A+++
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
            + + E+ +    V F +LI GFC++G+V DA R L  +   G++P   TYT  ++ YC+
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +GN++    LL+EM+     P  +TY V++ GLCKQ +++ A  LLE M  +GVTPD IT
Sbjct: 481 KGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDIT 540

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWL 511
           YN ++   CK        +L N+  L
Sbjct: 541 YNILLEGHCKNGKAEDLLKLRNEKGL 566



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 200/364 (54%), Gaps = 3/364 (0%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           +L  GF   V  Y++L++  CK G I +A  +  E+   GL+P  V+++ LI GLCK   
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + +  +L   M   RI P+ F +  ++ GLC++  +  A   FD +       + + +  
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDG  +   I  A+  Y Q++   + P +V +N+L+ G CK G V  AR+L+D +++ G
Sbjct: 334 LIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG 393

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           ++P  +TYTT ++ YC+EG+++  + + + M  + +   +V +T +I G C+  ++++A 
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           + L +M   G+ PD  TY  +I  +CK  +++  F+LL +M ++  +P   TYN+L++GL
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C  G +KNA+ LL ++    ++   + Y  +++ HC  G   KA        EKG  +  
Sbjct: 514 CKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDY 570

Query: 589 RDYT 592
             YT
Sbjct: 571 AYYT 574



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 196/376 (52%), Gaps = 3/376 (0%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W    ++L  G  P +  Y +LI  +C+ G++ +   +   +  +G +   ++++ L++ 
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CKS  +DE   L   ME   + PD+ TYS+LI GLCK+ ++  A QL++EM  + + PN
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
                A++ G C    I  A   +  ++      D+V+YN +++G  K+G++ +A +L  
Sbjct: 328 GITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++    + P  +T+ +LI G+CK G +  A  +   +   G+    V +T  ++ +C +G
Sbjct: 388 EMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            ++     L+EM    + P   TYT+VI G CK+  ++   +LL++M + G  P  ITYN
Sbjct: 448 RVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYN 507

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++   CK   ++ A  LL  M    + P   TYNIL++G C NG    A+ LL    E 
Sbjct: 508 VLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEK 564

Query: 548 NISLTKVAYTTIIKAH 563
            + +    YT+++  +
Sbjct: 565 GLIVDYAYYTSLVSEY 580



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 205/425 (48%), Gaps = 6/425 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSE 58
           L   Y  +G V DA+     ++  + ++       LL  + +++    +W  Y +I    
Sbjct: 159 LMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYG 218

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
            P  V   +I+I+  C++  ++DA L   E   +   P+ VS N +++  CK    +   
Sbjct: 219 FPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGF 278

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M +  ++PD F+Y++LIHGLC  G ++ A +  ++M + G+ P+ IT++ L  G 
Sbjct: 279 RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQ 338

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               +I  A     ++L  G  PD+V Y  L+ G C++G+V +  KL + M   G K + 
Sbjct: 339 CRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDK 398

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           I Y+ L+   CK G ++ A+ +   M   G+  D V ++ LI G C+  +V  A +   E
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M    + P+   +  ++ G C+K  +         + ++     V+ YN++++G  K G 
Sbjct: 459 MVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ 518

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +  A  L   ++   ++P  +T+N L+ G CKNGK  D   LL      GL      YT+
Sbjct: 519 MKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAED---LLKLRNEKGLIVDYAYYTS 575

Query: 419 FMNAY 423
            ++ Y
Sbjct: 576 LVSEY 580



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 180/378 (47%)

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           +  L+  Y   G V + ++   ++ +  F++       LL  M  S           E+ 
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G  P +  Y+ILI   CK+  +  A  ++NE+  + + P + +   ++ GLC+   + 
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           E      ++  +    DV  Y+++I G  K G +  A QL+ ++ ++ + P+ +TF +LI
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G C++ ++  A      +   G++P  V Y T +N  C+ G++ +   L+ EM    + 
Sbjct: 336 DGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMK 395

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  +TYT +I G CK+  L+ A+++ + M   GV  D + +  +I  FC+   +R A + 
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           L +M    ++P  ATY ++IDG C  G++K    LL  +Q +      + Y  ++   C 
Sbjct: 456 LREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCK 515

Query: 566 EGDVHKAMTFFCQMVEKG 583
           +G +  A      M+  G
Sbjct: 516 QGQMKNANMLLEAMLNLG 533


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 162/646 (25%), Positives = 308/646 (47%), Gaps = 54/646 (8%)

Query: 26  DLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDA 82
           DL+ ++ T+ +L+      R  D  + LY+ + +S    +V T S ++ GLC+  +L +A
Sbjct: 231 DLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEA 290

Query: 83  ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
            + L+E       P+ VS   I+S   K G    A      M+  G+  D      ++ G
Sbjct: 291 AMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDG 350

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           L  AG  +EA E    + +  + P+ +TY+ L  G   +  +  A  V+QK+  +   P+
Sbjct: 351 LFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPN 410

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           +VT++ +I GY + G + + +++   M+      NV  Y++LL    ++G+ + A G   
Sbjct: 411 VVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYK 470

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           EM++ GL+ + + + IL+  L +   + +A  L  ++ SK I  + F + +++ G  ++ 
Sbjct: 471 EMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEG 530

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
             + A      +   +   DVV YN +  G ++LG   E   ++ ++IE  ++P  VT+N
Sbjct: 531 NESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCVTYN 589

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           S++  +   GK  +A  LL+ +K +G+ P+ VTY   +   C+ G I++++++L EM   
Sbjct: 590 SVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAV 649

Query: 443 AIGPT-----------------------------------HVTYTVVIKGLCKQWKLQEA 467
              PT                                    + Y  +I  LC+    ++A
Sbjct: 650 GYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKA 709

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
             +L +M + G++ D +TYN +IR +C    + KAF   +QM +  + P   TYN L++G
Sbjct: 710 NVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEG 769

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF--- 584
           L  NG +++AD L+  ++E  +      Y  ++  H   G+   ++  +C+M+ KGF   
Sbjct: 770 LSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPT 829

Query: 585 ----EISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAF 618
                + I+DY K+            ML+ G  P+    +V++  +
Sbjct: 830 TGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGW 875



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 222/468 (47%), Gaps = 34/468 (7%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T S +I+G  ++  L  A+  L++       P+V     ++  Y + G  E A G +
Sbjct: 410 NVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFY 469

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M  +GL  +   ++IL++ L  +G M+EA     D+   G+  D   YS L  G+   
Sbjct: 470 KEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKE 529

Query: 182 SQISGAWKVIQKLLIK----------------------------------GSDPDIVTYT 207
              S A  V+Q++  K                                  G  PD VTY 
Sbjct: 530 GNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPDCVTYN 589

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            ++  Y   G  E  L L   M S G   N++ Y++L+  +CK+G I++ + +L+EM AV
Sbjct: 590 SVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAV 649

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  P  + +  L++   +  K    +Q++ ++    ++ N   +  ++  LC   M  +A
Sbjct: 650 GYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKA 709

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
            +    +++     D+V YN +I GY    ++ +A   Y Q++   ISP+I T+N+L+ G
Sbjct: 710 NVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEG 769

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
              NG + DA +L+  ++  GL P+A TY   ++ +   GN +  + L  EM TK   PT
Sbjct: 770 LSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPT 829

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
             TY V+I+   K  K+++A +LL +M   G  P+  TY+ +I  +CK
Sbjct: 830 TGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCK 877



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 154/670 (22%), Positives = 311/670 (46%), Gaps = 53/670 (7%)

Query: 22  MKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSR 78
           M+ L L  S+  +N LLY    +  +     LY ++ +     NV++ ++++  LC+   
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L  A+ +L+ +         V+ N ++  +CK G A+   GL   M+K G+  D+ + NI
Sbjct: 61  LGLALGYLRNSVFDH-----VTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNI 115

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           L+ G C  G ++ A     ++   GV  DAI  + L  G+  +  +S A  +++     G
Sbjct: 116 LVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG 175

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN--------------------- 237
             PDIVTY  L+  +C+ G++ +   +   +L  GF+ +                     
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKAESVVNEIL--GFRRDDESGVLNDCGVETWDGLRDLQ 233

Query: 238 --VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
             V+ ++ L+++ CK   ID+   L  +M   G+ PD+VT S ++ GLC+  K+ +A  L
Sbjct: 234 PTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAML 293

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
             EM +  + PN  ++  I+  L +   + EA  +   +++     D+VL   M+DG  K
Sbjct: 294 LREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFK 353

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G   EA ++++ +++  + P+ VT+ +L+ G CK G V  A  +L  ++   + P+ VT
Sbjct: 354 AGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVT 413

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           +++ +N Y ++G + + + +L++M    I P    Y +++ G  +  + + A    ++M 
Sbjct: 414 FSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMK 473

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G+  + I ++ ++ +  +   +++A  L+  +    +      Y+ L+DG    G+  
Sbjct: 474 SWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNES 533

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE---ISIRDYT 592
            A  ++  + E ++    VAY  + K     G  ++  + F +M+E G     ++     
Sbjct: 534 AALSVVQEMTEKDMQFDVVAYNALTKGLLRLGK-YEPKSVFSRMIELGLTPDCVTYNSVM 592

Query: 593 KSFFCM------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
            ++F              M S G  P+     +++    + G +  V  +   M+  G +
Sbjct: 593 NTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYV 652

Query: 641 PD----KFLI 646
           P     KFL+
Sbjct: 653 PTPIIHKFLL 662



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/619 (22%), Positives = 284/619 (45%), Gaps = 37/619 (5%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + V+ G C++         L E   K      V+ N ++  YC++G  + A+ +   +
Sbjct: 77  TYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNL 136

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G+  DA   N L+ G C  G +  AL+   D  ++GV+PD +TY+ L   F     +
Sbjct: 137 VGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDL 196

Query: 185 SGAWKVIQKLL---------------------IKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           + A  V+ ++L                     ++   P +VT+T LI  YC+   +++  
Sbjct: 197 AKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFF 256

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
            L E M+  G   +V+  S +L  +C+ G++ EA  LL EM  +GL P+ V+Y+ +I  L
Sbjct: 257 SLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISAL 316

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
            K  +V +A    ++M  + IS +      ++ GL +     EA   F +++  N + + 
Sbjct: 317 LKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNC 376

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V Y  ++DG+ K+G++  A  + +++ ++ + P++VTF+S+I G+ K G +  A  +L  
Sbjct: 377 VTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRK 436

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +    + P+   Y   ++ Y   G  +      +EM++  +   ++ + +++  L +   
Sbjct: 437 MVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGG 496

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           ++EA  L++D+   G+  D   Y++++  + K  +   A  ++ +M   +++     YN 
Sbjct: 497 MKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNA 556

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L  GL   G  +    +   + E  ++   V Y +++  +  +G    A+    +M   G
Sbjct: 557 LTKGLLRLGKYE-PKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYG 615

Query: 584 FEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
              ++  Y                 S    ML+ G+ P   I + +L A+ +     ++ 
Sbjct: 616 VMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAIL 675

Query: 629 ELAAVMIKSGLLPDKFLIN 647
           ++   ++  GL  ++ + N
Sbjct: 676 QIHKKLVDMGLNLNQMVYN 694



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/622 (23%), Positives = 272/622 (43%), Gaps = 75/622 (12%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+   N ++  +   GF    K L+  M+  G+ P+ FS N+L+H LC  G +  AL +
Sbjct: 8   PSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGY 67

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
                R+ V  D +TY+ +  GF         + ++ +++ KG   D VT  +L+ GYCQ
Sbjct: 68  L----RNSV-FDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQ 122

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           IG V+    +   ++  G  L+ I  + L+   C+ G +  AL L+ +    G+KPD+VT
Sbjct: 123 IGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVT 182

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKR---------------------ISPNSFAHGAI 314
           Y+ L+   CK+  + KA  + NE+   R                     + P       +
Sbjct: 183 YNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTL 242

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           +   C+   I +    ++ +IMS  + DVV  + ++ G  + G + EA  L R++    +
Sbjct: 243 IAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGL 302

Query: 375 SPSIVTFNSLIYGFCKNGKV-----------------------------------ADARR 399
            P+ V++ ++I    K+G+V                                    +A  
Sbjct: 303 DPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEE 362

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           +  TI    L P+ VTYT  ++ +C+ G+++    +LQ+ME + + P  VT++ +I G  
Sbjct: 363 MFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYA 422

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K+  L +AV++L  M  + + P+   Y  ++  + +      A     +M    LE  + 
Sbjct: 423 KKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNI 482

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            ++IL++ L  +G +K A  L+  +    I L    Y++++  +  EG+   A++   +M
Sbjct: 483 IFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEM 542

Query: 580 VEKGFEISIRDYT--------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
            EK  +  +  Y               KS F  M+  G  PD      ++  +   G   
Sbjct: 543 TEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTE 602

Query: 626 SVFELAAVMIKSGLLPDKFLIN 647
           +  +L   M   G++P+    N
Sbjct: 603 NALDLLNEMKSYGVMPNMVTYN 624



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/556 (23%), Positives = 254/556 (45%), Gaps = 12/556 (2%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K++  P N  T + ++DG C+   ++ A   LQ+   +   P+VV+ ++I++ Y K G 
Sbjct: 368 LKLNLVP-NCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGM 426

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A  +   M++  + P+ F Y IL+ G    G  E A  F  +M   G+E + I + I
Sbjct: 427 LNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDI 486

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L         +  A  +I+ +L KG   D+  Y+ L+ GY + GN    L + + M  + 
Sbjct: 487 LLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKD 546

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            + +V+AY+ L   + + G+  E   +   M  +GL PD VTY+ ++     Q K   A+
Sbjct: 547 MQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENAL 605

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            L NEM S  + PN   +  ++ GLC+   I +       ++    +   +++  ++  Y
Sbjct: 606 DLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAY 665

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            +       +Q++++L++  ++ + + +N+LI   C+ G    A  +L  + + G+    
Sbjct: 666 SRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADI 725

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTY   +  YC   ++++      +M    I P   TY  +++GL     +++A +L+ +
Sbjct: 726 VTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSE 785

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G+ P+  TYN ++    +  + R + +L  +M      PT+ TYN+LI      G 
Sbjct: 786 MRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGK 845

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ-MVEKGFEISIRDYT 592
           ++ A  LL  +           Y  +I   C            CQ  +++  ++S ++  
Sbjct: 846 MRQARELLNEMLTRGRIPNSSTYDVLICGWCK---------LSCQPEMDRLLKLSYQNEA 896

Query: 593 KSFFCMMLSNGFPPDQ 608
           K     M   G  P +
Sbjct: 897 KKLLREMCEKGHVPSE 912



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 141/551 (25%), Positives = 251/551 (45%), Gaps = 58/551 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           Y++ GM++ AV V+ KM ++++  ++  Y  LL   +     +     Y ++K      N
Sbjct: 421 YAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEEN 480

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
                I+++ L +   +++A   +++   K     V + +++M  Y K G    A  +  
Sbjct: 481 NIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQ 540

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M +  +  D  +YN L  GL   G  E    F+  M   G+ PD +TY+ +   + +  
Sbjct: 541 EMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSR-MIELGLTPDCVTYNSVMNTYFIQG 599

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF-------- 234
           +   A  ++ ++   G  P++VTY +LI G C+ G +E+ + +   ML+ G+        
Sbjct: 600 KTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHK 659

Query: 235 ---------------------------KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
                                       LN + Y+ L++ +C+ G   +A  +L EM   
Sbjct: 660 FLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIK 719

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G+  D+VTY+ LIRG C    V KA   Y++M    ISPN   + A+L GL    ++ +A
Sbjct: 720 GISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDA 779

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                 +     + +   YNI++ G+ ++GN  ++++LY ++I K   P+  T+N LI  
Sbjct: 780 DKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQD 839

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE---EGNIQRLL---------AL 435
           + K GK+  AR LL+ +   G  P++ TY   +  +C+   +  + RLL          L
Sbjct: 840 YAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKL 899

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV---TPDQITYNTIIRS 492
           L+EM  K   P+  T   +        K  +A +LL+   VIG+   T ++ T    I  
Sbjct: 900 LREMCEKGHVPSESTLMYISSNFSAPGKRDDAKRLLKT--VIGLYRSTAEEATEK--IAQ 955

Query: 493 FCKCKDLRKAF 503
           FC  + LR  F
Sbjct: 956 FCFAQILRFMF 966



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 3/184 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSE 58
           L  V  R GM   A  V+ +M    +   I TYN+L+       H +  ++ Y  + VS 
Sbjct: 696 LITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSG 755

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              N+ T + +++GL     ++DA   + E   +   P+  + N ++S + ++G    + 
Sbjct: 756 ISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSI 815

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L+C M+  G  P   +YN+LI     AG M +A E  N+M   G  P++ TY +L  G+
Sbjct: 816 KLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGW 875

Query: 179 HLLS 182
             LS
Sbjct: 876 CKLS 879


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 263/553 (47%), Gaps = 26/553 (4%)

Query: 110 KLGFAEVAKGLFCLMLKYGLH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           K    + A+ +  LM + G+   P+AFSY ++ +    AG +  AL     M + GVEPD
Sbjct: 209 KTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSR--AGMLRNALRILTLMQKAGVEPD 266

Query: 168 ----AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
                    +L KG    +++  A + ++++ + G +PDIV+Y  LI GYC +  +++ L
Sbjct: 267 LSICNTAIYVLVKG----NKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDAL 322

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRG 282
           +L   M  +G   + ++Y  +++ +CK  +++E   L+  M +   L PD VTY+ LI  
Sbjct: 323 ELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYA 382

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           L K      A+    E   K    +   + A++   C+ + I +A+     +    C  D
Sbjct: 383 LSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPD 442

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           VV Y  +IDG+ ++G I EA ++ +Q+ +    P+ VT+  L+ G C NGK  +AR +++
Sbjct: 443 VVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMIN 502

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
             + H   P+A+TY+  M+    EG +     L +EM  K   P  V   ++I+ LC+  
Sbjct: 503 VSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQ 562

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            +  A + LE+    G   + + + ++I  FC+  DL  A  +L  M+L N  P + TY 
Sbjct: 563 NVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYT 622

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM--------- 573
            L D L     L  A  L+V +    I  T V Y  +I   C  G V   M         
Sbjct: 623 TLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR 682

Query: 574 ----TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
               T + Q++EK      R+  +     +L      D + C +++ ++   G+  S ++
Sbjct: 683 QPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYK 742

Query: 630 LAAVMIKSGLLPD 642
           +A  M +  L+PD
Sbjct: 743 VACQMFRRNLIPD 755



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 264/548 (48%), Gaps = 6/548 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           YSR GM+ +A+ ++  M++  ++  +   N+ +Y L      +      + +KV+    +
Sbjct: 242 YSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPD 301

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + + + +I G C   R+ DA+  + E   K   P  VS   +M+  CK    E  K L  
Sbjct: 302 IVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLME 361

Query: 123 LMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            M++   L PD  +YN LI+ L   G  ++AL F  +    G   D + YS +   F   
Sbjct: 362 NMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKN 421

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             I  A  ++  +  KG +PD+VTYT +I G+C++G ++E  K+ + M   G K N + Y
Sbjct: 422 KNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTY 481

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VLL+ +C +G+  EA  ++   E     P+ +TYS ++ GL ++ K+ +A  L  EM  
Sbjct: 482 TVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIE 541

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   PN      ++  LC  + +  A+ Y +  +   C  +VV +  +I G+ ++G++  
Sbjct: 542 KGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDA 601

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ +   +      P  +T+ +L     K  ++ +A  L+  +   G++P+ VTY   ++
Sbjct: 602 ALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIH 661

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C+ G +  ++ LL++M  +   P    Y  VI+ LC     +EA +LL  +       
Sbjct: 662 RFCQWGRVDDMMKLLEKMIARQ--PFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKL 719

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D  T + +I S+    +   A+++  QM+  NL P       +   L ++G    AD L+
Sbjct: 720 DAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLM 779

Query: 542 VSLQEHNI 549
           +   E  I
Sbjct: 780 LRFVERGI 787



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 186/398 (46%), Gaps = 45/398 (11%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W+     ++  +  DI++ T L  G           ++  +M  +G + +  A+S ++ S
Sbjct: 191 WRYRHDAIVYYTMLDILSKTRLCQG---------ARRILRLMTRRGIERSPEAFSYVMVS 241

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
             ++G +  AL +L  M+  G++PDL   +  I  L K +K+ KA++    M    I P 
Sbjct: 242 YSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEP- 300

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
                                             D+V YN +I GY  +  I +A++L  
Sbjct: 301 ----------------------------------DIVSYNCLIKGYCDVHRIDDALELIA 326

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT-IKLHGLEPSAVTYTTFMNAYCEE 426
           ++  K   P  V++ +++   CK+ KV + +RL++  ++   L P  VTY T + A  + 
Sbjct: 327 EMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKH 386

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G+    L  L+E E K      V Y+ V+   CK   + +A  L+ DMY  G  PD +TY
Sbjct: 387 GHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTY 446

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
             II  FC+   + +A ++L QM+ H  +P + TY +L++GLC NG    A  ++   +E
Sbjct: 447 TAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEE 506

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           H  +   + Y+ ++     EG + +A     +M+EKGF
Sbjct: 507 HWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGF 544



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 1/253 (0%)

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            D ++Y  M+D   K      A ++ R +  + I  S   F+ ++  + + G + +A R+
Sbjct: 195 HDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRI 254

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L  ++  G+EP      T +    +   +++ L  L+ M+   I P  V+Y  +IKG C 
Sbjct: 255 LTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCD 314

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH-NLEPTSA 519
             ++ +A++L+ +M   G  PD+++Y T++   CK + + +  +L+  M  + NL P   
Sbjct: 315 VHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQV 374

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYN LI  L  +G   +A   L   +E    + KV Y+ ++ + C   ++ KA +    M
Sbjct: 375 TYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDM 434

Query: 580 VEKGFEISIRDYT 592
             KG    +  YT
Sbjct: 435 YSKGCNPDVVTYT 447


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/548 (27%), Positives = 272/548 (49%), Gaps = 28/548 (5%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRNVY 64
           +TG       ++ K++   +K  +  YN+++++L    ++    DLY ++ V     NV 
Sbjct: 180 KTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVV 239

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + ++ G C    L++A   L E   K   P V + N ++    K G  + AK +  +M
Sbjct: 240 TYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVM 299

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +K  + PD  +YN LI G      ++ A      M + GV P+  TY+ +  G      +
Sbjct: 300 MKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMV 359

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  + +++  K   PDIVTYT LI G C+  ++E  + L + M  QG + +V +Y++L
Sbjct: 360 DEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTIL 419

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L ++CK GR++ A      +   G   ++ TY+++I GLCK D   +A+ L ++M  K  
Sbjct: 420 LDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGC 479

Query: 305 SPNSFAHGAILLGLCEK-----------EMIT------------EARMYFDSLIMSNCIQ 341
            P++     I+  L EK           EMI             EA++   +++   CI+
Sbjct: 480 MPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVL-AVMTKACIK 538

Query: 342 -DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            DVV Y  ++DGY  +  +  A  ++  + +  ++P++  +  +I G CK   V +A  L
Sbjct: 539 PDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSL 598

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            + +K   + P+ VTYT+ ++A C+  +++R +ALL+EM+   I P   +YT+++ GLCK
Sbjct: 599 FEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCK 658

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             +L+ A ++ + + V G   +   Y  +I   CK     +A  L  +M      P + T
Sbjct: 659 SGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVT 718

Query: 521 YNILIDGL 528
           ++I+I  L
Sbjct: 719 FDIIIWAL 726



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 229/455 (50%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P  F +N ++  L         +        +G  PD  T +IL   F  L+ I+ A+ V
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           +  +L +G  P+ +T   LI G C  G +++ L   + +++QGF+LN ++Y  L++ +CK
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           +G       LL ++E   +KPD+V Y+ +I  LCK   +  A  LY+EM  K ISPN   
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + A++ G C    + EA    + + + N   DV  +N +ID   K G +  A  +   ++
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           +  I P +VT+NSLI G+    KV +A+ +  ++   G+ P+  TYTT ++  C+E  + 
Sbjct: 301 KACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVD 360

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             ++L +EM+ K + P  VTYT +I GLCK   L+ A+ L + M   G+ PD  +Y  ++
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 420

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
            + CK   L  A +   ++ +        TYN++I+GLC       A  L   ++     
Sbjct: 421 DALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCM 480

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
              + + TII A   + +  KA     +M+ +G +
Sbjct: 481 PDAITFKTIICALFEKDENDKAEKILREMIARGLQ 515



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 155/647 (23%), Positives = 292/647 (45%), Gaps = 42/647 (6%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           S L N +H   +  L+   + +    ++ T +I+++  C  + +  A   L     + + 
Sbjct: 71  SSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYH 130

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFC--LMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           P+ ++LN ++   C  G  E+ K L+    ++  G   +  SY  LI+GLC  G  +   
Sbjct: 131 PNAITLNTLIKGLCFRG--EIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVA 188

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
                +  H V+PD + Y+ +         +  A  +  ++++KG  P++VTY  L+ G+
Sbjct: 189 RLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGF 248

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C +G+++E   L   M  +    +V  ++ L+ ++ K G++  A  +L  M    +KPD+
Sbjct: 249 CIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDV 308

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VTY+ LI G    +KV  A  ++  M    ++PN   +  ++ GLC+++M+ EA   F+ 
Sbjct: 309 VTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEE 368

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +   N I D+V Y  +IDG  K  ++  A+ L +++ E+ I P + ++  L+   CK G+
Sbjct: 369 MKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGR 428

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + +A+     + + G   +  TY   +N  C+       + L  +ME K   P  +T+  
Sbjct: 429 LENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKT 488

Query: 454 VI---------------------KGL--CKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           +I                     +GL   ++ +L+EA  +L  M    + PD +TY T++
Sbjct: 489 IICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLM 548

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             +    +L+ A  +   M    + P    Y I+IDGLC    +  A  L   ++  N+ 
Sbjct: 549 DGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMF 608

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSF 595
              V YT++I A C    + +A+    +M E G +  +  YT               K  
Sbjct: 609 PNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEI 668

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           F  +L  G+  + ++   M+    + G      +L   M   G +PD
Sbjct: 669 FQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPD 715



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 153/565 (27%), Positives = 256/565 (45%), Gaps = 23/565 (4%)

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           +D + +   P   +  + ++  L         I   ++       P + +LN +M+ +C 
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           L     A  +   +LK G HP+A + N LI GLC  G +++AL F + +   G + + ++
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y  L  G     +     ++++KL      PD+V Y  +I   C+   + +   L   M+
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +G   NV+ Y+ L+   C  G + EA  LL EM+   + PD+ T++ LI  L K+ K+ 
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A  +   M    I P+   + +++ G      +  A+  F S+  S    +V  Y  MI
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMI 350

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           DG  K   + EA+ L+ ++  K + P IVT+ SLI G CKN  +  A  L   +K  G++
Sbjct: 351 DGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 410

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P   +YT  ++A C+ G ++      Q +  K       TY V+I GLCK     EA+ L
Sbjct: 411 PDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDL 470

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE--------------- 515
              M   G  PD IT+ TII +  +  +  KA ++L +M    L+               
Sbjct: 471 KSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLA 530

Query: 516 --------PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
                   P   TY  L+DG  +  +LK+A  +  S+ +  ++     YT +I   C + 
Sbjct: 531 VMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKK 590

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT 592
            V +AM+ F +M  K    +I  YT
Sbjct: 591 TVDEAMSLFEEMKHKNMFPNIVTYT 615



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/581 (23%), Positives = 262/581 (45%), Gaps = 58/581 (9%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  +   +I+GLC+    +     L++  G    P VV  N I+   CK      A  L+
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-------------------GRH 162
             M+  G+ P+  +YN L++G CI G ++EA    N+M                   G+ 
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKE 286

Query: 163 G----------------VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G                ++PD +TY+ L  G+  L+++  A  V   +   G  P++ TY
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T +I G C+   V+E + L E M  +    +++ Y+ L+  +CK+  ++ A+ L  +M+ 
Sbjct: 347 TTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKE 406

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G++PD+ +Y+IL+  LCK  ++  A + +  +  K    N   +  ++ GLC+ ++  E
Sbjct: 407 QGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGE 466

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI-----EKR-------- 373
           A      +    C+ D + +  +I    +     +A ++ R++I     E R        
Sbjct: 467 AMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAK 526

Query: 374 ----------ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
                     I P +VT+ +L+ G+    ++  A+ +  ++   G+ P+   YT  ++  
Sbjct: 527 IVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGL 586

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++  +   ++L +EM+ K + P  VTYT +I  LCK   L+ A+ LL++M   G+ PD 
Sbjct: 587 CKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDV 646

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            +Y  ++   CK   L  A ++  ++ +         Y  +I+ LC  G    A  L   
Sbjct: 647 YSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXK 706

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +++       V +  II A   + +  KA     +M+ +G 
Sbjct: 707 MEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 228/476 (47%), Gaps = 17/476 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL----YNLRHTDIMWDLYDDIKVSETPRNV 63
           + G +  A  V+A M +  +K  + TYNSL+    +  +  +  +  Y   +   TP NV
Sbjct: 285 KEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTP-NV 343

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +IDGLC++  + +A+   +E   K   P +V+  +++   CK    E A  L   
Sbjct: 344 RTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKK 403

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M + G+ PD +SY IL+  LC  G +E A EF   +   G   +  TY+++  G      
Sbjct: 404 MKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADL 463

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A  +  K+  KG  PD +T+  +IC   +    ++  K+   M+++G +        
Sbjct: 464 FGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQ-------- 515

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
                 +  R+ EA  +L  M    +KPD+VTY  L+ G    +++  A  ++  M    
Sbjct: 516 ----EARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMG 571

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++PN   +  ++ GLC+K+ + EA   F+ +   N   ++V Y  +ID   K  ++  A+
Sbjct: 572 VTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAI 631

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L +++ E  I P + ++  L+ G CK+G++  A+ +   + + G   +   YT  +N  
Sbjct: 632 ALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINEL 691

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           C+ G     L L  +ME K   P  VT+ ++I  L ++ +  +A ++L +M   G+
Sbjct: 692 CKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 145/301 (48%)

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A+  ++ M   R  P +F    IL  L   +        F     +    D+   NI+++
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
            +  L +I  A  +   ++++   P+ +T N+LI G C  G++  A    D +   G + 
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + V+Y T +N  C+ G  + +  LL+++E  ++ P  V Y  +I  LCK   L +A  L 
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            +M V G++P+ +TYN ++  FC    L++AF LLN+M L N+ P   T+N LID L   
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKE 286

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           G +K A  +L  + +  I    V Y ++I  +     V  A   F  M + G   ++R Y
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 592 T 592
           T
Sbjct: 347 T 347



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 156/354 (44%), Gaps = 26/354 (7%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A+ +  KMKE  ++  + +Y  LL  L      +   + +  + V     NV T +++I+
Sbjct: 397 AIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMIN 456

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIM---------SRYCKLGFAEVAKGL-- 120
           GLC+     +A+    +  GK   P  ++   I+          +  K+    +A+GL  
Sbjct: 457 GLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQE 516

Query: 121 ------------FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
                         +M K  + PD  +Y  L+ G  +   ++ A      M + GV P+ 
Sbjct: 517 ARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNV 576

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
             Y+I+  G      +  A  + +++  K   P+IVTYT LI   C+  ++E  + L + 
Sbjct: 577 QCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKE 636

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   G + +V +Y++LL  +CKSGR++ A  +   +   G   ++  Y+ +I  LCK   
Sbjct: 637 MKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGL 696

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
             +A+ L  +M  K   P++     I+  L EK+   +A      +I    +++
Sbjct: 697 FDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750


>gi|359476071|ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 629

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 274/582 (47%), Gaps = 22/582 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T +I++DG+     L+ A  F +E     F PS  SL  I+ ++  LG    +  +F
Sbjct: 9   NASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMSVF 68

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEA-LEFTNDMGRHGVEPDAITYSILAKGFHL 180
             ML+    P   + N+LI  L  AG   EA   F   +G+ G    A +Y+ +      
Sbjct: 69  EFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGK-GCLKCAHSYNPILWALCK 127

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             Q   A  ++  L   G+  +  +YT L+ G+ + G  EE   + + M   G K NVI 
Sbjct: 128 CGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVIT 187

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+V++  +C  GRI +AL +L +M   G  PD+VTY++++R L  QD+  +  +L   + 
Sbjct: 188 YTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVID 247

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K ISP+SF + A+  GL +++ +  A      +I + C  DV +YNI      +    G
Sbjct: 248 QKEISPDSFTYAALTGGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSG 307

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+ L + ++EK + P+ V++N+++ GFC+   + +A +L D  +     P  V++ T +
Sbjct: 308 EALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTIL 367

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +A C++GN   +  +L  ME + +    V+ T +I+  C   K+ E ++LLE M   G+ 
Sbjct: 368 SAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLN 427

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P  +T+N ++   CK   L  A ++  +       P + +YNILI      G+    + L
Sbjct: 428 PTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQL 487

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
           L  +    +    V Y + IK  C EG +  A             I +RD        ML
Sbjct: 488 LRDMYSWRLKPDAVTYGSFIKGLCKEGKISVA-------------IQLRD-------QML 527

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            +G  P   I   +L A  Q G    +  L   M   G  P+
Sbjct: 528 ESGLTPTITIYNTILAAMFQRGKFWDIVSLLKDMTMDGCEPN 569



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 219/454 (48%), Gaps = 8/454 (1%)

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY---GLH 130
           C QS    A+L+  +  G     +  S  A++  + K G  E A   FC++ +    G  
Sbjct: 128 CGQSYTALALLYSLKKMGAVH--NAASYTALVYGFSKEGLWEEA---FCMLDEMKIDGCK 182

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  +Y +++  LC  G + +AL+    MG+ G +PD +TY+++ +      +     ++
Sbjct: 183 PNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGEL 242

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           +Q +  K   PD  TY  L  G  +   V    KL   ++S G  ++V  Y++    +C+
Sbjct: 243 LQVIDQKEISPDSFTYAALTGGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCR 302

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
             +  EAL LL  M   GL P  V+Y+ ++ G C+++ + +A+QL++       SP+  +
Sbjct: 303 ENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVS 362

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
              IL   C++   +  R     +       +VV    +I  +  +G I E ++L   +I
Sbjct: 363 FNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMI 422

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
              ++P++VTFN L+   CKNG +  A R+    +  G  P+  +Y   ++A   EGN  
Sbjct: 423 RNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDS 482

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
            +  LL++M +  + P  VTY   IKGLCK+ K+  A+QL + M   G+TP    YNTI+
Sbjct: 483 LVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTITIYNTIL 542

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            +  +         LL  M +   EP + +  IL
Sbjct: 543 AAMFQRGKFWDIVSLLKDMTMDGCEPNAVSIEIL 576


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 154/592 (26%), Positives = 260/592 (43%), Gaps = 73/592 (12%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +++IDGLC+Q RL+DA   L E          V+ + ++    K   A+ A GL   M+ 
Sbjct: 284 NLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVS 343

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL----------AK 176
           +G   D   Y+  I  +   G+ME+A    + M   GV P A  Y+ L           K
Sbjct: 344 HGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRK 403

Query: 177 GFHLLSQI-------------------------SGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           G+ LL +I                          GA+ +++++   G  P++V YT LI 
Sbjct: 404 GYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIK 463

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
            + Q     + +++ + M  QG   +   Y+ L+  + K+ ++DEA   L EM   G KP
Sbjct: 464 TFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKP 523

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D  TY   I G  +  +   A +   EM    + PN      ++   C+K  + EA   F
Sbjct: 524 DAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAF 583

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
            S++    + D   Y ++++G VK G + +A +++ ++  K I+P + ++ +LI GF K 
Sbjct: 584 RSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKL 643

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G +  A  + D +   GL  + + Y   +  +C  G I++   LL EM  K   P  VTY
Sbjct: 644 GNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTY 703

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ--- 508
             +I G CK   L EA QL ++M + G+ PD   Y T++   C+  D+ +A  +      
Sbjct: 704 CTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEK 763

Query: 509 -------------MWLHNL----------------------EPTSATYNILIDGLCVNGD 533
                         W+                         +P   TYNI+ID LC  G+
Sbjct: 764 GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGN 823

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           L+ A  L   +Q+ N+  T + YT+++  +   G   +  + F +++  G E
Sbjct: 824 LEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIE 875



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 246/550 (44%), Gaps = 41/550 (7%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPR 61
           V S+ G +  A  +   M    +    + Y SL+   +  ++    ++L  +IK      
Sbjct: 359 VMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVI 418

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + YT    + G+C    L  A   ++E       P+VV    ++  + +      A  + 
Sbjct: 419 SPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVL 478

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+ PD F YN LI GL  A  M+EA  F  +M  +G +PDA TY     G+   
Sbjct: 479 KEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEA 538

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            + + A K ++++L  G  P+ V  T LI  YC+ G V E       M+ QG   +   Y
Sbjct: 539 GEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTY 598

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL++ + K+G++++A  + +EM   G+ PD+ +Y  LI G  K   + KA  +++EM  
Sbjct: 599 TVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQ 658

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             ++ N   +  +L G C    I +A+   D +       + V Y  +IDGY K G++ E
Sbjct: 659 AGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAE 718

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA------------------------ 397
           A QL+ ++  K + P    + +L+ G C+   V  A                        
Sbjct: 719 AFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINW 778

Query: 398 --------------RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
                          RL+D       +P+ VTY   ++  C+EGN++    L   M+   
Sbjct: 779 VFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKAN 838

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           + PT +TYT ++ G  K  +  E   + +++   G+ PD I Y+ II +F K     KA 
Sbjct: 839 LMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKAL 898

Query: 504 QLLNQMWLHN 513
            LL+QM+  N
Sbjct: 899 VLLDQMFAKN 908



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 143/579 (24%), Positives = 262/579 (45%), Gaps = 48/579 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           + R   V     ++ ++K+ ++ +S  TY + +  +  +   D  +++  ++  S    N
Sbjct: 395 FFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPN 454

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V   + +I    Q+SR  DA+  L+E   +   P     N+++    K    + A+    
Sbjct: 455 VVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLL 514

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP---------------- 166
            M++ G  PDAF+Y   I G   AG    A ++  +M   GV P                
Sbjct: 515 EMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKG 574

Query: 167 -------------------DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
                              DA TY++L  G     +++ A ++  ++  KG  PD+ +Y 
Sbjct: 575 KVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYG 634

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            LI G+ ++GN+++   + + M+  G   NVI Y++LL   C+SG I++A  LL EM   
Sbjct: 635 TLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK 694

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  P+ VTY  +I G CK   + +A QL++EM  K + P+SF +  ++ G C    +  A
Sbjct: 695 GFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 754

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE----KRISPSIVTFNS 383
              F++     C      +N +I+   K G       +  +L++    K   P+ VT+N 
Sbjct: 755 ITIFET-NEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNI 813

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           +I   CK G +  A+ L   ++   L P+ +TYT+ +N Y + G    + ++  E+    
Sbjct: 814 MIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAG 873

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI-----TYNTIIRSFCKCKD 498
           I P ++ Y+V+I    K+    +A+ LL+ M+      D       T   ++  F K  +
Sbjct: 874 IEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 933

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           +  A +++  M      P S+T   LI+  C++ + + A
Sbjct: 934 MEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMA 972



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 159/637 (24%), Positives = 275/637 (43%), Gaps = 78/637 (12%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIV 69
           G +  A  V+ +M E    V+ + ++S++  LR             V ++   V    I+
Sbjct: 111 GSIEKAHSVVIRMIERKWPVA-EVWSSIVRCLREF-----------VGKSDDRVLLFGIL 158

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLG----FAEVAKGLFCL 123
           IDG  ++  L +A+     T   +    PS+   N ++    K      F +V KG    
Sbjct: 159 IDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKG---- 214

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSME---------------------EALEFTNDMGRH 162
           M++  +  D  SY +LI   C  G+++                     EALE    M   
Sbjct: 215 MVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCK 274

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G+ P   +Y++L  G     ++  A  ++ ++   G   D V Y++LI G  +  N +  
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
             L   M+S GF ++ + Y   +  M K G +++A  L   M   G+ P    Y+ LI G
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEG 394

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
             ++  V K  +L  E+  + I  + + +G  + G+C    +  A      +  S C  +
Sbjct: 395 FFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPN 454

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           VV+Y  +I  +++    G+AV++ +++ E+ I+P    +NSLI G  K  K+ +AR  L 
Sbjct: 455 VVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLL 514

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV------------- 449
            +  +G +P A TY  F++ Y E G        ++EM    + P  V             
Sbjct: 515 EMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKG 574

Query: 450 ----------------------TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
                                 TYTV++ GL K  K+ +A ++  +M   G+ PD  +Y 
Sbjct: 575 KVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYG 634

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           T+I  F K  +++KA  + ++M    L      YN+L+ G C +G+++ A  LL  +   
Sbjct: 635 TLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK 694

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
                 V Y TII  +C  GD+ +A   F +M  KG 
Sbjct: 695 GFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGL 731



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 143/557 (25%), Positives = 238/557 (42%), Gaps = 87/557 (15%)

Query: 136 YNILIHGLCIAGSMEEAL---EFTNDMGRHGVEPDAITYSILAKGFHLL------SQISG 186
           + ILI G    G ++EA+     T D+       D      LA+  HLL      +++  
Sbjct: 155 FGILIDGYIEKGFLDEAVFVFSSTKDL-------DLDLVPSLARCNHLLDALLKRNRLDL 207

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE---------------------EGLKL 225
            W V + ++ +    D+ +Y +LI  +C+ GNV+                     E L+L
Sbjct: 208 FWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALEL 267

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
           ++ M  +G   +  +Y++L+  +CK  R+++A  LL EM +VGL  D V YSILI GL K
Sbjct: 268 KKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLK 327

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
                 A  L +EM S         HG  +                          D ++
Sbjct: 328 GRNADAANGLVHEMVS---------HGFSI--------------------------DPMM 352

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y+  I    K G + +A  L+  +I   ++P    + SLI GF +   V     LL  IK
Sbjct: 353 YDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIK 412

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
              +  S  TY T +   C  G++     +++EM      P  V YT +IK   ++ +  
Sbjct: 413 KRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFG 472

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           +AV++L++M   G+ PD   YN++I    K K + +A   L +M  +  +P + TY   I
Sbjct: 473 DAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFI 532

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            G    G+  +AD  +  + E  +   KV  T +I  +C +G V +A + F  MVE+G  
Sbjct: 533 SGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGIL 592

Query: 586 ISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
              + YT               +  F  M   G  PD      ++  F + G++     +
Sbjct: 593 GDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSI 652

Query: 631 AAVMIKSGLLPDKFLIN 647
              M+++GL  +  + N
Sbjct: 653 FDEMVQAGLTSNVIIYN 669


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 148/559 (26%), Positives = 277/559 (49%), Gaps = 9/559 (1%)

Query: 11  MVHDAVFVIAKMKELDLKVS---IQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNV-YTN 66
           M   A+ ++ +M+E+ ++ S   +     LL  +     +W L+ D+ +   P+   YT 
Sbjct: 1   MGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDV-IRRGPQPCKYTF 59

Query: 67  SIVIDGLCQQS--RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           S +I G C++    L +++L L      E  P+  + N +++  C  G    A   F LM
Sbjct: 60  SGIILGFCRKGCIHLGESLLHLMPKFHCE--PNAFAYNIVINACCIRGRTSDALAWFNLM 117

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G +P   ++N +I+  C  G++ EA +  + +   G  P+AI Y+ L  G+  + +I
Sbjct: 118 IERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREI 177

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  + +++  KG  PD +T+ +L+ G+ + G  E+G +L + +   G   +   + + 
Sbjct: 178 DQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDIS 237

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +S +C +GR+DEA+  L +M   GL P ++ ++ +I    +     KA + Y  M    +
Sbjct: 238 VSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGL 297

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +P+     ++L+GL     + EA      +I      + + + +++D + K G++  A  
Sbjct: 298 TPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQS 357

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+ ++  + I P +V F++ I G  K G V +A  +   +   GL P+   Y + +  +C
Sbjct: 358 LWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFC 417

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G +   L L + M  + + P   T  ++I GLCKQ +++ A+ +  DM+  G++PD I
Sbjct: 418 KCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDII 477

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TYNT+I  +CK  D+  A  L+N+M+     P   TYNI I G C +  +  A  +L  L
Sbjct: 478 TYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDEL 537

Query: 545 QEHNISLTKVAYTTIIKAH 563
               I     A    + AH
Sbjct: 538 VSAGILSFSFACPPTLNAH 556



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 236/493 (47%), Gaps = 10/493 (2%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P   + + I+  +C+ G   + + L  LM K+   P+AF+YNI+I+  CI G   +AL +
Sbjct: 54  PCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAW 113

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            N M   G  P  +T++ +   F     +  A K+   L   G  P+ + Y  L+ GY +
Sbjct: 114 FNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVK 173

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +  +++   L E M  +G   + I +++L+S   K GR ++   LL ++  +GL PD   
Sbjct: 174 MREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSL 233

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL-----GLCEKEMITEARMY 330
           + I + GLC   ++ +A++   +M  K +SP+  A  +++      GL +K       M 
Sbjct: 234 FDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMV 293

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
              L  S      +L  + I+G ++     EA +L  Q+IEK +S + + F  L+  F K
Sbjct: 294 HFGLTPSPSTCSSLLMGLSINGRLQ-----EATELIGQMIEKGLSVNNMAFTVLLDKFFK 348

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G V  A+ L   ++  G+ P  V ++ F++   ++G ++    +  EM  K + P +  
Sbjct: 349 RGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFA 408

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  +I G CK  KL EA++L + M   G+ PD  T N II   CK   +R A  +   M 
Sbjct: 409 YNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMH 468

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              L P   TYN LI+G C   D+ NAD L+  +     +     Y   I   C+   ++
Sbjct: 469 QTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMN 528

Query: 571 KAMTFFCQMVEKG 583
           +A+    ++V  G
Sbjct: 529 RAVLMLDELVSAG 541



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 229/473 (48%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  +++ G  P  ++++ +I G C  G +       + M +   EP+A  Y+I+     
Sbjct: 43  LFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACC 102

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           +  + S A      ++ +G +P +VT+  +I  +C+ GNV E  KL + +   GF  N I
Sbjct: 103 IRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAI 162

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L++   K   ID+A  L  EM   G+ PD +T++IL+ G  K  +     +L  ++
Sbjct: 163 MYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDI 222

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               + P+       + GLC    + EA  +   ++       ++ +N +I  Y + G  
Sbjct: 223 SVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 282

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A + Y+ ++   ++PS  T +SL+ G   NG++ +A  L+  +   GL  + + +T  
Sbjct: 283 DKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVL 342

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ + + G++    +L  EME + I P  V ++  I GL KQ  ++EA  +  +M   G+
Sbjct: 343 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 402

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+   YN++I  FCKC  L +A +L   M    L P   T N++I GLC  G +++A  
Sbjct: 403 IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 462

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           + + + +  +S   + Y T+I  +C   D+  A     +M   G    +  Y 
Sbjct: 463 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYN 515



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR----- 61
           S+ G+V +A  V  +M    L  +   YNSL+           L + +K+ +  R     
Sbjct: 382 SKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCG---KLNEALKLEKVMRHRGLL 438

Query: 62  -NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            +++T +++I GLC+Q R++ AI    +       P +++ N +++ YCK      A  L
Sbjct: 439 PDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNL 498

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
              M   G +PD  +YNI IHG C +  M  A+   +++   G+
Sbjct: 499 VNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGI 542


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 142/530 (26%), Positives = 275/530 (51%), Gaps = 6/530 (1%)

Query: 69  VIDGLCQQSRLQDAILFLQ--ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +++   + ++ ++A LF    +TAG    P++ + N ++   CK    E  KGL   M +
Sbjct: 120 MLNAFIESNQWREAELFFTYFQTAG--MSPNLQTYNILIKISCKKRQFEKGKGLLTWMFE 177

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL+PD  SY  LI+ L  +G++ +A+E  ++M   GV PD + Y+IL  GF        
Sbjct: 178 NGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVK 237

Query: 187 AWKVIQKLLIKGSD-PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
           A ++ ++LL + S  P + TY ++I G C++G ++E +++   M       ++  +S ++
Sbjct: 238 ANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMI 297

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             + K+G  + A  +  EM   GL PD+ TY+ ++ GL +  K++K  +L+N M SK   
Sbjct: 298 HGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM-SKNNC 356

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
            N  ++  ++ GL + + + +A  Y+  L       D   Y ++I+G  K G + +A+++
Sbjct: 357 CNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRI 416

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             +   +        ++S+++G CK G +  A  L+  +K +  + ++  + + +N Y  
Sbjct: 417 LEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVR 476

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
              ++  +++L+EM++K   PT V+Y  +I GLCK  +  +A   L++M   G+ PD IT
Sbjct: 477 AFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMIT 536

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           Y+ +I   C+ + +  A  L +Q     L+P    +NI+I GLC    +  A  +   ++
Sbjct: 537 YSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMR 596

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF 595
           + N     V + TI++     GD  +A+  + +++E G +  I  Y  +F
Sbjct: 597 QVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITF 646



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 260/502 (51%), Gaps = 2/502 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEVAKGL 120
           ++ +   +I+ L +   L DA+    E + +   P V+  N ++  + + G F +  +  
Sbjct: 183 DILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIW 242

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             L+ +  ++P   +YNI+I+GLC  G ++E++E  N M ++   PD  T+S +  G   
Sbjct: 243 KRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSK 302

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
               + A KV Q+++  G  PD+ TY  ++ G  + G + +  +L  VM S+    N+++
Sbjct: 303 AGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM-SKNNCCNIVS 361

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y++L+  +  + ++++A+     +   GLK D  TY +LI GLCK   ++KA+++  E  
Sbjct: 362 YNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAE 421

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           ++    ++FA+ +++ GLC+K M+ +A      +  +    +  ++N +I+GYV+   + 
Sbjct: 422 NEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLE 481

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+ + R++  K  +P++V++N++I G CK  + +DA   L  +   GL+P  +TY+  +
Sbjct: 482 EAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLI 541

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C    +   L L  +   K + P    + ++I GLC   K+  A+++   M  +   
Sbjct: 542 DGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCV 601

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +T+NTI+    K  D  +A ++ +++    L+P   +YNI   GLC    + +A   
Sbjct: 602 PDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEF 661

Query: 541 LVSLQEHNISLTKVAYTTIIKA 562
           L    +  I      +  +++A
Sbjct: 662 LYDALDRGILPNAPTWNVLVRA 683



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/558 (24%), Positives = 264/558 (47%), Gaps = 40/558 (7%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
            P + S N++++ + +      A+  F      G+ P+  +YNILI   C     E+   
Sbjct: 111 NPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKG 170

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
               M  +G+ PD ++Y  L         +  A ++  ++ ++G +PD++ Y +LI G+ 
Sbjct: 171 LLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFL 230

Query: 215 QIGNVEEGLKLREVMLSQG-FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           + G+  +  ++ + +L++     +V  Y+++++ +CK G++DE++ +   M+     PDL
Sbjct: 231 RKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDL 290

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            T+S +I GL K    + A +++ EM    +SP+   + A+L GL     + +    ++ 
Sbjct: 291 FTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNV 350

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +  +NC  ++V YN++I G +    + +A+  ++ L E+ +     T+  LI G CKNG 
Sbjct: 351 MSKNNCC-NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGY 409

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           +  A R+L+  +  G +     Y++ ++  C++G +++ + L+ +M+          +  
Sbjct: 410 LNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNS 469

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I G  + +KL+EA+ +L +M      P  ++YNTII   CK +    A+  L +M    
Sbjct: 470 LINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEG 529

Query: 514 LEPTSATYNILIDGLCVNGDLKNA-----DC----LLVSLQEHNISLTKVAYTTIIKAHC 564
           L+P   TY++LIDGLC    +  A      C    L   LQ HNI         II   C
Sbjct: 530 LKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNI---------IIHGLC 580

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
               V  A+  F QM             +   C+       PD      ++   ++ GD 
Sbjct: 581 TAQKVDVALEIFTQM-------------RQVNCV-------PDLVTHNTIMEGLYKAGDC 620

Query: 625 GSVFELAAVMIKSGLLPD 642
               ++   ++++GL PD
Sbjct: 621 VEALKIWDRILEAGLQPD 638



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 247/499 (49%), Gaps = 9/499 (1%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN-LRHTDI-----MWDLYDDIKVSETP 60
           +++G + DAV +  +M    +   +  YN L+   LR  D      +W     +  S   
Sbjct: 195 AKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRL--LTESSVY 252

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            +V T +I+I+GLC+  +L +++         E  P + + ++++    K G    A+ +
Sbjct: 253 PSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKV 312

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M++ GL PD  +YN ++ GL   G + +  E  N M ++    + ++Y++L +G   
Sbjct: 313 FQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIVSYNMLIQGLLD 371

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             ++  A    Q L  +G   D  TY +LI G C+ G + + L++ E   ++G  L+  A
Sbjct: 372 NKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFA 431

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS ++  +CK G +++A+ L+++M+    K +   ++ LI G  +  K+ +AI +  EM 
Sbjct: 432 YSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMK 491

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           SK  +P   ++  I+ GLC+ E  ++A +    ++      D++ Y+++IDG  +   + 
Sbjct: 492 SKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVD 551

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A+ L+ Q I KR+ P +   N +I+G C   KV  A  +   ++     P  VT+ T M
Sbjct: 552 MALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIM 611

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
               + G+    L +   +    + P  ++Y +  KGLC   ++ +A++ L D    G+ 
Sbjct: 612 EGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGIL 671

Query: 481 PDQITYNTIIRSFCKCKDL 499
           P+  T+N ++R+    K L
Sbjct: 672 PNAPTWNVLVRAVVDDKPL 690



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 167/379 (44%), Gaps = 39/379 (10%)

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK---RISPNSFAHGAILLGLCEKEMITEA 327
           P +++ +++++ L  +   + A+ +++  C        P  F H  IL  L + +++   
Sbjct: 5   PKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHH--ILRRLMDPKLVVHV 62

Query: 328 RMYFDSLIMSNCI--QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSL 384
               D +    C   +DV L    I  Y K     +A+ L++ +++    +P I +FNS+
Sbjct: 63  GRIVDLMRAQRCTCSEDVALS--AIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSM 120

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           +  F ++ +  +A       +  G+ P+  TY   +   C++   ++   LL  M    +
Sbjct: 121 LNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGL 180

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  ++Y  +I  L K   L +AV+L ++M V GV PD + YN +I  F +  D  KA  
Sbjct: 181 NPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKA-- 238

Query: 505 LLNQMWLHNLE-----PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
             N++W   L      P+  TYNI+I+GLC  G L  +  +   ++++  S     ++++
Sbjct: 239 --NEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSM 296

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
           I      G+ + A   F +M+E                    +G  PD      ML    
Sbjct: 297 IHGLSKAGNFNAAEKVFQEMIE--------------------SGLSPDVRTYNAMLSGLF 336

Query: 620 QGGDLGSVFELAAVMIKSG 638
           + G L   FEL  VM K+ 
Sbjct: 337 RTGKLNKCFELWNVMSKNN 355



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 129/272 (47%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + +  S ++ GLC++  L+ A+  + +        +    N++++ Y +    E A  + 
Sbjct: 428 DTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVL 487

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M      P   SYN +I+GLC A    +A     +M   G++PD ITYS+L  G    
Sbjct: 488 REMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRG 547

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  +  + + K   PD+  + ++I G C    V+  L++   M       +++ +
Sbjct: 548 EKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTH 607

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++  + K+G   EAL +   +   GL+PD+++Y+I  +GLC   +V  AI+   +   
Sbjct: 608 NTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALD 667

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           + I PN+     ++  + + + + E  +  +S
Sbjct: 668 RGILPNAPTWNVLVRAVVDDKPLMEYALNTES 699



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 21/242 (8%)

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           + + + G  P   ++ + +NA+ E    +         +T  + P   TY ++IK  CK+
Sbjct: 103 NMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKK 162

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            + ++   LL  M+  G+ PD ++Y T+I +  K  +L  A +L ++M +  + P    Y
Sbjct: 163 RQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCY 222

Query: 522 NILIDGLCVNGDLKNADCLLVSL-QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           NILIDG    GD   A+ +   L  E ++  +   Y  +I   C  G + ++M  + +M 
Sbjct: 223 NILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMK 282

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           +                    N   PD      M+    + G+  +  ++   MI+SGL 
Sbjct: 283 K--------------------NEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLS 322

Query: 641 PD 642
           PD
Sbjct: 323 PD 324



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 17/208 (8%)

Query: 454 VIKGLCKQWKLQEAVQLLEDMY-VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            IK   K     +A+ L ++M  + G  P   ++N+++ +F +    R+A          
Sbjct: 84  AIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTA 143

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            + P   TYNILI   C     +    LL  + E+ ++   ++Y T+I A    G++  A
Sbjct: 144 GMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDA 203

Query: 573 MTFFCQMVEKGFEISIR-------------DYTKS---FFCMMLSNGFPPDQEICEVMLI 616
           +  F +M  +G    +              D+ K+   +  ++  +   P  E   +M+ 
Sbjct: 204 VELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMIN 263

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPDKF 644
              + G L    E+   M K+   PD F
Sbjct: 264 GLCKLGKLDESMEMWNRMKKNEKSPDLF 291


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 155/625 (24%), Positives = 298/625 (47%), Gaps = 39/625 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + ++  + +A  VI  M++   + +   Y +L+  L      D M  L+  ++      N
Sbjct: 178 FVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEAN 237

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+  + ++    ++ R+  A+  L E     F   +V  N  +  + K+G  ++A   F 
Sbjct: 238 VHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFH 297

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   GL PD  +Y  LI  LC A  ++EA+E   ++  +   P    Y+ +  G+    
Sbjct: 298 EMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAG 357

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A+ ++++   KG  P ++ Y  ++    + G VEE L++ + M  Q    N+  Y+
Sbjct: 358 KFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYN 416

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L+  +CK+G ++ AL +   M+  GL P+++T +I+I  LCK  K+ +A  ++  +  K
Sbjct: 417 ILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHK 476

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             SP+S    +++ GL  +  + +A   ++ ++ S+ I +VV+Y  +I  + K G   + 
Sbjct: 477 VCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDG 536

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT----- 417
            ++Y++++ +  SP ++  NS +    K G+V   R L + IK  GL P   +Y+     
Sbjct: 537 HKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHG 596

Query: 418 ------------------------------TFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
                                         T ++ +C+ G + +   LL+EM+TK + PT
Sbjct: 597 LVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPT 656

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            VTY  V+ GL K  +L EA  L E+   IGV  + + Y+++I  F K   + +A+ +L 
Sbjct: 657 VVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILE 716

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           ++    L P S T+N L+D L    ++  A     +++    S   + Y+ +I   C   
Sbjct: 717 ELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIR 776

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT 592
             +KA  F+ +M ++G + +   YT
Sbjct: 777 KFNKAFVFWQEMQKQGLKPNNITYT 801



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 265/540 (49%), Gaps = 14/540 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y   G   +A  ++ + K      S+  YN +L  L     + +   ++D+++    P N
Sbjct: 353 YGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAP-N 411

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGL 120
           + T +I+ID LC+   L+ A L +Q+T  KE G  P+++++N ++ R CK    + A  +
Sbjct: 412 LTTYNILIDMLCKAGELE-AALKVQDTM-KEAGLFPNIMTVNIMIDRLCKAQKLDEACSI 469

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  +      PD+ ++  LI GL   G +++A      M      P+ + Y+ L + F  
Sbjct: 470 FLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFK 529

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +     K+ ++++ +G  PD++     +    + G VE+G  L E + +QG   +V +
Sbjct: 530 CGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRS 589

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS+L+  + K+G   E   L YEM+  GL  D++ Y+ +I G CK  KV KA QL  EM 
Sbjct: 590 YSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMK 649

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +K + P    +G+++ GL + + + EA M F+         +VV+Y+ +IDG+ K+G I 
Sbjct: 650 TKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRID 709

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  +  +L++K ++P+  T+N L+    K  ++ +A+     +K     P+A+TY+  +
Sbjct: 710 EAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMI 769

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N  C      +     QEM+ + + P ++TYT +I GL K   + EA  L +     G  
Sbjct: 770 NGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGV 829

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD   YN +I           A+ +  +  L      S T  +L+D       L  ADCL
Sbjct: 830 PDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDA------LHKADCL 883



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 252/512 (49%), Gaps = 7/512 (1%)

Query: 23  KELDLKVSIQ---TYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQ 76
           +ELDL  S+     YN+++         D  + L +  K      +V   + ++  L ++
Sbjct: 332 EELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRK 391

Query: 77  SRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSY 136
            ++++A L + +   ++  P++ + N ++   CK G  E A  +   M + GL P+  + 
Sbjct: 392 GKVEEA-LRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTV 450

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           NI+I  LC A  ++EA      +      PD+ T+  L  G     ++  A+ + +K+L 
Sbjct: 451 NIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLD 510

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
               P++V YT LI  + + G  E+G K+ + M+ +G   +++  +  +  + K+G +++
Sbjct: 511 SDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEK 570

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
              L  E++A GL PD+ +YSILI GL K     +  +L+ EM  + +  +  A+  ++ 
Sbjct: 571 GRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVID 630

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           G C+   + +A    + +        VV Y  ++DG  K+  + EA  L+ +     +  
Sbjct: 631 GFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDL 690

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           ++V ++SLI GF K G++ +A  +L+ +   GL P++ T+   ++A  +   I       
Sbjct: 691 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCF 750

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           Q M+     P  +TY+++I GLC   K  +A    ++M   G+ P+ ITY T+I    K 
Sbjct: 751 QNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKA 810

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            ++ +A  L ++       P SA YN +I+GL
Sbjct: 811 GNVMEARGLFDRFKASGGVPDSACYNAMIEGL 842



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 140/591 (23%), Positives = 266/591 (45%), Gaps = 39/591 (6%)

Query: 32  QTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
           + YN+ L      R+ D +  + +++ V+    + + +  ++    +  +L++A   ++ 
Sbjct: 134 EVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEM 193

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
               +F P+  +   ++         +    LF  M + G   +   +  L+      G 
Sbjct: 194 MRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGR 253

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           ++ AL   ++M  +    D + Y++    F  + ++  AWK   ++  +G  PD VTYT 
Sbjct: 254 IDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTT 313

Query: 209 L-----------------------------------ICGYCQIGNVEEGLKLREVMLSQG 233
           L                                   I GY   G  +E   L E    +G
Sbjct: 314 LIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKG 373

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              +VIAY+ +L+ + + G+++EAL +  EM      P+L TY+ILI  LCK  ++  A+
Sbjct: 374 CIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGELEAAL 432

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           ++ + M    + PN      ++  LC+ + + EA   F  L    C  D   +  +IDG 
Sbjct: 433 KVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGL 492

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            + G + +A  LY ++++    P++V + SLI  F K G+  D  ++   +   G  P  
Sbjct: 493 GRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDL 552

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           +   ++M+   + G +++  AL +E++ + + P   +Y+++I GL K    +E  +L  +
Sbjct: 553 MLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYE 612

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G+  D + YNT+I  FCK   + KA+QLL +M    L+PT  TY  ++DGL     
Sbjct: 613 MKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDR 672

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           L  A  L    +   + L  V Y+++I      G + +A     ++++KG 
Sbjct: 673 LDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 723



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 217/464 (46%), Gaps = 3/464 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G +  A+ V   MKE  L  +I T N ++  L   +  D    ++  +       +  
Sbjct: 424 KAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSR 483

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T   +IDGL ++ R+ DA    ++    +  P+VV   +++  + K G  E    ++  M
Sbjct: 484 TFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEM 543

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G  PD    N  +  +  AG +E+      ++   G+ PD  +YSIL  G       
Sbjct: 544 VHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFS 603

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
              +K+  ++  +G   D++ Y  +I G+C+ G V++  +L E M ++G +  V+ Y  +
Sbjct: 604 RETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSV 663

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  + K  R+DEA  L  E +++G+  ++V YS LI G  K  ++ +A  +  E+  K +
Sbjct: 664 VDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 723

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +PNS+    +L  L + E I EA++ F ++    C  + + Y+IMI+G   +    +A  
Sbjct: 724 TPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFV 783

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
            ++++ ++ + P+ +T+ ++I G  K G V +AR L D  K  G  P +  Y   +    
Sbjct: 784 FWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLS 843

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
                     + +E   K       T  V++  L K   L++A 
Sbjct: 844 SANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAA 887


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 283/582 (48%), Gaps = 4/582 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVSETPRN 62
           Y R       + V  ++    L   + +YN+L+         D   DL+  ++      N
Sbjct: 128 YRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPN 187

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T S +I+GLC+   +  A   L++  G    P+ ++ N ++  Y   G  + +  +F 
Sbjct: 188 VVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFK 247

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M    L PD  + N  +  LC  G ++EA +  + M   G +PD I+Y  L  G+    
Sbjct: 248 EMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAG 307

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            I+G   +   ++ +G  PD   +  LI  Y ++G +++ L + E M  QG   ++I +S
Sbjct: 308 CIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFS 367

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++S+ C+ GR+D+A+     M   G+ PD   YS LI+G C +  + KA +L ++M SK
Sbjct: 368 TVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSK 427

Query: 303 RISPNSFA-HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
            I P       +I+  LC++  + E +   D +I +    +++ +N ++DGY  +GN+ E
Sbjct: 428 GIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKE 487

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           AV L   +    + P I T+N+L+ G+CK+G++ DA  L   +    +  ++V+Y   ++
Sbjct: 488 AVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILH 547

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
              +         +  EM    +  +  TY  V+ GLC+     EA  LLE ++ + V  
Sbjct: 548 GLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKF 607

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D +T+N +IR+  K    ++A +L   +  + L PT  TY ++I  L      ++AD L 
Sbjct: 608 DILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLF 667

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            S+++ + +        II+    +G+V KA  +  ++ +KG
Sbjct: 668 SSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKG 709



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/616 (23%), Positives = 272/616 (44%), Gaps = 24/616 (3%)

Query: 47  MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMS 106
           ++   D     E    +YT +I+I+   +  R    +           GP V S NA++ 
Sbjct: 102 LFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALID 161

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
            + K G  + A  LF  M + G+ P+  +Y+ LI+GLC    M++A      M   GV P
Sbjct: 162 GFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRP 221

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD----PDIVTYTVLICGYCQIGNVEEG 222
           + +TY+ L  G+      SG WK   ++  + S     PD+      +   C+ G ++E 
Sbjct: 222 NNMTYNCLIHGY----STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEA 277

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
             + + M+ +G K +VI+Y  LL     +G I     L   M   G+ PD   ++ LI  
Sbjct: 278 RDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINA 337

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
             +   + K++ ++ +M  + ++P+      ++   C    + +A   F+ +I +    D
Sbjct: 338 YARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPD 397

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF-NSLIYGFCKNGKVADARRLL 401
             +Y+ +I G     ++ +A +L   ++ K I P  + F  S+I   CK G+VA+ + ++
Sbjct: 398 TAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVV 457

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           D I   G  P+ +T+ + ++ YC  GN++  + LL  ME+  + P   TY  ++ G CK 
Sbjct: 458 DLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKH 517

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++ +A+ L  DM    VT   ++YN I+    + +    A ++ ++M    +  +  TY
Sbjct: 518 GRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTY 577

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
             ++ GLC N     A+ LL  L   N+    + +  +I+A    G   +A   F  +  
Sbjct: 578 ATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAIST 637

Query: 582 KGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
            G   +I  Y                 + F  M  +   PD  I   ++      G++  
Sbjct: 638 YGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAK 697

Query: 627 VFELAAVMIKSGLLPD 642
                + + K G+LP+
Sbjct: 698 AGNYLSKIDKKGILPE 713



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 252/533 (47%), Gaps = 6/533 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNV 63
           +T  +  A  V+ +M    ++ +  TYN L++    T  MW     ++ ++  S    +V
Sbjct: 200 KTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGY-STSGMWKESVRVFKEMSSSLLVPDV 258

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
              +  +  LC+  R+++A         K   P V+S  A++  Y   G       LF +
Sbjct: 259 GNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNV 318

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G+ PD   +N LI+     G M+++L    DM + GV PD IT+S +   F  L +
Sbjct: 319 MVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGR 378

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY-S 242
           +  A +    ++  G  PD   Y+ LI G C   ++ +  +L   MLS+G     I + +
Sbjct: 379 LDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFT 438

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +++++CK GR+ E   ++  +   G +P+L+T++ L+ G C    + +A+ L + M S 
Sbjct: 439 SIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESV 498

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+ + +  ++ G C+   I +A   F  ++        V YNI++ G  +      A
Sbjct: 499 GVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVA 558

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +++ ++IE  ++ SI T+ +++ G C+N    +A  LL+ +    ++   +T+   + A
Sbjct: 559 KEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRA 618

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
             + G  Q    L   + T  + PT +TY V+I  L K+   ++A  L   M     TPD
Sbjct: 619 MFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPD 678

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
               N IIR      ++ KA   L+++    + P + T ++LI    VNG  +
Sbjct: 679 SRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYR 731



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 238/509 (46%), Gaps = 4/509 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRN 62
           YS +GM  ++V V  +M    L   +   NS +  L +H  I    D++D + +     +
Sbjct: 233 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 292

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V +   ++ G      +            +   P     N +++ Y +LG  + +  +F 
Sbjct: 293 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFE 352

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K G++PD  +++ +I   C  G +++A+E  N M   GV PD   YS L +G     
Sbjct: 353 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRR 412

Query: 183 QISGAWKVIQKLLIKGSDPDIVTY-TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +  A ++I  +L KG  P  + + T +I   C+ G V EG  + ++++  G + N+I +
Sbjct: 413 DLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITF 472

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C  G + EA+GLL  ME+VG++PD+ TY+ L+ G CK  ++  A+ L+ +M  
Sbjct: 473 NSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLH 532

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           KR++  S ++  IL GL +      A+  F  +I S     +  Y  ++ G  +     E
Sbjct: 533 KRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDE 592

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L  +L    +   I+TFN +I    K G+  +A+ L   I  +GL P+ +TY   + 
Sbjct: 593 ANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMIT 652

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
              +E + +    L   ME  +  P       +I+ L  + ++ +A   L  +   G+ P
Sbjct: 653 NLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILP 712

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           +  T + +I  F      R+  +LL + +
Sbjct: 713 EATTTSLLIYLFSVNGKYREYIKLLPEKY 741


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 244/499 (48%), Gaps = 6/499 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P + S   ++S   K+        L+  M   G+ PD  + NIL++ LC    + E L  
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              + R G  PD +TY+ L KG  +  +IS A  +  ++   G  P+ +TY  L+ G C+
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 216 IGNVEEGLKLREVMLSQG------FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
            GN+   LKL + ML+        FK  VI+YS+++ ++CK  R DEA  L  EM+  G+
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P +++Y+ LI G C   K  +A +L+NEM ++ + PN      ++  LC++  + EA+ 
Sbjct: 274 TPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 333

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             + +I    + +++ YN +I+G+  +G++  A +L+  +  K   P ++ +  LI G+C
Sbjct: 334 LLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYC 393

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K  KV +A +L + +   G  P   TY   +    + G +     L   M+   I     
Sbjct: 394 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLY 453

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            Y + + GLCK   L EA++L   +    +  D   +N +I   CK   L  A++L  ++
Sbjct: 454 IYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKL 513

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               L+P   TYNI+I   C  G +  A+ L   ++++  +  K+ Y T+I+       +
Sbjct: 514 PQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKL 573

Query: 570 HKAMTFFCQMVEKGFEISI 588
            K +     MV++   + +
Sbjct: 574 EKVVELLHMMVQRDVSLDV 592



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 158/536 (29%), Positives = 246/536 (45%), Gaps = 28/536 (5%)

Query: 109 CKLG--FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
           CK G   A  A   F LM+     P   S+  L+ GL       +     N M   G+ P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           D  T +IL      ++++     V+  +L +G  PDIVTYT LI G C    + +   L 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM------EAVGLKPDLVTYSILI 280
             M   G   N I Y  L+  +C++G I  AL L  EM        +  KP +++YSI+I
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
             LCK  +  +A  L+ EM  + ++P   ++ +++ G C      EA+  F+ ++     
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            +VV +N++ID   K G + EA  L   +I++ I P+++T+NSLI GFC  G +  AR L
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 369

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
             ++   G EP  + YT  +N YC+   ++  + L   M      P   TY  ++ GL +
Sbjct: 370 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 429

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             K+ +A +L   M V G+  D   Y   +   CK   L +A +L N++  +N++     
Sbjct: 430 GGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIEC 489

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           +N LIDGLC  G L+ A  L   L +  +    V Y  +I   C  G V KA   F Q +
Sbjct: 490 FNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILF-QKM 548

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           EK                   NG  PD+     ++  F +   L  V EL  +M++
Sbjct: 549 EK-------------------NGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 585



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/427 (30%), Positives = 217/427 (50%), Gaps = 6/427 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T + +I GLC + R+  A L           P+ ++   +M   C+ G   +A  L 
Sbjct: 165 DIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLH 224

Query: 122 CLMLK----YGLH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
             ML     YG++  P   SY+I+I  LC     +EA +   +M   G+ P  I+Y+ L 
Sbjct: 225 QEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLI 284

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            GF    +   A ++  +++ +G  P++VT+ VLI   C+ G V E   L EVM+ +G  
Sbjct: 285 HGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIV 344

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            N++ Y+ L+   C  G ++ A  L   M + G +PD++ Y++LI G CK  KV +A++L
Sbjct: 345 PNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKL 404

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           YN M      P+   +GA+L GL +   + +A+  F  + +     D+ +Y I ++G  K
Sbjct: 405 YNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCK 464

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G + EA++L+ +L    I   I  FN LI G CK GK+  A  L + +    L+P  VT
Sbjct: 465 NGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVT 524

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y   ++ +C  G + +   L Q+ME     P  +TY  +I+G  +  KL++ V+LL  M 
Sbjct: 525 YNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMV 584

Query: 476 VIGVTPD 482
              V+ D
Sbjct: 585 QRDVSLD 591



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 210/396 (53%), Gaps = 7/396 (1%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA------GKEFGPSVVSLNAIMSRY 108
           K+  TP N  T   ++ GLC+   +  A+   QE        G  F P V+S + I+   
Sbjct: 194 KLGCTP-NAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDAL 252

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK    + A+ LF  M   G+ P   SY  LIHG C  G  EEA    N+M   GV+P+ 
Sbjct: 253 CKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNV 312

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +T+++L        ++  A  +++ ++ +G  P+++TY  LI G+C +G++    +L   
Sbjct: 313 VTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVS 372

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M S+G + +VI Y+VL++  CK+ +++EA+ L   M  VG +PD+ TY  L+ GL +  K
Sbjct: 373 MPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 432

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V  A +L+  M    I  + + +G  L GLC+   + EA   F+ L   N   D+  +N 
Sbjct: 433 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 492

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDG  K G +  A +L+ +L ++ + P +VT+N +I+ FC+ G+V  A  L   ++ +G
Sbjct: 493 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
             P  +TY T +  + E   +++++ LL  M  + +
Sbjct: 553 CTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDV 588



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 170/334 (50%)

Query: 42  RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSL 101
           R  D   DL++++KV      V + + +I G C   + ++A     E   +   P+VV+ 
Sbjct: 256 RREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTF 315

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           N ++   CK G    AK L  +M++ G+ P+  +YN LI G C+ G +  A E    M  
Sbjct: 316 NVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPS 375

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            G EPD I Y++L  G+   S++  A K+   +L  G  PD+ TY  L+ G  Q G V +
Sbjct: 376 KGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGD 435

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
             KL  VM   G   ++  Y + L+ +CK+G + EA+ L  ++++  +K D+  ++ LI 
Sbjct: 436 AKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLID 495

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           GLCK  K+  A +L+ ++  + + P+   +  ++   C    + +A + F  +  + C  
Sbjct: 496 GLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTP 555

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
           D + Y  +I G+ +   + + V+L   ++++ +S
Sbjct: 556 DKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 589



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 187/405 (46%), Gaps = 28/405 (6%)

Query: 249 CKSGRID--EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           CK+G I   +A    + M      P L +++ L+ GL K     +   LYN+M    ISP
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +      +L  LC    + E       ++    I D+V Y  +I G      I +A  L+
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL----LDTIKLHGL--EPSAVTYTTFM 420
            ++ +   +P+ +T+ +L+ G C+ G ++ A +L    L+   L+G+  +P  ++Y+  +
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +A C++        L +EM+ + + PT ++YT +I G C   K +EA +L  +M   GV 
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ +T+N +I   CK   + +A  LL  M    + P   TYN LI+G C+ GDL +A  L
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 369

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
            VS+         + YT +I  +C    V +AM  +  M++ G    ++ Y         
Sbjct: 370 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYG-------- 421

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                        +L    QGG +G   +L  VM   G+  D ++
Sbjct: 422 ------------ALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYI 454


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 234/487 (48%), Gaps = 2/487 (0%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI--LIHGLCIAGSMEEALE 154
           S+V+ N+I+S   K G  E+    +  M+K G   DA +  +  LI   C +G +    E
Sbjct: 190 SIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYE 249

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
             N   + G++P   TY+ L  GF      +   +V+  ++ +   P I TY  +I G C
Sbjct: 250 LLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLC 309

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           +     E  ++   +  +G+  + + Y+ ++  +C+ G   EA  L +EM   G++P+  
Sbjct: 310 KNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAY 369

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+ ++ G  K     +A +LYNEMC+K     +     I+  LC +    EA   F  +
Sbjct: 370 TYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKM 429

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
             +    D + YN +I G+ K G + E + L  +L+ +   PS+  +  LI   CK+G  
Sbjct: 430 SETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDF 489

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
             A+RLL  +   GL P+A TY T ++   + G+ + +  L  E   K  G T  T   +
Sbjct: 490 EAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKI 549

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I  LC + K  EA ++ + M   G+  D ITYN++IR FCK   + K+  LLN++    L
Sbjct: 550 ISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGL 609

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
           +P++++Y  LI  LC NGD ++A  L   +    I         +I   C +G   + M 
Sbjct: 610 QPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMD 669

Query: 575 FFCQMVE 581
               M+E
Sbjct: 670 RLMGMLE 676



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/525 (23%), Positives = 245/525 (46%), Gaps = 7/525 (1%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTN 66
           G + +A+ V  ++KE  +++SI   NS+L        T+++++ Y ++  + T  +  T 
Sbjct: 170 GFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTE 229

Query: 67  SI--VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL-GFAEVAKGLFCL 123
           ++  +I   C   ++      L +       P   + N +++ +C+   +A +++ L  +
Sbjct: 230 TVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTM 289

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           + +  L P  ++Y  +I+GLC      EA    ND+   G  PD + Y+ +  G   +  
Sbjct: 290 IARNHL-PTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGS 348

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A K+  +++ KG  P+  TY  ++ G  + G+ E   +L   M ++G+    +  + 
Sbjct: 349 FGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNK 408

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++S +C  G+ DEA  +  +M   G++ D +TY+ LIRG CK+ KV + + L NE+ ++ 
Sbjct: 409 IISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQD 468

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+   +  +++  C+      A+     +       +   Y+ M+ G +K G+     
Sbjct: 469 PQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVR 528

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +LY +   K    +  T N +I   C  GK  +A  +   +   G++  A+TY + +  +
Sbjct: 529 ELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGF 588

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+EG + + + LL E+  + + P+  +Y  +I  LC+    + A +L  DM   G+ P  
Sbjct: 589 CKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHA 648

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
                +I   CK     +    L  M  + ++P  A +  L + L
Sbjct: 649 NLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAECL 693



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 227/516 (43%), Gaps = 22/516 (4%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  PD+ S    +  LC  G +EEA+E    +   G+    +  + +  G     +    
Sbjct: 151 GFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELL 210

Query: 188 WKVIQKLLIKGSDPDIVTYTV--LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
           ++  Q+++  G+  D  T TV  LI  +C  G V  G +L    L  G       Y+ L+
Sbjct: 211 FEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLI 270

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           +  C++        +L+ M A    P + TY  +I GLCK ++  +A +++N++  +  +
Sbjct: 271 AGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYA 330

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+   +  ++ GLCE     EAR  +  ++      +   YN M+ G +K G+   A +L
Sbjct: 331 PDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACEL 390

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           Y ++  K    + VT N +I   C  GK  +A  +   +   G++  A+TY + +  +C+
Sbjct: 391 YNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCK 450

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           EG +   + LL E+  +   P+   Y ++I   CK    + A +LL DM   G+ P+  T
Sbjct: 451 EGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYT 510

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           Y+T++    K  D     +L N+        T+AT N +I  LC  G    A  +   + 
Sbjct: 511 YDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMS 570

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
           E  I    + Y ++I+  C EG V K+M    ++V +G + S   Y              
Sbjct: 571 ETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYAS------------ 618

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                   ++I   Q GD  S   L   M+  G+ P
Sbjct: 619 --------LIIQLCQNGDAESAKRLWGDMVSKGIEP 646



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 223/497 (44%), Gaps = 20/497 (4%)

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
           H   PD I+ ++L +   L ++   A K+++   I G  PD  +    +   C +G +EE
Sbjct: 118 HDCTPDPISSNMLFEAL-LDAKAVRAAKMVRD--IAGFIPDSASLEQYVKCLCGVGFIEE 174

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI--L 279
            +++   +   G +++++A + +LS   K+G+ +       EM   G   D  T ++  L
Sbjct: 175 AIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCL 234

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I+  C   +V +  +L N+     + P +  +  ++ G C+ +          ++I  N 
Sbjct: 235 IQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNH 294

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           +  +  Y  +I+G  K     EA +++  L ++  +P  V + ++I+G C+ G   +AR+
Sbjct: 295 LPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARK 354

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L   +   G++P+A TY T ++   + G+ +R   L  EM  K  G T VT   +I  LC
Sbjct: 355 LWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELC 414

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
            + K  EA ++ + M   G+  D ITYN++IR FCK   + +   LLN++   + +P+ +
Sbjct: 415 SRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVS 474

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            Y +LI   C +GD + A  LL  +    +      Y T++      GD       + + 
Sbjct: 475 LYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNET 534

Query: 580 VEKGF------------EISIR---DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
             KG+            E+  R   D     F  M   G   D      ++  F + G +
Sbjct: 535 CNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKV 594

Query: 625 GSVFELAAVMIKSGLLP 641
           G    L   ++  GL P
Sbjct: 595 GKSMNLLNELVAQGLQP 611



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 123/279 (44%), Gaps = 35/279 (12%)

Query: 44  TDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNA 103
           +D  ++++  +  +    +  T + +I G C++ ++ + +  L E   ++  PSV     
Sbjct: 419 SDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYEL 478

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG--------------------- 142
           ++ + CK G  E AK L   M   GLHP+A++Y+ ++HG                     
Sbjct: 479 LIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKG 538

Query: 143 --------------LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
                         LC  G  +EA E    M   G++ DAITY+ L +GF    ++  + 
Sbjct: 539 YGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSM 598

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            ++ +L+ +G  P   +Y  LI   CQ G+ E   +L   M+S+G + +      L+S +
Sbjct: 599 NLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGL 658

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
           CK GR  E +  L  M    +KP    +  L   L + +
Sbjct: 659 CKQGRATEGMDRLMGMLENKIKPKKAAFEDLAECLIQSE 697


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 241/482 (50%), Gaps = 5/482 (1%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           +YD+++      NV+T ++++  LCQ +R+  A   L E A K   P  V+   I+S  C
Sbjct: 150 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 209

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           KL   + A  +   M      P A SYN ++  LC    M+E     +DM   G++P+ I
Sbjct: 210 KLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVI 264

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           TY+ +   F    ++  A  ++ +++I G  P++VT+T L+ G    G V + L +   M
Sbjct: 265 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 324

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           +++G+  + ++Y++L+  +C  G +  A  +L  ME  G  P++ TYS LI G  K   +
Sbjct: 325 VAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDL 384

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             AI ++N+M      PN   +  ++   C+K M  +A+   D +++ NC  + V +N +
Sbjct: 385 GGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTL 444

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           I        +G A+ ++ ++      P+  T+N LI+G  + G   DA  ++  ++ HG+
Sbjct: 445 IRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGI 504

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           E S VTY T ++  C+    +  +  + +M  + I P   T++ +I   CK+ +++ A  
Sbjct: 505 ELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAW 564

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +L  M V+    + + Y  ++   C    L  A   L +M    + P + T+N+L+ G+ 
Sbjct: 565 MLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVF 624

Query: 530 VN 531
            N
Sbjct: 625 RN 626



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 247/486 (50%), Gaps = 12/486 (2%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M K G+HP+ F+YN+L+  LC    +  A +  ++M R G  PD +TY+ +      L +
Sbjct: 154 MRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDR 213

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A +V+  +      P   +Y  ++   C+   ++E   +   M+ +G + NVI Y+ 
Sbjct: 214 LDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTT 268

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ + CK+G +  A  +L  M   G  P++VT++ L+RGL    +VH A+ ++  M ++ 
Sbjct: 269 IVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEG 328

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +P++ ++  ++ GLC    +  A    +S+    C  +V  Y+ +IDG+ K G++G A+
Sbjct: 329 WAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAI 388

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            ++  +      P++V + +++  FCK      A+ L+D + L    P+ VT+ T + + 
Sbjct: 389 SIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSL 448

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+   + R L +  EM      P   TY  +I GL ++    +A+ ++ +M   G+    
Sbjct: 449 CDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSL 508

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TYNT++   C+ +  R+A   + +M +  ++P + T++ +I   C  G+++ A  +L +
Sbjct: 509 VTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGA 568

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTKSFF 596
           +   N     + YT ++   C +  +  AMT+  +M+ +G       + + +R   ++  
Sbjct: 569 MNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLG 628

Query: 597 CMMLSN 602
           C+  S+
Sbjct: 629 CIEPSD 634



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 168/353 (47%), Gaps = 5/353 (1%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+ ++ +   +   + +   M   G+ P++ TY++L+R LC+ ++V  A ++ +EM 
Sbjct: 131 YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA 190

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K   P+   +  I+  LC+ + + EA     + +++        YN ++    +   + 
Sbjct: 191 RKGCPPDDVTYATIVSVLCKLDRLDEA-----TEVLAAMPPVAASYNAIVLALCREFRMQ 245

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           E   +   ++ + + P+++T+ +++  FCK G++  A  +L  + + G  P+ VT+T  +
Sbjct: 246 EVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALV 305

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
               ++G +   L + + M  +   P+ V+Y ++I+GLC    L+ A  +L  M   G  
Sbjct: 306 RGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCF 365

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+  TY+T+I  F K  DL  A  + N M     +P    Y  ++D  C       A  L
Sbjct: 366 PNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSL 425

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           +  +   N     V + T+I++ C    V +A+  F +M   G   + R Y +
Sbjct: 426 IDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNE 478



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 155/353 (43%), Gaps = 55/353 (15%)

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           LYN +ID  ++   +G  V +Y  + +  + P++ T+N L+   C+N +V  AR++LD +
Sbjct: 130 LYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEM 189

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G  P  VTY T ++  C+   +     +L  M      P   +Y  ++  LC+++++
Sbjct: 190 ARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRM 244

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM--------------- 509
           QE   ++ DM   G+ P+ ITY TI+ +FCK  +LR A  +L +M               
Sbjct: 245 QEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTAL 304

Query: 510 ------------------WL--HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
                             W+      P++ +YNILI GLC  GDLK A  +L S+++H  
Sbjct: 305 VRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGC 364

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KS 594
                 Y+T+I      GD+  A++ +  M   G + ++  YT               KS
Sbjct: 365 FPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKS 424

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               ML    PP+      ++ +      +G    +   M + G +P+    N
Sbjct: 425 LIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYN 477



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 32/170 (18%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           R G   DA+ ++ +M+   +++S+ TYN+                               
Sbjct: 485 REGNCGDALHMVTEMQSHGIELSLVTYNT------------------------------- 513

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
            V+ GLCQ    ++A++F+ +   +   P+  + +AI+  YCK G   +A  +   M   
Sbjct: 514 -VVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVV 572

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             H +   Y IL+  LC    + +A+ +   M   G+ P+ +T+++L +G
Sbjct: 573 NCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRG 622


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 154/572 (26%), Positives = 270/572 (47%), Gaps = 34/572 (5%)

Query: 35  NSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAG 91
           N+LL  L   +  +I   +Y+++   +   + Y+  I++ GLC++ ++++    + +  G
Sbjct: 174 NALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWG 233

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           K   P++V  N ++  Y K G  E A GLF  +   G  P   +Y I+I+GLC   + + 
Sbjct: 234 KGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKA 293

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV-----IQKLLIKGSDPDIVTY 206
                 +M   GV+ +   Y+ +       +QI    K+     ++ +   G +PDI TY
Sbjct: 294 VDGLLVEMKERGVDVNVQVYNSIVD-----AQIKHGCKIEVGKTLRWITENGCEPDITTY 348

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             LI G C+ G V E  +L E  + +G   N ++Y+ L+   CK G+   A  L   M  
Sbjct: 349 NTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTE 408

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G   DLV Y  L+ GL    +V  A+ + ++M  + + P++  +  ++ GLC+K  ++ 
Sbjct: 409 KGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSA 468

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A++    ++  N   D  +   ++DG+++ G + EA +L+   I K + P +V +N++I 
Sbjct: 469 AKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIK 528

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G+CK G + DA   +  +K     P   TY+T ++ Y ++ ++   L L  +M  +   P
Sbjct: 529 GYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKP 588

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             VTYT +I G C+      A +  E+M   G+ P+ +TY  +I  FCK   + KA    
Sbjct: 589 NVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFF 648

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
             M L+   P   T+N LI+GL  N        L  ++        K   +  IKA    
Sbjct: 649 ELMLLNRCIPNDVTFNYLINGLTNN--------LATAVS------NKANESLEIKASL-- 692

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
                 M FF  M+  G+E  +  Y     C+
Sbjct: 693 -----MMDFFRTMISDGWEQRVAAYNSVLICL 719



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 149/576 (25%), Positives = 254/576 (44%), Gaps = 29/576 (5%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V++ NA+++   +    E+A+ ++  M+K     D +S  I++ GLC    +EE  + 
Sbjct: 168 PDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKL 227

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            ND    G  P+ + Y+ L  G+     +  A  + ++L +KG  P   TY ++I G C+
Sbjct: 228 INDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCK 287

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
             N +    L   M  +G  +NV  Y+ ++ +  K G   E    L  +   G +PD+ T
Sbjct: 288 KCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITT 347

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G C+  KVH+A +L      + +SPN  ++  ++   C++     A   F  + 
Sbjct: 348 YNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMT 407

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D+V Y  ++ G V  G +  A+ +  +++E+ + P    +N L+ G CK G+++
Sbjct: 408 EKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLS 467

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A+ LL  +    L   A    T ++ +   G +     L +    K + P  V Y  +I
Sbjct: 468 AAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMI 527

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           KG CK   + +A+  ++ M     +PD+ TY+TII  + K  DL  A +L  QM     +
Sbjct: 528 KGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCK 587

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TY  LI+G C  GD   A+     ++   +    V YT +I   C EG + KA +F
Sbjct: 588 PNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSF 647

Query: 576 F-------CQMVEKGFEISIRDYTKS----------------------FFCMMLSNGFPP 606
           F       C   +  F   I   T +                      FF  M+S+G+  
Sbjct: 648 FELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQ 707

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                  +LI       + +  +L   M   G+ PD
Sbjct: 708 RVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPD 743



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 232/495 (46%), Gaps = 36/495 (7%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR---------NVYTNSI 68
           ++ +MKE  + V++Q YNS++      D        I+V +T R         ++ T + 
Sbjct: 297 LLVEMKERGVDVNVQVYNSIV------DAQIKHGCKIEVGKTLRWITENGCEPDITTYNT 350

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I G C+  ++ +A   L+    +   P+ +S   ++  YCK G    A  LF  M + G
Sbjct: 351 LISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKG 410

Query: 129 LHP-DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            HP D  +Y  L+HGL  AG ++ AL   + M   GV PDA  Y++L  G     ++S A
Sbjct: 411 -HPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAA 469

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             ++ ++L +    D      L+ G+ + G ++E  KL E+ +++G    V+ Y+ ++  
Sbjct: 470 KLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKG 529

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            CK G +++AL  +  M+     PD  TYS +I G  KQ+ +H A++L+ +M  ++  PN
Sbjct: 530 YCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPN 589

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              + +++ G C     + A   F+ +  S    +VV Y I+I  + K G I +A   + 
Sbjct: 590 VVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFE 649

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH--------------GLEPSA 413
            ++  R  P+ VTFN LI G   N   A + +  +++++               G E   
Sbjct: 650 LMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRV 709

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC-----KQWKLQEAV 468
             Y + +   C    +   L L  +M  K I P  V++  ++ GLC     K+WK   + 
Sbjct: 710 AAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTISC 769

Query: 469 QLLEDMYVIGVTPDQ 483
           +L E    I V   Q
Sbjct: 770 KLNEWELQIAVKYSQ 784



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/458 (23%), Positives = 196/458 (42%), Gaps = 16/458 (3%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLS-QGFKLNVIAYSVLLSSMCKSGRIDEALG 259
           P     + ++  Y   G V   L+L  +      +  +VIA + LL+++ +  +++ A  
Sbjct: 132 PTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARK 191

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           +  EM       D  +  I++RGLCK+ KV +  +L N+   K   PN   +  ++ G  
Sbjct: 192 VYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYW 251

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           ++  +  A   F  L M   +     Y IMI+G  K  N      L  ++ E+ +  ++ 
Sbjct: 252 KRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQ 311

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
            +NS++    K+G   +  + L  I  +G EP   TY T ++  C +G +     LL+  
Sbjct: 312 VYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHA 371

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
             + + P  ++YT +I   CKQ K   A  L   M   G   D + Y  ++       ++
Sbjct: 372 IKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEV 431

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
             A  + ++M    + P +  YN+L++GLC  G L  A  LLV +   N+SL      T+
Sbjct: 432 DVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATL 491

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF-----FCMM---------LSNG-F 604
           +      G + +A   F   + KG +  +  Y         F MM         + +G  
Sbjct: 492 VDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDH 551

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            PD+     ++  + +  DL +  +L   M+K    P+
Sbjct: 552 SPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPN 589



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 170/371 (45%), Gaps = 22/371 (5%)

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA-RMYFDSLIMSNCIQDVVLYNIMIDG 352
            L   M  K ++P   A   ++    +  ++  A  +Y  +  + N + DV+  N +++ 
Sbjct: 120 NLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNA 179

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
            ++   +  A ++Y +++++       +   ++ G CK  KV + R+L++     G  P+
Sbjct: 180 LIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPN 239

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            V Y T ++ Y + G+++R   L +E++ K   PT  TY ++I GLCK+   +    LL 
Sbjct: 240 IVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLV 299

Query: 473 DMYVIGVTPDQITYNTIIRSFCK--CK-DLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +M   GV  +   YN+I+ +  K  CK ++ K  + + +   +  EP   TYN LI G C
Sbjct: 300 EMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITE---NGCEPDITTYNTLISGSC 356

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            +G +  A+ LL    +  +S  K++YT +I  +C +G   +A   F  M EKG  + + 
Sbjct: 357 RDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLV 416

Query: 590 DYTKSFFCM---------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
            Y      +               M+  G  PD  +  V++    + G L +   L   M
Sbjct: 417 AYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEM 476

Query: 635 IKSGLLPDKFL 645
           +   L  D F+
Sbjct: 477 LHQNLSLDAFV 487



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 126/309 (40%), Gaps = 65/309 (21%)

Query: 381 FNSLIYGF---------CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           FN L+ GF          +     +   LL+T+K   L P+    +  + AY + G + R
Sbjct: 93  FNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNR 152

Query: 432 LL------------------------ALLQ------------EMETKAIGPTHVTYTVVI 455
            L                        AL+Q            EM  +     + +  +++
Sbjct: 153 ALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMV 212

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           +GLCK+ K++E  +L+ D +  G  P+ + YNT++  + K  D+ +A  L  ++ +    
Sbjct: 213 RGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFL 272

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           PT+ TY I+I+GLC   + K  D LLV ++E  + +    Y +I+ A    G        
Sbjct: 273 PTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHG-------- 324

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
            C+ +E G  +            +  NG  PD      ++    + G +    EL    I
Sbjct: 325 -CK-IEVGKTLR----------WITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAI 372

Query: 636 KSGLLPDKF 644
           K GL P+K 
Sbjct: 373 KRGLSPNKL 381



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 127/281 (45%), Gaps = 57/281 (20%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y + GM++DA+  + +MK+ D                                +P + +T
Sbjct: 530 YCKFGMMNDALTCVQRMKDGD-------------------------------HSP-DEFT 557

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            S +IDG  +Q+ L +A+    +   ++  P+VV+  ++++ +C+ G +  A+  F  M 
Sbjct: 558 YSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMR 617

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF--HLLSQ 183
             GL P+  +Y ILI   C  G + +A  F   M  +   P+ +T++ L  G   +L + 
Sbjct: 618 SSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATA 677

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +S   K  + L IK S         L+  + +             M+S G++  V AY+ 
Sbjct: 678 VSN--KANESLEIKAS---------LMMDFFR------------TMISDGWEQRVAAYNS 714

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           +L  +C    ++ AL L  +M   G+ PD V+++ L+ GLC
Sbjct: 715 VLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLC 755


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 239/457 (52%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L DAI      A     PS++  + ++S   K+   ++       M   G+  + ++YNI
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI+  C    +  AL     M + G EPD +T + L  GF   ++IS A  ++ +++  G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD VT+T LI G        E + L + M+ +G + +++ Y  +++ +CK G  D AL
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            LL +MEA  ++ ++V YS +I  LCK      A+ L+ EM +K + PN   + +++  L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C     ++A      +I      ++V ++ +ID +VK G + +A +LY ++I++ I P+I
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            T++SLI GFC   ++ +A+++L+ +      P+ VTY T +N +C+   + + + L +E
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M  + +    VTYT +I G  +      A  + + M  +GV P+ +TYN ++   CK   
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
           L KA  +   +    +EP   TYNI+I+G+C  G  K
Sbjct: 479 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 247/466 (53%), Gaps = 9/466 (1%)

Query: 8   RTGM----VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETP 60
           RTG+    + DA+ +   M +     SI  ++ LL     +   D++    + +++    
Sbjct: 51  RTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGIS 110

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N+YT +I+I+  C+ SRL  A+  L +     + P +V+LN++++ +C       A  L
Sbjct: 111 HNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVAL 170

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M++ G  PD  ++  LIHGL +     EA+   + M + G +PD +TY  +  G   
Sbjct: 171 VDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCK 230

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
                 A  ++ K+     + ++V Y+ +I   C+  + ++ L L   M ++G + NVI 
Sbjct: 231 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS L+S +C  GR  +A  LL +M    + P+LVT+S LI    K+ K+ KA +LY EM 
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            + I PN F + +++ G C  + + EA+   + +I  +C+ +VV YN +I+G+ K   + 
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           + ++L+R++ ++ +  + VT+ +LI+GF +     +A+ +   +   G+ P+ +TY   +
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK--QWKL 464
           +  C+ G + + + + + ++   + P   TY ++I+G+CK  +WK+
Sbjct: 471 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKM 516



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 226/460 (49%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A GLF +M +    P    ++ L+  +      +  + F   M   G+  +  TY+IL  
Sbjct: 62  AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F   S++S A  ++ K++  G +PDIVT   L+ G+C    + + + L + M+  G+K 
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + + ++ L+  +    +  EA+ L+  M   G +PDLVTY  ++ GLCK+     A+ L 
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           N+M + +I  N   +  ++  LC+     +A   F  +       +V+ Y+ +I      
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   +A +L   +IE++I+P++VTF++LI  F K GK+  A +L + +    ++P+  TY
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           ++ +N +C    +     +L+ M  K   P  VTY  +I G CK  ++ + ++L  +M  
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+  + +TY T+I  F + +D   A  +  QM    + P   TYNIL+DGLC NG L  
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           A  +   LQ   +      Y  +I+  C  G       +F
Sbjct: 482 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 200/426 (46%), Gaps = 15/426 (3%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           ++I +S LLS++ K  + D  +    +ME +G+  +L TY+ILI   C+  ++  A+ L 
Sbjct: 77  SIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALL 136

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M      P+     ++L G C    I++A    D ++      D V +  +I G    
Sbjct: 137 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
               EAV L  +++++   P +VT+ +++ G CK G    A  LL+ ++   +E + V Y
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           +T +++ C+  +    L L  EME K + P  +TY+ +I  LC   +  +A +LL DM  
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             + P+ +T++ +I +F K   L KA +L  +M   +++P   TY+ LI+G C+   L  
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG------------- 583
           A  +L  +   +     V Y T+I   C    V K M  F +M ++G             
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436

Query: 584 --FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
             F+    D  +  F  M+S G  P+     ++L    + G L     +   + +S + P
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496

Query: 642 DKFLIN 647
           D +  N
Sbjct: 497 DIYTYN 502



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 171/321 (53%), Gaps = 3/321 (0%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           +AV +I +M +   +  + TY +++  L     TD+  +L + ++ ++   NV   S VI
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           D LC+     DA+    E   K   P+V++ ++++S  C  G    A  L   M++  ++
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+  +++ LI      G + +A +   +M +  ++P+  TYS L  GF +L ++  A ++
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++ ++ K   P++VTY  LI G+C+   V++G++L   M  +G   N + Y+ L+    +
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           +   D A  +  +M +VG+ P+++TY+IL+ GLCK  K+ KA+ ++  +    + P+ + 
Sbjct: 441 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 500

Query: 311 HGAILLGLCEKEMITEARMYF 331
           +  ++ G+C+        +YF
Sbjct: 501 YNIMIEGMCKAGKWKMGGIYF 521



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 157/348 (45%), Gaps = 37/348 (10%)

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +D+A+GL   M      P ++ +S L+  + K +K    I              SF    
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVI--------------SFGEKM 104

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
            +LG+                       ++  YNI+I+ + +   +  A+ L  ++++  
Sbjct: 105 EILGIS---------------------HNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
             P IVT NSL+ GFC   +++DA  L+D +   G +P  VT+TT ++           +
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           AL+  M  +   P  VTY  V+ GLCK+     A+ LL  M    +  + + Y+T+I S 
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           CK +    A  L  +M    + P   TY+ LI  LC  G   +A  LL  + E  I+   
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCMM 599
           V ++ +I A   +G + KA   + +M+++  + +I  Y+   + FCM+
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCML 371


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 265/543 (48%), Gaps = 16/543 (2%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL-------- 111
           P NV + ++VI+GL ++  +  A     E  G+ F P++V+ N+++   CK         
Sbjct: 136 PPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEA 195

Query: 112 --------GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
                   G  E A  L   M   GL PD  +Y++LI   C  G   EA    + M R G
Sbjct: 196 VLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRG 255

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
             PDA TY  L  G+     +     ++  ++  G   +   + +LI  Y +   +++ +
Sbjct: 256 QNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAM 315

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
                M  +GF  NV+ Y+ ++  +CK+GR+++A+    +M + GL PD++T++ LI GL
Sbjct: 316 TAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGL 375

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           C   +  K  +L  EM ++ I PN+     I+  LC++  + EA  +FD +I      DV
Sbjct: 376 CTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDV 435

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V Y I+IDGY   G + E+++L  +++   + P  VT+++L+ G+CKNG+V DA  L   
Sbjct: 436 VSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYRE 495

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +    ++P+A+TY   ++     G +        ++    I     TY +V+ GLC+   
Sbjct: 496 MFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSF 555

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           + EA+++ + +       +  T+N +I    K   +  A  L + +    L P +  Y +
Sbjct: 556 VDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGL 615

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +I      G L+ +D L +S++++  +        I++    +GDV +A T+  ++ EK 
Sbjct: 616 MIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKE 675

Query: 584 FEI 586
           + +
Sbjct: 676 YSV 678



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 160/620 (25%), Positives = 277/620 (44%), Gaps = 51/620 (8%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIM-------SRYCKLGFAEVAKGLFCLMLKYG--- 128
           L+DA+    E   +    SV + N ++       S   +   A +A  LF  M + G   
Sbjct: 30  LEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNK 89

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE----------PDAITYSILAKGF 178
           L  DA ++ ILI   C  G ++ ALE  +   R  V           P+ ++Y+++  G 
Sbjct: 90  LATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGL 149

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI----------------GNVEEG 222
               ++  A+ +  ++L +G  P+IVTY  +I G C+                 G +EE 
Sbjct: 150 FKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEA 209

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           ++L + M   G + +V+ YS+L+   CK GR  EA  +   M   G  PD  TY  L+ G
Sbjct: 210 VRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHG 269

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
              +  +     L   M    I         ++    + E + +A   F  +       +
Sbjct: 270 YATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPN 329

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           VV Y  +ID   K G + +AV  + Q++ + +SP I+TF SLI+G C  G+     +L  
Sbjct: 330 VVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSF 389

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G+ P+A+   T M++ C+EG +        ++    + P  V+YT++I G C   
Sbjct: 390 EMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDG 449

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           K+ E+++LL  M  IG+ PD +TY+ ++  +CK   +  A  L  +M+  +++P + TYN
Sbjct: 450 KMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYN 509

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           I++ GL   G +  A    + + +  I L    Y  ++   C    V +A+  F  +  K
Sbjct: 510 IILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSK 569

Query: 583 GFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
            F++ +R +                KS F  +L +G  PD  I  +M+ +  + G L   
Sbjct: 570 EFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEES 629

Query: 628 FELAAVMIKSGLLPDKFLIN 647
            EL   M K+G   +   +N
Sbjct: 630 DELFLSMEKNGCTANSRTLN 649



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/550 (24%), Positives = 260/550 (47%), Gaps = 54/550 (9%)

Query: 30  SIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQ----------- 75
           ++ +YN +   L+     D  + L+ ++     P N+ T + VIDGLC+           
Sbjct: 138 NVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVL 197

Query: 76  -----QSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
                + +L++A+  L++ +G    P VV+ + ++  YCK+G    A+ +F  M++ G +
Sbjct: 198 QQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQN 257

Query: 131 PDAFSYNILIHGLCIAG-----------------------------------SMEEALEF 155
           PDA++Y  L+HG    G                                   ++++A+  
Sbjct: 258 PDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTA 317

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M + G  P+ +TY+ +        ++  A     +++ +G  PDI+T+T LI G C 
Sbjct: 318 FIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCT 377

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           IG  ++  KL   M+++G   N I  + ++ S+CK GR+ EA     ++  VG+KPD+V+
Sbjct: 378 IGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVS 437

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ILI G C   K+ ++I+L   M S  + P++  + A+L G C+   + +A   +  + 
Sbjct: 438 YTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMF 497

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
             +   + + YNI++ G    G +  A + Y ++++  I   I T+N ++ G C+N  V 
Sbjct: 498 SKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVD 557

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A R+   ++    +    T+   +    + G I    +L   +    + P  + Y ++I
Sbjct: 558 EALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMI 617

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           +   ++  L+E+ +L   M   G T +  T N I+R   +  D+R+A   L ++      
Sbjct: 618 QSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYS 677

Query: 516 PTSATYNILI 525
             ++T  +LI
Sbjct: 678 VEASTAVLLI 687


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 154/578 (26%), Positives = 279/578 (48%), Gaps = 5/578 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDIKVSETPRNVYTN 66
           G +     V+ KM++    ++  +YN L++ L  +       ++Y  +       ++ T 
Sbjct: 171 GGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTY 230

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S ++  L ++   +  ++ L+E       P+V +    +    + G  + A  +F  M  
Sbjct: 231 SALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDD 290

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD  +Y +LI  LC AG +E A E    M  +G +PD + Y  L   F+    +  
Sbjct: 291 EGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT 350

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
             +   ++   G  PD+VT+T+L+   C+  + +E     +VM  QG   N+  Y+ L+ 
Sbjct: 351 FKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLIC 410

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            + ++GRI++AL LL  ME+VG++P   TY   I    K  +  KA++ + +M +K I P
Sbjct: 411 GLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVP 470

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N  A  A L  L E   + EA+  F+ L  +    D V YN+M+  Y K+G + EAV L 
Sbjct: 471 NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLL 530

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++I     P ++  NSLI    K G+V +A ++ D +K   L P+ VTY T ++   +E
Sbjct: 531 SEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKE 590

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +Q+ + L + M  K   P  +++  ++   CK  +++ A+++   M V+   PD +TY
Sbjct: 591 GRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTY 650

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS-LQ 545
           NT+I    K   +  AF   +Q+   ++ P   T   L+ GL   G + +A  +    + 
Sbjct: 651 NTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMY 709

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +    + +  +  ++     E ++ KA+ F  ++V  G
Sbjct: 710 QVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNG 747



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/553 (25%), Positives = 256/553 (46%), Gaps = 3/553 (0%)

Query: 30  SIQTYNSLLYNLRHTDIMWDL---YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           + +T N +L  LR  D + D+   ++ ++     R++ T   +   L  +  L+     L
Sbjct: 121 TTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVL 180

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            +     F  +  S N ++    + GF   A  ++  M+  GL P   +Y+ L+  L   
Sbjct: 181 NKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKK 240

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
              E  +    +M   G+ P+  T++I  +      +I  A+++ +++  +G  PD+VTY
Sbjct: 241 RDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTY 300

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           TVLI   C  G +E   +L   M + G K + + Y  LL      G +D       +MEA
Sbjct: 301 TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEA 360

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G  PD+VT++IL+  LCK     +A   ++ M  + I PN   +  ++ GL     I +
Sbjct: 361 DGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIED 420

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A    D++           Y   ID + K G  G+AV+ + ++  K I P+IV  N+ +Y
Sbjct: 421 ALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLY 480

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
              + G++ +A+ + + ++ +GL P +VTY   M  Y + G +   + LL EM      P
Sbjct: 481 SLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             +    +I  L K  ++ EA Q+ + M  + ++P  +TYNT++    K   ++KA +L 
Sbjct: 541 DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
             M      P + ++N L+D  C N +++ A  +   +   +     + Y T+I     E
Sbjct: 601 ESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 567 GDVHKAMTFFCQM 579
             V+ A  FF Q+
Sbjct: 661 NKVNHAFWFFHQL 673



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 182/789 (23%), Positives = 313/789 (39%), Gaps = 159/789 (20%)

Query: 18   VIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
            ++ +M++L L+ ++ T+     +L      D  ++++  +       ++ T +++ID LC
Sbjct: 249  LLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALC 308

Query: 75   QQSRLQDAI-LFLQETAG-------------------------KEFG---------PSVV 99
               +L++A  LF++  A                          KEF          P VV
Sbjct: 309  NAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVV 368

Query: 100  SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
            +   ++   CK    + A   F +M K G+ P+  +YN LI GL  AG +E+AL+  + M
Sbjct: 369  TFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTM 428

Query: 160  GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-------------------- 199
               GV+P A TY      F    +   A +  +K+  KG                     
Sbjct: 429  ESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRL 488

Query: 200  ---------------DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
                            PD VTY +++  Y ++G V+E + L   M+  G + +VI  + L
Sbjct: 489  REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSL 548

Query: 245  LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
            + S+ K+GR+DEA  +   M+ + L P +VTY+ L+ GL K+ +V KAI+L+  M  K+ 
Sbjct: 549  IDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKC 608

Query: 305  SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI-------------- 350
            SPN+ +   +L   C+ + +  A   F  + + +C  DV+ YN +I              
Sbjct: 609  SPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFW 668

Query: 351  --------------------DGYVKLGNIGEAVQLYRQ---------------------L 369
                                 G VK G IG+A+ + R                      L
Sbjct: 669  FFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTL 728

Query: 370  IEKRISPSIVTFNSLIYG---------------FCKNGKVADARRLLDTI-KLHGLEPSA 413
            +E  +  +I+    L+                  CK+ +   A ++ D   K  G+ P+ 
Sbjct: 729  VEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTL 788

Query: 414  VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
             +Y   +    E    ++   L ++M+     P   T+ +++    K  K+ E  +L ++
Sbjct: 789  ASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKE 848

Query: 474  MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
            M      PD ITYN +I S  K  +L KA      +   +  PT  TY  LIDGL   G 
Sbjct: 849  MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908

Query: 534  LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
            L+ A  L   + ++        +  +I  +   GD   A   F +MV +G    ++ YT 
Sbjct: 909  LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968

Query: 594  SFFCMML---------------SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
               C+ L               S G  PD      ++    +   +     L   M   G
Sbjct: 969  LVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028

Query: 639  LLPDKFLIN 647
            ++PD +  N
Sbjct: 1029 IVPDLYTYN 1037



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 148/604 (24%), Positives = 271/604 (44%), Gaps = 18/604 (2%)

Query: 1    MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVS 57
            M+   YS+ G V +AV ++++M     +  +   NSL   LY     D  W ++D +K  
Sbjct: 512  MMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDM 571

Query: 58   ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            +    V T + ++ GL ++ R+Q AI   +    K+  P+ +S N ++  +CK    E+A
Sbjct: 572  KLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELA 631

Query: 118  KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              +F  M      PD  +YN +I+GL     +  A  F + + +  + PD +T   L  G
Sbjct: 632  LKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPG 690

Query: 178  FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI--GNVEEGLKLREVMLSQGFK 235
                 QI  A  + +  + +      V + V    +  +  G + E    + ++ ++   
Sbjct: 691  LVKCGQIGDAISIARDFMYQ------VRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELV 744

Query: 236  LNVIAYS-----VLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKV 289
            LN I         L+  +CK  R   A  +  +  + +G+ P L +Y+ LI  L +    
Sbjct: 745  LNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYT 804

Query: 290  HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             KA  L+ +M +   +P++F    +L    +   ITE    +  +I   C  D + YNI+
Sbjct: 805  EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIV 864

Query: 350  IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
            I    K  N+ +A+  +  L+     P+  T+  LI G  K G++ +A RL + +  +G 
Sbjct: 865  ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924

Query: 410  EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            +P+   +   +N Y + G+ +    L + M  + I P   +YT+++  LC   ++ EA+ 
Sbjct: 925  KPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALY 984

Query: 470  LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
               ++   G+ PD I YN II    K + + +A  L N+M    + P   TYN L+  L 
Sbjct: 985  YFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLG 1044

Query: 530  VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            + G ++ A  +   LQ   +      Y  +I+ +    +   A T +  M+  G   +I 
Sbjct: 1045 LAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIG 1104

Query: 590  DYTK 593
             Y +
Sbjct: 1105 TYAQ 1108



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 240/505 (47%), Gaps = 43/505 (8%)

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           E    +F  M K  +  D  +Y  +   L I G + +     N M + G   +A +Y+ L
Sbjct: 139 EDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGL 198

Query: 175 AKGFHLLSQISG----AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
               HLL Q SG    A +V ++++ +G  P + TY+ L+    +  + E  + L + M 
Sbjct: 199 ---IHLLIQ-SGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEME 254

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
             G + NV  +++ +  + ++G+IDEA  +   M+  G  PDLVTY++LI  LC   ++ 
Sbjct: 255 DLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLE 314

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A +L+ +M +    P+   +  +L    +   +   + ++  +     + DVV + I++
Sbjct: 315 NAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILV 374

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           D   K  +  EA   +  + ++ I P++ T+N+LI G  + G++ DA +LLDT++  G++
Sbjct: 375 DVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQ 434

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI-------------------------- 444
           P+A TY TF++ + + G   + +   ++M+ K I                          
Sbjct: 435 PTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTM 494

Query: 445 ---------GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
                     P  VTY +++K   K  ++ EAV LL +M   G  PD I  N++I S  K
Sbjct: 495 FNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYK 554

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              + +A+Q+ ++M    L PT  TYN L+ GL   G ++ A  L  S+     S   ++
Sbjct: 555 AGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTIS 614

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMV 580
           + T++   C   +V  A+  F +M 
Sbjct: 615 FNTLLDCFCKNDEVELALKMFSKMT 639



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 154/661 (23%), Positives = 274/661 (41%), Gaps = 54/661 (8%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
            + ++G    AV    KMK   +  +I   N+ LY+                         
Sbjct: 447  FGKSGETGKAVETFEKMKAKGIVPNIVACNASLYS------------------------- 481

Query: 66   NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
                   L +  RL++A             P  V+ N +M  Y K+G  + A  L   M+
Sbjct: 482  -------LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI 534

Query: 126  KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
            + G  PD    N LI  L  AG ++EA +  + M    + P  +TY+ L  G     ++ 
Sbjct: 535  RNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQ 594

Query: 186  GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
             A ++ + ++ K   P+ +++  L+  +C+   VE  LK+   M     K +V+ Y+ ++
Sbjct: 595  KAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVI 654

Query: 246  SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE-MCSKRI 304
              + K  +++ A    ++++   + PD VT   L+ GL K  ++  AI +  + M   R 
Sbjct: 655  YGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRF 713

Query: 305  SPN-SFAHGAILLGLCEKEMITEARMYFDSLIMSN-CIQDVVLYNIMIDGYVKLGNIGEA 362
              N SF    +   L E EM  +A ++ + L+++  C +D  L   ++    K      A
Sbjct: 714  RVNRSFWEDLMGGTLVEAEM-DKAIIFAEELVLNGICREDSFLIP-LVRVLCKHKRELYA 771

Query: 363  VQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
             Q++ +  +K  ISP++ ++N LI    +      A  L   +K  G  P A T+   + 
Sbjct: 772  YQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLA 831

Query: 422  AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             + + G I  L  L +EM ++   P  +TY +VI  L K   L +A+    D+      P
Sbjct: 832  VHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRP 891

Query: 482  DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
               TY  +I    K   L +A +L  +M  +  +P  A +NILI+G    GD + A  L 
Sbjct: 892  TPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLF 951

Query: 542  VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK-------- 593
              +    I     +YT ++   C  G V +A+ +F ++   G +     Y +        
Sbjct: 952  KRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKS 1011

Query: 594  -------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
                   + +  M + G  PD      +++     G +     +   +  +GL PD F  
Sbjct: 1012 QRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTY 1071

Query: 647  N 647
            N
Sbjct: 1072 N 1072



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 224/481 (46%), Gaps = 35/481 (7%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N ++  L +   +E+       M +  +  D  TY  + K   +   +     V+ K+  
Sbjct: 126 NFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRK 185

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
            G   +  +Y  LI    Q G   E L++   M+S+G K ++  YS L+ ++ K    + 
Sbjct: 186 AGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEM 245

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
            + LL EME +GL+P++ T++I IR L +  K+ +A +++  M  +   P+   +  ++ 
Sbjct: 246 VMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLID 305

Query: 317 GLCEKEMITEARMYF----------DSLI-------------------------MSNCIQ 341
            LC    +  A+  F          D +I                             + 
Sbjct: 306 ALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMP 365

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           DVV + I++D   K  +  EA   +  + ++ I P++ T+N+LI G  + G++ DA +LL
Sbjct: 366 DVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLL 425

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           DT++  G++P+A TY TF++ + + G   + +   ++M+ K I P  V     +  L + 
Sbjct: 426 DTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEM 485

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            +L+EA  +   +   G+ PD +TYN +++ + K   + +A  LL++M  +  EP     
Sbjct: 486 GRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVV 545

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N LID L   G +  A  +   +++  +S T V Y T++     EG V KA+  F  M+ 
Sbjct: 546 NSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIX 605

Query: 582 K 582
           K
Sbjct: 606 K 606



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 187/365 (51%), Gaps = 38/365 (10%)

Query: 23   KELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRL 79
            K+L +  ++ +YN L   L  + +T+  WDL+ D+K      + +T ++++    +  ++
Sbjct: 780  KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKI 839

Query: 80   QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
             +     +E               ++SR CK                    PDA +YNI+
Sbjct: 840  TELFELYKE---------------MISRRCK--------------------PDAITYNIV 864

Query: 140  IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
            I  L  + ++++AL+F  D+      P   TY  L  G   + ++  A ++ +++   G 
Sbjct: 865  ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924

Query: 200  DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
             P+   + +LI GY +IG+ E   +L + M+++G + ++ +Y++L+  +C +GR+DEAL 
Sbjct: 925  KPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALY 984

Query: 260  LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
               E+++ GL PD + Y+ +I GL K  ++ +A+ LYNEM ++ I P+ + + +++L L 
Sbjct: 985  YFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLG 1044

Query: 320  EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
               M+ +A+  ++ L ++    DV  YN +I GY    N   A  +Y+ ++    +P+I 
Sbjct: 1045 LAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIG 1104

Query: 380  TFNSL 384
            T+  L
Sbjct: 1105 TYAQL 1109



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 174/423 (41%), Gaps = 50/423 (11%)

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           T + ++  L   DKV     ++  M  K I  +   +  I   L  +  + +     + +
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
             +  + +   YN +I   ++ G  GEA+++YR+++ + + PS+ T+++L+    K    
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
                LL  ++  GL P+  T+T  +      G I     + + M+ +  GP  VTYTV+
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF--------------------- 493
           I  LC   +L+ A +L   M   G  PDQ+ Y T++  F                     
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 494 --------------CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
                         CK +D  +AF   + M    + P   TYN LI GL   G +++A  
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF--------------- 584
           LL +++   +  T   Y T I      G+  KA+  F +M  KG                
Sbjct: 424 LLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLA 483

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           E+      K+ F  +  NG  PD     +M+  + + G +     L + MI++G  PD  
Sbjct: 484 EMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVI 543

Query: 645 LIN 647
           ++N
Sbjct: 544 VVN 546



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 140/285 (49%), Gaps = 9/285 (3%)

Query: 1    MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVS 57
            ML  V+ ++G + +   +  +M     K    TYN ++ +L  +   D   D + D+  S
Sbjct: 828  MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS 887

Query: 58   E---TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
            +   TPR   T   +IDGL +  RL++A+   +E +     P+    N +++ Y K+G  
Sbjct: 888  DFRPTPR---TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDT 944

Query: 115  EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
            E A  LF  M+  G+ PD  SY IL+  LC+AG ++EAL + N++   G++PD I Y+ +
Sbjct: 945  ETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRI 1004

Query: 175  AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
              G     ++  A  +  ++  +G  PD+ TY  L+      G VE+  ++ E +   G 
Sbjct: 1005 INGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGL 1064

Query: 235  KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            + +V  Y+ L+     S   + A  +   M   G  P++ TY+ L
Sbjct: 1065 EPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 241/482 (50%), Gaps = 5/482 (1%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           +YD+++      NV+T ++++  LCQ +R+  A   L E A K   P  V+   I+S  C
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 205

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           KL   + A  +   M      P A SYN ++  LC    M+E     +DM   G++P+ I
Sbjct: 206 KLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVI 260

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           TY+ +   F    ++  A  ++ +++I G  P++VT+T L+ G    G V + L +   M
Sbjct: 261 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 320

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           +++G+  + ++Y++L+  +C  G +  A  +L  ME  G  P++ TYS LI G  K   +
Sbjct: 321 VAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDL 380

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             AI ++N+M      PN   +  ++   C+K M  +A+   D +++ NC  + V +N +
Sbjct: 381 GGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTL 440

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           I        +G A+ ++ ++      P+  T+N LI+G  + G   DA  ++  ++ HG+
Sbjct: 441 IRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGI 500

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           E S VTY T ++  C+    +  +  + +M  + I P   T++ +I   CK+ +++ A  
Sbjct: 501 ELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAW 560

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +L  M V+    + + Y  ++   C    L  A   L +M    + P + T+N+L+ G+ 
Sbjct: 561 MLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVF 620

Query: 530 VN 531
            N
Sbjct: 621 RN 622



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 247/486 (50%), Gaps = 12/486 (2%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M K G+HP+ F+YN+L+  LC    +  A +  ++M R G  PD +TY+ +      L +
Sbjct: 150 MRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDR 209

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A +V+  +      P   +Y  ++   C+   ++E   +   M+ +G + NVI Y+ 
Sbjct: 210 LDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTT 264

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ + CK+G +  A  +L  M   G  P++VT++ L+RGL    +VH A+ ++  M ++ 
Sbjct: 265 IVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEG 324

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +P++ ++  ++ GLC    +  A    +S+    C  +V  Y+ +IDG+ K G++G A+
Sbjct: 325 WAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAI 384

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            ++  +      P++V + +++  FCK      A+ L+D + L    P+ VT+ T + + 
Sbjct: 385 SIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSL 444

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+   + R L +  EM      P   TY  +I GL ++    +A+ ++ +M   G+    
Sbjct: 445 CDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSL 504

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TYNT++   C+ +  R+A   + +M +  ++P + T++ +I   C  G+++ A  +L +
Sbjct: 505 VTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGA 564

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTKSFF 596
           +   N     + YT ++   C +  +  AMT+  +M+ +G       + + +R   ++  
Sbjct: 565 MNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLG 624

Query: 597 CMMLSN 602
           C+  S+
Sbjct: 625 CIEPSD 630



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 164/338 (48%), Gaps = 6/338 (1%)

Query: 257 ALGLLYE-MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           A+ L+Y+ M   G+ P++ TY++L+R LC+ ++V  A ++ +EM  K   P+   +  I+
Sbjct: 142 AVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIV 201

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
             LC+ + + EA     + +++        YN ++    +   + E   +   ++ + + 
Sbjct: 202 SVLCKLDRLDEA-----TEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQ 256

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+++T+ +++  FCK G++  A  +L  + + G  P+ VT+T  +    ++G +   L +
Sbjct: 257 PNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDM 316

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
            + M  +   P+ V+Y ++I+GLC    L+ A  +L  M   G  P+  TY+T+I  F K
Sbjct: 317 WRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSK 376

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
             DL  A  + N M     +P    Y  ++D  C       A  L+  +   N     V 
Sbjct: 377 AGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVT 436

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           + T+I++ C    V +A+  F +M   G   + R Y +
Sbjct: 437 FNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNE 474



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 135/284 (47%), Gaps = 25/284 (8%)

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +G  V +Y  + +  + P++ T+N L+   C+N +V  AR++LD +   G  P  VTY T
Sbjct: 140 VGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYAT 199

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++  C+   +     +L  M      P   +Y  ++  LC+++++QE   ++ DM   G
Sbjct: 200 IVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 254

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           + P+ ITY TI+ +FCK  +LR A  +L +M +    P   T+  L+ GL  +G + +A 
Sbjct: 255 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 314

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            +   +     + + V+Y  +I+  C+ GD+  A +    M + G   ++R Y+      
Sbjct: 315 DMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYS------ 368

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                          ++  F + GDLG    +   M +SG  P+
Sbjct: 369 --------------TLIDGFSKAGDLGGAISIWNDMSRSGCKPN 398



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 32/170 (18%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           R G   DA+ ++ +M+   +++S+ TYN+                               
Sbjct: 481 REGNCGDALHMVTEMQSHGIELSLVTYNT------------------------------- 509

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
            V+ GLCQ    ++A++F+ +   +   P+  + +AI+  YCK G   +A  +   M   
Sbjct: 510 -VVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVV 568

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             H +   Y IL+  LC    + +A+ +   M   G+ P+ +T+++L +G
Sbjct: 569 NCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRG 618



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 25/201 (12%)

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           +A  P+  + T      C +  +   V + ++M   GV P+  TYN ++R+ C+   +  
Sbjct: 118 RAPPPSRGSTTTSSTRCCGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGA 177

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A ++L++M      P   TY  ++  LC    L  A  +L ++          +Y  I+ 
Sbjct: 178 ARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPP-----VAASYNAIVL 232

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQG 621
           A C E  + +  +    MV +G + ++  YT                     ++ AF + 
Sbjct: 233 ALCREFRMQEVFSVVSDMVGRGLQPNVITYT--------------------TIVDAFCKA 272

Query: 622 GDLGSVFELAAVMIKSGLLPD 642
           G+L     + A M+ +G  P+
Sbjct: 273 GELRMACAILARMVITGCTPN 293


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/623 (24%), Positives = 293/623 (47%), Gaps = 61/623 (9%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           KVS  P NV     +I GLC+  R+++A+        +      V+   ++  +C+    
Sbjct: 229 KVSAVPYNV-----LIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEEL 283

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           ++A  +   M + G  P   + + ++ GL   G +EEA      +G   + P+   Y+ L
Sbjct: 284 DMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNAL 343

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
                     S A +++ ++  KG +P+ VTY +LI   C+ G +++ L + + M  +G 
Sbjct: 344 LNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGV 403

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           ++ V  Y+ L++  CK   +D A+G L EM  +GL P+  +YS +I GLC++  +  A++
Sbjct: 404 RMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVE 463

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L+ +M  K ++ N++   A++ G C+ + + EA   F+ +  SN   + V +N +I+GY 
Sbjct: 464 LHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYC 523

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLI----------------------------- 385
            +G+I +A QLY Q++ + ++P   T+ SLI                             
Sbjct: 524 LVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKF 583

Query: 386 ------YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
                 +GFC+ G++ +A  + + + + G +   +++T  + A  ++ + ++   L +EM
Sbjct: 584 SLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREM 643

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
           + K + P +V +T +I    K+  + +A+   ++M   G  P+ +TY  ++ + CK   L
Sbjct: 644 KEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHL 703

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
             A  L  +M   +  P S T+N  +D     G+L+ A  L  ++ +  ++   V+  T+
Sbjct: 704 SSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLA-NIVSVNTL 762

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
           IK  C  G + +A+    +  E GF      Y+                E+C        
Sbjct: 763 IKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVI------------HELC-------- 802

Query: 620 QGGDLGSVFELAAVMIKSGLLPD 642
           + GD+    EL   M+  G+ PD
Sbjct: 803 KKGDINEAIELWNEMLYKGVKPD 825



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/535 (26%), Positives = 247/535 (46%), Gaps = 15/535 (2%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           L L  G+ PD  + + ++  L        A    + M   GV  D   Y+   + +  + 
Sbjct: 152 LSLSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVR 211

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            + GA  ++ ++  +G     V Y VLI G C+   V E + ++  ML++G   + +   
Sbjct: 212 NLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCR 271

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C++  +D AL +  +M  +G  P     S ++ GL K+ +V +A +L  ++   
Sbjct: 272 TLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGEL 331

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
           R+ PN FA+ A+L  +C+  M +EA    + +       + V Y I+I    K G + +A
Sbjct: 332 RMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDA 391

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + +  ++ EK +  ++  +NSLI   CK   +  A   L  +   GL P+A +Y+  +  
Sbjct: 392 LCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAG 451

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C +G++   + L ++M  K +     T+T +I G CK  K+ EA +L   M    + P+
Sbjct: 452 LCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPN 511

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           ++T+N +I  +C   D+RKAFQL +QM    L P + TY  LI GLC+      A   + 
Sbjct: 512 EVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVA 571

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------- 592
            L+ +   L K + T ++   C EG + +A   + +M   G ++ +  +T          
Sbjct: 572 DLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQH 631

Query: 593 ---KS--FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              KS   F  M   G  PD      M+  + + G++         MI  G LP+
Sbjct: 632 DSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPN 686



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 259/529 (48%), Gaps = 4/529 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           + G V +A  +  ++ EL +  +I  YN+LL N+    +  +   L +++       N  
Sbjct: 314 KKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEV 373

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I+I  LC++  + DA+  L     K    +V   N++++  CK    ++A G    M
Sbjct: 374 TYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEM 433

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ GL P+A SY+ +I GLC  G +  A+E    M   GV  +  T++ L  GF    ++
Sbjct: 434 VEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKM 493

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++  K+     +P+ VT+  +I GYC +G++ +  +L + M+ +G   +   Y  L
Sbjct: 494 DEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSL 553

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +S +C +    +A   + ++E      +  + + L+ G C++ ++ +A  ++NEM     
Sbjct: 554 ISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGG 613

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             +  +   I+    ++    ++ + F  +       D V +  MI+ Y K GN+ +A+ 
Sbjct: 614 KLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALN 673

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
            + ++I     P+ VT+ +L+   CK+  ++ A  L   +      P++ T+  F++ + 
Sbjct: 674 CWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFA 733

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
            EGN++    L   M  +      V+   +IKG CK  ++QEA+ L+      G  PD I
Sbjct: 734 TEGNLETAKDLYFAM-LQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCI 792

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           +Y+T+I   CK  D+ +A +L N+M    ++P    YNILI    ++G+
Sbjct: 793 SYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGE 841



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 250/487 (51%), Gaps = 6/487 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD----IMWDLYDDIKVSETPRNV 63
           + GM+ DA+ ++ +M+E  +++++  YNSL+      D     M  L + +++  TP N 
Sbjct: 384 KRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTP-NA 442

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            + S VI GLC++  L  A+   ++ A K    +  +  A+++ +CK    + A  LF  
Sbjct: 443 ASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNK 502

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M +  L P+  ++N +I G C+ G + +A +  + M   G+ PD  TY  L  G  L   
Sbjct: 503 MTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDG 562

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
            S A + +  L    S  +  + T L+ G+C+ G + E   +   M   G KL++I++++
Sbjct: 563 ASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTI 622

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ +  K    +++  L  EM+  G++PD V ++ +I    K+  + +A+  ++EM +  
Sbjct: 623 IVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADG 682

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN+  + A++  LC+   ++ A +    ++ S+ + +   +N  +D +   GN+  A 
Sbjct: 683 HLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAK 742

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            LY  +++  ++ +IV+ N+LI GFCK G++ +A  L+     +G  P  ++Y+T ++  
Sbjct: 743 DLYFAMLQGFLA-NIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHEL 801

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C++G+I   + L  EM  K + P  V Y ++I+      +  + + +  DM   GV P+ 
Sbjct: 802 CKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNW 861

Query: 484 ITYNTII 490
            T+  + 
Sbjct: 862 HTHRALF 868



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 201/421 (47%)

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           V+   L  G  PD  T + ++    +I        L + ML  G  L+   Y+  + + C
Sbjct: 149 VLHLSLSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYC 208

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           +   +D A GL+  M+  G K   V Y++LI GLCK  +V +A+ + N M ++ ++ +  
Sbjct: 209 EVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEV 268

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
               ++ G C  E +  A      +     +      + M+DG  K G + EA +L  QL
Sbjct: 269 TCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQL 328

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            E R+ P+I  +N+L+   CKNG  ++A RL++ +   GLEP+ VTY   +++ C+ G +
Sbjct: 329 GELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMM 388

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
              L +L  M  K +  T   Y  +I   CK+  L  A+  L +M  IG+TP+  +Y+ +
Sbjct: 389 DDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPV 448

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I   C+  DL  A +L  +M    +   + T+  LI+G C    +  A  L   + E N+
Sbjct: 449 IAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNL 508

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
              +V +  +I+ +C  GD+ KA   + QM+ +G       Y      + L++G    +E
Sbjct: 509 EPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKE 568

Query: 610 I 610
            
Sbjct: 569 F 569



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 141/585 (24%), Positives = 258/585 (44%), Gaps = 27/585 (4%)

Query: 83  ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
           +L L  +AG    P   + + I+    K+    +A+ LF  ML  G+  D + Y   I  
Sbjct: 149 VLHLSLSAG--IAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRA 206

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
            C   +++ A      M   G +  A+ Y++L  G     ++  A  V   +L +G   D
Sbjct: 207 YCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAAD 266

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
            VT   L+ G+C+   ++  L++   M   GF  +    S +L  + K GR++EA  L  
Sbjct: 267 EVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLAC 326

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           ++  + + P++  Y+ L+  +CK     +A +L NEM  K + PN   +  ++  LC++ 
Sbjct: 327 QLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRG 386

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
           M+ +A    D +        V  YN +I+   K  ++  A+    +++E  ++P+  +++
Sbjct: 387 MMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYS 446

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
            +I G C+ G ++ A  L   +   G+  +  T+T  +N +C+   +     L  +M   
Sbjct: 447 PVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTES 506

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P  VT+  VI+G C    +++A QL + M   G+TPD  TY ++I   C      KA
Sbjct: 507 NLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKA 566

Query: 503 FQLLNQMWLHNLEPTSATYN-----ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
                + ++ +LE   +  N      L+ G C  G L  A  +   +      L  +++T
Sbjct: 567 -----KEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFT 621

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEIS-------IRDYTK------SFFCM--MLSN 602
            I+ A   + D  K+   F +M EKG           I  Y+K      +  C   M+++
Sbjct: 622 IIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIAD 681

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           G  P+      ++    +   L S   L   M+ S  LP+ +  N
Sbjct: 682 GHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFN 726



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 156/349 (44%), Gaps = 37/349 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPRN 62
           Y   G +  A  +  +M    L     TY SL+  L  TD      +   D++ + +  N
Sbjct: 522 YCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLN 581

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            ++ + ++ G C++ RL +A     E A       ++S   I+    K   +E +  LF 
Sbjct: 582 KFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFR 641

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA----KGF 178
            M + G+ PD   +  +I+     G+M +AL   ++M   G  P+ +TY+ L     K +
Sbjct: 642 EMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSW 701

Query: 179 HLLSQ---------------------------ISGAWKVIQKL---LIKGSDPDIVTYTV 208
           HL S                              G  +  + L   +++G   +IV+   
Sbjct: 702 HLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLANIVSVNT 761

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI G+C++G ++E + L       GF  + I+YS ++  +CK G I+EA+ L  EM   G
Sbjct: 762 LIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKG 821

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           +KPD+V Y+ILIR      +  K + +Y +M  K + PN   H A+ +G
Sbjct: 822 VKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALFVG 870



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 63/122 (51%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+ + + +I G C+  ++Q+AI  +  +    F P  +S + ++   CK G    A  L+
Sbjct: 755 NIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELW 814

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  G+ PD  +YNILI    I G  ++ L    DM + GV+P+  T+  L  G  L+
Sbjct: 815 NEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALFVGTSLM 874

Query: 182 SQ 183
           S+
Sbjct: 875 SK 876


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 163/619 (26%), Positives = 281/619 (45%), Gaps = 21/619 (3%)

Query: 31  IQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA 90
           I+  N+LL  L    ++ D+ + +      RN++T + +I+  C    L  A   L    
Sbjct: 43  IRCLNTLLMALARHGMLSDM-ESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLL 101

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
                P   +  + +  YC+ G    A  LF LM + G     F+Y  L+ GLC AG + 
Sbjct: 102 RAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVR 161

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           EA+     M   G  PD+  YSI+  G     +   A  ++   + KG  P++  Y  LI
Sbjct: 162 EAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALI 221

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            GYC  G++E  + + + M S+G   NV  Y+ L+   CKSG+++ A+ L   M   GL 
Sbjct: 222 DGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLA 281

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P++VTY+ LI+G C +  +  A +L + M +  ++PN +    ++  LC+   I EA+ +
Sbjct: 282 PNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQF 341

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
             SL+      + V+Y  MID   K G    A  L +++I +   P    ++SLI G C+
Sbjct: 342 LGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCR 401

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
             K+ +A  LL+ +   G++ +AV +T  ++ +  E        +   M    + P  VT
Sbjct: 402 ENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVT 461

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           YTV I+  C+  ++++A  ++  M   GV P+  TYNT+I+ +     + +AF  L  M 
Sbjct: 462 YTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMI 521

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
            +  +P   +Y +L+ GL           LL     H++    ++   I+     E  + 
Sbjct: 522 DNGCKPNDESYTVLL-GL-----------LLKKNSYHDLVADSISLWKIVDMKVLEELLE 569

Query: 571 KAMTFFCQMVEKGFEISIR--------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           + +   C      ++  IR        +  KSF   M S    P +++   M+   ++  
Sbjct: 570 EVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMK 629

Query: 623 DLGSVFELAAVMIKSGLLP 641
            L         M+K   LP
Sbjct: 630 LLKEALRFLDSMVKRNYLP 648



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 154/597 (25%), Positives = 277/597 (46%), Gaps = 21/597 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y RTG+   A  +   M +     +  TY +LL  L    ++ +   ++  +       +
Sbjct: 119 YCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPD 178

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +  SI++ GLC   R  +A+  L +  GK F P+V   NA++  YC  G  E+A  +F 
Sbjct: 179 SHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFK 238

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G  P+  +Y  LI G C +G +E A+   + M   G+ P+ +TY+ L +G     
Sbjct: 239 GMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEG 298

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A++++  +   G  P+  T  VLI   C+ G +EE  +    ++ +G K+N + Y+
Sbjct: 299 HLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYT 358

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++ ++CKSG+ D A  L+ ++   G  PD   YS LI GLC+++K+ +AI L N+M   
Sbjct: 359 SMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIES 418

Query: 303 RISPNSFAHGAILLGLCEKEMITEA-RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
            +  N+     IL+    +E  +++ +M  D +  +    DVV Y + I  Y + G + +
Sbjct: 419 GVQANAVPF-TILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMED 477

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  +  Q+I+  + P++ T+N+LI G+   G V+ A   L  +  +G +P+  +YT  + 
Sbjct: 478 AESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLG 537

Query: 422 AYCEEGNIQRLLA----------------LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
              ++ +   L+A                LL+E+           Y   I+ L K  +L+
Sbjct: 538 LLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLE 597

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA   L  M    +TP +  Y  +I    + K L++A + L+ M   N  P   +Y  +I
Sbjct: 598 EAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFII 657

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
             LC  G    A  +   +     +  ++A+  +I     +G+          M E+
Sbjct: 658 CALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQ 714



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 164/638 (25%), Positives = 267/638 (41%), Gaps = 60/638 (9%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM----WDLYDDIKVS 57
           L    +R GM+ D   + A+M   +L     TY +L+    H   +      L   ++  
Sbjct: 49  LLMALARHGMLSDMESLAARMPVRNL----HTYTTLINAYCHAGDLPAAKRHLSSLLRAG 104

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
             P +    S V+ G C+      A         +    +  +  A++   C  G    A
Sbjct: 105 LAPDSHAYTSFVL-GYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREA 163

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             +F  M   G  PD+  Y+I++HGLC AG   EA+    D    G  P+   Y+ L  G
Sbjct: 164 MAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDG 223

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +     +  A  + + +  KG  P++ TYT LICG+C+ G VE  + L   M+  G   N
Sbjct: 224 YCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPN 283

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V+ Y+ L+   C  G ++ A  LL+ MEA GL P+  T  +LI  LCK  ++ +A Q   
Sbjct: 284 VVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLG 343

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            +  K I  N   + +++  LC+      A      +I    + D  +Y+ +IDG  +  
Sbjct: 344 SLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCREN 403

Query: 358 NIGEAVQLYRQLIE--------------------------KRIS---------PSIVTFN 382
            + EA+ L   +IE                          K IS         P +VT+ 
Sbjct: 404 KLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYT 463

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
             I  +C++G++ DA  ++  +  HG+ P+  TY T +  Y   G + +  + L+ M   
Sbjct: 464 VFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDN 523

Query: 443 AIGPTHVTYTVVIKGLCKQ-------------WKLQEAV---QLLEDMYVIGVTPDQITY 486
              P   +YTV++  L K+             WK+ +     +LLE++  +  +     Y
Sbjct: 524 GCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVY 583

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           +  IR   K   L +A   L  M   NL P+   Y  +I+       LK A   L S+ +
Sbjct: 584 DCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVK 643

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            N      +Y  II A C EG  H A + F  ++ K +
Sbjct: 644 RNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEY 681



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/468 (21%), Positives = 187/468 (39%), Gaps = 89/468 (19%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           + ++G V  A+ + ++M E  L  ++ TY +L+    +  H +  + L   ++      N
Sbjct: 259 FCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPN 318

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T  ++ID LC+  R+++A  FL     K    + V   +++   CK G  + A  L  
Sbjct: 319 EWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQ 378

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM----------------GRH---- 162
            ++  G  PDA  Y+ LI GLC    + EA+   NDM                 +H    
Sbjct: 379 KIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREF 438

Query: 163 ---------------GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
                          GV+PD +TY++  + +    ++  A  ++ +++  G  P++ TY 
Sbjct: 439 RSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYN 498

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS--------------------- 246
            LI GY  +G V +     + M+  G K N  +Y+VLL                      
Sbjct: 499 TLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKI 558

Query: 247 ------------------------------SMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
                                          + K  R++EA   L  M++  L P    Y
Sbjct: 559 VDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVY 618

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + +I    +   + +A++  + M  +   P   ++  I+  LCE+     A+  F  ++ 
Sbjct: 619 TCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILS 678

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
               +D + + I+IDG ++ GN  +  +L   + E+   P    ++ L
Sbjct: 679 KEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/232 (19%), Positives = 81/232 (34%), Gaps = 24/232 (10%)

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P      T + A    G +  + +L   M  + +     TYT +I   C    L  A + 
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPVRNLH----TYTTLINAYCHAGDLPAAKRH 96

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L  +   G+ PD   Y + +  +C+      A +L   M       T  TY  L+ GLC 
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            G ++ A  +   +     +     Y+ ++   C  G   +A+      + KGF      
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFV----- 211

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                          P+  +   ++  +   GDL    ++   M   G LP+
Sbjct: 212 ---------------PNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPN 248


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 161/624 (25%), Positives = 289/624 (46%), Gaps = 51/624 (8%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +++   + ++L DAI         +  P +  LN +++   K      A+ ++  M+  G
Sbjct: 180 LLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKG 239

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           +H D F+ +I++       + EEA +F  +    GV+ DA  YSI+ + F     +  A 
Sbjct: 240 VHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELAC 299

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            +++ +  KG  P   T+T +I    + GN+ E L+L++ M+S G ++NV+  + L+   
Sbjct: 300 GLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGY 359

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK  ++  AL    +M   G  P+ VTY++LI   CK   + KA  LY +M +K I P  
Sbjct: 360 CKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTV 419

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F   +++ G  + E   EA   FD  +  + I ++  YN ++    K G + EA  L+++
Sbjct: 420 FIVNSLIRGFLKVESREEASKLFDEAVACD-IANIFTYNSLLSWLCKEGKMSEATTLWQK 478

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +++K ++P+ V++NS+I G C+ G +  A  +   +   GL+P+ +TY+  M+ Y + G+
Sbjct: 479 MLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGD 538

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE---------------- 472
            +    +   M  + I P+  TY + I GLCK  +  EA  +L+                
Sbjct: 539 TEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNS 598

Query: 473 -------------------DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
                              +M   GV+P+ ITY T+I  FCK  +   A ++ N+M    
Sbjct: 599 IMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKG 658

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           LE   A Y  LIDG C   D++ A  L   L +  +S   V Y ++I  +    ++  A+
Sbjct: 659 LELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAAL 718

Query: 574 TFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAF 618
               +M+ +G    ++ YT                  +  M + G  PD  I  V++   
Sbjct: 719 NLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGL 778

Query: 619 HQGGDLGSVFELAAVMIKSGLLPD 642
              G L +  ++ A M +  + P+
Sbjct: 779 CGKGQLENAQKILAEMERDSITPN 802



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 165/655 (25%), Positives = 300/655 (45%), Gaps = 19/655 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y +   ++DA+    ++ E D+   I+  N LL  L   D++++   +Y+ + +     +
Sbjct: 184 YIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGD 243

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T  I++    + +  ++A  F  E   +       + + ++  +CK    E+A GL  
Sbjct: 244 CFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLK 303

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G  P   ++  +I      G+M EAL   ++M   GV+ + +  + L KG+    
Sbjct: 304 DMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQD 363

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A +   K+   G  P+ VTY VLI   C+ GN+ +   L   M ++     V   +
Sbjct: 364 KLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVN 423

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+    K    +EA  L  E  A  +  ++ TY+ L+  LCK+ K+ +A  L+ +M  K
Sbjct: 424 SLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDK 482

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            ++P   ++ +++LG C +  +  A   F  ++      +V+ Y+I++DGY K G+   A
Sbjct: 483 GLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYA 542

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             ++ +++++ I PS  T+N  I G CK G+ ++A+ +L      G  P  +TY + M+ 
Sbjct: 543 FYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDG 602

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           + +EG++   L   +EM    + P  +TYT +I G CK      A+++  +M   G+  D
Sbjct: 603 FIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELD 662

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
              Y  +I  FCK +D+  A  L +++    L P S  YN LI G     +++ A  L  
Sbjct: 663 IAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQK 722

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------- 592
            +    IS     YTT+I     EG +  A+  + +M  KG    I  YT          
Sbjct: 723 RMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKG 782

Query: 593 -----KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                +     M  +   P+  I   ++    + G+L   F L   M+  GL P+
Sbjct: 783 QLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPN 837



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 223/443 (50%), Gaps = 1/443 (0%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           +DLY  +K       V+  + +I G  +    ++A     E    +   ++ + N+++S 
Sbjct: 404 YDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSW 462

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
            CK G    A  L+  ML  GL P   SYN +I G C  G+++ A    +DM   G++P+
Sbjct: 463 LCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPN 522

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            ITYSIL  G+        A+ V  +++ +   P   TY + I G C++G   E   + +
Sbjct: 523 VITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLK 582

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
             + +GF    + Y+ ++    K G +  AL    EM   G+ P+++TY+ LI G CK +
Sbjct: 583 KFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNN 642

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
               A+++ NEM +K +  +  A+GA++ G C+K+ I  A   F  L+      + V+YN
Sbjct: 643 NTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYN 702

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I GY  L N+  A+ L ++++ + IS  + T+ +LI G  K G++  A  L   +   
Sbjct: 703 SLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAK 762

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G+ P  + YT  +N  C +G ++    +L EME  +I P    Y  +I G  K   LQEA
Sbjct: 763 GIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEA 822

Query: 468 VQLLEDMYVIGVTPDQITYNTII 490
            +L  +M   G+TP+  TY+ +I
Sbjct: 823 FRLHNEMLDKGLTPNDTTYDILI 845



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 235/518 (45%), Gaps = 41/518 (7%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   + ++ G C+Q +L  A+ F  +       P+ V+   ++   CK G    A  L+
Sbjct: 348 NVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLY 407

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M    + P  F  N LI G     S EEA +  ++     +  +  TY+ L       
Sbjct: 408 TQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKE 466

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++S A  + QK+L KG  P  V+Y  +I G+C+ GN++    +   ML  G K NVI Y
Sbjct: 467 GKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITY 526

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK-------QDKVHK--- 291
           S+L+    K+G  + A  +   M    + P   TY+I I GLCK       QD + K   
Sbjct: 527 SILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVE 586

Query: 292 -------------------------AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
                                    A+  Y EMC   +SPN   +  ++ G C+      
Sbjct: 587 KGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDL 646

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A    + +       D+  Y  +IDG+ K  +I  A  L+ +L++  +SP+ V +NSLI 
Sbjct: 647 ALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLIS 706

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G+     +  A  L   +   G+     TYTT ++   +EG +   L L  EM  K I P
Sbjct: 707 GYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIP 766

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             + YTV+I GLC + +L+ A ++L +M    +TP+   YN +I    K  +L++AF+L 
Sbjct: 767 DIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLH 826

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           N+M    L P   TY+ILI     NG +K  +  L SL
Sbjct: 827 NEMLDKGLTPNDTTYDILI-----NGKIKGGNSALKSL 859



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 202/415 (48%), Gaps = 11/415 (2%)

Query: 29  VSIQTYNSLLY------NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDA 82
            +I TYNSLL        +     +W    D  ++  P  V  NS+++ G C+Q  L  A
Sbjct: 451 ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLA--PTKVSYNSMIL-GHCRQGNLDMA 507

Query: 83  ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
                +       P+V++ + +M  Y K G  E A  +F  M+   + P  F+YNI I+G
Sbjct: 508 ASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKING 567

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           LC  G   EA +        G  P  +TY+ +  GF     +S A    +++   G  P+
Sbjct: 568 LCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPN 627

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           ++TYT LI G+C+  N +  LK+R  M ++G +L++ AY  L+   CK   I+ A  L  
Sbjct: 628 VITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFS 687

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           E+   GL P+ V Y+ LI G    + +  A+ L   M  + IS +   +  ++ GL ++ 
Sbjct: 688 ELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEG 747

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            +  A   +  +     I D+++Y ++I+G    G +  A ++  ++    I+P++  +N
Sbjct: 748 RLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYN 807

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN--IQRLLAL 435
           +LI G  K G + +A RL + +   GL P+  TY   +N   + GN  ++ LL+L
Sbjct: 808 ALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSALKSLLSL 862



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 134/554 (24%), Positives = 234/554 (42%), Gaps = 53/554 (9%)

Query: 146 AGSMEEAL--EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
           +G M   L   F     R   + D   Y+ L   +   ++++ A     +L+     P I
Sbjct: 150 SGPMPNILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWI 209

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
                L+    +   + E  ++ E M+ +G   +     +++ +  K    +EA     E
Sbjct: 210 KFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLE 269

Query: 264 MEAVGLKPDLVTYSILIRGLC-----------------------------------KQDK 288
            ++ G+K D   YSI+I+  C                                   KQ  
Sbjct: 270 AKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGN 329

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + +A++L +EM S  +  N      ++ G C+++ +  A  +FD +  +    + V Y +
Sbjct: 330 MVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAV 389

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I+   K GN+ +A  LY Q+  K I P++   NSLI GF K     +A +L D      
Sbjct: 390 LIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACD 449

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           +  +  TY + ++  C+EG +     L Q+M  K + PT V+Y  +I G C+Q  L  A 
Sbjct: 450 I-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAA 508

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            +  DM   G+ P+ ITY+ ++  + K  D   AF + ++M   N+ P+  TYNI I+GL
Sbjct: 509 SVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGL 568

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C  G    A  +L    E       + Y +I+     EG V  A+T + +M E G   ++
Sbjct: 569 CKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNV 628

Query: 589 RDYTK--SFFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             YT   + FC              M + G   D      ++  F +  D+ +   L + 
Sbjct: 629 ITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSE 688

Query: 634 MIKSGLLPDKFLIN 647
           ++  GL P+  + N
Sbjct: 689 LLDGGLSPNSVIYN 702


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 283/582 (48%), Gaps = 4/582 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVSETPRN 62
           Y R       + V  ++    L   + +YN+L+         D   DL+  ++      N
Sbjct: 199 YRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPN 258

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T S +I+GLC+   +  A   L++  G    P+ ++ N ++  Y   G  + +  +F 
Sbjct: 259 VVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFK 318

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M    L PD  + N  +  LC  G ++EA +  + M   G +PD I+Y  L  G+    
Sbjct: 319 EMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAG 378

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            I+G   +   ++ +G  PD   +  LI  Y ++G +++ L + E M  QG   ++I +S
Sbjct: 379 CIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFS 438

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++S+ C+ GR+D+A+     M   G+ PD   YS LI+G C +  + KA +L ++M SK
Sbjct: 439 TVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSK 498

Query: 303 RISPNSFA-HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
            I P       +I+  LC++  + E +   D +I +    +++ +N ++DGY  +GN+ E
Sbjct: 499 GIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKE 558

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           AV L   +    + P I T+N+L+ G+CK+G++ DA  L   +    +  ++V+Y   ++
Sbjct: 559 AVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILH 618

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
              +         +  EM    +  +  TY  V+ GLC+     EA  LLE ++ + V  
Sbjct: 619 GLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKF 678

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D +T+N +IR+  K    ++A +L   +  + L PT  TY ++I  L      ++AD L 
Sbjct: 679 DILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLF 738

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            S+++ + +        II+    +G+V KA  +  ++ +KG
Sbjct: 739 SSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKG 780



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 147/616 (23%), Positives = 272/616 (44%), Gaps = 24/616 (3%)

Query: 47  MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMS 106
           ++   D     E    +YT +I+I+   +  R    +           GP V S NA++ 
Sbjct: 173 LFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALID 232

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
            + K G  + A  LF  M + G+ P+  +Y+ LI+GLC    M++A      M   GV P
Sbjct: 233 GFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRP 292

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD----PDIVTYTVLICGYCQIGNVEEG 222
           + +TY+ L  G+      SG WK   ++  + S     PD+      +   C+ G ++E 
Sbjct: 293 NNMTYNCLIHGY----STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEA 348

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
             + + M+ +G K +VI+Y  LL     +G I     L   M   G+ PD   ++ LI  
Sbjct: 349 RDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINA 408

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
             +   + K++ ++ +M  + ++P+      ++   C    + +A   F+ +I +    D
Sbjct: 409 YARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPD 468

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF-NSLIYGFCKNGKVADARRLL 401
             +Y+ +I G     ++ +A +L   ++ K I P  + F  S+I   CK G+VA+ + ++
Sbjct: 469 TAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVV 528

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           D I   G  P+ +T+ + ++ YC  GN++  + LL  ME+  + P   TY  ++ G CK 
Sbjct: 529 DLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKH 588

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++ +A+ L  DM    VT   ++YN I+    + +    A ++ ++M    +  +  TY
Sbjct: 589 GRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTY 648

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
             ++ GLC N     A+ LL  L   N+    + +  +I+A    G   +A   F  +  
Sbjct: 649 ATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAIST 708

Query: 582 KGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
            G   +I  Y                 + F  M  +   PD  I   ++      G++  
Sbjct: 709 YGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAK 768

Query: 627 VFELAAVMIKSGLLPD 642
                + + K G+LP+
Sbjct: 769 AGNYLSKIDKKGILPE 784



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 252/533 (47%), Gaps = 6/533 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNV 63
           +T  +  A  V+ +M    ++ +  TYN L++    T  MW     ++ ++  S    +V
Sbjct: 271 KTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGY-STSGMWKESVRVFKEMSSSLLVPDV 329

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
              +  +  LC+  R+++A         K   P V+S  A++  Y   G       LF +
Sbjct: 330 GNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNV 389

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G+ PD   +N LI+     G M+++L    DM + GV PD IT+S +   F  L +
Sbjct: 390 MVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGR 449

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY-S 242
           +  A +    ++  G  PD   Y+ LI G C   ++ +  +L   MLS+G     I + +
Sbjct: 450 LDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFT 509

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +++++CK GR+ E   ++  +   G +P+L+T++ L+ G C    + +A+ L + M S 
Sbjct: 510 SIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESV 569

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+ + +  ++ G C+   I +A   F  ++        V YNI++ G  +      A
Sbjct: 570 GVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVA 629

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +++ ++IE  ++ SI T+ +++ G C+N    +A  LL+ +    ++   +T+   + A
Sbjct: 630 KEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRA 689

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
             + G  Q    L   + T  + PT +TY V+I  L K+   ++A  L   M     TPD
Sbjct: 690 MFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPD 749

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
               N IIR      ++ KA   L+++    + P + T ++LI    VNG  +
Sbjct: 750 SRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYR 802



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 238/509 (46%), Gaps = 4/509 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRN 62
           YS +GM  ++V V  +M    L   +   NS +  L +H  I    D++D + +     +
Sbjct: 304 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 363

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V +   ++ G      +            +   P     N +++ Y +LG  + +  +F 
Sbjct: 364 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFE 423

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K G++PD  +++ +I   C  G +++A+E  N M   GV PD   YS L +G     
Sbjct: 424 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRR 483

Query: 183 QISGAWKVIQKLLIKGSDPDIVTY-TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +  A ++I  +L KG  P  + + T +I   C+ G V EG  + ++++  G + N+I +
Sbjct: 484 DLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITF 543

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C  G + EA+GLL  ME+VG++PD+ TY+ L+ G CK  ++  A+ L+ +M  
Sbjct: 544 NSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLH 603

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           KR++  S ++  IL GL +      A+  F  +I S     +  Y  ++ G  +     E
Sbjct: 604 KRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDE 663

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L  +L    +   I+TFN +I    K G+  +A+ L   I  +GL P+ +TY   + 
Sbjct: 664 ANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMIT 723

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
              +E + +    L   ME  +  P       +I+ L  + ++ +A   L  +   G+ P
Sbjct: 724 NLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILP 783

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           +  T + +I  F      R+  +LL + +
Sbjct: 784 EATTTSLLIYLFSVNGKYREYIKLLPEKY 812


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 238/486 (48%), Gaps = 3/486 (0%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLN 102
           D M  +Y D+       +++T + ++D  C+  R+  A+  L++   +  G  P+ V+ N
Sbjct: 211 DDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYN 270

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
            +++   + G  E A  L  +M +      AF+YN LI GL     +E+A     +M   
Sbjct: 271 VVINGLARKGELEKAAQLVDIM-RLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENE 329

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G+ P  +TY+ L  G         A     ++  KG  PD++TY  LI GYC+ GN+++ 
Sbjct: 330 GIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQA 389

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           L L   +   G    V+ Y++L+   C+ G ++ A  L  EM      PD+ TY+IL+ G
Sbjct: 390 LCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNG 449

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
            C    +      ++EM SK + P+ FA+   +        IT A    + +++     D
Sbjct: 450 SCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSD 509

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
            V YN++IDG  K G++ +A  L+ +++   +    VT+  LI+  C+ G++ +A+ + D
Sbjct: 510 TVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFD 569

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   GL PS VTYT F++ YC  GN+       ++M  + + P  VTY V++  LC+  
Sbjct: 570 GMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMG 629

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           + + A Q   +M   G+ P++ TY  +I   CK  +   A +L  +M    + P   T+N
Sbjct: 630 RTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHN 689

Query: 523 ILIDGL 528
            L  G 
Sbjct: 690 ALFKGF 695



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/434 (32%), Positives = 222/434 (51%), Gaps = 20/434 (4%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA--VGLKPDLVTYSILIRGLCKQ 286
           ML  G + ++  Y+ LL S CK+GR+D+A+ LL +MEA   G  P+ VTY+++I GL ++
Sbjct: 220 MLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARK 279

Query: 287 DKVHKAIQLYNEM-CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
            ++ KA QL + M  SK+ S  +F +  ++ GL  ++ + +A      +     +  VV 
Sbjct: 280 GELEKAAQLVDIMRLSKKAS--AFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVT 337

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN +IDG  K GN   A   + ++  K + P ++T+NSLI G+CK G +  A  L   +K
Sbjct: 338 YNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLK 397

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             GL P+ +TY   ++ YC  G+++    L +EM  +   P   TYT+++ G C    L 
Sbjct: 398 RAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLA 457

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
                 ++M   G+ PD   YNT I +      +  AFQL  +M L  +   + TYN+LI
Sbjct: 458 MVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLI 517

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           DGLC  G LK+A  L + +    + L  V YT +I AHC  G + +A   F  MV  G  
Sbjct: 518 DGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLS 577

Query: 586 ISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
            S+  YT                 +F  ML  G  P++    V++ A  + G   S ++ 
Sbjct: 578 PSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQH 637

Query: 631 AAVMIKSGLLPDKF 644
              M++ GL+P+K+
Sbjct: 638 FHEMLERGLVPNKY 651



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 237/487 (48%), Gaps = 4/487 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLM--LKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           PS+ + N ++  +CK G  + A  L   M     G  P+  +YN++I+GL   G +E+A 
Sbjct: 227 PSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAA 286

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           +   D+ R   +  A TY+ L  G      +  A  ++ ++  +G  P +VTY  LI G 
Sbjct: 287 QLV-DIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGL 345

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
            + GN E      + M ++G   ++I Y+ L++  CK+G + +AL L  +++  GL P +
Sbjct: 346 FKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTV 405

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           +TY+ILI G C+   +  A +L  EM  +   P+   +  ++ G C    +   R++FD 
Sbjct: 406 LTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDE 465

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++      D   YN  I   + +G I  A QL  +++ + IS   VT+N LI G CK G 
Sbjct: 466 MLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGS 525

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + DA  L   +   GL    VTYT  ++A+CE G +     +   M    + P+ VTYT+
Sbjct: 526 LKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTI 585

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
            I   C++  L  A      M   GV P+++TYN ++ + C+      A+Q  ++M    
Sbjct: 586 FIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERG 645

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           L P   TY +LIDG C  G+  +A  L   + +  I      +  + K    EG ++ A+
Sbjct: 646 LVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGF-GEGHMYDAV 704

Query: 574 TFFCQMV 580
            +   +V
Sbjct: 705 QYLENVV 711



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 246/470 (52%), Gaps = 11/470 (2%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL------RHTDI--MWDLYDDIKVSETPRNVYTNSIV 69
            +A +K+++ + +    N + YN+      R  ++     L D +++S+   + +T + +
Sbjct: 248 AVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKA-SAFTYNPL 306

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           I GL  +  ++ A   L E   +   P+VV+ N ++    K G AE A+  F  M   GL
Sbjct: 307 ITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGL 366

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            PD  +YN LI+G C AG++++AL    D+ R G+ P  +TY+IL  G+  L  + GA +
Sbjct: 367 LPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARR 426

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           + +++  +   PD+ TYT+L+ G C + N+       + MLS+G + +  AY+  +S+  
Sbjct: 427 LKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAEL 486

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
             G I  A  L  EM   G+  D VTY++LI GLCK   +  A  L+ +M +  +  +  
Sbjct: 487 TIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCV 546

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            +  ++   CE+  + EA+  FD ++ S     VV Y I I  Y + GN+  A   +R++
Sbjct: 547 TYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKM 606

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           +E+ + P+ VT+N L++  C+ G+   A +    +   GL P+  TYT  ++  C+EGN 
Sbjct: 607 LEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNW 666

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
              + L  EM  K I P H T+  + KG   +  + +AVQ LE++ V+G 
Sbjct: 667 VHAIRLYCEMHQKGIHPDHCTHNALFKGF-GEGHMYDAVQYLENV-VLGT 714



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 238/502 (47%), Gaps = 7/502 (1%)

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
            QE A     P V   N ++         +  + ++  ML+ G+ P  F+YN L+   C 
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241

Query: 146 AGSMEEALEFTNDMGRH--GVEPDAITYSILAKGFHLLSQISGAWKV--IQKLLIKGSDP 201
           AG M++A+    DM     G  P+ +TY+++  G     ++  A ++  I +L  K S  
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKAS-- 299

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
              TY  LI G      VE+   L   M ++G    V+ Y+ L+  + K+G  + A    
Sbjct: 300 -AFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKF 358

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            EM A GL PDL+TY+ LI G CK   + +A+ L+ ++    + P    +  ++ G C  
Sbjct: 359 DEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRL 418

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             +  AR   + +   +C+ DV  Y I+++G   + N+      + +++ K + P    +
Sbjct: 419 GDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAY 478

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N+ I      G + +A +L + + L G+    VTY   ++  C+ G+++    L  +M T
Sbjct: 479 NTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVT 538

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
             +    VTYT +I   C++ +L EA  + + M   G++P  +TY   I ++C+  +L  
Sbjct: 539 DGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYL 598

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A+    +M    +EP   TYN+L+  LC  G  ++A      + E  +   K  YT +I 
Sbjct: 599 AYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLID 658

Query: 562 AHCAEGDVHKAMTFFCQMVEKG 583
             C EG+   A+  +C+M +KG
Sbjct: 659 GSCKEGNWVHAIRLYCEMHQKG 680



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 247/540 (45%), Gaps = 28/540 (5%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           S+ A  S  C   F E+A+        +G+ P     N ++  L  A   ++     +DM
Sbjct: 169 SVPASCSTQCLSAFQEMAR--------HGVAPFVKECNCVLRVLRDAARWDDMRAVYSDM 220

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK--GSDPDIVTYTVLICGYCQIG 217
            + GVEP   TY+ L   F    ++  A  +++ +  +  G  P+ VTY V+I G  + G
Sbjct: 221 LQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKG 280

Query: 218 NVEEGLKLREVM-LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
            +E+  +L ++M LS+  K +   Y+ L++ +     +++A  LL EME  G+ P +VTY
Sbjct: 281 ELEKAAQLVDIMRLSK--KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTY 338

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + LI GL K      A   ++EM +K + P+   + +++ G C+   + +A   F  L  
Sbjct: 339 NTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKR 398

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           +     V+ YNI+IDGY +LG++  A +L  ++ E+   P + T+  L+ G C    +A 
Sbjct: 399 AGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAM 458

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
            R   D +   GLEP    Y T ++A    G I     L +EM  + I    VTY V+I 
Sbjct: 459 VRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLID 518

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLCK   L++A  L   M   G+  D +TY  +I + C+   L +A  + + M    L P
Sbjct: 519 GLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSP 578

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           +  TY I I   C  G+L  A      + E  +   +V Y  ++ A C  G    A   F
Sbjct: 579 SVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHF 638

Query: 577 CQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQG 621
            +M+E+G   +   YT                  +C M   G  PD      +   F +G
Sbjct: 639 HEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEG 698



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 3/174 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           +TG + DA  +  KM    L++   TY  L++       + +   ++D +  S    +V 
Sbjct: 522 KTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVV 581

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I I   C++  L  A  + ++   +   P+ V+ N +M   C++G  E A   F  M
Sbjct: 582 TYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEM 641

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
           L+ GL P+ ++Y +LI G C  G+   A+    +M + G+ PD  T++ L KGF
Sbjct: 642 LERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGF 695


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 257/527 (48%), Gaps = 7/527 (1%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQE--TAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           P   +T+  VI    ++  + +A+    +    GK    +V +  ++M  YC  G    A
Sbjct: 109 PEGTFTS--VITACVKEGNVAEALRLKDDMVNCGKSMNLAVAT--SLMKGYCMQGNLRSA 164

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   + + GL P+  +Y++LI G C  G++E+A EF ++M   G+     + + + +G
Sbjct: 165 LVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEG 224

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +        A+ +    L  G   ++ T+  L+   C+ G + E   L + ++++G   N
Sbjct: 225 YLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPN 283

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V++Y+ ++   C+   I+ A  +  EM   G  P+ VT++IL+ G  K+  +  A  +++
Sbjct: 284 VVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFH 343

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            M    I P     G I+ GLC+     E R  F+  +    +   + YN +IDG++K G
Sbjct: 344 RMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEG 403

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           NI  A  +YR++ E  I+PS VT+ SLI GFCK   +  A +LL+ +K  GL+     Y 
Sbjct: 404 NINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYG 463

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T ++ +C+  +++    LL E+    + P    Y  +I G      ++EA+ L + M   
Sbjct: 464 TLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNE 523

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+  D  TY ++I    K   L  A  +  +M    + P    + +LI+GLC  G  +NA
Sbjct: 524 GIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENA 583

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             +L  +   N+  + + Y T+I  H  EG++ +A     +M+++G 
Sbjct: 584 RKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGL 630



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 275/602 (45%), Gaps = 51/602 (8%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+  +N +++   +      A+ L   ML  G+  D F+ ++++      G++ EA + 
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
                  GVE D   YSI      L      A  +++++   G  P   T+T +I    +
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            GNV E L+L++ M++ G  +N+   + L+   C  G +  AL L+ E+   GL P+ VT
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           YS+LI G CK   + KA + Y+EM +K I  + ++  +IL G  + +    A   F+  +
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 242

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            S  + +V  +N ++    K G + EA  L+ ++I K ISP++V++N++I G C+   + 
Sbjct: 243 ESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNIN 301

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A ++   +  +G  P+AVT+T  M+ Y ++G+I+   ++   M+   I PT  T  ++I
Sbjct: 302 AACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIII 361

Query: 456 KGLCKQWKLQEAVQLL-----------------------------------EDMYVIGVT 480
           KGLCK  +  E   L                                     +M  +G+T
Sbjct: 362 KGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGIT 421

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P  +TY ++I  FCK  ++  A +LLN M    L+     Y  LIDG C   D+K+A  L
Sbjct: 422 PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHEL 481

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
           L  L+   +S  +  Y ++I       +V +A+  + +MV +G    ++ YT        
Sbjct: 482 LNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLK 541

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                        MLS G  PD     V++      G   +  ++   M    ++P   +
Sbjct: 542 SGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLI 601

Query: 646 IN 647
            N
Sbjct: 602 YN 603



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 239/478 (50%), Gaps = 1/478 (0%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L ++I  S    N  T S++IDG C+   ++ A  F  E   K    SV SLN+I+  Y 
Sbjct: 167 LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 226

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           K    + A  +F   L+ GL  + F++N L+  LC  G M EA    +++   G+ P+ +
Sbjct: 227 KCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVV 285

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+ +  G      I+ A KV +++L  G  P+ VT+T+L+ GY + G++E    +   M
Sbjct: 286 SYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM 345

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
                        +++  +CK+GR  E   L  +  + G  P  + Y+ +I G  K+  +
Sbjct: 346 KDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNI 405

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
           + A  +Y EMC   I+P++  + +++ G C+   I  A    + +       D+  Y  +
Sbjct: 406 NLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTL 465

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           IDG+ K  ++  A +L  +L    +SP+   +NS+I GF     V +A  L   +   G+
Sbjct: 466 IDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGI 525

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
                TYT+ ++   + G +     +  EM +K I P    +TV+I GLC + + + A +
Sbjct: 526 PCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARK 585

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           +LEDM    + P  + YNT+I    K  +L++AF+L ++M    L P + TY+IL++G
Sbjct: 586 ILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 150/577 (25%), Positives = 262/577 (45%), Gaps = 23/577 (3%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           SI +  LC +     A+  L+E     + P   +  ++++   K G    A  L   M+ 
Sbjct: 79  SIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVN 138

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G   +      L+ G C+ G++  AL   N++   G+ P+ +TYS+L  G      I  
Sbjct: 139 CGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEK 198

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A++   ++  KG    + +   ++ GY +  + +    +    L  G   NV  ++ LLS
Sbjct: 199 AFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLS 257

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CK G+++EA  L  E+ A G+ P++V+Y+ +I G C++D ++ A ++Y EM     +P
Sbjct: 258 WLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTP 317

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N+     ++ G  +K  I  A   F  +  +N +       I+I G  K G   E   L+
Sbjct: 318 NAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLF 377

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            + + +   P+ + +N++I GF K G +  A  +   +   G+ PS VTYT+ ++ +C+ 
Sbjct: 378 NKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKG 437

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
            NI   L LL +M+ K +      Y  +I G CK+  ++ A +LL ++   G++P++  Y
Sbjct: 438 NNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIY 497

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           N++I  F    ++ +A  L  +M    +     TY  LIDGL  +G L  A  +   +  
Sbjct: 498 NSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLS 557

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPP 606
             I     A+T +I   C +G    A      M  K    S+  Y               
Sbjct: 558 KGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYN-------------- 603

Query: 607 DQEICEVMLIAFH-QGGDLGSVFELAAVMIKSGLLPD 642
                   LIA H + G+L   F L   M+  GL+PD
Sbjct: 604 -------TLIAGHFKEGNLQEAFRLHDEMLDRGLVPD 633



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 182/397 (45%), Gaps = 38/397 (9%)

Query: 29  VSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILF 85
            ++ T+N+LL  L     M    +L+D++       NV + + +I G C++  +  A   
Sbjct: 247 ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKV 306

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
            +E     F P+ V+   +M  Y K G  E A  +F  M    + P   +  I+I GLC 
Sbjct: 307 YKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCK 366

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
           AG   E  +  N     G  P  + Y+ +  GF     I+ A  V +++   G  P  VT
Sbjct: 367 AGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVT 426

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           YT LI G+C+  N++  LKL   M  +G K+++ AY  L+   CK   +  A  LL E+ 
Sbjct: 427 YTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELR 486

Query: 266 AVGLKP-----------------------------------DLVTYSILIRGLCKQDKVH 290
             GL P                                   DL TY+ LI GL K  ++ 
Sbjct: 487 GAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLL 546

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A  ++ EM SK I P+  AH  ++ GLC K     AR   + +   N I  V++YN +I
Sbjct: 547 YASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLI 606

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
            G+ K GN+ EA +L+ +++++ + P  +T++ L+ G
Sbjct: 607 AGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 158/373 (42%), Gaps = 56/373 (15%)

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++P+      +L  +  K M  EAR   + +++     D    ++M+   +K GNI EA 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 364 QLYRQ--------------------------------LIEKRIS---PSIVTFNSLIYGF 388
           Q + Q                                L E R +   P   TF S+I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            K G VA+A RL D +   G   +    T+ M  YC +GN++  L L+ E+    + P  
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VTY+V+I G CK   +++A +   +M   G+     + N+I+  + KC+  + AF + N 
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
                L     T+N L+  LC  G +  A  L   +    IS   V+Y  II  HC + +
Sbjct: 241 ALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDN 299

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
           ++ A    C++ ++                ML NGF P+     +++  + + GD+ + F
Sbjct: 300 INAA----CKVYKE----------------MLDNGFTPNAVTFTILMDGYFKKGDIENAF 339

Query: 629 ELAAVMIKSGLLP 641
            +   M  + +LP
Sbjct: 340 SIFHRMKDANILP 352


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 225/411 (54%), Gaps = 3/411 (0%)

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND 158
           ++ NA+++ YC  G  + A+ L   M    + PDA++YN LI GLC  G    AL   ++
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M R    PD +TY+IL +     S    A K++ ++  KG  PDIVTY V++ G CQ G 
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           V++ ++  + + S G + N ++Y+++L  +C + R ++A  L+ EM   G  P++VT+++
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           LI  LC++  V  A+++  ++     +PNS ++  +L   C+++ + +A  + D ++   
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           C  D+V YN ++    + G +  AV+L  QL +K  +P ++++N++I G  K GK  +A 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            LL+ +   GL+P  +TY+T     C E  I+  +    +++   I P  V Y  +I GL
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           CK+ +   A+ L   M   G  P++ TY  +I        +++A  LL+++
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 232/442 (52%), Gaps = 11/442 (2%)

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
            +YN ++ G C AG ++ A     +M    VEPDA TY+ L +G     + + A  V+ +
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +L +   PD+VTYT+L+   C+    ++ +KL + M  +G   +++ Y+V+++ +C+ GR
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +D+A+  L  + + G +P+ V+Y+I+++GLC  ++   A +L  EM  K   PN      
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++  LC K ++  A    + +    C  + + YN ++  + K   + +A+     ++ + 
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
             P IV++N+L+   C++G+V  A  LL  +K  G  P  ++Y T ++   + G  +  L
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            LL EM +K + P  +TY+ +  GLC++ ++++A++    +  +G+ P+ + YN II   
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH------ 547
           CK ++   A  L   M  +   P  +TY ILI+GL   G +K A  LL  L         
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEIL 417

Query: 548 -NISLTKVAY-TTIIKAHCAEG 567
            ++ L  VA+ TT +    A G
Sbjct: 418 LDVHLIDVAFLTTFLPCSNANG 439



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 218/444 (49%), Gaps = 10/444 (2%)

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           + Y+ +  G+    Q+  A +++ ++ +   +PD  TY  LI G C  G     L + + 
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           ML +    +V+ Y++LL + CK     +A+ LL EM   G  PD+VTY++++ G+C++ +
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V  AI+    + S    PN+ ++  +L GLC  E   +A      +    C  +VV +N+
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I    + G +  A+++  Q+ +   +P+ +++N L++ FCK  K+  A   LD +   G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
             P  V+Y T + A C  G +   + LL +++ K   P  ++Y  VI GL K  K +EA+
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +LL +M   G+ PD ITY+TI    C+   +  A +   ++    + P +  YN +I GL
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C   +  +A  L   +  +     +  YT +I+    EG + +A     ++  +  E  +
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEIL 417

Query: 589 RD-------YTKSFFCMMLSNGFP 605
            D       +  +F     +NG P
Sbjct: 418 LDVHLIDVAFLTTFLPCSNANGGP 441



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 206/390 (52%), Gaps = 2/390 (0%)

Query: 56  VSETP--RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           V+E P   + YT + +I GLC + R  +A+  L E   +   P VV+   ++   CK   
Sbjct: 23  VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSG 82

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            + A  L   M   G  PD  +YN++++G+C  G +++A+EF  ++  +G EP+ ++Y+I
Sbjct: 83  YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 142

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           + KG     +   A +++ ++  KG  P++VT+ +LI   C+ G VE  L++ E +   G
Sbjct: 143 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 202

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              N ++Y+ LL + CK  ++D+A+  L  M + G  PD+V+Y+ L+  LC+  +V  A+
Sbjct: 203 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 262

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           +L +++  K  +P   ++  ++ GL +     EA    + ++      D++ Y+ +  G 
Sbjct: 263 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 322

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            +   I +A++ + ++ +  I P+ V +N++I G CK  +   A  L   +  +G  P+ 
Sbjct: 323 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 382

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
            TYT  +     EG I+    LL E+ ++A
Sbjct: 383 STYTILIEGLAYEGLIKEARDLLDELCSRA 412



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 197/406 (48%), Gaps = 3/406 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++ G C   +L  A   + E       P   + N ++   C  G    A  +   ML+  
Sbjct: 6   MVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR 62

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  +Y IL+   C     ++A++  ++M   G  PD +TY+++  G     ++  A 
Sbjct: 63  CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 122

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           + ++ L   G +P+ V+Y +++ G C     E+  +L   M  +G   NV+ +++L+S +
Sbjct: 123 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 182

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C+ G ++ AL +L ++   G  P+ ++Y+ L+   CKQ K+ KA+   + M S+   P+ 
Sbjct: 183 CRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI 242

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
            ++  +L  LC    +  A      L    C   ++ YN +IDG  K G   EA++L  +
Sbjct: 243 VSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 302

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           ++ K + P I+T++++  G C+  ++ DA R    ++  G+ P+ V Y   +   C+   
Sbjct: 303 MVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 362

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
               + L   M      P   TYT++I+GL  +  ++EA  LL+++
Sbjct: 363 THSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 178/323 (55%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L D+++      ++ T ++V++G+CQ+ R+ DAI FL+        P+ VS N ++   C
Sbjct: 89  LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 148

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
                E A+ L   M + G  P+  ++N+LI  LC  G +E ALE    + ++G  P+++
Sbjct: 149 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 208

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+ L   F    ++  A   +  ++ +G  PDIV+Y  L+   C+ G V+  ++L   +
Sbjct: 209 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 268

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
             +G    +I+Y+ ++  + K+G+  EAL LL EM + GL+PD++TYS +  GLC++D++
Sbjct: 269 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 328

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             AI+ + ++    I PN+  + AI+LGLC++     A   F  +I + C+ +   Y I+
Sbjct: 329 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 388

Query: 350 IDGYVKLGNIGEAVQLYRQLIEK 372
           I+G    G I EA  L  +L  +
Sbjct: 389 IEGLAYEGLIKEARDLLDELCSR 411



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 113/264 (42%), Gaps = 32/264 (12%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           ML     R G+V  A+ V+ ++ +     +  +YN LL+                     
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLH--------------------- 215

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
                        C+Q ++  A+ FL     +   P +VS N +++  C+ G  +VA  L
Sbjct: 216 -----------AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 264

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              +   G  P   SYN +I GL  AG  +EALE  N+M   G++PD ITYS +A G   
Sbjct: 265 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 324

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +I  A +   K+   G  P+ V Y  +I G C+       + L   M+  G   N   
Sbjct: 325 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNEST 384

Query: 241 YSVLLSSMCKSGRIDEALGLLYEM 264
           Y++L+  +   G I EA  LL E+
Sbjct: 385 YTILIEGLAYEGLIKEARDLLDEL 408



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 9/188 (4%)

Query: 22  MKELDLKVS------IQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDG 72
           M  LDL VS      I +YN+LL  L  +   D+  +L   +K       + + + VIDG
Sbjct: 227 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 286

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           L +  + ++A+  L E   K   P +++ + I +  C+    E A   F  +   G+ P+
Sbjct: 287 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 346

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
              YN +I GLC       A++    M  +G  P+  TY+IL +G      I  A  ++ 
Sbjct: 347 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLD 406

Query: 193 KLLIKGSD 200
           +L  +  +
Sbjct: 407 ELCSRAGE 414


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 257/527 (48%), Gaps = 7/527 (1%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQE--TAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           P   +T+  VI    ++  + +A+    +    GK    +V +  ++M  YC  G    A
Sbjct: 227 PEGTFTS--VITACVKEGNVAEALRLKDDMVNCGKSMNLAVAT--SLMKGYCMQGNLRSA 282

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   + + GL P+  +Y++LI G C  G++E+A EF ++M   G+     + + + +G
Sbjct: 283 LVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEG 342

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +        A+ +    L  G   ++ T+  L+   C+ G + E   L + ++++G   N
Sbjct: 343 YLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPN 401

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V++Y+ ++   C+   I+ A  +  EM   G  P+ VT++IL+ G  K+  +  A  +++
Sbjct: 402 VVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFH 461

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            M    I P     G I+ GLC+     E R  F+  +    +   + YN +IDG++K G
Sbjct: 462 RMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEG 521

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           NI  A  +YR++ E  I+PS VT+ SLI GFCK   +  A +LL+ +K  GL+     Y 
Sbjct: 522 NINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYG 581

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T ++ +C+  +++    LL E+    + P    Y  +I G      ++EA+ L + M   
Sbjct: 582 TLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNE 641

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+  D  TY ++I    K   L  A  +  +M    + P    + +LI+GLC  G  +NA
Sbjct: 642 GIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENA 701

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
             +L  +   N+  + + Y T+I  H  EG++ +A     +M+++G 
Sbjct: 702 RKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGL 748



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 239/478 (50%), Gaps = 1/478 (0%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L ++I  S    N  T S++IDG C+   ++ A  F  E   K    SV SLN+I+  Y 
Sbjct: 285 LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 344

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           K    + A  +F   L+ GL  + F++N L+  LC  G M EA    +++   G+ P+ +
Sbjct: 345 KCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVV 403

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+ +  G      I+ A KV +++L  G  P+ VT+T+L+ GY + G++E    +   M
Sbjct: 404 SYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM 463

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
                        +++  +CK+GR  E   L  +  + G  P  + Y+ +I G  K+  +
Sbjct: 464 KDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNI 523

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
           + A  +Y EMC   I+P++  + +++ G C+   I  A    + +       D+  Y  +
Sbjct: 524 NLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTL 583

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           IDG+ K  ++  A +L  +L    +SP+   +NS+I GF     V +A  L   +   G+
Sbjct: 584 IDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGI 643

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
                TYT+ ++   + G +     +  EM +K I P    +TV+I GLC + + + A +
Sbjct: 644 PCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARK 703

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           +LEDM    + P  + YNT+I    K  +L++AF+L ++M    L P + TY+IL++G
Sbjct: 704 ILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 246/536 (45%), Gaps = 51/536 (9%)

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            GVE D   YSI      L      A  +++++   G  P   T+T +I    + GNV E
Sbjct: 187 RGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAE 246

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            L+L++ M++ G  +N+   + L+   C  G +  AL L+ E+   GL P+ VTYS+LI 
Sbjct: 247 ALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLID 306

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           G CK   + KA + Y+EM +K I  + ++  +IL G  + +    A   F+  + S  + 
Sbjct: 307 GCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG-LA 365

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           +V  +N ++    K G + EA  L+ ++I K ISP++V++N++I G C+   +  A ++ 
Sbjct: 366 NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVY 425

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +  +G  P+AVT+T  M+ Y ++G+I+   ++   M+   I PT  T  ++IKGLCK 
Sbjct: 426 KEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKA 485

Query: 462 WKLQEAVQLL-----------------------------------EDMYVIGVTPDQITY 486
            +  E   L                                     +M  +G+TP  +TY
Sbjct: 486 GRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTY 545

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
            ++I  FCK  ++  A +LLN M    L+     Y  LIDG C   D+K+A  LL  L+ 
Sbjct: 546 TSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRG 605

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------------- 592
             +S  +  Y ++I       +V +A+  + +MV +G    ++ YT              
Sbjct: 606 AGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLY 665

Query: 593 -KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                  MLS G  PD     V++      G   +  ++   M    ++P   + N
Sbjct: 666 ASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYN 721



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 152/564 (26%), Positives = 256/564 (45%), Gaps = 49/564 (8%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+  D  +Y+I +H LC+  +   AL    +M   G  P   T++ +         ++ A
Sbjct: 188 GVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEA 247

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            ++   ++  G   ++   T L+ GYC  GN+   L L   +   G   N + YSVL+  
Sbjct: 248 LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDG 307

Query: 248 MCKSGRIDEALGLLYEMEAVGLKP----------------------------------DL 273
            CK+G I++A     EM+  G++                                   ++
Sbjct: 308 CCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANV 367

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            T++ L+  LCK+ K+++A  L++E+ +K ISPN  ++  I+LG C K+ I  A   +  
Sbjct: 368 FTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKE 427

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++ +    + V + I++DGY K G+I  A  ++ ++ +  I P+  T   +I G CK G+
Sbjct: 428 MLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGR 487

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
             + R L +     G  P+ + Y T ++ + +EGNI     + +EM    I P+ VTYT 
Sbjct: 488 SFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTS 547

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I G CK   +  A++LL DM   G+  D   Y T+I  FCK +D++ A +LLN++    
Sbjct: 548 LIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAG 607

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           L P    YN +I G     +++ A  L   +    I      YT++I      G +  A 
Sbjct: 608 LSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYAS 667

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVM--------------LIAFH 619
               +M+ KG     R +T     +     F   ++I E M              LIA H
Sbjct: 668 DIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGH 727

Query: 620 -QGGDLGSVFELAAVMIKSGLLPD 642
            + G+L   F L   M+  GL+PD
Sbjct: 728 FKEGNLQEAFRLHDEMLDRGLVPD 751



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 182/397 (45%), Gaps = 38/397 (9%)

Query: 29  VSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILF 85
            ++ T+N+LL  L     M    +L+D++       NV + + +I G C++  +  A   
Sbjct: 365 ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKV 424

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
            +E     F P+ V+   +M  Y K G  E A  +F  M    + P   +  I+I GLC 
Sbjct: 425 YKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCK 484

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
           AG   E  +  N     G  P  + Y+ +  GF     I+ A  V +++   G  P  VT
Sbjct: 485 AGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVT 544

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           YT LI G+C+  N++  LKL   M  +G K+++ AY  L+   CK   +  A  LL E+ 
Sbjct: 545 YTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELR 604

Query: 266 AVGLKP-----------------------------------DLVTYSILIRGLCKQDKVH 290
             GL P                                   DL TY+ LI GL K  ++ 
Sbjct: 605 GAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLL 664

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A  ++ EM SK I P+  AH  ++ GLC K     AR   + +   N I  V++YN +I
Sbjct: 665 YASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLI 724

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
            G+ K GN+ EA +L+ +++++ + P  +T++ L+ G
Sbjct: 725 AGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 116/482 (24%), Positives = 194/482 (40%), Gaps = 84/482 (17%)

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           Q GN+ E  +      ++G +L+  AYS+ +  +C       AL LL EM A G  P   
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           T++ +I    K+  V +A++L ++M +                 C K M           
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVN-----------------CGKSM----------- 261

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                  ++ +   ++ GY   GN+  A+ L  ++ E  + P+ VT++ LI G CKNG +
Sbjct: 262 -------NLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNI 314

Query: 395 ADARRLLDTIKLHGLEPS----------------------------------AVTYTTFM 420
             A      +K  G+  S                                    T+ T +
Sbjct: 315 EKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLL 374

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C+EG +     L  E+  K I P  V+Y  +I G C++  +  A ++ ++M   G T
Sbjct: 375 SWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFT 434

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ +T+  ++  + K  D+  AF + ++M   N+ PT  T  I+I GLC  G       L
Sbjct: 435 PNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDL 494

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM 598
                      T + Y TII     EG+++ A   + +M E G   S   YT     FC 
Sbjct: 495 FNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCK 554

Query: 599 -------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                        M   G   D +    ++  F +  D+ S  EL   +  +GL P++F+
Sbjct: 555 GNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFI 614

Query: 646 IN 647
            N
Sbjct: 615 YN 616



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 155/362 (42%), Gaps = 38/362 (10%)

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           +R  C  D++ +  +LYN        P     G IL          EA  +F        
Sbjct: 147 VRFSCLMDRLVECTKLYN-------FPLDIQEGNIL----------EAEQHFLQAKARGV 189

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             D   Y+I +       N G A+ L R++      P   TF S+I    K G VA+A R
Sbjct: 190 ELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALR 249

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L D +   G   +    T+ M  YC +GN++  L L+ E+    + P  VTY+V+I G C
Sbjct: 250 LKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCC 309

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K   +++A +   +M   G+     + N+I+  + KC+  + AF + N      L     
Sbjct: 310 KNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVF 368

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           T+N L+  LC  G +  A  L   +    IS   V+Y  II  HC + +++ A    C++
Sbjct: 369 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAA----CKV 424

Query: 580 VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
            ++                ML NGF P+     +++  + + GD+ + F +   M  + +
Sbjct: 425 YKE----------------MLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468

Query: 640 LP 641
           LP
Sbjct: 469 LP 470


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 237/445 (53%), Gaps = 1/445 (0%)

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           L++  C AG   E+L F   +   G +PD +  + L KGF     +  A +V++ L   G
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
            DPD+ +Y  +I G+ +   ++   ++ + M S+GF  +V+ Y++++ S+C  G+++ A 
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            ++ E+   G KP ++TY+ILI     + ++++A++L++E+ S+ + P+ + + AI+ G+
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++ M   A  +   L    C  DVV YNI++  ++      +  +L + ++     P++
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VT + LI  FC+ G+V +A  +L+ +K  GL P + +Y   ++A+C+EG +   +  L++
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEK 366

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M +    P  V Y  ++  LCK      A+ + E +  +G  P    YNT+  +   C +
Sbjct: 367 MVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGN 426

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
             KA +++++M    ++P   TYN LI  LC +G +  A  LLV ++      T +++  
Sbjct: 427 KIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNI 486

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKG 583
           ++   C    V + +     MVEKG
Sbjct: 487 VLLGMCKAHRVFEGIELLITMVEKG 511



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 230/444 (51%), Gaps = 5/444 (1%)

Query: 69  VIDGLCQQSRLQDAILFLQ--ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I G      L+ A+  ++  ET G    P V S NA++S + K    + A  +F  M  
Sbjct: 103 LIKGFFNSRNLKKAMRVMEILETYGD---PDVYSYNAMISGFSKANQIDSANQVFDRMRS 159

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD  +YNI+I  LC  G +E A E  +++ + G +P  ITY+IL +   L  +I+ 
Sbjct: 160 RGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINE 219

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A ++  +L+ +G  PD+ TY  +I G C+ G  +  L     + ++G   +V++Y++LL 
Sbjct: 220 ALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLR 279

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           S     R ++   L+ +M   G +P++VT+SILI   C++ +V +A+ +   M  K ++P
Sbjct: 280 SFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTP 339

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +S+++  ++   C++  +  A  Y + ++   C+ D+V YN ++    K G    A+ ++
Sbjct: 340 DSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVF 399

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            +L E    P++  +N++       G    A  ++  +   G++P  +TY + ++  C +
Sbjct: 400 EKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRD 459

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +   + LL +ME     PT +++ +V+ G+CK  ++ E ++LL  M   G  P++ +Y
Sbjct: 460 GLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSY 519

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMW 510
             +I          +A +L N ++
Sbjct: 520 VLLIEGIAYAGWRAEAMELANSLY 543



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 217/459 (47%), Gaps = 1/459 (0%)

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           C+  +  +++ FL+    K F P VV    ++  +      + A  +  ++  YG  PD 
Sbjct: 73  CRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDV 131

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
           +SYN +I G   A  ++ A +  + M   G  PD +TY+I+        ++  A++V+ +
Sbjct: 132 YSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDE 191

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           LL  G  P ++TYT+LI      G + E L+L + ++S+G + ++  Y+ ++  +CK G 
Sbjct: 192 LLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGM 251

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
            D AL  +  + A G  PD+V+Y+IL+R    + +     +L  +M      PN   H  
Sbjct: 252 EDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSI 311

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++   C +  + EA    + +       D   Y+ +I  + K G +  A++   +++   
Sbjct: 312 LISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDG 371

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
             P IV +N+++   CK G    A  + + +   G  P+   Y T  +A    GN  + L
Sbjct: 372 CLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKAL 431

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            ++ EM  K I P  +TY  +I  LC+   + EA+ LL DM      P  I++N ++   
Sbjct: 432 EMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGM 491

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           CK   + +  +LL  M      P   +Y +LI+G+   G
Sbjct: 492 CKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAG 530



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 208/418 (49%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +VY+ + +I G  + +++  A         + F P VV+ N ++   C  G  E+A  + 
Sbjct: 130 DVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVM 189

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +LK G  P   +Y ILI    + G + EALE  +++   G+ PD  TY+ + +G    
Sbjct: 190 DELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKE 249

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
                A   ++ L  +G +PD+V+Y +L+  +      E+G +L + M+  G + NV+ +
Sbjct: 250 GMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTH 309

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S+L+SS C+ GR+ EA+ +L  M+  GL PD  +Y  LI   CK+ ++  AI+   +M S
Sbjct: 310 SILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS 369

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               P+   +  IL  LC+      A   F+ L    C   V  YN M       GN  +
Sbjct: 370 DGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIK 429

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+++  ++I K I P  +T+NSLI   C++G V +A  LL  ++    +P+ +++   + 
Sbjct: 430 ALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLL 489

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
             C+   +   + LL  M  K   P   +Y ++I+G+       EA++L   +Y +GV
Sbjct: 490 GMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGV 547



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 185/419 (44%), Gaps = 51/419 (12%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           LL+  C++G+ +E+L  L  + + G KPD+V  + LI+G      + KA+++        
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVME------ 121

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
                               I E   Y D         DV  YN MI G+ K   I  A 
Sbjct: 122 --------------------ILET--YGDP--------DVYSYNAMISGFSKANQIDSAN 151

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           Q++ ++  +  SP +VT+N +I   C  GK+  A  ++D +   G +PS +TYT  + A 
Sbjct: 152 QVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEAT 211

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
             EG I   L L  E+ ++ + P   TY  +I+G+CK+     A+  +  +   G  PD 
Sbjct: 212 ILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDV 271

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           ++YN ++RSF          +L+  M L   EP   T++ILI   C  G ++ A  +L  
Sbjct: 272 VSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEV 331

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------SFFC 597
           ++E  ++    +Y  +I A C EG +  A+ +  +MV  G    I +Y         F C
Sbjct: 332 MKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGC 391

Query: 598 MMLS---------NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             L+          G PP       M  A    G+     E+ + MI+ G+ PD+   N
Sbjct: 392 ADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYN 450



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 157/321 (48%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +L+D++       ++YT + +I G+C++     A+ F++  + +   P VVS N ++  +
Sbjct: 222 ELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSF 281

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
                 E  + L   M+  G  P+  +++ILI   C  G + EA+     M   G+ PD+
Sbjct: 282 LNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDS 341

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
            +Y  L   F    ++  A + ++K++  G  PDIV Y  ++   C+ G  +  L + E 
Sbjct: 342 YSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEK 401

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           +   G    V AY+ + S++   G   +AL ++ EM   G+ PD +TY+ LI  LC+   
Sbjct: 402 LDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGL 461

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V +AI L  +M + R  P   +   +LLG+C+   + E      +++   C+ +   Y +
Sbjct: 462 VDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVL 521

Query: 349 MIDGYVKLGNIGEAVQLYRQL 369
           +I+G    G   EA++L   L
Sbjct: 522 LIEGIAYAGWRAEAMELANSL 542



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 3/176 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPR 61
            + + G +  A+  + KM        I  YN++L  L      D+  D+++ +     P 
Sbjct: 350 AFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPP 409

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V   + +   L        A+  + E   K   P  ++ N+++S  C+ G  + A GL 
Sbjct: 410 TVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLL 469

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             M      P   S+NI++ G+C A  + E +E    M   G  P+  +Y +L +G
Sbjct: 470 VDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEG 525


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 256/531 (48%), Gaps = 16/531 (3%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
           VY + G+   AV +  ++KE     S++ YN +L  L       +++ +Y D+K      
Sbjct: 120 VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEP 179

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV+T ++++  LC+ +++  A   L E + K   P  VS   ++S  C++G  +  + L 
Sbjct: 180 NVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL- 238

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
                    P    YN LI+GLC     + A E   +M   G+ P+ I+YS L       
Sbjct: 239 ----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNS 294

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--NVI 239
            QI  A+  + ++L +G  P+I T + L+ G    G   + L L   M+ +GF L  NV+
Sbjct: 295 GQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGFGLQPNVV 353

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           AY+ L+   C  G I +A+ +   ME +G  P++ TY  LI G  K+  +  A+ ++N+M
Sbjct: 354 AYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            +    PN   +  ++  LC      EA    + +   NC   V  +N  I G    G +
Sbjct: 414 LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 473

Query: 360 GEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             A +++RQ+ ++ R  P+IVT+N L+ G  K  ++ +A  L   I + G+E S+ TY T
Sbjct: 474 DWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNT 533

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++  C  G     L L+ +M      P  +T  ++I   CKQ K + A Q+L D+   G
Sbjct: 534 LLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCG 592

Query: 479 ---VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
                PD I+Y  +I   C+         LL +M    + P+ AT+++LI+
Sbjct: 593 RRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 143/572 (25%), Positives = 262/572 (45%), Gaps = 34/572 (5%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T  ++I  L    ++      LQ+   + F  S     +++S Y ++G AE A  +F  +
Sbjct: 78  TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            ++G  P    YN ++  L     ++       DM R G EP+  TY++L K     +++
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV---------------- 228
            GA K++ ++  KG  PD V+YT +I   C++G V+EG +L E                 
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLC 257

Query: 229 --------------MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
                         M+ +G   NVI+YS L++ +C SG+I+ A   L +M   G  P++ 
Sbjct: 258 KEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIY 317

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSK-RISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           T S L++G   +     A+ L+N+M     + PN  A+  ++ G C    I +A   F  
Sbjct: 318 TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSH 377

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +    C  ++  Y  +I+G+ K G++  AV ++ +++     P++V + +++   C++ K
Sbjct: 378 MEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH-VTYT 452
             +A  L++ +      PS  T+  F+   C+ G +     + ++ME +   P + VTY 
Sbjct: 438 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYN 497

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            ++ GL K  +++EA  L  ++++ GV     TYNT++   C       A QL+ +M + 
Sbjct: 498 ELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCL--LVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              P   T N++I   C  G  + A  +  LVS          ++YT +I   C      
Sbjct: 558 GKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCRE 617

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
             +    +M+  G   SI  ++    C +L +
Sbjct: 618 DGVILLERMISAGIVPSIATWSVLINCFILDD 649



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/507 (22%), Positives = 223/507 (43%), Gaps = 59/507 (11%)

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +T+ ++ +   +  Q+     ++Q++ ++G       +  +I  Y Q+G  E  +++   
Sbjct: 77  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           +   G   +V  Y+ +L ++    RI     +  +M+  G +P++ TY++L++ LCK +K
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV-LYN 347
           V  A +L  EM +K   P++ ++  ++  +CE  ++ E R   +        + VV +YN
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF------EPVVSVYN 250

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL------ 401
            +I+G  K  +   A +L R+++EK ISP+++++++LI   C +G++  A   L      
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310

Query: 402 ------------------------------DTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
                                           I+  GL+P+ V Y T +  +C  GNI +
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            +++   ME     P   TY  +I G  K+  L  AV +   M   G  P+ + Y  ++ 
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL-QEHNIS 550
           + C+    ++A  L+  M   N  P+  T+N  I GLC  G L  A+ +   + Q+H   
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SF 595
              V Y  ++        + +A     ++  +G E S   Y                   
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 550

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGG 622
              M+ +G  PD+    ++++A+ + G
Sbjct: 551 VGKMMVDGKSPDEITMNMIILAYCKQG 577



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 146/292 (50%), Gaps = 6/292 (2%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTN 66
           G +  AV V + M+E+    +I+TY SL+         D    +++ +  S    NV   
Sbjct: 366 GNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVY 425

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM-L 125
           + +++ LC+ S+ ++A   ++  + +   PSV + NA +   C  G  + A+ +F  M  
Sbjct: 426 TNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           ++   P+  +YN L+ GL  A  +EEA   T ++   GVE  + TY+ L  G        
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPG 545

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML--SQGFKLNVIAYSV 243
            A +++ K+++ G  PD +T  ++I  YC+ G  E   ++ +++    + ++ +VI+Y+ 
Sbjct: 546 IALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTN 605

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           ++  +C+S   ++ + LL  M + G+ P + T+S+LI      D V    Q 
Sbjct: 606 VIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIVRAHDQF 657



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/231 (20%), Positives = 92/231 (39%), Gaps = 25/231 (10%)

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + +T+   +     +G +  +  LLQ+M+ +    +   +  VI    +    + AV++ 
Sbjct: 75  TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMF 134

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
             +   G  P    YN ++ +      ++  + +   M     EP   TYN+L+  LC N
Sbjct: 135 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 194

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
             +  A  LLV +         V+YTT+I + C  G           +V++G E++ R  
Sbjct: 195 NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG-----------LVKEGRELAER-- 241

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                       F P   +   ++    +  D    FEL   M++ G+ P+
Sbjct: 242 ------------FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPN 280


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 266/543 (48%), Gaps = 24/543 (4%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           NA+++ YC+ G    A+    L     + P+A++Y  L+  LC  G + +AL   +DM R
Sbjct: 83  NAMVAGYCRAGQLAAARR---LAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMAR 139

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            G  P    Y +  +     S   GA  V++ L  +G   D+    +++   C  G V+E
Sbjct: 140 RGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDE 199

Query: 222 GLK-LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
            ++ LR+++ S G + +V++Y+ +L  +C + R      L+ EM A G  P++VT+S LI
Sbjct: 200 AVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLI 259

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
             LC+     +  +++ +M     +P+   +  I+ G+C++E +  AR   + +      
Sbjct: 260 GHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLS 319

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            +VV YN ++ G        EA  L  ++ +K      VTFN L+   C+NG V     +
Sbjct: 320 PNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEV 379

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L+ +  HG  P  +TYTT +N +C+EG I   + LL+ M      P  V+YT+V+KGLC 
Sbjct: 380 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCS 439

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             +  +A +L+  M   G  P+ +T+NT+I   CK   + +A +LL QM ++   P   +
Sbjct: 440 AERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 499

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y+ +IDGL   G+   A  LL  + +  +S   + Y++I  A   EG ++K +    QM 
Sbjct: 500 YSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVI----QMF 555

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           E   + ++R                 D  +   ++ +  + G+     E  A M+ SG +
Sbjct: 556 ENIQDTTVRS----------------DAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCV 599

Query: 641 PDK 643
           P++
Sbjct: 600 PNE 602



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 251/523 (47%), Gaps = 1/523 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N YT   ++  LC + R+ DA+  L + A +   P+    +  +   C+      A G+ 
Sbjct: 110 NAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVL 169

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHL 180
             +   G   D  + N+++  +C  G ++EA+    D+    G EPD ++Y+ + +G  +
Sbjct: 170 RDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCM 229

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +      ++++++  G  P+IVT++ LI   C+ G  E   ++   M   G   +V  
Sbjct: 230 ARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRM 289

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ ++  +CK  R++ A G+L  M + GL P++V Y+ L++GLC  D+  +A  L  EM 
Sbjct: 290 YATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMF 349

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K    +      ++  LC+  ++       + ++   C+ DV+ Y  +I+G+ K G I 
Sbjct: 350 DKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLID 409

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EAV L R +      P+ V++  ++ G C   +  DA  L+  +   G  P+ VT+ T +
Sbjct: 410 EAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLI 469

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N  C++G +++ + LL++M      P  ++Y+ VI GL K     EA++LL  M   G++
Sbjct: 470 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMS 529

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ I Y++I  +      + K  Q+   +    +   +  YN +I  LC  G+   A   
Sbjct: 530 PNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEF 589

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L  +        +  YT +I+   +EG V +A     ++  KG
Sbjct: 590 LAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 224/469 (47%), Gaps = 39/469 (8%)

Query: 10  GMVHDAVFVIAKM-KELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYT 65
           G V +AV ++  +      +  + +YN++L  L   R    + DL +++  +  P N+ T
Sbjct: 195 GPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVT 254

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            S +I  LC+    +       + A     P V     I+   CK    EVA+G+   M 
Sbjct: 255 FSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMP 314

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
            YGL P+   YN L+ GLC A   EEA     +M       D +T++IL         + 
Sbjct: 315 SYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVD 374

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
              +V++++L  G  PD++TYT +I G+C+ G ++E + L   M + G + N ++Y+++L
Sbjct: 375 RVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVL 434

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +C + R  +A  L+ +M   G  P+ VT++ LI  LCK+  V +AI+L  +M      
Sbjct: 435 KGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM------ 488

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
                                        +++ C  D++ Y+ +IDG  K GN  EA++L
Sbjct: 489 -----------------------------LVNGCSPDLISYSTVIDGLGKAGNTDEALEL 519

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
              +++K +SP+ + ++S+       G++    ++ + I+   +   AV Y   +++ C+
Sbjct: 520 LNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCK 579

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            G   R +  L  M +    P   TYT++I+GL  +  ++EA ++L ++
Sbjct: 580 RGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTEL 628



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 201/446 (45%), Gaps = 21/446 (4%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P+  TY  L+   C  G + + L + + M  +G       Y V L + C++     A+G+
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC-SKRISPNSFAHGAILLGLC 319
           L ++   G   D+   +++++ +C Q  V +A++L  ++  S    P+  ++ A+L GLC
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLC 228

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
                   +   + ++ + C  ++V ++ +I    + G      +++ Q+ E   +P + 
Sbjct: 229 MARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVR 288

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
            + ++I G CK  ++  AR +L+ +  +GL P+ V Y T +   C     +    LL EM
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM 348

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
             K      VT+ +++  LC+   +   +++LE M   G  PD ITY T+I  FCK   +
Sbjct: 349 FDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLI 408

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
            +A  LL  M      P + +Y I++ GLC      +A+ L+  + +       V + T+
Sbjct: 409 DEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTL 468

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
           I   C +G V +A+    Q                    ML NG  PD      ++    
Sbjct: 469 INFLCKKGLVEQAIELLKQ--------------------MLVNGCSPDLISYSTVIDGLG 508

Query: 620 QGGDLGSVFELAAVMIKSGLLPDKFL 645
           + G+     EL  VM+K G+ P+  +
Sbjct: 509 KAGNTDEALELLNVMVKKGMSPNTII 534


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 228/444 (51%), Gaps = 10/444 (2%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-- 159
           N++++   + G       L   M++  + P+  ++ ILI+ +C    +++ALE    M  
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSG 368

Query: 160 GRHG------VEPDAITYSILAKGFHLLSQISGAWKVIQKLLI-KGSDPDIVTYTVLICG 212
           G+        VEPD + Y+ L  G   + +      +++++   KG  PD +TY  LI G
Sbjct: 369 GKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDG 428

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           +C+ G +E+G +L + M  +G   NV+  + L+  MC++GR+  A+    E +  G+K D
Sbjct: 429 FCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGD 488

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
            VTY+ LI   C  +   KA++L+NEM     SP++  +  ++ G  +   + +A     
Sbjct: 489 AVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLA 548

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            L       D V YN +I G+ +        ++ +++ E  + P  +T+N+LI    KNG
Sbjct: 549 ELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNG 608

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA-IGPTHVTY 451
            +  A++++  +   G+ P+  TY   +NAYC  GN    + + ++M+  + + P  V Y
Sbjct: 609 DLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIY 668

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            ++I  LCK  K++ AV L+EDM + GVTP+  TYN I +     KDL K F+ +++M  
Sbjct: 669 NILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIE 728

Query: 512 HNLEPTSATYNILIDGLCVNGDLK 535
           H   P   T  IL + L   G+++
Sbjct: 729 HACNPDYITMEILTEWLSAVGEIE 752



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 145/582 (24%), Positives = 276/582 (47%), Gaps = 25/582 (4%)

Query: 23  KELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRL 79
           KEL++ +++   + LL     ++++ +   L++D+  S   +N Y  ++ +  L +  R+
Sbjct: 149 KELNIPLTVNAASFLLRASGRSELVEESLILFNDLDPS--VKNTYLRNVWLSILLRSGRV 206

Query: 80  QDAILFLQE----TAGKEFGPSVVSLNAIMSRYCKLGFAE---VAKGLFCLMLKYGLHP- 131
           +DA+  + E           P+  + + + S   K    E       +  L+LK+G H  
Sbjct: 207 KDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGV 266

Query: 132 --DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
              +F    LI  LC         +   +M + G   ++   + L  G       +   +
Sbjct: 267 LISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNE 326

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM--------LSQGFKLNVIAY 241
           +++K++     P++VT+ +LI   C+   V++ L++ E M        +S   + +V+ Y
Sbjct: 327 LMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIY 386

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEA-VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           + L+  +CK GR  E LGL+  M +  G  PD +TY+ LI G CK  ++ K  +L++EM 
Sbjct: 387 NTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMN 446

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            + ++PN      ++ G+C    ++ A  +F          D V Y  +I+ +  + N  
Sbjct: 447 KEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFE 506

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A++L+ ++++   SP  + + +LI GF + G++ADA  +L  +K  G+ P  V Y T +
Sbjct: 507 KAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLI 566

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             +C      R+  +L+EME   + P  +TY  +I    K   L+ A +++  M   GV 
Sbjct: 567 GGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVV 626

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQM-WLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           P   TY  +I ++C   +  +A ++   M     + P +  YNILI+ LC N  +K+A  
Sbjct: 627 PTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVS 686

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           L+  ++   ++     Y  I K    E D+ K   F  +M+E
Sbjct: 687 LMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIE 728



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 260/552 (47%), Gaps = 21/552 (3%)

Query: 41  LRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSR-----LQDAILFLQETAGKEFG 95
           L+  D M++  DD   S    N  T  I+   L ++ R      +D I+ L    G E G
Sbjct: 210 LKVIDEMFESNDD---SNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFG-EHG 265

Query: 96  PSVVS--LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
             + S  +  +++R C+         LF  M+K G   ++ + N L+ GL   G+     
Sbjct: 266 VLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMN 325

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL--------LIKGSDPDIVT 205
           E    M    ++P+ +T+ IL        ++  A +V++K+        +    +PD+V 
Sbjct: 326 ELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVI 385

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQ-GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           Y  LI G C++G  +EGL L E M SQ G   + I Y+ L+   CK+G I++   L  EM
Sbjct: 386 YNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEM 445

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              G+ P++VT + L+ G+C+  +V  A+  + E   + +  ++  + A++   C     
Sbjct: 446 NKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNF 505

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            +A   F+ ++ S C  D ++Y  +I G+ + G + +A  +  +L +  I P  V +N+L
Sbjct: 506 EKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTL 565

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I GFC+  K      +L  ++  GL+P  +TY T +    + G+++    ++++M    +
Sbjct: 566 IGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGV 625

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-VTPDQITYNTIIRSFCKCKDLRKAF 503
            PT  TY  VI   C      EA+++ +DM     V P+ + YN +I S CK   ++ A 
Sbjct: 626 VPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAV 685

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L+  M +  + P + TYN +  GL    DL+     +  + EH  +   +    + +  
Sbjct: 686 SLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWL 745

Query: 564 CAEGDVHKAMTF 575
            A G++ +   F
Sbjct: 746 SAVGEIERLKKF 757



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 204/443 (46%), Gaps = 20/443 (4%)

Query: 9   TGMVHDAVF-----VIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDD------- 53
           TG+  +  F     ++ KM E+D++ ++ T+  L+ ++   R  D   ++ +        
Sbjct: 313 TGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKES 372

Query: 54  --IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE-TAGKEFGPSVVSLNAIMSRYCK 110
             I VS  P  V  N++ IDGLC+  R Q+ +  ++   + K   P  ++ N ++  +CK
Sbjct: 373 GGISVSVEPDVVIYNTL-IDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCK 431

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
            G  E  K LF  M K G+ P+  + N L+ G+C  G +  A+ F  +  R G++ DA+T
Sbjct: 432 AGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVT 491

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y+ L   F  ++    A ++  ++L  G  PD + Y  LI G+ Q G + +   +   + 
Sbjct: 492 YTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELK 551

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
             G + + + Y+ L+   C++ +      +L EME  GLKPD +TY+ LI    K   + 
Sbjct: 552 KLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLK 611

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA-RMYFDSLIMSNCIQDVVLYNIM 349
            A ++  +M    + P    +GA++   C      EA  ++ D    S    + V+YNI+
Sbjct: 612 FAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNIL 671

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           I+   K   +  AV L   +    ++P+  T+N++  G      +      +D +  H  
Sbjct: 672 INSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHAC 731

Query: 410 EPSAVTYTTFMNAYCEEGNIQRL 432
            P  +T           G I+RL
Sbjct: 732 NPDYITMEILTEWLSAVGEIERL 754



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 204/486 (41%), Gaps = 79/486 (16%)

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI   C+      G  L   M+  G  L   A + LL+ + + G  +    L+ +M  + 
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           ++P++VT+ ILI  +CK  +V  A+++  +M   + S      G I + +          
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKES------GGISVSV---------- 379

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY-RQLIEKRISPSIVTFNSLIYG 387
                        DVV+YN +IDG  K+G   E + L  R   +K  +P  +T+N LI G
Sbjct: 380 -----------EPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDG 428

Query: 388 FCKNGKVADARRLLDTIKLHGLEPS----------------------------------- 412
           FCK G++   + L D +   G+ P+                                   
Sbjct: 429 FCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGD 488

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
           AVTYT  +NA+C   N ++ + L  EM      P  + Y  +I G  +  ++ +A  +L 
Sbjct: 489 AVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLA 548

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           ++  +G+ PD + YNT+I  FC+     + F++L +M    L+P + TYN LI     NG
Sbjct: 549 ELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNG 608

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG--------F 584
           DLK A  ++  + +  +  T   Y  +I A+C  G+ ++AM  F  M            +
Sbjct: 609 DLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIY 668

Query: 585 EISI-----RDYTKSFFCMMLSN---GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
            I I      +  KS   +M      G  P+      +        DL  VFE    MI+
Sbjct: 669 NILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIE 728

Query: 637 SGLLPD 642
               PD
Sbjct: 729 HACNPD 734



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/461 (23%), Positives = 186/461 (40%), Gaps = 78/461 (16%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEM----EAVGLKPDLVTYSILIRGLCKQDKVHK- 291
           N    +V LS + +SGR+ +AL ++ EM    +    +P+  T  IL   L K+++  + 
Sbjct: 189 NTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEEL 248

Query: 292 -----AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
                 + L  +     +  +SF  G ++  LC           F  +I    + +    
Sbjct: 249 LSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAAC 308

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N ++ G  + GN     +L  +++E  I P++VTF  LI   CK  +V DA  +L+  K+
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLE--KM 366

Query: 407 HG----------LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET-KAIGPTHVTYTVVI 455
            G          +EP  V Y T ++  C+ G  Q  L L++ M + K   P  +TY  +I
Sbjct: 367 SGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLI 426

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTP---------------------------------- 481
            G CK  ++++  +L ++M   GV P                                  
Sbjct: 427 DGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMK 486

Query: 482 -DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            D +TY  +I +FC   +  KA +L N+M      P +  Y  LI G    G + +A  +
Sbjct: 487 GDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFV 546

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
           L  L++  I    V Y T+I   C     H+      +M E G +               
Sbjct: 547 LAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLK--------------- 591

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                PD      ++    + GDL    ++   MIK+G++P
Sbjct: 592 -----PDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVP 627



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 132/304 (43%), Gaps = 39/304 (12%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           RTG V  AV    + +   +K    TY +L+    N+ + +   +L++++  S    +  
Sbjct: 466 RTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAI 525

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
               +I G  Q  R+ DA   L E                                   +
Sbjct: 526 VYYTLISGFSQAGRMADASFVLAE-----------------------------------L 550

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K G+ PD   YN LI G C         E   +M   G++PD ITY+ L         +
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDL 610

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQGFKLNVIAYSV 243
             A KV++K++  G  P + TY  +I  YC  GN  E +++ +++  +     N + Y++
Sbjct: 611 KFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNI 670

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++S+CK+ ++  A+ L+ +M+  G+ P+  TY+ + +GL  +  + K  +  + M    
Sbjct: 671 LINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHA 730

Query: 304 ISPN 307
            +P+
Sbjct: 731 CNPD 734



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 103/221 (46%), Gaps = 6/221 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           +S+ G + DA FV+A++K+L ++     YN+L+     T+    +++ +K  E    +  
Sbjct: 534 FSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEA-GLKP 592

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFG----PSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++I  + L   +     + F Q+   K       P+V +  A+++ YC  G    A  +F
Sbjct: 593 DTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIF 652

Query: 122 CLMLKYG-LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             M     + P+   YNILI+ LC    ++ A+    DM   GV P+  TY+ + KG   
Sbjct: 653 KDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRD 712

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
              +   ++ + +++    +PD +T  +L      +G +E 
Sbjct: 713 EKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIER 753


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 246/489 (50%), Gaps = 6/489 (1%)

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +K G  P+  + + L+ G+C  G + +ALE  + M R G + D + Y  L        Q 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++ +++L +    +  TY ++I   C+ G   +GLK+   M++ G   NVI YS L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++ +C+ G++ EA+ L  EM + G+K +++TY+ LI   C+     +A + +++M  + I
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+      ++  L +K  + EA   F+ +I      ++V YN +++G      +  AV+
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+  ++E+ I   ++++N+LI G+C +GK  +A  L   ++   L PS  TYT  + A  
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALY 300

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G I+    L   M+     P+  TYTV++ GLCK   ++EA+ +   +  I   P   
Sbjct: 301 QNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIR 360

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y+ +I    + +    A ++ +++    L P   TYNI+I+GLC  G L  A+ L V +
Sbjct: 361 IYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQM 420

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
           +E      ++++  II+    E  V KAM F  +M EK F             +ML N +
Sbjct: 421 EESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFS------PNDSVTLMLVNLY 474

Query: 605 PPDQEICEV 613
             D +  E+
Sbjct: 475 AADAQSSEL 483



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 223/441 (50%), Gaps = 3/441 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRNVYTN 66
           G V DA+ +  KM     +  I  Y  L+  LR T       +L+  +       N +T 
Sbjct: 23  GKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTY 82

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
            +VID LC+       +   +E       P+V+  +++++  C++G    A  LF  M+ 
Sbjct: 83  GLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVS 142

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G+  +  +YN LIH  C  G  +EA    + M   G+ PD +T++ L        ++  
Sbjct: 143 QGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQE 202

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A+K+ + ++ +G  P+IVTY  L+ G C    ++  ++L EVM+ +G K++VI+Y+ L++
Sbjct: 203 AYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLIN 262

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             C SG+ +EA+ L  +M+   L P + TY+IL++ L +  ++  A +L+N M     SP
Sbjct: 263 GYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSP 322

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +  +L GLC+   I EA   F SL        + +Y+I+I G  +      A++++
Sbjct: 323 SLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIF 382

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++    + P+IVT+N +I G CK GK+ +A RL   ++  G E   +++   +  + +E
Sbjct: 383 DEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQE 442

Query: 427 GNIQRLLALLQEMETKAIGPT 447
             +Q+ +  L+ M  K   P 
Sbjct: 443 NQVQKAMEFLKRMREKNFSPN 463



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 184/371 (49%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   S +I+GLC+  +L++A+    E   +    +V++ N+++   C+ G  + A   F
Sbjct: 113 NVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTF 172

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G+ PD  ++  LI  L   G ++EA +    M + G  P+ +TY+ L  G  L 
Sbjct: 173 SQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLH 232

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            Q+  A ++ + ++ +G   D+++Y  LI GYC  G  EE + L   M  +    ++  Y
Sbjct: 233 HQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTY 292

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++LL ++ ++GRI  A  L   M+  G  P L TY++L+ GLCK   + +AI ++  + S
Sbjct: 293 TILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKS 352

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
            +  P+   +  ++ G+ +      A   FD +     + ++V YNIMI+G  K G + E
Sbjct: 353 IKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLE 412

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +L+ Q+ E       ++FN +I GF +  +V  A   L  ++     P+       +N
Sbjct: 413 AERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVN 472

Query: 422 AYCEEGNIQRL 432
            Y  +     L
Sbjct: 473 LYAADAQSSEL 483



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 132/304 (43%), Gaps = 38/304 (12%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNV 63
           S+ G V +A  +   M +     +I TYNSLL  L      D    L++ +       +V
Sbjct: 195 SKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDV 254

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            + + +I+G C   + ++A+   ++   +E  PS+ +   ++    + G    AK LF  
Sbjct: 255 ISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNN 314

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G  P   +Y +L+ GLC  G +EEA++    +     +P    YSIL  G     +
Sbjct: 315 MQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARR 374

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A ++  ++   G  P+IVTY ++I G C                             
Sbjct: 375 WESAMEIFDEIPTVGLVPNIVTYNIMINGLC----------------------------- 405

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
                 K G++ EA  L  +ME  G + D ++++ +IRG  ++++V KA++    M  K 
Sbjct: 406 ------KEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKN 459

Query: 304 ISPN 307
            SPN
Sbjct: 460 FSPN 463



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 101/200 (50%), Gaps = 3/200 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           Y  +G   +A+ +  KM+  +L  SI TY  L   LY         +L++++++     +
Sbjct: 264 YCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPS 323

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T ++++DGLC+   +++AI   +     ++ PS+   + ++    +    E A  +F 
Sbjct: 324 LDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFD 383

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   GL P+  +YNI+I+GLC  G + EA      M   G E D I+++ + +GF   +
Sbjct: 384 EIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQEN 443

Query: 183 QISGAWKVIQKLLIKGSDPD 202
           Q+  A + ++++  K   P+
Sbjct: 444 QVQKAMEFLKRMREKNFSPN 463



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 93/235 (39%), Gaps = 20/235 (8%)

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G +P+ VT +T +   C EG +   L L  +M         + Y  +I  L K  + + A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           V+L   M     + +  TY  +I S CK     K  ++  +M    + P    Y+ LI+G
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC  G L+ A  L   +    I    + Y ++I A C  G   +A   F QMV       
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMV------- 176

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                          G  PD      ++    + G +   +++  +MIK G  P+
Sbjct: 177 -------------GEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPN 218


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 257/516 (49%), Gaps = 13/516 (2%)

Query: 33  TYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TY SL++ L      D  ++L D+++    P  V  ++ VI GLC+  R  DA+ + +  
Sbjct: 32  TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTV 91

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF-CLMLKYGLHPDAFSYNILIHGLCIAGS 148
           AG +  P +++ N ++    K G  E A  +F  +       P+  +Y  +I+GLC  G 
Sbjct: 92  AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGK 151

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           ++ A+E  + M   G  P+ ITYS+L +G     +    + ++Q++  +G  PD++ Y  
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           L+ G C+   ++E L+L ++M+  G    V+ Y+ L+   C+S ++D A  L+  M   G
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
             PD++ Y+ +I GLC+  ++  A  L  +M + R  P+   +  I+ GLC K+   +A 
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC-KDWRVDAD 330

Query: 329 MYFDS-------LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
              ++       +  + C  +   Y ++I+G  +     +A+ L R++I+  + P + +F
Sbjct: 331 WKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSF 390

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           + +I   CK+  +  A ++   +     +P+ V Y   ++   + G + + + +  E+  
Sbjct: 391 SMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMV 449

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           ++  P   TY  V+ GLC   +++EAV+++E M      PD  +Y  +IR  C+   + +
Sbjct: 450 ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEE 509

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           A++L   +           YN+L++ LC    L +A
Sbjct: 510 AYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 246/504 (48%), Gaps = 8/504 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+  +  +++   CK G  + A  L   M   G+ P    +N +I GLC AG   +AL +
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD-PDIVTYTVLICGYC 214
              +      PD IT++IL        ++  A+++ + +       P++VTYT +I G C
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           + G ++  ++L ++M   G   NVI YSVL+  +CK+GR D+   LL EM   G +PD++
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
            Y+ L+ GLCK  ++ +A++L   M      P    + +++   C  + +  A      +
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
               C  DV+ YN +I G  +   + +A  L +Q++  R  P ++T++++I G CK+ +V
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327

Query: 395 -AD-----ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            AD     A  +L+ +K  G  P+A TY   +   C     Q+ LALL+ M    + P  
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
            ++++VI  LCK   L  A ++   M      P+ + Y  +I    K  ++ KA ++  +
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-E 446

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           + + +  P  ATYN ++DGLC  G ++ A  ++  +          +Y  +I+  C    
Sbjct: 447 LMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSC 506

Query: 569 VHKAMTFFCQMVEKGFEISIRDYT 592
           V +A   F  +  KGF + +  Y 
Sbjct: 507 VEEAYELFQAVEAKGFAMEVGVYN 530



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 196/406 (48%), Gaps = 10/406 (2%)

Query: 30  SIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           ++ TY +++  L      D   +L D +  +    NV T S++++GLC+  R       L
Sbjct: 135 NVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLL 194

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           QE   + F P V+  N +++  CK    + A  L  LM++ G +P   +YN L+   C +
Sbjct: 195 QEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRS 254

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
             ++ A      M   G  PD I Y+ +  G    +++  A  ++++++     PD++TY
Sbjct: 255 KQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITY 314

Query: 207 TVLICGYCQIGNVEEGLKLR------EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           + +I G C+   V+   KL       E+M   G   N   Y+V++  +C++ +  +AL L
Sbjct: 315 STIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALAL 374

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L  M    + PDL ++S++I  LCK   +  A +++  M  +   PN  A+ A++ GL +
Sbjct: 375 LRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSK 434

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              + +A   F+ L++ +    V  YN ++DG   +G I EAV++   +I K   P   +
Sbjct: 435 GGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGAS 493

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           + +LI G C+   V +A  L   ++  G       Y   +N  C++
Sbjct: 494 YGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKK 539



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 174/375 (46%), Gaps = 27/375 (7%)

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A+QL+ E   +R  PN F +G+++ GLC+   + +A    D +        V ++N +I
Sbjct: 16  QAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVI 72

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-L 409
            G  K G  G+A+  ++ +   + +P I+TFN L+    K+G+V +A ++ +++      
Sbjct: 73  KGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQC 132

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P+ VTYTT +N  C++G + R + LL  M      P  +TY+V+++GLCK  +  +   
Sbjct: 133 LPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFT 192

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           LL++M   G  PD I YNT++   CK + L +A +L+  M      PT  TYN L++  C
Sbjct: 193 LLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFC 252

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE-------- 581
            +  +  A  L+  + E       + Y T+I   C +  +  A     QMV         
Sbjct: 253 RSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVI 312

Query: 582 ----------KGFEISIRDYTKSFFC----MMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
                     K + +   D+     C    MM   G PP+     V++    +       
Sbjct: 313 TYSTIIDGLCKDWRVDA-DWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQA 371

Query: 628 FELAAVMIKSGLLPD 642
             L   MI S ++PD
Sbjct: 372 LALLRRMIDSEVVPD 386



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 184/408 (45%), Gaps = 45/408 (11%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G +  A+ ++  M E     ++ TY+ L+  L     TD  + L  ++       +V 
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             + +++GLC+  RL +A+  +Q        P+VV+ N++M  +C+    + A  L  +M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G  PD  +YN +I GLC    +++A      M      PD ITYS +  G     ++
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327

Query: 185 SGAWK------VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM--------- 229
              WK      +++ +   G  P+  TY V+I G C+    ++ L L   M         
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387

Query: 230 ---------------LSQGFKL-----------NVIAYSVLLSSMCKSGRIDEALGLLYE 263
                          L   +K+           N +AY+ L+  + K G +D+A+  ++E
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAV-RVFE 446

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           +     +P + TY+ ++ GLC   ++ +A+++   M  K   P+  ++GA++ GLC    
Sbjct: 447 LMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSC 506

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
           + EA   F ++       +V +YN++++   K   + +A  +  +LIE
Sbjct: 507 VEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 39/282 (13%)

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N  ++  V+ G  G+AVQL+R   E+R  P+  T+ SLI+G CK GK+  A  LLD ++ 
Sbjct: 2   NCALNLLVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 407 HGLEPSA-----------------------------------VTYTTFMNAYCEEGNIQR 431
            G+ P                                     +T+   ++A  + G ++ 
Sbjct: 59  RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 432 LLALLQEMETKA-IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
              + + M T +   P  VTYT VI GLCK  KL  A++LL+ M   G  P+ ITY+ ++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CK     K F LL +M     +P    YN L++GLC +  L  A  L+  +      
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            T V Y ++++  C    V +A      M E+G    + +Y 
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYN 280



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 131/272 (48%), Gaps = 10/272 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDL------YDDIKVSE 58
           R   + DA  ++ +M        + TY++++  L      D  W L       + +K + 
Sbjct: 288 RDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG 347

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
            P N  T ++VI+GLC+  + Q A+  L+     E  P + S + ++   CK    + A 
Sbjct: 348 CPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAY 407

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F +M +    P+  +Y  LI GL   G +++A+     M      P   TY+ +  G 
Sbjct: 408 KIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM-VESFRPGVATYNSVLDGL 466

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             + +I  A ++++ ++ K   PD  +Y  LI G C++  VEE  +L + + ++GF + V
Sbjct: 467 CGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEV 526

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
             Y+VL++ +CK  R+ +A G+  ++   G K
Sbjct: 527 GVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 158/524 (30%), Positives = 249/524 (47%), Gaps = 11/524 (2%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQE--TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +T + V+D L +  R+++A+    E    GK+   SVV    +M  YC       A  +F
Sbjct: 248 FTFNSVVDVLVKGGRMEEALHIKDELLATGKKM--SVVLATTLMHGYCLQREVRKALDIF 305

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              L+ GL P   +Y +LI G    G  E+A E    M  HG+ P    ++++ KG  LL
Sbjct: 306 EETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKG--LL 363

Query: 182 SQISGAWKVIQKLLIKGSD---PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
           +     WK    L  + +D   PD  TY +LI   CQ   + E L L E M   G K  +
Sbjct: 364 ND--KLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYI 421

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y  LL   C +G +DEA+ L  EM   G  P++VTY+ L++G   +    KA  L  E
Sbjct: 422 VTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAE 481

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M    +S N + +  ++ GLC    + E             +   + YN +I+G++K G 
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGM 541

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +G A  +Y+Q+  K I P+IVT+ S I G+CK      A ++L+ ++  GL P    Y +
Sbjct: 542 MGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNS 601

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +  +C+EGN+   L +L  M    + P    Y   I G      ++EA++L E M   G
Sbjct: 602 LIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEG 661

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           +  D  TY T+I  F K  ++  A +L ++M      P   T+  L  GLC NGD+ +A 
Sbjct: 662 IDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDAR 721

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            LL  +   +I    + Y  +I  +   G + +A     +M+E+
Sbjct: 722 KLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLER 765



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 256/525 (48%), Gaps = 6/525 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDD-IKVSETP 60
           V  + G + +A+ +  ++     K+S+    +L++     R      D++++ ++    P
Sbjct: 256 VLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVP 315

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            +V T +++I G  ++   + A    ++       PS    N ++         + A  L
Sbjct: 316 TDV-TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL 374

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M   G+ PDAF+YNILIH LC    + EAL     M   GV+P  +TY  L   + +
Sbjct: 375 FKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCV 433

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A K+  ++  KG  P++VTYT L+ G+      ++   L   M   G   N   
Sbjct: 434 NGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYT 493

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L++ +C  GR+ E   +L   E  G  P  +TY+ +I G  K   +  A  +Y +MC
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC 553

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +K I PN   + + + G C+      A    + +       D+  YN +I G+ + GN+ 
Sbjct: 554 AKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMS 613

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A+Q+   +++  + P+I  +NS I G+     + +A RL + +   G++    TYTT +
Sbjct: 614 HALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLI 673

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + + ++GN+   L L  EM  K   P H+T+T +  GLC+   + +A +LL++M  + + 
Sbjct: 674 DGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIR 733

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           P+ + YN +I  + +   L++AF+L ++M    + P   TY+IL+
Sbjct: 734 PNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 142/524 (27%), Positives = 245/524 (46%), Gaps = 1/524 (0%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P + +   +V+    ++    DA+    E    E  P     +  ++  CKL  A  A  
Sbjct: 174 PLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALL 233

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   M   G  P  F++N ++  L   G MEEAL   +++   G +   +  + L  G+ 
Sbjct: 234 VLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYC 293

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           L  ++  A  + ++ L  G  P  VTYTVLI G  + G  E+  +L   M   G   +  
Sbjct: 294 LQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            +++++  +       +A+ L  EM   G+ PD  TY+ILI  LC++ K+ +A+ L+ +M
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKM 412

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               + P    + ++LL  C    + EA   +  +       +VV Y  ++ G++     
Sbjct: 413 NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A  L  ++ +  +S +  T+N+LI G C  G+V +   +L   +  G  P+A+TY + 
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSI 532

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N + + G +    A+ Q+M  K I P  VTYT  I G CK      A+++L D+   G+
Sbjct: 533 INGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGL 592

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD   YN++I  FC+  ++  A Q+L  M    L P  + YN  I G      ++ A  
Sbjct: 593 RPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALR 652

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L   + +  I L    YTT+I     +G+V  A+  + +MV KG
Sbjct: 653 LYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKG 696



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 240/526 (45%), Gaps = 16/526 (3%)

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           DA+ +++++      G  ++A+   ++M    +EPD    S+       L   + A  V+
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           +K+   G  P   T+  ++    + G +EE L +++ +L+ G K++V+  + L+   C  
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
             + +AL +  E    GL P  VTY++LIRG  ++    KA +L  +M    + P++   
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++ GL   ++  +A   F  +  S  I D   YNI+I    +   I EA+ L+ ++ E
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNE 414

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
             + P IVT++SL+  +C NG + +A +L   +   G  P+ VTYTT M  +  +    +
Sbjct: 415 TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK 474

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
             ALL EM+   +     TY  +I GLC   ++ E  ++L+     G  P  +TYN+II 
Sbjct: 475 AYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIIN 534

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            F K   +  AF +  QM    + P   TY   IDG C       A  +L  ++   +  
Sbjct: 535 GFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRP 594

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFF 596
              AY ++I   C EG++  A+     M++ G   +I  Y                   +
Sbjct: 595 DIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLY 654

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             M+  G   D      ++  F + G++    +L + M+  G +PD
Sbjct: 655 EKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPD 700



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 187/425 (44%), Gaps = 51/425 (12%)

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           MEA G+ PD  + + L+    +      A+ L  EM  K    +++    ++    ++ M
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
             +A   FD +  S    D  + ++ I    KL +   A+ + R++ +    P   TFNS
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           ++    K G++ +A  + D +   G + S V  TT M+ YC +  +++ L + +E     
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 444 IGPTHVTYTVVIKG------------LCKQ-------------------------WKLQE 466
           + PT VTYTV+I+G            LC+Q                         WK  +
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWK--D 370

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           AV L ++M   G+ PD  TYN +I   C+ + +R+A  L  +M    ++P   TY+ L+ 
Sbjct: 371 AVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLL 429

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
             CVNG +  A  L   +     +   V YTT++K H  +    KA     +M + G  +
Sbjct: 430 CYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNG--V 487

Query: 587 SIRDYTKSFFCMMLSNGFPPDQEICEV--MLIAFHQGGDLGSVFELAAVM---IKSGLLP 641
           S  DYT +     L NG      +CEV  ML  F   G + +     +++   IK+G++ 
Sbjct: 488 SCNDYTYN----TLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543

Query: 642 DKFLI 646
             F +
Sbjct: 544 SAFAV 548


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 157/589 (26%), Positives = 288/589 (48%), Gaps = 18/589 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVS---IQTYNSLLYNLRHTDIMWDLYDDIKVSETPRN 62
           +  + M ++++ ++++M+E+ ++ S   I     LL  +     +W L   + + + PR 
Sbjct: 218 FMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGM-IRDGPRP 276

Query: 63  VYTN-SIVIDGLCQQS--RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
              N +I+I   CQ+   R+ +++LF+      E  P V + N +++ Y   G    A G
Sbjct: 277 CNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCE--PDVYAYNILINAYRIRGRTSDALG 334

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
              LM+K G  P   +++ +I   C  G++ EA +    +   G+ P+   Y+ L  G+ 
Sbjct: 335 FLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYF 394

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQGFKLNV 238
               +  A  + +++  KG  PD  T+ +L+ G  + G   +  +L R+  LS     + 
Sbjct: 395 KARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSS-LVPDC 453

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK---QDKVHKAIQL 295
             Y V ++ +C +G++DEA+  L +M   G+ P +V ++ +I    +   +D  HKA   
Sbjct: 454 SLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKA--- 510

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           Y  M    + P+S    ++LLGL +K  + EAR     +I      + V + +++DGY K
Sbjct: 511 YKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFK 570

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +G+   A  L+ ++  + I P  + F++ I G  K G V +A      +   G  P+   
Sbjct: 571 VGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFV 630

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y + ++  C  G +   L L +EM  K + P   T  ++I G CK+ +++ A     +M+
Sbjct: 631 YNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMH 690

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            IGVTPD +TYNT+I  +CK  D+  A + LN+M+    +P   TYNI I G C +  + 
Sbjct: 691 HIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKIS 750

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            A  +L  L    +    V Y T++ A C +  + +AM    ++++  F
Sbjct: 751 RAVTMLDELIAVGVVPNTVTYNTMMNAVCTDM-LDRAMVLTAKLLKMAF 798



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 221/469 (47%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M++ G  P   ++NI+I   C  G +  A      M +   EPD   Y+IL   + +  +
Sbjct: 269 MIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGR 328

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
            S A   +  ++  G  P ++T++ +I  +C  GNV E  K+ E +   G   NV  Y+ 
Sbjct: 329 TSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNT 388

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+S   K+  + +A  L  EM   G+ PD  T++IL+ G  K  K   + +L+ +     
Sbjct: 389 LMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSS 448

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P+   +   + GLC    + EA  + + ++       VV +N +I  Y + G    A 
Sbjct: 449 LVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAH 508

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           + Y+ ++   + PS  T +S++ G  K G++ +AR LL  +   GL  + V +T  ++ Y
Sbjct: 509 KAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGY 568

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            + G+     +L  EME + I P  + ++  I GL K   ++EA +   +M   G  P+ 
Sbjct: 569 FKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNN 628

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
             YN++I   C C  L +A +L  +M    L P   T NI+I+G C  G +K+A      
Sbjct: 629 FVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAE 688

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +    ++   V Y T+I  +C   D+  A  F  +M   G++  I  Y 
Sbjct: 689 MHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYN 737



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 236/511 (46%), Gaps = 7/511 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPR 61
            Y   G   DA+  +  M +   K S+ T+++++    N  +      +++ I+      
Sbjct: 322 AYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSP 381

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   + ++ G  +   +  A +  +E   K   P   + N +++   K G    +  LF
Sbjct: 382 NVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELF 441

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
                  L PD   Y++ + GLC AG ++EA++F  DM   G+ P  + ++ +   +   
Sbjct: 442 RDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRA 501

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
                A K  + +L+ G  P   T + ++ G  + G ++E   L   M+ +G  +N +A+
Sbjct: 502 GFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAF 561

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VLL    K G    A  L YEMEA G+ PD + +S  I GL K   V +A + ++EM  
Sbjct: 562 TVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSK 621

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   PN+F + +++ GLC    + EA      +     + D+   NI+I+G+ K G +  
Sbjct: 622 KGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKS 681

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A   + ++    ++P  VT+N+LI G+CK   +  A   L+ +   G +P   TY   + 
Sbjct: 682 AFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQ 741

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C    I R + +L E+    + P  VTY  ++  +C    L  A+ L   +  +   P
Sbjct: 742 GFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVP 800

Query: 482 DQITYNTIIRSFCKCKDLRKAF---QLLNQM 509
           + +T N ++  FCK     KA    Q LN++
Sbjct: 801 NVVTTNVLLSHFCKQGMPEKALIWGQKLNKL 831



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 188/442 (42%), Gaps = 50/442 (11%)

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           E+L +L  M  VG++P     SIL R L +        +L   M      P +     ++
Sbjct: 226 ESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMI 285

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
           L  C+K  +  A      +    C  DV  YNI+I+ Y   G   +A+     +I+    
Sbjct: 286 LCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCK 345

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           PS++TF+++I  FC  G V +AR++ + I+  GL P+   Y T M+ Y +  ++ +   L
Sbjct: 346 PSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANML 405

Query: 436 LQEMETKAIGPTHVT-----------------------------------YTVVIKGLCK 460
            +EM  K I P   T                                   Y V + GLC 
Sbjct: 406 YEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCW 465

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             +L EA+Q LEDM   G+ P  + +N++I ++ +      A +    M +  L P+S+T
Sbjct: 466 AGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSST 525

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
            + ++ GL   G L+ A  LL  + +  + + KVA+T ++  +   GD   A + + +M 
Sbjct: 526 CSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEME 585

Query: 581 EKG-------FEISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
            +G       F   I   +K+         F  M   GF P+  +   ++      G L 
Sbjct: 586 ARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLH 645

Query: 626 SVFELAAVMIKSGLLPDKFLIN 647
              +L   M + GLLPD F  N
Sbjct: 646 EALKLEREMRQKGLLPDIFTTN 667



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 97/251 (38%), Gaps = 15/251 (5%)

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
           H  E       T M  +         L +L  M    + P+    +++ + L +      
Sbjct: 202 HKYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGS 261

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
             +LL  M   G  P    +N +I  FC+   LR A  LL  M     EP    YNILI+
Sbjct: 262 VWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILIN 321

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
              + G   +A   L  + ++    + + ++TII A C EG+V +A   F  + E G   
Sbjct: 322 AYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSP 381

Query: 587 SI-------------RDYTKS--FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           ++             RD  ++   +  M   G  PD     +++   ++ G     +EL 
Sbjct: 382 NVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELF 441

Query: 632 AVMIKSGLLPD 642
                S L+PD
Sbjct: 442 RDWSLSSLVPD 452


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 257/516 (49%), Gaps = 13/516 (2%)

Query: 33  TYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TY SL++ L      D  ++L D+++    P  V  ++ VI GLC+  R  DA+ + +  
Sbjct: 32  TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTV 91

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF-CLMLKYGLHPDAFSYNILIHGLCIAGS 148
           AG +  P +++ N ++    K G  E A  +F  +       P+  +Y  +I+GLC  G 
Sbjct: 92  AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGK 151

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           ++ A+E  + M   G  P+ ITYS+L +G     +    + ++Q++  +G  PD++ Y  
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           L+ G C+   ++E L+L ++M+  G    V+ Y+ L+   C+S ++D A  L+  M   G
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
             PD++ Y+ +I GLC+  ++  A  L  +M + R  P+   +  I+ GLC K+   +A 
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC-KDWRVDAD 330

Query: 329 MYFDS-------LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
              ++       +  + C  +   Y ++I+G  +     +A+ L R++I+  + P + +F
Sbjct: 331 WKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSF 390

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           + +I   CK+  +  A ++   +     +P+ V Y   ++   + G + + + +  E+  
Sbjct: 391 SMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMV 449

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           ++  P   TY  V+ GLC   +++EAV+++E M      PD  +Y  +IR  C+   + +
Sbjct: 450 ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEE 509

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           A++L   +           YN+L++ LC    L +A
Sbjct: 510 AYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 246/504 (48%), Gaps = 8/504 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+  +  +++   CK G  + A  L   M   G+ P    +N +I GLC AG   +AL +
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD-PDIVTYTVLICGYC 214
              +      PD IT++IL        ++  A+++ + +       P++VTYT +I G C
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           + G ++  ++L ++M   G   NVI YSVL+  +CK+GR D+   LL EM   G +PD++
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
            Y+ L+ GLCK  ++ +A++L   M      P    + +++   C  + +  A      +
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
               C  DV+ YN +I G  +   + +A  L +Q++  R  P ++T++++I G CK+ +V
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327

Query: 395 -AD-----ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            AD     A  +L+ +K  G  P+A TY   +   C     Q+ LALL+ M    + P  
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
            ++++VI  LCK   L  A ++   M      P+ + Y  +I    K  ++ KA ++  +
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-E 446

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           + + +  P  ATYN ++DGLC  G ++ A  ++  +          +Y  +I+  C    
Sbjct: 447 LMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSC 506

Query: 569 VHKAMTFFCQMVEKGFEISIRDYT 592
           V +A   F  +  KGF + +  Y 
Sbjct: 507 VEEAYELFQAVEAKGFAMEVGVYN 530



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 196/406 (48%), Gaps = 10/406 (2%)

Query: 30  SIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           ++ TY +++  L      D   +L D +  +    NV T S++++GLC+  R       L
Sbjct: 135 NVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLL 194

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           QE   + F P V+  N +++  CK    + A  L  LM++ G +P   +YN L+   C +
Sbjct: 195 QEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRS 254

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
             ++ A      M   G  PD I Y+ +  G    +++  A  ++++++     PD++TY
Sbjct: 255 KQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITY 314

Query: 207 TVLICGYCQIGNVEEGLKLR------EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           + +I G C+   V+   KL       E+M   G   N   Y+V++  +C++ +  +AL L
Sbjct: 315 STIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALAL 374

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L  M    + PDL ++S++I  LCK   +  A +++  M  +   PN  A+ A++ GL +
Sbjct: 375 LRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSK 434

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              + +A   F+ L++ +    V  YN ++DG   +G I EAV++   +I K   P   +
Sbjct: 435 GGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGAS 493

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           + +LI G C+   V +A  L   ++  G       Y   +N  C++
Sbjct: 494 YGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKK 539



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 174/375 (46%), Gaps = 27/375 (7%)

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A+QL+ E   +R  PN F +G+++ GLC+   + +A    D +        V ++N +I
Sbjct: 16  QAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVI 72

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-L 409
            G  K G  G+A+  ++ +   + +P I+TFN L+    K+G+V +A ++ +++      
Sbjct: 73  RGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQC 132

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P+ VTYTT +N  C++G + R + LL  M      P  +TY+V+++GLCK  +  +   
Sbjct: 133 LPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFT 192

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           LL++M   G  PD I YNT++   CK + L +A +L+  M      PT  TYN L++  C
Sbjct: 193 LLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFC 252

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE-------- 581
            +  +  A  L+  + E       + Y T+I   C +  +  A     QMV         
Sbjct: 253 RSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVI 312

Query: 582 ----------KGFEISIRDYTKSFFC----MMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
                     K + +   D+     C    MM   G PP+     V++    +       
Sbjct: 313 TYSTIIDGLCKDWRVDA-DWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQA 371

Query: 628 FELAAVMIKSGLLPD 642
             L   MI S ++PD
Sbjct: 372 LALLRRMIDSEVVPD 386



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 184/408 (45%), Gaps = 45/408 (11%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G +  A+ ++  M E     ++ TY+ L+  L     TD  + L  ++       +V 
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             + +++GLC+  RL +A+  +Q        P+VV+ N++M  +C+    + A  L  +M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G  PD  +YN +I GLC    +++A      M      PD ITYS +  G     ++
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327

Query: 185 SGAWK------VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM--------- 229
              WK      +++ +   G  P+  TY V+I G C+    ++ L L   M         
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387

Query: 230 ---------------LSQGFKL-----------NVIAYSVLLSSMCKSGRIDEALGLLYE 263
                          L   +K+           N +AY+ L+  + K G +D+A+  ++E
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAV-RVFE 446

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           +     +P + TY+ ++ GLC   ++ +A+++   M  K   P+  ++GA++ GLC    
Sbjct: 447 LMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSC 506

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
           + EA   F ++       +V +YN++++   K   + +A  +  +LIE
Sbjct: 507 VEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 39/282 (13%)

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N  ++  V+ G  G+AVQL+R   E+R  P+  T+ SLI+G CK GK+  A  LLD ++ 
Sbjct: 2   NCALNLLVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 407 HGLEPSA-----------------------------------VTYTTFMNAYCEEGNIQR 431
            G+ P                                     +T+   ++A  + G ++ 
Sbjct: 59  RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 432 LLALLQEMETKA-IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
              + + M T +   P  VTYT VI GLCK  KL  A++LL+ M   G  P+ ITY+ ++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CK     K F LL +M     +P    YN L++GLC +  L  A  L+  +      
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            T V Y ++++  C    V +A      M E+G    + +Y 
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYN 280



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 131/272 (48%), Gaps = 10/272 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDL------YDDIKVSE 58
           R   + DA  ++ +M        + TY++++  L      D  W L       + +K + 
Sbjct: 288 RDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG 347

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
            P N  T ++VI+GLC+  + Q A+  L+     E  P + S + ++   CK    + A 
Sbjct: 348 CPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAY 407

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F +M +    P+  +Y  LI GL   G +++A+     M      P   TY+ +  G 
Sbjct: 408 KIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM-VESFRPGVATYNSVLDGL 466

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             + +I  A ++++ ++ K   PD  +Y  LI G C++  VEE  +L + + ++GF + V
Sbjct: 467 CGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEV 526

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
             Y+VL++ +CK  R+ +A G+  ++   G K
Sbjct: 527 GVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 159/587 (27%), Positives = 275/587 (46%), Gaps = 43/587 (7%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPR 61
           V++   M+ DA  V  + +   L+++I + N LL        T+ +  L++++K S    
Sbjct: 187 VFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSP 246

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA---EVAK 118
           NV+T +I                                   +M+ YCK  F    ++ K
Sbjct: 247 NVFTYTI-----------------------------------MMNYYCKGSFGKNIDIVK 271

Query: 119 GLFCL--MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
               L  M   G  P   +Y   IHGLC AG +E AL    D+       ++  Y+ +  
Sbjct: 272 ATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIH 331

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F    ++  A+++++ +   G  P   +Y++LI G C+ G VE+ L L E M+    K 
Sbjct: 332 EFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKP 391

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +++ YS L   +CKSG  + +L + + + A G K D+++Y+ LI G   Q  +  A +L 
Sbjct: 392 SLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLV 451

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           +EM      PNSF    ++ G C+++ + +A   F  ++      ++   NIM D + + 
Sbjct: 452 HEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNRE 511

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G+  EA++L  ++ +  I P+  T+N +I   CK  K   A  +L  +  + + P A+ Y
Sbjct: 512 GHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHY 571

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T ++ Y ++ N  + L L  +M    I P+ VTYT++I     + K+QEA  L ++M  
Sbjct: 572 NTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIK 631

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+ PD+I +  II  FCK  D++ A+ L  +M      P   TY  LIDG      +  
Sbjct: 632 KGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDK 691

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           AD L   ++  N++   + YT +I  + + G   +    F +M E G
Sbjct: 692 ADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENG 738



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 152/568 (26%), Positives = 262/568 (46%), Gaps = 20/568 (3%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
           G S++  N ++  + +      A  +F    ++GL  +  S N L++    A   E    
Sbjct: 175 GGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRS 234

Query: 155 FTNDMGRHGVEPDAITYSIL----AKG-FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
              ++   G  P+  TY+I+     KG F     I  A +V++++ + G  P +VTY   
Sbjct: 235 LFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAY 294

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G C+ G VE  L+L   +  +   LN   Y+ ++   C++G + EA  LL +M + G+
Sbjct: 295 IHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGI 354

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P   +YSILI GLCK+ +V KA+ L  EM    + P+   + ++  GLC+  +   +  
Sbjct: 355 SPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLS 414

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
            F +L       DV+ YN +I+G+V   ++G A +L  ++      P+  TFN LI+GFC
Sbjct: 415 MFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFC 474

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K  ++  A  +   +   G++ +  T     + +  EG+    L L+ E++   I P   
Sbjct: 475 KRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSY 534

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY +VIK LCK+ K ++A ++L  M    V P  I YNT+I  + K  +  KA  L  +M
Sbjct: 535 TYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKM 594

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               + P+  TY +LI+       ++ A  L   + +  +   ++ +T II   C  GD+
Sbjct: 595 LKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDM 654

Query: 570 HKAMTFFCQMVEKG---------------FEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
             A   + +M + G               F+I   D     F  M  +   PD      +
Sbjct: 655 KSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTAL 714

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +  +   G    V E+   M ++G+ P+
Sbjct: 715 IFGYQSLGYSDRVREMFNEMKENGVFPN 742



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 225/475 (47%), Gaps = 35/475 (7%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L  D+++   P N Y  + VI   C+   L +A   L++       P+  S + ++   C
Sbjct: 310 LIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLC 369

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           K G  E A  L   M++  + P   +Y+ L  GLC +G  E +L   +++G  G + D I
Sbjct: 370 KKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVI 429

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+ L  GF L   +  A K++ ++ + GS P+  T+  LI G+C+   +++ L++  +M
Sbjct: 430 SYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIM 489

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           L  G +LN+   +++     + G   EAL L+ E++ +G+ P+  TY+I+I+ LCK+ K 
Sbjct: 490 LKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKT 549

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            KA ++   M    + P            C                        + YN +
Sbjct: 550 EKAWEVLPVMLKNNVFP------------C-----------------------AIHYNTL 574

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           IDGY K  N  +A+ LY ++++  I PSIVT+  LI  F    K+ +A  L   +   GL
Sbjct: 575 IDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGL 634

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P  + +T  +  +C+ G+++   AL +EM      P  VTYT +I G  K  ++ +A  
Sbjct: 635 VPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADF 694

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           L   M    VTPD +TY  +I  +       +  ++ N+M  + + P    Y  L
Sbjct: 695 LFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/547 (24%), Positives = 243/547 (44%), Gaps = 47/547 (8%)

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE----------------PDA-- 168
           +G     +++ I+IH L  AG   E   F  D+  +  E                 DA  
Sbjct: 115 HGFSHSIYAFKIIIHVLASAGLQMEVQIFLRDIISYYKEVNLDVSELFSTLLDSPQDAHM 174

Query: 169 ----ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
               I  ++L K F   + +  A  V  +    G + +I++   L+  + +    E    
Sbjct: 175 GGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRS 234

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSG---RID--EALGLLYEMEAVGLKPDLVTYSIL 279
           L E +   G   NV  Y+++++  CK      ID  +A  +L EME  G  P +VTY   
Sbjct: 235 LFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAY 294

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I GLC+   V  A++L  ++  +    NS+ + A++   C    + EA    + +     
Sbjct: 295 IHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGI 354

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
                 Y+I+IDG  K G + +A+ L  ++++  + PS+VT++SL  G CK+G    +  
Sbjct: 355 SPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLS 414

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           +   +   G +   ++Y T +N +  + ++     L+ EM      P   T+  +I G C
Sbjct: 415 MFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFC 474

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K+ +L +A+++   M  +GV  +  T N +   F +     +A +L+N++    + P S 
Sbjct: 475 KRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSY 534

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYNI+I  LC     + A  +L  + ++N+    + Y T+I  +  + +  KA+  + +M
Sbjct: 535 TYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKM 594

Query: 580 VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
           ++ G   SI  YT      ML N F    ++ E               + L   MIK GL
Sbjct: 595 LKVGIPPSIVTYT------MLINMFSNRSKMQEA--------------YYLFKEMIKKGL 634

Query: 640 LPDKFLI 646
           +PD+ + 
Sbjct: 635 VPDEIIF 641



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 134/270 (49%), Gaps = 2/270 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N++T +I+ D   ++    +A+  + E       P+  + N ++   CK    E A  + 
Sbjct: 497 NIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVL 556

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +MLK  + P A  YN LI G     +  +AL     M + G+ P  +TY++L   F   
Sbjct: 557 PVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNR 616

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           S++  A+ + ++++ KG  PD + +T +I G+C++G+++    L E M   G   NV+ Y
Sbjct: 617 SKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTY 676

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+    K  R+D+A  L  +M+   + PD +TY+ LI G        +  +++NEM  
Sbjct: 677 TCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKE 736

Query: 302 KRISPN--SFAHGAILLGLCEKEMITEARM 329
             + PN  ++A   + LG+  +E     RM
Sbjct: 737 NGVFPNYTAYATLGLHLGVVREEPAKGERM 766



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 32/204 (15%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y++      A+ + AKM ++ +  SI TY  L+                       N+++
Sbjct: 578 YAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLI-----------------------NMFS 614

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           N         +S++Q+A    +E   K   P  +    I++ +CK+G  + A  L+  M 
Sbjct: 615 N---------RSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMS 665

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           ++G  P+  +Y  LI G      M++A    N M R  V PD +TY+ L  G+  L    
Sbjct: 666 QWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSD 725

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVL 209
              ++  ++   G  P+   Y  L
Sbjct: 726 RVREMFNEMKENGVFPNYTAYATL 749


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 153/558 (27%), Positives = 269/558 (48%), Gaps = 8/558 (1%)

Query: 35  NSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEF 94
           N+LL  L    +  D+ + +      RN+ T + +I+  C    +  A   L        
Sbjct: 45  NTLLMALARHRMFPDM-ESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGL 103

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
            P   +  + +  YC+ G    A  +F LM   G    AF+Y  L+HGL  AG + EA+ 
Sbjct: 104 APDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMA 163

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
               M      PD   Y+ +  G     +   A  ++++ +  G +P+IV Y  LI GYC
Sbjct: 164 VFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYC 223

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
             G +E  LK+ E M       NV  Y+ L+  +CKSG+++ A+ L   M   GL+P++V
Sbjct: 224 NAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVV 283

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+ LI+G C +  +  A +L + M +  + PN +    ++  LC++E + EA+++  SL
Sbjct: 284 TYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSL 343

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           +      + V+Y  +IDG  K G I  A +L +++I +   P   +++SLI G C+  K+
Sbjct: 344 VKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKL 403

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
           + A  +L+ +   G++ S VTYT  ++    E   +    +  +M    I P  VTYTV 
Sbjct: 404 SQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVF 463

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           ++  C++ ++++A  ++  M   GV P+ +TYNT+IR +     + +AF     M     
Sbjct: 464 VRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGW 523

Query: 515 EPTSATYNILIDGLCVNGDLKNA-DCLLVS----LQEHNISLTKVAYTTIIKAHCAEGDV 569
           +P   +Y +L+  +       N+ D   ++    LQE N    ++ +  +I     +G V
Sbjct: 524 KPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYD--EIVWKILIYGLLQKGSV 581

Query: 570 HKAMTFFCQMVEKGFEIS 587
            +  +    M E G++ S
Sbjct: 582 AEFSSLLSVMKEHGYQPS 599



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 212/458 (46%), Gaps = 17/458 (3%)

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           ++ TYT LI  YC  G++    +    +L  G   +  AY+  +   C++G +  A  + 
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
             M   G      TY+ L+ GL     V +A+ ++  M +   +P++  +  ++ GLCE 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 322 EMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              TE         MSN  + ++V+YN +IDGY   G +  A++++  +   R SP++ T
Sbjct: 191 GR-TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRT 249

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +  LI+G CK+GKV  A  L   +   GLEP+ VTYT  +   C EG++Q    LL  ME
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
           T  + P   T++V+I  LCK+ K++EA   L  +   GV  +++ Y ++I   CK   + 
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKID 369

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
            A +L+ +M      P + +Y+ LIDGLC    L  A  +L  + E  I  + V YT II
Sbjct: 370 AADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIII 429

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFP 605
                E         F +M+  G    I  YT               +S    M+  G  
Sbjct: 430 DELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVF 489

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           P+      ++  +   G +   F    VM+  G  P++
Sbjct: 490 PNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNE 527



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 227/458 (49%)

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +Y  LI+  C+AG +  A +    +   G+ PD+  Y+    G+     ++ A +V   +
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
            ++G      TYT L+ G    G V E + +   M +     +   Y+ ++  +C++GR 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           +EA  LL E  + G +P++V Y+ LI G C   ++  A++++  M   R SPN   +  +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + GLC+   +  A + F  ++ +    +VV Y  +I G    G++  A +L   +    +
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P+  TF+ LI   CK  KV +A+  L ++   G++ + V YT+ ++  C+ G I     
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L+Q+M ++   P   +Y+ +I GLC+Q KL +A  +LEDM   G+    +TY  II    
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           +        ++ ++M    + P   TY + +   C  G +++A+ ++V + +  +    V
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            Y T+I+ +   G V +A + F  MV KG++ +   YT
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYT 531



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 197/431 (45%), Gaps = 15/431 (3%)

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           E + S+    N+  Y+ L+++ C +G I  A   L  +   GL PD   Y+  + G C+ 
Sbjct: 61  ESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRA 120

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
             +  A +++  M  +     +F + A+L GL    M+ EA   F  +   +C  D  +Y
Sbjct: 121 GMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVY 180

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
             M+ G  + G   EA  L  + +     P+IV +N+LI G+C  G++  A ++ + +  
Sbjct: 181 ATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDG 240

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
           +   P+  TYT  ++  C+ G ++R + L   M    + P  VTYT +I+G C +  LQ 
Sbjct: 241 NRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQC 300

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A +LL  M   G+ P+  T++ +I + CK + + +A   L  +    ++     Y  LID
Sbjct: 301 AFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID 360

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           GLC  G +  AD L+  +          +Y+++I   C +  + +A      M+EKG + 
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQA 420

Query: 587 SIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           S   YT               K  F  M++ G  PD     V + ++ + G +     + 
Sbjct: 421 SPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMI 480

Query: 632 AVMIKSGLLPD 642
             M+  G+ P+
Sbjct: 481 VQMVDRGVFPN 491



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 45/267 (16%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIK---VSE--TPRNVYTN 66
           V +A   +  + +  +KV+   Y SL+  L  T  + D  D++    +SE   P + ++ 
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKI-DAADELMQKMISEGFVP-DAHSY 390

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S +IDGLC+Q +L  A L L++   K    S V+   I+    +   +E  K +F  M+ 
Sbjct: 391 SSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIA 450

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G++PD  +Y + +   C  G ME+A      M   GV P+ +TY+ L +G+  L  +S 
Sbjct: 451 TGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQ 510

Query: 187 AWKVIQKLLIKGSDPDIVTYTVL------------------------------------- 209
           A+   + ++ KG  P+  +YTVL                                     
Sbjct: 511 AFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKI 570

Query: 210 -ICGYCQIGNVEEGLKLREVMLSQGFK 235
            I G  Q G+V E   L  VM   G++
Sbjct: 571 LIYGLLQKGSVAEFSSLLSVMKEHGYQ 597


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 227/415 (54%), Gaps = 3/415 (0%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
           GP V++ NA+M+ YC  G  + A+  +C   +  +  DA++ + LI GLC  G    AL 
Sbjct: 125 GPDVMAYNAMMAGYCGAGQVDAAR-RWCA--ERAVERDAYTCDTLIRGLCGRGRTANALA 181

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
             ++M R    PD +TY+IL +     S    A K++ ++  KG  PDIVTY V++ G C
Sbjct: 182 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 241

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           Q G V++ ++  + + S G + N ++Y+++L  +C + R ++A  L+ EM   G  P++V
Sbjct: 242 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 301

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           T+++LI  LC++  V  A+++  ++     SPNS ++  +L   C+++ + +A  + D +
Sbjct: 302 TFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 361

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           +   C  D+V YN ++    + G +  AV+L  QL +K  +P ++++N++I G  K GK 
Sbjct: 362 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 421

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +A  LL+ +   GL+P  +TY+T     C E  I+  +    +++   I P  V Y  +
Sbjct: 422 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 481

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           I GLCK+ +   A+ L   M   G  P++ TY  +I        +++A  LL+++
Sbjct: 482 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 536



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 231/444 (52%), Gaps = 10/444 (2%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD  +YN ++ G C AG ++ A  +  +     VE DA T   L +G     + + A  V
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAV 182

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           + ++L +   PD+VTYT+L+   C+    ++ +KL + M  +G   +++ Y+V+++ +C+
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            GR+D+A+  L  + + G +P+ V+Y+I+++GLC  ++   A +L  EM  K   PN   
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
              ++  LC K ++  A    + +    C  + + YN ++  + K   + +A+     ++
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 362

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            +   P IV++N+L+   C++G+V  A  LL  +K  G  P  ++Y T ++   + G  +
Sbjct: 363 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 422

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             L LL EM +K + P  +TY+ +  GLC++ ++++A++    +  +G+ P+ + YN II
Sbjct: 423 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 482

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH--- 547
              CK ++   A  L   M  +   P  +TY ILI+GL   G +K A  LL  L      
Sbjct: 483 LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEE 542

Query: 548 ---NISLTKVAY-TTIIKAHCAEG 567
              ++ L  VA+ TT +    A G
Sbjct: 543 ILLDVHLIDVAFLTTFLPCSNANG 566



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 220/457 (48%), Gaps = 8/457 (1%)

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            PDA +   LI  L  +G   EA       G     PD + Y+ +  G+    Q+  A +
Sbjct: 95  RPDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMMAGYCGAGQVDAARR 149

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
              +   +  + D  T   LI G C  G     L + + ML +    +V+ Y++LL + C
Sbjct: 150 WCAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATC 206

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K     +A+ LL EM   G  PD+VTY++++ G+C++ +V  AI+    + S    PN+ 
Sbjct: 207 KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 266

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
           ++  +L GLC  E   +A      +    C  +VV +N++I    + G +  A+++  Q+
Sbjct: 267 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 326

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            +   SP+ +++N L++ FCK  K+  A   LD +   G  P  V+Y T + A C  G +
Sbjct: 327 PKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 386

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
              + LL +++ K   P  ++Y  VI GL K  K +EA++LL +M   G+ PD ITY+TI
Sbjct: 387 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 446

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
               C+   +  A +   ++    + P +  YN +I GLC   +  +A  L   +  +  
Sbjct: 447 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 506

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
              +  YT +I+    EG + +A     ++  +G EI
Sbjct: 507 MPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEEI 543



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 216/446 (48%), Gaps = 12/446 (2%)

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G ++EAL       R    PDA T + L K      + + A +V+         PD++ Y
Sbjct: 81  GELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAY 131

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             ++ GYC  G V+     R     +  + +      L+  +C  GR   AL +L EM  
Sbjct: 132 NAMMAGYCGAGQVDAA---RRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLR 188

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
               PD+VTY+IL+   CK+    +A++L +EM  K  +P+   +  ++ G+C++  + +
Sbjct: 189 RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 248

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A  +  +L    C  + V YNI++ G        +A +L  ++ +K   P++VTFN LI 
Sbjct: 249 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 308

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             C+ G V  A  +L+ I  +G  P++++Y   ++A+C++  + + +A L  M ++   P
Sbjct: 309 FLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 368

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             V+Y  ++  LC+  ++  AV+LL  +   G  P  I+YNT+I    K    ++A +LL
Sbjct: 369 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 428

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           N+M    L+P   TY+ +  GLC    +++A      +Q+  I    V Y  II   C  
Sbjct: 429 NEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKR 488

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYT 592
            + H A+  F  M+  G   +   YT
Sbjct: 489 RETHSAIDLFAYMIGNGCMPNESTYT 514



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 201/383 (52%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           R+ YT   +I GLC + R  +A+  L E   +   P VV+   ++   CK    + A  L
Sbjct: 158 RDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 217

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M   G  PD  +YN++++G+C  G +++A+EF  ++  +G EP+ ++Y+I+ KG   
Sbjct: 218 LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 277

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +   A +++ ++  KG  P++VT+ +LI   C+ G VE  L++ E +   G   N ++
Sbjct: 278 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLS 337

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ LL + CK  ++D+A+  L  M + G  PD+V+Y+ L+  LC+  +V  A++L +++ 
Sbjct: 338 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 397

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K  +P   ++  ++ GL +     EA    + ++      D++ Y+ +  G  +   I 
Sbjct: 398 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 457

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A++ + ++ +  I P+ V +N++I G CK  +   A  L   +  +G  P+  TYT  +
Sbjct: 458 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 517

Query: 421 NAYCEEGNIQRLLALLQEMETKA 443
                EG I+    LL E+ ++ 
Sbjct: 518 EGLAYEGLIKEARDLLDELCSRG 540



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 189/349 (54%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T +I+++  C++S  + A+  L E   K   P +V+ N +++  C+ G  + A    
Sbjct: 194 DVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL 253

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +  YG  P+  SYNI++ GLC A   E+A E   +MG+ G  P+ +T+++L       
Sbjct: 254 KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRK 313

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A +V++++   G  P+ ++Y  L+  +C+   +++ +   ++M+S+G   ++++Y
Sbjct: 314 GLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 373

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL+++C+SG +D A+ LL++++  G  P L++Y+ +I GL K  K  +A++L NEM S
Sbjct: 374 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 433

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K + P+   +  I  GLC ++ I +A   F  +       + VLYN +I G  K      
Sbjct: 434 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 493

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           A+ L+  +I     P+  T+  LI G    G + +AR LLD +   G E
Sbjct: 494 AIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEE 542



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 178/323 (55%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L D+++      ++ T ++V++G+CQ+ R+ DAI FL+        P+ VS N ++   C
Sbjct: 217 LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 276

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
                E A+ L   M + G  P+  ++N+LI  LC  G +E ALE    + ++G  P+++
Sbjct: 277 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSL 336

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+ L   F    ++  A   +  ++ +G  PDIV+Y  L+   C+ G V+  ++L   +
Sbjct: 337 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 396

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
             +G    +I+Y+ ++  + K+G+  EAL LL EM + GL+PD++TYS +  GLC++D++
Sbjct: 397 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 456

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             AI+ + ++    I PN+  + AI+LGLC++     A   F  +I + C+ +   Y I+
Sbjct: 457 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 516

Query: 350 IDGYVKLGNIGEAVQLYRQLIEK 372
           I+G    G I EA  L  +L  +
Sbjct: 517 IEGLAYEGLIKEARDLLDELCSR 539



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 115/268 (42%), Gaps = 32/268 (11%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           ML     R G+V  A+ V+ ++ +     +  +YN LL+                     
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLH--------------------- 343

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
                        C+Q ++  A+ FL     +   P +VS N +++  C+ G  +VA  L
Sbjct: 344 -----------AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 392

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              +   G  P   SYN +I GL  AG  +EALE  N+M   G++PD ITYS +A G   
Sbjct: 393 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 452

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +I  A +   K+   G  P+ V Y  +I G C+       + L   M+  G   N   
Sbjct: 453 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNEST 512

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           Y++L+  +   G I EA  LL E+ + G
Sbjct: 513 YTILIEGLAYEGLIKEARDLLDELCSRG 540



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 9/188 (4%)

Query: 22  MKELDLKVS------IQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDG 72
           M  LDL VS      I +YN+LL  L  +   D+  +L   +K       + + + VIDG
Sbjct: 355 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 414

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           L +  + ++A+  L E   K   P +++ + I +  C+    E A   F  +   G+ P+
Sbjct: 415 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 474

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
              YN +I GLC       A++    M  +G  P+  TY+IL +G      I  A  ++ 
Sbjct: 475 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLD 534

Query: 193 KLLIKGSD 200
           +L  +G +
Sbjct: 535 ELCSRGEE 542


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 152/536 (28%), Positives = 265/536 (49%), Gaps = 11/536 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  + +I++D L +  ++ +A++ L     +     V++   ++    K G  + A+ LF
Sbjct: 58  NNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLF 117

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
           C + +  L P+  +Y+ LI G C  G +  A    ++M      P+ ITYS L  G+   
Sbjct: 118 CNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQ 177

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A+KV++K++ K + P+I TY +L+ G  + G  +  L L   M   G K NV   
Sbjct: 178 GLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFIL 237

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
              +++M +SGR++EA  L+ +M + GLKPDLV Y+ L+ G  K  KV  A+ L  EM S
Sbjct: 238 DAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTS 297

Query: 302 KR-----ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           K      ++ N   +    LG  + E I      + ++       D+  YN M++G  K 
Sbjct: 298 KNVVFDIVTFNVLINCLFKLGKSDTESI------YSAMREMGLSPDLATYNTMLNGNFKK 351

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           GN   A++L+ ++  +++ P+ +T N +I G C+ G++ +A  +L  + L GL P++ TY
Sbjct: 352 GNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTY 411

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              +N   +      +L   + +    +      Y ++I  LCK    ++A  +L+DM  
Sbjct: 412 RILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEE 471

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+  D  TYN +I  +C    L++AF   + M    + P   TYN+L+ GL   G +  
Sbjct: 472 RGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHE 531

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           AD LL  +++  +      Y T++  HC   +  + +  +C+MV KGF    R Y 
Sbjct: 532 ADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYN 587



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 253/567 (44%), Gaps = 21/567 (3%)

Query: 76  QSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFS 135
           Q+ L++A+   +E  G    P VV+  +I+   CK G     K L   M K G++ +  S
Sbjct: 2   QNGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           Y IL+  L  AG + EAL     M   G   D I  ++L  G     QI  A  +   L 
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 121

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
                P+ +TY+ LI G C++G++         M  +    NVI YS L++   K G + 
Sbjct: 122 QLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 181

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           +A  +L +M      P++ TY+IL+ G  K      A+ LY++M    +  N F   A +
Sbjct: 182 DAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFV 241

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
             +     + EA      +       D+V Y  ++DG++K G +  A+ L +++  K + 
Sbjct: 242 NNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 301

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
             IVTFN LI    K GK +D   +   ++  GL P   TY T +N   ++GN    L L
Sbjct: 302 FDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALEL 360

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
             EM+++ + P  +T  ++I GLC+  +++ A+ +L++M ++G+ P   TY  ++    K
Sbjct: 361 WNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSK 420

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
            +      Q    +    L+     YNILI  LC  G  + A  +L  ++E  I      
Sbjct: 421 SRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTT 480

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
           Y  +I  +C    + +A   +                      MLS    PD E   ++L
Sbjct: 481 YNALIHGYCISSHLKRAFMTYST--------------------MLSERVSPDIETYNLLL 520

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPD 642
               + G +    +L + + K GL+P+
Sbjct: 521 GGLSKAGLIHEADDLLSEIKKRGLVPN 547



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/524 (25%), Positives = 244/524 (46%), Gaps = 37/524 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVY 64
           ++G + +A ++   + +L+L  +  TY++L+     L   +       +++  +   NV 
Sbjct: 106 KSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVI 165

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S +I+G  +Q  L DA   L++   K   P++ +   ++    K G+ ++A  L+  M
Sbjct: 166 TYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKM 225

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + GL  + F  +  ++ +  +G MEEA E    M   G++PD + Y+ L  GF    ++
Sbjct: 226 KQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKV 285

Query: 185 SGAWKVIQKLLIK----------------------------------GSDPDIVTYTVLI 210
           S A  + Q++  K                                  G  PD+ TY  ++
Sbjct: 286 SSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYSAMREMGLSPDLATYNTML 345

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G  + GN    L+L   M S+    N I  +++++ +C++GR++ A+ +L EM  +GL 
Sbjct: 346 NGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLY 405

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P   TY IL+    K  +    +Q +  + + ++  +   +  ++  LC+  M  +A   
Sbjct: 406 PTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAV 465

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
              +     I D   YN +I GY    ++  A   Y  ++ +R+SP I T+N L+ G  K
Sbjct: 466 LKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSK 525

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G + +A  LL  IK  GL P+A TY T M  +C+  N +  L +  EM  K   P    
Sbjct: 526 AGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRA 585

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           Y ++I    K  K+++A +L+ +M   GV+P   TY+ +I  +C
Sbjct: 586 YNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWC 629



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/547 (25%), Positives = 249/547 (45%), Gaps = 13/547 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T S +IDG C+   +  A   L E   K+  P+V++ +++++ Y K G    A  + 
Sbjct: 128 NYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVL 187

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+     P+  +Y IL+ G   AG  + AL+  + M + G++ +              
Sbjct: 188 RKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRS 247

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A +++ K+   G  PD+V YT L+ G+ + G V   L L + M S+    +++ +
Sbjct: 248 GRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTF 307

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL++ + K G+ D    +   M  +GL PDL TY+ ++ G  K+     A++L+NEM S
Sbjct: 308 NVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKS 366

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +++ PN+     ++ GLCE   +  A      +++         Y I+++   K      
Sbjct: 367 RKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADT 426

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            +Q +  L+  ++      +N LI   CK G    A  +L  ++  G+     TY   ++
Sbjct: 427 ILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIH 486

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC   +++R       M ++ + P   TY +++ GL K   + EA  LL ++   G+ P
Sbjct: 487 GYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVP 546

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +  TY T++   CK ++ ++  ++  +M +    P    YN+LI      G +K A  L+
Sbjct: 547 NACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELM 606

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG--FEISIRDYTKSFFCMM 599
             +Q   +S T   Y  +I   C             +M + G   +IS R   K  F  M
Sbjct: 607 NEMQTKGVSPTCTTYDILICGWCN----------LLKMPDLGSTLKISYRAEAKRLFIEM 656

Query: 600 LSNGFPP 606
              GF P
Sbjct: 657 NDRGFVP 663



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 159/376 (42%), Gaps = 14/376 (3%)

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
           Q+ + +A+ LY EM    I P+    G+IL GLC+   ++E ++    +       + V 
Sbjct: 2   QNGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y I++D   K G + EA+     +I +  +  ++    LI G  K+G++ +A  L   + 
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 121

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
              L P+ +TY+  ++  C+ G+I    + L EME K   P  +TY+ +I G  KQ  L 
Sbjct: 122 QLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 181

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           +A ++L  M      P+  TY  ++    K      A  L ++M    L+      +  +
Sbjct: 182 DAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFV 241

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           + +  +G ++ A+ L+  +    +    V YT ++      G V  A+    +M  K   
Sbjct: 242 NNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 301

Query: 586 ISI--------------RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
             I              +  T+S +  M   G  PD      ML    + G+  S  EL 
Sbjct: 302 FDIVTFNVLINCLFKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELW 361

Query: 632 AVMIKSGLLPDKFLIN 647
             M    L+P+    N
Sbjct: 362 NEMKSRKLIPNAITCN 377


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 225/406 (55%), Gaps = 5/406 (1%)

Query: 89  TAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           T  K++G   S+ S N ++S   K       + ++  M+K  +H +  ++NI I+GLC A
Sbjct: 154 TRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRA 213

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV---IQKLLIKGSDPDI 203
           G + +A +   DM   G+ P+ +TY+ L  G+         +K    ++++L     P+ 
Sbjct: 214 GKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNE 273

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           VT+  LI G+C+  NV    K  E M  QG K N++ Y+ L++ +C +G+++EA+ L  +
Sbjct: 274 VTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDK 333

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M  +GLKP++VTY+ LI G CK+  + +A ++++++  + + PN      ++   C++ M
Sbjct: 334 MVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGM 393

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           + E      S++    + +V  YN +I G  +  ++  A +L  ++  K +   +VT+N 
Sbjct: 394 MEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNI 453

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI G CKN K  +A +LL+ +   GL+P+ VTY T M+ YC EG ++  L +   ME + 
Sbjct: 454 LIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKER 513

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
             P  VTY V+IKG CK  KL+ A  LL +M   G+ P++ TY+ +
Sbjct: 514 KQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 216/398 (54%), Gaps = 7/398 (1%)

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           +IG+VE   K    M+ +    N+  +++ ++ +C++G++++A   + +M+A G+ P++V
Sbjct: 180 KIGDVEYVYK---EMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVV 236

Query: 275 TYSILIRGLCKQD---KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           TY+ L+ G CK+    K++KA     EM + +I PN      ++ G C+ E +  A+  F
Sbjct: 237 TYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAF 296

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           + +       ++V YN +I+G    G + EA+ L+ +++   + P+IVT+N+LI GFCK 
Sbjct: 297 EEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKK 356

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
             + +A ++ D +    L P+ +T+ T ++AYC+EG ++   +L   M  + I P   TY
Sbjct: 357 KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTY 416

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             +I GLC++  LQ A +LL +M   G+  D +TYN +I   CK    R A +LLN+M+ 
Sbjct: 417 NCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFN 476

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             L+P   TYN L+DG C+ G LK A  +   +++       V Y  +IK +C    +  
Sbjct: 477 LGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEA 536

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
           A     +M+EKG   +   Y       ML  GF PD E
Sbjct: 537 ANGLLNEMLEKGLNPNRTTYD-IVRLEMLEKGFSPDIE 573



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 206/415 (49%), Gaps = 41/415 (9%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVY 64
           +   + D  +V  +M +  +  ++ T+N  +  L      +   D  +D+K      NV 
Sbjct: 177 KENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVV 236

Query: 65  TNSIVIDGLCQQS---RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           T + ++DG C++    ++  A  F++E    +  P+ V+ N ++  +CK      AK  F
Sbjct: 237 TYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAF 296

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M K GL P+  +YN LI+GLC  G +EEA++  + M   G++P+ +TY+ L  GF   
Sbjct: 297 EEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKK 356

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A KV   +  +   P+++T+  +I  YC+ G +EEG  L   ML +G   NV  Y
Sbjct: 357 KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTY 416

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L++ +C+   +  A  LL EME  GLK D+VTY+ILI GLCK DK   A +L NEM +
Sbjct: 417 NCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFN 476

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             + PN                                    V YN ++DGY   G +  
Sbjct: 477 LGLKPNH-----------------------------------VTYNTLMDGYCMEGKLKA 501

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           A+ +  ++ ++R  P++VT+N LI G+CK  K+  A  LL+ +   GL P+  TY
Sbjct: 502 ALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 215/460 (46%), Gaps = 41/460 (8%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDL---YDDIKVS 57
           ML   Y +   +H A     + K+   K+S+ + N LL  L   + + D+   Y ++   
Sbjct: 135 MLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKR 194

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               N+ T +I I+GLC+  +L  A   +++                             
Sbjct: 195 RIHTNLNTFNIFINGLCRAGKLNKAEDAIED----------------------------- 225

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLC---IAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
                 M  +G+ P+  +YN L+ G C    AG M +A  F  +M  + + P+ +T++ L
Sbjct: 226 ------MKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTL 279

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             GF     ++ A K  +++  +G  P+IVTY  LI G C  G +EE + L + M+  G 
Sbjct: 280 IDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGL 339

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           K N++ Y+ L++  CK   + EA  +  ++    L P+++T++ +I   CK+  + +   
Sbjct: 340 KPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFS 399

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L + M  + I PN   +  ++ GLC K+ +  A+   + +       DVV YNI+IDG  
Sbjct: 400 LCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLC 459

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K      A +L  ++    + P+ VT+N+L+ G+C  GK+  A  +   ++    +P+ V
Sbjct: 460 KNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVV 519

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
           TY   +  YC+   ++    LL EM  K + P   TY +V
Sbjct: 520 TYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 136/260 (52%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+ T + +I+GLC   +L++AI    +  G    P++V+ NA+++ +CK    + A  +F
Sbjct: 307 NIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVF 366

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             + K  L P+  ++N +I   C  G MEE     + M   G+ P+  TY+ L  G    
Sbjct: 367 DDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRK 426

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A +++ ++  KG   D+VTY +LI G C+        KL   M + G K N + Y
Sbjct: 427 QDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTY 486

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C  G++  AL +   ME    +P++VTY++LI+G CK +K+  A  L NEM  
Sbjct: 487 NTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLE 546

Query: 302 KRISPNSFAHGAILLGLCEK 321
           K ++PN   +  + L + EK
Sbjct: 547 KGLNPNRTTYDIVRLEMLEK 566



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 3/262 (1%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYT 65
            G + +A+ +  KM  L LK +I TYN+L+       +M +   ++DD+   E   NV T
Sbjct: 321 NGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVIT 380

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + +ID  C++  +++          +   P+V + N +++  C+    + AK L   M 
Sbjct: 381 FNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEME 440

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             GL  D  +YNILI GLC       A +  N+M   G++P+ +TY+ L  G+ +  ++ 
Sbjct: 441 NKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLK 500

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  V  ++  +   P++VTY VLI GYC+I  +E    L   ML +G   N   Y ++ 
Sbjct: 501 AALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVR 560

Query: 246 SSMCKSGRIDEALGLLYEMEAV 267
             M + G   +  G LY + ++
Sbjct: 561 LEMLEKGFSPDIEGHLYNISSM 582



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 131/288 (45%), Gaps = 18/288 (6%)

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
           R   + +  + L+  + KN ++  A       K +G + S  +    ++A  +E  I  +
Sbjct: 125 RPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDV 184

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             + +EM  + I     T+ + I GLC+  KL +A   +EDM   G++P+ +TYNT++  
Sbjct: 185 EYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDG 244

Query: 493 FCK---CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           +CK      + KA   + +M  + + P   T+N LIDG C + ++  A      +Q+  +
Sbjct: 245 YCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGL 304

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC---MML---- 600
               V Y ++I   C  G + +A+  + +MV  G + +I  Y    + FC   MM     
Sbjct: 305 KPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATK 364

Query: 601 ------SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                      P+      M+ A+ + G +   F L + M+  G+LP+
Sbjct: 365 VFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPN 412



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 48/244 (19%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
            Y + GM+ +   + + M +  +  ++ TYN L                           
Sbjct: 387 AYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCL--------------------------- 419

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
                I GLC++  LQ A   L E   K     VV+ N ++   CK   +  A+ L   M
Sbjct: 420 -----IAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEM 474

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              GL P+  +YN L+ G C+ G ++ AL     M +   +P+ +TY++L KG+  ++++
Sbjct: 475 FNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKL 534

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  ++ ++L KG +P+  TY +                +R  ML +GF  ++  +   
Sbjct: 535 EAANGLLNEMLEKGLNPNRTTYDI----------------VRLEMLEKGFSPDIEGHLYN 578

Query: 245 LSSM 248
           +SSM
Sbjct: 579 ISSM 582


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 209/406 (51%), Gaps = 3/406 (0%)

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P   S N L+ GL  A  ++ A +      R  V PD  T++ +  G   + Q+  A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQ---IGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           V + +   G  P + TY  LI GYC+    GN+     L + M+  G     + + VL++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             CK+     A+ +  EM+  G+   +VTY+ LI GLC + KV + ++L  EM    +SP
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N    G +L G C+K M+ +A  + D +   N   DVV+Y I+IDGY +LG + +A+ + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             + +K ISP++ T+N LI GF ++G    A  LLD +K  G+E   VTY   + A C +
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +++ + LL EM    + P H+TY  +I+G C +  ++ A ++   M       + +TY
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           N  I+ FC+   + +A  LLN+M    L P   TY  + +G+   G
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 208/441 (47%), Gaps = 9/441 (2%)

Query: 181 LSQISGAWKVIQKLLIKGSD-----PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
           L++ S   +     L+ G       P   +   L+ G      V+   K     L +   
Sbjct: 129 LARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVS 188

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD---KVHKA 292
            ++  ++ ++S +C+ G++ +A  +  +++A GL P + TY+ LI G CK+     ++  
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
             L  EM    ISP +   G ++ G C+      A   F+ +        VV YN +I G
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
               G + E V+L  ++ +  +SP+ +TF  ++ GFCK G +ADA   +D +    +EP 
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            V YT  ++ Y   G ++  +A+ + M  K I P   TY  +I G  +    + A  LL+
Sbjct: 369 VVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +M   G+  D +TYN +I + C   ++RKA +LL++M    LEP   TYN +I G C  G
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           ++K+A  +   +++       V Y   IK  C  G + +A     +M++K    +   Y 
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITY- 547

Query: 593 KSFFCMMLSNGFPPDQEICEV 613
           ++    M+  G+ PD   C V
Sbjct: 548 ETIKEGMMEKGYTPDIRGCTV 568



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 187/355 (52%), Gaps = 7/355 (1%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQS---RLQDAILFLQETAGKEFGPSVVSLNAIM 105
           D+  DIK      +V T + +IDG C++     +    + L+E       P+ V+   ++
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 106 SRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE 165
           + YCK      A  +F  M + G+     +YN LI GLC  G +EE ++   +M   G+ 
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           P+ IT+  + KGF     ++ A   I  +  +  +PD+V YT+LI GY ++G +E+ + +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAV 391

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
           +E M  +G   NV  Y+ L++   +SG    A GLL EM+  G++ D+VTY++LI  LC 
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ--DV 343
           + +V KA++L +EM    + PN   +  I+ G C+K  I  A  Y     M  C +  +V
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSA--YEIRTRMEKCRKRANV 509

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           V YN+ I  + ++G + EA  L  ++++K + P+ +T+ ++  G  + G   D R
Sbjct: 510 VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIR 564



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 142/327 (43%), Gaps = 40/327 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y +      AV V  +MK+  +  S+ TYNSL                            
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSL---------------------------- 305

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
               I GLC + ++++ +  ++E       P+ ++   ++  +CK G    A      M 
Sbjct: 306 ----ISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           +  + PD   Y ILI G    G ME+A+     M + G+ P+  TY+ L  GF      S
Sbjct: 362 ERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR----S 417

Query: 186 GAWKVIQKLLI----KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           G W+    LL     KG + D+VTY VLI   C  G V + +KL + M   G + N + Y
Sbjct: 418 GDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTY 477

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++   C  G I  A  +   ME    + ++VTY++ I+  C+  K+ +A  L NEM  
Sbjct: 478 NTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537

Query: 302 KRISPNSFAHGAILLGLCEKEMITEAR 328
           K + PN   +  I  G+ EK    + R
Sbjct: 538 KCLVPNGITYETIKEGMMEKGYTPDIR 564



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 125/293 (42%), Gaps = 18/293 (6%)

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
           R  PS  + N+L+ G     +V  A +   +     + P   T+ T ++  C  G +++ 
Sbjct: 151 RHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKA 210

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQ---WKLQEAVQLLEDMYVIGVTPDQITYNTI 489
             + ++++   + P+  TY  +I G CK+     +     LL++M   G++P  +T+  +
Sbjct: 211 GDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I  +CK  +   A ++  +M    +  +  TYN LI GLC  G ++    L+  +++  +
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------KSFFCM----- 598
           S  ++ +  ++K  C +G +  A  +   M E+  E  +  YT      +    M     
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMA 390

Query: 599 ----MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               M   G  P+      ++  F + GD  S   L   M + G+  D    N
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYN 443


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 249/540 (46%), Gaps = 20/540 (3%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           +A++    +LG        +  ML  G+ P+   YN +I+ LC  G++ +A      +  
Sbjct: 354 SALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFE 413

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
             + PD  TY+ +  G      +  A +V  ++  +G +P+ VTY+ LI G C  G V E
Sbjct: 414 SEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNE 473

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
              L   M+  G        +  + ++C  G  ++A  L  +M+  G +P++ TY+ LI 
Sbjct: 474 AFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALIS 533

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           GLC    +  AI L++ M    + PN+  + A++  L E   I  A +  + +  +    
Sbjct: 534 GLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFT 593

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           ++V YN MI GY  LG+  +A+ +   ++++  S ++VT+N++I G+C +G    A R+L
Sbjct: 594 NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 653

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           D ++  G +P   +YT  +  +C+   ++    L  EM    + P  VTYT +I G CK 
Sbjct: 654 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD 713

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            KL  A  LLE M   G  P+  TYN +I    K  +   A +L   M    + P   TY
Sbjct: 714 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 773

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
             +IDGLC NG    A  +   + E       + Y+++I+A   EG V +A   F ++  
Sbjct: 774 TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 833

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                               +G  PD+     M+ A+   G +   F     MIK+G  P
Sbjct: 834 --------------------HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 873



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 247/496 (49%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+++  NA+++  CK G    A+ +   + +  + PD F+Y  +I G C    ++ AL+ 
Sbjct: 383 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 442

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            N M + G EP+ +TYS L  G     +++ A+ +I+++++ G  P   T T  I   C 
Sbjct: 443 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 502

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +G  E+  +L   M ++G + NV  Y+ L+S +C SG +  A+GL + M   G+ P+ VT
Sbjct: 503 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 562

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI  L +  ++  A  + N M    +  N   +  ++ G C      +A +  ++++
Sbjct: 563 YNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNML 622

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 ++V YN +I GY   GN   A+++   + +    P   ++  LI GFCK  K+ 
Sbjct: 623 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 682

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L + +   GL P+ VTYT  ++ YC++  +    +LL+ M+     P   TY V+I
Sbjct: 683 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 742

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GL KQ     A +L + M   G+ P+ +TY  +I   CK      A ++ N+M      
Sbjct: 743 HGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL 802

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   TY+ LI  L   G ++ A+ L   L+ H +   ++ Y  +I+A+   G V  A  F
Sbjct: 803 PNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNF 862

Query: 576 FCQMVEKGFEISIRDY 591
             +M++ G + ++  Y
Sbjct: 863 LGRMIKAGCQPTLWTY 878



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 170/632 (26%), Positives = 284/632 (44%), Gaps = 54/632 (8%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL--YNLRHT-DIMWDLYDDIKVSETPRNVY 64
            + G V DA  ++ K+ E ++     TY S++  +  +H  D    +++ +       N  
Sbjct: 397  KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 456

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T S +I+GLC   R+ +A   ++E       P+  +    +   C +G  E A  LF  M
Sbjct: 457  TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 516

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA--------- 175
               G  P+ ++Y  LI GLC++G ++ A+   + M R GV P+ +TY+ L          
Sbjct: 517  KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 576

Query: 176  --------------------------KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
                                      KG+ +L     A  V+  +L +G   ++VTY  +
Sbjct: 577  KYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 636

Query: 210  ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
            I GYC  GN    L++ ++M   G K +  +Y+ L+   CK  +++ A GL  EM   GL
Sbjct: 637  IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 696

Query: 270  KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
             P+ VTY+ LI G CK +K+  A  L   M      PN   +  ++ GL ++   + A  
Sbjct: 697  CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 756

Query: 330  YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
                +I      +VV Y  MIDG  K G+   A++++ ++IE+   P+++T++SLI    
Sbjct: 757  LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALG 816

Query: 390  KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
            + GKV +A  L   ++ HGL P  +TY   + AY   G ++     L  M      PT  
Sbjct: 817  QEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLW 876

Query: 450  TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            TY V+IKGL  ++       LL D  +  + PD +       SF      + A  +++  
Sbjct: 877  TYGVLIKGLKNEY-------LLADQRLAAL-PDVVPNC----SFGYQTTDQDAVSVMSAK 924

Query: 510  WLHNLEP--TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
             L  L+P  +    N L+  L   G    A+ LL S+    +   + AY +++ +     
Sbjct: 925  -LAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 983

Query: 568  DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
            +V  AM  F  M  +G E+ +  Y K   C +
Sbjct: 984  NVDLAMGVFKHMSTQGCEVHLNGY-KELICAL 1014



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 148/560 (26%), Positives = 267/560 (47%), Gaps = 4/560 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRN 62
           +S+  M     F +  + +  L++ +  Y++LL +L     T  + D Y  +       N
Sbjct: 326 HSKEAMARTMSF-LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 384

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           +   + VI+ LC+   + DA   +++    E  P   +  +++  +C+    + A  +F 
Sbjct: 385 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 444

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K G  P+  +Y+ LI+GLC +G + EA +   +M  HG+ P A T +        + 
Sbjct: 445 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 504

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               AW++   +  KG +P++ TYT LI G C  G ++  + L   M   G   N + Y+
Sbjct: 505 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 564

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++ + ++ RI  A  +L  M   GL  ++VTY+ +I+G C      KA+ + N M  +
Sbjct: 565 ALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 624

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             S N   +  I+ G C+    T A    D +    C  D   Y  +I G+ K+  +  A
Sbjct: 625 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 684

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L+ ++++  + P+ VT+ +LI G+CK+ K+  A  LL+ +K  G  P+  TY   ++ 
Sbjct: 685 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 744

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
             ++ N      L + M  + I P  VTYT +I GLCK      A+++   M   G  P+
Sbjct: 745 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 804

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TY+++IR+  +   + +A  L  ++  H L P   TY  +I+   ++G +++A   L 
Sbjct: 805 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 864

Query: 543 SLQEHNISLTKVAYTTIIKA 562
            + +     T   Y  +IK 
Sbjct: 865 RMIKAGCQPTLWTYGVLIKG 884



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 184/390 (47%), Gaps = 15/390 (3%)

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL+  L  YS L+  L +       +  Y+ M S+ + PN   + A++  LC+   + +A
Sbjct: 345 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA 404

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                 +  S    D   Y  MI G+ +  ++  A+Q++ Q+ ++   P+ VT+++LI G
Sbjct: 405 ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLING 464

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            C +G+V +A  L+  + LHG+ P+A T T  + A C+ G  +    L  +M+ K   P 
Sbjct: 465 LCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPN 524

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TYT +I GLC    L+ A+ L   M   GV P+ +TYN +I    + + ++ AF +LN
Sbjct: 525 VYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLN 584

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M  + L     TYN +I G C+ GD K A  ++ ++ +   S   V Y TIIK +C  G
Sbjct: 585 LMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSG 644

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICE 612
           +   A+     M + G +     YT+                 F  M+ +G  P++    
Sbjct: 645 NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYT 704

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            ++  + +   L +   L   M +SG  P+
Sbjct: 705 ALIDGYCKDEKLDTATSLLEHMKRSGCRPN 734



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 185/459 (40%), Gaps = 59/459 (12%)

Query: 62   NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            N+ T + +I G C       A+  L         P   S   ++  +CK+   E A GLF
Sbjct: 629  NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 688

Query: 122  CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              M+  GL P+  +Y  LI G C    ++ A      M R G  P+  TY++L  G    
Sbjct: 689  NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 748

Query: 182  SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +  SGA ++ + ++ +G  P++VTYT +I G C+ G+    L++   M+ QG   N++ Y
Sbjct: 749  NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 808

Query: 242  SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            S L+ ++ + G+++EA  L  E+E  GL PD +TY  +I       KV  A      M  
Sbjct: 809  SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 868

Query: 302  KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-------QDVV---------- 344
                P  + +G ++ GL  + ++ + R+     ++ NC        QD V          
Sbjct: 869  AGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 928

Query: 345  -------LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL------------- 384
                   + N ++      G   EA +L   +I + + P    +NSL             
Sbjct: 929  DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLA 988

Query: 385  ----------------------IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
                                  I   C+  +  +AR   + + +    P  V     ++ 
Sbjct: 989  MGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 1048

Query: 423  YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
               +G     +  L  MET+   P+   YT++ +   K+
Sbjct: 1049 LLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKK 1087



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 163/357 (45%), Gaps = 24/357 (6%)

Query: 45   DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
            D    L + +K S    NV T +++I GL +Q+    A    +    +   P+VV+  A+
Sbjct: 717  DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 776

Query: 105  MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
            +   CK G   +A  +F  M++ G  P+  +Y+ LI  L   G +EEA     ++ RHG+
Sbjct: 777  IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 836

Query: 165  EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY----------- 213
             PD ITY  + + + +  ++  A+  + +++  G  P + TY VLI G            
Sbjct: 837  IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRL 896

Query: 214  ---------CQIGNVEEGLKLREVMLSQGFKLN----VIAYSVLLSSMCKSGRIDEALGL 260
                     C  G          VM ++  +L+    V   + L+S++  +GR  EA  L
Sbjct: 897  AALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANEL 956

Query: 261  LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
            L  M + GL PD   Y+ L+  L +   V  A+ ++  M ++    +   +  ++  LC+
Sbjct: 957  LGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQ 1016

Query: 321  KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
                 EAR+ F++++M     D V+  ++IDG ++ G     ++    +  +R  PS
Sbjct: 1017 LHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 1073


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 151/576 (26%), Positives = 282/576 (48%), Gaps = 6/576 (1%)

Query: 30  SIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           ++ +YN++++   R  ++    +L+ ++       +V T S  ID LC+   +  A L L
Sbjct: 226 NVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVL 285

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           ++     F P  V+ N ++  Y  LG  +   G+F  M + GL PD F+ N  +  LC  
Sbjct: 286 RQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKH 345

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G  +EA EF + M   G +PD +TYS+L  G+     +     +   +   G   D   Y
Sbjct: 346 GKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVY 405

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            +LI  Y + G ++E + +   M  +G   +   Y  ++++  + GR+ +A+    +M A
Sbjct: 406 NILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIA 465

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS-PNSFAHGAILLGLCEKEMIT 325
           +GLKPD + Y+ LI+G C    + KA +L +EM S+ I  PN+    +I+  LC++  + 
Sbjct: 466 MGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVV 525

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA+  FD +I      DV+ +N +IDGY  +G + +A  +   +I   I P +VT+++L+
Sbjct: 526 EAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALL 585

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G+C+NG++ D   L   +   G++P+ +TY   ++    +G       +  EM      
Sbjct: 586 DGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTT 645

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
               T  +++ GLC+     EA+ L + +  + V  +    NT+I +  K +   +A +L
Sbjct: 646 MDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANEL 705

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
            + +    L P ++TY ++I  L   G ++ AD +   +++   + +      II+    
Sbjct: 706 FDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLE 765

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
           +G++ KA  +  ++   G  IS+   T S    + S
Sbjct: 766 KGEISKAGNYLSKV--DGKTISLEASTASLMLSLFS 799



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 255/532 (47%), Gaps = 39/532 (7%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE- 154
           P+V + N +M   C+     V   LF   LK GL  D    NIL+  LC A   ++A+  
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK--GSDPDIVTYTVLICG 212
             + M   GVEPD I+YS + K     S+   A  ++  ++ K  G  P++V+Y  +I G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           + + G V +   L   M+ QG   +V+ YS  + ++CK+  +D+A  +L +M + G +PD
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 273 LVTYSILIRG-----------------------------------LCKQDKVHKAIQLYN 297
            VTY+ +I G                                   LCK  K  +A + ++
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            M +K   P+   +  +L G   +  + +    F+S+  +  + D  +YNI+ID Y K G
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EA+ ++ Q+ E+ + P   T+ ++I  F + G++ADA    + +   GL+P  + Y 
Sbjct: 417 MMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYN 476

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIG-PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           + +  +C  GN+ +   L+ EM ++ I  P  V +  +I  LCK+ ++ EA  + + +  
Sbjct: 477 SLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIH 536

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
           IG  PD IT+N++I  +     + KAF +L+ M    +EP   TY+ L+DG C NG + +
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDD 596

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
              L   +    +  T + Y  I+     +G    A     +M+E G  + I
Sbjct: 597 GLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDI 648



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 230/495 (46%), Gaps = 19/495 (3%)

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK- 224
           P   TY+IL        + +  + +  + L  G   D++   +L+   C     ++ +  
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM--EAVGLKPDLVTYSILIRG 282
           L   M   G + + I+YS +L S+C+  R   AL LL+ M  ++ G  P++V+Y+ +I G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
             ++ +V KA  L++EM  + + P+   + + +  LC+   + +A +    +I +    D
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
            V YN MI GY  LG   E   ++R++  + + P I T NS +   CK+GK  +A    D
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
           ++   G +P  VTY+  ++ Y  EG +  +L L   ME   I   H  Y ++I    K+ 
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            + EA+ +   M   GV PD  TY T+I +F +   L  A    NQM    L+P +  YN
Sbjct: 417 MMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYN 476

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTK-VAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
            LI G C++G+L  A  L+  +    I     V + +II + C EG V +A   F  ++ 
Sbjct: 477 SLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIH 536

Query: 582 KG-------FEISIRDY------TKSFFCM--MLSNGFPPDQEICEVMLIAFHQGGDLGS 626
            G       F   I  Y       K+F  +  M+S G  PD      +L  + + G +  
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDD 596

Query: 627 VFELAAVMIKSGLLP 641
              L   M+  G+ P
Sbjct: 597 GLILFREMLSKGVKP 611



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 120/485 (24%), Positives = 220/485 (45%), Gaps = 36/485 (7%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +++T +  +  LC+  + ++A  F    A K   P +V+ + ++  Y   G+      LF
Sbjct: 331 DIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLF 390

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G+  D   YNILI      G M+EA+     M   GV PDA TY  +   F  +
Sbjct: 391 NSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRM 450

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF-KLNVIA 240
            +++ A     +++  G  PD + Y  LI G+C  GN+ +  +L   M+S+G  + N + 
Sbjct: 451 GRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVF 510

Query: 241 YSVLLSSMCKSGRI-----------------------------------DEALGLLYEME 265
           ++ +++S+CK GR+                                   ++A G+L  M 
Sbjct: 511 FNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMI 570

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
           +VG++PD+VTYS L+ G C+  ++   + L+ EM SK + P +  +G IL GL       
Sbjct: 571 SVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTV 630

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
            A+     +I S    D+    I++ G  +     EA+ L+++L    +  +I   N++I
Sbjct: 631 GAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMI 690

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
               K  K  +A  L D+I   GL P+A TY   +    +EG+++    +   ME     
Sbjct: 691 DAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCA 750

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P+      +I+ L ++ ++ +A   L  +    ++ +  T + ++  F +    R+  + 
Sbjct: 751 PSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKS 810

Query: 506 LNQMW 510
           L  M+
Sbjct: 811 LPAMY 815



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 219/472 (46%), Gaps = 4/472 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDIKVSETPRNVY 64
           + G   +A      M     K  + TY+ LL+          M +L++ ++ +    +  
Sbjct: 344 KHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHS 403

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             +I+ID   ++  + +A+L   +   +   P   +   +++ + ++G    A   F  M
Sbjct: 404 VYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQM 463

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV-EPDAITYSILAKGFHLLSQ 183
           +  GL PD   YN LI G C+ G++ +A E  ++M   G+  P+ + ++ +        +
Sbjct: 464 IAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGR 523

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A  +   ++  G  PD++T+  LI GY  +G +E+   + + M+S G + +V+ YS 
Sbjct: 524 VVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSA 583

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           LL   C++GRID+ L L  EM + G+KP  +TY I++ GL    +   A ++ +EM    
Sbjct: 584 LLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG 643

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            + +    G IL GLC      EA   F  L   N   ++ + N MID   K+    EA 
Sbjct: 644 TTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAN 703

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L+  +    + P+  T+  +I    K G V +A  +   ++  G  PS+      +   
Sbjct: 704 ELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVL 763

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
            E+G I +    L +++ K I     T ++++    ++ K +E ++ L  MY
Sbjct: 764 LEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPAMY 815



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 185/394 (46%), Gaps = 6/394 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDD----IKVSETP 60
            Y + GM+ +A+ +  +M+E  +     TY +++        + D  D     I +   P
Sbjct: 411 AYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG-PSVVSLNAIMSRYCKLGFAEVAKG 119
             +  NS+ I G C    L  A   + E   +    P+ V  N+I++  CK G    A+ 
Sbjct: 471 DTIVYNSL-IQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQD 529

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F L++  G  PD  ++N LI G  + G ME+A    + M   G+EPD +TYS L  G+ 
Sbjct: 530 IFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYC 589

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +I     + +++L KG  P  +TY +++ G    G      K+   M+  G  +++ 
Sbjct: 590 RNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIS 649

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
              ++L  +C++   DEA+ L  ++ A+ +K ++   + +I  + K  K  +A +L++ +
Sbjct: 650 TCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSI 709

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            +  + PN+  +G ++  L ++  + EA   F  +  S C     L N +I   ++ G I
Sbjct: 710 SATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEI 769

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
            +A     ++  K IS    T + ++  F + GK
Sbjct: 770 SKAGNYLSKVDGKTISLEASTASLMLSLFSRKGK 803



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 23/240 (9%)

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ- 469
           P+  TY   M+  C         AL        +    +   +++K LC   +  +AV  
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN--LEPTSATYNILIDG 527
           LL  M  +GV PD I+Y+T+++S C+    ++A  LL+ M   +    P   +YN +I G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
               G++  A  L   + +  +    V Y++ I A C    + KA            E+ 
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKA------------ELV 284

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +R         M+SNGF PD+     M+  +   G       +   M + GL+PD F  N
Sbjct: 285 LRQ--------MISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCN 336


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 146/531 (27%), Positives = 255/531 (48%), Gaps = 4/531 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDIKVSETPRNVYTN 66
           G +    F   KM+E    ++  +YN L++ L  + +     ++Y  + +     ++ T 
Sbjct: 173 GGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTF 232

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S ++    ++   +     L+E       P++ +    +    + G  + A  +   M  
Sbjct: 233 SALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMED 292

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD  +Y +LI  LC AG +++A+E    M     +PD +TY  +   F     +  
Sbjct: 293 DGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGR 352

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
             +   ++   G  PD++T+T+L+   C+ GN++E   L +VM  QG   N+  Y+ L+S
Sbjct: 353 VKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLIS 412

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            + +  R+D+AL L   ME +G+ P   TY + I    K  +  KA++ + +M  + I+P
Sbjct: 413 GLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAP 472

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N  A  A L  L E   + EA++ F+ L  +    D V YN+M+  Y K G + EA++L 
Sbjct: 473 NIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELL 532

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             + E +  P I+  NSLI    K G+V +A ++   +K   L P+ VTY T +    +E
Sbjct: 533 SDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKE 592

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +QR + L   M      P  +T+  ++  LCK  ++  A+++L  M  +   PD +T+
Sbjct: 593 GQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTF 652

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           NTII      K +  A  L +QM    L P   T   L+ G+  NG +++A
Sbjct: 653 NTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDA 702



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/596 (24%), Positives = 277/596 (46%), Gaps = 6/596 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G + +A  ++  M++  +  ++ TYN+L+  L      D   DL+++++        Y
Sbjct: 381 KAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAY 440

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T  + ID   +  R   A+   ++   +   P++V+ NA +    ++G    AK +F  +
Sbjct: 441 TYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRL 500

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              GL PD+ +YN+++     AG ++EA+E  +DM  +  EPD I  + L    +   ++
Sbjct: 501 KSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRV 560

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             AWK+  +L      P +VTY  LI G  + G V+  ++L   M   G   N I ++ +
Sbjct: 561 DEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTI 620

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L  +CK+  +D AL +LY+M  +   PD++T++ +I GL  + +V  AI L+++M  K +
Sbjct: 621 LDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKML 679

Query: 305 SPNSFAHGAILLGLCEKEMITEA-RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           +P+      +L G+ +  ++ +A ++  D +       D   +  ++ G +      + +
Sbjct: 680 TPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTI 739

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL-LDTIKLHGLEPSAVTYTTFMNA 422
               +L+  R+         +I   CK+ +   A+ + +   K  G++P+  +Y   +  
Sbjct: 740 LFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEG 799

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +    N +    L  EM+     P   TY +++    K  K+ E  +L E M      P+
Sbjct: 800 FLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPN 859

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            IT+N II +  K   L KA  L   +   +  PT  TY  L+DGL  +G L+ A  L  
Sbjct: 860 TITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFE 919

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            + ++        Y  +I      GDV+ A   F +MV +G    ++ YT    C+
Sbjct: 920 EMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCL 975



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 173/714 (24%), Positives = 308/714 (43%), Gaps = 98/714 (13%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
           V  R G + +A  ++ +M++      + TY  L+  L      D   +L+  +K S    
Sbjct: 273 VLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKP 332

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +  T   ++D       L     F  E     + P V++   +++  CK G  + A  L 
Sbjct: 333 DRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLL 392

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M K G+ P+  +YN LI GL     +++AL+  N+M   GV P A TY +    +   
Sbjct: 393 DVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKS 452

Query: 182 SQISGAWKVIQKLLIKGSDPDIV-----------------------------------TY 206
            +   A +  +K+ I+G  P+IV                                   TY
Sbjct: 453 GRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTY 512

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            +++  Y + G V+E ++L   M     + ++I  + L++++ K+GR+DEA  +   ++ 
Sbjct: 513 NMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKD 572

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           + L P +VTY+ LI GL K+ +V +A++L+  M      PN+     IL  LC+ + +  
Sbjct: 573 MKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDL 632

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A      +   NC+ DV+ +N +I G V    + +A+ L+ Q+ +K ++P  VT  +L+ 
Sbjct: 633 ALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLP 691

Query: 387 GFCKNGKVADA----------------RRLLDTIKLHGLEPSAVTYTTFM-------NAY 423
           G  KNG + DA                RR  + + + G+   A T  T +          
Sbjct: 692 GVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDL-MGGILTQAGTEKTILFGDRLVCGRV 750

Query: 424 CEEGNI------------QRLLA---LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           C++G++            Q L+A    ++  +   + PT  +Y  +I+G       + A 
Sbjct: 751 CKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAW 810

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            L  +M   G  PD  TYN ++ +  K   + + F+L  QM   + +P + T+NI+I  L
Sbjct: 811 NLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANL 870

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
             +  L  A  L   L   + S T   Y  ++      G + +A   F +MV        
Sbjct: 871 VKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMV-------- 922

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            DY           G  P+  I  +++  F + GD+ +  EL   M++ G+ PD
Sbjct: 923 -DY-----------GCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPD 964



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 149/598 (24%), Positives = 266/598 (44%), Gaps = 80/598 (13%)

Query: 1    MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVS 57
            M+   YS+ G V +A+ +++ M E   +  I   NSL   LY     D  W ++  +K  
Sbjct: 514  MMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDM 573

Query: 58   ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            +    V T + +I GL ++ ++Q A+       G    P+ ++ N I+   CK    ++A
Sbjct: 574  KLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLA 633

Query: 118  KGLFCLMLKYGLHPDAFSYNILIHGLCIA------------------------------- 146
              +   M      PD  ++N +IHGL I                                
Sbjct: 634  LKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGV 693

Query: 147  ---GSMEEALEFTND-MGRHGVEPDAITYSILAKGFHLLSQISGAWKVI----------- 191
               G ME+A +   D + R GV  D   +  L  G  +L+Q +G  K I           
Sbjct: 694  VKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGG--ILTQ-AGTEKTILFGDRLVCGRV 750

Query: 192  -----------------------QKLLIK-----GSDPDIVTYTVLICGYCQIGNVEEGL 223
                                   Q + I+     G  P + +Y  LI G+  + N E   
Sbjct: 751  CKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAW 810

Query: 224  KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
             L   M + G   +V  Y++LL +  KSG+I+E   L  +M     KP+ +T++I+I  L
Sbjct: 811  NLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANL 870

Query: 284  CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
             K + + KA+ L+ ++ S   SP    +G +L GL +   + EA+  F+ ++   C  + 
Sbjct: 871  VKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNN 930

Query: 344  VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
             +YNI+I+G+ K G++  A +L+++++ + I P + ++ SL+   C+ G+V DA    + 
Sbjct: 931  AIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEK 990

Query: 404  IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
            +K  GL   ++ Y   ++       I+  L L  EM+++ I P   TY  +I  L     
Sbjct: 991  LKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGM 1050

Query: 464  LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            +++A +L E++  IG+ P+  TYN +IR +    +   A+ +  +M +    P + T+
Sbjct: 1051 VEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTF 1108



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 241/519 (46%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           R++ T  I+  GL  +  L+       +     F  +  S N ++    + G    A  +
Sbjct: 157 RDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEM 216

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           +  M+  GL P   +++ L+         E       +M   G++P+  TY+I  +    
Sbjct: 217 YRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGR 276

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +I  A ++++++   G  PD+VTYTVLI   C  G +++ ++L   M +   K + + 
Sbjct: 277 AGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVT 336

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y  +L      G +        EMEA G  PD++T++IL+  LCK   + +A  L + M 
Sbjct: 337 YITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMR 396

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            + + PN   +  ++ GL     + +A   F+++     +     Y + ID Y K G   
Sbjct: 397 KQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSD 456

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A++ + ++  + I+P+IV  N+ +Y   + G++ +A+ + + +K +GL P +VTY   M
Sbjct: 457 KALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMM 516

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             Y + G +   + LL +M      P  +    +I  L K  ++ EA ++   +  + + 
Sbjct: 517 KCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLA 576

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P  +TYNT+I    K   +++A +L   M  +   P + T+N ++D LC N ++  A  +
Sbjct: 577 PTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKM 636

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           L  +   N     + + TII     E  V  A+  F QM
Sbjct: 637 LYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM 675



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/506 (23%), Positives = 218/506 (43%), Gaps = 15/506 (2%)

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           N M    ++ D  TY I+ KG  +   +        K+   G   +  +Y  LI    Q 
Sbjct: 148 NLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQS 207

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G   E L++   M+ +G K ++  +S L+ +  K    +    LL EME++GLKP++ TY
Sbjct: 208 GLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTY 267

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +I IR L +  ++ +A ++   M      P+   +  ++  LC    + +A   F  +  
Sbjct: 268 TICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKA 327

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           S+   D V Y  M+D +   G++G   + + ++     +P ++TF  L+   CK G + +
Sbjct: 328 SSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDE 387

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  LLD ++  G+ P+  TY T ++       +   L L   MET  + PT  TY + I 
Sbjct: 388 AFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFID 447

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
              K  +  +A++  E M + G+ P+ +  N  + S  +   LR+A  + N++  + L P
Sbjct: 448 FYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAP 507

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            S TYN+++      G +  A  LL  + E+      +   ++I      G V +A   F
Sbjct: 508 DSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMF 567

Query: 577 CQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQG 621
           C++ +     ++  Y                   F  M  NG PP+      +L    + 
Sbjct: 568 CRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKN 627

Query: 622 GDLGSVFELAAVMIKSGLLPDKFLIN 647
            ++    ++   M     +PD    N
Sbjct: 628 DEVDLALKMLYKMTTMNCMPDVLTFN 653



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 130/627 (20%), Positives = 263/627 (41%), Gaps = 41/627 (6%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
            Y ++G    A+    KMK   +  +I   N+ LY+L     + +   +++ +K +    +
Sbjct: 449  YGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPD 508

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
              T ++++    +  ++ +AI  L + +  +  P ++ +N++++   K G  + A  +FC
Sbjct: 509  SVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFC 568

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             +    L P   +YN LI GL   G ++ A+E    M  +G  P+ IT++ +        
Sbjct: 569  RLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKND 628

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            ++  A K++ K+      PD++T+  +I G      V + + L   M  +    + +   
Sbjct: 629  EVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLC 687

Query: 243  VLLSSMCKSGRIDEALGLLYE-MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
             LL  + K+G +++A  +  + +  +G+  D   +  L+ G+  Q    K I   + +  
Sbjct: 688  TLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVC 747

Query: 302  KRISPNSFAHGAILLGLCE-KEMITEARMY------------------------------ 330
             R+  +      I+  LC+ K+ +    ++                              
Sbjct: 748  GRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDE 807

Query: 331  -----FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
                 F  +  + C  DV  YN+++D + K G I E  +LY Q+I     P+ +T N +I
Sbjct: 808  MAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIII 867

Query: 386  YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
                K+  +  A  L   +      P+  TY   ++   + G ++    L +EM      
Sbjct: 868  ANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCR 927

Query: 446  PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
            P +  Y ++I G  K   +  A +L + M   G+ PD  +Y +++   C+   +  A   
Sbjct: 928  PNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHY 987

Query: 506  LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
              ++    L   S  YN++IDGL  +  ++ A  L   +Q   I+     Y ++I     
Sbjct: 988  FEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGV 1047

Query: 566  EGDVHKAMTFFCQMVEKGFEISIRDYT 592
             G V +A   + ++   G E ++  Y 
Sbjct: 1048 AGMVEQAGKLYEELQFIGLEPNVFTYN 1074



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 192/380 (50%), Gaps = 39/380 (10%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR--HTDIM-WDLYDDIKVSETPRNVY 64
            +  +V  +VF I   KEL +K ++++YN L+      H D M W+L+ ++K +    +V+
Sbjct: 768  KQALVAQSVF-IRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVF 826

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T ++++D   +  ++ +  LF                             E+ + + C  
Sbjct: 827  TYNLLLDAHGKSGKINE--LF-----------------------------ELYEQMICSS 855

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             K    P+  ++NI+I  L  + S+++AL+   D+      P   TY  L  G     ++
Sbjct: 856  CK----PNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRL 911

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
              A ++ ++++  G  P+   Y +LI G+ + G+V    +L + M+ +G + ++ +Y+ L
Sbjct: 912  EEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSL 971

Query: 245  LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
            +  +C++GR+D+AL    +++  GL  D + Y+++I GL +  ++ +A+ LY+EM S+ I
Sbjct: 972  VGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGI 1031

Query: 305  SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            +P+ F + +++L L    M+ +A   ++ L       +V  YN +I GY   GN   A  
Sbjct: 1032 NPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYA 1091

Query: 365  LYRQLIEKRISPSIVTFNSL 384
            +Y++++    SP+  TF  L
Sbjct: 1092 VYKRMMVGGCSPNTGTFAQL 1111



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 90/410 (21%), Positives = 174/410 (42%), Gaps = 15/410 (3%)

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           R+ + + +   M+   +K DL TY I+ +GL  +  + +    + +M       N++++ 
Sbjct: 139 RVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYN 198

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  L +  +  EA   +  +++      +  ++ ++    K  +      L  ++   
Sbjct: 199 GLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESL 258

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            + P+I T+   I    + G++ +A R++  ++  G  P  VTYT  ++A C  G +   
Sbjct: 259 GLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDA 318

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           + L  +M+  +  P  VTY  ++        L    +   +M   G  PD IT+  ++ +
Sbjct: 319 MELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNA 378

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            CK  ++ +AF LL+ M    + P   TYN LI GL     L +A  L  +++   +  T
Sbjct: 379 LCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPT 438

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF---------------EISIRDYTKSFFC 597
              Y   I  +   G   KA+  F +M  +G                E+      K  F 
Sbjct: 439 AYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFN 498

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            + SNG  PD     +M+  + + G +    EL + M ++   PD  +IN
Sbjct: 499 RLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVIN 548



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 133/282 (47%), Gaps = 3/282 (1%)

Query: 1    MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVS 57
            +L   + ++G +++   +  +M     K +  T+N ++ NL  +   D   DL+ D+   
Sbjct: 830  LLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSG 889

Query: 58   ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            +      T   ++DGL +  RL++A    +E       P+    N +++ + K G    A
Sbjct: 890  DFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTA 949

Query: 118  KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              LF  M++ G+ PD  SY  L+  LC AG +++AL +   + + G+  D+I Y+++  G
Sbjct: 950  CELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDG 1009

Query: 178  FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                 +I  A  +  ++  +G +PD+ TY  LI      G VE+  KL E +   G + N
Sbjct: 1010 LGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPN 1069

Query: 238  VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            V  Y+ L+     SG  D A  +   M   G  P+  T++ L
Sbjct: 1070 VFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 251/510 (49%), Gaps = 4/510 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y   G   DA  ++ +++E     S+ ++NS+L  L   R  D    L++ +K    P N
Sbjct: 329 YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP-N 387

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T +I+ID LC   R+++A   L E       P+++++N ++ R CK    E A  +F 
Sbjct: 388 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 447

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
              + G +PD  +Y  LI GL   G ++EA      M   G   + + Y+ L + F +  
Sbjct: 448 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 507

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +     K+ ++L+ +G  PD+      +    + G VE+G  + E + S GF  +V +YS
Sbjct: 508 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 567

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L+  + K+G+  E   + + M+  G   D   Y+ ++ G CK  KVHKA ++  EM  K
Sbjct: 568 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 627

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P    +GAI+ GL + + + EA M F+         +VVLY+ +IDG+ K+G I EA
Sbjct: 628 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 687

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +  ++++K ++P++ T+NSL+    K  ++ +A     ++K     P+  TY+  +N 
Sbjct: 688 YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILING 747

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C      +     Q+M+ + + P  VTYT +I GL K   + +A  L E     G  PD
Sbjct: 748 LCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPD 807

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
             ++N +I          +A+Q+  +  L 
Sbjct: 808 AASFNALIEGMSNANRAMEAYQVFEETRLR 837



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 153/629 (24%), Positives = 283/629 (44%), Gaps = 39/629 (6%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSE 58
           LA    R   + DAV  +A M+ L  + +   Y  L   L   R  +   +L   ++   
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
               V+  + ++  L ++ ++ DA+  + E  G    P +V  N  +  + K G  ++A 
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 269

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             F  +   GL PD  SY  +I  LC AG + EA E    M      P A  Y+ +  G+
Sbjct: 270 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 329

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               +   A+K++++L  +G  P +V++  ++    +   V+E L L EVM  +  + N 
Sbjct: 330 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNS 388

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y++++  +C  GR++EA  +L EME   L P+L+T +I++  LCK  K+ +A +++  
Sbjct: 389 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 448

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEA-RMY--------------------------- 330
              +  +P+   + +++ GL +K  + EA R++                           
Sbjct: 449 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 508

Query: 331 -------FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
                  F  LI   C  D+ L N  +D   K G + +   ++  +      P + +++ 
Sbjct: 509 KEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSI 568

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI+G  K G+  +   +   +K  G    A  Y   ++ +C+ G + +   +L+EM+ K 
Sbjct: 569 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 628

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           + PT  TY  ++ GL K  +L EA  L E+    G+  + + Y+++I  F K   + +A+
Sbjct: 629 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 688

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            +L +M    L P   T+N L+D L    ++  A     S++E         Y+ +I   
Sbjct: 689 LILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 748

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           C     +KA  F+  M ++G   ++  YT
Sbjct: 749 CRVQKYNKAFVFWQDMQKQGLVPNVVTYT 777



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 145/587 (24%), Positives = 273/587 (46%), Gaps = 4/587 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNV-- 63
           + + G V  A     ++K   LK    +Y S+++ L     + +  +     E  R+V  
Sbjct: 259 FGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPC 318

Query: 64  -YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            Y  + +I G     R +DA   L+    +   PSVVS N+I++   K    + A  LF 
Sbjct: 319 AYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE 378

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +M K    P++ +YNI+I  LC+ G +EEA    ++M    + P+ +T +I+        
Sbjct: 379 VM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR 437

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A+K+ +    +G +PD VTY  LI G  + G V+E  +L E ML  G   N + Y+
Sbjct: 438 KLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT 497

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+ +    GR ++   +  E+   G KPDL   +  +  + K  +V K   ++ ++ S 
Sbjct: 498 SLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSY 557

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P+  ++  ++ GL +     E    F ++       D   YN ++DG+ K G + +A
Sbjct: 558 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 617

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            ++  ++ EK + P++ T+ +++ G  K  ++ +A  L +  K  G+E + V Y++ ++ 
Sbjct: 618 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 677

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           + + G I     +L+EM  K + P   T+  ++  L K  ++ EA+   + M  +   P+
Sbjct: 678 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPN 737

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             TY+ +I   C+ +   KAF     M    L P   TY  +I GL   G++ +A  L  
Sbjct: 738 TYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFE 797

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             + +       ++  +I+         +A   F +   +G  I+I+
Sbjct: 798 RFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIK 844



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/574 (22%), Positives = 251/574 (43%), Gaps = 53/574 (9%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +L YGL   A ++  L   L  A  +++A+     M R    P    Y++L        +
Sbjct: 137 VLGYGLPNQACAH--LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARR 194

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A ++++++   G +  +  +T L+    + G V + L L + +     + +++ Y+V
Sbjct: 195 PERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNV 254

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
            +    K+G +D A    +E++A GLKPD V+Y+ +I  LCK  ++ +A +L+ +M ++R
Sbjct: 255 CIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER 314

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P ++A+  +++G        +A    + L    CI  VV +N ++    K   + EA+
Sbjct: 315 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 374

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L+ ++++K   P+  T+N +I   C  G+V +A R+LD ++   L P+ +T    ++  
Sbjct: 375 SLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 433

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+   ++    + +    +   P  VTY  +I GL K+ ++ EA +L E M   G   + 
Sbjct: 434 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 493

Query: 484 ITYNTIIRSF--------------------C---------------KCKDLRKAFQLLNQ 508
           + Y ++IR+F                    C               K  ++ K   +   
Sbjct: 494 VVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFED 553

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           +  +   P   +Y+ILI GL   G  +    +  ++++   +L   AY  ++   C  G 
Sbjct: 554 IRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGK 613

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEV 613
           VHKA     +M EK  + ++  Y                   F    S G   +  +   
Sbjct: 614 VHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSS 673

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           ++  F + G +   + +   M+K GL P+ +  N
Sbjct: 674 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 707



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 180/376 (47%), Gaps = 4/376 (1%)

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           K+ E M   G+ L   A + L +++ ++ R+D+A+  +  M  +  +P    Y++LI  L
Sbjct: 130 KVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGAL 189

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
            +  +  +A++L  +M              ++  L  +  + +A    D +  S    D+
Sbjct: 190 AEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDI 249

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           VLYN+ ID + K GN+  A + + +L  + + P  V++ S+I+  CK G++ +A  L   
Sbjct: 250 VLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQ 309

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           ++     P A  Y T +  Y   G  +    LL+ +  +   P+ V++  ++  L K+ K
Sbjct: 310 MEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRK 369

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           + EA+ L E M      P+  TYN II   C    + +A+++L++M   +L P   T NI
Sbjct: 370 VDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNI 428

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           ++D LC    L+ A  +  S  +   +   V Y ++I     +G V +A   F +M++ G
Sbjct: 429 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 488

Query: 584 FEISIRDYT---KSFF 596
              +   YT   ++FF
Sbjct: 489 HNANPVVYTSLIRNFF 504



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 43/229 (18%), Positives = 83/229 (36%), Gaps = 15/229 (6%)

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           ++  L  +L+EM     G  +     +   L +  +L +AV  +  M  +   P    Y 
Sbjct: 124 DLAALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYT 183

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            +I +  + +   +A +LL QM     E     +  L+  L   G + +A  L+  ++  
Sbjct: 184 VLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGS 243

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT--------------- 592
            +    V Y   I      G+V  A  FF ++  +G +     YT               
Sbjct: 244 CLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEA 303

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           +  F  M +    P       M++ +   G     ++L   + + G +P
Sbjct: 304 EELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIP 352


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 252/510 (49%), Gaps = 13/510 (2%)

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
           AG +  A++    M + G+EP+ +  +       + + +  A + ++++ + G  P++VT
Sbjct: 131 AGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVT 190

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y  LI GYC +  VE+ ++L   M  +G   + ++Y  ++  +CK+ RI E + ++ +ME
Sbjct: 191 YNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKME 250

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
              L  D VTY+ LI  LCK     +A+Q   E   +    +   + AI+   C++  + 
Sbjct: 251 DTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMD 310

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +A+   + +    CI DVV Y  +I+G+ + G +G+A ++ +Q+ +    P+ V++ + +
Sbjct: 311 QAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFL 370

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G C+ G  ++AR ++   +     P+A+TY+  M+ +  EG +     +++EM  K   
Sbjct: 371 KGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFF 430

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           PT V   ++++ LC+  ++ EA + +E+   +G   + + + T+I  FC+  D+  A  L
Sbjct: 431 PTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSL 490

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           L+ M+L N  P + TY  +ID L   G ++ A  L + + +  I  T V Y T+I  +  
Sbjct: 491 LDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQ 550

Query: 566 EGDV-------------HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE 612
            G V              +  T F Q++EK       +        +L      D   C 
Sbjct: 551 IGRVEDLLNLLDKMLTRQECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCH 610

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           V++ ++ + G   S +++A  M    L+PD
Sbjct: 611 VLMESYLRKGIPLSAYKVACRMFSRSLIPD 640



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 228/525 (43%), Gaps = 38/525 (7%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+   +  I  L   + L+ A+ FL+        P+VV+ N ++  YC L   E A  L 
Sbjct: 152 NLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELI 211

Query: 122 CLMLKYGLHPDAFS-----------------------------------YNILIHGLCIA 146
             M   G  PD  S                                   YN LIH LC  
Sbjct: 212 SEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKH 271

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
              +EAL+F  +  + G + D + YS +   +    ++  A +++ ++  +G  PD+VTY
Sbjct: 272 QHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTY 331

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T +I G+ Q G V +  K+ + M   G K N ++Y+  L  +C+ G   EA  ++   E 
Sbjct: 332 TAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEE 391

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
               P+ +TYS+++ G  ++ K+  A  +  EM  K   P       +L  LC    + E
Sbjct: 392 QWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDE 451

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A+ + +  +   C  + V +  +I  + +  +I  A+ L   +      P  VT+ ++I 
Sbjct: 452 AKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIID 511

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
              K G++ +A  L   +   G++P+ VTY T ++ Y + G ++ LL LL +M T+    
Sbjct: 512 ALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQ--E 569

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
               +  VI+ LC    L+ A +LL  +       D  T + ++ S+ +      A+++ 
Sbjct: 570 CRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVA 629

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH-NIS 550
            +M+  +L P       +   L   G  + AD L +   E  NIS
Sbjct: 630 CRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERGNIS 674



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 206/431 (47%), Gaps = 5/431 (1%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYT 65
             M+  A+  + +M+ L +  ++ TYN L+    +L   +   +L  ++ +     +  +
Sbjct: 166 ANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVS 225

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
              V+  LC+  R+++ +  +++    +     V+ N ++   CK   A+ A        
Sbjct: 226 YYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQ 285

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K G   D   Y+ ++   C  G M++A E  N+M   G  PD +TY+ +  GF    ++ 
Sbjct: 286 KRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVG 345

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A K++Q++   G  P+ V+YT  + G CQ GN  E  ++ +    Q +  N I YSV++
Sbjct: 346 QARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVM 405

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
               + G++ +A  ++ EM   G  P  V  ++L++ LC+  +V +A +   E  +   +
Sbjct: 406 HGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCA 465

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
            N+     ++   C+++ I  A    D + +SN   D V Y  +ID   K G I EA +L
Sbjct: 466 VNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATEL 525

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++++K I P+ VT+ ++I+ + + G+V D   LLD  K+   +     +   +   C 
Sbjct: 526 TLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLD--KMLTRQECRTAFNQVIEKLCT 583

Query: 426 EGNIQRLLALL 436
            GN++    LL
Sbjct: 584 FGNLEAADKLL 594



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 219/475 (46%), Gaps = 20/475 (4%)

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           D I Y ++           GA +V++ ++ +G       +  ++  Y + G +   +++ 
Sbjct: 82  DPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVL 141

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
            +M   G + N++  +  +  +  +  +++AL  L  M+ +G+ P++VTY+ LI+G C  
Sbjct: 142 TMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDL 201

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            +V  A++L +EM  K  SP+  ++  ++  LC+   I E     + +  +  + D V Y
Sbjct: 202 HRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTY 261

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N +I    K  +  EA+Q  R+  ++      V +++++  +CK G++  A+ +++ +  
Sbjct: 262 NTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFT 321

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G  P  VTYT  +N + + G + +   +LQ+M      P  V+YT  +KGLC++    E
Sbjct: 322 RGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSE 381

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A ++++       TP+ ITY+ ++  F +   L  A  ++ +M      PT    N+L+ 
Sbjct: 382 AREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQ 441

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
            LC  G +  A   +        ++  V +TT+I   C + D+  A++    M       
Sbjct: 442 SLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMY------ 495

Query: 587 SIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                        LSN   PD      ++ A  + G +    EL   M+K G+ P
Sbjct: 496 -------------LSNKH-PDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDP 536



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 169/351 (48%)

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
           ++ + I Y V+L  + K+     A  +L  M   G++     +  ++    +  K+  A+
Sbjct: 79  YRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAM 138

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           Q+   M    I PN       +  L    M+ +A  + + + +   + +VV YN +I GY
Sbjct: 139 QVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGY 198

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
             L  + +A++L  ++  K  SP  V++ +++   CKN ++ +   +++ ++   L    
Sbjct: 199 CDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQ 258

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTY T ++  C+  +    L  L+E + +      V Y+ ++   CK+ ++ +A +++ +
Sbjct: 259 VTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNE 318

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M+  G  PD +TY  II  F +  ++ +A ++L QM+ H  +P + +Y   + GLC  G+
Sbjct: 319 MFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGN 378

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
              A  ++ + +E   +   + Y+ ++     EG +  A     +M+ KGF
Sbjct: 379 SSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGF 429


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 248/488 (50%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V   + VID   ++  +  A    +E   +   P +V+ ++++   CK      A+   
Sbjct: 222 DVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFL 281

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G+ PD ++YN LI+G    G  +EA+    +M RH + PD +T ++L       
Sbjct: 282 RQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKY 341

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  V   + +KG +PD+ +Y +++ GY   G + +   L ++ML  G   ++  +
Sbjct: 342 GKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTF 401

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           SVL+ +    G +D+A+ +  EM   G+KPD+VTY+ +I  LC+  K+  A++ +N+M  
Sbjct: 402 SVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMID 461

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + ++P+ +A+  ++ G C    + +A+     ++ +    D+V ++ +I+   KLG I +
Sbjct: 462 QGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMD 521

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  ++   +     P  V ++ L+ G+C  GK+  A R+ D +   G+EP+ V Y T +N
Sbjct: 522 AQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVN 581

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC+ G I   L+L +EM  K I P+ + Y ++I GL    +   A     +M   G+  
Sbjct: 582 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAI 641

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           ++ TYN ++R F K +   +A  L  ++   N++    T N +I G+     ++ A  L 
Sbjct: 642 NKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 701

Query: 542 VSLQEHNI 549
            S+    +
Sbjct: 702 ASISRSGL 709



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/568 (26%), Positives = 258/568 (45%), Gaps = 14/568 (2%)

Query: 27  LKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR-----NVYTNSIVIDGLCQQSR 78
           L+V I   N LL      + TD   D    I +  TP      +V++ SI++  LC Q +
Sbjct: 146 LRVDIIIANHLLKGFCEAKRTDEALD----ILLHRTPELGCVPDVFSYSILLKSLCDQGK 201

Query: 79  --LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSY 136
               D +L +    G    P VV+   ++  + K G    A  LF  M++ G+ PD  +Y
Sbjct: 202 SGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTY 261

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           + ++H LC A +M +A  F   M   GV PD  TY+ L  G+    Q   A +V +++  
Sbjct: 262 SSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 321

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
               PD+VT  +L+   C+ G ++E   + + M  +G   +V +Y ++L+     G + +
Sbjct: 322 HSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVD 381

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
              L   M   G+ PD+ T+S+LI+       + KA+ ++NEM    + P+   +  ++ 
Sbjct: 382 MTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIA 441

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
            LC    + +A   F+ +I      D   Y+ +I G+   G++ +A +L  +++   +  
Sbjct: 442 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRL 501

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            IV F+S+I   CK G++ DA+ + D     G  P AV Y+  M+ YC  G +++ L + 
Sbjct: 502 DIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVF 561

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
             M +  I P  V Y  ++ G CK  ++ E + L  +M   G+ P  I YN II      
Sbjct: 562 DAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVA 621

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
                A    ++M    +     TYNI++ G   N     A  L   L+  N+ +  +  
Sbjct: 622 GRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITL 681

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            T+I        V +A   F  +   G 
Sbjct: 682 NTMIAGMFQTRRVEEAKDLFASISRSGL 709



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/530 (26%), Positives = 237/530 (44%), Gaps = 66/530 (12%)

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
           G   + P + TY+IL        +   A     +LL  G   DI+    L+ G+C+    
Sbjct: 107 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRT 166

Query: 220 EEGLKLREVMLSQGFKL----NVIAYSVLLSSMC---KSGRIDEALGLLYEMEAVGLKPD 272
           +E L   +++L +  +L    +V +YS+LL S+C   KSG+ D+ L ++ E  AV   PD
Sbjct: 167 DEAL---DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV-CSPD 222

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +V Y+ +I    K+  V+KA  L+ EM  + I P+   + +++  LC+   + +A  +  
Sbjct: 223 VVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLR 282

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            ++    + D   YN +I GY   G   EAV++++++    I P +VT N L+   CK G
Sbjct: 283 QMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYG 342

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           K+ +AR + DT+ + G  P   +Y   +N Y  +G +  +  L   M    I P   T++
Sbjct: 343 KIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFS 402

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
           V+IK       L +A+ +  +M   GV PD +TY T+I + C+   +  A +  NQM   
Sbjct: 403 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQ 462

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK----------- 561
            + P    Y+ LI G C +G L  A  L++ +  + + L  V +++II            
Sbjct: 463 GVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDA 522

Query: 562 ------------------------AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
                                    +C  G + KA+  F  MV  G E ++  Y      
Sbjct: 523 QNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGT---- 578

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             L NG+      C++        G +     L   M++ G+ P   L N
Sbjct: 579 --LVNGY------CKI--------GRIDEGLSLFREMLQKGIKPSTILYN 612



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/550 (22%), Positives = 252/550 (45%), Gaps = 10/550 (1%)

Query: 57  SETPR----NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
           ++ PR      +T +I++D   +  R + A+ F  +         ++  N ++  +C+  
Sbjct: 105 AQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAK 164

Query: 113 FAEVAKG-LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV--EPDAI 169
             + A   L     + G  PD FSY+IL+  LC  G   +A +    M   G    PD +
Sbjct: 165 RTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVV 224

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
            Y+ +   F     ++ A  + ++++ +G  PD+VTY+ ++   C+   + +       M
Sbjct: 225 AYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQM 284

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           +++G   +   Y+ L+     +G+  EA+ +  EM    + PD+VT ++L+  LCK  K+
Sbjct: 285 VNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKI 344

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A  +++ M  K  +P+ F++  +L G   K  + +    FD ++      D+  ++++
Sbjct: 345 KEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVL 404

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           I  Y   G + +A+ ++ ++ +  + P +VT+ ++I   C+ GK+ DA    + +   G+
Sbjct: 405 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 464

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P    Y   +  +C  G++ +   L+ E+    +    V ++ +I  LCK  ++ +A  
Sbjct: 465 APDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQN 524

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           + +    +G  PD + Y+ ++  +C    + KA ++ + M    +EP    Y  L++G C
Sbjct: 525 IFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYC 584

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             G +     L   + +  I  + + Y  II      G    A   F +M E G  I+  
Sbjct: 585 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKC 644

Query: 590 DYT---KSFF 596
            Y    + FF
Sbjct: 645 TYNIVLRGFF 654



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 208/417 (49%), Gaps = 3/417 (0%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSE 58
           L + YS TG   +AV V  +M+   +   + T N L+ +L ++  I    D++D + +  
Sbjct: 299 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKG 358

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +V++  I+++G   +  L D         G    P + + + ++  Y   G  + A 
Sbjct: 359 QNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAM 418

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M  +G+ PD  +Y  +I  LC  G M++A+E  N M   GV PD   Y  L +GF
Sbjct: 419 IIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 478

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +  A ++I +++  G   DIV ++ +I   C++G + +   + ++ ++ G   + 
Sbjct: 479 CTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDA 538

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + YS+L+   C  G++++AL +   M + G++P++V Y  L+ G CK  ++ + + L+ E
Sbjct: 539 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFRE 598

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  K I P++  +  I+ GL        A++ F  +  S    +   YNI++ G+ K   
Sbjct: 599 MLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRC 658

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
             EA+ L+++L    +   I+T N++I G  +  +V +A+ L  +I   GL P  VT
Sbjct: 659 FDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 150/534 (28%), Positives = 259/534 (48%), Gaps = 11/534 (2%)

Query: 56  VSETPRNVYTNSIVIDGLCQQSRLQDAIL---FLQETAGKEFG--PSVVSLNAIMSRYCK 110
           V    R + T+++V    C    L+DA L     Q  +   FG   SV + NA++  + +
Sbjct: 16  VGRLRREISTDAVVKIFQC----LKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFAR 71

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR-HGVEPDAI 169
                 A  L    L     PD  ++N+LI G C+A   EEA     +M   +GV P   
Sbjct: 72  TKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLK 131

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           T++++  G     ++  A    +     G   DI TYT ++    +   +++ + L E +
Sbjct: 132 THNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKI 191

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
            + G    +  Y+ LL+ +CK GR++EA+ LL ++   G  PD+VTY+ LI GL K+ + 
Sbjct: 192 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRS 251

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A +L+ EM  + +  ++  + A++ GL +   I +A   + ++    C+ DVV  + M
Sbjct: 252 FEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 311

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           IDG  K G IG AV++++ +  + ++P+ V +++LI+G CK  K+  A  +L  +K    
Sbjct: 312 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 371

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P  +TY   ++  C+ G+++   A   EM      P   TY +++ G CK      A  
Sbjct: 372 TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACG 431

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           + +DM     +P+ +TY T+I   CK + L KA      M      P S  Y+ L+DGLC
Sbjct: 432 VFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLC 491

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +G L+   C+L    E +        T +I   C    V +A++ F  + ++G
Sbjct: 492 KSGKLEGG-CMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG 544



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 249/498 (50%), Gaps = 12/498 (2%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL--YNLRHTD-----IMWDLYDDIKVS 57
           V++RT    +A  ++           ++T+N L+  Y L         ++ ++ +D  V+
Sbjct: 68  VFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVA 127

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            +   + T+++V+ GLC+  ++  A+   + T        + +  AI+    K    + A
Sbjct: 128 PS---LKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDA 184

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   +   G  P   +YN L++GLC  G +EEA++    +  +G  PD +TY+ L  G
Sbjct: 185 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 244

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                +   A+K+ +++ ++G   D V YT LI G  Q G + +   + + M SQG   +
Sbjct: 245 LGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPD 304

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V+  S ++  +CK+GRI  A+ +   MEA GL P+ V YS LI GLCK  K+  A+++  
Sbjct: 305 VVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 364

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M     +P++  +  ++ GLC+   +  AR +FD ++ + C  DV  YNI++ G+ K G
Sbjct: 365 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAG 424

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N   A  ++  +     SP++VT+ +LI G CK  ++  A      +K  G  P +  Y+
Sbjct: 425 NTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYS 484

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           + ++  C+ G ++    L  EME   +  +  T T +I  LCK  ++ EAV L   +   
Sbjct: 485 SLVDGLCKSGKLEGGCMLFDEMERSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNAIRKE 543

Query: 478 GVTPDQITYNTIIRSFCK 495
           G+ P    YN+II +  K
Sbjct: 544 GM-PHPYAYNSIISTLIK 560



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 214/457 (46%), Gaps = 41/457 (8%)

Query: 13  HDAVFVIAKMKE-LDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR---NVYTNSI 68
            +A  VI +M+E   +  S++T+N +L+ L  +  +    D  + + T     +++T + 
Sbjct: 111 EEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTA 170

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++D L +  ++QDA+  +++       P++ + NA+++  CK+G  E A  L   ++  G
Sbjct: 171 IVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 230

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  +Y  LI GL       EA +   +M   G+  D + Y+ L +G     +I  A 
Sbjct: 231 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQAS 290

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN----------- 237
            V + +  +G  PD+VT + +I G C+ G +   +++ + M ++G   N           
Sbjct: 291 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 350

Query: 238 ------------------------VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
                                    I Y++L+  +CKSG ++ A     EM   G KPD+
Sbjct: 351 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDV 410

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            TY+IL+ G CK      A  ++++M S   SPN   +G ++ GLC++  +T+A +YF  
Sbjct: 411 YTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQH 470

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +    C  D  +Y+ ++DG  K G +     L+ ++    ++ S  T   LI+  CK  +
Sbjct: 471 MKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANS-QTRTRLIFHLCKANR 529

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           V +A  L + I+  G+ P    Y + ++   +   + 
Sbjct: 530 VDEAVSLFNAIRKEGM-PHPYAYNSIISTLIKSAKVN 565



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 202/458 (44%), Gaps = 51/458 (11%)

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           GF+ +V   + LL    ++ R  EA  LL    A    PD+ T+++LI G C   +  +A
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 293 IQLYNEMCSK-RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
             +  EM     ++P+   H  +L GLC+   +  A  +F++   + C  D+  Y  ++D
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
              K   I +AV L  ++     +P+I T+N+L+ G CK G++ +A  LL  I  +G  P
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233

Query: 412 SAVTYTTFMNAYCEE-----------------------------------GNIQRLLALL 436
             VTYT+ ++   +E                                   G I +  ++ 
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           + M ++   P  VT + +I GLCK  ++  AV++ + M   G+ P+++ Y+ +I   CK 
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 353

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
           + +  A ++L QM      P + TYNILIDGLC +GD++ A      + E         Y
Sbjct: 354 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 413

Query: 557 TTIIKAHCAEGDVHKAMTFFCQM---------VEKGFEIS----IRDYTKS--FFCMMLS 601
             ++   C  G+   A   F  M         V  G  IS     R  TK+  +F  M  
Sbjct: 414 NILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKE 473

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
            G PPD  +   ++    + G L     L   M +SG+
Sbjct: 474 RGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 511



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 189/400 (47%), Gaps = 13/400 (3%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSET 59
           ++   + DAV ++ K+       +I TYN+LL  L          D++  + D+     T
Sbjct: 176 AKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN---GCT 232

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P +V T + +IDGL ++ R  +A    +E A +      V   A++    + G    A  
Sbjct: 233 P-DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASS 291

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           ++  M   G  PD  + + +I GLC AG +  A+     M   G+ P+ + YS L  G  
Sbjct: 292 VYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 351

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A +++ ++      PD +TY +LI G C+ G+VE      + ML  G K +V 
Sbjct: 352 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 411

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y++L+S  CK+G  D A G+  +M +    P++VTY  LI GLCK+ ++ KA   +  M
Sbjct: 412 TYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHM 471

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             +   P+SF + +++ GLC+   +    M FD +  S  + +      +I    K   +
Sbjct: 472 KERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRV 530

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
            EAV L+   I K   P    +NS+I    K+ KV    R
Sbjct: 531 DEAVSLF-NAIRKEGMPHPYAYNSIISTLIKSAKVNPCTR 569



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 178/401 (44%), Gaps = 20/401 (4%)

Query: 266 AVG-LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH--GAILLGLCEKE 322
           AVG L+ ++ T +++    C +D    A +L+  + S R       H   A+L      +
Sbjct: 15  AVGRLRREISTDAVVKIFQCLKD-ADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTK 73

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTF 381
              EA     + + +  + DV  +N++I GY       EA  + R++ E   ++PS+ T 
Sbjct: 74  RHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTH 133

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N +++G CK+GKV  A    +T   +G      TYT  ++   +   IQ  +AL++++  
Sbjct: 134 NLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITA 193

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
               PT  TY  ++ GLCK  +L+EA+ LL  +   G TPD +TY ++I    K K   +
Sbjct: 194 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE 253

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A++L  +M L  L   +  Y  LI GL   G +  A  +  ++         V  +T+I 
Sbjct: 254 AYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMID 313

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------KSFFCMM-----LSNGF-PP 606
             C  G +  A+  F  M  +G   +   Y+         +   C +     +   F  P
Sbjct: 314 GLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 373

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           D     +++    + GD+ +       M+++G  PD +  N
Sbjct: 374 DTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYN 414


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 167/638 (26%), Positives = 295/638 (46%), Gaps = 44/638 (6%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R  MV DAV     M       S+ T N +L +L   R  D+ W  + ++  +    NV 
Sbjct: 121 RENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVA 180

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I+++ LC++ + + A + L++       P+ V+ N +++ YCK G  + A  L   M
Sbjct: 181 TFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAM 240

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G+  D  +YN+LI  LC      +       M ++ V P+ ITY+ L  G     +I
Sbjct: 241 ASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKI 300

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A KV +++ +    P+ VTY  LI G+C  GN+EE L+L +VM+S G + N + Y  L
Sbjct: 301 GVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGAL 360

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L+ + K  +      +L  M   G++   ++Y+ +I GLCK   + +A+QL ++M    +
Sbjct: 361 LNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSV 420

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SP+      ++ G                 + +  + + VL++ +I  Y K+GN+ EA+ 
Sbjct: 421 SPDIVTFSVLVNG----------------FLKTGLVPNRVLHSTLIYNYCKMGNLKEALN 464

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
            Y  + +        T + L+  FC+ G++ +A   +D +   GL PS+VT+   ++ Y 
Sbjct: 465 AYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYG 524

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             G+  +  ++  +M +    P+  TY  ++KGL     + EA   +     I       
Sbjct: 525 NSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGST 584

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS- 543
            YNT++    +  +L  A  LL++M ++N  P S TY  LI GLC  G +  A  LL+S 
Sbjct: 585 FYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPA--LLLSG 642

Query: 544 --LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
             +++  +S     YT+++     EG    A+  F  M+ +G +                
Sbjct: 643 RAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQ---------------- 686

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
               PD     V+L  + + G +  V ++ + M    L
Sbjct: 687 ----PDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSL 720



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 252/541 (46%), Gaps = 36/541 (6%)

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            +T+S+++   C+  RL++A  F+   +     PS V+ + I+  Y   G A  A  +F  
Sbjct: 479  FTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDK 538

Query: 124  MLKYGLHPDAFSY-----------------------------------NILIHGLCIAGS 148
            M   G  P  F+Y                                   N ++     +G+
Sbjct: 539  MNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGN 598

Query: 149  MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTYT 207
            +  A+   ++M  +   PD+ TY+ L  G     ++  A  +  + + KG   P+   YT
Sbjct: 599  LSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYT 658

Query: 208  VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
             L+ G  + G+ +  L + E ML++G + + IA++VLL    + G++ +   +L  M + 
Sbjct: 659  SLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSR 718

Query: 268  GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
             L  +L TY+IL+ G  K+  + +  +LYNEM     +P+     +++LG C+   +  A
Sbjct: 719  SLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVA 778

Query: 328  RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              +   + +     D    N+++    +   I  A  L +QL    ++P++ T+NSL  G
Sbjct: 779  VKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNG 838

Query: 388  FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            F +     +AR +L  +  +G  P+   +TT +   C  GN++  + L  EM+   +   
Sbjct: 839  FVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQ 898

Query: 448  HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             V  + +I+GL +  K  EA ++L  M  + + P   T+ T++ ++CK  ++ KA +L +
Sbjct: 899  GVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRS 958

Query: 508  QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
             M   +++   A YN+LI GLC +GD++ A  L   +++ +I      Y  +I +    G
Sbjct: 959  VMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTG 1018

Query: 568  D 568
            +
Sbjct: 1019 N 1019



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 227/497 (45%), Gaps = 34/497 (6%)

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           + +  A +  + +  +G  P + T  +++    +   V+      + M++     NV  +
Sbjct: 123 NMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVATF 182

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++LL+++C+ G+   A  LL +M+  G  P  VTY+ L+   CK+ +   A +L + M S
Sbjct: 183 NILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMAS 242

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K I+ +   +  ++  LC K    +  +    +  +    + + YN +I+G VK G IG 
Sbjct: 243 KGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGV 302

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +++ ++    + P+ VT+N+LI+G C NG + +A RL D +  HGL P+ VTY   +N
Sbjct: 303 ATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLN 362

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
              +      + ++L+ M    +   H++YT +I GLCK   L+EAVQLL+DM  + V+P
Sbjct: 363 GISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSP 422

Query: 482 DQITY-------------------NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           D +T+                   +T+I ++CK  +L++A      M          T +
Sbjct: 423 DIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSS 482

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           +L+   C  G L+ A+  +  +    ++ + V +  II  +   GD  KA + F +M   
Sbjct: 483 VLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSL 542

Query: 583 GFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           G   S   Y                K F     S  +         ML    + G+L + 
Sbjct: 543 GHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNA 602

Query: 628 FELAAVMIKSGLLPDKF 644
             L   M+ +  +PD F
Sbjct: 603 VALLDEMVMNNFVPDSF 619



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 200/444 (45%), Gaps = 7/444 (1%)

Query: 7    SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMWDLYDDIKVSE----TPR 61
            SR+G + +AV ++ +M   +      TY SL+  L R   ++  L    +  E    +P 
Sbjct: 594  SRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPN 653

Query: 62   NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
                 S+V DGL ++   + A+   ++   +   P  ++ N ++ RY + G       + 
Sbjct: 654  PAMYTSLV-DGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDIL 712

Query: 122  CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              M    L  +  +YNIL+HG      M    +  N+M  HG  PD +T+  L  G+   
Sbjct: 713  STMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKS 772

Query: 182  SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
              +  A K ++K+ ++G   D  T  VL+   C+   ++    L + +   G   NV  Y
Sbjct: 773  GSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTY 832

Query: 242  SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            + L +   ++   DEA  +L+ +   G  P    ++ LIRG+C+   V  A++L +EM  
Sbjct: 833  NSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKI 892

Query: 302  KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
              +S    A  AI+ GL       EA      ++    I  V  +  ++  Y K GN+ +
Sbjct: 893  LGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAK 952

Query: 362  AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            A++L   + +  +   +  +N LI G C +G +  A +L + ++   + P+   Y   ++
Sbjct: 953  ALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLID 1012

Query: 422  AYCEEGN-IQRLLALLQEMETKAI 444
            ++   GN I     LL+++ T+ +
Sbjct: 1013 SFLCTGNYIVESEKLLRDLRTREL 1036


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 160/581 (27%), Positives = 269/581 (46%), Gaps = 46/581 (7%)

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           C+   + DA+            PS+V    I+    K+ +   A  L+ LM   G+ P  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
            ++NILI+  C  G M+ A      + + G  P+ +T++ L KGF +  ++  A  +  +
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 194 LLIKGSDPDIVTYTVLICGYC--QIGNVEEGLKLREVMLS-QGFKLNVIAYSVLLSSMCK 250
           ++ +    D V Y  LI G C  +IG     ++L + M   Q  K N+I Y+ ++  +CK
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G I+EA  L  +M   G+ PD+ TYS LI GLC+  +  +   L N             
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLN------------- 256

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
                 G C    + EAR  F+ +I      D++ YNI+++GY     +GEA +L+  ++
Sbjct: 257 ------GFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMV 310

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           E+   P  +T+  L++G+C   KV +AR L   +   GL P   +Y   +  YC+   + 
Sbjct: 311 ERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVG 370

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM-YVIGVTPDQITYNTI 489
             + LL++M  K + P  +TY  V+ GLCK   + +A +L+++M Y     PD  TYN +
Sbjct: 371 EAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNIL 430

Query: 490 IRSFCKCKDLRKAFQLLNQM-WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           + S C+ + + KA      + +  +  P   +YNILI G C N  L  A  L   +   N
Sbjct: 431 LESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKN 490

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ 608
           +    V Y  ++ A      + KA+    Q+V++G   ++R Y       +L NG     
Sbjct: 491 LVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYN------ILING----- 539

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD--KFLIN 647
                     H+GG   +  +++  +   G  PD   ++IN
Sbjct: 540 ---------LHKGGRPKTAQKISLYLSIRGYHPDVKTYIIN 571



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 251/500 (50%), Gaps = 33/500 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           +   G +  A  V+ K+ +   + ++ T+ +L+      D M D   +YD++       +
Sbjct: 99  FCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFD 158

Query: 63  VYTNSIVIDGLCQQS--RLQDAILFLQETAGKEF-GPSVVSLNAIMSRYCKLGFAEVAKG 119
                 +I+GLC+    + + A+  LQ+   ++   P+++  N ++   CK G    A+ 
Sbjct: 159 DVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARV 218

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M+  G+ PD F+Y+ LI+GLC AG  +E     N                   GF 
Sbjct: 219 LCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLN-------------------GFC 259

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           L +++  A ++   ++ +G   DI+ Y +L+ GYC    V E  KL  +M+ +G + + I
Sbjct: 260 LNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTI 319

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y++L+   C   ++DEA  L + M   GL PD+ +Y+ILI+G CK ++V +A+ L  +M
Sbjct: 320 TYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDM 379

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ---DVVLYNIMIDGYVKL 356
             K + PN   + +++ GLC+   I +A    D   M  C Q   DV  YNI+++   ++
Sbjct: 380 FLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDE--MHYCCQPPPDVTTYNILLESLCRI 437

Query: 357 GNIGEAVQLYRQLI-EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
             + +A+  ++ LI E+  +P++ ++N LI G CKN ++ +A  L + +    L P  VT
Sbjct: 438 ECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVT 497

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y   ++A      + + +ALL ++  + I P   TY ++I GL K  + + A ++   + 
Sbjct: 498 YNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLS 557

Query: 476 VIGVTPDQITYNTIIRSFCK 495
           + G  PD  TY  II   CK
Sbjct: 558 IRGYHPDVKTY--IINELCK 575



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 173/389 (44%), Gaps = 19/389 (4%)

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           LKL  +++    ++++ +  +   S CK   ID+A+ L + M  +   P +V ++ ++  
Sbjct: 4   LKLPRLLMPYVRRIHLHSQPLPSQSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGT 63

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           + K      AI LY  M  K + P +     ++   C    +  A      ++   C  +
Sbjct: 64  IAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPN 123

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN--GKVADARRL 400
           VV +  ++ G+     + +A+ +Y +++ +RI    V + +LI G CK+  GK   A +L
Sbjct: 124 VVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQL 183

Query: 401 LDTIKLHGL-EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L  ++   L +P+ + Y T ++  C++GNI     L  +M  + I P   TY+ +I GLC
Sbjct: 184 LQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLC 243

Query: 460 KQW----------------KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           +                  K+ EA +L   M   G   D I YN ++  +C    + +A 
Sbjct: 244 RAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEAR 303

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           +L + M     +P + TY IL+ G C+   +  A  L   + E  +     +Y  +IK +
Sbjct: 304 KLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGY 363

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           C    V +AM     M  K    +I  Y 
Sbjct: 364 CKFERVGEAMNLLEDMFLKNLVPNIITYN 392


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 248/524 (47%), Gaps = 11/524 (2%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQE--TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +T + V+D L +  R+++A+    E    GK+   SVV    +M  YC       A  +F
Sbjct: 248 FTFNSVVDVLVKGGRMEEALHIKDELLATGKKM--SVVLATTLMHGYCLQREVRKALDIF 305

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              L+ GL P   +Y +LI G    G  E+A E    M  HG+ P    ++++ KG  LL
Sbjct: 306 EETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKG--LL 363

Query: 182 SQISGAWKVIQKLLIKGSD---PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
           +     WK    L  + +D   PD  TY +LI   CQ   + E L L E M   G K  +
Sbjct: 364 ND--KLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYI 421

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y  LL   C +G +DEA+ L  EM   G  P++VTY+ L++G   +    KA  L  E
Sbjct: 422 VTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAE 481

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M    +S N + +  ++ GLC    + E             +   + YN +I+G++K G 
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGM 541

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +G A  +Y+Q+  K I P+IVT+ S I G+CK      A ++L+ ++  GL P    Y +
Sbjct: 542 MGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNS 601

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +  +C+EGN+   L +L  M    + P    Y   I G      ++EA++  E M   G
Sbjct: 602 LIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEG 661

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           +  D  TY T+I  F K  ++  A +L ++M      P   T+  L  GLC NGD+ +A 
Sbjct: 662 IDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDAR 721

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            LL  +   +I    + Y  +I  +   G + +A     +M+E+
Sbjct: 722 KLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLER 765



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 255/525 (48%), Gaps = 6/525 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDD-IKVSETP 60
           V  + G + +A+ +  ++     K+S+    +L++     R      D++++ ++    P
Sbjct: 256 VLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVP 315

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            +V T +++I G  ++   + A    ++       PS    N ++         + A  L
Sbjct: 316 TDV-TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL 374

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M   G+ PDAF+YNILIH LC    + EAL     M   GV+P  +TY  L   + +
Sbjct: 375 FKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCV 433

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A K+  ++  KG  P++VTYT L+ G+      ++   L   M   G   N   
Sbjct: 434 NGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYT 493

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L++ +C  GR+ E   +L   E  G  P  +TY+ +I G  K   +  A  +Y +MC
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC 553

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +K I PN   + + + G C+      A    + +       D+  YN +I G+ + GN+ 
Sbjct: 554 AKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMS 613

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A+Q+   +++  + P+I  +NS I G+     + +A R  + +   G++    TYTT +
Sbjct: 614 HALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLI 673

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + + ++GN+   L L  EM  K   P H+T+T +  GLC+   + +A +LL++M  + + 
Sbjct: 674 DGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIR 733

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           P+ + YN +I  + +   L++AF+L ++M    + P   TY+IL+
Sbjct: 734 PNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 244/524 (46%), Gaps = 1/524 (0%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P + +   +V+    ++    DA+    E    E  P     +  ++  CKL  A  A  
Sbjct: 174 PLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALL 233

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   M   G  P  F++N ++  L   G MEEAL   +++   G +   +  + L  G+ 
Sbjct: 234 VLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYC 293

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           L  ++  A  + ++ L  G  P  VTYTVLI G  + G  E+  +L   M   G   +  
Sbjct: 294 LQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            +++++  +       +A+ L  EM   G+ PD  TY+ILI  LC++ K+ +A+ L+ +M
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKM 412

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               + P    + ++LL  C    + EA   +  +       +VV Y  ++ G++     
Sbjct: 413 NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A  L  ++ +  +S +  T+N+LI G C  G+V +   +L   +  G  P+A+TY + 
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSI 532

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N + + G +    A+ Q+M  K I P  VTYT  I G CK      A+++L D+   G+
Sbjct: 533 INGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGL 592

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD   YN++I  FC+  ++  A Q+L  M    L P  + YN  I G      ++ A  
Sbjct: 593 RPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALR 652

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
               + +  I L    YTT+I     +G+V  A+  + +MV KG
Sbjct: 653 FYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKG 696



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 243/529 (45%), Gaps = 17/529 (3%)

Query: 130 HP-DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           HP DA+ +++++      G  ++A+   ++M    +EPD    S+       L   + A 
Sbjct: 173 HPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRAL 232

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            V++K+   G  P   T+  ++    + G +EE L +++ +L+ G K++V+  + L+   
Sbjct: 233 LVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGY 292

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C    + +AL +  E    GL P  VTY++LIRG  ++    KA +L  +M    + P++
Sbjct: 293 CLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPST 352

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
                ++ GL   ++  +A   F  +  S  I D   YNI+I    +   I EA+ L+ +
Sbjct: 353 NEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEK 411

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + E  + P IVT++SL+  +C NG + +A +L   +   G  P+ VTYTT M  +  +  
Sbjct: 412 MNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAA 471

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
             +  ALL EM+   +     TY  +I GLC   ++ E  ++L+     G  P  +TYN+
Sbjct: 472 FDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNS 531

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           II  F K   +  AF +  QM    + P   TY   IDG C       A  +L  ++   
Sbjct: 532 IINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG 591

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--------------- 593
           +     AY ++I   C EG++  A+     M++ G   +I  Y                 
Sbjct: 592 LRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEAL 651

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            F+  M+  G   D      ++  F + G++    +L + M+  G +PD
Sbjct: 652 RFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPD 700



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 187/425 (44%), Gaps = 51/425 (12%)

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           MEA G+ PD  + + L+    +      A+ L  EM  K    +++    ++    ++ M
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
             +A   FD +  S    D  + ++ I    KL +   A+ + R++ +    P   TFNS
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           ++    K G++ +A  + D +   G + S V  TT M+ YC +  +++ L + +E     
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 444 IGPTHVTYTVVIKG------------LCKQ-------------------------WKLQE 466
           + PT VTYTV+I+G            LC+Q                         WK  +
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWK--D 370

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           AV L ++M   G+ PD  TYN +I   C+ + +R+A  L  +M    ++P   TY+ L+ 
Sbjct: 371 AVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLL 429

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
             CVNG +  A  L   +     +   V YTT++K H  +    KA     +M + G  +
Sbjct: 430 CYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNG--V 487

Query: 587 SIRDYTKSFFCMMLSNGFPPDQEICEV--MLIAFHQGGDLGSVFELAAVM---IKSGLLP 641
           S  DYT +     L NG      +CEV  ML  F   G + +     +++   IK+G++ 
Sbjct: 488 SCNDYTYN----TLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543

Query: 642 DKFLI 646
             F +
Sbjct: 544 SAFAV 548


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 233/473 (49%), Gaps = 1/473 (0%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  MLK G  P+  +YN LI+  C    + +A      M   G+ PD  TY+ L  G   
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 181 LSQISGAWKVIQKLLIK-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++ A  +  ++  + G+  D  +YT+LI G C  G +++  ++   M     +  V 
Sbjct: 138 AGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVH 197

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+VLL  +CK  R+ EA  LL EM   G+ P++VTY+ LI GLC++ +     +L  +M
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             +R SP+ + +  ++ GLC+   +          I      +V+ YN +I+GY K G++
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDM 317

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A+ + + +   R++P + TFN +I+GFC  GKV  A   L  +   GL P+ VT+ + 
Sbjct: 318 KAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSL 377

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C  G  +  L LL  ME   + P   TY + I  LC + +L+EA  L   + + G+
Sbjct: 378 ISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGI 437

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
               + Y +++  +C+  D+  AF L+ +M   N  P   TYN LIDGLC    L  A  
Sbjct: 438 KAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAID 497

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           LL  +++  I  T   +  +IK    +     A   + QM+  G +   + YT
Sbjct: 498 LLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYT 550



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 148/483 (30%), Positives = 231/483 (47%), Gaps = 38/483 (7%)

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           S  P N  T + +I+  C+ + L DA   L         P   + N +M   C+ G    
Sbjct: 84  SGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAA 143

Query: 117 AKGLFCLM-LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
           A GLF  M  ++G   D +SY ILI GLC AG +++A      M R    P   TY++L 
Sbjct: 144 ACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLL 203

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            G   + ++  A  ++ +++ KG  P++VTY  LI G CQ G  ++  KL E M  Q   
Sbjct: 204 DGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHS 263

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +   Y+ ++  +CK G++     +L+E    G+  +++TY+ LI G CK   +  A+ +
Sbjct: 264 PDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDV 323

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
              M   R++P                                    V  +N +I G+  
Sbjct: 324 LQLMKRNRVNPG-----------------------------------VQTFNEVIHGFCC 348

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G + +A+    Q+    +SP+ VTFNSLI G C  G+   A RLLD ++ +G+ P   T
Sbjct: 349 GGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQT 408

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y  F++A C+EG ++   +L   +  K I   +V YT ++ G C+   +  A  L+E M 
Sbjct: 409 YAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMA 468

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
                PD  TYNT+I   CK K L +A  LL++M    +EPT+ T+NILI  +    D K
Sbjct: 469 SENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLW--DKK 526

Query: 536 NAD 538
           +AD
Sbjct: 527 HAD 529



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 163/689 (23%), Positives = 292/689 (42%), Gaps = 80/689 (11%)

Query: 21  KMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR------NVYTNSIVIDGLC 74
           +M+E  L     TYN L+  L    ++          + PR      + Y+ +I+I GLC
Sbjct: 115 RMREAGLAPDTFTYNCLMLGLCRAGLLAAACG--LFVQMPRRWGACYDRYSYTILIKGLC 172

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
              R+ DA     + +     P V +   ++   CK+     A+ L   M+  G+ P+  
Sbjct: 173 AAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVV 232

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +YN LI GLC  G  ++  +    M      PD  TY+ +  G     ++    KV+ + 
Sbjct: 233 TYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEA 292

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           + KG   +++TY  LI GYC+ G+++  L + ++M        V  ++ ++   C  G++
Sbjct: 293 IGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKV 352

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            +A+  L +M   GL P+ VT++ LI G C   +   A++L + M    + P+   +   
Sbjct: 353 HKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIF 412

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           +  LC++  + EA   F  L M       V+Y  ++ GY ++G+I  A  L  ++  +  
Sbjct: 413 IDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENC 472

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P + T+N+LI G CK  ++  A  LLD +K  G+EP+  T+   +     +        
Sbjct: 473 MPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAK 532

Query: 435 LLQEMETKAIGPTHVTYTVVI-----KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           + ++M +    P   TYT+ I     +G  K+  +  AV    +M+  GV PD  TYN I
Sbjct: 533 MYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV---EMHEAGVFPDVETYNAI 589

Query: 490 IRSFC-------------------------------------------------KCKDLR 500
           I+++                                                  K  D+R
Sbjct: 590 IKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVR 649

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
              +L  QM   +  P  +TY  L+ GLC    L+  + LL+ +Q ++I L +     ++
Sbjct: 650 NLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLL 709

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRD---------------YTKSFFCMMLSNGFP 605
             +C      +A   F  M  + F+  ++                   S F  ML  G+ 
Sbjct: 710 GCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYN 769

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVM 634
            D+ + ++++   H+ G  G+  E+ +VM
Sbjct: 770 YDEVVWKLLIDCLHEKGHAGACLEMLSVM 798



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 260/548 (47%), Gaps = 33/548 (6%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNS 67
           V +A  ++ +M    +  ++ TYN+L+  L    R  D+   L + +++     + +T +
Sbjct: 212 VGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVT-KLLEKMEIQRHSPDCWTYT 270

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
            V+ GLC+  ++      L E  GK     V++ NA+++ YCK G  + A  +  LM + 
Sbjct: 271 QVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRN 330

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            ++P   ++N +IHG C  G + +A+ F   M   G+ P+ +T++ L  G   + +   A
Sbjct: 331 RVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIA 390

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            +++  +   G  PD  TY + I   C  G +EE   L   +  +G K + + Y+ L+  
Sbjct: 391 LRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHG 450

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            C+ G ID A GL+ +M +    PD+ TY+ LI GLCK  ++ +AI L ++M  + I P 
Sbjct: 451 YCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPT 510

Query: 308 SFAHGAILLG-LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI-----DGYVKLGNIGE 361
           +     ++   L +K+    A+MY + +I S C  D   Y + I     +G  K  NI  
Sbjct: 511 TCTFNILIKQMLWDKKHADAAKMY-EQMISSGCKPDKQTYTLKISTDWFEGATKEENIDM 569

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG--LEPSAVTYTTF 419
           AV    ++ E  + P + T+N++I  +   G    A      +K+    ++P   TY+  
Sbjct: 570 AVV---EMHEAGVFPDVETYNAIIKAYVDAGLKEKA--FFAHVKMLSVPIDPDCTTYSIL 624

Query: 420 MNAYCEEG--------------NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           +N  C +               +++ L  L ++M      P   TY  +++GLC Q +L+
Sbjct: 625 LNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLE 684

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           E   LL  M    +  D+   + ++  +C  +  R+A +    M   + +P   +  +L+
Sbjct: 685 EVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLL 744

Query: 526 DGLCVNGD 533
            GLC +GD
Sbjct: 745 SGLCDSGD 752



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 182/426 (42%), Gaps = 19/426 (4%)

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +IAYS   S   ++ R+   L     M   G  P+  TY+ LI   CK   +  A     
Sbjct: 58  LIAYS---SRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALV 114

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS-NCIQDVVLYNIMIDGYVKL 356
            M    ++P++F +  ++LGLC   ++  A   F  +        D   Y I+I G    
Sbjct: 115 RMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAA 174

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G I +A +++ ++      P + T+  L+ G CK  +V +A  LL  +   G+ P+ VTY
Sbjct: 175 GRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTY 234

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              +   C+EG    +  LL++ME +   P   TYT V+ GLCK  K+    ++L +   
Sbjct: 235 NALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIG 294

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            GV  + +TYN +I  +CK  D++ A  +L  M  + + P   T+N +I G C  G +  
Sbjct: 295 KGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHK 354

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY----- 591
           A   L  +    +S   V + ++I   C+ G+   A+     M E G     + Y     
Sbjct: 355 AMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFID 414

Query: 592 ----------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                       S F  +   G      I   ++  + Q GD+ S F L   M     +P
Sbjct: 415 ALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMP 474

Query: 642 DKFLIN 647
           D    N
Sbjct: 475 DVHTYN 480



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 208/466 (44%), Gaps = 19/466 (4%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTN 66
           G VH A+  + +M    L  +  T+NSL+    ++    I   L D ++      +  T 
Sbjct: 350 GKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTY 409

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I ID LC + +L++A         K      V   +++  YC++G  + A GL   M  
Sbjct: 410 AIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMAS 469

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
               PD  +YN LI GLC    ++ A++  + M + G+EP   T++IL K      + + 
Sbjct: 470 ENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHAD 529

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLIC-GYCQIGNVEEGLKLREV-MLSQGFKLNVIAYSVL 244
           A K+ ++++  G  PD  TYT+ I   + +    EE + +  V M   G   +V  Y+ +
Sbjct: 530 AAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAI 589

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD--------KVHKAI--- 293
           + +   +G  ++A     +M +V + PD  TYSIL+  +C +D        K+ K +   
Sbjct: 590 IKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVR 649

Query: 294 ---QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
              +L+ +MC    +P    + A+L GLC +  + E       +  ++ + D  + + ++
Sbjct: 650 NLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLL 709

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
             Y  L    EA + +R +  +   P + +   L+ G C +G    A  +   +   G  
Sbjct: 710 GCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYN 769

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
              V +   ++   E+G+    L +L  M+ K    +  TY  +++
Sbjct: 770 YDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLVR 815



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 85/220 (38%), Gaps = 10/220 (4%)

Query: 409 LEPSAV-TYTTFMNAYCEEGN----IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           L+PS V ++   + AY   G+    +  LLA    M      P   TY  +I   CK   
Sbjct: 46  LDPSDVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLAL 105

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM---WLHNLEPTSAT 520
           L +A   L  M   G+ PD  TYN ++   C+   L  A  L  QM   W    +  S  
Sbjct: 106 LADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYS-- 163

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y ILI GLC  G + +A  +   +           YT ++   C    V +A     +MV
Sbjct: 164 YTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMV 223

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
            KG   ++  Y      +     F    ++ E M I  H 
Sbjct: 224 NKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHS 263


>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
          Length = 845

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 151/485 (31%), Positives = 240/485 (49%), Gaps = 8/485 (1%)

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           + G    A  +F  M   G  P   ++N ++ G C  G +  A      MG+ G+ PD  
Sbjct: 195 RSGEVRAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVC 254

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+IL KG  +      A+K+ + +   G +P +VTY +L+   C  G + E  +L + M
Sbjct: 255 SYNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEM 314

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
              G ++N I ++VL+    KSG++D+A     EM+A GL PD  T++I+     +  K 
Sbjct: 315 AQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIA---ARAHKF 371

Query: 290 HKAIQLYNE--MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
             A QL ++  M S  +S +      ++  LC    + +A       I       V  +N
Sbjct: 372 GYAAQLVHDHDMFSSHMSADGL--DMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFN 429

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I  Y K G   EA +LYR + +  ++PS  TFN LI G C  G++ +A+ LL+ +   
Sbjct: 430 ALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSK 489

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G   S  ++T  ++AY  +GN    L    +M    +    + ++  I GLC+   + EA
Sbjct: 490 GYCLS-TSFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEA 548

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            Q   +M   G+ P+ ITYN+II + CK  ++ +A +L+  M    L P   T NILIDG
Sbjct: 549 YQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDG 608

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC  G LK  D LL+ +  + ++   V Y TII A+C   D++ AM F  +M+  G E  
Sbjct: 609 LCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPD 668

Query: 588 IRDYT 592
           I  Y 
Sbjct: 669 IFTYN 673



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 254/533 (47%), Gaps = 36/533 (6%)

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
            +E   +   PS+ + NA++  +C  G   VA GL  +M K G+ PD  SYNILI G C+
Sbjct: 206 FEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCV 265

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
            G   +A +    M R G EP  +TY+IL        ++  A ++  ++   G   + +T
Sbjct: 266 FGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTIT 325

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGF-----KLNVIA-------------------- 240
           + VLI GY + G +++       M ++G        N+IA                    
Sbjct: 326 FNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFS 385

Query: 241 -------YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
                    +L+  +C   R+D+A  LL      G+   +  ++ LI    K+    +A 
Sbjct: 386 SHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEAS 445

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN-CIQDVVLYNIMIDG 352
           +LY  M    ++P+S     +++GLC +  + EA++  + ++    C+     + I +D 
Sbjct: 446 ELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS--TSFTICLDA 503

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           Y + GN   A++ +  +    +    + F++ I G C+   V +A +    +   G+ P+
Sbjct: 504 YFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPN 563

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            +TY + ++A C+ GN+   L L+Q M    + P   T  ++I GLC++ KL+    LL 
Sbjct: 564 NITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLL 623

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           DM   G+TPD +TYNTII ++C+ +D+  A   +N+M +   EP   TYNI +  LC N 
Sbjct: 624 DMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNH 683

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            L  A  LL  L   + S   V Y T++   C++  + +AM    ++++  F+
Sbjct: 684 MLNQAGKLLDELVAVDCSPNSVTYNTLMDGICSDV-LDRAMILTGRLIKMAFK 735



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 143/591 (24%), Positives = 248/591 (41%), Gaps = 80/591 (13%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRNVY 64
           R+G V  A  V  +M     + S+ T+N++L    H     +   L   +  S    +V 
Sbjct: 195 RSGEVRAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVC 254

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           + +I+I G C     +DA    +        P+VV+ N ++   C  G    A+ LF  M
Sbjct: 255 SYNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEM 314

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS-- 182
            + G+  +  ++N+LI G   +G M++A     +M   G+ PD+ T++I+A   H     
Sbjct: 315 AQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYA 374

Query: 183 ------------------------------QISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
                                         ++  AW+++   + +G    +  +  LI  
Sbjct: 375 AQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAA 434

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA------ 266
           Y + G  EE  +L  +M   G   +   ++ L+  +C  GR+DEA  LL  M +      
Sbjct: 435 YSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS 494

Query: 267 ----------------------------VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
                                       +GL+ D + +S  I GLC+ D V++A Q + E
Sbjct: 495 TSFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAE 554

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M S+ I PN+  + +I+  LC+   +TEA     ++  S  + D+   NI+IDG  + G 
Sbjct: 555 MTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGK 614

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +     L   +    ++P  VT+N++I  +C+   +  A   ++ + + G EP   TY  
Sbjct: 615 LKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNI 674

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
           +M++ C    + +   LL E+      P  VTY  ++ G+C    L  A+ L   +  + 
Sbjct: 675 WMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGICSD-VLDRAMILTGRLIKMA 733

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS-----ATYNIL 524
             P+ IT N  +  FCK     + F     MW   L   S     AT NI+
Sbjct: 734 FKPNTITLNVFLSHFCK-----QGFGNRALMWAEKLREDSFVFDGATRNII 779



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 112/458 (24%), Positives = 195/458 (42%), Gaps = 54/458 (11%)

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           A  + L +   +G   EAL +L  +   G  P L   S L+R L +  +V  A  ++ EM
Sbjct: 150 ALRLALHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEM 209

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            ++   P+     A+LLG C + M+  A      +  S    DV  YNI+I G+   G  
Sbjct: 210 TAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWS 269

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A +++  +      P++VT+N L+   C  G++ +ARRL D +   G++ + +T+   
Sbjct: 270 RDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVL 329

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV------------------------- 454
           ++ Y + G + +  A  +EM+ + + P   T+ ++                         
Sbjct: 330 IDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMS 389

Query: 455 -------IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
                  +  LC   +L +A +LL      GV      +N +I ++ K     +A +L  
Sbjct: 390 ADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYR 449

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS---LTKVAYTTIIKAHC 564
            M    L P+S+T+N LI GLC  G L  A  LL    EH +S       ++T  + A+ 
Sbjct: 450 IMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLL----EHMVSKGYCLSTSFTICLDAYF 505

Query: 565 AEGDVHKAMTFFCQMVEKGFE---ISIRDYTKSF------------FCMMLSNGFPPDQE 609
            +G+   A+  +  M   G +   I+   Y                F  M S G  P+  
Sbjct: 506 RDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNI 565

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               ++ A  + G++    +L   M +SGL+PD +  N
Sbjct: 566 TYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSN 603



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 164/367 (44%), Gaps = 34/367 (9%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
            YS+ G+  +A  +   M +L L  S  T+N L                           
Sbjct: 434 AYSKEGLHEEASELYRIMNKLGLAPSSSTFNYL--------------------------- 466

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
                I GLC Q RL +A L L+    K +  S  S    +  Y + G A  A   +  M
Sbjct: 467 -----IMGLCNQGRLDEAQLLLEHMVSKGYCLS-TSFTICLDAYFRDGNAVGALKCWDDM 520

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              GL  D  +++  I+GLC    + EA +   +M   G+ P+ ITY+ +         +
Sbjct: 521 GNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNM 580

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A K++Q +   G  PDI T  +LI G C+ G ++    L   M S G   + + Y+ +
Sbjct: 581 TEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTI 640

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +++ C++  ++ A+  + +M   G +PD+ TY+I +  LC+   +++A +L +E+ +   
Sbjct: 641 INAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDC 700

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SPNS  +  ++ G+C  +++  A +    LI      + +  N+ +  + K G    A+ 
Sbjct: 701 SPNSVTYNTLMDGIC-SDVLDRAMILTGRLIKMAFKPNTITLNVFLSHFCKQGFGNRALM 759

Query: 365 LYRQLIE 371
              +L E
Sbjct: 760 WAEKLRE 766



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 9/136 (6%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPR 61
            Y R   ++ A+  + KM     +  I TYN  +++L    ++     L D++   +   
Sbjct: 643 AYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSP 702

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T + ++DG+C    L  A++         F P+ ++LN  +S +CK GF   A    
Sbjct: 703 NSVTYNTLMDGICSDV-LDRAMILTGRLIKMAFKPNTITLNVFLSHFCKQGFGNRA---- 757

Query: 122 CLMLKYGLHPDAFSYN 137
            LM    L  D+F ++
Sbjct: 758 -LMWAEKLREDSFVFD 772


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 158/629 (25%), Positives = 290/629 (46%), Gaps = 36/629 (5%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           W +Y+ +    T   +  N++ IDG C+   +  A   ++ +   +    +V+ N ++  
Sbjct: 218 WVMYNLVDGGVTKDVIGLNTL-IDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKA 276

Query: 108 YCKLGFAEVAKGLFCLMLKY-------------------GLHPDAFSYNILIHGLCIAGS 148
           +CK G    A+ LF  +L +                    L P   +Y  LI   C    
Sbjct: 277 FCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVG 336

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +EE+      M  +G+ PD +T S +  GF    +++ A  + +++   G DP+ V+Y  
Sbjct: 337 VEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYAT 396

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           +I    + G V E   L+  M+ +G   +++  + ++  + K G+  EA  +   +  + 
Sbjct: 397 IINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLN 456

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           L P+ VTYS L+ G CK  K+  A  +  +M  + + PN     +I+ G  +K M+++A 
Sbjct: 457 LAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAV 516

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
                ++  N + + ++Y I+IDGY K G    A    +++  +R+  S V F+ L+   
Sbjct: 517 DVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNL 576

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            + G++ +AR L+  +   G++P  V Y + ++ Y +EGN    L+++QEM+ K I    
Sbjct: 577 KRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDV 636

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           V Y  +IKGL +  K  +   +   M  +G+ PD ITYNTII ++C       A  +LN+
Sbjct: 637 VAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNE 695

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M  + + P + TYNILI GLC  G ++ A+  L  +       T + +  ++KA+     
Sbjct: 696 MKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEK 755

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEV 613
             K +    ++V  G E+S+  Y    + FC              M+  G   D      
Sbjct: 756 ADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNA 815

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           ++  +  G  +    +  + M   G+ P+
Sbjct: 816 LIRGYCTGSHVEKALKTYSQMFVDGIAPN 844



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 261/538 (48%), Gaps = 20/538 (3%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + VI G CQ+  +      L E   +      ++ N ++  YC++G  + A+ +   +
Sbjct: 164 TYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNL 223

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF------ 178
           +  G+  D    N LI G C AG M +A E   +  R  V+ D +TY+ L K F      
Sbjct: 224 VDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDL 283

Query: 179 ----HLLSQISGAWK---------VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
                L ++I G WK         V+ +  IK   P +VTYT LI  YC+   VEE   L
Sbjct: 284 TRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSL 343

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
            + M+  G   +V+  S +L   C+ G++ EA  L  EM  +GL P+ V+Y+ +I  L K
Sbjct: 344 YKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFK 403

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
             +V +A  L ++M  + IS +      ++ GL +     EA   F++++  N   + V 
Sbjct: 404 SGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVT 463

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y+ ++DGY KLG +  A  + +++ ++ + P+++TF+S+I G+ K G ++ A  +L  + 
Sbjct: 464 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 523

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
              + P+ + Y   ++ Y + G         +EM+++ +  ++V + +++  L +  ++ 
Sbjct: 524 QRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMD 583

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA  L+ DMY  G+ PD + Y ++I  + K  +   A  ++ +M   N+      YN LI
Sbjct: 584 EARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALI 643

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            GL   G   +   +   + E  ++   + Y TII  +C +G    A+    +M   G
Sbjct: 644 KGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYG 700



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/585 (26%), Positives = 267/585 (45%), Gaps = 35/585 (5%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V S+N ++   CK+G  ++A G   L     +  D  +YN +I G C  G +++    
Sbjct: 127 PDVFSVNVLVHSLCKVGDLDLALGY--LRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGL 184

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            ++M + G+  D+IT +IL KG+  +  +  A  V+  L+  G   D++    LI GYC+
Sbjct: 185 LSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCE 244

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM----------- 264
            G + +  +L E       K++++ Y+ LL + CK+G +  A  L  E+           
Sbjct: 245 AGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLK 304

Query: 265 --------EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
                   E   L+P LVTY+ LI   CK   V ++  LY +M    I P+     +IL 
Sbjct: 305 NNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILY 364

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           G C    +TEA + F  +       + V Y  +I+   K G + EA  L  Q++ + IS 
Sbjct: 365 GFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISF 424

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            IVT  +++ G  K GK  +A  + +TI    L P+ VTY+  ++ YC+ G ++    +L
Sbjct: 425 DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVL 484

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           Q+ME + + P  +T++ +I G  K+  L +AV +L +M    V P+ I Y  +I  + K 
Sbjct: 485 QKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 544

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
            +   A     +M    LE ++  ++IL++ L   G +  A  L++ +    I    V Y
Sbjct: 545 GEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNY 604

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI-------------RDYTKSFFC-MMLSN 602
            ++I  +  EG+   A++   +M EK     +               Y   + C  M+  
Sbjct: 605 ASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIEL 664

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           G  PD      ++  +   G      ++   M   G++P+    N
Sbjct: 665 GLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYN 709



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/582 (24%), Positives = 272/582 (46%), Gaps = 25/582 (4%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I+ L +  R+ +A     +   +     +V+   +M    K+G  + A+ +F  +LK
Sbjct: 395 ATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK 454

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             L P+  +Y+ L+ G C  G ME A      M +  V P+ IT+S +  G+     +S 
Sbjct: 455 LNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSK 514

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  V+++++ +   P+ + Y +LI GY + G  +      + M S+  + + + + +LL+
Sbjct: 515 AVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLN 574

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           ++ + GR+DEA  L+ +M + G+ PD+V Y+ LI G  K+     A+ +  EM  K I  
Sbjct: 575 NLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRF 634

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +  A+ A++ GL       + R     +I      D + YN +I+ Y   G   +A+ + 
Sbjct: 635 DVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDIL 693

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++    I P+ VT+N LI G CK G V  A   LD + +    P+ +T+   + AY   
Sbjct: 694 NEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRS 753

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
               ++L + +++    +  +   Y  +I   C+    ++A  +L++M   G++ D +TY
Sbjct: 754 EKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTY 813

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG----DLKNADCLLV 542
           N +IR +C    + KA +  +QM++  + P   TYN L+ GL   G     ++  + L+ 
Sbjct: 814 NALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVS 873

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
            + E  +      Y  ++  +   G+  K +    +M+ KGF  +++ Y           
Sbjct: 874 EMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTY----------- 922

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                     V++  + + G +    EL   ++  G +P+ F
Sbjct: 923 ---------NVLISDYAKSGKMIEARELLNDLLTKGRIPNSF 955



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 241/495 (48%), Gaps = 6/495 (1%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K++  P N  T S ++DG C+  +++ A L LQ+   +   P+V++ ++I++ Y K G 
Sbjct: 453 LKLNLAP-NCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGM 511

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A  +   M++  + P+   Y ILI G   AG  + A +F  +M    +E   + + I
Sbjct: 512 LSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDI 571

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L      + ++  A  +I  +  KG DPDIV Y  LI GY + GN    L + + M  + 
Sbjct: 572 LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKN 631

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            + +V+AY+ L+  + + G+ D    +   M  +GL PD +TY+ +I   C + K   A+
Sbjct: 632 IRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTEDAL 690

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            + NEM S  I PN+  +  ++ GLC+   + +A    D +++   +   + +  ++  Y
Sbjct: 691 DILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAY 750

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            +     + +Q++ +L+   +  S+  +N+LI  FC+ G    A+ +LD +   G+    
Sbjct: 751 SRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADL 810

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ----WKLQEAVQ 469
           VTY   +  YC   ++++ L    +M    I P   TY  ++ GL         ++E  +
Sbjct: 811 VTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEK 870

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           L+ +M   G+ P+  TY+ ++  + +  + +K   L  +M      PT  TYN+LI    
Sbjct: 871 LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 930

Query: 530 VNGDLKNADCLLVSL 544
            +G +  A  LL  L
Sbjct: 931 KSGKMIEARELLNDL 945



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 236/492 (47%), Gaps = 10/492 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y + G +  A  V+ KM++  +  ++ T++S++       ++    D ++     RNV  
Sbjct: 471 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLR-EMVQRNVMP 529

Query: 66  NSIV----IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+IV    IDG  +      A  F +E   +    S V  + +++   ++G  + A+ L 
Sbjct: 530 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 589

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G+ PD  +Y  LI G    G+   AL    +M    +  D + Y+ L KG   L
Sbjct: 590 IDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRL 649

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +    + V  +++  G  PD +TY  +I  YC  G  E+ L +   M S G   N + Y
Sbjct: 650 GKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTY 708

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++L+  +CK+G +++A   L EM  +   P  +T+  L++   + +K  K +Q++ ++ +
Sbjct: 709 NILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVA 768

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +  +   +  ++   C   M  +A++  D ++      D+V YN +I GY    ++ +
Sbjct: 769 SGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEK 828

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNG----KVADARRLLDTIKLHGLEPSAVTYT 417
           A++ Y Q+    I+P+I T+N+L+ G    G     + +  +L+  +   GL P+A TY 
Sbjct: 829 ALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYD 888

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++ Y   GN ++ + L  EM TK   PT  TY V+I    K  K+ EA +LL D+   
Sbjct: 889 ILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTK 948

Query: 478 GVTPDQITYNTI 489
           G  P+  TY+ +
Sbjct: 949 GRIPNSFTYDIL 960



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 220/434 (50%), Gaps = 11/434 (2%)

Query: 21  KMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
           +MK   L+ S   ++ LL NL+     D    L  D+       ++   + +IDG  ++ 
Sbjct: 556 EMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEG 615

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
               A+  +QE   K     VV+ NA++    +LG  +  + +   M++ GL PD  +YN
Sbjct: 616 NQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYN 674

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
            +I+  CI G  E+AL+  N+M  +G+ P+A+TY+IL  G      +  A   + ++L+ 
Sbjct: 675 TIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVM 734

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
              P  +T+  L+  Y +    ++ L++ E +++ G +L++  Y+ L++  C+ G   +A
Sbjct: 735 EFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKA 794

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             +L EM   G+  DLVTY+ LIRG C    V KA++ Y++M    I+PN   +  +L G
Sbjct: 795 KVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGG 854

Query: 318 LCEKEMITEARMYFDSLIMS----NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           L    ++ E     + L+        + +   Y+I++ GY ++GN  + + L+ ++I K 
Sbjct: 855 LSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKG 914

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE---EGNIQ 430
             P++ T+N LI  + K+GK+ +AR LL+ +   G  P++ TY      +     E  I 
Sbjct: 915 FVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEID 974

Query: 431 RLLALLQEMETKAI 444
           R L    E+E K +
Sbjct: 975 RSLKRSYEIEVKKL 988



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/525 (24%), Positives = 234/525 (44%), Gaps = 36/525 (6%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A   F  M   GL P    +N L++    +G + +     +DM   GV PD  + ++L  
Sbjct: 78  ASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVH 137

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
               +  +  A   ++   +   D D VTY  +I G+CQ G V++G  L   M+ +G   
Sbjct: 138 SLCKVGDLDLALGYLRNNDV--VDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCF 195

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + I  ++L+   C+ G +  A  ++Y +   G+  D++  + LI G C+   + +A +L 
Sbjct: 196 DSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELI 255

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI-------------------MS 337
                  +  +   +  +L   C+   +T A   F+ ++                   + 
Sbjct: 256 ENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIK 315

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
           N    +V Y  +I  Y K   + E+  LY+++I   I P +VT +S++YGFC++GK+ +A
Sbjct: 316 NLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEA 375

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             L   +   GL+P+ V+Y T +N+  + G +     L  +M  + I    VT T V+ G
Sbjct: 376 AVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDG 435

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           L K  K +EA ++ E +  + + P+ +TY+ ++  +CK   +  A  +L +M   ++ P 
Sbjct: 436 LFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPN 495

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             T++ +I+G    G L  A  +L  + + N+    + Y  +I  +   G+   A  F  
Sbjct: 496 VITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCK 555

Query: 578 QMVEKGFE---------------ISIRDYTKSFFCMMLSNGFPPD 607
           +M  +  E               +   D  +S    M S G  PD
Sbjct: 556 EMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPD 600



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 127/557 (22%), Positives = 247/557 (44%), Gaps = 51/557 (9%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
            FC +++  L  D FS          A  +   L F N           + Y   A G  
Sbjct: 61  FFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWN----------TLLYQFNASG-- 108

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           L+SQ+   +     +L  G  PD+ +  VL+   C++G+++  L L  +  +    ++ +
Sbjct: 109 LVSQVKLMY---SDMLFCGVVPDVFSVNVLVHSLCKVGDLD--LALGYLRNNDVVDIDNV 163

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ ++   C+ G +D+  GLL EM   GL  D +T +IL++G C+   V  A  +   +
Sbjct: 164 TYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNL 223

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               ++ +      ++ G CE  ++++A    ++   S+   D+V YN ++  + K G++
Sbjct: 224 VDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDL 283

Query: 360 GEAVQLYRQLIE-------------------KRISPSIVTFNSLIYGFCKNGKVADARRL 400
             A  L+ +++                    K + P++VT+ +LI  +CK   V ++  L
Sbjct: 284 TRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSL 343

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
              + ++G+ P  VT ++ +  +C  G +     L +EM    + P HV+Y  +I  L K
Sbjct: 344 YKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFK 403

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             ++ EA  L   M V G++ D +T  T++    K    ++A ++   +   NL P   T
Sbjct: 404 SGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVT 463

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y+ L+DG C  G ++ A+ +L  +++ ++    + +++II  +  +G + KA+    +MV
Sbjct: 464 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 523

Query: 581 EKG---------------FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
           ++                F+   +D    F   M S        I +++L    + G + 
Sbjct: 524 QRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMD 583

Query: 626 SVFELAAVMIKSGLLPD 642
               L   M   G+ PD
Sbjct: 584 EARSLIIDMYSKGIDPD 600



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 174/402 (43%), Gaps = 11/402 (2%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
            Y + G    A+ ++ +MKE +++  +  YN+L   L  L   D  +     I++   P  
Sbjct: 611  YFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDC 670

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +  N+I I+  C + + +DA+  L E       P+ V+ N ++   CK G  E A+    
Sbjct: 671  ITYNTI-INTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALD 729

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             ML     P   ++  L+     +   ++ L+    +   G+E     Y+ L   F  L 
Sbjct: 730  EMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLG 789

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
                A  V+ +++ +G   D+VTY  LI GYC   +VE+ LK    M   G   N+  Y+
Sbjct: 790  MTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYN 849

Query: 243  VLLSSMCKSG----RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             LL  +  +G     ++E   L+ EM   GL P+  TY IL+ G  +     K I L+ E
Sbjct: 850  TLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIE 909

Query: 299  MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
            M +K   P    +  ++    +   + EAR   + L+    I +   Y+I+  G++ L  
Sbjct: 910  MITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSY 969

Query: 359  IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
              E  +  ++  E  +   ++        F K    A+ RRL
Sbjct: 970  EPEIDRSLKRSYEIEVKKLLIEMGRKGLKFSKK---AEIRRL 1008


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 166/623 (26%), Positives = 273/623 (43%), Gaps = 57/623 (9%)

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           C+   L+ AI  L+ +      P+ V+ N +++    L     A  +   M K G+  D 
Sbjct: 84  CRLRLLRPAIALLRSSR-----PTTVAYNILLA---ALSDHAHAPAVLAEMCKRGVPFDG 135

Query: 134 FSYNILIHGLC--------------------------------IAG--SMEEALEFTNDM 159
            + N L+ GLC                                IAG      AL   + M
Sbjct: 136 VTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRM 195

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              G+  D + Y+ L  GF    Q+  A  V+  +   G DP++ TYT  I  YC+   V
Sbjct: 196 TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGV 255

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           EE   L E M+  G  L+V+  S L++ +C+ GR  EA  L  EM+ VG  P+ VTY  L
Sbjct: 256 EEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTL 315

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I  L K  +  + + L  EM S+ +  +   + A++  L ++    E +      +  N 
Sbjct: 316 IDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNL 375

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             + V Y ++ID   K  N+ EA Q+  ++ EK ISP++VTF+S+I GF K G +  A  
Sbjct: 376 SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE 435

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
               +K  G+ P+ VTY T ++ + +       L +  +M  + +         ++ GL 
Sbjct: 436 YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLR 495

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           +  K++EA+ L +D    G++ D + Y T+I    K  D+  AF+   ++   N+ P + 
Sbjct: 496 QNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAV 555

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            YN+ I+ LC+ G  K A   L  ++   +   +  Y T+I +HC +G+  KA+    +M
Sbjct: 556 VYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615

Query: 580 ---------------VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
                          V   F     +  K     M+S GF P       +L A  Q   L
Sbjct: 616 KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRL 675

Query: 625 GSVFELAAVMIKSGLLPDKFLIN 647
             + ++   M+ +GL  D  + N
Sbjct: 676 DVILDIHEWMMNAGLHADITVYN 698



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 163/634 (25%), Positives = 291/634 (45%), Gaps = 45/634 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNS-LLYNLRHTDI--MWDLYDDIKVSETPRN 62
           + R G V  A  V+  MKE  +  ++ TY   ++Y  R   +   +DLY+ +  +    +
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQET-----------------------AGKEF----G 95
           V T S ++ GLC+  R  +A    +E                         GKE     G
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 96  PSV--------VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
             V        V+  A+M    K G  +  K      L   L P+  +Y +LI  LC A 
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAH 393

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           +++EA +   +M    + P+ +T+S +  GF     +  A +  + +  +G +P++VTY 
Sbjct: 394 NVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYG 453

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            LI G+ +    +  L++   ML +G K+N      L++ + ++G+I+EA+ L  +    
Sbjct: 454 TLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGS 513

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL  D V Y+ LI GL K   +  A +   E+  + + P++  +   +  LC      EA
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEA 573

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           + +   +       D   YN MI  + + G   +A++L  ++    I P+++T+N+L+ G
Sbjct: 574 KSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
               G V  A+ LL+ +   G  PS++T+   + A  +   +  +L + + M    +   
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
              Y  +++ LC     ++A  +LE+M   G+ PD IT+N +I   CK   L  AF    
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           QM   N+ P  AT+N L+ GL   G +  A  +L+ +++  +    + Y  +   H  + 
Sbjct: 754 QMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQS 813

Query: 568 DVHKAMTFFCQMVEKGF--EIS-----IRDYTKS 594
           +  +AM  +C+MV KGF  ++S     I D+TK+
Sbjct: 814 NKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/567 (27%), Positives = 270/567 (47%), Gaps = 29/567 (5%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           VV  N +++ +C+ G  + A+G+  +M + G+ P+  +Y   I   C    +EEA +   
Sbjct: 204 VVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYE 263

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            M R+GV  D +T S L  G     + S A+ + +++   G+ P+ VTY  LI    + G
Sbjct: 264 GMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAG 323

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
             +E L L   M+S+G  ++++ Y+ L+  + K G+ DE    L    +  L P+ VTY+
Sbjct: 324 RGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYT 383

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           +LI  LCK   V +A Q+  EM  K ISPN     +++ G  ++ ++ +A  Y   +   
Sbjct: 384 VLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
               +VV Y  +IDG+ K      A+++Y  ++ + +  +    +SL+ G  +NGK+ +A
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             L       GL    V YTT ++   + G++       QE+  + + P  V Y V I  
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LC   K +EA   L +M  +G+ PDQ TYNT+I S C+  +  KA +LL++M + +++P 
Sbjct: 564 LCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG-------DVH 570
             TYN L+ GL   G ++ A  LL  +     S + + +  +++A C++        D+H
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA-CSQSRRLDVILDIH 682

Query: 571 KAMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPDQEICEVML 615
           +       M+  G    I  Y       C              ML +G  PD      ++
Sbjct: 683 E------WMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +   +   L + F   A M+   + P+
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPN 763



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 168/685 (24%), Positives = 286/685 (41%), Gaps = 89/685 (12%)

Query: 44  TDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDA--ILFLQETAGKEFGPSVVSL 101
           T     + D +     P +V   + ++ G C+  ++  A  +L + + AG +  P+V + 
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVD--PNVATY 242

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
              +  YC+    E A  L+  M++ G+  D  + + L+ GLC  G   EA     +M +
Sbjct: 243 TPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDK 302

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            G  P+ +TY  L        +      ++ +++ +G   D+VTYT L+    + G  +E
Sbjct: 303 VGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDE 362

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
                   LS     N + Y+VL+ ++CK+  +DEA  +L EME   + P++VT+S +I 
Sbjct: 363 VKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVIN 422

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG-----------------LCE---- 320
           G  K+  + KA +    M  + I+PN   +G ++ G                 LCE    
Sbjct: 423 GFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKV 482

Query: 321 --------------KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
                            I EA   F     S    D V Y  +IDG  K G++  A +  
Sbjct: 483 NKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFG 542

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           ++L+++ + P  V +N  I   C  GK  +A+  L  ++  GL+P   TY T + ++C +
Sbjct: 543 QELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRK 602

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT- 485
           G   + L LL EM+  +I P  +TY  ++ GL     +++A  LL +M   G +P  +T 
Sbjct: 603 GETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTH 662

Query: 486 ----------------------------------YNTIIRSFCKCKDLRKAFQLLNQMWL 511
                                             YNT+++  C     RKA  +L +M  
Sbjct: 663 RRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLG 722

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
             + P + T+N LI G C +  L NA      +   NIS     + T++    + G + +
Sbjct: 723 SGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGE 782

Query: 572 AMTFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLI 616
           A T   +M + G E +   Y                   +C M+  GF P       ++ 
Sbjct: 783 AGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALIS 842

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLP 641
            F + G +    EL   M K G+ P
Sbjct: 843 DFTKAGMMTQAKELFKDMQKRGVHP 867



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 231/518 (44%), Gaps = 35/518 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T S VI+G  ++  L  A  + +    +   P+VV+   ++  + K    + A  ++
Sbjct: 413 NVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVY 472

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML  G+  + F  + L++GL   G +EEA+    D    G+  D + Y+ L  G    
Sbjct: 473 HDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKA 532

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A+K  Q+L+ +   PD V Y V I   C +G  +E       M + G K +   Y
Sbjct: 533 GDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTY 592

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++ S C+ G   +AL LL+EM+   +KP+L+TY+ L+ GL     V KA  L NEM S
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 302 KRISPNSFAHGAILLG-----------------------------------LCEKEMITE 326
              SP+S  H  +L                                     LC   M  +
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A +  + ++ S    D + +N +I G+ K  ++  A   Y Q++ + ISP+I TFN+L+ 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G    G++ +A  +L  ++  GLEP+ +TY      + ++ N    + L  EM  K   P
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              TY  +I    K   + +A +L +DM   GV P   TY+ ++  + + ++  +  + L
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCL 892

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
             M      P+  T + +       G    A  LL +L
Sbjct: 893 KDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/541 (25%), Positives = 239/541 (44%), Gaps = 35/541 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T +++ID LC+   + +A   L E   K   P+VV+ +++++ + K G  + A    
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYK 437

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M + G++P+  +Y  LI G       + ALE  +DM   GV+ +      L  G    
Sbjct: 438 RMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQN 497

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  + +     G   D V YT LI G  + G++    K  + ++ +    + + Y
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +V ++ +C  G+  EA   L EM  +GLKPD  TY+ +I   C++ +  KA++L +EM  
Sbjct: 558 NVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSL--------------IMSNCIQ------ 341
             I PN   +  ++ GL     + +A+   + +              ++  C Q      
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 342 ---------------DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
                          D+ +YN ++      G   +A  +  +++   I+P  +TFN+LI 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G CK+  + +A      +    + P+  T+ T +      G I     +L EME   + P
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
            ++TY ++  G  KQ    EA++L  +M   G  P   TYN +I  F K   + +A +L 
Sbjct: 798 NNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELF 857

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
             M    + PTS TY+IL+ G     +       L  ++E   S +K   + I +A    
Sbjct: 858 KDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKP 917

Query: 567 G 567
           G
Sbjct: 918 G 918



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 239/508 (47%), Gaps = 3/508 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           + + G++  A      MKE  +  ++ TY +L+   +  +  D   ++Y D+       N
Sbjct: 424 FVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVN 483

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +    +++GL Q  ++++A+   ++ +G       V+   ++    K G    A     
Sbjct: 484 KFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQ 543

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ++   + PDA  YN+ I+ LC+ G  +EA  F  +M   G++PD  TY+ +        
Sbjct: 544 ELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKG 603

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           + + A K++ ++ +    P+++TY  L+ G    G VE+   L   M+S GF  + + + 
Sbjct: 604 ETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +L +  +S R+D  L +   M   GL  D+  Y+ L++ LC      KA  +  EM   
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I+P++    A++LG C+   +  A   +  ++  N   ++  +N ++ G   +G IGEA
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +  ++ +  + P+ +T++ L  G  K     +A RL   +   G  P   TY   ++ 
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           + + G + +   L ++M+ + + PT  TY +++ G  +     E  + L+DM   G +P 
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPS 903

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           + T + I R+F K     +A +LL  ++
Sbjct: 904 KGTLSFICRAFSKPGMTWQAQRLLKNLY 931



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 169/387 (43%), Gaps = 48/387 (12%)

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL S C+   +  A+ LL        +P  V Y+IL+  L   D  H A  +  EMC 
Sbjct: 77  NALLYSHCRLRLLRPAIALLRSS-----RPTTVAYNILLAAL--SDHAH-APAVLAEMCK 128

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSL--IMSNCIQDVVLYNIMIDGYVKLGNI 359
           + +  +      +L GLC    +  A    D    I         L  + I G+   G+ 
Sbjct: 129 RGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAGF---GDT 185

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A+ +  ++  + +   +V +N+L+ GFC+ G+V  AR +LD +K  G++P+  TYT F
Sbjct: 186 PAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPF 245

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +  YC    ++    L + M    +    VT + ++ GLC+  +  EA  L  +M  +G 
Sbjct: 246 IVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGA 305

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQM-----------------WL----------- 511
            P+ +TY T+I S  K    ++   LL +M                 WL           
Sbjct: 306 APNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKD 365

Query: 512 -------HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
                   NL P   TY +LID LC   ++  A+ +L+ ++E +IS   V ++++I    
Sbjct: 366 TLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFV 425

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDY 591
             G + KA  +   M E+G   ++  Y
Sbjct: 426 KRGLLDKATEYKRMMKERGINPNVVTY 452



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 106/252 (42%), Gaps = 9/252 (3%)

Query: 22  MKELDLKVSIQTYNSLLYNL------RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQ 75
           M    L   I  YN+LL  L      R   ++  L + +     P  +  N++++ G C+
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVV--LEEMLGSGIAPDTITFNALIL-GHCK 741

Query: 76  QSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFS 135
            S L +A     +   +   P++ + N ++     +G    A  +   M K GL P+  +
Sbjct: 742 SSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLT 801

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           Y+IL  G     +  EA+    +M   G  P   TY+ L   F     ++ A ++ + + 
Sbjct: 802 YDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQ 861

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
            +G  P   TY +L+ G+ +I N  E  K  + M  +GF  +    S +  +  K G   
Sbjct: 862 KRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTW 921

Query: 256 EALGLLYEMEAV 267
           +A  LL  +  V
Sbjct: 922 QAQRLLKNLYRV 933



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 47/228 (20%), Positives = 80/228 (35%), Gaps = 50/228 (21%)

Query: 398 RRLLDTIKLHGLEPSAVTY--------TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           RRL+  +   GL  +A+ +           + ++C    ++  +ALL+        PT V
Sbjct: 50  RRLIPALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTV 104

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC------------- 496
            Y +++  L        A  +L +M   GV  D +T NT++   C+              
Sbjct: 105 AYNILLAALSDH---AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRA 161

Query: 497 ---------------------KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
                                 D   A  + ++M    L      YN L+ G C  G + 
Sbjct: 162 GGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVD 221

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            A  +L  ++E  +      YT  I  +C    V +A   +  MV  G
Sbjct: 222 AARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNG 269


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 157/584 (26%), Positives = 274/584 (46%), Gaps = 49/584 (8%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLG 112
           ++   PR   + ++V+     ++ + DA L          G  P + S NA++  + +  
Sbjct: 74  RLRHRPRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRAR 133

Query: 113 FAEVAKGLFCLMLKYG-----LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
               A   F   L +G     + P+  +YNI++  LC  G ++ A+   + + R  V PD
Sbjct: 134 RFSDADAFFA-SLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPD 192

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            ITYS L  G     ++  A  ++ ++   G  PD+V Y  L+ G  + G  E+ +++ +
Sbjct: 193 CITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWD 252

Query: 228 VMLSQ-GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
            ++   G + N+  Y+V+L  +CK GR  E   +   M A  L+PD++TY ILI GLC+ 
Sbjct: 253 KLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRS 312

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
             V  A ++Y+E+    +  ++  + +++ G C+   + EA  ++DS   +  ++++  Y
Sbjct: 313 GDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG-LRNLRTY 371

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRIS--PSIVTFNSLIYGFCKNG------------ 392
           NIMI G    G + EA++L+  L+EK ++  P  VTF +LI+G C+NG            
Sbjct: 372 NIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEA 430

Query: 393 -----------------KVADARRLLDTIKLH------GLEPSAVTYTTFMNAYCEEGNI 429
                             + +  RL+D +K++      G +P++  Y   ++ +C+    
Sbjct: 431 RVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRT 490

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
              + +  +M      PT +TY  +I GLCK  K QEA  +  +M   G TPD  TY ++
Sbjct: 491 SDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSL 550

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE-HN 548
           IR     K +  A  +  Q+    L+     +NILI GLC  G +  A  +   ++E  N
Sbjct: 551 IRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKN 610

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
                V Y T++      G + KA T +  + E G E  I  Y 
Sbjct: 611 CPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYN 654



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 259/526 (49%), Gaps = 6/526 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+ T +IV+  LC +  L  A+        ++  P  ++ + +M    K    + A  L 
Sbjct: 157 NLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLL 216

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH-GVEPDAITYSILAKGFHL 180
             M + G+ PD   YN L+ G   AG  E+ +   + + +  G  P+  TY+++  G   
Sbjct: 217 DEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCK 276

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +     +V ++++     PD++TY +LI G C+ G+V+   ++   ++  G  ++   
Sbjct: 277 FGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAM 336

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+   C++GR+ EA          GL+ +L TY+I+I+GL     V +AI+L+ ++ 
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELW-DLL 394

Query: 301 SKRIS--PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
            K ++  P++   G ++ GLC+     +A   F+   +S    DV  Y+ MI+G   +G 
Sbjct: 395 EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGR 454

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + +AV++Y ++ +    P+   +N+LI GFC+  + +DA R+   +  +G  P+ +TY T
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++  C+    Q   ++ +EM      P   TY  +I+GL    K+ +A+ + + +   G
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQM-WLHNLEPTSATYNILIDGLCVNGDLKNA 537
           +  D + +N +I   C    + +A  + + M    N  P   TYN L+DGL   G +  A
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKA 634

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             L  S+ E  +    ++Y T IK  C+   +H+ +    +++ +G
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRG 680



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 155/576 (26%), Positives = 273/576 (47%), Gaps = 9/576 (1%)

Query: 3   AFVYSRTGMVHDAVFVIAKMKELDLKVS--IQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           AFV +R     DA F          +++  +QTYN +L +L      D    L+D ++  
Sbjct: 128 AFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRR 187

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEV 116
           +   +  T S ++ GL +Q RL  A+  L E       P VV  NA++    K G F +V
Sbjct: 188 QVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKV 247

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
            +    L+   G  P+  +YN+++ GLC  G  +E  E    M  + ++PD ITY IL  
Sbjct: 248 MRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIH 307

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G      + GA +V  +++  G   D   Y  L+ G+CQ G V+E  K  +     G + 
Sbjct: 308 GLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR- 366

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEA-VGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           N+  Y++++  +  SG +DEA+ L   +E  V   PD VT+  LI GLC+    +KA  +
Sbjct: 367 NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTI 426

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           + E        + F++ +++ GLC    + +A   ++ +    C  +  +YN +I G+ +
Sbjct: 427 FEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQ 486

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +    +AV++Y ++ +   SP+++T+N+LI G CK  K  +A  +   +  +G  P   T
Sbjct: 487 VYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITT 546

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y + +     +  I   L++ +++  K +    + + ++I GLC   K+ EA+ +  DM 
Sbjct: 547 YGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMK 606

Query: 476 -VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
                 P+ +TYNT++    +   + KA  L   +    LEP   +YN  I GLC    +
Sbjct: 607 EKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRI 666

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
                LL  +    I  T + +  +++A    G + 
Sbjct: 667 HEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 27/257 (10%)

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG----PTHVTY 451
           DA R L +I   G  P   ++   ++A+          A    +   A G    P   TY
Sbjct: 104 DAFRALPSIL--GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTY 161

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            +V++ LC +  L  AV L + +    V PD ITY+T++    K   L  A  LL++M  
Sbjct: 162 NIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPR 221

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA-YTTIIKAHCAEGDVH 570
             ++P    YN L+ G    G+ +    +   L +   +   +A Y  ++   C      
Sbjct: 222 SGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCK----- 276

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
                F +  E G E+  R         M++N   PD     +++    + GD+     +
Sbjct: 277 -----FGRFKEVG-EVWER---------MVANNLQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 631 AAVMIKSGLLPDKFLIN 647
            + +IK+GL+ D  + N
Sbjct: 322 YSEIIKTGLVIDAAMYN 338



 Score = 40.4 bits (93), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 4/112 (3%)

Query: 9   TGMVHDAVFVIAKMKEL-DLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
            G V +A+ V + MKE  +   ++ TYN+L   LY   + D    L+  I       ++ 
Sbjct: 592 AGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDII 651

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           + +  I GLC   R+ + I  L E   +   P+V++ N ++    K G  +V
Sbjct: 652 SYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQV 703


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 161/600 (26%), Positives = 282/600 (47%), Gaps = 46/600 (7%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
             +AI  L +T  + F P ++S N +M+R  + G  ++A  ++  + + GL+P+ ++Y I
Sbjct: 173 FDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGI 232

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT---------------------------- 170
            I  LC  G+ EEA++   +M   GV P+A+T                            
Sbjct: 233 FIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAAN 292

Query: 171 -------YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
                  Y+ + +GF    ++  A  V   ++ +G  PD   Y  LI  YC+ GN+ + +
Sbjct: 293 WPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAV 352

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
            L   M+S G K N +  S +L  +C+ G   E +    E    G+  D V Y+I++  L
Sbjct: 353 ALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDAL 412

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CK  KV +A++L NEM  +R+S +   +  ++ G C +  + +A+  F+ +       D+
Sbjct: 413 CKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDI 472

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V YNI++ G+ + G   EA++L   +  + + P+  T N +I G C  GKV +A   L+T
Sbjct: 473 VTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNT 532

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           ++   LE     Y+  ++ YC+    ++   L   +  + I     +   ++  LC + +
Sbjct: 533 LEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGE 588

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
             +A+ LLE M  + V P+QI Y  +I +FC+  D+++A  + + +    + P   TY +
Sbjct: 589 YDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTM 648

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +I+G C    L+ A  +   ++E  I    + YT ++  H     V+  M    Q   KG
Sbjct: 649 MINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGH---SKVNLKMARSLQF-SKG 704

Query: 584 FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH-QGGDLGSVFELAAVMIKSGLLPD 642
            E    D +  F+  M   G  PD  +C  +LI  H +  +L     L   MI  GL PD
Sbjct: 705 SEEEKMDAS-PFWSEMKEMGIKPDV-VCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPD 762



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 164/642 (25%), Positives = 297/642 (46%), Gaps = 57/642 (8%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RH--TDIMWDLYDDIKVS 57
           ML   Y R GM  +A+  + + K       I + N L+  L  H   D+   +Y  +K  
Sbjct: 162 MLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRL 221

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK-----LG 112
               N YT  I I  LC++   ++A+   +E       P+ V+ +  +   C      LG
Sbjct: 222 GLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLG 281

Query: 113 FAEV------------------------------AKGLFCLMLKYGLHPDAFSYNILIHG 142
           +  +                              A+ +F  M+  G+ PD + Y  LIH 
Sbjct: 282 YEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHA 341

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
            C AG++ +A+   NDM  +G++ + +  S + +    +   S      ++    G   D
Sbjct: 342 YCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLD 401

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
            V Y +++   C++G VEE ++L   M  +   L+V+ Y+ L++  C  G++ +A  +  
Sbjct: 402 EVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFE 461

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           EM+  G++PD+VTY+IL+ G  +     +A++L + + ++ + PNS  H  I+ GLC   
Sbjct: 462 EMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAG 521

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            + EA  + ++L    C+++   Y+ M+DGY K     +A +L+ +L ++ I     +  
Sbjct: 522 KVKEAEAFLNTL-EDKCLEN---YSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCF 577

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
            L+   C  G+   A  LL+ +    +EP+ + Y   + A+C +G+++R   +   +  +
Sbjct: 578 KLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVER 637

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII-----------R 491
            I P  +TYT++I G C+   L+EA  +  DM   G+ PD ITY  ++           R
Sbjct: 638 GITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMAR 697

Query: 492 S--FCKCKDLRK--AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           S  F K  +  K  A    ++M    ++P    Y +LID  C   +L++A  L   +   
Sbjct: 698 SLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIAR 757

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            +    V YT ++ + C+ GD+ +A+T   +M  KG E   R
Sbjct: 758 GLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSR 799



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 161/622 (25%), Positives = 280/622 (45%), Gaps = 45/622 (7%)

Query: 15  AVFVIAKMKELDLKVSIQTYN--SLLYNLRH-TDIMWDLYDDIKVSETPRNVYTNSIVID 71
           AV+  +K    D  + + T     + YNL++  ++ W  +  +K S    NV T + +I 
Sbjct: 45  AVYTYSKDSVGDRFIDLNTSRVVEIFYNLKNEPNLAWSFFTQLKESGFQHNVDTYAALIR 104

Query: 72  GLCQQSRLQDAILFLQETAGKE---FGPSVVSL-----------------------NAIM 105
            LC+    +     L E  G +    G  + +L                       + ++
Sbjct: 105 VLCRWRLERKLQSLLSEIVGSKESVLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLV 164

Query: 106 SRYCKLG-FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
             Y ++G F E    LF    + G  P   S N L++ L   G ++ A+     + R G+
Sbjct: 165 KAYVRVGMFDEAIDALF-QTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGL 223

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            P+  TY I  K          A  V +++   G +P+ VT +  I G C     + G +
Sbjct: 224 NPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYE 283

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
               + +  + ++  AY+ ++   C   ++ EA  +  +M   G+ PD   Y  LI   C
Sbjct: 284 ALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYC 343

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K   + +A+ L+N+M S  I  N     +IL  LCE  M +E    F     S    D V
Sbjct: 344 KAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEV 403

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           LYNI++D   KLG + EAV+L  ++  +R+S  +V + +LI G+C  GK+ DA+ + + +
Sbjct: 404 LYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEM 463

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           K  G+EP  VTY   +  +   G  +  L LL  + T+ + P   T+  +I+GLC   K+
Sbjct: 464 KERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKV 523

Query: 465 QEAVQLLEDMYVIGVTPDQI--TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           +EA   L  +       D+    Y+ ++  +CK    RKA++L +++    +     +  
Sbjct: 524 KEAEAFLNTL------EDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCF 577

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            L+  LC+ G+   A  LL  +   ++   ++ Y  +I A C +GD+ +A   F  +VE+
Sbjct: 578 KLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVER 637

Query: 583 GFEISIRDYTKSFFCMMLSNGF 604
           G    +  YT      M+ NG+
Sbjct: 638 GITPDVITYT------MMINGY 653



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/574 (24%), Positives = 271/574 (47%), Gaps = 57/574 (9%)

Query: 8   RTGMVHDAVFVIAKMKELDLK---VSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
           R G   +AV V  +M+E  +    V+  TY   L + + +D+ ++    ++ +  P + +
Sbjct: 239 RKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTF 298

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK-------------- 110
             + VI G C + +L++A     +   +   P      A++  YCK              
Sbjct: 299 AYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDM 358

Query: 111 ---------------------LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                                +G A      F      G+  D   YNI++  LC  G +
Sbjct: 359 VSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKV 418

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           EEA+E  N+M    +  D + Y+ L  G+ L  ++  A  + +++  +G +PDIVTY +L
Sbjct: 419 EEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNIL 478

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + G+ + G  +E L+L + + +QG K N   ++ ++  +C +G++ EA   L  +E   L
Sbjct: 479 VGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCL 538

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           +     YS ++ G CK +   KA +L++ +  + I     +   +L  LC +    +A +
Sbjct: 539 E----NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALI 594

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             + ++  +   + ++Y  +I  + + G++  A  ++  L+E+ I+P ++T+  +I G+C
Sbjct: 595 LLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYC 654

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE------------EGNIQRLL---A 434
           +   + +AR + + +K  G++P  +TYT  ++ + +            +G+ +  +    
Sbjct: 655 RVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASP 714

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
              EM+   I P  V YTV+I   CK   LQ+A+ L ++M   G+ PD +TY  ++ S C
Sbjct: 715 FWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCC 774

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
              D+ +A  L+N+M    +EP S   ++L  G+
Sbjct: 775 SRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGI 808



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 207/414 (50%), Gaps = 19/414 (4%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +IV+D LC+  ++++A+  L E  G+     VV    +++ YC  G    AK +F  M +
Sbjct: 406 NIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKE 465

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G+ PD  +YNIL+ G    G  +EALE  + +G  G++P++ T++ + +G  +  ++  
Sbjct: 466 RGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKE 525

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A   +  L     D  +  Y+ ++ GYC+     +  +L   +  QG  +   +   LLS
Sbjct: 526 AEAFLNTL----EDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLS 581

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           S+C  G  D+AL LL  M A+ ++P+ + Y  LI   C+   + +A  +++ +  + I+P
Sbjct: 582 SLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITP 641

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG-NIGEAVQL 365
           +   +  ++ G C    + EAR  F+ +       DV+ Y +++DG+ K+   +  ++Q 
Sbjct: 642 DVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQF 701

Query: 366 --------------YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
                         + ++ E  I P +V +  LI   CK   + DA  L D +   GL+P
Sbjct: 702 SKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQP 761

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             VTYT  +++ C  G++ R + L+ EM  K I P     +V+ +G+ K  K+Q
Sbjct: 762 DIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKVQ 815



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 163/366 (44%), Gaps = 57/366 (15%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDIKVSETPRN 62
           Y   G + DA  +  +MKE  ++  I TYN L+       +     +L D I       N
Sbjct: 447 YCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPN 506

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T++ +I+GLC   ++++A  FL     K     + + +A++  YCK  F   A  LF 
Sbjct: 507 SATHNRIIEGLCMAGKVKEAEAFLNTLEDK----CLENYSAMVDGYCKANFTRKAYELFS 562

Query: 123 LMLKYGL-----------------------------------HPDAFSYNILIHGLCIAG 147
            + K G+                                    P+   Y  LI   C  G
Sbjct: 563 RLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDG 622

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            M+ A    + +   G+ PD ITY+++  G+  ++ +  A  +   +  +G  PD++TYT
Sbjct: 623 DMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYT 682

Query: 208 VLICGYCQI------------GNVEEGLKLREV---MLSQGFKLNVIAYSVLLSSMCKSG 252
           V++ G+ ++            G+ EE +        M   G K +V+ Y+VL+ S CK+ 
Sbjct: 683 VVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTN 742

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            + +A+ L  EM A GL+PD+VTY+ L+   C +  + +AI L NEM  K I P+S A  
Sbjct: 743 NLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMS 802

Query: 313 AILLGL 318
            +  G+
Sbjct: 803 VLHRGI 808



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/221 (20%), Positives = 91/221 (41%), Gaps = 20/221 (9%)

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            + AY   G     +  L + + +   P  ++   ++  L +  K+  AV +   +  +G
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLG 222

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           + P+  TY   I++ C+  +  +A  +  +M    + P + T +  I+GLC +       
Sbjct: 223 LNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGY 282

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
             L +L+  N  +   AYT +I+  C+E  + +A   F  MV                  
Sbjct: 283 EALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMV------------------ 324

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
             + G  PD  I   ++ A+ + G+L     L   M+ +G+
Sbjct: 325 --NEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGI 363


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 152/588 (25%), Positives = 277/588 (47%), Gaps = 27/588 (4%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           +V   P  VY  ++V++   ++ ++       ++       P   +LN +++  C  G  
Sbjct: 108 QVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRF 167

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           E A+ +F  M   G  P+ FS+ IL+ G C AG    ALE  + MG  GV+P+ + Y+ L
Sbjct: 168 EDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTL 227

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQG 233
              F    +   A ++++++   G  PD+VT+   I   C  G + E  ++ R++ + + 
Sbjct: 228 ISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEE 287

Query: 234 FKL---NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
             L   N+  ++++L   CK G ++EA  L+  M+  G   +L +Y+I + GL +  K+ 
Sbjct: 288 LGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLL 347

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A     EM  K I PN ++   ++ GLC+  +I++ARM    +I S    D V Y+ ++
Sbjct: 348 EAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLL 407

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            G    G + +A  +  +++ +  SP+  T N L++   K G++ +A +LL  +     +
Sbjct: 408 HGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYD 467

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEM---ETKAIG--------------------PT 447
              VT    ++  C+ G +   + +++ M    + A+G                    P 
Sbjct: 468 LDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPD 527

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            +TY+++I GLCK  +L EA +   +M    + PD I Y+T I SFCK   +  AF++L 
Sbjct: 528 LITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLK 587

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M       +  TYN LI GL     +     LL  ++E  I+     Y  +I   C  G
Sbjct: 588 DMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGG 647

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
            +  A +   +M++KG   +I  +         ++ F   +E+ E+ L
Sbjct: 648 RIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIAL 695



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 155/590 (26%), Positives = 272/590 (46%), Gaps = 44/590 (7%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY--GLHPDAFSYNILIHGLCIAGSMEEALE 154
           S VSL A++    K G +++A   F           P  + YN+++        ++    
Sbjct: 78  SHVSLIALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSW 137

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
              DM   GV P+  T ++L  G     +   A +V  K+ +KG  P+  ++ +L+ GYC
Sbjct: 138 LYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYC 197

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           + G     L+L + M S G + N + Y+ L+SS C+ GR +EA  L+  M   GL PD+V
Sbjct: 198 RAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVV 257

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKR----ISPNSFAHGAILLGLCEKEMITEARMY 330
           T++  I  LC   K+ +A +++ +M          PN      +L G C++ M+ EA+  
Sbjct: 258 TFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTL 317

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            +S+  +  + ++  YNI + G V+ G + EA    +++++K I P+I +FN+++ G CK
Sbjct: 318 VESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCK 377

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           NG ++DAR ++  +   G+ P  VTY+T ++  C  G + +   +L EM  +   P   T
Sbjct: 378 NGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYT 437

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
             +++  L K+ ++ EA +LL+ M       D +T N +I   CK   L +A +++  MW
Sbjct: 438 CNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMW 497

Query: 511 LH------NLE-----------------PTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           +H      NL                  P   TY+I+I+GLC  G L  A    + +   
Sbjct: 498 IHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGK 557

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM--------- 598
           ++    + Y T I + C  G +  A      M ++G   S++ Y      +         
Sbjct: 558 SLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEI 617

Query: 599 ------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                 M   G  P+      M+    +GG +     L   M++ G+ P+
Sbjct: 618 YGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPN 667



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/590 (26%), Positives = 285/590 (48%), Gaps = 26/590 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y R G+   A+ ++  M    ++ +   YN+L+ +       +    L + ++      +
Sbjct: 196 YCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPD 255

Query: 63  VYTNSIVIDGLCQQSR-LQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAK 118
           V T +  I  LC   + L+ + +F      +E G   P++ + N ++  +CK G  E AK
Sbjct: 256 VVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAK 315

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M + G   +  SYNI + GL   G + EA     +M   G+EP+  +++ +  G 
Sbjct: 316 TLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGL 375

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                IS A  ++  ++  G  PD VTY+ L+ G C  G V +   +   M+ +G   N 
Sbjct: 376 CKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNT 435

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
              ++LL S+ K GRI EA  LL +M       D VT +I+I GLCK  K+ +A+++   
Sbjct: 436 YTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEG 495

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M         + HG+  LG      I    +   S     C+ D++ Y+I+I+G  K G 
Sbjct: 496 M---------WIHGSAALGNLGNSFIG---LVDSSSNGKKCLPDLITYSIIINGLCKAGR 543

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EA + + +++ K + P  + +++ I+ FCK+GK++ A R+L  ++  G   S  TY +
Sbjct: 544 LDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNS 603

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +     +  I  +  LL +M+ K I P   TY  +I  LC+  ++++A  LL++M   G
Sbjct: 604 LILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKG 663

Query: 479 VTPDQITYNTIIRSFCKCKD---LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
           ++P+  ++  +I++FCK  D   +++ F++   +  H      A Y+++ + L + G++ 
Sbjct: 664 ISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGH----KEALYSLMFNELLIGGEVS 719

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            A  L  +  +    L    Y  +I+  C +  +  A     +M++KG+ 
Sbjct: 720 EAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYR 769



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 147/324 (45%), Gaps = 19/324 (5%)

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           V LYN++++  ++   +     LY+ ++   +SP   T N LI G C +G+  DAR + D
Sbjct: 116 VYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFD 175

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            + + G  P+  ++   +  YC  G   R L LL  M +  + P  V Y  +I   C++ 
Sbjct: 176 KMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREG 235

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN----LEPTS 518
           + +EA +L+E M   G+ PD +T+N+ I + C    + +A ++   M +        P  
Sbjct: 236 RNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNI 295

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            T+N++++G C  G L+ A  L+ S++ +   +   +Y   +      G + +A     +
Sbjct: 296 TTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKE 355

Query: 579 MVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           MV+KG E +I  +                +    +M+S+G  PD      +L      G 
Sbjct: 356 MVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGK 415

Query: 624 LGSVFELAAVMIKSGLLPDKFLIN 647
           +     +   M++ G  P+ +  N
Sbjct: 416 VLKANNILHEMMRRGCSPNTYTCN 439



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/447 (22%), Positives = 192/447 (42%), Gaps = 76/447 (17%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN-------LRHTDIMWDLYDDIKVSETP 60
           + G++ DA  ++  M    +     TY++LL+        L+  +I   L++ ++   +P
Sbjct: 377 KNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNI---LHEMMRRGCSP 433

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N YT +I++  L ++ R+ +A   LQ+   + +    V+ N ++   CK G  + A  +
Sbjct: 434 -NTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEI 492

Query: 121 FCLMLKYGLH-----------------------PDAFSYNILIHGLCIAGSMEEALEFTN 157
              M  +G                         PD  +Y+I+I+GLC AG ++EA +   
Sbjct: 493 VEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFI 552

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           +M    + PD+I Y      F    +IS A++V++ +  +G +  + TY  LI G     
Sbjct: 553 EMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKN 612

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            + E   L + M  +G   N+  Y+ ++S +C+ GRI +A  LL EM   G+ P++ ++ 
Sbjct: 613 QIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFR 672

Query: 278 ILIRGLCKQD----------------------------------KVHKAIQLYNEMCSKR 303
           +LI+  CK                                    +V +A +L++    + 
Sbjct: 673 LLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRC 732

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
               +F +  ++  LC+ EM+  A      +I      D   +  +IDG  K G   +A 
Sbjct: 733 FDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDAD 792

Query: 364 QLYRQ--------LIEKRISPSIVTFN 382
           +L  +        ++E +I+ +   FN
Sbjct: 793 ELAERMMDMASEGMVENKITRNESAFN 819


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 248/502 (49%), Gaps = 4/502 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y   G   DA  ++ +++E     S+ ++NS+L  L   R  D    L++ +K    P N
Sbjct: 63  YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP-N 121

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T +I+ID LC   R+++A   L E       P+++++N ++ R CK    E A  +F 
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
              + G +PD  +Y  LI GL   G ++EA      M   G   + + Y+ L + F +  
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 241

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +     K+ ++L+ +G  PD+      +    + G VE+G  + E + S GF  +V +YS
Sbjct: 242 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 301

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L+  + K+G+  E   + + M+  G   D   Y+ ++ G CK  KVHKA ++  EM  K
Sbjct: 302 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 361

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P    +GAI+ GL + + + EA M F+         +VVLY+ +IDG+ K+G I EA
Sbjct: 362 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 421

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +  ++++K ++P++ T+NSL+    K  ++ +A     ++K     P+  TY+  +N 
Sbjct: 422 YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILING 481

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C      +     Q+M+ + + P  VTYT +I GL K   + +A  L E     G  PD
Sbjct: 482 LCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPD 541

Query: 483 QITYNTIIRSFCKCKDLRKAFQ 504
             ++N +I          +A+Q
Sbjct: 542 AASFNALIEGMSNANRAMEAYQ 563



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 258/547 (47%), Gaps = 41/547 (7%)

Query: 21  KMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNV---YTNSIVIDGLCQQS 77
           ++K   LK    +Y S+++ L     + +  +     E  R+V   Y  + +I G     
Sbjct: 8   ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 67

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           R +DA   L+    +   PSVVS N+I++   K    + A  LF +M K    P++ +YN
Sbjct: 68  RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYN 126

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           I+I  LC+ G +EEA    ++M    + P+ +T +I+        ++  A+K+ +    +
Sbjct: 127 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 186

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G +PD VTY  LI G  + G V+E  +L E ML  G   N + Y+ L+ +    GR ++ 
Sbjct: 187 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 246

Query: 258 LGLLYEMEAVGLKPDLV-----------------------------------TYSILIRG 282
             +  E+   G KPDL                                    +YSILI G
Sbjct: 247 HKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHG 306

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           L K  +  +   +++ M  +  + ++ A+ A++ G C+   + +A    + +    C+Q 
Sbjct: 307 LTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM-KEKCVQP 365

Query: 343 -VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
            V  Y  ++DG  K+  + EA  L+ +   K I  ++V ++SLI GF K G++ +A  +L
Sbjct: 366 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 425

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           + +   GL P+  T+ + ++A  +   I   L   Q M+     P   TY+++I GLC+ 
Sbjct: 426 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 485

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            K  +A    +DM   G+ P+ +TY T+I    K  ++  A+ L  +   +   P +A++
Sbjct: 486 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASF 545

Query: 522 NILIDGL 528
           N LI+G+
Sbjct: 546 NALIEGM 552



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 231/500 (46%), Gaps = 36/500 (7%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           GL PD  SY  +I  LC AG + EA E    M      P A  Y+ +  G+    +   A
Sbjct: 13  GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 72

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           +K++++L  +G  P +V++  ++    +   V+E L L EVM  +  + N   Y++++  
Sbjct: 73  YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDM 131

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C  GR++EA  +L EME   L P+L+T +I++  LCK  K+ +A +++     +  +P+
Sbjct: 132 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 191

Query: 308 SFAHGAILLGLCEKEMITEA-RMY----------------------------------FD 332
              + +++ GL +K  + EA R++                                  F 
Sbjct: 192 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFK 251

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            LI   C  D+ L N  +D   K G + +   ++  +      P + +++ LI+G  K G
Sbjct: 252 ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAG 311

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           +  +   +   +K  G    A  Y   ++ +C+ G + +   +L+EM+ K + PT  TY 
Sbjct: 312 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 371

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            ++ GL K  +L EA  L E+    G+  + + Y+++I  F K   + +A+ +L +M   
Sbjct: 372 AIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK 431

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            L P   T+N L+D L    ++  A     S++E         Y+ +I   C     +KA
Sbjct: 432 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKA 491

Query: 573 MTFFCQMVEKGFEISIRDYT 592
             F+  M ++G   ++  YT
Sbjct: 492 FVFWQDMQKQGLVPNVVTYT 511


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 209/406 (51%), Gaps = 3/406 (0%)

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P   S N L+ GL  A  ++ A +      R  V PD  T++ +  G   + Q+  A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQ---IGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           V + +   G  P + TY  LI GYC+    GN+     L + M+  G     + + VL++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             CK+     A+ +  EM+  G+   +VTY+ LI GLC + KV + ++L  EM    +SP
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N    G +L G C+K M+ +A  + D +   N   DVV+YNI+ID Y +LG + +A+ + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             + +K ISP++ T+N LI GF ++G    A  LLD +K  G+E   VTY   + A C +
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +++ + LL EM    + P H+TY  +I+G C +  ++ A ++   M       + +TY
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           N  I+ FC+   + +A  LLN+M    L P   TY  + +G+   G
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 207/441 (46%), Gaps = 9/441 (2%)

Query: 181 LSQISGAWKVIQKLLIKGSD-----PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
           L++ S   +     L+ G       P   +   L+ G      V+   K     L +   
Sbjct: 129 LARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVS 188

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD---KVHKA 292
            ++  ++ ++S +C+ G++ +A  +  +++A GL P + TY+ LI G CK+     ++  
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
             L  EM    ISP +   G ++ G C+      A   F+ +        VV YN +I G
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
               G + E V+L  ++ +  +SP+ +TF  ++ GFCK G +ADA   +D +    +EP 
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            V Y   ++ Y   G ++  +A+ + M  K I P   TY  +I G  +    + A  LL+
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +M   G+  D +TYN +I + C   ++RKA +LL++M    LEP   TYN +I G C  G
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           ++K+A  +   +++       V Y   IK  C  G + +A     +M++K    +   Y 
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITY- 547

Query: 593 KSFFCMMLSNGFPPDQEICEV 613
           ++    M+  G+ PD   C V
Sbjct: 548 ETIKEGMMEKGYTPDIRGCTV 568



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 185/355 (52%), Gaps = 7/355 (1%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQS---RLQDAILFLQETAGKEFGPSVVSLNAIM 105
           D+  DIK      +V T + +IDG C++     +    + L+E       P+ V+   ++
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 106 SRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE 165
           + YCK      A  +F  M + G+     +YN LI GLC  G +EE ++   +M   G+ 
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           P+ IT+  + KGF     ++ A   I  +  +  +PD+V Y +LI  Y ++G +E+ + +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
           +E M  +G   NV  Y+ L++   +SG    A GLL EM+  G++ D+VTY++LI  LC 
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ--DV 343
           + +V KA++L +EM    + PN   +  I+ G C+K  I  A  Y     M  C +  +V
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSA--YEIRTRMEKCRKRANV 509

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           V YN+ I  + ++G + EA  L  ++++K + P+ +T+ ++  G  + G   D R
Sbjct: 510 VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIR 564



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 142/327 (43%), Gaps = 40/327 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y +      AV V  +MK+  +  S+ TYNSL                            
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSL---------------------------- 305

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
               I GLC + ++++ +  ++E       P+ ++   ++  +CK G    A      M 
Sbjct: 306 ----ISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           +  + PD   YNILI      G ME+A+     M + G+ P+  TY+ L  GF      S
Sbjct: 362 ERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR----S 417

Query: 186 GAWKVIQKLLI----KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           G W+    LL     KG + D+VTY VLI   C  G V + +KL + M   G + N + Y
Sbjct: 418 GDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTY 477

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++   C  G I  A  +   ME    + ++VTY++ I+  C+  K+ +A  L NEM  
Sbjct: 478 NTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537

Query: 302 KRISPNSFAHGAILLGLCEKEMITEAR 328
           K + PN   +  I  G+ EK    + R
Sbjct: 538 KCLVPNGITYETIKEGMMEKGYTPDIR 564



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 124/293 (42%), Gaps = 18/293 (6%)

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
           R  PS  + N+L+ G     +V  A +   +     + P   T+ T ++  C  G +++ 
Sbjct: 151 RHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKA 210

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQ---WKLQEAVQLLEDMYVIGVTPDQITYNTI 489
             + ++++   + P+  TY  +I G CK+     +     LL++M   G++P  +T+  +
Sbjct: 211 GDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I  +CK  +   A ++  +M    +  +  TYN LI GLC  G ++    L+  +++  +
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI----------RDYTKSFFCM- 598
           S  ++ +  ++K  C +G +  A  +   M E+  E  +          R   K    M 
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390

Query: 599 ----MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               M   G  P+      ++  F + GD  S   L   M + G+  D    N
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYN 443



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 23/209 (11%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMW----DLYDDIKVSET 59
           VY R G + DA+ V   M +  +  ++ TYN L+    R  D  W     L D++K    
Sbjct: 378 VYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD--WRSASGLLDEMKEKGI 435

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             +V T +++I  LC +  ++ A+  L E +     P+ ++ N I+  +C  G  + A  
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   M K     +  +YN+ I   C  G M+EA +  N+M    + P+ ITY  + +G  
Sbjct: 496 IRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG-- 553

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
                         ++ KG  PDI   TV
Sbjct: 554 --------------MMEKGYTPDIRGCTV 568


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 149/551 (27%), Positives = 260/551 (47%), Gaps = 27/551 (4%)

Query: 96  PSVVSLNAIMS---RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           P++++LN ++    RY       ++K +F  ++K G+  +  ++NILI G CI   + EA
Sbjct: 8   PNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEA 67

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           +     M      PD ++Y+ +        +++ A  ++  +   G  P+  T+ +L+ G
Sbjct: 68  IGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSG 127

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           YC++G ++E  ++ ++M       +V  Y+ L+  +CK G+IDEA  L  EME + L P 
Sbjct: 128 YCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPH 187

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY++LI G  +     K  +L +EM  K + PN+  +  ++    ++  +  A     
Sbjct: 188 VVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELR 247

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +  S    D V +N + +GY K G + EA ++  ++  K +  + VT N++++  C   
Sbjct: 248 KMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGER 307

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           K+ DA +LL +    G     V+Y T +  Y + G          EM+ K I P+ +TY 
Sbjct: 308 KLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS----XXWDEMKEKEIIPSIITYG 363

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I GLC+  K  +++    ++   G+ PDQ TYNTII  +C+   + KAF   N+M   
Sbjct: 364 TMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKK 423

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
           + +P   T NIL+ GLC  G L  A  L  +      ++  V + TII   C EG   +A
Sbjct: 424 SFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEA 483

Query: 573 MTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
                +M EK                       PD      +L A    G +    E  +
Sbjct: 484 FDLLAEMEEK--------------------KLGPDCYTHNAILSALADAGRMKEAEEFMS 523

Query: 633 VMIKSGLLPDK 643
            +++ G L D+
Sbjct: 524 GIVEQGKLQDQ 534



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 242/538 (44%), Gaps = 52/538 (9%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P NV  N+I +D LC++ +L +A   L +       P+  + N ++S YCKLG+ + A  
Sbjct: 81  PDNVSYNTI-LDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAE 139

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA--------------------------- 152
           +  +M +  + PD  +Y  LI GLC  G ++EA                           
Sbjct: 140 VIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCF 199

Query: 153 --------LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
                    E  ++M   GV+P+A+TY+++ K +    ++  A   ++K+   G  PD V
Sbjct: 200 ECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCV 259

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           T+  L  GYC+ G + E  ++ + M  +G K+N +  + +L ++C   ++D+A  LL   
Sbjct: 260 TFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSA 319

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              G   D V+Y  LI G  K  K       ++EM  K I P+   +G ++ GLC     
Sbjct: 320 SKRGYFVDEVSYGTLIMGYFKVGKS----XXWDEMKEKEIIPSIITYGTMIGGLCRSGKT 375

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            ++    + L+ S  + D   YN +I GY + G + +A     ++++K   P + T N L
Sbjct: 376 DQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNIL 435

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           + G C  G +  A +L  T    G    AVT+ T ++  CEEG  +    LL EME K +
Sbjct: 436 VRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKL 495

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
           GP   T+  ++  L    +++EA + +  +   G   DQ               L K   
Sbjct: 496 GPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTI------------SLNKRKT 543

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
             +       +P S  ++  I+ LC  G  K+A  ++    +  I L K  Y ++++ 
Sbjct: 544 ESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEG 601



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 227/484 (46%), Gaps = 34/484 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G + +A  VI  M   ++   ++TY +L+  L      D  + L D+++  +   +
Sbjct: 128 YCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPH 187

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T +++I+G  + S        + E  GK   P+ V+ N ++  Y K G  + A     
Sbjct: 188 VVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELR 247

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M + G  PD  ++N L +G C AG + EA    ++M R G++ +++T + +        
Sbjct: 248 KMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGER 307

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE--EGLKLREVMLSQGFKLNVIA 240
           ++  A+K++     +G   D V+Y  LI GY ++G     + +K +E++ S      +I 
Sbjct: 308 KLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPS------IIT 361

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y  ++  +C+SG+ D+++    E+   GL PD  TY+ +I G C++ +V KA    N+M 
Sbjct: 362 YGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMV 421

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K   P+ F    ++ GLC + M+ +A   F + I      D V +N +I G  + G   
Sbjct: 422 KKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFE 481

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG------------ 408
           EA  L  ++ EK++ P   T N+++      G++ +A   +  I   G            
Sbjct: 482 EAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKR 541

Query: 409 -----------LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
                       +P++V ++  +N  C +G  +  + ++QE   K I     TY  +++G
Sbjct: 542 KTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEG 601

Query: 458 LCKQ 461
           L K+
Sbjct: 602 LIKR 605



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 222/492 (45%), Gaps = 27/492 (5%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAW--KVIQKLLIK-GSDPDIVTYTVLICGYCQ 215
           M R  ++P+ +T + L K           +  K I   +IK G + +  T+ +LICG C 
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              + E + L   M       + ++Y+ +L  +CK G+++EA  LL +M+  GL P+  T
Sbjct: 61  ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++IL+ G CK   + +A ++ + M    + P+   +  ++ GLC+   I EA    D + 
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
               +  VV YN++I+G  +  +  +  +L  ++  K + P+ VT+N ++  + K GK+ 
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMD 240

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A   L  ++  G  P  VT+ T  N YC+ G +     ++ EM  K +    VT   ++
Sbjct: 241 NAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTIL 300

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             LC + KL +A +LL      G   D+++Y T+I  + K           ++M    + 
Sbjct: 301 HTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVG----KSXXWDEMKEKEII 356

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P+  TY  +I GLC +G    +      L E  +   +  Y TII  +C EG V KA  F
Sbjct: 357 PSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHF 416

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
             +MV+K F+                    PD   C +++      G L    +L    I
Sbjct: 417 RNKMVKKSFK--------------------PDLFTCNILVRGLCTEGMLDKALKLFKTWI 456

Query: 636 KSGLLPDKFLIN 647
             G   D    N
Sbjct: 457 SKGKAIDAVTFN 468


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 246/517 (47%), Gaps = 4/517 (0%)

Query: 74  CQQSRLQ---DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM-LKYGL 129
           C+  +L+   +A+ F    A     PSV+    ++    K+     A  L   M    G+
Sbjct: 48  CKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGI 107

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            PD F  N++I+ LC    +         M + G+EP  +T++IL  G  +   +  A +
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVE 167

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           ++  +   G   D+ TY VLI G C++G   E +     M  + +  NV+ YS ++  +C
Sbjct: 168 LVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLC 227

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K G + EALGL  EM   G+KP+LVTY+ LI+GLC   +  +A  L +EM    + P+  
Sbjct: 228 KDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQ 287

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
           +   ++  LC++  I +A+     +I+   + DV  YN +ID Y     + EA +++  +
Sbjct: 288 SLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELM 347

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           + +   P IV + SLI+G+CK   +  A  LLD +   G  P  VT+TT +  +C+ G  
Sbjct: 348 VSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRP 407

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
                L   M      P   T  +++ GLCK   L EA+ L   M    +  + + Y+ I
Sbjct: 408 LAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSII 467

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           +   C    L  A +L + +    L+     Y I+I+G    G L  A+ LL +++E+  
Sbjct: 468 LDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGC 527

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
                 Y   ++   AE ++ +++ +   M +KGF +
Sbjct: 528 MPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSV 564



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 233/465 (50%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P    LN +++  C L        +   MLK GL P   ++ ILI+GLC+ G +  A+E 
Sbjct: 109 PDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVEL 168

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + + + G   D  TY +L  G   + + S A   ++K+  +  +P++V Y+ ++ G C+
Sbjct: 169 VDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCK 228

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G V E L L   M  +G K N++ Y+ L+  +C  GR  EA  LL EM  +G+ PDL +
Sbjct: 229 DGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQS 288

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
            +IL+  LCK+ K+ +A  +   M      P+ F + +++   C +  + EA   F+ ++
Sbjct: 289 LNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMV 348

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C+ D+V Y  +I G+ K+ NI +A+ L  ++I+   +P +VT+ +LI GFC+ G+  
Sbjct: 349 SRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPL 408

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A+ L   +  +G  P+  T    ++  C+   +   L+L   ME   +    V Y++++
Sbjct: 409 AAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIIL 468

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G+C   KL  A++L   +   G+  +   Y  +I  F K   L KA  LL+ M  +   
Sbjct: 469 DGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCM 528

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           P S TYN+ + GL    ++  +   L  +++   S+       II
Sbjct: 529 PDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMII 573



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 247/520 (47%), Gaps = 30/520 (5%)

Query: 130 HPDAFSYNILIHGLCIAG---SMEEALEFTNDMGRHGVEPDAITYSIL----AKGFHLLS 182
           H +   +   +   C +G   S++EAL F + M +    P  I +++L     K  H  +
Sbjct: 34  HSNKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTT 93

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            IS   ++   L IK   PD     V+I   C +  V  G  +   ML  G + +V+ ++
Sbjct: 94  AISLVKEMHSSLGIK---PDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFT 150

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L++ +C  G +  A+ L+  +E  G + D+ TY +LI GLCK  K  +A+    +M  +
Sbjct: 151 ILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEER 210

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             +PN   +  ++ GLC+  +++EA      +       ++V Y  +I G    G   EA
Sbjct: 211 NWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEA 270

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L  ++++  + P + + N L+   CK GK+  A+ ++  + L G  P   TY + ++ 
Sbjct: 271 GSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDR 330

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC +  +     + + M ++   P  V YT +I G CK   + +A+ LL++M  +G TPD
Sbjct: 331 YCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPD 390

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +T+ T+I  FC+      A +L   M  +   P   T  I++DGLC +  L  A  L  
Sbjct: 391 VVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFH 450

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
           ++++ N+ L  V Y+ I+   C+ G ++ A+  F  +  KG +I++  YT          
Sbjct: 451 AMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYT---------- 500

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                     +M+  F + G L    +L + M ++G +PD
Sbjct: 501 ----------IMINGFAKQGLLDKAEDLLSNMEENGCMPD 530



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 228/444 (51%), Gaps = 3/444 (0%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           V+  M +L L+ S+ T+  L+  L    D+    +L D ++ +    +V T  ++I+GLC
Sbjct: 133 VLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLC 192

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +  +  +A+ +L++   + + P+VV  + +M   CK G    A GL   M   G+ P+  
Sbjct: 193 KMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLV 252

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +Y  LI GLC  G  +EA    ++M + GV PD  + +IL        +I  A  VI  +
Sbjct: 253 TYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFM 312

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           ++ G  PD+ TY  LI  YC    ++E  ++ E+M+S+G   +++AY+ L+   CK   I
Sbjct: 313 ILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNI 372

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           ++A+ LL EM  VG  PD+VT++ LI G C+  +   A +L+  M      PN      I
Sbjct: 373 NKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAII 432

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           L GLC+ ++++EA   F ++  SN   ++V+Y+I++DG    G +  A++L+  L  K +
Sbjct: 433 LDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGL 492

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
             ++  +  +I GF K G +  A  LL  ++ +G  P + TY  F+     E  I R + 
Sbjct: 493 QINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIK 552

Query: 435 LLQEMETKAIGPTHVTYTVVIKGL 458
            L  M  K       T  ++I  L
Sbjct: 553 YLTMMRDKGFSVDATTTEMIINYL 576



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/517 (25%), Positives = 240/517 (46%), Gaps = 2/517 (0%)

Query: 19  IAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR-NVYTNSIVIDGLCQQS 77
           +AKM  L   +        +  ++H      L  ++  S   + + +  ++VI+ LC   
Sbjct: 66  MAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLK 125

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
            +      L         PSVV+   +++  C  G    A  L   + K G   D  +Y 
Sbjct: 126 LVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYG 185

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           +LI+GLC  G   EA+ +   M      P+ + YS +  G      +S A  +  ++  K
Sbjct: 186 VLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGK 245

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  P++VTYT LI G C  G  +E   L + M+  G   ++ + ++L+  +CK G+I +A
Sbjct: 246 GIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQA 305

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             ++  M  VG  PD+ TY+ LI   C Q+++ +A +++  M S+   P+  A+ +++ G
Sbjct: 306 KSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHG 365

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
            C+ + I +A    D +I      DVV +  +I G+ ++G    A +L+  + +    P+
Sbjct: 366 WCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPN 425

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           + T   ++ G CK+  +++A  L   ++   L+ + V Y+  ++  C  G +   L L  
Sbjct: 426 LQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFS 485

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            +  K +      YT++I G  KQ  L +A  LL +M   G  PD  TYN  ++     +
Sbjct: 486 CLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAER 545

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN-GD 533
           ++ ++ + L  M        + T  ++I+ L  N GD
Sbjct: 546 EIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQGD 582



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 179/394 (45%), Gaps = 32/394 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + G+V +A+ +  +M    +K ++ TY  L                              
Sbjct: 228 KDGLVSEALGLCLEMSGKGIKPNLVTYTCL------------------------------ 257

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
             I GLC   R ++A   L E       P + SLN ++   CK G    AK +   M+  
Sbjct: 258 --IQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILV 315

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  PD F+YN LI   C+   M+EA      M   G  PD + Y+ L  G+  +  I+ A
Sbjct: 316 GEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKA 375

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             ++ +++  G  PD+VT+T LI G+CQ+G      +L   M   G   N+   +++L  
Sbjct: 376 MHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDG 435

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CKS  + EAL L + ME   L  ++V YSI++ G+C   K++ A++L++ + +K +  N
Sbjct: 436 LCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQIN 495

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
            +A+  ++ G  ++ ++ +A     ++  + C+ D   YN+ + G V    I  +++   
Sbjct: 496 VYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLT 555

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
            + +K  S    T   +I     N    + R  L
Sbjct: 556 MMRDKGFSVDATTTEMIINYLSTNQGDNELREFL 589


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 227/445 (51%), Gaps = 1/445 (0%)

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           L++  C AG   E+L F   M   G  PD I  + L KGF     I  A +V++ +L + 
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVME-ILERY 133

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD+  Y  LI G+ +   +E   ++ + M S+GF  +V+ Y++++ S C  G++D AL
Sbjct: 134 GKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +  E+     +P ++TY+ILI        +  A++L +EM SK + P++  + AI+ G+
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++ M+ +A     SL    C  D++ YNI++   +  G   E  +L  ++I     P++
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VT + LI   C++GKV +A  LL ++K  GL+P A  Y   +  +C EG +      L+ 
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M +    P  V Y  ++ GLC+  K  +A+++ E +  +G  P+  +YNT+  +     D
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
             +A +++ ++    ++P   TYN LI  LC +G +  A  LLV +Q        V+Y  
Sbjct: 434 RYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNI 493

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKG 583
           I+   C     + A+     M EKG
Sbjct: 494 ILLGLCKVNRANDAIEVLAAMTEKG 518



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 247/502 (49%), Gaps = 3/502 (0%)

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           C+  +  +++ FL+    K + P V+    ++  +        A  +  ++ +YG  PD 
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDV 138

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
           F+YN LI G   A  +E A    + M   G  PD +TY+I+   F    ++  A ++ ++
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           LL    +P ++TYT+LI      G ++  +KL + MLS+G + + + Y+ ++  MCK   
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +D+A  LL  + + G KPD++TY+IL+R L  + K  +  +L +EM S    PN   H  
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSI 318

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++  LC    + EA     S+       D   Y+ +I G+ + G +  A +    +I   
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
             P IV +N+++ G C+ GK   A  + + +   G  P+  +Y T  +A    G+  R L
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRAL 438

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            ++ ++  + I P  +TY  +I  LC+   + EA++LL DM      P+ ++YN I+   
Sbjct: 439 EMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGL 498

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           CK      A ++L  M     +P   TY +LI+G+  +G    A  L  SL   N ++++
Sbjct: 499 CKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMN-AISE 557

Query: 554 VAYTTIIKAHCAEGDVHKAMTF 575
            ++  + K      DV+K +TF
Sbjct: 558 DSFNRLNKTF-PLLDVYKDLTF 578



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 220/432 (50%), Gaps = 1/432 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+  + +I G  + ++L++A   L     + F P VV+ N ++  +C  G  ++A  +F
Sbjct: 137 DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIF 196

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +LK    P   +Y ILI    + G ++ A++  ++M   G+EPD +TY+ + +G    
Sbjct: 197 EELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKE 256

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A+++++ L  +G  PDI+TY +L+      G   EG KL   M+S G K NV+ +
Sbjct: 257 MMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTH 316

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S+L+ ++C+ G+++EA+ LL  M+  GLKPD   Y  LI G C++ ++  A +    M S
Sbjct: 317 SILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMIS 376

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               P+   +  I+ GLC      +A   F+ L    C  +V  YN +       G+   
Sbjct: 377 DGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYR 436

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+++  +L+ + I P  +T+NSLI   C++G V +A  LL  ++     P+ V+Y   + 
Sbjct: 437 ALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILL 496

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+       + +L  M  K   P   TY ++I+G+       EA++L   ++ +    
Sbjct: 497 GLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAIS 556

Query: 482 DQITYNTIIRSF 493
           +  ++N + ++F
Sbjct: 557 ED-SFNRLNKTF 567



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 199/445 (44%), Gaps = 16/445 (3%)

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+ G   E L   E M+ +G+  +VI  + L+     S  I +A  ++  +E  G KPD+
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDV 138

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
             Y+ LI G  K +++  A ++ + M S+   P+   +  ++   C +  +  A   F+ 
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L+  NC   V+ Y I+I+  +  G I  A++L  +++ K + P  +T+N++I G CK   
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V  A  LL ++   G +P  +TY   +      G       L+ EM +    P  VT+++
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSI 318

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I  LC+  K++EAV LL  M   G+ PD   Y+ +I  FC+   L  A + L  M    
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
             P    YN ++ GLC  G    A  +   L E        +Y T+  A  + GD ++A+
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRAL 438

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAF 618
               +++ +G +     Y     C+               M S  + P+     ++L+  
Sbjct: 439 EMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGL 498

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDK 643
            +        E+ A M + G  P++
Sbjct: 499 CKVNRANDAIEVLAAMTEKGCQPNE 523



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 187/404 (46%), Gaps = 21/404 (5%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           LL+  C++G+ +E+L  L  M   G  PD++  + LI+G      + KA ++  E+  + 
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EILERY 133

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+ FA+ A++ G  +   +  A    D +     + DVV YNIMI  +   G +  A+
Sbjct: 134 GKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +++ +L++    P+++T+  LI     +G +  A +LLD +   GLEP  +TY   +   
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+E  + +   LL+ + ++   P  +TY ++++ L  + K  E  +L+ +M  IG  P+ 
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +T++ +I + C+   + +A  LL  M    L+P +  Y+ LI G C  G L  A   L  
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           +         V Y TI+   C  G   +A+  F    EK  E+                G
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVF----EKLDEV----------------G 413

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            PP+      +  A    GD     E+   ++  G+ PD+   N
Sbjct: 414 CPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYN 457



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 204/417 (48%), Gaps = 7/417 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + +   + +A  V+ +MK       + TYN ++ +       D+  ++++++        
Sbjct: 148 FIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPT 207

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T +I+I+       +  A+  L E   K   P  ++ NAI+   CK    + A  L  
Sbjct: 208 VITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLR 267

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   G  PD  +YNIL+  L   G   E  +  ++M   G +P+ +T+SIL        
Sbjct: 268 SLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDG 327

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A  +++ +  KG  PD   Y  LI G+C+ G ++   +  E M+S G   +++ Y+
Sbjct: 328 KVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYN 387

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +++ +C++G+ D+AL +  +++ VG  P++ +Y+ L   L      ++A+++  ++ ++
Sbjct: 388 TIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQ 447

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I P+   + +++  LC   M+ EA      +       +VV YNI++ G  K+    +A
Sbjct: 448 GIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDA 507

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           +++   + EK   P+  T+  LI G   +G  A+A  L ++  LHG+  +A++  +F
Sbjct: 508 IEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANS--LHGM--NAISEDSF 560


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 250/504 (49%), Gaps = 18/504 (3%)

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH-PDAFSYNILIHGLCIAGSMEEA 152
           F     SL A +SR+     A +A  LF  M ++    P A +YN +I  LC    +  A
Sbjct: 116 FDRPFASLLAHLSRF---ALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARA 172

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           L + + M R G  PDA T++ L  G+   +Q+  A  +  K+ ++G   D+V+Y  LI G
Sbjct: 173 LRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEG 232

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            C+ G ++E ++L   M      +    Y+ L+  +C + R +E L +L  M+ +G +P 
Sbjct: 233 LCEAGRIDEAVELFGEMDQPDMHM----YAALVKGLCNAERGEEGLLMLRRMKELGWRPS 288

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
              Y+ ++   C++ K  +A ++  EM  K ++P      A++   C++  +++A    +
Sbjct: 289 TRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLE 348

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            + +  C  +V  YN ++ G+   G + +A+ L  ++    ++P  VT+N LI G C +G
Sbjct: 349 LMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDG 408

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
            +  A RLL  ++  GL     TY   +NA C++G   +  +L   +ET+ I P  VT+ 
Sbjct: 409 HIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFN 468

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I GLCK  K   A + LE M   G TPD  TY++ I   CK K  ++    + +M   
Sbjct: 469 SLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 528

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVS-----LQEHNISLTKVAYTTIIKAHCAEG 567
           +++P++  Y I+I  L     LK  +  LV+     +     +   V YTT ++A+C EG
Sbjct: 529 DVKPSTVNYTIVIHKL-----LKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEG 583

Query: 568 DVHKAMTFFCQMVEKGFEISIRDY 591
            +++A     +M + G  +    Y
Sbjct: 584 RLNEAENVLMEMSKNGVTVDTMAY 607



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/570 (27%), Positives = 266/570 (46%), Gaps = 7/570 (1%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + VI  LC+++ L  A+ +L       + P   + N+++  YC+    +VA+ LF  M
Sbjct: 155 TYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 214

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G   D  SY  LI GLC AG ++EA+E   +M     +PD   Y+ L KG     + 
Sbjct: 215 PLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERG 270

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
                +++++   G  P    Y  ++   C+    +E  ++ + M  +G    V+  + +
Sbjct: 271 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAV 330

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +++ CK GR+ +AL +L  M+  G KP++ TY+ L++G C + KVHKA+ L N+M +  +
Sbjct: 331 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGV 390

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +P++  +  ++ G C    I  A      +     I D   YN +I+   K G   +A  
Sbjct: 391 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 450

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+  L  + I P+ VTFNSLI G CK+GK   A + L+ +   G  P   TY++F+   C
Sbjct: 451 LFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 510

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +    Q  L+ + EM  K + P+ V YT+VI  L K+       +   +M   G  PD +
Sbjct: 511 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVV 570

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TY T +R++C    L +A  +L +M  + +   +  YN L+DG    G   +A  +L  +
Sbjct: 571 TYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQM 630

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
                   +  Y  +++       V   +      V K  E++        F +M  N F
Sbjct: 631 TSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTD---VFGLFDVMKKNEF 687

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
            P+      +L  F + G       L ++M
Sbjct: 688 LPNSGTYSSILEGFSEDGRTEEATSLVSLM 717



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 145/586 (24%), Positives = 278/586 (47%), Gaps = 19/586 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y RT  V  A  +  KM        + +Y +L+  L     + +  +     + P +++ 
Sbjct: 198 YCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQP-DMHM 256

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + ++ GLC   R ++ +L L+      + PS  +  A++   C+   A+ A+ +   M 
Sbjct: 257 YAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMF 316

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + GL P   +   +I+  C  G M +AL     M   G +P+  TY+ L +GF    ++ 
Sbjct: 317 EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH 376

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  ++ K+   G +PD VTY +LI G C  G++E   +L  +M   G   +   Y+ L+
Sbjct: 377 KAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 436

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           +++CK GR D+A  L   +E  G+KP+ VT++ LI GLCK  K   A +   +M S   +
Sbjct: 437 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCT 496

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+++ + + +  LC+ +   E   +   ++  +     V Y I+I   +K  N G   + 
Sbjct: 497 PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVART 556

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           + +++    +P +VT+ + +  +C  G++ +A  +L  +  +G+    + Y T M+ +  
Sbjct: 557 WGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHAS 616

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G     +++L++M + A  P   TY ++++ L +       ++L+ED  V+ +TP  + 
Sbjct: 617 IGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVR-------MRLVED--VLPLTPAGV- 666

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
                    K  +L   F L + M  +   P S TY+ +++G   +G  + A  L+  ++
Sbjct: 667 --------WKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK 718

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           E +ISL +  YT ++   C       A    C M++ GF   +  Y
Sbjct: 719 EDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSY 764



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/548 (23%), Positives = 239/548 (43%), Gaps = 54/548 (9%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + V+D  C++ + ++A   LQE   K   P VV+  A+++ YCK G    A  +  LM  
Sbjct: 293 AAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKL 352

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  P+ ++YN L+ G C  G + +A+   N M   GV PDA+TY++L +G  +   I  
Sbjct: 353 RGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIES 412

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A+++++ +   G   D  TY  LI   C+ G  ++   L + + ++G K N + ++ L++
Sbjct: 413 AFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLIN 472

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CKSG+ D A   L +M + G  PD  TYS  I  LCK     + +    EM  K + P
Sbjct: 473 GLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 532

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY-------------------- 346
           ++  +  ++  L ++         +  ++ S C  DVV Y                    
Sbjct: 533 STVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVL 592

Query: 347 ---------------NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY----- 386
                          N ++DG+  +G    AV + +Q+      P+  T+  L+      
Sbjct: 593 MEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRM 652

Query: 387 ------------GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
                       G  K  ++ D   L D +K +   P++ TY++ +  + E+G  +   +
Sbjct: 653 RLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATS 712

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF- 493
           L+  M+  +I      YT ++   CK  +  +A  L+  M   G  P  ++Y  ++    
Sbjct: 713 LVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLI 772

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C+ +  +     +N  W  +  P    + ++IDGL   G    +  +++ L+  N   + 
Sbjct: 773 CEGQTDKAKEIFMNSRW-KDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSH 831

Query: 554 VAYTTIIK 561
             Y  + +
Sbjct: 832 QTYAMLTE 839



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 112/477 (23%), Positives = 206/477 (43%), Gaps = 52/477 (10%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV+T + ++ G C + ++  A+  L +       P  V+ N ++   C  G  E A  L 
Sbjct: 358 NVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLL 417

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            LM   GL  D ++YN LI+ LC  G  ++A    + +   G++P+A+T++ L  G    
Sbjct: 418 RLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKS 477

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK----------------- 224
            +   AWK ++K++  G  PD  TY+  I   C++   +EGL                  
Sbjct: 478 GKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNY 537

Query: 225 -------LREV-----------MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
                  L+E            M+S G   +V+ Y+  + + C  GR++EA  +L EM  
Sbjct: 538 TIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSK 597

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI-- 324
            G+  D + Y+ L+ G     +   A+ +  +M S    PN F +  +L  L    ++  
Sbjct: 598 NGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVED 657

Query: 325 ----TEARMY-----------FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
               T A ++           FD +  +  + +   Y+ +++G+ + G   EA  L   +
Sbjct: 658 VLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLM 717

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            E  IS +   + +L+  FCK+ +  DA  L+ ++  HG  P  ++Y   ++    EG  
Sbjct: 718 KEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQT 777

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
            +   +      K   P  + + V+I GL K+     + +++  +  +   P   TY
Sbjct: 778 DKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTY 834



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 113/479 (23%), Positives = 214/479 (44%), Gaps = 40/479 (8%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G VH A+ ++ KM+   +     TYN L+       H +  + L   ++      + YT 
Sbjct: 373 GKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTY 432

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I+ LC+  R   A         +   P+ V+ N++++  CK G A++A      M+ 
Sbjct: 433 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVS 492

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL------AKGFHL 180
            G  PD ++Y+  I  LC     +E L F  +M +  V+P  + Y+I+       + + L
Sbjct: 493 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGL 552

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +++  G      +++  G +PD+VTYT  +  YC  G + E   +   M   G  ++ +A
Sbjct: 553 VARTWG------EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMA 606

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH---------- 290
           Y+ L+      G+ D A+ +L +M +V   P+  TY IL+R L +   V           
Sbjct: 607 YNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGV 666

Query: 291 -KAIQL------YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-D 342
            KAI+L      ++ M      PNS  + +IL G  E     EA     SL+  + I  +
Sbjct: 667 WKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLV-SLMKEDSISLN 725

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
             +Y  ++  + K     +A  L   +I+    P ++++  L+ G    G+   A+ +  
Sbjct: 726 EDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFM 785

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEG--NIQR-LLALLQEMETKAIGPTHVTYTVVIKGL 458
             +     P  + +   ++   ++G  +I R ++ +L+ M  +   P+H TY ++ + L
Sbjct: 786 NSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCR---PSHQTYAMLTEEL 841



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 129/302 (42%), Gaps = 24/302 (7%)

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN +I    +  ++  A++    ++     P   TFNSLI G+C+  +V  AR L D + 
Sbjct: 156 YNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 215

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           L G     V+Y T +   CE G I   + L  EM+     P    Y  ++KGLC   + +
Sbjct: 216 LRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGE 271

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           E + +L  M  +G  P    Y  ++   C+ +  ++A ++L +M+   L P   T   +I
Sbjct: 272 EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 331

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           +  C  G + +A  +L  ++          Y  +++  C EG VHKAMT   +M   G  
Sbjct: 332 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN 391

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                               PD     +++      G + S F L  +M   GL+ D++ 
Sbjct: 392 --------------------PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 431

Query: 646 IN 647
            N
Sbjct: 432 YN 433


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 150/498 (30%), Positives = 247/498 (49%), Gaps = 10/498 (2%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           S+ S N +++   K+        L+  M   GL PD  + NILI+ LC    + E L   
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
             + R G  PD +T++ L KG  +  +I  A K+  ++   G  P++VTY  LI G C +
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209

Query: 217 GNVEEGLKLREVMLSQ------GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
           GN+   LK  + ML+         + NVI+YS+++  +CK G  +EA+ L  EM   G++
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P++VT+S+LI  LCK+ +V KA +L   M    I PN F + +++ G C    +  A+  
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           F S+       DV+ YN++I+GY K   + EA++L+ +++   + P + T   L+     
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFL 389

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            GKV DA+ L   IK + +         F++  C+ G I   + L  E+E+  +     T
Sbjct: 390 AGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIET 449

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           +  +I GLCK  KL+ A +L E +Y  G+ PD + Y+++I  FCK   + KA  L  +M 
Sbjct: 450 FGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKME 509

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
            +   P   TY+IL+ G   +  L+    LL  + E ++      Y  +    C +    
Sbjct: 510 ENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYK 569

Query: 571 KAM----TFFCQMVEKGF 584
           + +     FF Q    G+
Sbjct: 570 EWLDLLQRFFVQKHRNGY 587



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 250/492 (50%), Gaps = 9/492 (1%)

Query: 30  SIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           SI ++N LL  L    H   ++ LY  + ++    ++ T +I+I+ LC  +R+ + +  +
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
                + + P VV+   ++   C       A  LF  M K G  P+  +Y  LI GLC  
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209

Query: 147 GSMEEAL----EFTNDMGRH--GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
           G++  AL    E  ND   +     P+ I+YSI+  G   +     A  +  +++ +G  
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P++VT++VLI   C+ G V +  KL E+M+  G   N+  Y+ L+   C  G ++ A  L
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
              M + G +PD+++Y++LI G CK  KV +A++L+NEM    + P+    G +L  L  
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFL 389

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              + +A+  F  +      +D+ +  I +DG  K G I EA++L+ +L    +   I T
Sbjct: 390 AGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIET 449

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           F  LI G CK GK+  A  L + +   G++P A+ Y++ ++ +C++G + +   L Q+ME
Sbjct: 450 FGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKME 509

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
                P  +TY+++++G  +  KL++ VQLL  M    V PD   Y  +    CK +  +
Sbjct: 510 ENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYK 569

Query: 501 KAFQLLNQMWLH 512
           +   LL + ++ 
Sbjct: 570 EWLDLLQRFFVQ 581



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 256/555 (46%), Gaps = 100/555 (18%)

Query: 131 PDAFSYNILIHGL------CIAGSME--EALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           P+  S+    HG+      C  GS+   +A +F + M R        +++ L  G   + 
Sbjct: 54  PERISFQ---HGIPMFLHKCKTGSISVTQAHQFFDLMMR-----SIFSFNRLLAGLAKIE 105

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
             S  + + +++ + G  PD++T  +LI   C +  + EGL     ++ +G+  +V+ ++
Sbjct: 106 HYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFT 165

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +C   RI EA  L   M+ +G  P++VTY  LI+GLC    ++ A++ + EM + 
Sbjct: 166 TLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLND 225

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             SP  F                            NC  +V+ Y+I+IDG  K+GN  EA
Sbjct: 226 T-SPYVF----------------------------NCRPNVISYSIIIDGLCKVGNWEEA 256

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + L+ +++++ + P++VTF+ LI   CK G+V  A++LL+ +   G+ P+  TYT+ +  
Sbjct: 257 ICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKG 316

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +C  G++     L   M +K   P  ++Y ++I G CK  K++EA++L  +M  +G+ PD
Sbjct: 317 FCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPD 376

Query: 483 QITYNTIIRSF-----------------------------------CKCKDLRKAFQLLN 507
             T   ++++                                    CK   + +A +L N
Sbjct: 377 VKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFN 436

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           ++  +N++    T+  LIDGLC  G L+ A  L   L E  I    +AY+++I   C +G
Sbjct: 437 ELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKG 496

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
            V KA   F +M E                    NG  PD     +++  F++   L  V
Sbjct: 497 QVDKANILFQKMEE--------------------NGCSPDLITYSILMRGFYESNKLEKV 536

Query: 628 FELAAVMIKSGLLPD 642
            +L   MI+  + PD
Sbjct: 537 VQLLHRMIEKDVWPD 551



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 227/482 (47%), Gaps = 13/482 (2%)

Query: 109 CKLGFAEV--AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
           CK G   V  A   F LM++       FS+N L+ GL       +       M   G+ P
Sbjct: 70  CKTGSISVTQAHQFFDLMMR-----SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWP 124

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           D +T +IL      +++I+     +  ++ +G  PD+VT+T LI G C    + E  KL 
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM------EAVGLKPDLVTYSILI 280
             M   G   NV+ Y  L+  +C  G I+ AL    EM           +P++++YSI+I
Sbjct: 185 MRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIII 244

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
            GLCK     +AI L+NEM  + + PN      ++  LC++  + +A+   + +I    +
Sbjct: 245 DGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIV 304

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            ++  Y  +I G+  +G++  A +L+  +  K   P ++++N LI G+CK  KV +A +L
Sbjct: 305 PNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKL 364

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            + +   G+ P   T    + A    G +     L + ++  A+        + + GLCK
Sbjct: 365 FNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCK 424

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
              + EA++L  ++    +  D  T+  +I   CK   L  A++L  +++   ++P +  
Sbjct: 425 NGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMA 484

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y+ +I G C  G +  A+ L   ++E+  S   + Y+ +++       + K +    +M+
Sbjct: 485 YSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMI 544

Query: 581 EK 582
           EK
Sbjct: 545 EK 546



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 205/397 (51%), Gaps = 9/397 (2%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETP------RNVY 64
           +A  +  +M++L    ++ TY +L   L  L + +I    + ++    +P       NV 
Sbjct: 179 EATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVI 238

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           + SI+IDGLC+    ++AI    E   +   P+VV+ + ++   CK G    AK L  +M
Sbjct: 239 SYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMM 298

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G+ P+ F+Y  LI G C+ G +  A E    M   G EPD I+Y++L  G+    ++
Sbjct: 299 IQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKV 358

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A K+  ++L  G  PD+ T  VL+      G V++  +L  V+       ++    + 
Sbjct: 359 EEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIF 418

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L  +CK+G I EA+ L  E+E+  +K D+ T+  LI GLCK  K+  A +L+ ++  + I
Sbjct: 419 LDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGI 478

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P++ A+ +++ G C+K  + +A + F  +  + C  D++ Y+I++ G+ +   + + VQ
Sbjct: 479 QPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQ 538

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           L  ++IEK + P    +  +    CK+ K  +   LL
Sbjct: 539 LLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLL 575


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 209/406 (51%), Gaps = 3/406 (0%)

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P   S N L+ GL  A  ++ A +      R  V PD  T++ +  G   + Q+  A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQ---IGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           V + +   G  P + TY  LI GYC+    GN+     L + M+  G     + + VL++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             CK+     A+ +  EM+  G+   +VTY+ LI GLC + KV + ++L  EM    +SP
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N    G +L G C+K M+ +A  + D +   N   DVV+YNI+ID Y +LG + +A+ + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             + +K ISP++ T+N LI GF ++G    A  LLD +K  G+E   VTY   + A C +
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +++ + LL EM    + P H+TY  +I+G C +  ++ A ++   M       + +TY
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           N  I+ FC+   + +A  LLN+M    L P   TY  + +G+   G
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 207/441 (46%), Gaps = 9/441 (2%)

Query: 181 LSQISGAWKVIQKLLIKGSD-----PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
           L++ S   +     L+ G       P   +   L+ G      V+   K     L +   
Sbjct: 129 LARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVS 188

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD---KVHKA 292
            ++  ++ ++S +C+ G++ +A  +  +++A GL P + TY+ LI G CK+     ++  
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
             L  EM    ISP +   G ++ G C+      A   F+ +        VV YN +I G
Sbjct: 249 DMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
               G + E V+L  ++ +  +SP+ +TF  ++ GFCK G +ADA   +D +    +EP 
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            V Y   ++ Y   G ++  +A+ + M  K I P   TY  +I G  +    + A  LL+
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +M   G+  D +TYN +I + C   ++RKA +LL++M    LEP   TYN +I G C  G
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           ++K+A  +   +++       V Y   IK  C  G + +A     +M++K    +   Y 
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITY- 547

Query: 593 KSFFCMMLSNGFPPDQEICEV 613
           ++    M+  G+ PD   C V
Sbjct: 548 ETIKEGMMEKGYTPDIRGCTV 568



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 185/355 (52%), Gaps = 7/355 (1%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQS---RLQDAILFLQETAGKEFGPSVVSLNAIM 105
           D+  DIK      +V T + +IDG C++     +    + L+E       P+ V+   ++
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 106 SRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE 165
           + YCK      A  +F  M + G+     +YN LI GLC  G +EE ++   +M   G+ 
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           P+ IT+  + KGF     ++ A   I  +  +  +PD+V Y +LI  Y ++G +E+ + +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
           +E M  +G   NV  Y+ L++   +SG    A GLL EM+  G++ D+VTY++LI  LC 
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ--DV 343
           + +V KA++L +EM    + PN   +  I+ G C+K  I  A  Y     M  C +  +V
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSA--YEIRTRMEKCRKRANV 509

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           V YN+ I  + ++G + EA  L  ++++K + P+ +T+ ++  G  + G   D R
Sbjct: 510 VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIR 564



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 142/327 (43%), Gaps = 40/327 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y +      AV V  +MK+  +  S+ TYNSL                            
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSL---------------------------- 305

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
               I GLC + ++++ +  ++E       P+ ++   ++  +CK G    A      M 
Sbjct: 306 ----ISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           +  + PD   YNILI      G ME+A+     M + G+ P+  TY+ L  GF      S
Sbjct: 362 ERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR----S 417

Query: 186 GAWKVIQKLLI----KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           G W+    LL     KG + D+VTY VLI   C  G V + +KL + M   G + N + Y
Sbjct: 418 GDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTY 477

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++   C  G I  A  +   ME    + ++VTY++ I+  C+  K+ +A  L NEM  
Sbjct: 478 NTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537

Query: 302 KRISPNSFAHGAILLGLCEKEMITEAR 328
           K + PN   +  I  G+ EK    + R
Sbjct: 538 KCLVPNGITYETIKEGMMEKGYTPDIR 564



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 124/293 (42%), Gaps = 18/293 (6%)

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
           R  PS  + N+L+ G     +V  A +   +     + P   T+ T ++  C  G +++ 
Sbjct: 151 RHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKA 210

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQ---WKLQEAVQLLEDMYVIGVTPDQITYNTI 489
             + ++++   + P+  TY  +I G CK+     +     LL++M   G++P  +T+  +
Sbjct: 211 GDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I  +CK  +   A ++  +M    +  +  TYN LI GLC  G ++    L+  +++  +
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI----------RDYTKSFFCM- 598
           S  ++ +  ++K  C +G +  A  +   M E+  E  +          R   K    M 
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390

Query: 599 ----MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               M   G  P+      ++  F + GD  S   L   M + G+  D    N
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYN 443



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 23/209 (11%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMW----DLYDDIKVSET 59
           VY R G + DA+ V   M +  +  ++ TYN L+    R  D  W     L D++K    
Sbjct: 378 VYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD--WRSASGLLDEMKEKGI 435

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             +V T +++I  LC +  ++ A+  L E +     P+ ++ N I+  +C  G  + A  
Sbjct: 436 EADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE 495

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   M K     +  +YN+ I   C  G M+EA +  N+M    + P+ ITY  + +G  
Sbjct: 496 IRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG-- 553

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
                         ++ KG  PDI   TV
Sbjct: 554 --------------MMEKGYTPDIRGCTV 568


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 151/571 (26%), Positives = 272/571 (47%), Gaps = 25/571 (4%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
           G S   L+ ++  +        AK +F    K G+  +  S N L+  L     +E    
Sbjct: 112 GRSATVLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRS 171

Query: 155 FTNDMGRHGVEPDAITYSIL----AKGFHLLS-QISGAWKVIQKLLIKGSDPDIVTYTVL 209
             +D+   G  P+  TY+I+     K  H  +  +  A  +++++  KG +P +VTY V 
Sbjct: 172 LFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVY 231

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G C++G++E+     + + S    LN+  Y+ L+   C+ GR DEAL LL EM+  G+
Sbjct: 232 IHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGI 291

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEM--CSKRISPNSFAHGAILLGLCEKEMITEA 327
            PD+ +YSIL+   C +  +   + L  EM  C+K+  P      ++L+GL  K ++ + 
Sbjct: 292 SPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKK--PPLVCCTSVLMGLRTKGLVNDC 349

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
             +F  L       D++ Y+ +I G++K  N+  A  L  ++ +  + P  + + SLI  
Sbjct: 350 LNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIRE 409

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           +C+ G + +A +   T+   GL+P  +T    ++ YC  G  +  L  + +M+ + I P 
Sbjct: 410 YCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPN 469

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK-CKDLRKAFQLL 506
             TY+V+I  LCK   +++A ++L  M+   + P  I Y TI+  + K  K+  KA++L 
Sbjct: 470 SYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLY 529

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +M     +P + T  +L+D     G +  A  L   + E  +S  + A+T II  +C  
Sbjct: 530 RKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRV 589

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYT--KSFFCM-------------MLSNGFPPDQEIC 611
           G+V +A + + +M       +++ YT     FC              M  N   PD +  
Sbjct: 590 GNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTY 649

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             ++  + +  ++   +E+   M K G LPD
Sbjct: 650 TALIAGYQRIENIDRAYEVFDEMKKKGTLPD 680



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 153/565 (27%), Positives = 262/565 (46%), Gaps = 44/565 (7%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVS 57
           +L  V++   M+ DA  V  + K++ ++++I + N LL  L   D    +  L+DD+K S
Sbjct: 120 LLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNS 179

Query: 58  ETPRNVYTNSIVIDGLCQQSR-----LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
               NVYT +I+I+  C++       ++ A L L+E   K   P+VV+    +   C++G
Sbjct: 180 GPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVG 239

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
             E A      +       + + YN LI G C  G  +EAL+   +M   G+ PD  +YS
Sbjct: 240 SIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYS 299

Query: 173 ILAKGFHLLSQISGAWKVIQ-----------------------------------KLLIK 197
           IL   F     I     +IQ                                   +L  K
Sbjct: 300 ILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAK 359

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G   D+++Y+ LI G+ +  NV+    L   M   G   + I Y  L+   C+ G + EA
Sbjct: 360 GYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEA 419

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L   Y M   GL+PD++T + ++   C + +  +A+   N+M  + I PNS+ +  I+  
Sbjct: 420 LKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINW 479

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK-LGNIGEAVQLYRQLIEKRISP 376
           LC+ + + +A      +   N    V+ Y  ++DGY K   N  +A +LYR++ +    P
Sbjct: 480 LCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKP 539

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
             VT   L+  F K GK++ A  L   +   GL      +T  ++ YC  GN++R  ++ 
Sbjct: 540 DNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMY 599

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           ++M+   + P   TYT ++ G CK  +L  A  L++DM    VTPD  TY  +I  + + 
Sbjct: 600 KKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRI 659

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATY 521
           +++ +A+++ ++M      P    Y
Sbjct: 660 ENIDRAYEVFDEMKKKGTLPDHIAY 684



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 121/543 (22%), Positives = 230/543 (42%), Gaps = 44/543 (8%)

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD------------------- 167
           YG      ++  ++H   +AG   EA     D+  +  E +                   
Sbjct: 54  YGFFYSINAFRTIVHVFALAGLQREAQYLLTDIVFYYKEENLNVSGLFSTFLDSPECVGR 113

Query: 168 -AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
            A   S+L K F     ++ A  V  +    G + +I +   L+    +   +E    L 
Sbjct: 114 SATVLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLF 173

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGR-----IDEALGLLYEMEAVGLKPDLVTYSILIR 281
           + + + G   NV  Y+++++  CK        +++A  +L EME  G  P +VTY + I 
Sbjct: 174 DDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIH 233

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           GLC+   +  A     ++ S     N + + A++ G C+K    EA    + +       
Sbjct: 234 GLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISP 293

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D+  Y+I+++ +   G+I   + L +++      P +V   S++ G    G V D     
Sbjct: 294 DIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFF 353

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +   G +   ++Y+T ++ + +  N++    L+ EM    + P ++ Y  +I+  C++
Sbjct: 354 HELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRK 413

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
             L+EA++    M   G+ PD IT N I+  +C      +A   +NQM   N+ P S TY
Sbjct: 414 GCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTY 473

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           +++I+ LC    ++ A  +L  + + NI  + + YTTI+  +                  
Sbjct: 474 SVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYA----------------- 516

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           K F+  ++ +    +  M   G  PD     V++  F + G +     L   M + GL  
Sbjct: 517 KQFKNPMKAW--KLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSR 574

Query: 642 DKF 644
           D+F
Sbjct: 575 DEF 577



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/391 (24%), Positives = 179/391 (45%), Gaps = 4/391 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVS 57
           +L   +   G +   + +I +M+  + K  +    S+L  LR   ++ D    + ++   
Sbjct: 300 ILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAK 359

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               ++ + S +I G  +   ++ A   + E       P  +   +++  YC+ G  + A
Sbjct: 360 GYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEA 419

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              F  ML+ GL PD  + N ++   C  G  EEAL + N M    + P++ TYS++   
Sbjct: 420 LKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINW 479

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC-QIGNVEEGLKLREVMLSQGFKL 236
                 +  AW+V+  +      P ++ YT ++ GY  Q  N  +  KL   M   G K 
Sbjct: 480 LCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKP 539

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + +  +VL+    K G++ +AL L  EM   GL  D   ++ +I G C+   V +A  +Y
Sbjct: 540 DNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMY 599

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M    ++PN   +  ++ G C+ + +  A M  D +  ++   DV  Y  +I GY ++
Sbjct: 600 KKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRI 659

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
            NI  A +++ ++ +K   P  + + +L  G
Sbjct: 660 ENIDRAYEVFDEMKKKGTLPDHIAYLTLGLG 690


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/552 (25%), Positives = 275/552 (49%), Gaps = 24/552 (4%)

Query: 110 KLGFAEVAKGLFCLMLKYGLH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           K    + AK +  LM +  +   P+AF + ++ +    AG + +A++    M + GVEP+
Sbjct: 258 KTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSR--AGRLRDAMKVLTLMQKAGVEPN 315

Query: 168 AITYSILAKGFHLL---SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
               SI     H+L   +++  A +  +++++ G  P++VTY  LI GYC +  V++ ++
Sbjct: 316 ---LSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAME 372

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA-VGLKPDLVTYSILIRGL 283
           L + M S+G   + ++Y  ++  +C+  R++E   L+ +M+    L PD VTY+ LI+ L
Sbjct: 373 LIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQML 432

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
            K     +A+++  E    R   +   + AI+   C++  I +A+     +    C  DV
Sbjct: 433 SKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDV 492

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V Y  ++DG+ ++G + +A ++ +Q+ +    P+ VT+ + + G C+NGK  +AR++++ 
Sbjct: 493 VTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNM 552

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
            +     P+A+TY+  ++    EG +     +++EM  K   P  V   +++  LC+  K
Sbjct: 553 SEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGK 612

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
            +EA QLL++    G   + + + T+I  FC+  DL  A  LL+ M+L N  P + TY  
Sbjct: 613 PREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTA 672

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH------------- 570
           LID L     ++ A  L + +    +  + V Y ++I  +C +G V              
Sbjct: 673 LIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKS 732

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
           +  T +  ++EK  +    +   S    +L      D + C V++ ++   G   S +++
Sbjct: 733 RFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYKV 792

Query: 631 AAVMIKSGLLPD 642
           A  M    L+PD
Sbjct: 793 ACRMFNRNLIPD 804



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 145/550 (26%), Positives = 263/550 (47%), Gaps = 14/550 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW-DLYDDIKVSET----- 59
           YSR G + DA+ V+  M++  ++ ++   N+ +    H  +M  +L   ++ +E      
Sbjct: 291 YSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAI----HILVMGNELKKALRFAERMVLIG 346

Query: 60  -PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK-LGFAEVA 117
              NV T + +I G C   ++  A+  + +   K   P  VS   +M   C+     E+ 
Sbjct: 347 IAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIR 406

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + +  +     L PD  +YN LI  L   G  +EALE   +  +   + D + YS +   
Sbjct: 407 ELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHA 466

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +    +I  A +++ ++  KG DPD+VTYT ++ G+C+IG +++  K+ + M     K N
Sbjct: 467 YCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPN 526

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + Y+  L+ +C++G+  EA  ++   E     P+ +TYS+++ GL ++ K+++A  +  
Sbjct: 527 AVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVR 586

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  K   PN      ++  LC      EA       +   C  +VV +  +I G+ +  
Sbjct: 587 EMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKD 646

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           ++  A+ L   +      P  VT+ +LI    K  ++ +A  L   +   GL PS VTY 
Sbjct: 647 DLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYR 706

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           + ++ YC +G ++ LL LL++M  K+   T   Y +VI+ LCK   L+EA  LL ++   
Sbjct: 707 SVIHQYCRKGRVEDLLKLLKKMLLKSRFQT--AYNLVIEKLCKFGYLEEANSLLGEVLRT 764

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
               D  T + ++ S+        A+++  +M+  NL P       +   L V G L+ A
Sbjct: 765 ASRTDAKTCHVLMESYLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEA 824

Query: 538 DCLLVSLQEH 547
           D L++   E 
Sbjct: 825 DRLVLRFVER 834



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 160/351 (45%), Gaps = 36/351 (10%)

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           + D   Y +++  L K      A ++   M  +RI     A G +++       + +A  
Sbjct: 243 RHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMK 302

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               +  +    ++ + N  I   V    + +A++   +++   I+P++VT+N LI G+C
Sbjct: 303 VLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYC 362

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA-IGPTH 448
              +V  A  L+D +   G  P  V+Y T M   C +  +  +  L+++M+T + + P H
Sbjct: 363 NVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDH 422

Query: 449 VT-----------------------------------YTVVIKGLCKQWKLQEAVQLLED 473
           VT                                   Y+ ++   CK+ K+Q+A +L+ +
Sbjct: 423 VTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSE 482

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M+  G  PD +TY +++  FC+   L +A +++ QM+ H+ +P + TY   ++GLC NG 
Sbjct: 483 MFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGK 542

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
              A  ++   +E   +   + Y+ ++     EG +++A     +M+ KGF
Sbjct: 543 SLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGF 593



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            D  +Y +M++   K      A ++ R +  +RI      F  ++  + + G++ DA ++
Sbjct: 244 HDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKV 303

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L  ++  G+EP+     T ++       +++ L   + M    I P  VTY  +IKG C 
Sbjct: 304 LTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCN 363

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN-LEPTSA 519
             ++ +A++L++ M   G +PD+++Y T++   C+ K L +  +L+ +M   + L P   
Sbjct: 364 VHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHV 423

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYN LI  L  +G    A  +L   ++    + KV Y+ I+ A+C EG + KA     +M
Sbjct: 424 TYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEM 483

Query: 580 VEKGFEISIRDYT 592
             KG +  +  YT
Sbjct: 484 FSKGCDPDVVTYT 496


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 223/446 (50%), Gaps = 14/446 (3%)

Query: 80  QDAILFLQETAGKEFGPSVVS--------------LNAIMSRYCKLGFAEVAKGLFCLML 125
           Q  I FL    GK+   SV +               +A+M  Y   GF   A   F L+ 
Sbjct: 121 QSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR 180

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
                        L+  +  + S      F +++  +G  P    Y+IL   F     I 
Sbjct: 181 NSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIR 240

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  +  ++  +G  P  V++  LI G C+  N++EG +L++ M       +V  YSVL+
Sbjct: 241 DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLI 300

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +CK GR+D A  L  EM+  GL+P+ +T++ LI G  +  ++  A+  Y++M +  + 
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVK 360

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+   +  +L GLC+   + +AR   D + M     D + Y  +IDGY K G++  A+++
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
            + + E+ +    V F +LI GFC++G+V DA R L  +   G++P   TYT  ++ YC+
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +GN++    LL+EM+     P  +TY V++ GLCKQ +++ A  LLE M  +GVTPD IT
Sbjct: 481 KGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDIT 540

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWL 511
           YN ++   CK        +L N+  L
Sbjct: 541 YNILLEGHCKNGKAEDLLKLRNEKGL 566



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 200/364 (54%), Gaps = 3/364 (0%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           +L  GF   V  Y++L++  CK G I +A  +  E+   GL+P  V+++ LI GLCK   
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + +  +L   M   RI P+ F +  ++ GLC++  +  A   FD +       + + +  
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDG  +   +  A+  Y Q++   + P +V +N+L+ G CK G V  AR+L+D +K+ G
Sbjct: 334 LIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVG 393

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           ++P  +TYTT ++ YC+EG+++  + + + M  + +   +V +T +I G C+  ++++A 
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           + L +M   G+ PD  TY  +I  +CK  +++  F+LL +M ++  +P   TYN+L++GL
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C  G +KNA+ LL ++    ++   + Y  +++ HC  G   KA        EKG  +  
Sbjct: 514 CKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDY 570

Query: 589 RDYT 592
             YT
Sbjct: 571 AYYT 574



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 207/425 (48%), Gaps = 6/425 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSE 58
           L   Y  +G V DA+     ++  + ++       LL  + +++    +W  Y +I    
Sbjct: 159 LMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYG 218

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
            P  V   +I+I+  C++  ++DA L   E   +   P+ VS N +++  CK    +   
Sbjct: 219 FPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGF 278

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M +  ++PD F+Y++LIHGLC  G ++ A +  ++M + G+ P+ IT++ L  G 
Sbjct: 279 RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQ 338

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
           +   ++  A     ++L  G  PD+V Y  L+ G C++G+V +  KL + M   G K + 
Sbjct: 339 YRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDK 398

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           I Y+ L+   CK G ++ A+ +   M   G+  D V ++ LI G C+  +V  A +   E
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M    + P+   +  ++ G C+K  +         + ++     V+ YN++++G  K G 
Sbjct: 459 MVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ 518

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +  A  L   ++   ++P  +T+N L+ G CKNGK  D  +L +     GL      YT+
Sbjct: 519 MKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAYYTS 575

Query: 419 FMNAY 423
            ++ Y
Sbjct: 576 LVSEY 580



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 180/378 (47%)

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           +  L+  Y   G V + ++   ++ +  F++       LL  M  S           E+ 
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G  P +  Y+ILI   CK+  +  A  ++NE+  + + P + +   ++ GLC+   + 
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           E      ++  +    DV  Y+++I G  K G +  A QL+ ++ ++ + P+ +TF +LI
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G  ++ ++  A      +   G++P  V Y T +N  C+ G++ +   L+ EM+   + 
Sbjct: 336 DGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMK 395

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  +TYT +I G CK+  L+ A+++ + M   GV  D + +  +I  FC+   +R A + 
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           L +M    ++P  ATY ++IDG C  G++K    LL  +Q +      + Y  ++   C 
Sbjct: 456 LREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCK 515

Query: 566 EGDVHKAMTFFCQMVEKG 583
           +G +  A      M+  G
Sbjct: 516 QGQMKNANMLLEAMLNLG 533


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 151/536 (28%), Positives = 264/536 (49%), Gaps = 11/536 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  + +I++D L +  ++ +A++ L     +     V++   ++    K G  + A+ LF
Sbjct: 44  NNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLF 103

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
           C + +  L P+  +Y+ LI   C  G +  A    ++M      P+ ITYS L  G+   
Sbjct: 104 CNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQ 163

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A+KV++K++ K + P+I TY +L+ G  + G  +  L L   M   G K NV   
Sbjct: 164 GLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFIL 223

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
              +++M +SGR++EA  L+ +M + GLKPDLV Y+ L+ G  K  KV  A+ L  EM S
Sbjct: 224 DAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTS 283

Query: 302 KR-----ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           K      ++ N   +    LG  + E I      + ++       D+  YN M++G  K 
Sbjct: 284 KNVVFDIVTFNVLINCLFKLGKSDTESI------YSAMREMGLSPDLATYNTMLNGNFKK 337

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           GN   A++L+ ++  +++ P+ +T N +I G C+ G++ +A  +L  + L GL P++ TY
Sbjct: 338 GNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTY 397

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              +N   +      +L   + +    +      Y ++I  LCK    ++A  +L+DM  
Sbjct: 398 RILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEE 457

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+  D  TYN +I  +C    L++AF   + M    + P   TYN+L+ GL   G +  
Sbjct: 458 RGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHE 517

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           AD LL  +++  +      Y T++  HC   +  + +  +C+MV KGF    R Y 
Sbjct: 518 ADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYN 573



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/524 (25%), Positives = 245/524 (46%), Gaps = 37/524 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVY 64
           ++G + +A ++   + +L+L  +  TY++L+ +   L   +       +++  +   NV 
Sbjct: 92  KSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVI 151

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S +I+G  +Q  L DA   L++   K   P++ +   ++    K G+ ++A  L+  M
Sbjct: 152 TYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKM 211

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + GL  + F  +  ++ +  +G MEEA E    M   G++PD + Y+ L  GF    ++
Sbjct: 212 KQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKV 271

Query: 185 SGAWKVIQKLLIK----------------------------------GSDPDIVTYTVLI 210
           S A  + Q++  K                                  G  PD+ TY  ++
Sbjct: 272 SSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYSAMREMGLSPDLATYNTML 331

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G  + GN    L+L   M S+    N I  +++++ +C++GR++ A+ +L EM  +GL 
Sbjct: 332 NGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLY 391

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P   TY IL+    K  +    +Q +  + + ++  +   +  ++  LC+  M  +A   
Sbjct: 392 PTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAV 451

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
              +     I D   YN +I GY    ++  A   Y  ++ +R+SP I T+N L+ G  K
Sbjct: 452 LKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSK 511

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G + +A  LL  IK  GL P+A TY T M  +C+  N +  L +  EM  K   P    
Sbjct: 512 AGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRA 571

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           Y ++I    K  K+++A +L+ +M   GV+P   TY+ +I  +C
Sbjct: 572 YNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWC 615



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/547 (24%), Positives = 248/547 (45%), Gaps = 13/547 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T S +ID  C+   +  A   L E   K+  P+V++ +++++ Y K G    A  + 
Sbjct: 114 NYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVL 173

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+     P+  +Y IL+ G   AG  + AL+  + M + G++ +              
Sbjct: 174 RKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRS 233

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A +++ K+   G  PD+V YT L+ G+ + G V   L L + M S+    +++ +
Sbjct: 234 GRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTF 293

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL++ + K G+ D    +   M  +GL PDL TY+ ++ G  K+     A++L+NEM S
Sbjct: 294 NVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKS 352

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +++ PN+     ++ GLCE   +  A      +++         Y I+++   K      
Sbjct: 353 RKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADT 412

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            +Q +  L+  ++      +N LI   CK G    A  +L  ++  G+     TY   ++
Sbjct: 413 ILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIH 472

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC   +++R       M ++ + P   TY +++ GL K   + EA  LL ++   G+ P
Sbjct: 473 GYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVP 532

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +  TY T++   CK ++ ++  ++  +M +    P    YN+LI      G +K A  L+
Sbjct: 533 NACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELM 592

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG--FEISIRDYTKSFFCMM 599
             +Q   +S T   Y  +I   C             +M + G   +IS R   K  F  M
Sbjct: 593 NEMQTKGVSPTCTTYDILICGWCN----------LLKMPDLGSTLKISYRAEAKRLFIEM 642

Query: 600 LSNGFPP 606
              GF P
Sbjct: 643 NDRGFVP 649



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/552 (26%), Positives = 243/552 (44%), Gaps = 21/552 (3%)

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
           G    P VV+  +I+   CK G     K L   M K G++ +  SY IL+  L  AG + 
Sbjct: 3   GSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVA 62

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           EAL     M   G   D I  ++L  G     QI  A  +   L      P+ +TY+ LI
Sbjct: 63  EALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALI 122

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
              C++G++         M  +    NVI YS L++   K G + +A  +L +M      
Sbjct: 123 DSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAM 182

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P++ TY+IL+ G  K      A+ LY++M    +  N F   A +  +     + EA   
Sbjct: 183 PNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEEL 242

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
              +       D+V Y  ++DG++K G +  A+ L +++  K +   IVTFN LI    K
Sbjct: 243 VAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFK 302

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            GK +D   +   ++  GL P   TY T +N   ++GN    L L  EM+++ + P  +T
Sbjct: 303 LGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAIT 361

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
             ++I GLC+  +++ A+ +L++M ++G+ P   TY  ++    K +      Q    + 
Sbjct: 362 CNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLV 421

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              L+     YNILI  LC  G  + A  +L  ++E  I      Y  +I  +C    + 
Sbjct: 422 NMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLK 481

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
           +A   +                      MLS    PD E   ++L    + G +    +L
Sbjct: 482 RAFMTYST--------------------MLSERVSPDIETYNLLLGGLSKAGLIHEADDL 521

Query: 631 AAVMIKSGLLPD 642
            + + K GL+P+
Sbjct: 522 LSEIKKRGLVPN 533



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 169/384 (44%), Gaps = 21/384 (5%)

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M   G+ PD+VT+  ++ GLCK  K+ +   L  EM    ++ N+ ++  +L  L +   
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           + EA M    +I+     DV+   ++IDG  K G I EA  L+  L +  + P+ +T+++
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI   CK G +  A   L  ++     P+ +TY++ +N Y ++G +     +L++M  K 
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             P   TY +++ G  K      A+ L   M   G+  +    +  + +  +   + +A 
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           +L+ +M    L+P    Y  L+DG   +G + +A  L   +   N+    V +  +I  +
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLI--N 298

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           C                   F++   D T+S +  M   G  PD      ML    + G+
Sbjct: 299 CL------------------FKLGKSD-TESIYSAMREMGLSPDLATYNTMLNGNFKKGN 339

Query: 624 LGSVFELAAVMIKSGLLPDKFLIN 647
             S  EL   M    L+P+    N
Sbjct: 340 WTSALELWNEMKSRKLIPNAITCN 363


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 273/553 (49%), Gaps = 57/553 (10%)

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNI---LIHGLCIAGSMEEALEFTNDMGRHGV- 164
           C+L F+E+++          L    F+ N+   LI  LC    +EEAL   + +G     
Sbjct: 98  CQLAFSELSR----------LKSSKFTPNVYGELIIVLCKMELVEEALSMYHKVGAALTI 147

Query: 165 -EPDAITYSILAKG-FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
              + + Y ++  G F LL      W++ ++++  G  P ++T+  LI G C+ G++   
Sbjct: 148 QACNVLLYVLVKTGRFELL------WRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRA 201

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
            ++ + M  +G    VI Y++L+  +C   +I+EA  +   M  VG+ P++ TY+ L+ G
Sbjct: 202 QEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDG 261

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
            CK     +A++LY +M  + + P+    G ++ GLC+   +  AR  F ++I  +   +
Sbjct: 262 YCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPN 321

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           + +YN +ID Y K+G++ EA+ L+ +L    +SP + T++ LI G C   +  +A  + +
Sbjct: 322 IAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFE 381

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G+  ++VTY + ++  C+EG + + L +  +M    + P  +T++ +I G CK  
Sbjct: 382 KMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIR 441

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            LQ A+ +  +M +  ++PD +TY  +I   CK   +++A +L + M  + + P   T +
Sbjct: 442 NLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTIS 501

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNI------------SLTK-VAYTTIIKAHCAEGDV 569
            L+DGLC +G + +A  L     E               SLT  VAYT +I   C +G  
Sbjct: 502 CLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQF 561

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
            KA+  F  M         R Y           G  PD+ I  VML    Q   +  +  
Sbjct: 562 SKAVKLFSDM---------RRY-----------GLQPDEVIYVVMLRGLFQVKYI--LMM 599

Query: 630 LAAVMIKSGLLPD 642
           L A M+K G++P+
Sbjct: 600 LHADMLKFGVIPN 612



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 242/485 (49%), Gaps = 24/485 (4%)

Query: 29  VSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILF 85
           ++IQ  N LLY L  T   +++W +Y+++  +    +V T   +IDG C+Q  L  A   
Sbjct: 145 LTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEM 204

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
             E   K   P+V+    ++   C     E A+ +   M + G++P+ ++YN L+ G C 
Sbjct: 205 FDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCK 264

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
             + ++AL    DM   G+ PD +T+ IL  G     ++  A  +   ++     P+I  
Sbjct: 265 LANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAV 324

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y  LI  YC++G+V E + L   +       +V  YS+L+  +C   R +EA  +  +M 
Sbjct: 325 YNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMT 384

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G+  + VTY+ LI G CK+ K+ KA+++ ++M    + PN      ++ G C+   + 
Sbjct: 385 KEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQ 444

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
            A   +  +++ +   DVV Y  MIDG+ K G++ EA++LY  +++  I+P+  T + L+
Sbjct: 445 AAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLL 504

Query: 386 YGFCKNGKVADARRLLD----------TIKLHGLEPS---AVTYTTFMNAYCEEGNIQRL 432
            G CK+GK++DA  L             +   G +PS    V YT  ++  C++G   + 
Sbjct: 505 DGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKA 564

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE-DMYVIGVTPDQITYNTIIR 491
           + L  +M    + P  V Y V+++GL   ++++  + +L  DM   GV P+   +  +  
Sbjct: 565 VKLFSDMRRYGLQPDEVIYVVMLRGL---FQVKYILMMLHADMLKFGVIPNSAVHVIL-- 619

Query: 492 SFCKC 496
             C+C
Sbjct: 620 --CEC 622



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 241/488 (49%), Gaps = 18/488 (3%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K S+   NVY   I++  LC+   +++A+    +        ++ + N ++    K G 
Sbjct: 108 LKSSKFTPNVYGELIIV--LCKMELVEEALSMYHKVGA---ALTIQACNVLLYVLVKTGR 162

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            E+   ++  M+  GL P   ++  LI G C  G +  A E  ++M   G+ P  I Y+I
Sbjct: 163 FELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTI 222

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L +G    ++I  A  + + +   G  P++ TY  L+ GYC++ N ++ L+L + ML +G
Sbjct: 223 LIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEG 282

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              +V+ + +L+  +CK G +  A  L   M    + P++  Y+ LI   CK   V +A+
Sbjct: 283 LVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAM 342

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            L+ E+    +SP+ F +  ++ GLC      EA   F+ +     + + V YN +IDG 
Sbjct: 343 ALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGC 402

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K G + +A+++  Q+ E  + P+++TF++LI G+CK   +  A  +   + +  L P  
Sbjct: 403 CKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDV 462

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTYT  ++ +C+ G+++  L L  +M    I P   T + ++ GLCK  K+ +A++L  +
Sbjct: 463 VTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTE 522

Query: 474 MYVI----------GVTP---DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
                         G  P   + + Y  +I   C+     KA +L + M  + L+P    
Sbjct: 523 KIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVI 582

Query: 521 YNILIDGL 528
           Y +++ GL
Sbjct: 583 YVVMLRGL 590



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 126/294 (42%), Gaps = 34/294 (11%)

Query: 363 VQLYRQLIE-----KRISPSIVTFNSLIYGFCKNGKVADARRL----LDTIKLHGLEPSA 413
           +QLY  +I      K +S +    N L+    K+ K   A +L    L  +K     P+ 
Sbjct: 58  IQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPN- 116

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
             Y   +   C+   ++  L++  ++       T     V++  L K  + +   ++ E+
Sbjct: 117 -VYGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEE 172

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G++P  IT+ T+I   C+  DL +A ++ ++M +  + PT   Y ILI GLC +  
Sbjct: 173 MISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNK 232

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           ++ A+ +  +++E  +      Y T++  +C   +  +A+  +            +D   
Sbjct: 233 IEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLY------------QD--- 277

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                ML  G  PD     +++    + G++ +   L   MIK  + P+  + N
Sbjct: 278 -----MLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYN 326


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 259/527 (49%), Gaps = 44/527 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDIKVSETPRN 62
           Y R+ +    + +  +++E   + S++ YN +L  L   ++   +  LY+++K      N
Sbjct: 119 YRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPN 178

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+T ++++  LCQ  ++  A   L E + K   P  VS   ++S  CKLG  + A+ L  
Sbjct: 179 VFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAREL-- 236

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             +K+   P    YN LIHG+C     +EA +  N+M   GV+P+ I+YS +      + 
Sbjct: 237 -AMKF--EPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMG 293

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  +  V  ++ ++G  P++ T+T LI G+   G V + + L  +M+ +G   NV+AY+
Sbjct: 294 NVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYN 353

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +C  G +DEA+ +  +ME   ++P++ TYS +I G  K   +  A + +N+M + 
Sbjct: 354 TLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINC 413

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI--- 359
              PN   +  ++  LC+  M  +A    D++I   C   V+ +N  I G  + G +   
Sbjct: 414 GCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWA 473

Query: 360 --------------------------------GEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                                            EA  L R+L E+++    VT+N+++YG
Sbjct: 474 MNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYG 533

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET-KAIGP 446
           F  NG      +LL  + ++G++   +T  T +NAYC+ G ++  + +L  +   K    
Sbjct: 534 FSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRA 593

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
             +T+T+++ G+C     +EAV  L +M   G+ P+  T+N ++R F
Sbjct: 594 DIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGF 640



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 251/529 (47%), Gaps = 6/529 (1%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T   +ID L + + +      LQ+   +    S      ++  Y +    E    +F  +
Sbjct: 76  TYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRI 135

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            ++G  P    YN+++  L      +      N+M   G+EP+  TY++L K      ++
Sbjct: 136 REFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKV 195

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
            GA K++ ++  KG DPD V+YT +I   C++G+V+   K RE  L+  F+  V  Y+ L
Sbjct: 196 DGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVD---KARE--LAMKFEPVVPVYNAL 250

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +CK  R  EA  L+ EM   G+ P++++YS +I  L     V  ++ ++  M  +  
Sbjct: 251 IHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGC 310

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN     +++ G   +  + +A   ++ +I      +VV YN +I G    GN+ EA+ 
Sbjct: 311 RPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAIS 370

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           ++ Q+ +  I P++ T++++IYGF K+G +  A    + +   G  P+ V YT  ++  C
Sbjct: 371 VWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLC 430

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +     +   L+  M +    PT +T+   IKGLC+  +++ A+ +L+ M      P+  
Sbjct: 431 QMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIR 490

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TYN ++    +    R+A  L+ ++    +E    TYN ++ G   NG  +    LL  +
Sbjct: 491 TYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKM 550

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM-VEKGFEISIRDYT 592
             + I L  +   T + A+C  G V  A+     +  EK F   I  +T
Sbjct: 551 LVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHT 599



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/457 (22%), Positives = 206/457 (45%), Gaps = 12/457 (2%)

Query: 152 ALEFTNDMGRHGV-EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           +LE+   +   G  +   +TY  +       +++ G   ++Q++ ++        +  +I
Sbjct: 57  SLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVI 116

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
             Y +    E+GLK+   +   G + +V  Y+++L ++           L   M++ GL+
Sbjct: 117 KCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLE 176

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR-- 328
           P++ TY++L++ LC+  KV  A +L  EM +K   P+  ++  ++  +C+   + +AR  
Sbjct: 177 PNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAREL 236

Query: 329 -MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
            M F+ +        V +YN +I G  K     EA  L  +++++ + P++++++++I  
Sbjct: 237 AMKFEPV--------VPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISC 288

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
               G V  +  +   + + G  P+  T+T+ +  +   G +   + L   M  + + P 
Sbjct: 289 LSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPN 348

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            V Y  +I GLC    + EA+ +   M    + P+  TY+TII  F K  DL  A +  N
Sbjct: 349 VVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWN 408

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M      P    Y  ++D LC       A  L+ ++       T + +   IK  C  G
Sbjct: 409 KMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAG 468

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
            V  AM    QM +     +IR Y +    +  +N F
Sbjct: 469 RVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAF 505



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 147/316 (46%), Gaps = 4/316 (1%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G V DAV +   M    +  ++  YN+L++ L    + D    +++ ++      NV T 
Sbjct: 328 GRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTY 387

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S +I G  +   L  A     +       P+VV    ++   C++   + A  L   M+ 
Sbjct: 388 STIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMIS 447

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  P   ++N  I GLC AG +E A+   + M ++   P+  TY+ L  G    +    
Sbjct: 448 DGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFRE 507

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  +I++L  +  + D VTY  ++ G+   G  ++ L+L   ML  G KL+ I  +  ++
Sbjct: 508 ACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVN 567

Query: 247 SMCKSGRIDEALGLLYEMEAVG-LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           + CK G++  A+ +L  + A    + D++T++I++ G+C      +A+   +EM  + I 
Sbjct: 568 AYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIF 627

Query: 306 PNSFAHGAILLGLCEK 321
           PN      ++ G   K
Sbjct: 628 PNIATWNVLVRGFFSK 643


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 202/371 (54%)

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           +E D   ++IL   F  L ++  A+ V+ K++  G +PD VT++ LI G C        +
Sbjct: 115 IERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAM 174

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           +  + M++ G++ N+  Y+ ++   CK G+   A+GLL +M+  G +PD+V Y+ +I GL
Sbjct: 175 EFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGL 234

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CK   V +A+ +++E+  K + P+ F +  ++ GLC  +   EA   F+ ++  N + DV
Sbjct: 235 CKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V +NI++D   K G + EA  + + +IEK + P+  T+NSL+ G+C   KV +AR + D 
Sbjct: 295 VTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDA 354

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +   G  P+ V+Y   +N YC+   I     L  EM  + + P    Y  +I GLC+  +
Sbjct: 355 MITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGR 414

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
             EA +L +DM   G +PD +T   ++ S CK   L  A +L   M    L+P   TY+I
Sbjct: 415 HCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDI 474

Query: 524 LIDGLCVNGDL 534
           LI  +  +G +
Sbjct: 475 LIRAMYKSGKI 485



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 205/367 (55%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           V   N +++ + +L   + A  +   ++K G  PDA +++ LI+GLC       A+EF +
Sbjct: 119 VFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFD 178

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           +M   G +P+  TY+ + KGF  + + + A  +++K+   G  PDIV Y  +I G C+  
Sbjct: 179 EMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDR 238

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            V E L +   +  +G + +V  YS+L+  +C S + +EA  L  EM ++ + PD+VT++
Sbjct: 239 LVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFN 298

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           IL+  LCK+  + +A  +   M  K + PN   + +++ G C +  + EARM FD++I  
Sbjct: 299 ILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITK 358

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
            C+ +VV YNI+I+GY K   I EA +L+ ++  + + P+   +N+LI G C+ G+  +A
Sbjct: 359 GCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEA 418

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
           R L   ++  G  P  VT T  +++ C+ G +   L L + M+   + P  VTY ++I+ 
Sbjct: 419 RELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRA 478

Query: 458 LCKQWKL 464
           + K  K+
Sbjct: 479 MYKSGKI 485



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 213/422 (50%)

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           C  + ++DA+        K   P +V  + ++S   ++        L   +    +  D 
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
           F +NILI+       ++ A      + + G EPDA+T+S L  G     + + A +   +
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           ++  G  P++ TY  +I G+C+IG     + L + M   G + +++ Y+ ++  +CK   
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           + EAL +  E++  G++PD+ TYSIL+ GLC  D+  +A  L+NEM S  I P+      
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++  LC++ M++EA+     +I      +   YN +++GY     + EA  ++  +I K 
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
             P++V++N LI G+CK  ++ +AR L D +   GL P+   Y T ++  C+ G      
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            L ++M+ +   P  VT T+++  LCK   L  A++L   M    + P+ +TY+ +IR+ 
Sbjct: 420 ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAM 479

Query: 494 CK 495
            K
Sbjct: 480 YK 481



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 184/341 (53%), Gaps = 1/341 (0%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           IK+   P  V T S +I+GLC + +   A+ F  E     + P++ + N I+  +CK+G 
Sbjct: 146 IKLGFEPDAV-TFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGK 204

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
             VA GL   M K G  PD   YN +I GLC    + EAL+  +++   GV PD  TYSI
Sbjct: 205 TTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSI 264

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L  G     Q   A  +  +++     PD+VT+ +L+   C+ G + E   + ++M+ +G
Sbjct: 265 LMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKG 324

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            + N   Y+ L++  C   ++ EA  +   M   G  P++V+Y+ILI G CK  ++ +A 
Sbjct: 325 VEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEAR 384

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           +L++EM  + + PN+F +  ++ GLC+     EAR  F  +    C  D+V   I++D  
Sbjct: 385 ELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSL 444

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
            KLG +  A++L+R + +  + P++VT++ LI    K+GK+
Sbjct: 445 CKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 204/428 (47%)

Query: 144 CIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
           C   ++E+AL   N M      P  + +  L      +        + +++ +   + D+
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
             + +LI  + ++  V+    +   ++  GF+ + + +S L++ +C   +   A+    E
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M A G +P+L TY+ +I+G CK  K   A+ L  +M      P+   +  I+ GLC+  +
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           ++EA   F  +       DV  Y+I++ G        EA  L+ +++   I P +VTFN 
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L+   CK G +++A+ ++  +   G+EP+  TY + MN YC +  +     +   M TK 
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             P  V+Y ++I G CK  ++ EA +L ++M   G+ P+   YNT+I   C+     +A 
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           +L   M      P   T  IL+D LC  G L NA  L  ++Q+  +    V Y  +I+A 
Sbjct: 420 ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAM 479

Query: 564 CAEGDVHK 571
              G +++
Sbjct: 480 YKSGKIYR 487



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 202/423 (47%), Gaps = 3/423 (0%)

Query: 12  VHDAVFVIAKM---KELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           + DA+F    M     L   V      S L  ++H   +  L   I++    R+V+  +I
Sbjct: 65  IEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+   +  R+  A   L +     F P  V+ +++++  C       A   F  M+  G
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P+  +YN +I G C  G    A+     M + G  PD + Y+ +  G      +S A 
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            +  ++  KG  PD+ TY++L+ G C     EE   L   M+S     +V+ +++L+  +
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL 304

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK G + EA G++  M   G++P+  TY+ L+ G C Q+KV +A  +++ M +K   PN 
Sbjct: 305 CKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNV 364

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
            ++  ++ G C+ + I EAR  FD +     I +   YN +I G  + G   EA +L++ 
Sbjct: 365 VSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKD 424

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  +  SP +VT   L+   CK G + +A RL   ++   L+P+ VTY   + A  + G 
Sbjct: 425 MQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGK 484

Query: 429 IQR 431
           I R
Sbjct: 485 IYR 487



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 202/411 (49%)

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L+ I  A      ++ K   P IV +  L+    +I +    L L + +     + +V  
Sbjct: 62  LTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFH 121

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           +++L++   +  R+D A  +L ++  +G +PD VT+S LI GLC +DK  +A++ ++EM 
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +    PN   +  I+ G C+    T A      +  +    D+V+YN +IDG  K   + 
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+ ++ ++  K + P + T++ L++G C + +  +A  L + +    + P  VT+   +
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C+EG +     +++ M  K + P + TY  ++ G C Q K+ EA  + + M   G  
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ ++YN +I  +CK + + +A +L ++M    L P +  YN LI GLC  G    A  L
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAREL 421

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
              +Q    S   V  T ++ + C  G +  A+  F  M +   + ++  Y
Sbjct: 422 FKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTY 472



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 193/429 (44%), Gaps = 20/429 (4%)

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C + N+E+ L     M+ +     ++ +  LLS++ +       L L   +E + ++ D+
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
             ++ILI    +  +V  A  +  ++      P++    +++ GLC ++    A  +FD 
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++ S    ++  YN +I G+ K+G    AV L +++ +    P IV +N++I G CK+  
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V++A  +   IK  G+ P   TY+  M+  C     +   AL  EM +  I P  VT+ +
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           ++  LCK+  L EA  +++ M   GV P+  TYN+++  +C    + +A  + + M    
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
             P   +YNILI+G C    +  A  L   +    +      Y T+I   C  G   +A 
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             F            +D        M + G  PD   C ++L +  + G L +   L   
Sbjct: 420 ELF------------KD--------MQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRA 459

Query: 634 MIKSGLLPD 642
           M  S L P+
Sbjct: 460 MQDSCLKPN 468



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 141/307 (45%), Gaps = 20/307 (6%)

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
           +DV  +NI+I+ + +L  +  A  +  ++I+    P  VTF+SLI G C   K A A   
Sbjct: 117 RDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEF 176

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            D +   G +P+  TY T +  +C+ G     + LL++M+     P  V Y  +I GLCK
Sbjct: 177 FDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCK 236

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
              + EA+ +  ++   GV PD  TY+ ++   C      +A  L N+M   N+ P   T
Sbjct: 237 DRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVT 296

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           +NIL+D LC  G L  A  ++  + E  +      Y +++  +C +  V +A   F  M+
Sbjct: 297 FNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMI 356

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
            KG   ++  Y       +L NG+   Q I E                EL   M   GL+
Sbjct: 357 TKGCMPNVVSYN------ILINGYCKAQRIDEAR--------------ELFDEMSFRGLI 396

Query: 641 PDKFLIN 647
           P+ F  N
Sbjct: 397 PNTFNYN 403



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 32/203 (15%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + GM+ +A  +I  M E  ++ +  TYNSL+                             
Sbjct: 306 KEGMLSEAQGIIKIMIEKGVEPNYATYNSLM----------------------------- 336

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
              +G C Q+++ +A +       K   P+VVS N +++ YCK    + A+ LF  M   
Sbjct: 337 ---NGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFR 393

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           GL P+ F+YN LI GLC AG   EA E   DM   G  PD +T +IL      L  +  A
Sbjct: 394 GLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNA 453

Query: 188 WKVIQKLLIKGSDPDIVTYTVLI 210
            ++ + +      P++VTY +LI
Sbjct: 454 LRLFRAMQDSCLKPNLVTYDILI 476


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/568 (26%), Positives = 279/568 (49%), Gaps = 17/568 (2%)

Query: 20  AKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR-----NVYTNSIVIDGLC 74
           A +  L  ++S      +   L+  D+ W+L+  +    +PR     +V+T + ++D   
Sbjct: 74  AALDRLRREISTDAVVKIFQCLKDADLAWELFQCL---SSPRFGFQHSVHTGNALLDVFA 130

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK-YGLHPDA 133
           +  R ++A   L+      F P V + N +++ YC     E A  +   M + +G+ P  
Sbjct: 131 RTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSL 190

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
            ++N+++HGLC +G +  A++    + R  +   A T+SIL  G      +  A  + Q+
Sbjct: 191 KTHNLVLHGLCKSGKVLAAMDHFEAV-RRSMPVSAATFSILINGLVKAGMMIQAHSLAQE 249

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
               G   DI TYT ++    +   ++E + L E + + G    +  Y+ LL+ +CK GR
Sbjct: 250 TTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGR 309

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           ++EA+ LL ++   G  PD+VTY+ LI GL K+ +  +A +L+ EM S+ ++ ++  + A
Sbjct: 310 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTA 369

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++ GL +   I +A   + ++    C+ DVV  + MIDG  K G IG AV++++ +  + 
Sbjct: 370 LIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 429

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           ++P+ V +++LI+G CK  K+  A  +L  +K     P  +TY   ++  C+ G+++   
Sbjct: 430 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 489

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           A   EM      P   TY ++I GLCK      A  +L+DM     +  +  Y++++   
Sbjct: 490 AFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM-----SSSRFVYSSLVDGL 544

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           CK   L     L ++M    +   S T   LI  LC    +  A  L  ++++  +    
Sbjct: 545 CKSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP-HP 602

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
            AY +II A    G V++    + +M  
Sbjct: 603 YAYNSIISALIKSGKVNEGQAVYQEMTR 630



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 239/494 (48%), Gaps = 13/494 (2%)

Query: 13  HDAVFVIAKMKE-LDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPRNVYTNSI 68
            +A  VI +M+E   +  S++T+N +L+ L  +       D ++ ++ S  P +  T SI
Sbjct: 171 EEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRS-MPVSAATFSI 229

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+GL +   +  A    QET        + +  AI++   K    + A  L   +   G
Sbjct: 230 LINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANG 289

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P   +YN L++GLC  G +EEA++    +  +G  PD +TY+ L  G     +   A+
Sbjct: 290 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 349

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           K+ +++  +G   D V YT LI G  Q G + +   + + M S G   +V+  S ++  +
Sbjct: 350 KLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 409

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
            K+GRI  A+ +   MEA GL P+ V YS LI GLCK  K+  A+++  +M     +P++
Sbjct: 410 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 469

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  ++ GLC+   +  AR +FD ++ + C  DV  YNI+I G  K GN   A  +   
Sbjct: 470 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDD 529

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +     S S   ++SL+ G CK+GK+     L   ++  G+  S  T T  +   C+   
Sbjct: 530 M-----SSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQ-TRTRLIFHLCKANR 583

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +   ++L   +  + + P    Y  +I  L K  K+ E   + ++M      PD++TYN 
Sbjct: 584 VDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNA 641

Query: 489 IIRSFCKCKDLRKA 502
           ++        + +A
Sbjct: 642 LLNGMIGANRMDRA 655



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 187/387 (48%), Gaps = 6/387 (1%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLK-LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
           PD+ T+ VLI GYC     EE    +RE+    G   ++  ++++L  +CKSG++   L 
Sbjct: 152 PDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKV---LA 208

Query: 260 LLYEMEAV--GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
            +   EAV   +     T+SILI GL K   + +A  L  E  +   + +   + AI+  
Sbjct: 209 AMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNW 268

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           L + + I EA    + +  + C   +  YN +++G  K+G + EA+ L R++++   +P 
Sbjct: 269 LAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 328

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           +VT+ SLI G  K  +  +A +L   +   GL    V YT  +    + G I +  ++ +
Sbjct: 329 VVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYK 388

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            M +    P  VT + +I GL K  ++  AV++ + M   G+ P+++ Y+ +I   CK +
Sbjct: 389 TMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 448

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            +  A ++L QM      P + TYNILIDGLC +GD++ A      + E         Y 
Sbjct: 449 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYN 508

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            +I   C  G+   A      M    F
Sbjct: 509 ILISGLCKAGNTDAACGVLDDMSSSRF 535



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 208/443 (46%), Gaps = 11/443 (2%)

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK--GSDPDIVTYTVLI 210
           +E   D  R  +  DA+      K F  L     AW++ Q L     G    + T   L+
Sbjct: 72  IEAALDRLRREISTDAVV-----KIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALL 126

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA-VGL 269
             + +     E   L +  L+  F+ +V  ++VL++  C +   +EA  ++ EME   G+
Sbjct: 127 DVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGV 186

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL-GLCEKEMITEAR 328
            P L T+++++ GLCK  KV  A+  +  +  +R  P S A  +IL+ GL +  M+ +A 
Sbjct: 187 APSLKTHNLVLHGLCKSGKVLAAMDHFEAV--RRSMPVSAATFSILINGLVKAGMMIQAH 244

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
                   + C  D+  Y  +++   K   I EAV L  ++     +P+I T+N+L+ G 
Sbjct: 245 SLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGL 304

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           CK G++ +A  LL  I  +G  P  VTYT+ ++   +E        L +EM ++ +    
Sbjct: 305 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDT 364

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           V YT +I+GL +  K+ +A  + + M   G  PD +T +T+I    K   +  A ++   
Sbjct: 365 VCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKS 424

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    L P    Y+ LI GLC    +  A  +L  +++   +   + Y  +I   C  GD
Sbjct: 425 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 484

Query: 569 VHKAMTFFCQMVEKGFEISIRDY 591
           V  A  FF +M+E G +  +  Y
Sbjct: 485 VEAARAFFDEMLEAGCKPDVYTY 507



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 186/440 (42%), Gaps = 40/440 (9%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           ++   + +AV ++ K+       +I TYN+LL                            
Sbjct: 270 AKNKKIQEAVALMEKITANGCTPTIATYNALL---------------------------- 301

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
               +GLC+  RL++AI  L++       P VV+  +++    K   +  A  LF  M  
Sbjct: 302 ----NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAS 357

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL  D   Y  LI GL   G + +A      M  HG  PD +T S +  G     +I  
Sbjct: 358 RGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGA 417

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A ++ + +  +G  P+ V Y+ LI G C+   ++  L++   M       + I Y++L+ 
Sbjct: 418 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID 477

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CKSG ++ A     EM   G KPD+ TY+ILI GLCK      A  + ++M S R   
Sbjct: 478 GLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR--- 534

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
             F + +++ GLC+   +    M F  +  S  + +      +I    K   + EAV L+
Sbjct: 535 --FVYSSLVDGLCKSGKLEGGCMLFHEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLF 591

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
              I K   P    +NS+I    K+GKV + + +   +     +P  VTY   +N     
Sbjct: 592 -NAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNALLNGMIGA 649

Query: 427 GNIQRLLALLQEMETKAIGP 446
             + R      EM  +   P
Sbjct: 650 NRMDRAHYYYLEMTGRGYVP 669



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 191/416 (45%), Gaps = 22/416 (5%)

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           GF+ +V   + LL    ++ R  EA  LL    A   +PD+ T+++LI G C   +  +A
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEA 173

Query: 293 IQLYNEMCSK-RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
             +  EM     ++P+   H  +L GLC+   +  A  +F+++  S  +     ++I+I+
Sbjct: 174 FAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVS-AATFSILIN 232

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G VK G + +A  L ++      +  I T+ +++    KN K+ +A  L++ I  +G  P
Sbjct: 233 GLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTP 292

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           +  TY   +N  C+ G ++  + LL+++      P  VTYT +I GL K+ +  EA +L 
Sbjct: 293 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 352

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
           ++M   G+  D + Y  +IR   +   + +A  +   M  H   P   T + +IDGL   
Sbjct: 353 KEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 412

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           G +  A  +  S++   ++  +V Y+ +I   C    +  A+    QM            
Sbjct: 413 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM------------ 460

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            K  FC        PD     +++    + GD+ +       M+++G  PD +  N
Sbjct: 461 -KKAFCT-------PDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYN 508



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 119/246 (48%), Gaps = 9/246 (3%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S +I GLC+  ++  A+  L +       P  ++ N ++   CK G  E A+  F  ML+
Sbjct: 438 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLE 497

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD ++YNILI GLC AG+ + A    +DM           YS L  G     ++ G
Sbjct: 498 AGCKPDVYTYNILISGLCKAGNTDAACGVLDDM-----SSSRFVYSSLVDGLCKSGKLEG 552

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
              +  ++   G   +  T T LI   C+   V+E + L   +  +G   +  AY+ ++S
Sbjct: 553 GCMLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP-HPYAYNSIIS 610

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR-IS 305
           ++ KSG+++E   +  EM     KPD VTY+ L+ G+   +++ +A   Y EM  +  + 
Sbjct: 611 ALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVP 669

Query: 306 PNSFAH 311
           P S  H
Sbjct: 670 PVSILH 675


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 217/400 (54%), Gaps = 8/400 (2%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCL-MLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           S  + N ++   C  G     K +  L +L+    P+A +YN +I G C  G ++  +E 
Sbjct: 115 STTTFNIMLRHLCTAG-----KPVRALELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEI 169

Query: 156 TNDMG-RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTYTVLICGY 213
             +M  R G+ PD  TY+ +  G+  + ++  A KV  ++L +G  +P+ V Y  LI GY
Sbjct: 170 MREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGY 229

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C  GN+E  L+ R  M+ +G  + V  Y++ + ++   GR  EA  L+ EM   GL PD 
Sbjct: 230 CDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDA 289

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            TY+ILI G CK+ K  KA++++  M  K I      + +++  L  K M+ E    F+ 
Sbjct: 290 FTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFND 349

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
            +      D+ +YN +I+ +   G++  A ++  ++ +KRI+P  VT+N+L+ G C  G+
Sbjct: 350 AVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGR 409

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + +AR L++ +   G++P  V+Y T ++ Y  +G+I+  + +  EM  K   PT +TY  
Sbjct: 410 LDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNA 469

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           +IKGLC   +  +A  L+++M   G+TPD  TY ++I   
Sbjct: 470 MIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGL 509



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 210/411 (51%), Gaps = 26/411 (6%)

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
             L+   ++++L  +C +G+   AL LL +M +    P+ VTY+ +I G C + +V   I
Sbjct: 112 LPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGI 167

Query: 294 QLYNEMCSKR-ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMID 351
           ++  EM  +  I+P+ + +  ++ G C+   + +A   FD ++    ++ + V+YN +I 
Sbjct: 168 EIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIG 227

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           GY   GN+  A++   +++++ +S ++ T+N  ++     G+ A+A  L++ +   GL P
Sbjct: 228 GYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAP 287

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
            A TY   +N YC+EG  ++ + + + M  K I  T VTYT +I  L  +  +QE  +L 
Sbjct: 288 DAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLF 347

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            D    G+ PD   YN +I S C   D+ +AF+++ +M    + P   TYN L+ GLC+ 
Sbjct: 348 NDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLL 407

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           G L  A  L+  + +  I    V+Y T+I  +  +GD+  A+    +M+ KGF  ++  Y
Sbjct: 408 GRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTY 467

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                 + L NG                QGGD     +L   M+ +G+ PD
Sbjct: 468 NAMIKGLCL-NG----------------QGGD---AEDLVKEMVGNGITPD 498



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 219/424 (51%), Gaps = 9/424 (2%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           A  + A +  L L +S  T+N +L +L          + ++   +P N  T + VI G C
Sbjct: 100 AFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPSP-NAVTYNTVIAGFC 158

Query: 75  QQSRLQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LH 130
            + R+Q  I  ++E   +E G   P   +   ++S +CK+G  E A  +F  ML  G + 
Sbjct: 159 ARGRVQAGIEIMREM--RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVE 216

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P+A  YN LI G C  G++E AL +  +M   GV     TY++      +  + + A  +
Sbjct: 217 PNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHAL 276

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           ++++  KG  PD  TY +LI GYC+ G  ++ +K+ EVM+ +G +  V+ Y+ L+ ++  
Sbjct: 277 VEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSM 336

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G + E   L  +    G++PDL  Y+ LI   C    + +A ++  EM  KRI+P+   
Sbjct: 337 KGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVT 396

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ GLC    + EAR   + +       D+V YN +I GY   G+I +AV++  +++
Sbjct: 397 YNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMM 456

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            K  +P+++T+N++I G C NG+  DA  L+  +  +G+ P   TY + +     E   +
Sbjct: 457 GKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTED--E 514

Query: 431 RLLA 434
           RL A
Sbjct: 515 RLAA 518



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 203/391 (51%), Gaps = 4/391 (1%)

Query: 180 LLSQISGAWKVIQ--KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LREVMLSQGFKL 236
           +L  +  A K ++  +LL +   P+ VTY  +I G+C  G V+ G++ +RE+    G   
Sbjct: 122 MLRHLCTAGKPVRALELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAP 181

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG-LKPDLVTYSILIRGLCKQDKVHKAIQL 295
           +   Y+ ++S  CK G++++A  +  EM   G ++P+ V Y+ LI G C Q  +  A++ 
Sbjct: 182 DKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRY 241

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
             EM  + +S     +   +  L  +    EA    + +       D   YNI+I+GY K
Sbjct: 242 RGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCK 301

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G   +A++++  ++ K I  ++VT+ SLI+     G V +  RL +     G+ P    
Sbjct: 302 EGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFM 361

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y   +N++C  G++ R   ++ EME K I P  VTY  +++GLC   +L EA  L+E+M 
Sbjct: 362 YNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMT 421

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G+ PD ++YNT+I  +    D++ A ++ ++M      PT  TYN +I GLC+NG   
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGG 481

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           +A+ L+  +  + I+     Y ++I+    E
Sbjct: 482 DAEDLVKEMVGNGITPDDSTYISLIEGLTTE 512



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 152/287 (52%), Gaps = 5/287 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y   G +  A+    +M +  + +++ TYN  ++ L    R  +    L +++       
Sbjct: 229 YCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEA-HALVEEMGEKGLAP 287

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + +T +I+I+G C++ + + A+   +   GK    +VV+  +++      G  +    LF
Sbjct: 288 DAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLF 347

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              ++ G+ PD F YN LI+  C  G M+ A E   +M +  + PD +TY+ L +G  LL
Sbjct: 348 NDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLL 407

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  +I+++  +G  PD+V+Y  LI GY   G++++ +K+R+ M+ +GF   ++ Y
Sbjct: 408 GRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTY 467

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           + ++  +C +G+  +A  L+ EM   G+ PD  TY  LI GL  +D+
Sbjct: 468 NAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDE 514



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 134/303 (44%), Gaps = 21/303 (6%)

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+  +   R+  S  TFN ++   C  GK   A  LL  +      P+AVTY T + 
Sbjct: 100 AFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIA 155

Query: 422 AYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-V 479
            +C  G +Q  + +++EM E   I P   TY  VI G CK  K+++A ++ ++M   G V
Sbjct: 156 GFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKV 215

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+ + YN +I  +C   +L  A +   +M    +  T ATYN+ +  L + G    A  
Sbjct: 216 EPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHA 275

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------ 593
           L+  + E  ++     Y  +I  +C EG   KAM  F  MV KG   ++  YT       
Sbjct: 276 LVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALS 335

Query: 594 ---------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                      F   +  G  PD  +   ++ +   GGD+   FE+   M K  + PD  
Sbjct: 336 MKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDV 395

Query: 645 LIN 647
             N
Sbjct: 396 TYN 398



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 156/328 (47%), Gaps = 18/328 (5%)

Query: 6   YSRTGMVHDAVFVIAKM-KELDLKVSIQTYNSLLYN----------LRHTDIMWDLYDDI 54
           + + G V DA  V  +M  E  ++ +   YN+L+            LR+   M D     
Sbjct: 193 WCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDR---- 248

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
            VS T   V T ++ +  L  + R  +A   ++E   K   P   + N +++ YCK G  
Sbjct: 249 GVSMT---VATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKE 305

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           + A  +F +M+  G+     +Y  LIH L + G ++E     ND  R G+ PD   Y+ L
Sbjct: 306 KKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNAL 365

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
                    +  A++++ ++  K   PD VTY  L+ G C +G ++E   L E M  +G 
Sbjct: 366 INSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGI 425

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           + ++++Y+ L+S     G I +A+ +  EM   G  P L+TY+ +I+GLC   +   A  
Sbjct: 426 QPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAED 485

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKE 322
           L  EM    I+P+   + +++ GL  ++
Sbjct: 486 LVKEMVGNGITPDDSTYISLIEGLTTED 513


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 183/689 (26%), Positives = 304/689 (44%), Gaps = 87/689 (12%)

Query: 5   VYSRTGMVHDAV--FVIAKMKELDLKVSIQTYNSLLYN-LRHTD---IMWDLYDDIKVSE 58
           V ++ G V DA+  F   + +   L  S+  YN LL + LRH     + W LY D+  + 
Sbjct: 87  VLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSW-LYSDMLAAR 145

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
                YT +++I  LC+      A+                                   
Sbjct: 146 VAPQTYTFNLLIHSLCESRAFDHAL----------------------------------- 170

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            LF  M + G  P+ F+  IL+ GLC AG +++ALE  N+     +  + + Y+ L   F
Sbjct: 171 QLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRI-ANRVVYNTLVSRF 229

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQGFKL- 236
                 + A ++++++   G  PD+VT+   I   C+ G V E  ++ R++ +     L 
Sbjct: 230 CREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLP 289

Query: 237 --NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             NV+ ++++L   CK G + +A GL+  M+ VG    L  Y+I + GL +  ++ +A  
Sbjct: 290 RPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARL 349

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           + +EM +K I PN++ +  ++ GLC   M+++AR   D ++ +    D V Y+ ++ GY 
Sbjct: 350 VLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYC 409

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
             G + EA  +  ++I     P+  T N+L++   K G+  +A  +L  +     +P  V
Sbjct: 410 SRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTV 469

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH------------------------VT 450
           T    +N  C  G + +   ++ EM T   GPT                         +T
Sbjct: 470 TCNIVVNGLCRNGELDKASEIVSEMWTN--GPTSLDKGNSFASLINSIHNVSNCLPDGIT 527

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           YT +I GLCK  +L+EA +   +M    + PD +TY+T I SFCK   +  AF++L  M 
Sbjct: 528 YTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDME 587

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
            +    T  TYN LI GL  N  +     L   ++E  IS     Y  II   C  G   
Sbjct: 588 RNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAK 647

Query: 571 KAMTFFCQMVEKG-------FEISIRDYTKSFFCMMLSNGFPPDQEIC-------EVMLI 616
            A++   +M++KG       F+I I+ ++KS    +    F     IC        +M  
Sbjct: 648 DAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEALYSLMFN 707

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
               GG L    EL  V +   L    F+
Sbjct: 708 ELLAGGQLSEAKELFEVSLDRYLTLKNFM 736



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 142/546 (26%), Positives = 243/546 (44%), Gaps = 32/546 (5%)

Query: 8   RTGMVHDAVFVIAKMK---ELDL-KVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETP 60
           R G V +A  +   M+   EL L + ++ T+N +L       +M D   L + +K     
Sbjct: 266 RAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNF 325

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            ++   +I + GL +   L +A L L E   K   P+  + N +M   C+      A+GL
Sbjct: 326 DSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGL 385

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             LM++ G++PD  +Y+ L+HG C  G + EA    ++M R+G +P+  T + L      
Sbjct: 386 MDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWK 445

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL---- 236
             +   A +++QK+  K   PD VT  +++ G C+ G +++  ++   M + G       
Sbjct: 446 EGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKG 505

Query: 237 -----------NV-------IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
                      NV       I Y+ L++ +CK GR++EA     EM A  L+PD VTY  
Sbjct: 506 NSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDT 565

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
            I   CKQ K+  A ++  +M     S     + A++LGL     I E     D +    
Sbjct: 566 FIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKG 625

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              D+  YN +I    + G   +A+ L  ++++K ISP++ +F  LI  F K+     A 
Sbjct: 626 ISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVAC 685

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            L + + L+        Y+   N     G +     L +    + +   +  Y  +I  L
Sbjct: 686 ELFE-VALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARL 744

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE--P 516
           C+  +L +A  LL  +   G   D  ++  +I    K  + R+A +L  +M    LE  P
Sbjct: 745 CQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMMELELEDRP 804

Query: 517 TSATYN 522
              TY+
Sbjct: 805 VDRTYS 810



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 201/426 (47%), Gaps = 29/426 (6%)

Query: 239 IAYSVLLSS---MCKSGRIDEALGLLYEMEA--VGLKPDLVTYSILIRGLCKQDKVHKAI 293
           IA+  L+S    + + G +D+A+     + A    L P L  Y++L+R   +  +     
Sbjct: 76  IAHPSLISMVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVS 135

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            LY++M + R++P ++    ++  LCE      A   F+ +    C  +     I++ G 
Sbjct: 136 WLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGL 195

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            + G + +A++L       RI+  +V +N+L+  FC+     +A RL++ +   G+ P  
Sbjct: 196 CRAGLVKQALELVNNNNSCRIANRVV-YNTLVSRFCREEMNNEAERLVERMNELGVLPDV 254

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKA-IG---PTHVTYTVVIKGLCKQWKLQEAVQ 469
           VT+ + ++A C  G +     + ++M+  A +G   P  VT+ +++KG CK   + +A  
Sbjct: 255 VTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARG 314

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           L+E M  +G       YN  +    +  +L +A  +L++M    +EP + TYNI++DGLC
Sbjct: 315 LVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLC 374

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            N  L +A  L+  +  + +    VAY+T++  +C+ G V +A +   +M+  G + +  
Sbjct: 375 RNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNT- 433

Query: 590 DYT-----------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
            YT                 +     M    + PD   C +++    + G+L    E+ +
Sbjct: 434 -YTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVS 492

Query: 633 VMIKSG 638
            M  +G
Sbjct: 493 EMWTNG 498



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 149/342 (43%), Gaps = 31/342 (9%)

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           R  F SL  S     + LYN+++   ++    G    LY  ++  R++P   TFN LI+ 
Sbjct: 105 RAQFPSLSPS-----LPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHS 159

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            C++     A +L + +   G  P+  T    +   C  G +++ L L+    +  I   
Sbjct: 160 LCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIA-N 218

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            V Y  ++   C++    EA +L+E M  +GV PD +T+N+ I + C+   + +A ++  
Sbjct: 219 RVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFR 278

Query: 508 QMWLHN----LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            M +        P   T+N+++ G C +G + +A  L+ ++++     +   Y   +   
Sbjct: 279 DMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGL 338

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQ 608
              G++ +A     +MV KG E +   Y                +    +M+ NG  PD 
Sbjct: 339 LRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDT 398

Query: 609 EICEVMLIAFHQGGDLGSVFELAAV---MIKSGLLPDKFLIN 647
                +L   H     G VFE  +V   MI++G  P+ +  N
Sbjct: 399 VAYSTLL---HGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCN 437


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 163/594 (27%), Positives = 279/594 (46%), Gaps = 13/594 (2%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDL----YDDIKVSETP 60
            Y++ GM   AV    +MKE D +  + TYN +L  +   ++ + L    Y+++      
Sbjct: 136 AYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCS 195

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N+YT  I++DGL ++ R  DA     +  G+   P+ V+   ++S  C+ G A+ A+ L
Sbjct: 196 PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKL 255

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M   G +PD+ ++N L+ G C  G M EA E      + G       YS L  G   
Sbjct: 256 FYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFR 315

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             + + A+++   +L K   PDI+ YT+LI G  + G +E+ LKL   M S+G   +   
Sbjct: 316 ARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYC 375

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ ++ ++C  G ++E   L  EM      PD  T++ILI  +C+   V +A +++ E+ 
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIE 435

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY----NIMIDGYVKL 356
               SP+     A++ GLC+   + EAR+    + +       +      N   D  V+ 
Sbjct: 436 KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVES 495

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G+I +A +      +   SP IV++N LI GFC+ G +  A +LL+ ++L GL P +VTY
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL-LEDMY 475
            T +N     G  +    L    +     P    Y  ++   C++ K+  A  L ++ + 
Sbjct: 556 NTLINGLHRVGREEEAFKLFYAKDDFRHSP--AVYRSLMTWSCRKRKVLVAFNLWMKYLK 613

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            I    D+ T N I + F K  +  +A + L ++     E T   Y I + GLC +G   
Sbjct: 614 KISCLDDE-TANEIEQCF-KEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFH 671

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            A  +   L+E  I +T  +   +I   C    +  A+  F   ++  F++  R
Sbjct: 672 EALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPR 725



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 151/583 (25%), Positives = 267/583 (45%), Gaps = 53/583 (9%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAG--KEFG--PSVVS 100
           D+ W   +++K      + Y   ++I    +    + A+    E+ G  KEF   P V +
Sbjct: 109 DLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAV----ESFGRMKEFDCRPDVFT 164

Query: 101 LNAIMSRYCKLG-FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
            N I+    +   F  +A  ++  MLK    P+ +++ IL+ GL   G   +A +  +DM
Sbjct: 165 YNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDM 224

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              G+ P+ +TY+IL  G         A K+  ++   G+ PD V +  L+ G+C++G +
Sbjct: 225 TGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRM 284

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            E  +L  +    GF L +  YS L+  + ++ R  +A  L   M    +KPD++ Y+IL
Sbjct: 285 VEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTIL 344

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I+GL K  K+  A++L + M SK ISP+++ + A++  LC + ++ E R     +  +  
Sbjct: 345 IQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETES 404

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             D   + I+I    + G + EA +++ ++ +   SPS+ TFN+LI G CK+G++ +AR 
Sbjct: 405 FPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARL 464

Query: 400 LLDTIKLHGLEPSAV------TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           LL  +++    P+++      +     +   E G+I +    L         P  V+Y V
Sbjct: 465 LLHKMEVG--RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNV 522

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I G C+   +  A++LL  + + G++PD +TYNT+I    +     +AF+L       +
Sbjct: 523 LINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAK--DD 580

Query: 514 LEPTSATYNILIDGLCVNGD-----------LKNADCL---------------------- 540
              + A Y  L+   C               LK   CL                      
Sbjct: 581 FRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALR 640

Query: 541 -LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            L+ L      LT   YT  +   C  G  H+A+  F  + EK
Sbjct: 641 RLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREK 683



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 217/473 (45%), Gaps = 22/473 (4%)

Query: 180 LLSQISGA---WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           +LS+ +G    W+ +++L   G   D   + VLI  Y ++G  E+ ++    M     + 
Sbjct: 101 MLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRP 160

Query: 237 NVIAYSVLLSSMCKSGRIDE-ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           +V  Y+V+L  M +       A  +  EM      P+L T+ IL+ GL K+ +   A ++
Sbjct: 161 DVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKM 220

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +++M  + ISPN   +  ++ GLC++    +AR  F  +  S    D V +N ++DG+ K
Sbjct: 221 FDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCK 280

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           LG + EA +L R   +      +  ++SLI G  +  +   A  L   +    ++P  + 
Sbjct: 281 LGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIIL 340

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           YT  +    + G I+  L LL  M +K I P    Y  VIK LC +  L+E   L  +M 
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS 400

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
                PD  T+  +I S C+   +R+A ++  ++      P+ AT+N LIDGLC +G+LK
Sbjct: 401 ETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELK 460

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI-SIRDYTKS 594
            A  LL     H + + + A   +  +H            F  MVE G  + + RD    
Sbjct: 461 EARLLL-----HKMEVGRPASLFLRLSHSGNRS-------FDTMVESGSILKAYRD---- 504

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                   G  PD     V++  F + GD+    +L  V+   GL PD    N
Sbjct: 505 -LAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYN 556


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 236/468 (50%), Gaps = 3/468 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH--GVEPDAITYSILAKGFHLL 181
           M + G+ PD  SYN ++  LC     + AL+  + M +   G  P+ +TY+ +  G    
Sbjct: 181 MPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFRE 240

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++S A  +  +++ +G  PD+VTYT +I   C+   +++   +   M+S GF+ N + Y
Sbjct: 241 GEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTY 300

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++     SG+  E  G+  EM + GL P++VT +  +  LCK  K  +A + ++ M +
Sbjct: 301 NCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAA 360

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   PN   +  +L G   +    +    F+S+  +  + D  ++NI+ID Y K G + E
Sbjct: 361 KGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDE 420

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            + ++ Q+ E+ + P   T+  +I  F + G++ADA    + +   GL+P  + Y + + 
Sbjct: 421 TMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQ 480

Query: 422 AYCEEGNIQRLLALLQEMETKAIG-PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
            +C  GN+ +   L+ EM ++ I  P  V +  +I  LCK+ ++ EA  + + +  IG  
Sbjct: 481 GFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGER 540

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD IT+N++I  +     + KAF +L+ M    +EP   +YN LIDG C NG + +   L
Sbjct: 541 PDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLIL 600

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
              +    +  T + Y  I+     +G    A     +M+E G  + I
Sbjct: 601 FGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDI 648



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 147/576 (25%), Positives = 279/576 (48%), Gaps = 6/576 (1%)

Query: 30  SIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           ++ TYN++++ L R  ++    +L+ ++       +V T + +ID LC+   +  A L L
Sbjct: 226 NVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVL 285

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
           ++     F P+ V+ N ++  Y   G  +   G+F  M   GL P+  + N  +  LC  
Sbjct: 286 RQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKH 345

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G  +EA EF + M   G +P+ +TYS+L  G+           +   +   G   D   +
Sbjct: 346 GKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVF 405

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            ++I  Y + G ++E + +   M  QG   +   Y +++++  + GR+ +A+    +M A
Sbjct: 406 NIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIA 465

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS-PNSFAHGAILLGLCEKEMIT 325
           +GLKP+ + Y  LI+G C    + KA +L +EM S+ I  PN     +I+  LC++  + 
Sbjct: 466 MGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVV 525

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA   FD +I      DV+ +N +IDGY  +G I +A  +   +I   I P +V++N+LI
Sbjct: 526 EAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLI 585

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G+C+NG++ D   L   +   G++P+ +TY   ++    +G       +  EM      
Sbjct: 586 DGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTT 645

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
               T  +++ GLC+     EA+ + + +  + V  +    NT+I +  K +   +A +L
Sbjct: 646 MDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKEL 705

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
            + +    L P ++TY ++I  L   G ++ AD +   +++   + +      II+    
Sbjct: 706 FDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLE 765

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
           +G++ KA  +  ++   G  IS+   T S    + S
Sbjct: 766 KGEIVKAGNYMFKV--DGKRISLEASTVSLLMALFS 799



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 153/619 (24%), Positives = 285/619 (46%), Gaps = 34/619 (5%)

Query: 38  LYNLRHTDIMWDL--YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           LY+ + +D + +L  +   ++   P  +  N++V   LC+ SR Q A+  L     K  G
Sbjct: 164 LYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVV-KTLCEDSRSQRALDLLHTMVKKSGG 222

Query: 96  --PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
             P+VV+ N ++    + G    A  LF  M++ G+ PD  +Y  +I  LC A +M++A 
Sbjct: 223 CSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAE 282

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK----VIQKLLIKGSDPDIVTYTVL 209
                M  +G +P+ +TY+ +  G+     ISG WK    + +++  +G  P+IVT    
Sbjct: 283 LVLRQMISNGFQPNKVTYNCMIHGY----SISGQWKETAGMFREMTSQGLMPNIVTCNSY 338

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           +   C+ G  +E  +  + M ++G K N++ YSVLL      G   + L L   ME  G+
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGI 398

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
             D   ++I+I    K+  + + + ++ +M  + + P++  +G ++        + +A  
Sbjct: 399 VADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMD 458

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS-PSIVTFNSLIYGF 388
            F+ +I      + ++Y+ +I G+   GN+ +A +L  +++ + I  P+IV FNS+I   
Sbjct: 459 KFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSL 518

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           CK G+V +A  + D +   G  P  +T+ + ++ Y   G I++   +L  M +  I P  
Sbjct: 519 CKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDV 578

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           V+Y  +I G C+  ++ + + L  +M   GV P  ITY  I+           A ++ ++
Sbjct: 579 VSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M         +T  I++ GLC N     A  +   L   N+        T+I A      
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAM----- 693

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
                          +++  R+  K  F  + + G  P+     VM+    + G +    
Sbjct: 694 ---------------YKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEAD 738

Query: 629 ELAAVMIKSGLLPDKFLIN 647
            + ++M KSG  P   L+N
Sbjct: 739 NMFSLMEKSGCAPSSRLLN 757



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 152/584 (26%), Positives = 269/584 (46%), Gaps = 16/584 (2%)

Query: 17  FVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETPRNVYTNSIV 69
            ++ +M EL ++    +YN+++  L       R  D++  +    K      NV T + V
Sbjct: 176 LLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVK--KSGGCSPNVVTYNTV 233

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           I GL ++  +  A     E   +   P VV+  +I+   CK    + A+ +   M+  G 
Sbjct: 234 IHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGF 293

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P+  +YN +IHG  I+G  +E      +M   G+ P+ +T +          +   A +
Sbjct: 294 QPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAE 353

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
               +  KG  P++VTY+VL+ GY   G   + L L   M   G   +   +++++ +  
Sbjct: 354 FFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYG 413

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K G +DE + +  +M+  G+ PD  TY I+I    +  ++  A+  +N+M +  + P   
Sbjct: 414 KRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGI 473

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCI--QDVVLYNIMIDGYVKLGNIGEAVQLYR 367
            + +++ G C    + +A+    S +MS  I   ++V +N +I+   K G + EA  ++ 
Sbjct: 474 VYHSLIQGFCMHGNLVKAKELV-SEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFD 532

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            +I     P ++TFNSLI G+   GK+  A  +LD +   G+EP  V+Y T ++ YC  G
Sbjct: 533 FVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNG 592

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            I   L L  EM +K + PT +TY +++ GL    +   A ++  +M   G T D  T  
Sbjct: 593 RIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCG 652

Query: 488 TIIRSFCK--CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
            I+   C+  C D  +A  +  ++   N++   A  N +ID +      + A  L  S+ 
Sbjct: 653 IILGGLCRNNCDD--EAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSIS 710

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
              +      Y  +IK    EG V +A   F  M + G   S R
Sbjct: 711 ATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSR 754



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 230/495 (46%), Gaps = 19/495 (3%)

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI-CGYCQIGNVEEGLK 224
           P   TY+IL        + +  + +  + L  G   D++  ++L+ C Y    + +    
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM--EAVGLKPDLVTYSILIRG 282
           L   M   G + + I+Y+ ++ ++C+  R   AL LL+ M  ++ G  P++VTY+ +I G
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           L ++ +V KA  L++EM  + + P+   + +I+  LC+   + +A +    +I +    +
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
            V YN MI GY   G   E   ++R++  + + P+IVT NS +   CK+GK  +A    D
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
           ++   G +P+ VTY+  ++ Y  EG    +L L   ME   I      + +VI    K+ 
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            + E + +   M   GV PD  TY  +I +F +   L  A    NQM    L+P    Y+
Sbjct: 417 MMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYH 476

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA-YTTIIKAHCAEGDVHKAMTFFCQMVE 581
            LI G C++G+L  A  L+  +    I    +  + +II + C EG V +A   F  ++ 
Sbjct: 477 SLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIH 536

Query: 582 KG-------FEISIRDY------TKSFFCM--MLSNGFPPDQEICEVMLIAFHQGGDLGS 626
            G       F   I  Y       K+F  +  M+S G  PD      ++  + + G +  
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDD 596

Query: 627 VFELAAVMIKSGLLP 641
              L   M+  G+ P
Sbjct: 597 GLILFGEMLSKGVKP 611



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/472 (23%), Positives = 219/472 (46%), Gaps = 4/472 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDIKVSETPRNVY 64
           + G   +A      M     K ++ TY+ LL+          M +L++ ++ +    +  
Sbjct: 344 KHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQR 403

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             +IVID   ++  + + +L   +   +   P   +   +++ + ++G    A   F  M
Sbjct: 404 VFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQM 463

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV-EPDAITYSILAKGFHLLSQ 183
           +  GL P+   Y+ LI G C+ G++ +A E  ++M   G+  P+ + ++ +        +
Sbjct: 464 IAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGR 523

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A  +   ++  G  PD++T+  LI GY  +G +E+   + + M+S G + +V++Y+ 
Sbjct: 524 VVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNT 583

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+   C++GRID+ L L  EM + G+KP  +TY I++ GL    +   A ++ +EM    
Sbjct: 584 LIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG 643

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            + +    G IL GLC      EA   F  L   N   ++ + N MID   K+    EA 
Sbjct: 644 TTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAK 703

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L+  +    + P+  T+  +I    K G V +A  +   ++  G  PS+      +   
Sbjct: 704 ELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVL 763

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
            E+G I +    + +++ K I     T ++++    ++ K  E V+LL   Y
Sbjct: 764 LEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLLPAKY 815



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 163/331 (49%), Gaps = 6/331 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIM--WDLYDDIKVSETPR 61
            +SR G + DA+    +M  + LK     Y+SL+     H +++   +L  ++     PR
Sbjct: 446 AFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPR 505

Query: 62  N--VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
              V+ NSI I+ LC++ R+ +A             P V++ N+++  Y  +G  E A G
Sbjct: 506 PNIVFFNSI-INSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFG 564

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   M+  G+ PD  SYN LI G C  G +++ L    +M   GV+P  ITY I+  G  
Sbjct: 565 VLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLF 624

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +  GA K+  +++  G+  DI T  +++ G C+    +E + + + + +   K N+ 
Sbjct: 625 NDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIA 684

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
             + ++ +M K  + +EA  L   + A GL P+  TY ++I+ L K+  V +A  +++ M
Sbjct: 685 IINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLM 744

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMY 330
                +P+S     I+  L EK  I +A  Y
Sbjct: 745 EKSGCAPSSRLLNYIIRVLLEKGEIVKAGNY 775



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 3/223 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           Y R G + D + +  +M    +K +  TY  +   L+N   T     +  ++  S T  +
Sbjct: 588 YCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMD 647

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T  I++ GLC+ +   +AI   ++        ++  +N ++    K+   E AK LF 
Sbjct: 648 ISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFD 707

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   GL P+A +Y ++I  L   GS+EEA    + M + G  P +   + + +      
Sbjct: 708 SISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKG 767

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           +I  A   + K+  K    +  T ++L+  + + G   E +KL
Sbjct: 768 EIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKL 810


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 249/485 (51%), Gaps = 6/485 (1%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFG-PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++D   + +   ++ +F   +    +G  + + ++ ++  Y K G  ++A   F     Y
Sbjct: 129 LLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDY 188

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G    A S N ++  L   G +        +M R  +  + +T+ ++  G   + +   A
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             V++ +   G  P ++TY  +I GYC+ G + +   L + M+++    N I +++L+  
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG 308

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            C+   +  A  +  EM+  GL+P++VTY+ LI GLC   K+ +A+ L ++M    + PN
Sbjct: 309 FCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPN 368

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              + A++ G C+K+M+ EAR   D +       +V+ +N +ID Y K G + +A  L  
Sbjct: 369 VVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRS 428

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            +++  + P++ T+N LI GFC+ G V +AR+L   ++ +GL+   VTY   ++A C++G
Sbjct: 429 MMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKG 488

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
             ++ + LL EM    + P+H+TY  +I G  ++     A+ +   M   G   + +TYN
Sbjct: 489 ETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYN 548

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            +I+ FC    L +A +LLN+M    L P   TY+IL D +   G + + D  L     +
Sbjct: 549 VLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHL-----Y 603

Query: 548 NISLT 552
           N+S++
Sbjct: 604 NVSIS 608



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 223/420 (53%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           ++L+      G M+ ALE  +  G +G    A++ + +        +I     V ++++ 
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           +    ++VT+ V+I G C++G  ++   + E M + GF  +VI Y+ ++   CK+G++ +
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A  LL EM A  + P+ +T++ILI G C+ + V  A +++ EM  + + PN   + +++ 
Sbjct: 283 ADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLIN 342

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           GLC    + EA    D +       +VV YN +I+G+ K   + EA ++   + ++ ++P
Sbjct: 343 GLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAP 402

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           +++TFN+LI  + K G++ DA  L   +   G+ P+  TY   +  +C EGN++    L 
Sbjct: 403 NVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLA 462

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           +EME   +    VTY +++  LCK+ + ++AV+LL++M+ +G+ P  +TYN +I  + + 
Sbjct: 463 KEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFRE 522

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
            +   A  +   M          TYN+LI G C  G L+ A+ LL  + E  +   +  Y
Sbjct: 523 GNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 582



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 196/382 (51%), Gaps = 37/382 (9%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           D+ +D+K      +V T + +IDG C+  ++  A   L+E   K   P+ ++ N ++  +
Sbjct: 250 DVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF 309

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           C+      AK +F  M + GL P+  +YN LI+GLC  G ++EAL   + M   G++P+ 
Sbjct: 310 CRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +TY+ L  GF     +  A +++  +  +G  P+++T+  LI  Y + G +++   LR +
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           ML  G   NV  Y+ L+   C+ G + EA  L  EME  GLK DLVTY+IL+  LCK+ +
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
             KA++L +EM    ++P+                                      YN 
Sbjct: 490 TRKAVRLLDEMFEVGLNPSHLT-----------------------------------YNA 514

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKR-ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           +IDGY + GN   A+ + R L+EK+    +IVT+N LI GFC  GK+ +A RLL+ +   
Sbjct: 515 LIDGYFREGNSTAALNV-RTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEK 573

Query: 408 GLEPSAVTYTTFMNAYCEEGNI 429
           GL P+  TY    +   E+G I
Sbjct: 574 GLIPNRTTYDILRDEMMEKGFI 595



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 229/466 (49%), Gaps = 31/466 (6%)

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           FH LS + G+W     +++           +L+  Y + G ++  L+  +     GF+L+
Sbjct: 145 FHSLS-VLGSWGCANSIIVD----------MLVWAYVKNGEMDLALEGFDRAGDYGFRLS 193

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            ++ + +L S+ K GRI     +  EM    +  ++VT+ ++I GLCK  K  KA  +  
Sbjct: 194 ALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVE 253

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M +   SP+   +  I+ G C+   + +A      ++      + + +NI+IDG+ +  
Sbjct: 254 DMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDE 313

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N+  A +++ ++  + + P++VT+NSLI G C NGK+ +A  L D +   GL+P+ VTY 
Sbjct: 314 NVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYN 373

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N +C++  ++    +L ++  + + P  +T+  +I    K  ++ +A  L   M   
Sbjct: 374 ALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDT 433

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           GV P+  TYN +I  FC+  ++++A +L  +M  + L+    TYNIL+D LC  G+ + A
Sbjct: 434 GVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKA 493

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             LL  + E  ++ + + Y  +I  +  EG+   A+     M +KG   +I  Y      
Sbjct: 494 VRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYN----- 548

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                          V++  F   G L     L   M++ GL+P++
Sbjct: 549 ---------------VLIKGFCNKGKLEEANRLLNEMLEKGLIPNR 579



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 171/357 (47%), Gaps = 38/357 (10%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           + G    A  V+  MK      S+ TYN+++        M+    L  ++       N  
Sbjct: 241 KVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEI 300

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I+IDG C+   +  A    +E   +   P+VV+ N++++  C  G  + A GL   M
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM 360

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              GL P+  +YN LI+G C    ++EA E  +D+G+ G+ P+ IT++ L   +    ++
Sbjct: 361 SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRM 420

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A+ +   +L  G  P++ TY  LI G+C+ GNV+E  KL + M   G K +++ Y++L
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNIL 480

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKP--------------------------------- 271
           + ++CK G   +A+ LL EM  VGL P                                 
Sbjct: 481 VDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGR 540

Query: 272 --DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
             ++VTY++LI+G C + K+ +A +L NEM  K + PN   +  +   + EK  I +
Sbjct: 541 RANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 597



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 123/259 (47%), Gaps = 3/259 (1%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYT 65
            G + +A+ +  KM  + LK ++ TYN+L+       ++    ++ DDI       NV T
Sbjct: 347 NGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVIT 406

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + +ID   +  R+ DA L           P+V + N ++  +C+ G  + A+ L   M 
Sbjct: 407 FNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEME 466

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             GL  D  +YNIL+  LC  G   +A+   ++M   G+ P  +TY+ L  G+      +
Sbjct: 467 GNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNST 526

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  V   +  KG   +IVTY VLI G+C  G +EE  +L   ML +G   N   Y +L 
Sbjct: 527 AALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILR 586

Query: 246 SSMCKSGRIDEALGLLYEM 264
             M + G I +  G LY +
Sbjct: 587 DEMMEKGFIPDIDGHLYNV 605


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/550 (26%), Positives = 266/550 (48%), Gaps = 2/550 (0%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL+ ++     P NV T + VI  LC+   +  A   L++  G    P  V+ N ++  Y
Sbjct: 232 DLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGY 291

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
             LG  + A  +F  M   G+ P+  + +  +  LC  G +EEA EF + M   G + + 
Sbjct: 292 STLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNI 351

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           I+YS L  G+     +     +   ++  G  P+   + +L+ GY + G V E + + E 
Sbjct: 352 ISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFED 411

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M  +G   +V+ Y  ++ + C+ G +D+A+     M   G++P+   Y  LI+G C    
Sbjct: 412 MQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGD 471

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + KA +L  E+ +K + P   +  +++  LC++  + EA+  FD +I +    DV ++  
Sbjct: 472 LVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTS 531

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDGY  +G + EA +++  ++   I P IVT+ +L+ G CKNG++ D   L   +   G
Sbjct: 532 LIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKG 591

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           ++P+  TY   ++     G       + QEM    I  T  TY++++ GLC+    +EA+
Sbjct: 592 VKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAI 651

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            + + +  + V  D +  N +I    K +   +A  L   +  + L PT  TY I+++ L
Sbjct: 652 TVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENL 711

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG--FEI 586
              G ++ A+ +   + +  +S T      I++    +G++ KA  + C++  K   FE 
Sbjct: 712 IKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEA 771

Query: 587 SIRDYTKSFF 596
           S      S F
Sbjct: 772 STASMLLSLF 781



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 156/642 (24%), Positives = 294/642 (45%), Gaps = 92/642 (14%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE- 154
           P+V + + ++   C+    ++A   F  +L+ G+  D    + L+ GLC A   +EA++ 
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV-IQKLLIK---GSDPDIVTYTVLI 210
             + M   G  PDAI+YS + K   +       W + I ++ +K   G   ++V Y+ ++
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKS--VCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVV 218

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G  + G V E   L   M  QG   NV+ Y+ ++ ++CK+  +D+A G+L +M   G++
Sbjct: 219 HGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQ 278

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD VTY+ LI G     +  +A++++ EM S+ + PN+      +  LC+   I EAR +
Sbjct: 279 PDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREF 338

Query: 331 FDSLI--------------------------MSNCIQDVV---------LYNIMIDGYVK 355
           FDS++                          MSN    +V         ++NI+++GY K
Sbjct: 339 FDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAK 398

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G + EA+ ++  + ++ ++P ++T+ ++I+ FC+ G + DA    + +   G+EP+   
Sbjct: 399 CGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAV 458

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ-------------- 461
           Y   +  +C  G++ +   L+ E+  K +GP  +++  +I  LCK+              
Sbjct: 459 YQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMII 518

Query: 462 ---------------------WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
                                 K+ EA ++ + M  +G+ PD +TY T++   CK   + 
Sbjct: 519 RTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRID 578

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
               L  ++    ++PT+ TY I++DGL   G    A  +   + E  I++T   Y+ ++
Sbjct: 579 DGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILL 638

Query: 561 KAHCAEGDVHKAMTFFCQ---------------MVEKGFEISIRDYTKSFFCMMLSNGFP 605
              C      +A+T F +               M+ K F+   R+  +  F  +   G  
Sbjct: 639 TGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLV 698

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           P  +   +M+    + G +     + +VM+KSGL P    IN
Sbjct: 699 PTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFIN 740



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/471 (23%), Positives = 220/471 (46%), Gaps = 3/471 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           + G + +A      M     K++I +Y++LL+       + D   L++ +       N +
Sbjct: 328 KHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQH 387

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             +I+++G  +   +++A+   ++   +   P V++  A++  +C++G  + A   F  M
Sbjct: 388 VFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHM 447

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G+ P+   Y  LI G C  G + +A E   ++   G+ P  ++++ L        ++
Sbjct: 448 IDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRV 507

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++   ++  G   D+  +T LI GYC IG + E  ++ + M+S G + +++ Y  L
Sbjct: 508 FEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTL 567

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++  CK+GRID+ L L  E+   G+KP   TY I++ GL    +   A +++ EM    I
Sbjct: 568 VNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGI 627

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +     +  +L GLC      EA   F  L   N   D+V+ NIMI    K     EA  
Sbjct: 628 AVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEG 687

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+  + +  + P++ T+  ++    K G V +A  +   +   GL P++      +    
Sbjct: 688 LFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLL 747

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           E+G I +    +  ++ K+I     T ++++     + K +E + LL   Y
Sbjct: 748 EKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNLLPAKY 798



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 162/363 (44%), Gaps = 38/363 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           Y++ GMV +A+F+   M++  L   + TY ++++    +   D   D ++ +       N
Sbjct: 396 YAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPN 455

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
                 +I G C    L  A   + E   K  GP ++S  ++++  CK G    A+ +F 
Sbjct: 456 FAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFD 515

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           ++++ G   D   +  LI G C+ G M EA    + M   G+EPD +TY  L  G     
Sbjct: 516 MIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNG 575

Query: 183 QISGAWKVIQKLLIKGSDP-----------------------------------DIVTYT 207
           +I     + ++LL KG  P                                    I TY+
Sbjct: 576 RIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYS 635

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +L+ G C+    EE + + + + +   K +++  ++++S M K+ R +EA GL   +   
Sbjct: 636 ILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDY 695

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GL P + TY+I++  L K+  V +A  +++ M    +SP S     I+  L EK  I +A
Sbjct: 696 GLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKA 755

Query: 328 RMY 330
            +Y
Sbjct: 756 GIY 758


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 212/399 (53%), Gaps = 5/399 (1%)

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
           A +YN LI     AG  ++AL     MG+ G+ PD  T+++L   F    ++   WK+ +
Sbjct: 89  ASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFE 148

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           ++  +   P+++TY++LI   C+ G VE+ LK+   M S+G + N+  Y+ ++  + KSG
Sbjct: 149 EMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSG 208

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            +D+A  L  EM + GL    V Y+ LI GL +  +   A +L+ EM SK + P+     
Sbjct: 209 HVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFT 268

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           +++ GL      +EAR  F       C  DV LYN++ID   K   + EA +++ +L E 
Sbjct: 269 SLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEED 328

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            + P + TFN+L+ G CK+G++ DA  LL  +K  G  P    Y T ++   + G ++  
Sbjct: 329 GLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEA 388

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             LL EM++    P  VTY  +I   CK  ++++A++L E++   G   + +TYNTI+  
Sbjct: 389 GQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA-NTVTYNTILNG 447

Query: 493 FCKCKDLRKAFQLLNQMWLHN----LEPTSATYNILIDG 527
            C    + +A++L N M        ++P   TY  L++G
Sbjct: 448 LCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG 486



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 188/378 (49%), Gaps = 1/378 (0%)

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            Y  LI  + + G  ++ L +  VM   G + +   ++VL+++  K+ R+D    L  EM
Sbjct: 91  AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           +     P+++TYSILI  +CK   V KA++++ +M S+   PN F + +++ GL +   +
Sbjct: 151 QNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHV 210

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            +A   F+ +     +   V+YN +I G  + G    A +L+R+++ K + P  VTF SL
Sbjct: 211 DKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSL 270

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           +YG    G+ ++ARR+    +  G       Y   ++  C+   +     +  E+E   +
Sbjct: 271 VYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGL 330

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P   T+  ++ GLCK  ++ +A  LL DM   G TPD   YNT+I    K   + +A Q
Sbjct: 331 VPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQ 390

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           LL +M     EP   TYN LID  C  G +++A  L   +     + T V Y TI+   C
Sbjct: 391 LLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANT-VTYNTILNGLC 449

Query: 565 AEGDVHKAMTFFCQMVEK 582
             G V +A   F  M ++
Sbjct: 450 MAGRVDEAYKLFNGMKQE 467



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 218/472 (46%), Gaps = 44/472 (9%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSE 58
           LA  Y+  G++  +V  + +M+     ++   YNSL+       +T     +Y  +  S 
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              + YT +++++   +  R+       +E   +   P+V++ + ++   CK G  E A 
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M   G  P+ F+Y  +I GL  +G +++A     +M   G+    + Y+ L  G 
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               +   A K+ +++L KG  PD VT+T L+ G    G   E  ++ +     G  L+V
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+VL+ ++CKS R+DEA  +  E+E  GL PD+ T++ L+ GLCK  ++H A  L  +
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD 359

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  KR                                 + C  DV +YN +IDG  K G 
Sbjct: 360 M--KR---------------------------------AGCTPDVTVYNTLIDGLRKSGR 384

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EA QL  ++      P +VT+N+LI   CK G++ DA RL + I   G   + VTY T
Sbjct: 385 VEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNT 443

Query: 419 FMNAYCEEGNIQRLLALL----QEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            +N  C  G +     L     QE     I P  VTYT ++ G  +Q  L E
Sbjct: 444 ILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG-ARQAGLSE 494



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 180/380 (47%)

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           L  GY   G +E+ ++  + M      L   AY+ L+ +  K+G   +AL +   M   G
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           L+PD  T+++L+    K  +V    +L+ EM ++  SPN   +  ++  +C+   + +A 
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             F  +    C  ++  Y  MIDG  K G++ +A  L+ ++  + +  + V +NSLI+G 
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            ++G+   A +L   +   GL+P  VT+T+ +      G       + QE          
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
             Y V+I  LCK  +L EA ++  ++   G+ PD  T+N ++   CK   +  AF LL  
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD 359

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M      P    YN LIDGL  +G ++ A  LL+ +Q        V Y T+I   C  G 
Sbjct: 360 MKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGR 419

Query: 569 VHKAMTFFCQMVEKGFEISI 588
           +  A+  F ++  KGF  ++
Sbjct: 420 IEDALRLFEEISAKGFANTV 439



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 143/339 (42%), Gaps = 25/339 (7%)

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
            A G    GL EK +    RM         C      YN +ID +VK G   +A+ +YR 
Sbjct: 60  LARGYASAGLLEKSVEALKRME-----GHRCALTASAYNSLIDAFVKAGYTQKALAVYRV 114

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + +  + P   TFN L+  F K  +V    +L + ++     P+ +TY+  ++A C+ G 
Sbjct: 115 MGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGG 174

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +++ L +  +M+++   P   TYT +I GL K   + +A  L E+M   G+   ++ YN+
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNS 234

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I    +      A +L  +M    L+P   T+  L+ GL V G    A  +    ++  
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVG 294

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ 608
            +L    Y  +I   C    + +A   F ++ E                    +G  PD 
Sbjct: 295 CALDVNLYNVLIDTLCKSKRLDEAWEIFGELEE--------------------DGLVPDV 334

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                ++    + G +   F L   M ++G  PD  + N
Sbjct: 335 YTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYN 373


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 275/560 (49%), Gaps = 7/560 (1%)

Query: 30  SIQTYNSLLYNLRHT---DIMWDLYDDIKVSET-PRNVYTNSIVIDGLCQQSRLQDAILF 85
           SI+T N+ L  L      D   +++D+++ S     N Y+ + +I  LC+  ++      
Sbjct: 184 SIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEM 243

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
           L E       P+VV+ N +M   CK G  E A  L   M + G+ P   ++ ILI+GL  
Sbjct: 244 LAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLAR 303

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL-SQISGAWKVIQKLLIKGSDPDIV 204
                E      +M + GV P+ + Y+ L  G+H      S A ++  ++++K   P  V
Sbjct: 304 GERFGEVGIVLQEMEQLGVSPNEVIYNELI-GWHCRKGHCSQALRLFDEMVLKKMKPTAV 362

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC-KSGRIDEALGLLYE 263
           TY ++    C+ G +E   ++ E MLS G  ++   ++ +++ +  ++ R++  + +  E
Sbjct: 363 TYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNE 422

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M   G++P+    +  +R LCK  K  +A+ ++ +  +K +  N     A++ GLCE + 
Sbjct: 423 MVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKY 482

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           + EA     +++      D + YNIMI G  K   + EA++L+  +  +   P + TFN+
Sbjct: 483 MKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNT 542

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L++ +C  GK+ +   LLD +K  GL+P  V+Y T ++ +C+  +I++    L E+  + 
Sbjct: 543 LLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRG 602

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           + P    Y  +I G  +   +  A+  +E M   G+ P  +TY +++   C    + +A 
Sbjct: 603 LKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAK 662

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            + +Q   +N++     Y I+I G C  G +  A      ++   IS  K+ YTT++ A+
Sbjct: 663 TIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAY 722

Query: 564 CAEGDVHKAMTFFCQMVEKG 583
              G+  +A   F +MV  G
Sbjct: 723 SKSGNSEEASKLFDEMVGSG 742



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 164/647 (25%), Positives = 303/647 (46%), Gaps = 47/647 (7%)

Query: 28  KVSIQTYNSLLYNLRHT-DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS--RLQDAIL 84
           + +I+T   LL  L H   +          + TP + +     I    Q S  R  DA  
Sbjct: 115 RTAIRTARRLLSRLLHVHPLRTAAEAVADAASTPSSDFLIHTFITSPAQGSLCRAADAFR 174

Query: 85  FLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK-YGLHPDAFSYNILIHGL 143
            L         PS+ + NA +    + G  + A+ +F  M +   +  + +SY  +I  L
Sbjct: 175 VLSSRGAP---PSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKAL 231

Query: 144 CIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
           C AG ++   E   ++ R G++P  +TY++L        ++  A+++  ++   G  P +
Sbjct: 232 CKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSV 291

Query: 204 VTYTVLICGYCQIGNVEE-GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           VT+ +LI G  +     E G+ L+E M   G   N + Y+ L+   C+ G   +AL L  
Sbjct: 292 VTFGILINGLARGERFGEVGIVLQE-MEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFD 350

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK- 321
           EM    +KP  VTY+++ + LCK+ ++ +A ++  +M S  ++ +      ++  L ++ 
Sbjct: 351 EMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRT 410

Query: 322 -----------EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
                      EM+T   M  +  +M+ C++++           K G   EAV ++ + +
Sbjct: 411 RRLESVVSITNEMVTRG-MRPNDPLMTACMRELC----------KGGKHQEAVGIWFKTL 459

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            K +  ++ T N+LI+G C+   + +A +++ T+   G+E  ++TY   +   C++  ++
Sbjct: 460 NKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKME 519

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             + L  +M  +   P   T+  ++   C   K++E   LL+ M   G+ PD ++Y TII
Sbjct: 520 EAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTII 579

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CK KD+RKA + L ++    L+P    YN LI G   NGD+  A   + +++ + I 
Sbjct: 580 DGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQ 639

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK-------GFEISIRDYTK--------SF 595
            T V Y +++   C  G V +A T F Q  E        G+ I I+ Y K        ++
Sbjct: 640 PTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAY 699

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           F  M S G  P++     ++ A+ + G+     +L   M+ SG++PD
Sbjct: 700 FEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPD 746



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 259/565 (45%), Gaps = 49/565 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G V     ++A++    L+ ++ TYN L+  L      +  + L   ++      +V 
Sbjct: 233 KAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVV 292

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T  I+I+GL +  R  +  + LQE       P+ V  N ++  +C+ G    A  LF  M
Sbjct: 293 TFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEM 352

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEA-------------------------------- 152
           +   + P A +YN++   LC  G ME A                                
Sbjct: 353 VLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRR 412

Query: 153 ----LEFTNDMGRHGVEPD-----AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
               +  TN+M   G+ P+     A    +   G H   +  G W    K L KG   ++
Sbjct: 413 LESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKH--QEAVGIW---FKTLNKGLGVNL 467

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
            T   LI G C+   ++E  K+ + ML++G +L+ I Y++++   CK  +++EA+ L  +
Sbjct: 468 ATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGD 527

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M   G KPDL T++ L+   C   K+ +   L ++M ++ + P+  ++G I+ G C+ + 
Sbjct: 528 MTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKD 587

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           I +A+ Y   L+      +V +YN +I GY + G+I  A+     +    I P+ VT+ S
Sbjct: 588 IRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGS 647

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           L+Y  C  G V +A+ +    + + ++   + YT  +  YC+ G +   +A  +EM ++ 
Sbjct: 648 LMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRG 707

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           I P  +TYT ++    K    +EA +L ++M   GV PD ITY T+I    +   L K  
Sbjct: 708 ISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDI 767

Query: 504 QLLNQMWLHNLEPTSATYNILIDGL 528
               ++    L      YNIL +G+
Sbjct: 768 GHTAELSSGALTKDDRMYNILSNGI 792



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 206/407 (50%)

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           N++V   L +  RL+  +    E   +   P+   + A M   CK G  + A G++   L
Sbjct: 400 NTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTL 459

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             GL  +  + N LIHGLC    M+EA +    M   G+E D+ITY+I+ +G    S++ 
Sbjct: 460 NKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKME 519

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A K+   +  +G  PD+ T+  L+  YC +G +EE   L + M ++G + ++++Y  ++
Sbjct: 520 EAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTII 579

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              CK+  I +A   L E+   GLKP++  Y+ LI G  +   +  AI     M S  I 
Sbjct: 580 DGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQ 639

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P +  +G+++  +C   ++ EA+  F     +N    V+ Y IMI GY KLG + EAV  
Sbjct: 640 PTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAY 699

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           + ++  + ISP+ +T+ +L+Y + K+G   +A +L D +   G+ P  +TY T +    E
Sbjct: 700 FEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSE 759

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             ++ + +    E+ + A+      Y ++  G+   W  +EA   +E
Sbjct: 760 VNSLDKDIGHTAELSSGALTKDDRMYNILSNGINAPWCQKEAASSVE 806


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/505 (28%), Positives = 249/505 (49%), Gaps = 18/505 (3%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
           VY + G+   AV +  ++KE     S++ YN +L  L       +++ +Y D+K      
Sbjct: 119 VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEP 178

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV+T ++++  LC+ +++  A   L E + K   P+ VS   ++S  C++G  +  +   
Sbjct: 179 NVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGR--- 235

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              L     P    YN LI+GLC     +  +E  ++M   G+ P+ I+YS L       
Sbjct: 236 --QLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNS 293

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--NVI 239
            QI  A+ ++ ++L +G  P+I T + L+ G    G   + L +   M+ +GF L  NV+
Sbjct: 294 GQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMI-RGFGLQPNVV 352

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           AY+ L+   C  G ID+A+ +   ME +G  P++ TY  LI G  K+  +  A+ ++N+M
Sbjct: 353 AYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKM 412

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            +    PN   + +++  LC      EA    + +   NC   V  +N  I G    G +
Sbjct: 413 LTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 472

Query: 360 GEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             A +++RQ+ ++ R  P+IVT+N L+ G  K  ++ +A  L   I + G+E S  TY T
Sbjct: 473 DWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNT 532

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++  C  G     L L+ +M      P  +T  ++I   CKQ K + AVQ+L D+   G
Sbjct: 533 LLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQML-DLVSCG 591

Query: 479 ---VTPDQITYNTIIRSFCK--CKD 498
                PD I+Y  +I   C+  C++
Sbjct: 592 RRKWRPDVISYTNVIWGLCRSNCRE 616



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 250/511 (48%), Gaps = 7/511 (1%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T  ++I  L    ++      LQ+   + F  S     +++S Y ++G AE A  +F  +
Sbjct: 77  TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 136

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            ++G  P    YN ++  L     ++       DM R G EP+  TY++L K     +++
Sbjct: 137 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 196

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
            GA K++ ++  KG  P+ V+YT +I   C++G V+EG +L E      F+  V  Y+ L
Sbjct: 197 DGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAE-----RFEPVVSVYNAL 251

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++ +CK       + L+ EM   G+ P++++YS LI  L    ++  A  L  +M  +  
Sbjct: 252 INGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGC 311

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAV 363
            PN     +++ G   +    +A   ++ +I    +Q +VV YN ++ G+   GNI +AV
Sbjct: 312 HPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAV 371

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            ++  + E   SP+I T+ SLI GF K G +  A  + + +   G  P+ V YT+ + A 
Sbjct: 372 SVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEAL 431

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM-YVIGVTPD 482
           C     +   +L++ M  +   P+  T+   IKGLC   +L  A ++   M       P+
Sbjct: 432 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPN 491

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TYN ++    K   + +A+ L  ++++  +E +++TYN L+ G C  G    A  L+ 
Sbjct: 492 IVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVG 551

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
            +  +  S  ++    II A+C +G   +A+
Sbjct: 552 KMMVNGKSPDEITMNMIILAYCKQGKAERAV 582



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/508 (22%), Positives = 224/508 (44%), Gaps = 59/508 (11%)

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            +T+ ++ +   +  Q+     ++Q++ ++G       +  +I  Y Q+G  E  +++  
Sbjct: 75  PLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFY 134

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            +   G   +V  Y+ +L ++    RI     +  +M+  G +P++ TY++L++ LCK +
Sbjct: 135 RIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN 194

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV-LY 346
           KV  A +L  EM +K   PN+ ++  ++  +CE  M+ E R   +        + VV +Y
Sbjct: 195 KVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERF------EPVVSVY 248

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL----- 401
           N +I+G  K  +    V+L  +++EK ISP+++++++LI     +G++  A  LL     
Sbjct: 249 NALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLK 308

Query: 402 -------------------------------DTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
                                            I+  GL+P+ V Y T +  +C  GNI 
Sbjct: 309 RGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNID 368

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           + +++   ME     P   TY  +I G  K+  L+ AV +   M   G  P+ + Y +++
Sbjct: 369 KAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMV 428

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL-QEHNI 549
            + C+    ++A  L+  M   N  P+  T+N  I GLC  G L  A+ +   + Q++  
Sbjct: 429 EALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRC 488

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------S 594
               V Y  ++        + +A     ++  +G E S   Y                  
Sbjct: 489 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQ 548

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGG 622
               M+ NG  PD+    ++++A+ + G
Sbjct: 549 LVGKMMVNGKSPDEITMNMIILAYCKQG 576



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 151/306 (49%), Gaps = 11/306 (3%)

Query: 10  GMVHDAVFVIAKM-KELDLKVSIQTYNSLLYNL-RHTDIMWDLYDDIKVSE---TPRNVY 64
           G   DA+ +  +M +   L+ ++  YN+L+     H +I   +   + + E   +P N+ 
Sbjct: 329 GTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSP-NIR 387

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T   +I+G  ++  L+ A+    +       P+VV   +++   C+    + A+ L  +M
Sbjct: 388 TYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIM 447

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLLSQ 183
            K    P   ++N  I GLC AG ++ A +    M  ++   P+ +TY+ L  G    ++
Sbjct: 448 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANR 507

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I  A+ + +++ ++G +    TY  L+ G C  G     L+L   M+  G   + I  ++
Sbjct: 508 IEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNM 567

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVG---LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++ + CK G+ + A+ +L ++ + G    +PD+++Y+ +I GLC+ +     + L+  M 
Sbjct: 568 IILAYCKQGKAERAVQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMI 626

Query: 301 SKRISP 306
           S+RI P
Sbjct: 627 SERIIP 632


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 272/550 (49%), Gaps = 19/550 (3%)

Query: 110 KLGFAEVAKGLFCLMLKYGLH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           K    + ++ +  LM + G++  P+AFS  ++ +    AG + +AL+    M R GVEP+
Sbjct: 219 KTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSR--AGQLRDALKVLTLMQRAGVEPN 276

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            +  +     F   +++  A + ++++ + G  P++VTY  +I GYC +  VEE ++L E
Sbjct: 277 LLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLE 336

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQ 286
            M S+G   + ++Y  ++  +CK  RI E   L+ +M +  GL PD VTY+ LI  L K 
Sbjct: 337 DMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKH 396

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQDVVL 345
           D   +A+    +   K    +   + AI+  LC++  ++EA+   + ++   +C  DVV 
Sbjct: 397 DHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVT 456

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y  +++G+ +LG + +A +L + +      P+ V++ +L+ G C+ GK  +AR +++  +
Sbjct: 457 YTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSE 516

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
            H   P+++TY+  M+    EG +     +++EM  K   P  V   ++++ LC+  +  
Sbjct: 517 EHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTH 576

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA + +E+    G   + + + T+I  FC+  +L  A  +L+ M+L N      TY  L+
Sbjct: 577 EARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLV 636

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV-------------HKA 572
           D L   G +  A  L+  +    I  T V Y T+I  +C  G V              K 
Sbjct: 637 DTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC 696

Query: 573 MTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
            T + Q++EK   +   +   +    +L      D + C  ++  + + G   S +++A 
Sbjct: 697 RTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVAC 756

Query: 633 VMIKSGLLPD 642
            M    L+PD
Sbjct: 757 RMFNRNLIPD 766



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 154/547 (28%), Positives = 265/547 (48%), Gaps = 7/547 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNS---LLYNLRHTDIMWDLYDDIKVSETPRN 62
           YSR G + DA+ V+  M+   ++ ++   N+   +       +      + ++V     N
Sbjct: 252 YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPN 311

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +I G C   R+++AI  L++   K   P  VS   IM   CK       + L  
Sbjct: 312 VVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 371

Query: 123 LMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            M K +GL PD  +YN LIH L      +EAL F  D    G   D + YS +       
Sbjct: 372 KMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKE 431

Query: 182 SQISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
            ++S A  +I ++L KG   PD+VTYT ++ G+C++G V++  KL +VM + G K N ++
Sbjct: 432 GRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVS 491

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ LL+ MC++G+  EA  ++   E     P+ +TYS+++ GL ++ K+ +A  +  EM 
Sbjct: 492 YTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV 551

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K   P       +L  LC      EAR + +  +   C  +VV +  +I G+ +   + 
Sbjct: 552 LKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELD 611

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A+ +   +        + T+ +L+    K G++A+A  L+  +   G++P+ VTY T +
Sbjct: 612 AALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 671

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + YC+ G +  L+A+L++M ++    T   Y  VI+ LC   KL+EA  LL  +      
Sbjct: 672 HRYCQMGKVDDLVAILEKMISRQKCRT--IYNQVIEKLCVLGKLEEADTLLGKVLRTASR 729

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            D  T   ++  + K      A+++  +M+  NL P       L   L + G +  AD L
Sbjct: 730 SDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKL 789

Query: 541 LVSLQEH 547
           ++ L E 
Sbjct: 790 MLRLVER 796



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 145/550 (26%), Positives = 260/550 (47%), Gaps = 28/550 (5%)

Query: 67  SIVIDGLCQQSRLQDA--ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           S V+    +  +L+DA  +L L + AG E  P+++  N  +  + +    E A      M
Sbjct: 246 SRVMVSYSRAGQLRDALKVLTLMQRAGVE--PNLLICNTTIDVFVRANRLEKALRFLERM 303

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G+ P+  +YN +I G C    +EEA+E   DM   G  PD ++Y  +        +I
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363

Query: 185 SGAWKVIQKLLIK-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
                +++K+  + G  PD VTY  LI    +  + +E L   +    +GF+++ + YS 
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVG-LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           ++ ++CK GR+ EA  L+ EM + G   PD+VTY+ ++ G C+  +V KA +L   M + 
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              PN+ ++ A+L G+C      EAR   +         + + Y++++ G  + G + EA
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEA 543

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             + R+++ K   P  V  N L+   C++G+  +AR+ ++     G   + V +TT ++ 
Sbjct: 544 CDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHG 603

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +C+   +   L++L +M          TYT ++  L K+ ++ EA +L++ M   G+ P 
Sbjct: 604 FCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPT 663

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TY T+I  +C+   +     +L +M   + +     YN +I+ LCV G L+ AD L  
Sbjct: 664 PVTYRTVIHRYCQMGKVDDLVAILEKMI--SRQKCRTIYNQVIEKLCVLGKLEEADTL-- 719

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
                   L KV  T       +  D           ++KG  +S         C M + 
Sbjct: 720 --------LGKVLRTA------SRSDAKTCYALMEGYLKKGVPLS----AYKVACRMFNR 761

Query: 603 GFPPDQEICE 612
              PD ++CE
Sbjct: 762 NLIPDVKMCE 771


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 246/503 (48%), Gaps = 35/503 (6%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTN----DMGRHGVEPDAITYSILAKGFHLLSQISG 186
           P  + YN+L+   CI    E  +EF +    DM   G+ P+  T+++L +     S +  
Sbjct: 110 PGIYLYNVLLES-CIR---ERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDA 165

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A ++  ++  KG  P+  T+ +L+ GYC+ G  ++GL+L   M S G   N + Y+ ++S
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVS 225

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI-- 304
           S C+ GR D++  L+ +M   GL PD+VT++  I  LCK+ KV  A +++++M       
Sbjct: 226 SFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285

Query: 305 --SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              PNS  +  +L G C+  ++ +A+  F+S+  ++ +  +  YNI + G V+ G   EA
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEA 345

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             + +Q+I+K I PSI ++N L+ G CK G ++DA+ ++  +K +G+ P AVTY   ++ 
Sbjct: 346 ETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHG 405

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC  G +    +LLQEM      P   T  +++  L    ++ EA +LL  M   G   D
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLD 465

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLH-----------------------NLEPTSA 519
            +T N I+   C   +L KA +++  M +H                       N  P   
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TY+ L++GLC  G    A  L   +    +    +AY   I   C +G +  A      M
Sbjct: 526 TYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDM 585

Query: 580 VEKGFEISIRDYTKSFFCMMLSN 602
            +KG   S+  Y      + + N
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKN 608



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 154/586 (26%), Positives = 276/586 (47%), Gaps = 20/586 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G+    + ++  M+   +  +   YN+++ +       D    L + ++      +
Sbjct: 192 YCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPD 251

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEF----GPSVVSLNAIMSRYCKLGFAEVAK 118
           + T +  I  LC++ ++ DA     +    E+     P+ ++ N ++  +CK+G  E AK
Sbjct: 252 IVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAK 311

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            LF  + +        SYNI + GL   G   EA      M   G+ P   +Y+IL  G 
Sbjct: 312 TLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGL 371

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             L  +S A  ++  +   G  PD VTY  L+ GYC +G V+    L + M+      N 
Sbjct: 372 CKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNA 431

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
              ++LL S+   GRI EA  LL +M   G   D VT +I++ GLC   ++ KAI++   
Sbjct: 432 YTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKG 491

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M   R+      HG+  LG      I    +  DSLI +NC+ D++ Y+ +++G  K G 
Sbjct: 492 M---RV------HGSAALGNLGNSYIG---LVDDSLIENNCLPDLITYSTLLNGLCKAGR 539

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             EA  L+ +++ +++ P  + +N  I+ FCK GK++ A R+L  ++  G   S  TY +
Sbjct: 540 FAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +     +  I  +  L+ EM  K I P   TY   I+ LC+  K+++A  LL++M    
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKN 659

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           + P+  ++  +I +FCK  D   A ++  +  +         Y+++ + L   G L  A 
Sbjct: 660 IAPNVFSFKYLIGAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKAT 718

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            LL ++ +    L    Y  ++ + C + ++  A     +M++KG+
Sbjct: 719 ELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGY 764



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/584 (23%), Positives = 256/584 (43%), Gaps = 62/584 (10%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           +  E    +Y  +++++   ++ R++      ++       P   + N ++   C     
Sbjct: 104 RFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCV 163

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           + A+ LF  M + G  P+ F++ IL+ G C AG  ++ LE  N M   GV P+ + Y+ +
Sbjct: 164 DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTI 223

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIV------------------------------ 204
              F    +   + K+++K+  +G  PDIV                              
Sbjct: 224 VSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283

Query: 205 ---------TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
                    TY +++ G+C++G +E+   L E +      +++ +Y++ L  + + G+  
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFI 343

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           EA  +L +M   G+ P + +Y+IL+ GLCK   +  A  +   M    +SP++  +G +L
Sbjct: 344 EAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLL 403

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            G C    +  A+     ++ +NC+ +    NI++     +G I EA +L R++ EK   
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYG 463

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE-----------------------PS 412
              VT N ++ G C +G++  A  ++  +++HG                         P 
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            +TY+T +N  C+ G       L  EM  + + P  + Y + I   CKQ K+  A ++L+
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLK 583

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           DM   G      TYN++I        + +   L+++M    + P   TYN  I  LC  G
Sbjct: 584 DMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGG 643

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            +++A  LL  + + NI+    ++  +I A C   D   A   F
Sbjct: 644 KVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVF 687



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 140/549 (25%), Positives = 242/549 (44%), Gaps = 69/549 (12%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR-----HTDIMWD---LYDDIKVSET 59
           + G V DA  + + M ELD  + +   NS+ YNL         ++ D   L++ I+ ++ 
Sbjct: 264 KEGKVLDASRIFSDM-ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             ++ + +I + GL +  +  +A   L++   K  GPS+ S N +M   CKLG    AK 
Sbjct: 323 LVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +  LM + G+ PDA +Y  L+HG C  G ++ A     +M R+   P+A T +IL     
Sbjct: 383 IVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--- 236
            + +IS A ++++K+  KG   D VT  +++ G C  G +++ +++ + M   G      
Sbjct: 443 NMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502

Query: 237 --------------------NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
                               ++I YS LL+ +CK+GR  EA  L  EM    L+PD + Y
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAY 562

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +I I   CKQ K+  A ++  +M  K    +   + +++LGL  K  I E     D +  
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMRE 622

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK------ 390
                ++  YN  I    + G + +A  L  ++++K I+P++ +F  LI  FCK      
Sbjct: 623 KGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDM 682

Query: 391 ----------------------------NGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
                                        G++  A  LL+ +   G E     Y   + +
Sbjct: 683 AQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVS 742

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE---DMYVIGV 479
            C++  ++    +L +M  K  G        VI GL K    +EA    E   +M  +G 
Sbjct: 743 LCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASVGE 802

Query: 480 TPDQITYNT 488
             +++  N 
Sbjct: 803 VANKVDPNA 811



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 203/481 (42%), Gaps = 77/481 (16%)

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           K  +  Y+VLL S  +  R++    L  +M   G+ P+  T+++LIR LC    V  A +
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L++EM  K   PN F  G ++ G C+  +  +     +S+     + + V+YN ++  + 
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH---GL-E 410
           + G   ++ +L  ++ E+ + P IVTFNS I   CK GKV DA R+   ++L    GL  
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLAL----------------------------------- 435
           P+++TY   +  +C+ G ++    L                                   
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           L++M  K IGP+  +Y +++ GLCK   L +A  ++  M   GV+PD +TY  ++  +C 
Sbjct: 349 LKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCS 408

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              +  A  LL +M  +N  P + T NIL+  L   G +  A+ LL  + E    L  V 
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVT 468

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFE---------ISIRDYT-------------- 592
              I+   C  G++ KA+     M   G           I + D +              
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528

Query: 593 ---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
                          K+ F  M+     PD     + +  F + G + S F +   M K 
Sbjct: 529 TLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKK 588

Query: 638 G 638
           G
Sbjct: 589 G 589



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 152/324 (46%), Gaps = 19/324 (5%)

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           + LYN++++  ++   +     LY+ ++   ISP   TFN LI   C +  V  AR L D
Sbjct: 112 IYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFD 171

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G +P+  T+   +  YC+ G   + L LL  ME+  + P  V Y  ++   C++ 
Sbjct: 172 EMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREG 231

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL----EPTS 518
           +  ++ +L+E M   G+ PD +T+N+ I + CK   +  A ++ + M L        P S
Sbjct: 232 RNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNS 291

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TYN+++ G C  G L++A  L  S++E++  ++  +Y   ++     G   +A T   Q
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQ 351

Query: 579 MVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           M++KG   SI  Y                K+   +M  NG  PD      +L  +   G 
Sbjct: 352 MIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGK 411

Query: 624 LGSVFELAAVMIKSGLLPDKFLIN 647
           + +   L   M+++  LP+ +  N
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCN 435


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 225/460 (48%), Gaps = 3/460 (0%)

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL-MLKYGLHPD 132
           C+  +  +++ FL+    K + P V+    ++  +    F  + K    + +L+    PD
Sbjct: 79  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGF--FNFKNIEKASRVMEILESHTEPD 136

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
            F+YN +I G C    +E A +  N M   G  PD +TY+I+        ++  A KV+ 
Sbjct: 137 VFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLD 196

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           +LL+    P ++TYT+LI      G + E +KL E ML++G   ++  Y+ ++  MCK G
Sbjct: 197 QLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEG 256

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            ++ A  L+  + + G KPD+++Y+IL+R    Q K  +  +L  EM S+   PN   + 
Sbjct: 257 MVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYS 316

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC    I EA      +I      D   Y+ +I    K G +  A+ +   +I  
Sbjct: 317 ILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN 376

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P IV +N+++   CKNG    A  + + ++  G  P+  +Y T ++A    G+  R 
Sbjct: 377 GCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRA 436

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L ++  M +K + P  +TY  +I  LC+   ++EA+ LL+DM   G  P  I+YN ++  
Sbjct: 437 LGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLG 496

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            CK + +  A  +  +M      P   TY +LI+G+   G
Sbjct: 497 LCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG 536



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 228/419 (54%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V + NA++S +CK+   E A  +   M   G  PD  +YNI+I  LC    +  AL+ 
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + +      P  ITY+IL +   +   I+ A K+++++L +G  PD+ TY  +I G C+
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G VE   +L   + S+G K +VI+Y++LL +    G+ DE   L+ EM + G +P+ VT
Sbjct: 255 EGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 314

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           YSILI  LC+  ++ +AI +   M  K ++P+++++  ++  LC++  +  A    D +I
Sbjct: 315 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 374

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            + C+ D+V YN ++    K GN  +A++++ +L      P++ ++N++I      G  +
Sbjct: 375 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 434

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  ++  +   G++P  +TY + ++  C +G ++  + LL +ME     PT ++Y +V+
Sbjct: 435 RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 494

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
            GLCK  ++ +A+ +  +M   G  P++ TY  +I          +A +L N ++  ++
Sbjct: 495 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDV 553



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 230/445 (51%), Gaps = 1/445 (0%)

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           L++  C AG   E+L F   +   G  PD I  + L KGF     I  A +V++ +L   
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVME-ILESH 132

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
           ++PD+  Y  +I G+C++  +E   ++   M ++GF  +++ Y++++ S+C   ++  AL
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +L ++      P ++TY+ILI     +  +++A++L  EM ++ + P+ + + AI+ G+
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++ M+  A     SL    C  DV+ YNI++  ++  G   E  +L  ++  +   P+ 
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VT++ LI   C+ G++ +A  +L  +    L P   +Y   ++A C+EG +   + ++  
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M +    P  V Y  ++  LCK     +A+++   +  +G  P+  +YNT+I +   C D
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 432

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
             +A  ++  M    ++P   TYN LI  LC +G ++ A  LL  +++     T ++Y  
Sbjct: 433 RSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 492

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKG 583
           ++   C    +  A+  F +M+EKG
Sbjct: 493 VLLGLCKVRRIDDAIGMFAEMIEKG 517



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 230/474 (48%), Gaps = 3/474 (0%)

Query: 101 LNAIMSRYCKLG-FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           L  +++R CK G F E    L CL+ K G  PD      LI G     ++E+A      +
Sbjct: 71  LMKLLNRSCKAGKFNESLYFLECLVNK-GYTPDVILCTKLIKGFFNFKNIEKASRVMEIL 129

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
             H  EPD   Y+ +  GF  +++I  A +V+ ++  +G  PDIVTY ++I   C    +
Sbjct: 130 ESH-TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKL 188

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
              LK+ + +L       VI Y++L+ +    G I+EA+ LL EM A GL PD+ TY+ +
Sbjct: 189 GLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAI 248

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           IRG+CK+  V +A +L   + SK   P+  ++  +L     +    E       +    C
Sbjct: 249 IRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGC 308

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             + V Y+I+I    + G I EA+ + + +IEK ++P   +++ LI   CK G++  A  
Sbjct: 309 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 368

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           ++D +  +G  P  V Y T + A C+ GN  + L +  ++      P   +Y  +I  L 
Sbjct: 369 IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALW 428

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
                  A+ ++  M   GV PD+ITYN++I   C+   + +A  LL+ M      PT  
Sbjct: 429 SCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVI 488

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           +YNI++ GLC    + +A  +   + E      +  Y  +I+     G   +AM
Sbjct: 489 SYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM 542



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 213/445 (47%), Gaps = 16/445 (3%)

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+ G   E L   E ++++G+  +VI  + L+        I++A  ++  +E+   +PD+
Sbjct: 79  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES-HTEPDV 137

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
             Y+ +I G CK +++  A Q+ N M ++   P+   +  ++  LC +  +  A    D 
Sbjct: 138 FAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQ 197

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L++ NC+  V+ Y I+I+  +  G I EA++L  +++ + + P + T+N++I G CK G 
Sbjct: 198 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 257

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V  A  L+ ++   G +P  ++Y   + A+  +G       L+ EM ++   P  VTY++
Sbjct: 258 VERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSI 317

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I  LC+  ++ EA+ +L+ M    +TPD  +Y+ +I + CK   L  A  +++ M  + 
Sbjct: 318 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 377

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
             P    YN ++  LC NG+   A  +   L+         +Y T+I A  + GD  +A+
Sbjct: 378 CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL 437

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAF 618
                M+ KG +     Y     C+               M  +GF P      ++L+  
Sbjct: 438 GMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 497

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDK 643
            +   +     + A MI+ G  P++
Sbjct: 498 CKVRRIDDAIGMFAEMIEKGCRPNE 522



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 188/404 (46%), Gaps = 21/404 (5%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           LL+  CK+G+ +E+L  L  +   G  PD++  + LI+G      + KA ++  E+    
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+ FA+ A++ G C+   I  A    + +     + D+V YNIMI        +G A+
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           ++  QL+     P+++T+  LI      G + +A +LL+ +   GL P   TY   +   
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+EG ++R   L+  + +K   P  ++Y ++++    Q K  E  +L+ +M+  G  P++
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TY+ +I S C+   + +A  +L  M    L P + +Y+ LI  LC  G L  A  ++  
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           +  +      V Y TI+ A C  G+ ++A+  F ++  +G                   G
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL--RGM------------------G 412

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            PP+      M+ A    GD      +   MI  G+ PD+   N
Sbjct: 413 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYN 456



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 194/402 (48%), Gaps = 3/402 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           + +   +  A  V+ +MK       I TYN +   L N R   +   + D + +      
Sbjct: 147 FCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPT 206

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T +I+I+    +  + +A+  L+E   +   P + + NAI+   CK G  E A  L  
Sbjct: 207 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELIT 266

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   G  PD  SYNIL+      G  +E  +   +M   G EP+ +TYSIL        
Sbjct: 267 SLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFG 326

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +I  A  V++ ++ K   PD  +Y  LI   C+ G ++  + + + M+S G   +++ Y+
Sbjct: 327 RIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYN 386

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +L+++CK+G  ++AL +  ++  +G  P++ +Y+ +I  L       +A+ +   M SK
Sbjct: 387 TILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISK 446

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   + +++  LC   ++ EA    D +  S     V+ YNI++ G  K+  I +A
Sbjct: 447 GVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDA 506

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           + ++ ++IEK   P+  T+  LI G    G   +A  L +++
Sbjct: 507 IGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 548


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/575 (25%), Positives = 272/575 (47%), Gaps = 6/575 (1%)

Query: 14  DAVFVIAKMKELDLKVS---IQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTN-SIV 69
           +A+ ++ +M+E+ L+ S   I     LL  +     +W L   + + + PR    N + V
Sbjct: 97  EALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGM-IHQGPRPCNRNFNAV 155

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           I G C++  ++     L      +  P V + N +++ YC  G    A G    M+  G 
Sbjct: 156 ILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGC 215

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P   ++  +I+  C  G+M EA    + M   G  P+ + Y+ L  G+     I  A  
Sbjct: 216 TPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANM 275

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           + +++  K   PD  T+ +L+ G+ + G  E+  +L   +   G       Y++ +S +C
Sbjct: 276 LYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLC 335

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
            +G +DEA+  L +M   G+ P +V ++ +I    +     KA + Y  M    + P+S 
Sbjct: 336 WAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSL 395

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
              ++++GL +   + EAR     +I+     +   + +++DGY ++G++  A  L+ ++
Sbjct: 396 TCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEM 455

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
             + I P  V F++ I G    G V +A  +   +   G  P+   Y + +  +C  G +
Sbjct: 456 EGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRL 515

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           Q  L L +EM  K + P   T  ++I GLCK+ +++ A  +  +M+  G+ PD +TYNT+
Sbjct: 516 QEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTL 575

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I  +CK  D     +++N+M+    +P   TYNI + GLC    +  A  +L  L    +
Sbjct: 576 IDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGV 635

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
               V Y T++   C +  + +AM    ++++  F
Sbjct: 636 VPDTVTYNTVMNGVCTD-VLERAMIVTAKLLKMAF 669



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/552 (24%), Positives = 241/552 (43%), Gaps = 20/552 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS  ++  +     ++G       L   M+  G  P   ++N +I G C  G ++     
Sbjct: 112 PSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESL 171

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M +   +PD   Y+IL   +    Q   A   ++ ++  G  P +VT+  +I  +C 
Sbjct: 172 LCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCN 231

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            GN+ E   L + M   G   NV+ Y+ L++   K+  I +A  L  EM++  + PD  T
Sbjct: 232 QGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTT 291

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++IL+ G  +  +     +L  ++        S  +   + GLC    + EA  + + ++
Sbjct: 292 FNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDML 351

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                  VV +N +I  Y + G   +A + YR +++  + PS +T +SLI G  K  ++ 
Sbjct: 352 EKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQ 411

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +AR LL  + + GL  +   +T  ++ Y   G++    +L  EME + I P  V ++  I
Sbjct: 412 EARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFI 471

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GL     + EA  +   M   G  P+   YN++IR FC    L++A  L  +M    L 
Sbjct: 472 NGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLL 531

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   T NI+I+GLC  G +K+A  +  ++    +    V Y T+I  +C           
Sbjct: 532 PDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYC----------- 580

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
                 K F+    D   +    M + G+ PD     + L     G  +     +   +I
Sbjct: 581 ------KAFDTVSTDEVVN---KMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELI 631

Query: 636 KSGLLPDKFLIN 647
            +G++PD    N
Sbjct: 632 SAGVVPDTVTYN 643



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/497 (24%), Positives = 236/497 (47%), Gaps = 4/497 (0%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN-LRHTDIMWD--LYDDIKVSETPR 61
            +   G + +A  +   MKE     ++  YN+L+   ++  DI     LY+++K      
Sbjct: 228 AFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAP 287

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +  T +I++ G  +  R +D    L++ +           N  +S  C  G+ + A    
Sbjct: 288 DCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFL 347

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML+ G+ P   ++N +I     AG  E+A +    M + G+ P ++T S L  G   L
Sbjct: 348 EDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKL 407

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  ++ +++++G   +   +T+L+ GY ++G+V     L   M  +G   + +A+
Sbjct: 408 WRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAF 467

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S  ++ +   G +DEA  +  +M   G  P+   Y+ LIRG C   ++ +A+ L  EM  
Sbjct: 468 SAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMAR 527

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K + P+ F    I+ GLC++  +  A   F ++  +  I D+V YN +IDGY K  +   
Sbjct: 528 KGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVS 587

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
             ++  ++      P I T+N  ++G C   K++ A  +L+ +   G+ P  VTY T MN
Sbjct: 588 TDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMN 647

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C +  ++R + +  ++   A  P  VT  +++   CKQ   ++ +   + +  I    
Sbjct: 648 GVCTD-VLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKTIMWGQKLNEISFGF 706

Query: 482 DQITYNTIIRSFCKCKD 498
           D+I+   + R++   +D
Sbjct: 707 DEISIKLMDRAYRNIQD 723



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 214/499 (42%), Gaps = 23/499 (4%)

Query: 150 EEALEFTNDMGRHG-VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
            E +EF     RH   E D      L +GF  +     A +++ ++   G  P     T+
Sbjct: 62  REVVEFM--WKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITI 119

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           L     +IG+     KL   M+ QG +     ++ ++   C+ G +     LL  M+   
Sbjct: 120 LFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFK 179

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
            +PD+  Y+ILI   C + +   A+     M     +P+    G ++   C +  + EAR
Sbjct: 180 CQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEAR 239

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             FD +  +  I +VV YN +++GYVK  +IG+A  LY ++  K ++P   TFN L+ G 
Sbjct: 240 NLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGH 299

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            + G+  D  RLL  +   G    +  Y   ++  C  G +   +  L++M  K I PT 
Sbjct: 300 YRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTV 359

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           V +  +I    +    ++A +    M   G+ P  +T +++I    K   L++A  LL +
Sbjct: 360 VAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYE 419

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M +  L    A + +L+DG    GD+  A  L   ++   I    VA++  I      G 
Sbjct: 420 MIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGL 479

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
           V +A   F QM +KGF                     P+  +   ++  F   G L    
Sbjct: 480 VDEAYDVFLQMSKKGFM--------------------PNNFVYNSLIRGFCNSGRLQEAL 519

Query: 629 ELAAVMIKSGLLPDKFLIN 647
            L   M + GLLPD F  N
Sbjct: 520 MLEREMARKGLLPDIFTTN 538


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 279/544 (51%), Gaps = 5/544 (0%)

Query: 23  KELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRL 79
           + +D+  ++QTYN L+      +  +    L D +       +V++   +I+G+ +   L
Sbjct: 143 ESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDL 202

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK-YGLHPDAFSYNI 138
             A+    E + +     V   N ++  + K G  +  K ++  ++K   ++P+  +YNI
Sbjct: 203 LGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNI 262

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           +I+GLC  G  +E+LE    M ++  E D  TYS L  G      I GA +V ++++   
Sbjct: 263 MINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESS 322

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
              D VT+  ++ G+C+ G ++E  +L  VM  +  +  V++Y++L+  + ++G+++EA+
Sbjct: 323 LVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAI 381

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +   +   G +P+  TY +LI GLCK  +++KA++++ E        +++A+ +++ GL
Sbjct: 382 SIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGL 441

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++  + EA    + +       D  + N +I+G+V+   + +A+  +R++  K  SP+I
Sbjct: 442 CKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTI 501

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           V++N+LI G CK  + ++A   +  +     +P  +T +  M+  C+E  I+  L L Q+
Sbjct: 502 VSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQ 561

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
              K   P    Y +++ GLC   KL++A+QL   M      P+ +T NT++    K +D
Sbjct: 562 ALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRD 621

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
             KA ++ + +    L P   +YNI I GLC    + +A   L       I  T V +  
Sbjct: 622 YEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNI 681

Query: 559 IIKA 562
           +++A
Sbjct: 682 LVRA 685



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 249/537 (46%), Gaps = 39/537 (7%)

Query: 94  FG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           FG  P V S N +++ + +L   + A+          + P+  +YNILI   C    +E+
Sbjct: 110 FGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEK 169

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A+   + M    ++PD  +Y  L  G   +  + GA KV  ++ ++G   D+  Y +LI 
Sbjct: 170 AISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLID 229

Query: 212 GYCQIGNVEEGLKLREVMLSQ-GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
           G+ + G+ ++G ++ E ++       NV+ Y+++++ +CK GR DE+L +   M     +
Sbjct: 230 GFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNERE 289

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
            D+ TYS LI GLC+   +  A+++Y E+    +  ++  H A+L G C    I E+   
Sbjct: 290 KDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFEL 349

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           +  +   NC Q VV YNI+I G  + G + EA+ ++  L +K   P   T+  LI+G CK
Sbjct: 350 WMVMGKENC-QTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCK 408

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL-------------- 436
           NG++  A ++    +    +  A  Y++ ++  C+EG +   ++++              
Sbjct: 409 NGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHV 468

Query: 437 ---------------------QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
                                +EME K   PT V+Y  +IKGLCK  +  EA   +++M 
Sbjct: 469 CNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEML 528

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
                PD IT + ++   C+ K +  A  L  Q      +P    YNIL+ GLC    L+
Sbjct: 529 EKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLE 588

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +A  L   ++        V   T+++      D  KA   +  +++ G    I  Y 
Sbjct: 589 DALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYN 645



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 145/591 (24%), Positives = 278/591 (47%), Gaps = 20/591 (3%)

Query: 5   VYSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTDIMWDLYDDI----KVSET 59
            Y++  M + A+     M+++   K  +++YN+LL      +  WD  +      +  + 
Sbjct: 89  AYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELN-EWDRAESFSRYFESMDV 147

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             N+ T +I+I   C++ +++ AI  L     +   P V S   +++   K+G    A  
Sbjct: 148 SPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALK 207

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH-GVEPDAITYSILAKGF 178
           +F  M   G+  D   YN+LI G    G  ++  E    + +   V P+ +TY+I+  G 
Sbjct: 208 VFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGL 267

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               +   + ++ +++     + D+ TY+ LI G C+ GN++  +++ + ++     ++ 
Sbjct: 268 CKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDA 327

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + ++ +L+  C++G+I E+  L   M     +  +V+Y+ILI+GL +  KV +AI ++  
Sbjct: 328 VTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEEAISIWEL 386

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           +C K   P S  +G ++ GLC+   + +A   F          D   Y+ M+DG  K G 
Sbjct: 387 LCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGR 446

Query: 359 IGEAVQLYRQLIEK--RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           + EA+ +  Q+ ++  ++ P +   N LI GF +  K+ DA      ++  G  P+ V+Y
Sbjct: 447 MDEAISIVNQMDKRGYKLDPHVC--NPLINGFVRASKLEDAINFFREMECKGCSPTIVSY 504

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T +   C+        + ++EM  K   P  +T ++++ GLC++ K++ A+ L +    
Sbjct: 505 NTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALD 564

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G  PD   YN ++   C    L  A QL + M      P   T N L++GL    D + 
Sbjct: 565 KGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEK 624

Query: 537 A----DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           A    DC+L      +I    ++Y   IK  C+   +  A+ F    + +G
Sbjct: 625 ASEIWDCILKDGLHPDI----ISYNITIKGLCSCSRISDAIEFLNDALNRG 671



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 213/418 (50%), Gaps = 4/418 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G   +++ +  +M + + +  + TY+SL++ L    + D    +Y +I  S    +  
Sbjct: 269 KCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAV 328

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T++ +++G C+  +++++   L    GKE   +VVS N ++    + G  E A  ++ L+
Sbjct: 329 THNAMLNGFCRAGKIKES-FELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELL 387

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K G  P++ +Y +LIHGLC  G + +AL+   +      + DA  YS +  G     ++
Sbjct: 388 CKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRM 447

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  ++ ++  +G   D      LI G+ +   +E+ +     M  +G    +++Y+ L
Sbjct: 448 DEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTL 507

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +CK+ R  EA   + EM     KPD++T S+L+ GLC++ K+  A+ L+ +   K  
Sbjct: 508 IKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGF 567

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+   +  ++ GLC    + +A   +  +  S C+ ++V  N +++G  K+ +  +A +
Sbjct: 568 KPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASE 627

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++  +++  + P I+++N  I G C   +++DA   L+     G+ P+AVT+   + A
Sbjct: 628 IWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRA 685



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 208/468 (44%), Gaps = 17/468 (3%)

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
           I G  P + +Y  L+  + ++   +          S     N+  Y++L+   CK  +I+
Sbjct: 109 IFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIE 168

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           +A+ LL  M +  LKPD+ +Y  LI G+ K   +  A+++++EM  + +  +   +  ++
Sbjct: 169 KAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLI 228

Query: 316 LGLCEKEMITEARMYFDSLIMSNCI-QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
            G  +     + +  ++ L+    +  +VV YNIMI+G  K G   E+++++ ++ +   
Sbjct: 229 DGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNER 288

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
              + T++SLI+G C+ G +  A R+   I    L   AVT+   +N +C  G I+    
Sbjct: 289 EKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFE 348

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L   M  K    T V+Y ++IKGL +  K++EA+ + E +   G  P+  TY  +I   C
Sbjct: 349 LWMVM-GKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLC 407

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K   L KA ++  +      +  +  Y+ ++DGLC  G +  A  ++  + +    L   
Sbjct: 408 KNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPH 467

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMM 599
               +I        +  A+ FF +M  KG   +I  Y                 SF   M
Sbjct: 468 VCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEM 527

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           L   + PD   C +++    Q   +     L    +  G  PD  + N
Sbjct: 528 LEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYN 575



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 7/153 (4%)

Query: 453 VVIKGLCKQWKLQEAVQLLEDMY-VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            VIK   K     +A+   ++M  + G  P   +YNT++ +F +  +  +A         
Sbjct: 85  TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFES 144

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
            ++ P   TYNILI   C    ++ A  LL  +   N+     +Y T+I      GD+  
Sbjct: 145 MDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLG 204

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
           A+  F +M  +G    +  Y       ML +GF
Sbjct: 205 ALKVFDEMSVRGVVADVTCYN------MLIDGF 231


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 157/629 (24%), Positives = 289/629 (45%), Gaps = 39/629 (6%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +L+F+ SR   + +A   I  M++L  + +   Y +L+  L   R +D M  L+  ++  
Sbjct: 172 VLSFIKSRK--LREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQEL 229

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NV+  + +I    ++ R+  A+  L E       P VV  N  +  + K G  ++A
Sbjct: 230 GYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMA 289

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              F  M   GL  D  +Y  +I  LC A  + EA+E    M ++   P A  Y+ +  G
Sbjct: 290 WKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMG 349

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIV--------------------------------- 204
           + +  +   A+ ++++   KG  P +V                                 
Sbjct: 350 YGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNL 409

Query: 205 -TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
            TY ++I   C+ G +E  L +R+ M   G   NVI  ++++  +CK+ R+D+A  +   
Sbjct: 410 STYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEG 469

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           ++    +PD VTY  LI GL +  +V +A +LY +M      PN+  + +++    +   
Sbjct: 470 LDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGR 529

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
             +    ++ ++   C  D++L N  +D   K G I +   L++++      P   ++  
Sbjct: 530 KEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTI 589

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI+G  K G   +A  L  T+K  G       Y T ++ +C+ G + +   LL+EM+TK 
Sbjct: 590 LIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKG 649

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             PT VTY  VI GL K  +L EA  L E+    G+  + + Y+++I  F K   + +A+
Sbjct: 650 HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAY 709

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            ++ ++    L P   T+N L+D L    ++  A     S+++   +   + Y+ +I   
Sbjct: 710 LIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGL 769

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           C     +KA  F+ +M ++GF+ ++  YT
Sbjct: 770 CKIRKFNKAFVFWQEMQKQGFKPNVFTYT 798



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 165/598 (27%), Positives = 279/598 (46%), Gaps = 10/598 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRN 62
           + + G V  A     +MK   L +   TY S++  L   D +    +L++ +  ++    
Sbjct: 280 FGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC 339

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            Y  + +I G     + +DA   L+    K   PSVVS N I+S   + G  + A   F 
Sbjct: 340 AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFE 399

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K  + P+  +YNI+I  LC AG +E AL   + M   G+ P+ IT +I+        
Sbjct: 400 EMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQ 458

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A  + + L  K   PD VTY  LI G  + G V+E  KL E ML      N + Y+
Sbjct: 459 RLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYT 518

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+ +  K GR ++   +  EM  +G  PDL+  +  +  + K  ++ K   L+ E+ + 
Sbjct: 519 SLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNL 578

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P++ ++  ++ GL +     EA   F ++    C+ D   YN +IDG+ K G + +A
Sbjct: 579 GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKA 638

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            QL  ++  K   P++VT+ S+I G  K  ++ +A  L +  K  G+E + V Y++ ++ 
Sbjct: 639 YQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDG 698

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           + + G I     +++E+  K + P   T+  ++  L K  ++ EA+   + M  +  TP+
Sbjct: 699 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPN 758

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            ITY+ +I   CK +   KAF    +M     +P   TY  +I GL   G++  AD L  
Sbjct: 759 YITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFE 818

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
             +E         Y  II+          A   F +   KG  I    YTK+  C++L
Sbjct: 819 KFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSI----YTKT--CVVL 870



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 250/526 (47%), Gaps = 4/526 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVSETPRN 62
           Y   G   DA  ++ + +      S+ +YN +L  L      D     ++++K    P N
Sbjct: 350 YGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-N 408

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T +I+ID LC+  +L+ A++           P+V+++N ++ R CK    + A  +F 
Sbjct: 409 LSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFE 468

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +      PDA +Y  LI GL   G ++EA +    M      P+A+ Y+ L + F    
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCG 528

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +     K+  ++L  G  PD++     +    + G +E+G  L + + + GF  +  +Y+
Sbjct: 529 RKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYT 588

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L+  + K+G   EA  L Y M+  G   D   Y+ +I G CK  KV+KA QL  EM +K
Sbjct: 589 ILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P    +G+++ GL + + + EA M F+         +VV+Y+ +IDG+ K+G I EA
Sbjct: 649 GHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +  +L++K ++P++ T+N L+    K  ++++A     ++K     P+ +TY+  ++ 
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHG 768

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+     +     QEM+ +   P   TYT +I GL K   + EA  L E     G   D
Sbjct: 769 LCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
              YN II           A++L  +  L      + T  +L+D L
Sbjct: 829 SAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSL 874



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 128/509 (25%), Positives = 214/509 (42%), Gaps = 54/509 (10%)

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +E+ LE   +M   G  P   T   +   F    ++  A+  IQ +      P    YT 
Sbjct: 149 LEQILE---EMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTN 205

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI       + +  L L + M   G+ +NV  ++ L+    + GR+D AL LL EM++  
Sbjct: 206 LIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNS 265

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           L+PD+V Y++ I    K  KV  A + ++EM          A+G +L             
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKFFHEM---------KANGLVL------------- 303

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
                        D V Y  MI    K   + EAV+L+  + + +  P    +N++I G+
Sbjct: 304 -------------DDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGY 350

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
              GK  DA  LL+  +  G  PS V+Y   ++    +G +   L   +EM+  AI P  
Sbjct: 351 GMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNL 409

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
            TY ++I  LCK  KL+ A+ + + M   G+ P+ IT N ++   CK + L  A  +   
Sbjct: 410 STYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEG 469

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           +      P + TY  LI+GL  +G +  A  L   + + N     V YT++I+     G 
Sbjct: 470 LDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGR 529

Query: 569 VHKAMTFFCQMVEKG---------------FEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
                  + +M+  G               F+    +  ++ F  + + GF PD     +
Sbjct: 530 KEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTI 589

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           ++    + G     +EL   M + G + D
Sbjct: 590 LIHGLVKAGFAHEAYELFYTMKEQGCVLD 618



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/290 (20%), Positives = 112/290 (38%), Gaps = 25/290 (8%)

Query: 355 KLGNIGEAVQLYRQLIEKRISPSI---VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           +L ++  AV  +R    +R++        +NSL+    +  K     ++L+ + + G  P
Sbjct: 106 RLKDVNNAVNYFRW--AERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGP 163

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           S  T    + ++ +   ++     +Q M      P    YT +I  L         + L 
Sbjct: 164 SNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLF 223

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
           + M  +G   +   + T+IR F +   +  A  LL++M  ++LEP    YN+ ID     
Sbjct: 224 QQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKA 283

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           G +  A      ++ + + L  V YT++I   C    +++A+  F  M          D 
Sbjct: 284 GKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHM----------DQ 333

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            K   C    N           M++ +   G     + L     + G +P
Sbjct: 334 NKQVPCAYAYN----------TMIMGYGMAGKFEDAYSLLERQRRKGCIP 373



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 78/197 (39%), Gaps = 21/197 (10%)

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           Q+LE+M + G  P   T   I+ SF K + LR+AF  +  M      P  + Y  LI  L
Sbjct: 151 QILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGAL 210

Query: 529 CVNGDLKNADCLLV---SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
             + D   +DC+L     +QE   ++    +TT+I+    EG V  A++   +M     E
Sbjct: 211 STSRD---SDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLE 267

Query: 586 ISI---------------RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
             +                D    FF  M +NG   D      M+    +   L    EL
Sbjct: 268 PDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVEL 327

Query: 631 AAVMIKSGLLPDKFLIN 647
              M ++  +P  +  N
Sbjct: 328 FEHMDQNKQVPCAYAYN 344


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 249/493 (50%), Gaps = 35/493 (7%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+ S N+++S   + G A  A  ++  M+  G+ PD FSY I+++  C  G ++EA  F
Sbjct: 219 PSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNF 278

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M R   EP+ +TY+ L  G+  L  + GA KV+  +  KG   +  TYT+LI GYC+
Sbjct: 279 VKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCK 338

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G +E+  KL   M+ +   ++   Y VL+ + C +GR+D+AL +   M  VGLK + V 
Sbjct: 339 RGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVI 398

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
            + LI G CK   V+KA ++   M    + P+S+                          
Sbjct: 399 CNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYG------------------------- 433

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                     YN ++DG+ K  +  +A +L  ++  K ++ ++VT+N+L+      G V 
Sbjct: 434 ----------YNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVE 483

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  + + +   G+ P+ VTY T ++A+ + G   R + + ++  +K    +   Y  +I
Sbjct: 484 HALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMI 543

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G CK  KL +A ++   M  +G  PD+ITY T+I  +CK  +L +A +L +      + 
Sbjct: 544 CGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGIS 603

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
            ++  YN LI G+  + +L+  + LL  ++   +S   V Y ++I   C +G + KA   
Sbjct: 604 SSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNA 663

Query: 576 FCQMVEKGFEISI 588
           + +M++KG   +I
Sbjct: 664 YFKMIDKGIAPNI 676



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 137/558 (24%), Positives = 253/558 (45%), Gaps = 35/558 (6%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++I   C   R+ DA+             + V  N++++ YCKLG    A  +   M  +
Sbjct: 366 VLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDW 425

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            L PD++ YN L+ G C      +A +  ++M   GV    +TY+ L K    +  +  A
Sbjct: 426 NLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHA 485

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             +   +  +G  P+ VTY  L+  + ++G  +  + + +  LS+GF  ++  Y+ ++  
Sbjct: 486 LHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICG 545

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            CK  ++ +A  +  +M+ +G  PD +TY  LI G CK   + +A++L +      IS +
Sbjct: 546 FCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSS 605

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           +  + +++ G+   E + +       +       +VV Y  +I G+   G + +A   Y 
Sbjct: 606 TEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYF 665

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL------DTIKLHG------------L 409
           ++I+K I+P+I+  + ++    ++GK+ +A  +L      D I  H             L
Sbjct: 666 KMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHL 725

Query: 410 E-----------------PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           E                  + + Y   +   C+  NI  +  +L ++  K   P + TY 
Sbjct: 726 ETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYC 785

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I       K+ EA  L +DM   G+ P+ + YN +I   CK  +L +A +L N++   
Sbjct: 786 SLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARK 845

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            L PT  TYN LIDG C  G    A  L   ++E  I  + + Y+T+I     EG   ++
Sbjct: 846 GLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQS 905

Query: 573 MTFFCQMVEKGFEISIRD 590
           +    +M++ G   S+ D
Sbjct: 906 VGLLNEMMKAGKGSSVMD 923



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 153/547 (27%), Positives = 245/547 (44%), Gaps = 38/547 (6%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVS 57
           +L   Y   G V DA+ +   M ++ LK++    NSL+     L H +   ++   +K  
Sbjct: 366 VLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDW 425

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               + Y  + ++DG C+Q     A     E   K    +VV+ N ++     +G  E A
Sbjct: 426 NLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHA 485

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             ++ LM K G+ P+  +Y  L+      G+ + A+    D    G       Y+ +  G
Sbjct: 486 LHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICG 545

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F  + ++  A ++  K+   G  PD +TY  LI GYC++GN+ E LKL+++    G   +
Sbjct: 546 FCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSS 605

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              Y+ L++ + +S  + +  GLL EM+   L P++VTY  LI G C +  + KA   Y 
Sbjct: 606 TEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYF 665

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMY--------------------------- 330
           +M  K I+PN      I+  L     I EA +                            
Sbjct: 666 KMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHL 725

Query: 331 --------FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
                   F    MS  I + ++YNI I G  K  NI +  ++   L+ K   P   T+ 
Sbjct: 726 ETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYC 785

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           SLI+     GKV +A  L D +   GL P+ V Y   +N  C+ GN+ R   L  ++  K
Sbjct: 786 SLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARK 845

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + PT VTY  +I G CK  +  EA++L + M   G+ P  ITY+T+I          ++
Sbjct: 846 GLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQS 905

Query: 503 FQLLNQM 509
             LLN+M
Sbjct: 906 VGLLNEM 912



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 162/716 (22%), Positives = 299/716 (41%), Gaps = 97/716 (13%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVS 57
           M+  V++  GM   A+ V   M +     S+++ NSLL NL      +    +Y+ +   
Sbjct: 191 MILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIAL 250

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLN--------------- 102
               ++++ +I+++  C++ R+ +A  F++E       P+VV+ N               
Sbjct: 251 GILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGA 310

Query: 103 ----AIMSR----------------YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
               A+MS                 YCK G  E A+ L   M++  L  D   Y +LIH 
Sbjct: 311 KKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHA 370

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
            C AG +++AL   + M + G++ + +  + L  G+  L  ++ A +V+  +      PD
Sbjct: 371 YCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPD 430

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
              Y  L+ G+C+  +  +  KL + M ++G    V+ Y+ LL ++   G ++ AL +  
Sbjct: 431 SYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWN 490

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
            M   G+ P+ VTY  L+    K     +A+ ++ +  SK  + +   +  ++ G C+ E
Sbjct: 491 LMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKME 550

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            + +A+  F  +       D + Y  +IDGY K+GN+ EA++L        IS S   +N
Sbjct: 551 KLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYN 610

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           SLI G  ++ ++     LL  +K   L P+ VTY + +  +C++G + +      +M  K
Sbjct: 611 SLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDK 670

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP--------------------- 481
            I P  +  + ++  L +  K+ EA  +L    +  + P                     
Sbjct: 671 GIAPNIIIGSKIVSSLYRHGKIDEANLILHQ--IADIDPIAAHAHSVELPKSDLRHLETQ 728

Query: 482 ----------------DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
                           + I YN  I   CK K++    ++L+ + L    P + TY  LI
Sbjct: 729 KIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLI 788

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
                 G +  A CL   +    +    V Y  +I   C  G++ +A   F ++  KG  
Sbjct: 789 HACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLS 848

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            ++  Y                      ++  + +GG      EL   M + G+ P
Sbjct: 849 PTVVTYN--------------------TLIDGYCKGGRTTEALELKDKMREEGICP 884



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 230/488 (47%), Gaps = 18/488 (3%)

Query: 21  KMKELDLKVSIQTYNSLLYNL------RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           +M    +  ++ TYN+LL NL       H   +W+L     V+    N  T   ++D   
Sbjct: 456 EMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAP---NEVTYCTLLDAFF 512

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +      A++  ++   K F  S+   N ++  +CK+     A+ +F  M + G  PD  
Sbjct: 513 KVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEI 572

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +Y  LI G C  G++ EAL+  +   R G+      Y+ L  G     ++     ++ ++
Sbjct: 573 TYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEM 632

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             +   P++VTY  LI G+C  G +++       M+ +G   N+I  S ++SS+ + G+I
Sbjct: 633 KNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKI 692

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ-LYNEMCSKRIS---PNSFA 310
           DEA  +L+++  +    D +        L K D  H   Q + +    K +S    N+  
Sbjct: 693 DEANLILHQIADI----DPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIV 748

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +   + GLC+ + I + R     L++     D   Y  +I     +G + EA  L   +I
Sbjct: 749 YNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMI 808

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
              + P+IV +N+LI G CK+G +  ARRL + +   GL P+ VTY T ++ YC+ G   
Sbjct: 809 NAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTT 868

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             L L  +M  + I P+ +TY+ +I GL  + K +++V LL +M   G     +    + 
Sbjct: 869 EALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG-KGSSVMDPLVA 927

Query: 491 RSFCKCKD 498
           R++ K +D
Sbjct: 928 RAYVKWRD 935



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 196/427 (45%), Gaps = 15/427 (3%)

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
           V + + F  +   + ++L    + G    AL +   M   G  P L + + L+  L +  
Sbjct: 176 VSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNG 235

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +  KA+ +Y +M +  I P+ F++  ++   C++  + EA  +   +  S C  +VV YN
Sbjct: 236 EAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYN 295

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +IDGYV LG++  A ++   + EK I  +  T+  LI G+CK G++  A +L+  +   
Sbjct: 296 SLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEK 355

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
            L      Y   ++AYC  G +   L +   M    +    V    +I G CK   + +A
Sbjct: 356 NLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKA 415

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            ++L  M    + PD   YNT++  FCK +D  KAF+L ++M    +  T  TYN L+  
Sbjct: 416 AEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKN 475

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           L   G +++A  +   + +  ++  +V Y T++ A    G   +AM  +   + KGF  S
Sbjct: 476 LFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKS 535

Query: 588 IRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
           I  Y                +  F  M   GFPPD+     ++  + + G+L    +L  
Sbjct: 536 ITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKD 595

Query: 633 VMIKSGL 639
           +  + G+
Sbjct: 596 MSERDGI 602


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 152/535 (28%), Positives = 246/535 (45%), Gaps = 29/535 (5%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           LC+  + ++A+  L++   +EF P  V    ++S  C+    E A      M      P+
Sbjct: 20  LCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPN 76

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
             +Y IL+ G      +       + M   G  P    ++ L   +      + A+K+++
Sbjct: 77  VLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLK 136

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEG---LKLREV----MLSQGFKLNVIAYSVLL 245
           K++  G  P  V Y +LI G C   + E G   L L E     ML  G  LN +  S   
Sbjct: 137 KMVQCGCQPGYVVYNILIGGICS--SEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFS 194

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +C  G+ ++A  ++ EM + G  PD  TYS +I  LC   KV KA QL+ EM    I+
Sbjct: 195 RCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIA 254

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+ + +  ++   C+   I +AR +FD +    C  +VV Y  +I  Y+K   + +A ++
Sbjct: 255 PDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEV 314

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL---------------- 409
           Y  ++ K  +P+IVT+ +LI G CK GK+  A ++   +K   +                
Sbjct: 315 YEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGAS 374

Query: 410 -EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
            EP+  TY   ++  C+   ++    LL+ M  +   P HV Y  +I G CK  KL EA 
Sbjct: 375 NEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQ 434

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           ++   M   G  P+  TY+++I    K K L  A ++L++M  ++  P    Y  +IDGL
Sbjct: 435 EVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGL 494

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           C  G    A  L+V ++E   +   V YT +I      G V K +    QM  KG
Sbjct: 495 CKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKG 549



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 257/545 (47%), Gaps = 34/545 (6%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI----MSR-YCKLGFAEVAKGLF 121
           +I+I G+C        +L L E A  E   + V LN +     SR  C +G  E A  + 
Sbjct: 151 NILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVI 210

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G  PD  +Y+ +I  LC A  +E+A +   +M R+G+ PD   Y+ L   F   
Sbjct: 211 REMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKA 270

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             I  A     ++   G  P++VTYT LI  Y +   V +  ++ E+MLS+G   N++ Y
Sbjct: 271 GFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTY 330

Query: 242 SVLLSSMCKSGRIDEALGLLYEM-----------------EAVGLKPDLVTYSILIRGLC 284
           + L+  +CK+G+I++A  +   M                 +    +P++ TY  L+ GLC
Sbjct: 331 TALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLC 390

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K  +V +A  L   M  +   PN   + A++ G C+   + EA+  F +++      +V 
Sbjct: 391 KAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVY 450

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            Y+ +ID   K   +  A+++  +++E   +P++V +  +I G CK GK  +A +L+  +
Sbjct: 451 TYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMM 510

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           +  G  P+ VTYT  ++ + + G +++ L LLQ+M +K   P  VTY V+I   C    L
Sbjct: 511 EEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLL 570

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            EA +LLE+M           Y  +I  F   ++   +  L  ++  ++  P +  Y +L
Sbjct: 571 DEAHKLLEEMKQTYWPRHVAGYRKVIEGF--NREFIASLYLSFEISENDSVPVAPVYRVL 628

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVA------YTTIIKAHCAEGDVHKAMTFFCQ 578
           ID     G L+ A    + L E   S +  +      + T+I+         KA   +  
Sbjct: 629 IDNFIKAGRLEIA----LELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYAD 684

Query: 579 MVEKG 583
           M+ +G
Sbjct: 685 MISRG 689



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 245/555 (44%), Gaps = 65/555 (11%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I GLC+ S  ++A+ FL         P+V++   ++            K +  +M+  G
Sbjct: 48  MISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEG 107

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG-- 186
            +P    +N L+H  C +G    A +    M + G +P  + Y+IL  G    S+  G  
Sbjct: 108 CYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGI-CSSEEPGKD 166

Query: 187 ----AWKVIQKLLIKG---SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               A K   ++L  G   +  +I  ++  +CG   IG  E+   +   M+S+GF  +  
Sbjct: 167 VLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCG---IGKFEKAYNVIREMMSKGFIPDTS 223

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            YS ++  +C + ++++A  L  EM+  G+ PD+  Y+ LI   CK   + +A   ++EM
Sbjct: 224 TYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEM 283

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
                +PN   + A++    +   +++A   ++ ++   C  ++V Y  +IDG  K G I
Sbjct: 284 ERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKI 343

Query: 360 GEAVQLYRQLIEKRIS-----------------PSIVTFNSLIYGFCKNGKVADARRLLD 402
            +A Q+Y+ + ++ +                  P++ T+ +L+ G CK  +V +AR LL 
Sbjct: 344 EKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLK 403

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGN--------------------------IQRL---- 432
           ++ + G EP+ V Y   ++  C+ G                           I RL    
Sbjct: 404 SMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDK 463

Query: 433 -----LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
                L +L +M   +  P  V YT +I GLCK  K  EA +L+  M   G  P+ +TY 
Sbjct: 464 RLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYT 523

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            +I  F K   + K  +LL QM      P   TY +LI+  C  G L  A  LL  +++ 
Sbjct: 524 AMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQT 583

Query: 548 NISLTKVAYTTIIKA 562
                   Y  +I+ 
Sbjct: 584 YWPRHVAGYRKVIEG 598



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 228/513 (44%), Gaps = 62/513 (12%)

Query: 28  KVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           KV+I  ++  L  +   +  +++  ++       +  T S VI  LC  S+++ A    Q
Sbjct: 187 KVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQ 246

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           E       P V     ++  +CK GF E A+  F  M + G  P+  +Y  LIH    + 
Sbjct: 247 EMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSR 306

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA---WKVIQKLLIK------- 197
            + +A E    M   G  P+ +TY+ L  G     +I  A   +K+++K  ++       
Sbjct: 307 KVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMH 366

Query: 198 -------GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
                   ++P++ TY  L+ G C+   V+E   L + M  +G + N + Y  L+   CK
Sbjct: 367 FRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCK 426

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           +G++DEA  +   M   G  P++ TYS LI  L K  ++  A+++ ++M     +PN   
Sbjct: 427 AGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPN--- 483

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
                                           VV+Y  MIDG  K+G   EA +L   + 
Sbjct: 484 --------------------------------VVIYTEMIDGLCKVGKTDEAYKLMVMME 511

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           EK  +P++VT+ ++I GF K+G+V     LL  +   G  P+ VTY   +N  C  G + 
Sbjct: 512 EKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLD 571

Query: 431 RLLALLQEMETKAIGPTHVT-YTVVIKGLCKQW--KLQEAVQLLEDMYVIGVTPDQITYN 487
               LL+EM+ +   P HV  Y  VI+G  +++   L  + ++ E+  V    P    Y 
Sbjct: 572 EAHKLLEEMK-QTYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDSV----PVAPVYR 626

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
            +I +F K   L  A +L  +  L +  P SA 
Sbjct: 627 VLIDNFIKAGRLEIALELNEE--LSSFSPFSAA 657



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/524 (23%), Positives = 218/524 (41%), Gaps = 63/524 (12%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           G    A  VI +M          TY+ +   L N    +  + L+ ++K +    +VY  
Sbjct: 201 GKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVY 260

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +ID  C+   ++ A  +  E       P+VV+  A++  Y K      A  ++ +ML 
Sbjct: 261 TTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLS 320

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE-----------------PDAI 169
            G  P+  +Y  LI GLC AG +E+A +    M +  VE                 P+  
Sbjct: 321 KGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVF 380

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           TY  L  G     Q+  A  +++ + ++G +P+ V Y  LI G C+ G ++E  ++   M
Sbjct: 381 TYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTM 440

Query: 230 LSQGFKLNVIAYSVLLS-----------------------------------SMCKSGRI 254
           L  G+  NV  YS L+                                     +CK G+ 
Sbjct: 441 LECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 500

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           DEA  L+  ME  G  P++VTY+ +I G  K  +V K ++L  +M SK  +PN   +  +
Sbjct: 501 DEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVL 560

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           +   C   ++ EA    + +  +   + V  Y  +I+G+ +      ++ L  ++ E   
Sbjct: 561 INHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNR--EFIASLYLSFEISENDS 618

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT----YTTFMNAYCEEGNIQ 430
            P    +  LI  F K G++  A  L +  +L    P +      + T +          
Sbjct: 619 VPVAPVYRVLIDNFIKAGRLEIALELNE--ELSSFSPFSAANQNIHITLIENLSLAHKAD 676

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           +   L  +M ++   P       +IKGL +  + +EA+QLL+ +
Sbjct: 677 KAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 166/367 (45%), Gaps = 8/367 (2%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M + G++++         S+CKSG+  EAL LL + E V   PD V Y+ +I GLC+   
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEKEEFV---PDTVLYTKMISGLCEASL 57

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
             +A+     M +    PN   +  +L G   KE +   +     +I   C     ++N 
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN---GK-VAD-ARRLLDT 403
           ++  Y + G+   A +L +++++    P  V +N LI G C +   GK V D A +    
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +   G+  + V  + F    C  G  ++   +++EM +K   P   TY+ VI  LC   K
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASK 237

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           +++A QL ++M   G+ PD   Y T+I SFCK   + +A    ++M      P   TY  
Sbjct: 238 VEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTA 297

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           LI     +  +  A+ +   +     +   V YT +I   C  G + KA   +  M ++ 
Sbjct: 298 LIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKEN 357

Query: 584 FEISIRD 590
            EI   D
Sbjct: 358 VEIPDVD 364



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 150/334 (44%), Gaps = 8/334 (2%)

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M  +G + D  T       LCK  K  +A+ L  +   +   P++  +  ++ GLCE  +
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASL 57

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
             EA  +   +  S+C+ +V+ Y I++ G +    +G   ++   +I +   PS   FNS
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC-EEGNIQRLLALLQ----E 438
           L++ +C++G  A A +LL  +   G +P  V Y   +   C  E   + +L L +    E
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M    +    V  +   + LC   K ++A  ++ +M   G  PD  TY+ +I   C    
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASK 237

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           + KAFQL  +M  + + P    Y  LID  C  G ++ A      ++    +   V YT 
Sbjct: 238 VEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTA 297

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +I A+     V KA   +  M+ KG   +I  YT
Sbjct: 298 LIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYT 331



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 114/283 (40%), Gaps = 23/283 (8%)

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T     +  CK+GK  +A  LL+        P  V YT  ++  CE    +  +  L  M
Sbjct: 12  TLGCFAHSLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASLFEEAMDFLTRM 68

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
              +  P  +TY +++ G   + KL    ++L  M   G  P    +N+++ ++C+  D 
Sbjct: 69  RASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDY 128

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD-----LKNADCLLVSLQEHNISLTKV 554
             A++LL +M     +P    YNILI G+C + +     L  A+     + E  + L KV
Sbjct: 129 AYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKV 188

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMM 599
             +   +  C  G   KA     +M+ KGF      Y+K                 F  M
Sbjct: 189 NISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEM 248

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             NG  PD  +   ++ +F + G +         M + G  P+
Sbjct: 249 KRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPN 291



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 136/344 (39%), Gaps = 105/344 (30%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV+T   ++DGLC+  ++++A   L+  + +   P+ V  +A++   CK G  + A+ +F
Sbjct: 378 NVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVF 437

Query: 122 CLMLKYGLHPDAFSYNILIH-----------------------------------GLCIA 146
             ML+ G  P+ ++Y+ LI                                    GLC  
Sbjct: 438 TTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKV 497

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G  +EA +    M   G  P+ +TY+ +  GF    ++    +++Q++  KG  P+ VTY
Sbjct: 498 GKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTY 557

Query: 207 TVLICGYCQIGNVEEGLKLREVM--------------LSQGFKLNVIA------------ 240
            VLI   C  G ++E  KL E M              + +GF    IA            
Sbjct: 558 RVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISEND 617

Query: 241 -------YSVLLSSMCKSGRI-------------------------------------DE 256
                  Y VL+ +  K+GR+                                     D+
Sbjct: 618 SVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADK 677

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           A  L  +M + G  P+L     LI+GL + ++  +A+QL + +C
Sbjct: 678 AFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSIC 721


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 211/384 (54%), Gaps = 4/384 (1%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD- 287
           M+ +  + N+  +++ ++ +CK+G++++A  ++ +++A G  P++VTY+ LI G CK+  
Sbjct: 191 MIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGS 250

Query: 288 --KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
             K+++A  +  EM + +I PN      ++ G C+ E +  A+  F+ +       ++V 
Sbjct: 251 AGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVT 310

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN +I+G    G + EA+ L+ +++   + P+IVTFN+LI GFCK   + +AR+L D I 
Sbjct: 311 YNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIA 370

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
              L P+A+T+ T ++A+C+ G ++   AL   M  + I P   TY  +I GLC+   ++
Sbjct: 371 EQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVR 430

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
            A +LL +M    +  D +TYN +I  +CK  +  KA +LL +M    ++P   TYN L+
Sbjct: 431 AAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLM 490

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           DG C+ G+LK A  +   +++       V Y  +IK  C  G +  A     +M+EKG  
Sbjct: 491 DGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLN 550

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQE 609
            +   Y       ML  GF PD E
Sbjct: 551 PNRTTYD-VVRLEMLEKGFIPDIE 573



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 212/408 (51%), Gaps = 3/408 (0%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F  +  YG      S N L+  L       E      +M +  ++P+  T++I   G  
Sbjct: 152 VFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLC 211

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV---MLSQGFKL 236
              +++ A  VI+ +   G  P+IVTY  LI G+C+ G+  +  +   +   ML+     
Sbjct: 212 KAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICP 271

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N I ++ L+   CK   +  A     EM+  GLKP++VTY+ LI GL    K+ +AI L+
Sbjct: 272 NEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALW 331

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           ++M    + PN     A++ G C+K+MI EAR  FD +   + + + + +N MID + K 
Sbjct: 332 DKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKA 391

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G + E   L+  ++++ I P++ T+N LI G C+N  V  A++LL+ ++ + L+   VTY
Sbjct: 392 GMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTY 451

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              +  +C++G   +   LL EM    + P HVTY  ++ G C +  L+ A+++   M  
Sbjct: 452 NILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEK 511

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            G   + +TYN +I+ FCK   L  A +LLN+M    L P   TY+++
Sbjct: 512 EGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 218/433 (50%), Gaps = 6/433 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           ML   Y     +H A  V  ++++   K+S+ + N LL  L     T  M  +Y ++   
Sbjct: 135 MLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKR 194

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE-- 115
               N+ T +I I+GLC+  +L  A   +++     F P++V+ N ++  +CK G A   
Sbjct: 195 RIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKM 254

Query: 116 -VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
             A  +   ML   + P+  ++N LI G C   ++  A     +M R G++P+ +TY+ L
Sbjct: 255 YRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSL 314

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G     ++  A  +  K++  G  P+IVT+  LI G+C+   ++E  KL + +  Q  
Sbjct: 315 INGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDL 374

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             N I ++ ++ + CK+G ++E   L   M   G+ P++ TY+ LI GLC+   V  A +
Sbjct: 375 VPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKK 434

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L NEM +  +  +   +  ++ G C+    ++A      ++      + V YN ++DGY 
Sbjct: 435 LLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYC 494

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
             GN+  A+++  Q+ ++    ++VT+N LI GFCK GK+ DA RLL+ +   GL P+  
Sbjct: 495 MEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRT 554

Query: 415 TYTTFMNAYCEEG 427
           TY        E+G
Sbjct: 555 TYDVVRLEMLEKG 567



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 205/425 (48%), Gaps = 18/425 (4%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N +   +L+ +   +  I  A  +   ++  G K  L + + L+  L K ++  +   +Y
Sbjct: 129 NALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVY 188

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM  +RI PN       + GLC+   + +A    + +       ++V YN +IDG+ K 
Sbjct: 189 KEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKK 248

Query: 357 GNIGE---AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           G+ G+   A  + ++++  +I P+ +TFN+LI GFCK+  V  A+   + ++  GL+P+ 
Sbjct: 249 GSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNI 308

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTY + +N     G +   +AL  +M    + P  VT+  +I G CK+  ++EA +L +D
Sbjct: 309 VTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDD 368

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           +    + P+ IT+NT+I +FCK   + + F L N M    + P  +TYN LI GLC N +
Sbjct: 369 IAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQN 428

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           ++ A  LL  ++ + +    V Y  +I   C +G+  KA     +M+  G + +   Y  
Sbjct: 429 VRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNT 488

Query: 594 --SFFCM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
               +CM             M   G   +     V++  F + G L     L   M++ G
Sbjct: 489 LMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKG 548

Query: 639 LLPDK 643
           L P++
Sbjct: 549 LNPNR 553



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 147/278 (52%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           + +++++      N+ T + +I+GL    +L +AI    +  G    P++V+ NA+++ +
Sbjct: 294 NAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGF 353

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK    + A+ LF  + +  L P+A ++N +I   C AG MEE     N M   G+ P+ 
Sbjct: 354 CKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNV 413

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
            TY+ L  G      +  A K++ ++       D+VTY +LI G+C+ G   +  KL   
Sbjct: 414 STYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGE 473

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           ML+ G K N + Y+ L+   C  G +  AL +  +ME  G + ++VTY++LI+G CK  K
Sbjct: 474 MLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGK 533

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           +  A +L NEM  K ++PN   +  + L + EK  I +
Sbjct: 534 LEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPD 571



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 130/264 (49%), Gaps = 3/264 (1%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNV 63
           S  G + +A+ +  KM  L LK +I T+N+L+       ++ +   L+DDI   +   N 
Sbjct: 319 SNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNA 378

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +ID  C+   +++          +   P+V + N +++  C+      AK L   
Sbjct: 379 ITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNE 438

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M  Y L  D  +YNILI G C  G   +A +   +M   GV+P+ +TY+ L  G+ +   
Sbjct: 439 MENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGN 498

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A KV  ++  +G   ++VTY VLI G+C+ G +E+  +L   ML +G   N   Y V
Sbjct: 499 LKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDV 558

Query: 244 LLSSMCKSGRIDEALGLLYEMEAV 267
           +   M + G I +  G LY + ++
Sbjct: 559 VRLEMLEKGFIPDIEGHLYNISSM 582


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/549 (26%), Positives = 271/549 (49%), Gaps = 21/549 (3%)

Query: 110 KLGFAEVAKGLFCLMLKYGLH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           K    + ++ +  LM + G++  P+AFS  ++ +    AG + +AL+    M R GVEP+
Sbjct: 219 KTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSR--AGQLRDALKVLTLMQRAGVEPN 276

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            +  +     F   +++  A + ++++ + G  P++VTY  +I GYC +  VEE ++L E
Sbjct: 277 LLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLE 336

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQ 286
            M S+G   + ++Y  ++  +CK  RI E   L+ +M +  GL PD VTY+ LI  L K 
Sbjct: 337 DMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKH 396

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
           D   +A+    +   K    +   + AI+  LC++  ++EA+   + +   +C  DVV Y
Sbjct: 397 DHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM---DCPPDVVTY 453

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
             +++G+ +LG + +A +L + +      P+ V++ +L+ G C+ GK  +AR +++  + 
Sbjct: 454 TAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEE 513

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
           H   P+++TY+  M+    EG +     +++EM  K   P  V   ++++ LC+  +  E
Sbjct: 514 HWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHE 573

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A + +E+    G   + + + T+I  FC+  +L  A  +L+ M+L N      TY  L+D
Sbjct: 574 ARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVD 633

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV-------------HKAM 573
            L   G +  A  L+  +    I  T V Y T+I  +C  G V              K  
Sbjct: 634 TLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCR 693

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
           T + Q++EK   +   +   +    +L      D + C  ++  + + G   S +++A  
Sbjct: 694 TIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACR 753

Query: 634 MIKSGLLPD 642
           M    L+PD
Sbjct: 754 MFNRNLIPD 762



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 262/546 (47%), Gaps = 9/546 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNS---LLYNLRHTDIMWDLYDDIKVSETPRN 62
           YSR G + DA+ V+  M+   ++ ++   N+   +       +      + ++V     N
Sbjct: 252 YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPN 311

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +I G C   R+++AI  L++   K   P  VS   IM   CK       + L  
Sbjct: 312 VVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 371

Query: 123 LMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            M K +GL PD  +YN LIH L      +EAL F  D    G   D + YS +       
Sbjct: 372 KMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKE 431

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++S A  +I ++      PD+VTYT ++ G+C++G V++  KL +VM + G K N ++Y
Sbjct: 432 GRMSEAKDLINEM---DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSY 488

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL+ MC++G+  EA  ++   E     P+ +TYS+++ GL ++ K+ +A  +  EM  
Sbjct: 489 TALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVL 548

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   P       +L  LC      EAR + +  +   C  +VV +  +I G+ +   +  
Sbjct: 549 KGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDA 608

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ +   +        + T+ +L+    K G++A+A  L+  +   G++P+ VTY T ++
Sbjct: 609 ALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 668

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC+ G +  L+A+L++M ++    T   Y  VI+ LC   KL+EA  LL  +       
Sbjct: 669 RYCQMGKVDDLVAILEKMISRQKCRT--IYNQVIEKLCVLGKLEEADTLLGKVLRTASRS 726

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D  T   ++  + K      A+++  +M+  NL P       L   L + G +  AD L+
Sbjct: 727 DAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLM 786

Query: 542 VSLQEH 547
           + L E 
Sbjct: 787 LRLVER 792



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/549 (26%), Positives = 259/549 (47%), Gaps = 30/549 (5%)

Query: 67  SIVIDGLCQQSRLQDA--ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           S V+    +  +L+DA  +L L + AG E  P+++  N  +  + +    E A      M
Sbjct: 246 SRVMVSYSRAGQLRDALKVLTLMQRAGVE--PNLLICNTTIDVFVRANRLEKALRFLERM 303

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G+ P+  +YN +I G C    +EEA+E   DM   G  PD ++Y  +        +I
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363

Query: 185 SGAWKVIQKLLIK-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
                +++K+  + G  PD VTY  LI    +  + +E L   +    +GF+++ + YS 
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ ++CK GR+ EA  L+ EM+     PD+VTY+ ++ G C+  +V KA +L   M +  
Sbjct: 424 IVHALCKEGRMSEAKDLINEMDC---PPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 480

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN+ ++ A+L G+C      EAR   +         + + Y++++ G  + G + EA 
Sbjct: 481 HKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEAC 540

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            + R+++ K   P  V  N L+   C++G+  +AR+ ++     G   + V +TT ++ +
Sbjct: 541 DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF 600

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+   +   L++L +M          TYT ++  L K+ ++ EA +L++ M   G+ P  
Sbjct: 601 CQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTP 660

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TY T+I  +C+   +     +L +M   + +     YN +I+ LCV G L+ AD L   
Sbjct: 661 VTYRTVIHRYCQMGKVDDLVAILEKMI--SRQKCRTIYNQVIEKLCVLGKLEEADTL--- 715

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
                  L KV  T       +  D           ++KG  +S         C M +  
Sbjct: 716 -------LGKVLRTA------SRSDAKTCYALMEGYLKKGVPLS----AYKVACRMFNRN 758

Query: 604 FPPDQEICE 612
             PD ++CE
Sbjct: 759 LIPDVKMCE 767


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/469 (30%), Positives = 237/469 (50%), Gaps = 6/469 (1%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           S++S N ++    K+        L+  M   GL P+ F+ NILI+ LC    + E L   
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
             + R G  PD +TY+ L KG  +  +IS A ++  ++   G  P++VTY  LI G C+ 
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209

Query: 217 GNVEEGLKLREVMLSQ------GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
           GN+   LKL + ML+         K N+ +Y++++  +CK G+  EA  L  EM   G++
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR 269

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD+VT+S LI  LCK+  V +A +    M  + I P+ F   +++ G C    +  A+  
Sbjct: 270 PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKEL 329

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           F S+       DV+ Y ++I GY K  N+ EA++LY +++     P + TF  L+ G   
Sbjct: 330 FLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFL 389

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            GKV DA++L   +K H +  +    + F++  C+ G +   + L  E+++  +     +
Sbjct: 390 AGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIES 449

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           +  +I GLCK  KL+ A +L E +   G+ PD +TY  +I  FCK   +  A  L   M 
Sbjct: 450 FNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMME 509

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
            +   P   TY+ L+ G   N  L+    LL  + + ++SL    YT +
Sbjct: 510 ENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIV 558



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 223/421 (52%), Gaps = 6/421 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T + +I GLC + R+ +A             P+VV+   ++   C+ G   +A  L 
Sbjct: 160 DVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLH 219

Query: 122 CLMLK----YGLH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
             ML     Y ++  P+ FSYNI+I  LC  G  +EA    N+M   GV PD +T+S L 
Sbjct: 220 QEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALI 279

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                   +  A K ++ ++++G  PD+ T+T LI G+C +G+++   +L   M S+G++
Sbjct: 280 DTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYE 339

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +VI+Y+VL+   CK+  ++EA+ L  EM  VG  PD+ T+ +L++GL    KV  A +L
Sbjct: 340 PDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKL 399

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +  +    +  N +     L GLC+   + EA   F+ L   N   D+  +N +IDG  K
Sbjct: 400 FGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCK 459

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
              +  A +L+ +L ++ + P +VT+  +I GFCKNG+V +A  L   ++ +G  P+ +T
Sbjct: 460 ARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLT 519

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y+  ++ + +   ++ ++ LL +M  K +      YT+V   + K  K +E + +L+   
Sbjct: 520 YSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQRFP 579

Query: 476 V 476
           V
Sbjct: 580 V 580



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 230/455 (50%), Gaps = 11/455 (2%)

Query: 30  SIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           SI ++N LL     ++H   ++ LY  + ++    N +T +I+I+ LC  +R+++ +  +
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
                + + P VV+  +++   C       A  LF  M K G  P+  +Y  LI GLC  
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209

Query: 147 GSMEEALEFTNDMGRHGVEPDAI-------TYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           G++  AL+   +M  +G  P AI       +Y+I+      + +   A ++  +++ +G 
Sbjct: 210 GNINLALKLHQEM-LNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGV 268

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            PD+VT++ LI   C+ G V E  K  E M+ +G   ++  ++ L+   C  G +D A  
Sbjct: 269 RPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKE 328

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           L   M + G +PD+++Y++LI G CK   V +A++LYNEM      P+      +L GL 
Sbjct: 329 LFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLF 388

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
               + +A+  F  +      +++ + ++ +DG  K G + EA++L+ +L    +   I 
Sbjct: 389 LAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIE 448

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           +FN LI G CK  K+  A  L + +   GL+P  VTY   +N +C+ G +     L Q M
Sbjct: 449 SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMM 508

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           E     P  +TY+ ++ G  K  KL+E V+LL  M
Sbjct: 509 EENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKM 543



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 229/464 (49%), Gaps = 6/464 (1%)

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           S+N+L+  L       +       M   G+ P+  T +IL      ++++      +  +
Sbjct: 93  SFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGI 152

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           + +G  PD+VTYT LI G C    + E  +L   M   G   NV+ Y  L+  +C++G I
Sbjct: 153 MRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNI 212

Query: 255 DEALGLLYEM------EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           + AL L  EM       A+  KP++ +Y+I+I  LCK  K  +A +L+NEM  + + P+ 
Sbjct: 213 NLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDV 272

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
               A++  LC++ M+ EA+ + +++++   + D+  +  +I+G+  +G++  A +L+  
Sbjct: 273 VTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLS 332

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  K   P ++++  LIYG+CK   V +A +L + +   G  P   T+   +      G 
Sbjct: 333 MPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGK 392

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +     L   ++  A+       +V + GLCK   L EA++L  ++    +  D  ++N 
Sbjct: 393 VGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNC 452

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I   CK + L  A++L  ++    L+P   TY I+I+G C NG + NA+ L   ++E+ 
Sbjct: 453 LIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENG 512

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            +   + Y+ ++        + + +    +M++K   ++   YT
Sbjct: 513 CTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYT 556



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 172/404 (42%), Gaps = 61/404 (15%)

Query: 249 CKSGRIDEALGL-LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           CK G I     L  +++    +   ++++++L+  L K     +   LY +M    +SPN
Sbjct: 70  CKKGNITSTQALQFFDL----MMRSIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPN 125

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
            F    ++  LC    + E                  +  IM  GY+             
Sbjct: 126 FFTLNILINCLCNVNRVREGL--------------SAMAGIMRRGYI------------- 158

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
                   P +VT+ SLI G C   ++++A RL   ++  G  P+ VTY T +   C  G
Sbjct: 159 --------PDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTG 210

Query: 428 NIQRLLALLQEM----ETKAIG--PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           NI   L L QEM       AI   P   +Y ++I  LCK  K +EA +L  +M   GV P
Sbjct: 211 NINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRP 270

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D +T++ +I + CK   + +A + L  M L  + P   T+  LI+G C+ GDL +A  L 
Sbjct: 271 DVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELF 330

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------- 591
           +S+         ++YT +I  +C   +V +AM  + +M+  G    ++ +          
Sbjct: 331 LSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLA 390

Query: 592 -----TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
                 K  F ++  +  P +  IC V L    + G L    EL
Sbjct: 391 GKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMEL 434



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 155/351 (44%), Gaps = 37/351 (10%)

Query: 301 SKRISPNSFAHG-AILLGLCEKEMIT--EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           S+RIS     HG  + +  C+K  IT  +A  +FD ++ S     ++ +N+++    K+ 
Sbjct: 54  SERIS---LQHGLPMFIHNCKKGNITSTQALQFFDLMMRS-----IISFNLLLGALAKIK 105

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           +  +   LY+++    +SP+  T N LI   C   +V +    +  I   G  P  VTYT
Sbjct: 106 HYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYT 165

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM--- 474
           + +   C E  I     L   M+     P  VTY  +IKGLC+   +  A++L ++M   
Sbjct: 166 SLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNG 225

Query: 475 ---YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
              Y I   P+  +YN II   CK    ++A +L N+M    + P   T++ LID LC  
Sbjct: 226 TSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKE 285

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           G +  A   L ++    I      +T++I+  C  GD+                    D 
Sbjct: 286 GMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDL--------------------DS 325

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            K  F  M S G+ PD     V++  + +  ++    +L   M++ G  PD
Sbjct: 326 AKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPD 376



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 34/243 (13%)

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           S +++   + A  +  +  ++ +L ++M    + P   T  ++I  LC   +++E +  +
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
             +   G  PD +TY ++I+  C    + +A +L  +M      P   TY  LI GLC  
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209

Query: 532 GDLKNADCLLVSLQEHNISLTK----------VAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           G++     L + L +  ++ T            +Y  II   C  G   +A   F +MV+
Sbjct: 210 GNIN----LALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVD 265

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           +G                      PD      ++    + G +    +    M+  G++P
Sbjct: 266 QGVR--------------------PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVP 305

Query: 642 DKF 644
           D F
Sbjct: 306 DLF 308


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 255/524 (48%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N YT   V+  LC + R+ DA+  L E   +   P     + I+   C+ G    A  
Sbjct: 119 PPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVR 178

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   +   G   D  + N++++ +C  GS++EAL    D+   G EPD ++Y+ + KG  
Sbjct: 179 VLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLC 238

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           +  +     +++++++     P+IVT+  LI   C+ G  E   ++   M+  G   ++ 
Sbjct: 239 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIR 298

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ ++  +CK G ++ A  +L  M + GLKP++V Y+ L++GLC  ++  +  +L  EM
Sbjct: 299 MYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K    +      ++   C+  ++       + ++   C+ DV+ Y  +I+G+ K G I
Sbjct: 359 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLI 418

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EAV L + +      P+ +++  ++ G C   +  DA  L+  +   G   + +T+ T 
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N  C++G +++ + LL++M      P  ++Y+ VI GL K  K  EA++LL  M   G+
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +P+ I Y++I  +  +   + K  Q+ + +    +   +  YN +I  LC  G+ + A  
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            L  +        +  YT +I+   +EG V +A     ++  KG
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 248/529 (46%), Gaps = 44/529 (8%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           NA+++ YC+ G  E A+    L     + P+A++Y  ++  LC  G + +AL   ++M R
Sbjct: 94  NAMVAGYCRAGQLESARR---LAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPR 150

Query: 162 HGVEPDAITYSIL---------------------AKGFHL--------------LSQISG 186
            G  P    Y ++                     A+G  L                 +  
Sbjct: 151 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDE 210

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYC---QIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           A  +++ L   G +PD+V+Y  ++ G C   + G V+E   L E M+      N++ ++ 
Sbjct: 211 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE---LMEEMVRMACPPNIVTFNT 267

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+S +C++G  +    +L +M   G  PD+  Y+ +I G+CK+  +  A ++ N M S  
Sbjct: 268 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 327

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + PN   +  +L GLC  E   E       +   +C  D V +NI++D + + G +   +
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 387

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L  Q++E+   P ++T+ ++I GFCK G + +A  LL ++   G +P+ ++YT  +   
Sbjct: 388 ELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 447

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C          L+ +M  +      +T+  +I  LCK+  +++A++LL+ M V G +PD 
Sbjct: 448 CSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 507

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           I+Y+T+I    K     +A +LLN M    + P +  Y+ +   L   G +     +  +
Sbjct: 508 ISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDN 567

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +Q+  I    V Y  +I + C  G+  +A+ F   MV  G   +   YT
Sbjct: 568 IQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 616



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 226/458 (49%)

Query: 52  DDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
           +D+       +V   ++V++ +C Q  + +A+  L++       P VVS NA++   C  
Sbjct: 181 EDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMA 240

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
                 + L   M++    P+  ++N LI  LC  G  E   E    M  HG  PD   Y
Sbjct: 241 KRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMY 300

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + +  G      +  A +++ ++   G  P++V Y  L+ G C     EE  +L   M  
Sbjct: 301 ATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFD 360

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +   L+ + +++L+   C++G +D  + LL +M   G  PD++TY+ +I G CK+  + +
Sbjct: 361 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDE 420

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A+ L   M +    PN+ ++  +L GLC  E   +A      +I   C  + + +N +I+
Sbjct: 421 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN 480

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
              K G + +A++L +Q++    SP +++++++I G  K GK  +A  LL+ +   G+ P
Sbjct: 481 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSP 540

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + + Y++  +A   EG I +++ +   ++   I    V Y  VI  LCK+ + + A++ L
Sbjct: 541 NTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFL 600

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
             M   G  P++ TY  +IR       +++A ++L ++
Sbjct: 601 AYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 638



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 211/475 (44%), Gaps = 23/475 (4%)

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y+ +  G+    Q+  A ++   + +    P+  TY  ++   C  G + + L + + M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVP---PNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +G       Y V+L + C+ G    A+ +L ++ A G   D+   ++++  +C Q  V 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A+ L  ++ S    P+  ++ A+L GLC  +     +   + ++   C  ++V +N +I
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
               + G      ++  Q++E   +P I  + ++I G CK G +  A  +L+ +  +GL+
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+ V Y T +   C     +    LL EM  K      VT+ +++   C+   +   ++L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           LE M   G  PD ITY T+I  FCK   + +A  LL  M     +P + +Y I++ GLC 
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
                +A+ L+  + +    L  + + T+I   C +G V +A+    Q            
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ------------ 497

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                   ML NG  PD      ++    + G      EL  VM+  G+ P+  +
Sbjct: 498 --------MLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII 544



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 209/437 (47%), Gaps = 3/437 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G V +A+ ++  +     +  + +YN++L  L   +    + +L +++     P N+ T 
Sbjct: 206 GSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTF 265

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I  LC+    +     L +       P +     I+   CK G  EVA  +   M  
Sbjct: 266 NTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS 325

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           YGL P+   YN L+ GLC A   EE  E   +M       D +T++IL   F     +  
Sbjct: 326 YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDR 385

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
             ++++++L +G  PD++TYT +I G+C+ G ++E + L + M + G K N I+Y+++L 
Sbjct: 386 VIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 445

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C + R  +A  L+ +M   G   + +T++ LI  LCK+  V +AI+L  +M     SP
Sbjct: 446 GLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 505

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +  ++  ++ GL +     EA    + ++      + ++Y+ +     + G I + +Q++
Sbjct: 506 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMF 565

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             + +  I    V +N++I   CK G+   A   L  +   G  P+  TYT  +     E
Sbjct: 566 DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASE 625

Query: 427 GNIQRLLALLQEMETKA 443
           G ++    +L E+ +K 
Sbjct: 626 GFVKEAQEMLTELCSKG 642


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 249/520 (47%), Gaps = 10/520 (1%)

Query: 12  VHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKV--SETPRNVYT 65
           V  A+ +   M+E  D    +  YN+L+         D   D++  +K   S  P  V  
Sbjct: 105 VEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSF 164

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           +++VI  LC+ SR  DA+   QE  G      V   N ++   C+LG    A+ L   M 
Sbjct: 165 DTLVI-FLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMT 223

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH-GVEPDAITYSILAKGFHLLSQI 184
            +    DAF+Y IL++  C AG M E   F  ++ RH G    A+ Y+ + +GF    ++
Sbjct: 224 AHACARDAFTYGILVNAHCRAGQMHEVASFM-ELARHDGCALSAVNYNFIIQGFIRCGRL 282

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A ++ +  + K S PD+ TY +LI   C+   +EE L L +     G  L+V  YS L
Sbjct: 283 AEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYL 341

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           + +  K+GR  +AL + Y M+  G  PD V Y++LI  L KQ KV +A++L  +M  K I
Sbjct: 342 MDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGI 401

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+   +  ++  L       +A  +F  +       DVV YN +++G  KL    EA  
Sbjct: 402 MPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACD 461

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+ ++   +  P + TF +LI    K G++ DA      +   G  P++  Y   ++ +C
Sbjct: 462 LFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFC 521

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             G + +   L Q+M   +  P  +TYT+++ G  ++     A++LL++M   G TP   
Sbjct: 522 RSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALA 581

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           TYN +IRS      +  A+ L  +M      P   TY+ L
Sbjct: 582 TYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 138/546 (25%), Positives = 235/546 (43%), Gaps = 24/546 (4%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           +  A++   CKLG  E+   L   + + G+     +    I     AG ++ A+   +DM
Sbjct: 20  TATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDM 79

Query: 160 GRHG-VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK-GSDPDIVTYTVLICGYCQIG 217
            R    +PD + ++        + ++  A  +   +       PD+V Y  LI GYC+ G
Sbjct: 80  RRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAG 139

Query: 218 NVEEGLKLREVMLSQGF-KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           + +  L +   +  +G  K N +++  L+  +CK  R  +AL +  EM   GLK D+   
Sbjct: 140 DGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVC 199

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + LI   C+   + +A +L + M +   + ++F +G ++   C    + E   + +    
Sbjct: 200 NTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARH 259

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
             C    V YN +I G+++ G + EA QL+   + K   P + T+N LI   CK+ ++ +
Sbjct: 260 DGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEE 318

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  L    +  G+     TY+  M+A+ + G   + L +   M+     P  V Y V+I 
Sbjct: 319 ALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLIS 378

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
            L KQ K+ EA++LLEDM   G+ PD  TYN +I     C    KA+     M      P
Sbjct: 379 CLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSP 438

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              TYN L++GL        A  L   +Q +        + T+I      G         
Sbjct: 439 DVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAG--------- 489

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
              +E   E S R         ++  G  P+  I   ++  F + G +   +EL   MI+
Sbjct: 490 --RMEDALEQSAR---------LVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIE 538

Query: 637 SGLLPD 642
               PD
Sbjct: 539 CSCFPD 544



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 235/524 (44%), Gaps = 7/524 (1%)

Query: 73  LCQQSRLQDAI-LF--LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG- 128
           LC+  R++ A+ LF  ++ET   +  P VV+ N +++ YCK G  + A  +F  + + G 
Sbjct: 99  LCEVRRVEQAMTLFDDMRETC--DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGS 156

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P+A S++ L+  LC      +AL    +M   G++ D    + L      L  +  A 
Sbjct: 157 CKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQAR 216

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +++  +       D  TY +L+  +C+ G + E     E+    G  L+ + Y+ ++   
Sbjct: 217 RLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGF 276

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
            + GR+ EA  L          PD+ TY++LI  LCK  ++ +A+ L+ E     +  + 
Sbjct: 277 IRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDV 335

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F +  ++    +     +A   F ++  + C+ D V+YN++I    K G + EA++L   
Sbjct: 336 FTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLED 395

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  K I P   T+N +I      G+   A      +K     P  VTY T +N   +   
Sbjct: 396 MNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRR 455

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
                 L  EM+     P   T+  +I  L K  ++++A++    +  +G  P+   YN 
Sbjct: 456 TDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNA 515

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I  FC+   + K ++L   M   +  P S TY IL+ G    G    A  LL  +    
Sbjct: 516 LISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 575

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            +     Y  +I++    G V  A T F +M+ KGF   ++ Y+
Sbjct: 576 HTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYS 619



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 138/603 (22%), Positives = 248/603 (41%), Gaps = 54/603 (8%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P + +T + ++  +C+  R +     L E   K  G S V+    +  + + G  + A G
Sbjct: 15  PVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLDAAMG 74

Query: 120 LFCLMLKYGL-HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH-GVEPDAITYSILAKG 177
           +   M +     PD  ++   +H LC    +E+A+   +DM       PD + Y+ L  G
Sbjct: 75  MLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAG 134

Query: 178 FHLLSQISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           +        A  + ++L  +GS  P+ V++  L+   C++    + L + + ML  G K 
Sbjct: 135 YCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKA 194

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH------ 290
           +V   + L+   C+ G + +A  LL+ M A     D  TY IL+   C+  ++H      
Sbjct: 195 DVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFM 254

Query: 291 -----------------------------KAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
                                        +A QL+    +K   P+ F +  +L+ LC+ 
Sbjct: 255 ELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYN-LLIALCKS 313

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
           + + EA   F        + DV  Y+ ++D + K G   +A++++  + +    P  V +
Sbjct: 314 KQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVY 373

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N LI    K GKV +A  LL+ +   G+ P   TY   ++     G  ++  +    M+ 
Sbjct: 374 NVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKR 433

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           +   P  VTY  ++ GL K  +  EA  L ++M      PD  T+ T+I +  K   +  
Sbjct: 434 RKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMED 493

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A +   ++      P S  YN LI G C +G +     L   + E +     + YT ++ 
Sbjct: 494 ALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVL 553

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPP 606
                G    AM    +MV +G   ++  Y                 + F  M++ GF P
Sbjct: 554 GFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNP 613

Query: 607 DQE 609
           D +
Sbjct: 614 DMQ 616



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 194/446 (43%), Gaps = 39/446 (8%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVI 70
           DA+ V  +M    LK  +   N+L++      ++     L   +      R+ +T  I++
Sbjct: 179 DALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILV 238

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +  C+  ++ +   F++         S V+ N I+  + + G    A  LF   +     
Sbjct: 239 NAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESV 298

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD F+YN+LI  LC +  +EEAL    +  + GV  D  TYS L   F    + + A +V
Sbjct: 299 PDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEV 357

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF---------------- 234
              +   G  PD V Y VLI    + G V+E L+L E M  +G                 
Sbjct: 358 FYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSS 417

Query: 235 -------------------KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
                                +V+ Y+ LL+ + K  R DEA  L  EM+A    PDL T
Sbjct: 418 CGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTT 477

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           +  LI  L K  ++  A++    +     +PNS+ + A++ G C    + +    F  +I
Sbjct: 478 FGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMI 537

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
             +C  D + Y I++ G+ + G+   A++L ++++ +  +P++ T+N LI      G+V 
Sbjct: 538 ECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVE 597

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMN 421
           DA  L   +   G  P   TY+   N
Sbjct: 598 DAYTLFKEMIAKGFNPDMQTYSALPN 623



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 180/417 (43%), Gaps = 24/417 (5%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           +L  G  ++    + ++  +CK GR +    LL E+   G+    VT +  I+   +   
Sbjct: 9   LLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGD 68

Query: 289 VHKAIQLYNEMCSKRI-SPNSFAHGAILLGLCEKEMITEARMYFDSLIMS-NCIQDVVLY 346
           +  A+ + ++M       P++ A  A +  LCE   + +A   FD +  + +C  DVV Y
Sbjct: 69  LDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAY 128

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLI-EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           N +I GY K G+   A+ ++R+L  E    P+ V+F++L+   CK  +  DA  +   + 
Sbjct: 129 NTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEML 188

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             GL+       T ++  C  G +++   LL  M   A      TY +++   C+  ++ 
Sbjct: 189 GAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMH 248

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           E    +E     G     + YN II+ F +C  L +A QL          P   TYN+LI
Sbjct: 249 EVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI 308

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
             LC +  L+ A  L    ++  + L    Y+ ++ A    G   KA+  F  M + G  
Sbjct: 309 -ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAG-- 365

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                      CM       PD  +  V++    + G +    EL   M + G++PD
Sbjct: 366 -----------CM-------PDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 404



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/315 (21%), Positives = 129/315 (40%), Gaps = 17/315 (5%)

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRI-SPSIVTFNSLIYGFCKNGKVADARRLLDTIK-LH 407
           I  + + G++  A+ +   +       P  V F + ++  C+  +V  A  L D ++   
Sbjct: 60  IQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETC 119

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK-AIGPTHVTYTVVIKGLCKQWKLQE 466
              P  V Y T +  YC+ G+  R L + + ++ + +  P  V++  ++  LCK  +  +
Sbjct: 120 DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 179

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A+ + ++M   G+  D    NT+I   C+   LR+A +LL+ M  H     + TY IL++
Sbjct: 180 ALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVN 239

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
             C  G +      +   +    +L+ V Y  II+     G + +A   F   + K    
Sbjct: 240 AHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVP 299

Query: 587 SIRDY--------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
            +  Y                + F      G   D      ++ AF + G      E+  
Sbjct: 300 DVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFY 359

Query: 633 VMIKSGLLPDKFLIN 647
            M K+G +PD  + N
Sbjct: 360 NMQKAGCMPDTVVYN 374


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 157/629 (24%), Positives = 289/629 (45%), Gaps = 39/629 (6%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +L+F+ SR   + +A   I  M++L  + +   Y +L+  L   R +D M  L+  ++  
Sbjct: 172 VLSFIKSRK--LREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQEL 229

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NV+  + +I    ++ R+  A+  L E       P VV  N  +  + K G  ++A
Sbjct: 230 GYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMA 289

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              F  M   GL  D  +Y  +I  LC A  + EA+E    M ++   P A  Y+ +  G
Sbjct: 290 WKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMG 349

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIV--------------------------------- 204
           + +  +   A+ ++++   KG  P +V                                 
Sbjct: 350 YGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNL 409

Query: 205 -TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
            TY ++I   C+ G +E  L +R+ M   G   NVI  ++++  +CK+ R+D+A  +   
Sbjct: 410 STYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEG 469

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           ++    +PD VTY  LI GL +  +V +A +LY +M      PN+  + +++    +   
Sbjct: 470 LDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGR 529

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
             +    ++ ++   C  D++L N  +D   K G I +   L++++      P   ++  
Sbjct: 530 KEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTI 589

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI+G  K G   +A  L  T+K  G       Y T ++ +C+ G + +   LL+EM+TK 
Sbjct: 590 LIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKG 649

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             PT VTY  VI GL K  +L EA  L E+    G+  + + Y+++I  F K   + +A+
Sbjct: 650 HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAY 709

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            ++ ++    L P   T+N L+D L    ++  A     S+++   +   + Y+ +I   
Sbjct: 710 LIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGL 769

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           C     +KA  F+ +M ++GF+ ++  YT
Sbjct: 770 CKIRKFNKAFVFWQEMQKQGFKPNVFTYT 798



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 165/598 (27%), Positives = 279/598 (46%), Gaps = 10/598 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRN 62
           + + G V  A     +MK   L +   TY S++  L   D +    +L++ +  ++    
Sbjct: 280 FGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC 339

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            Y  + +I G     + +DA   L+    K   PSVVS N I+S   + G  + A   F 
Sbjct: 340 AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFE 399

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K  + P+  +YNI+I  LC AG +E AL   + M   G+ P+ IT +I+        
Sbjct: 400 EMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQ 458

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A  + + L  K   PD VTY  LI G  + G V+E  KL E ML      N + Y+
Sbjct: 459 RLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYT 518

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+ +  K GR ++   +  EM  +G  PDL+  +  +  + K  ++ K   L+ E+ + 
Sbjct: 519 SLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNL 578

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P++ ++  ++ GL +     EA   F ++    C+ D   YN +IDG+ K G + +A
Sbjct: 579 GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKA 638

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            QL  ++  K   P++VT+ S+I G  K  ++ +A  L +  K  G+E + V Y++ ++ 
Sbjct: 639 YQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDG 698

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           + + G I     +++E+  K + P   T+  ++  L K  ++ EA+   + M  +  TP+
Sbjct: 699 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPN 758

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            ITY+ +I   CK +   KAF    +M     +P   TY  +I GL   G++  AD L  
Sbjct: 759 YITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFE 818

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
             +E         Y  II+          A   F +   KG  I    YTK+  C++L
Sbjct: 819 KFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSI----YTKT--CVVL 870



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 250/526 (47%), Gaps = 4/526 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVSETPRN 62
           Y   G   DA  ++ + +      S+ +YN +L  L      D     ++++K    P N
Sbjct: 350 YGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-N 408

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T +I+ID LC+  +L+ A++           P+V+++N ++ R CK    + A  +F 
Sbjct: 409 LSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFE 468

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +      PDA +Y  LI GL   G ++EA +    M      P+A+ Y+ L + F    
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCG 528

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +     K+  ++L  G  PD++     +    + G +E+G  L + + + GF  +  +Y+
Sbjct: 529 RKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYT 588

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L+  + K+G   EA  L Y M+  G   D   Y+ +I G CK  KV+KA QL  EM +K
Sbjct: 589 ILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P    +G+++ GL + + + EA M F+         +VV+Y+ +IDG+ K+G I EA
Sbjct: 649 GHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +  +L++K ++P++ T+N L+    K  ++++A     ++K     P+ +TY+  ++ 
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHG 768

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+     +     QEM+ +   P   TYT +I GL K   + EA  L E     G   D
Sbjct: 769 LCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
              YN II           A++L  +  L      + T  +L+D L
Sbjct: 829 SAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSL 874



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/513 (24%), Positives = 219/513 (42%), Gaps = 74/513 (14%)

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +E+ LE   +M   G  P   T   +   F    ++  A+  IQ +      P    YT 
Sbjct: 149 LEQILE---EMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTN 205

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI       + +  L L + M   G+ +NV  ++ L+    + GR+D AL LL EM++  
Sbjct: 206 LIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNS 265

Query: 269 LKPDL-----------------------------------VTYSILIRGLCKQDKVHKAI 293
           L+PD+                                   VTY+ +I  LCK D++++A+
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAV 325

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           +L+  M   +  P ++A+  +++G        +A    +      CI  VV YN ++   
Sbjct: 326 ELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCL 385

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            + G + EA++ + ++ +  I P++ T+N +I   CK GK+  A  + D +K  GL P+ 
Sbjct: 386 GRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNV 444

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           +T    ++  C+   +    ++ + ++ K   P  VTY  +I+GL +  ++ EA +L E 
Sbjct: 445 ITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQ 504

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW----------------------- 510
           M      P+ + Y ++IR+F KC       ++ N+M                        
Sbjct: 505 MLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564

Query: 511 ----------LHNLE--PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
                     + NL   P + +Y ILI GL   G    A  L  +++E    L   AY T
Sbjct: 565 IEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNT 624

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           +I   C  G V+KA     +M  KG E ++  Y
Sbjct: 625 VIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTY 657



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/290 (20%), Positives = 112/290 (38%), Gaps = 25/290 (8%)

Query: 355 KLGNIGEAVQLYRQLIEKRISPSI---VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           +L ++  AV  +R    +R++        +NSL+    +  K     ++L+ + + G  P
Sbjct: 106 RLKDVNNAVNYFRW--AERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGP 163

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           S  T    + ++ +   ++     +Q M      P    YT +I  L         + L 
Sbjct: 164 SNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLF 223

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
           + M  +G   +   + T+IR F +   +  A  LL++M  ++LEP    YN+ ID     
Sbjct: 224 QQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKA 283

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           G +  A      ++ + + L  V YT++I   C    +++A+  F  M          D 
Sbjct: 284 GKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHM----------DQ 333

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            K   C    N           M++ +   G     + L     + G +P
Sbjct: 334 NKQVPCAYAYN----------TMIMGYGMAGKFEDAYSLLERQRRKGCIP 373


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 224/439 (51%), Gaps = 1/439 (0%)

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G ++EA+E   +M   G+ P   T + + K    +  +  A  +  ++  +G  P+ V+Y
Sbjct: 146 GRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSY 205

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            V++ GYC++GNV E  +    M+ +GF ++    S+++   C+ G +  AL        
Sbjct: 206 RVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCE 265

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           +GL+P+L+ ++ +I GLCK+  V +A ++  EM  +   PN + H A++ GLC+K    +
Sbjct: 266 MGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEK 325

Query: 327 ARMYFDSLIMS-NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           A   F  L+ S N   +V+ Y  MI GY +   +  A  L  ++ E+ ++P+  T+ +LI
Sbjct: 326 AFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLI 385

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G CK G    A  L++ +   G  P+  TY   ++  C++G +Q    +L+      + 
Sbjct: 386 DGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLD 445

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
              VTYT++I   CKQ ++++A+ L   M   G+ PD  +Y T+I  FC+ K ++++   
Sbjct: 446 ADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMF 505

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
             +     L PT+ TY  +I G C  G+L+ A      + +H  +   + Y  +I   C 
Sbjct: 506 FEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCK 565

Query: 566 EGDVHKAMTFFCQMVEKGF 584
           +  + +A   +  M+EKG 
Sbjct: 566 QSKLDEARCLYDAMIEKGL 584



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 246/494 (49%), Gaps = 1/494 (0%)

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
           + K F  +   +  ++  + ++G  + A  +   M   GL P   + N ++  +   G +
Sbjct: 124 SNKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLV 183

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           E A    ++M   GV+P+ ++Y ++  G+  L  +  + + +  ++ +G   D  T +++
Sbjct: 184 EYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLI 243

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           +  +C+ G V   L         G + N+I ++ ++  +CK G + +A  +L EM   G 
Sbjct: 244 VREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGW 303

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMC-SKRISPNSFAHGAILLGLCEKEMITEAR 328
           KP++ T++ LI GLCK+    KA +L+ ++  S+   PN   + A++ G C  E +  A 
Sbjct: 304 KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAE 363

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
           M    +       +   Y  +IDG+ K GN   A +L   + E+  SP++ T+N+++ G 
Sbjct: 364 MLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGL 423

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           CK G+V +A ++L +   +GL+   VTYT  ++ +C++  I++ L L  +M    I P  
Sbjct: 424 CKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDI 483

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
            +YT +I   C++ +++E+    E+    G+ P   TY ++I  +C+  +LR A +  ++
Sbjct: 484 HSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHR 543

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M  H     S TY  LI GLC    L  A CL  ++ E  ++  +V   T+   +C   D
Sbjct: 544 MSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDD 603

Query: 569 VHKAMTFFCQMVEK 582
              AM    ++ +K
Sbjct: 604 GCSAMVVLERLEKK 617



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/561 (25%), Positives = 262/561 (46%), Gaps = 48/561 (8%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++    +  R+++AI  + E   +   PS  +LN ++    ++G  E A+ LF  M   G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 129 LHPDAFSYNILIHGLCIAGSMEE-----------------------------------AL 153
           + P+  SY +++ G C  G++ E                                   AL
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
            +       G+ P+ I ++ + +G      +  A++++++++ +G  P++ T+T LI G 
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 214 CQIGNVEEGLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           C+ G  E+  +L  +++ S+  K NV+ Y+ ++S  C+  +++ A  LL  M+  GL P+
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
             TY+ LI G CK     +A +L N M  +  SPN   + AI+ GLC+K  + EA     
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLK 437

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
           S   +    D V Y I+I  + K   I +A+ L+ ++++  I P I ++ +LI  FC+  
Sbjct: 438 SGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREK 497

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           ++ ++    +     GL P+  TYT+ +  YC EGN++  L     M         +TY 
Sbjct: 498 RMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYG 557

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF----QLLNQ 508
            +I GLCKQ KL EA  L + M   G+TP ++T  T+   +CK  D   A     +L  +
Sbjct: 558 ALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKK 617

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           +W+        T N L+  LC    +  A      L + + ++ +V     + A C E +
Sbjct: 618 LWVR-------TVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTA-CYESN 669

Query: 569 VHKAMTFFCQMVEKGFEISIR 589
            +  ++     + K   ++I+
Sbjct: 670 KYDLVSDLSARIYKENHLAIK 690



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 235/498 (47%), Gaps = 42/498 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRN 62
           ++  G V +A+ ++ +M    L  S +T N    ++  +   +   +L+D++       N
Sbjct: 142 FAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPN 201

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +  +++ G C+   + ++  +L     + F     +L+ I+  +C+ GF   A   F 
Sbjct: 202 CVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFR 261

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL-------- 174
              + GL P+  ++  +I GLC  GS+++A E   +M   G +P+  T++ L        
Sbjct: 262 RFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKG 321

Query: 175 --AKGFHLL-----------------SQISG---------AWKVIQKLLIKGSDPDIVTY 206
              K F L                  + ISG         A  ++ ++  +G  P+  TY
Sbjct: 322 WTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTY 381

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T LI G+C+ GN E   +L  VM  +GF  NV  Y+ ++  +CK GR+ EA  +L     
Sbjct: 382 TTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFR 441

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            GL  D VTY+ILI   CKQ ++ +A+ L+N+M    I P+  ++  ++   C ++ + E
Sbjct: 442 NGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKE 501

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           + M+F+  +    +     Y  MI GY + GN+  A++ + ++ +   +   +T+ +LI 
Sbjct: 502 SEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALIS 561

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G CK  K+ +AR L D +   GL P  VT  T    YC+  +    + +L+ +E K    
Sbjct: 562 GLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKKLWVR 621

Query: 447 THVTYTVVIKGLCKQWKL 464
              T   +++ LC + K+
Sbjct: 622 ---TVNTLVRKLCSERKV 636



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 203/415 (48%), Gaps = 16/415 (3%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ S  + GR+ EA+ ++ EM   GL P   T + +++ + +   V  A  L++EMC++ 
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + PN  ++  +++G C+   + E+  +   +I    + D    ++++  + + G +  A+
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
             +R+  E  + P+++ F  +I G CK G V  A  +L+ +   G +P+  T+T  ++  
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 424 CEEGNIQRLLAL-LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           C++G  ++   L L+ + ++   P  +TYT +I G C+  K+  A  LL  M   G+ P+
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             TY T+I   CK  +  +A++L+N M      P   TYN ++DGLC  G ++ A  +L 
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLK 437

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------- 592
           S   + +   KV YT +I  HC + ++ +A+  F +MV+ G +  I  YT          
Sbjct: 438 SGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREK 497

Query: 593 -----KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                + FF   +  G  P  +    M+  + + G+L    +    M   G   D
Sbjct: 498 RMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASD 552



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 208/449 (46%), Gaps = 16/449 (3%)

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           ++  + +IG V+E +++   M +QG   +    + ++  + + G ++ A  L  EM A G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           ++P+ V+Y +++ G CK   V ++ +    M  +    ++     I+   CEK  +T A 
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
            YF          +++ +  MI+G  K G++ +A ++  +++ +   P++ T  +LI G 
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 389 CKNGKVADARRL-LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           CK G    A RL L  ++    +P+ +TYT  ++ YC +  + R   LL  M+ + + P 
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TYT +I G CK    + A +L+  M   G +P+  TYN I+   CK   +++A+++L 
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLK 437

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
             + + L+    TY ILI   C   ++K A  L   + +  I     +YTT+I   C E 
Sbjct: 438 SGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREK 497

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICE 612
            + ++  FF + V  G   + + YT                 FF  M  +G   D     
Sbjct: 498 RMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYG 557

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            ++    +   L     L   MI+ GL P
Sbjct: 558 ALISGLCKQSKLDEARCLYDAMIEKGLTP 586



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 189/377 (50%), Gaps = 5/377 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           NVYT++ +IDGLC++   + A  LFL+    +   P+V++  A++S YC+      A+ L
Sbjct: 306 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEML 365

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M + GL P+  +Y  LI G C AG+ E A E  N M   G  P+  TY+ +  G   
Sbjct: 366 LSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCK 425

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             ++  A+KV++     G D D VTYT+LI  +C+   +++ L L   M+  G + ++ +
Sbjct: 426 KGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHS 485

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L++  C+  R+ E+     E    GL P   TY+ +I G C++  +  A++ ++ M 
Sbjct: 486 YTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMS 545

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
               + +S  +GA++ GLC++  + EAR  +D++I        V    +   Y K+ + G
Sbjct: 546 DHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDD-G 604

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            +  +  + +EK++   + T N+L+   C   KV  A      +       + VT   FM
Sbjct: 605 CSAMVVLERLEKKL--WVRTVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFM 662

Query: 421 NAYCEEGNIQRLLALLQ 437
            A C E N   L++ L 
Sbjct: 663 TA-CYESNKYDLVSDLS 678


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 255/524 (48%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N YT   V+  LC + R+ DA+  L E   +   P     + I+   C+ G    A  
Sbjct: 156 PPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVR 215

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   +   G   D  + N++++ +C  GS++EAL    D+   G EPD ++Y+ + KG  
Sbjct: 216 VLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLC 275

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           +  +     +++++++     P+IVT+  LI   C+ G  E   ++   M+  G   ++ 
Sbjct: 276 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIR 335

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ ++  +CK G ++ A  +L  M + GLKP++V Y+ L++GLC  ++  +  +L  EM
Sbjct: 336 MYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 395

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K    +      ++   C+  ++       + ++   C+ DV+ Y  +I+G+ K G I
Sbjct: 396 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLI 455

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EAV L + +      P+ +++  ++ G C   +  DA  L+  +   G   + +T+ T 
Sbjct: 456 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 515

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N  C++G +++ + LL++M      P  ++Y+ VI GL K  K  EA++LL  M   G+
Sbjct: 516 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 575

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +P+ I Y++I  +  +   + K  Q+ + +    +   +  YN +I  LC  G+ + A  
Sbjct: 576 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 635

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            L  +        +  YT +I+   +EG V +A     ++  KG
Sbjct: 636 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 247/529 (46%), Gaps = 44/529 (8%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           NA+++ YC+ G  E A+    L     + P+A++Y  ++  LC  G + +AL   ++M R
Sbjct: 131 NAMVAGYCRAGQLESARR---LAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPR 187

Query: 162 HGVEPDAITYSIL---------------------AKGFHL--------------LSQISG 186
            G  P    Y ++                     A+G  L                 +  
Sbjct: 188 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDE 247

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYC---QIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           A  +++ L   G +PD+V+Y  ++ G C   + G V+E   L E M+      N++ ++ 
Sbjct: 248 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE---LMEEMVRMACPPNIVTFNT 304

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+S +C++G  +    +L +M   G  PD+  Y+ +I G+CK+  +  A ++ N M S  
Sbjct: 305 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 364

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + PN   +  +L GLC  E   E       +   +C  D V +NI++D + + G +   +
Sbjct: 365 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 424

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L  Q++E    P ++T+ ++I GFCK G + +A  LL ++   G +P+ ++YT  +   
Sbjct: 425 ELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 484

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C          L+ +M  +      +T+  +I  LCK+  +++A++LL+ M V G +PD 
Sbjct: 485 CSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 544

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           I+Y+T+I    K     +A +LLN M    + P +  Y+ +   L   G +     +  +
Sbjct: 545 ISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDN 604

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +Q+  I    V Y  +I + C  G+  +A+ F   MV  G   +   YT
Sbjct: 605 IQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 653



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 226/458 (49%)

Query: 52  DDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
           +D+       +V   ++V++ +C Q  + +A+  L++       P VVS NA++   C  
Sbjct: 218 EDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMA 277

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
                 + L   M++    P+  ++N LI  LC  G  E   E    M  HG  PD   Y
Sbjct: 278 KRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMY 337

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + +  G      +  A +++ ++   G  P++V Y  L+ G C     EE  +L   M  
Sbjct: 338 ATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFD 397

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +   L+ + +++L+   C++G +D  + LL +M   G  PD++TY+ +I G CK+  + +
Sbjct: 398 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDE 457

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A+ L   M +    PN+ ++  +L GLC  E   +A      +I   C  + + +N +I+
Sbjct: 458 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN 517

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
              K G + +A++L +Q++    SP +++++++I G  K GK  +A  LL+ +   G+ P
Sbjct: 518 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSP 577

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + + Y++  +A   EG I +++ +   ++   I    V Y  VI  LCK+ + + A++ L
Sbjct: 578 NTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFL 637

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
             M   G  P++ TY  +IR       +++A ++L ++
Sbjct: 638 AYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 675



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 211/475 (44%), Gaps = 23/475 (4%)

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y+ +  G+    Q+  A ++   + +    P+  TY  ++   C  G + + L + + M 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVP---PNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +G       Y V+L + C+ G    A+ +L ++ A G   D+   ++++  +C Q  V 
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A+ L  ++ S    P+  ++ A+L GLC  +     +   + ++   C  ++V +N +I
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
               + G      ++  Q++E   +P I  + ++I G CK G +  A  +L+ +  +GL+
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+ V Y T +   C     +    LL EM  K      VT+ +++   C+   +   ++L
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           LE M   G  PD ITY T+I  FCK   + +A  LL  M     +P + +Y I++ GLC 
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
                +A+ L+  + +    L  + + T+I   C +G V +A+    Q            
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ------------ 534

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                   ML NG  PD      ++    + G      EL  VM+  G+ P+  +
Sbjct: 535 --------MLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII 581



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 208/437 (47%), Gaps = 3/437 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G V +A+ ++  +     +  + +YN++L  L   +    + +L +++     P N+ T 
Sbjct: 243 GSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTF 302

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I  LC+    +     L +       P +     I+   CK G  EVA  +   M  
Sbjct: 303 NTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS 362

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           YGL P+   YN L+ GLC A   EE  E   +M       D +T++IL   F     +  
Sbjct: 363 YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDR 422

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
             ++++++L  G  PD++TYT +I G+C+ G ++E + L + M + G K N I+Y+++L 
Sbjct: 423 VIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 482

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C + R  +A  L+ +M   G   + +T++ LI  LCK+  V +AI+L  +M     SP
Sbjct: 483 GLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 542

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +  ++  ++ GL +     EA    + ++      + ++Y+ +     + G I + +Q++
Sbjct: 543 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMF 602

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             + +  I    V +N++I   CK G+   A   L  +   G  P+  TYT  +     E
Sbjct: 603 DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASE 662

Query: 427 GNIQRLLALLQEMETKA 443
           G ++    +L E+ +K 
Sbjct: 663 GFVKEAQEMLTELCSKG 679


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 227/450 (50%), Gaps = 18/450 (4%)

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L K   +++++   + V+ K  I+   P IVT+  ++   C+ G V   +++ +VM   G
Sbjct: 181 LLKDKSMVNEVEEVYSVMIKCQIR---PTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFG 237

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              N ++Y+VL++ +   G  D A  L+ +M  +GLK    TY+ LIRG CK++   +A 
Sbjct: 238 CDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEAN 297

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            L  EM  +   P    +  I+  LC    +++AR Y D ++  + + D+V YN +I GY
Sbjct: 298 DLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGY 357

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            +LGN  EA+ L+ +L  K + PS+VT+N+LI G C+ G +  A+ + D +  HGL P  
Sbjct: 358 SRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDV 417

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VT+T  +  +C+ GN+     L  EM ++ + P  + YT  I G  K     +A  + E+
Sbjct: 418 VTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEE 477

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G  PD ITYN +I   CK  +   A +L+ +M L  + P   TY  +I    ++G 
Sbjct: 478 MKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGL 537

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           L+ A+ +   + +  I  + V YT +I ++   G +  A  +F +M +KG   ++  Y  
Sbjct: 538 LRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNA 597

Query: 594 ---------------SFFCMMLSNGFPPDQ 608
                          + F  M S G  P++
Sbjct: 598 LIYGLCKENMMDVAYNLFAEMESKGVSPNK 627



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 223/431 (51%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P++V+ N +M   CK G    A  +  +M  +G  P+  SYN+L++GL   G  + A E 
Sbjct: 205 PTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKEL 264

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M   G++  A TY+ L +GF        A  + +++L +G+ P +VTY  ++   C+
Sbjct: 265 IEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCR 324

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +G V +  +  +VM+++    ++++Y+ L+    + G   EAL L  E+ +  L P +VT
Sbjct: 325 LGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVT 384

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G C+   +  A  + ++M    + P+      ++ G C+   +  A+  FD ++
Sbjct: 385 YNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEML 444

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D + Y   I G +KLGN  +A  +  ++  +   P ++T+N LI G CK G   
Sbjct: 445 SRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFD 504

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           DA  L+  ++L G+ P  VTYT+ ++A+   G +++   +  +M  K I P+ VTYTV+I
Sbjct: 505 DANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLI 564

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
                + +L  A +  ++M   GV+P+ ITYN +I   CK   +  A+ L  +M    + 
Sbjct: 565 HSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVS 624

Query: 516 PTSATYNILID 526
           P   TY ILI+
Sbjct: 625 PNKYTYTILIN 635



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 224/455 (49%), Gaps = 7/455 (1%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P +V  N ++++GL  +     A   +++ +      S  + N ++  +CK    E A  
Sbjct: 240 PNDVSYN-VLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEAND 298

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   ML  G  P   +YN +++ LC  G + +A  + + M    + PD ++Y+ L  G+ 
Sbjct: 299 LRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYS 358

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
            L   + A  +  +L  K   P +VTY  LI G C+ GN++    +++ M+  G   +V+
Sbjct: 359 RLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVV 418

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            +++L+   C+ G +  A  L  EM + GLKPD + Y+  I G  K     KA  +  EM
Sbjct: 419 TFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEM 478

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            ++   P+   +  ++ GLC+     +A      + +   + D V Y  +I  ++  G +
Sbjct: 479 KAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLL 538

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A +++  +++K I PS+VT+  LI+ +   G++  A++  D ++  G+ P+ +TY   
Sbjct: 539 RKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNAL 598

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +   C+E  +     L  EME+K + P   TYT++I         Q+A++L +DM    +
Sbjct: 599 IYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREI 658

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
            PD  T++ ++      K L K ++LL  + L NL
Sbjct: 659 KPDSCTHSALM------KHLSKDYKLLAVLRLENL 687



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 193/426 (45%), Gaps = 50/426 (11%)

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           ++P +VT++ ++   CK+ +V +A+++ + M      PN  ++  ++ GL  K     A+
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAK 262

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
              + + M         YN +I G+ K     EA  L R+++ +   P++VT+N+++Y  
Sbjct: 263 ELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSL 322

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C+ G+V+DARR LD +    L P  V+Y T +  Y   GN    L L  E+ +K + P+ 
Sbjct: 323 CRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSV 382

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL--------- 499
           VTY  +I G C+   L  A  + +DM   G+ PD +T+  ++R FC+  +L         
Sbjct: 383 VTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDE 442

Query: 500 --------------------------RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
                                      KAF +  +M      P   TYN+LI+GLC  G+
Sbjct: 443 MLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGN 502

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT- 592
             +A+ L+  ++   I    V YT+II AH   G + KA   F  M++KG   S+  YT 
Sbjct: 503 FDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTV 562

Query: 593 --------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
                         K +F  M   G  P+      ++    +   +   + L A M   G
Sbjct: 563 LIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKG 622

Query: 639 LLPDKF 644
           + P+K+
Sbjct: 623 VSPNKY 628



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 192/393 (48%), Gaps = 32/393 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           R G V DA   +  M   DL   + +YN+L+Y                            
Sbjct: 324 RLGRVSDARRYLDVMVNEDLMPDLVSYNTLIY---------------------------- 355

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
               G  +     +A+L   E   K   PSVV+ N ++   C+ G  ++AKG+   M+K+
Sbjct: 356 ----GYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKH 411

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           GL PD  ++ IL+ G C  G++  A E  ++M   G++PD I Y+    G   L   S A
Sbjct: 412 GLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKA 471

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           + + +++  +G  PD++TY VLI G C++GN ++  +L + M  +G   + + Y+ ++ +
Sbjct: 472 FGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHA 531

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
              SG + +A  +  +M   G+ P +VTY++LI     + ++  A + ++EM  K +SPN
Sbjct: 532 HLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPN 591

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              + A++ GLC++ M+  A   F  +       +   Y I+I+    L    +A++LY+
Sbjct: 592 VITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYK 651

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            ++++ I P   T ++L+    K+ K+    RL
Sbjct: 652 DMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL 684



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 161/323 (49%), Gaps = 5/323 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSE 58
           L + YSR G   +A+ + ++++  +L  S+ TYN+L+     T   DI   + DD+    
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +V T +I++ G CQ   L  A     E   +   P  ++    +    KLG    A 
Sbjct: 413 LCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAF 472

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
           G+   M   G  PD  +YN+LI+GLC  G+ ++A E    M   G+ PD +TY+ +    
Sbjct: 473 GMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHA- 531

Query: 179 HLLSQ-ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           HL+S  +  A +V   +L KG  P +VTYTVLI  Y   G ++   K  + M  +G   N
Sbjct: 532 HLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPN 591

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           VI Y+ L+  +CK   +D A  L  EME+ G+ P+  TY+ILI           A++LY 
Sbjct: 592 VITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYK 651

Query: 298 EMCSKRISPNSFAHGAILLGLCE 320
           +M  + I P+S  H A++  L +
Sbjct: 652 DMLDREIKPDSCTHSALMKHLSK 674



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 184/380 (48%), Gaps = 15/380 (3%)

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           +LI+   K+  + K + ++ +M +  + P+      +L  L +K M+ E    +  +I  
Sbjct: 142 LLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKC 201

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
                +V +N M+D   K G +G AV++   +      P+ V++N L+ G    G+   A
Sbjct: 202 QIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRA 261

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
           + L++ + + GL+ SA TY   +  +C++   +    L +EM  +   PT VTY  ++  
Sbjct: 262 KELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYS 321

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LC+  ++ +A + L+ M    + PD ++YNT+I  + +  +  +A  L +++   NL P+
Sbjct: 322 LCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPS 381

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             TYN LIDG C  G+L  A  +   + +H +    V +T +++  C  G++  A   F 
Sbjct: 382 VVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFD 441

Query: 578 QMVEKGF-------------EISIRDYTKSFFCM--MLSNGFPPDQEICEVMLIAFHQGG 622
           +M+ +G              E+ + + +K+F     M + GFPPD     V++    + G
Sbjct: 442 EMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLG 501

Query: 623 DLGSVFELAAVMIKSGLLPD 642
           +     EL   M   G++PD
Sbjct: 502 NFDDANELVQKMRLEGIVPD 521


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 147/551 (26%), Positives = 265/551 (48%), Gaps = 20/551 (3%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           LY ++ V E   + Y+  +++ GLC + R+++    ++   G+   P  V  N ++  YC
Sbjct: 68  LYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYC 127

Query: 110 KLGFAEVAKGLFCL--MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           + G  ++ +GL  L  M   G+ P   +Y  +IH L   G + +      +M   G+ P+
Sbjct: 128 RRG--DIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPN 185

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
              Y+ +          S A  ++ +++    +PD+VT+  +I G+C+ G+V E LKL  
Sbjct: 186 VQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLR 245

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
             + +G + N ++Y+ L+   C  G    A  LL EM   G  PD++T   LI GL    
Sbjct: 246 EAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSG 305

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +V+ A+ +  +M  +++ P++  +  ++ GLC+K M++ A+   + ++      D  +Y 
Sbjct: 306 QVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYT 365

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +IDG+V+   + +A +++ + +E++  P IV +N +I G+CK G + +A   + +++  
Sbjct: 366 TLIDGFVRSDKLSDARKIF-EFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKA 424

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G  P   TYTT ++ Y ++G+I   L LL +M  +   P   TY  +I G C       A
Sbjct: 425 GCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSA 484

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
             L   M   G+ P+ + Y  +I S  K   + +A      M L++  P  AT + L++G
Sbjct: 485 EDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNG 544

Query: 528 L--CVNG-------DLKNAD------CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
           L  C +G       D K A        +   L    +     AY  II + C    + KA
Sbjct: 545 LVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKA 604

Query: 573 MTFFCQMVEKG 583
           M    +M  KG
Sbjct: 605 MDLKDKMSNKG 615



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 229/484 (47%), Gaps = 27/484 (5%)

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
           HG  PDA   + L +      +   A  +  ++L++    D  +  V++ G C  G VEE
Sbjct: 40  HGALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEE 99

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
           G  L E    +G     + Y+VL+   C+ G I   L LL EME  G+ P +VTY  +I 
Sbjct: 100 GRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIH 159

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
            L ++  + K   L  EM ++ +SPN   +  ++  LC+    ++A    + ++ S    
Sbjct: 160 WLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNP 219

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           DVV +N MI G+ + G++ EA++L R+ I + + P+ +++  LI+GFC  G+   A  LL
Sbjct: 220 DVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLL 279

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +   G  P  +T    ++     G +   L + ++M  + + P    Y V+I GLCK+
Sbjct: 280 VEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKK 339

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC---KCKDLRKAFQLLNQMWLHNLEPTS 518
             L  A  LLE+M    V PD+  Y T+I  F    K  D RK F+ + +       P  
Sbjct: 340 RMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC----PDI 395

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
             YN++I G C  G +K A   + S+++      +  YTT++  +  +GD+  ++   C 
Sbjct: 396 VAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCD 455

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
           M+++  + +I  Y  S  C     G+      C +        GD  S  +L A M   G
Sbjct: 456 MMKRRCKPNIFTYA-SLIC-----GY------CNI--------GDTYSAEDLFAKMQSEG 495

Query: 639 LLPD 642
           L P+
Sbjct: 496 LFPN 499



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 225/492 (45%), Gaps = 28/492 (5%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNV 63
            R G +     ++ +M+   L  ++Q YN+++  L   R      D+ + +  S    +V
Sbjct: 162 GRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDV 221

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +I G C++  +++A+  L+E   +   P+ +S   ++  +C  G A VA  L   
Sbjct: 222 VTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVE 281

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G  PD  +   LIHGL ++G + +AL     M    V PDA  Y++L  G      
Sbjct: 282 MMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRM 341

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +S A  +++++L +   PD   YT LI G+ +   + +  K+ E M  +    +++AY+V
Sbjct: 342 LSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACP-DIVAYNV 400

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++   CK G + EA+  +  M   G  PD  TY+ L+ G  K+  +  +++L  +M  +R
Sbjct: 401 MIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRR 460

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN F + +++ G C       A   F  +       +VV Y ++I    K   + +A 
Sbjct: 461 CKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAA 520

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGF--CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
             +  ++     P+  T + L+ G   C++G V   R   DT + H  E SA        
Sbjct: 521 AYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRS--DTKQAH--EKSA-------- 568

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
                     LL + + + +  + P    Y  +I  LC+   L +A+ L + M   G  P
Sbjct: 569 ----------LLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLP 618

Query: 482 DQITYNTIIRSF 493
           D IT+ +++  F
Sbjct: 619 DPITFLSLLYGF 630



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 169/369 (45%), Gaps = 14/369 (3%)

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A  LY EM  +    + ++   ++ GLC +  + E R   ++     C+   V YN++
Sbjct: 63  ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           IDGY + G+IG  + L  ++  K I P++VT+ ++I+   + G +     LL  ++  GL
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P+   Y T +NA C+  +  +   +L +M      P  VT+  +I G C++  ++EA++
Sbjct: 183 SPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALK 242

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           LL +    G+ P+Q++Y  +I  FC   +   A  LL +M      P   T   LI GL 
Sbjct: 243 LLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLV 302

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
           V+G + +A  +   + E  +      Y  +I   C +  +  A     +M+E+  +    
Sbjct: 303 VSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKF 362

Query: 590 DYTKSFFCMMLSNGFPPDQEICE--------------VMLIAFHQGGDLGSVFELAAVMI 635
            YT      + S+     ++I E              VM+  + + G +       + M 
Sbjct: 363 IYTTLIDGFVRSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMR 422

Query: 636 KSGLLPDKF 644
           K+G +PD+F
Sbjct: 423 KAGCIPDEF 431



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 136/300 (45%), Gaps = 15/300 (5%)

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A  LY +++ +       +   ++ G C  G+V + R L++     G  P AV Y   +
Sbjct: 64  RARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLI 123

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + YC  G+I R L LL EMETK I PT VTY  +I  L ++  L +   LL +M   G++
Sbjct: 124 DGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLS 183

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+   YNT+I + CKC+   +A  +LNQM      P   T+N +I G C  GD++ A  L
Sbjct: 184 PNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKL 243

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
           L       +   +++YT +I   C  G+   A     +M+ +G    +         +++
Sbjct: 244 LREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVV 303

Query: 601 SNGFP---------------PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           S                   PD  I  V++    +   L +   L   M++  + PDKF+
Sbjct: 304 SGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFI 363



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 20/239 (8%)

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           LHG  P A      +    E    +R   L  EM  +  G    +  V+++GLC + +++
Sbjct: 39  LHGALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVE 98

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           E   L+E  +  G  P  + YN +I  +C+  D+ +   LL +M    + PT  TY  +I
Sbjct: 99  EGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAII 158

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
             L   GDL   + LL  ++   +S     Y T+I A C      +A     QMV+  F 
Sbjct: 159 HWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFN 218

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                               PD      M+  F + GD+    +L    I+ GL P++ 
Sbjct: 219 --------------------PDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQL 257


>gi|14488297|gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
 gi|222612440|gb|EEE50572.1| hypothetical protein OsJ_30721 [Oryza sativa Japonica Group]
          Length = 854

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 156/585 (26%), Positives = 281/585 (48%), Gaps = 14/585 (2%)

Query: 9   TGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTDI--MWDLYDDIKVSETPRNVYT 65
            GM  +A+ V+A+++   D          L    R  ++   W +++++       N+  
Sbjct: 169 AGMADEALDVLARVRRAGDTPSLSALAALLRLLFRGGEVRAAWKVFEEMAARGPRPNLAI 228

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + +I GLC +  ++ +   L         P   S N +M  +C  G AE A  LF  M 
Sbjct: 229 FNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYNILMKGHCLYGQAEDAFNLFDEMR 288

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G  P   +YNIL++ LC  G M EA    ++M + GVE + IT+++L  G+    Q+ 
Sbjct: 289 VTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEVNTITFNVLIDGYAKAGQME 348

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN----VEEGLKLREVMLSQGFKLNVIAY 241
            A     ++   G  PD  T+ +L  G  + G     V +  +L E+  SQ   L+    
Sbjct: 349 NANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAALFVLDQQQLHEMFGSQ---LSTDGI 405

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            +L+  +C  GR+D+A  LL      G++  +  ++ LI    K+    +A +LY  M  
Sbjct: 406 DMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGFDEEAFELYKTMNK 465

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQDVVLYNIMIDGYVKLGNIG 360
             ++P+S     +++GLC +  + +AR++ + ++ M  C+  +  + I +D   + G++ 
Sbjct: 466 LGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRMGYCV--IASFTIYLDSSFRAGDVL 523

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A++ +  +    + P  V F++ + G C+   + +A      +   GL P+  TY + +
Sbjct: 524 GALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLI 583

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +A+C  GN+   L L Q+M    + P   T  ++I G C++  L  A  L   MY IG+T
Sbjct: 584 SAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGMYSIGLT 643

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +TYNT++ ++C+ KD+  A   +N+M     EP   TYNI +  LC N  L  A  L
Sbjct: 644 PDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYNIWMHSLCSNHLLNRAMML 703

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           L  L   + +   V Y T++   C++  + +AM    ++++  F+
Sbjct: 704 LDELAATDCAPNSVTYNTLMDGICSDV-LDRAMILTGRLIKLAFQ 747



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 236/484 (48%), Gaps = 6/484 (1%)

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G    A  +F  M   G  P+   +N +I GLC  G +  +      MGR  V PDA +Y
Sbjct: 205 GEVRAAWKVFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSY 264

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           +IL KG  L  Q   A+ +  ++ + G  P IVTY +L+   C+ G + E   L + ML 
Sbjct: 265 NILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQ 324

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
            G ++N I ++VL+    K+G+++ A     EM+A+GL PD  T++IL  G  K  K   
Sbjct: 325 AGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAAL 384

Query: 292 AI---QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
            +   Q  +EM   ++S +      ++  LC    + +A     S I       V  +N 
Sbjct: 385 FVLDQQQLHEMFGSQLSTDGI--DMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNA 442

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I  Y K G   EA +LY+ + +  ++PS  T N LI G C  G++  AR  L+ +   G
Sbjct: 443 LIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRMG 502

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
               A ++T ++++    G++   L    +M+   + P  V ++  + GLC+   L EA 
Sbjct: 503 YCVIA-SFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAY 561

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
               +M   G+ P+  TYN++I +FC+  ++ +A +L  +M    L P   T NILIDG 
Sbjct: 562 NGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGF 621

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C  G L  A+ L   +    ++   V Y T++ A+C   D++ AM F  +M+  G E  I
Sbjct: 622 CREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDI 681

Query: 589 RDYT 592
             Y 
Sbjct: 682 FTYN 685



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 146/569 (25%), Positives = 259/569 (45%), Gaps = 41/569 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVY 64
           R G V  A  V  +M     + ++  +N++++ L H  ++     L   +       +  
Sbjct: 203 RGGEVRAAWKVFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDAC 262

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           + +I++ G C   + +DA     E       P++V+ N +M+  C+ G    A+ LF  M
Sbjct: 263 SYNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEM 322

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L+ G+  +  ++N+LI G   AG ME A     +M   G+ PD  T++IL+ G +   + 
Sbjct: 323 LQAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGK- 381

Query: 185 SGAWKVIQKLL--IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +  + + Q+ L  + GS        +LIC  C  G +++  +L    + +G +++V  ++
Sbjct: 382 AALFVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFN 441

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA---------- 292
            L+++  K G  +EA  L   M  +GL P   T + LI GLC + ++ +A          
Sbjct: 442 ALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRM 501

Query: 293 ------------------------IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
                                   ++ +++M    + P+  A  A + GLC  + + EA 
Sbjct: 502 GYCVIASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAY 561

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             F  +I    + +   YN +I  + + GN+ EA++L +++ +  + P I T N LI GF
Sbjct: 562 NGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGF 621

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C+ G +  A  L   +   GL P  VTY T +NAYC   +I   +  + +M      P  
Sbjct: 622 CREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDI 681

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
            TY + +  LC    L  A+ LL+++      P+ +TYNT++   C    L +A  L  +
Sbjct: 682 FTYNIWMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDGICS-DVLDRAMILTGR 740

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           +     +P + T NIL    C NG  K A
Sbjct: 741 LIKLAFQPNTVTINILFSHFCKNGFGKRA 769



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 194/431 (45%), Gaps = 51/431 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           Y++ G + +A    A+MK + L     T+N L    Y      +   + D  ++ E    
Sbjct: 341 YAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAALF--VLDQQQLHE---- 394

Query: 63  VYTNSIVIDG-------LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
           ++ + +  DG       LC   RL DA   L     K    SV   NA+++ Y K GF E
Sbjct: 395 MFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGFDE 454

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE------------------------ 151
            A  L+  M K GL P + + N LI GLC  G +++                        
Sbjct: 455 EAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRMGYCVIASFTIYLD 514

Query: 152 ----------ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
                     AL+  +DM   G++PD + +S    G   L  +  A+    +++ +G  P
Sbjct: 515 SSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVP 574

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           +  TY  LI  +C+ GNV E LKL + M   G   ++   ++L+   C+ G ++ A  L 
Sbjct: 575 NNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLF 634

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
           + M ++GL PD+VTY+ ++   C+   ++ A+   N+M +    P+ F +   +  LC  
Sbjct: 635 FGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYNIWMHSLCSN 694

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
            ++  A M  D L  ++C  + V YN ++DG      +  A+ L  +LI+    P+ VT 
Sbjct: 695 HLLNRAMMLLDELAATDCAPNSVTYNTLMDGICS-DVLDRAMILTGRLIKLAFQPNTVTI 753

Query: 382 NSLIYGFCKNG 392
           N L   FCKNG
Sbjct: 754 NILFSHFCKNG 764



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 191/459 (41%), Gaps = 52/459 (11%)

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           A  + L +   +G  DEAL +L  +   G  P L   + L+R L +  +V  A +++ EM
Sbjct: 158 ARRLALHAFLAAGMADEALDVLARVRRAGDTPSLSALAALLRLLFRGGEVRAAWKVFEEM 217

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            ++   PN     A++ GLC + ++  +      +   + + D   YNI++ G+   G  
Sbjct: 218 AARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYNILMKGHCLYGQA 277

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A  L+ ++      P+IVT+N L+   C+ G++ +AR L D +   G+E + +T+   
Sbjct: 278 EDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEVNTITFNVL 337

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG---------------------- 457
           ++ Y + G ++       EM+   + P   T+ ++  G                      
Sbjct: 338 IDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAALFVLDQQQLHEMFG 397

Query: 458 --------------LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
                         LC   +L +A +LL      GV      +N +I ++ K     +AF
Sbjct: 398 SQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGFDEEAF 457

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           +L   M    L P+S+T N LI GLC  G L  A   L  +      +   ++T  + + 
Sbjct: 458 ELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRMGYCVI-ASFTIYLDSS 516

Query: 564 CAEGDVHKAMTFFCQMVEKGFE---------------ISIRDYTKSFFCMMLSNGFPPDQ 608
              GDV  A+  +  M   G +               +   D   + F  M+  G  P+ 
Sbjct: 517 FRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNN 576

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                ++ AF + G++    +L   M +SGL+PD F  N
Sbjct: 577 FTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRN 615



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 39/243 (16%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
            + R G V +A+ +  KM++  L                                P +++
Sbjct: 585 AFCRAGNVSEALKLEQKMRQSGL-------------------------------VP-DIF 612

Query: 65  TNSIVIDGLCQQSRLQDA--ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           T +I+IDG C++  L  A  + F   + G    P VV+ N +++ YC+      A     
Sbjct: 613 TRNILIDGFCREGGLNTANNLFFGMYSIG--LTPDVVTYNTMLNAYCRSKDINGAMIFMN 670

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML  G  PD F+YNI +H LC    +  A+   +++      P+++TY+ L  G  + S
Sbjct: 671 KMLADGCEPDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDG--ICS 728

Query: 183 QISGAWKVIQKLLIK-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +     ++   LIK    P+ VT  +L   +C+ G  +  L   E +    F  +    
Sbjct: 729 DVLDRAMILTGRLIKLAFQPNTVTINILFSHFCKNGFGKRALVWAEKLRDDSFNFDDATR 788

Query: 242 SVL 244
           ++L
Sbjct: 789 NIL 791


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 145/579 (25%), Positives = 278/579 (48%), Gaps = 19/579 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y RT  V  A  +  KM        + +Y +L+     T  + +  +     + P +++ 
Sbjct: 56  YCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQP-DMHM 114

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + ++ GLC+  R ++ +L L+      + PS  +  A++   C    A+ A+ +   M 
Sbjct: 115 YAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMF 174

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + GL P   +   +I+  C  G M +AL     M   G +P+  TY+ L +GF    ++ 
Sbjct: 175 EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH 234

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A  ++ K+ + G +PD VTY +LI G C  G++E   +L  +M   G   +   Y+ L+
Sbjct: 235 KAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 294

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           +++CK GR D+A  L   +E  G+KP+ VT++ LI GLCK  KV  A +   +M S   +
Sbjct: 295 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCT 354

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+++ + + +  LC+ +   E   +   ++  +     V Y I+I   +K  N G   + 
Sbjct: 355 PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVART 414

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           + +++    +P +VT+ + +  +C  G++ +A  +L  +  +G+    + Y T M+ +  
Sbjct: 415 WGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHAS 474

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G     +++L++M + A  P   TY ++++ L +       ++L+ED  V+ +TP  + 
Sbjct: 475 IGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVR-------MRLVED--VLPLTPAGVW 525

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
                    K  +L   F L + M  +   P S TY+ +++G   +G  + A  L+  ++
Sbjct: 526 ---------KAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK 576

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           E +ISL +  YT ++   C       A    C M++ GF
Sbjct: 577 EDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGF 615



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 235/463 (50%), Gaps = 14/463 (3%)

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +YN +I  LC    +  AL + + M R G  PDA T++ L  G+   +Q+  A  +  K+
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
            ++G   D+V+Y  LI G+C+ G ++E ++L   M      +    Y+ L+  +CK+GR 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHM----YAALVKGLCKAGRG 128

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           +E L +L  M+ +G +P    Y+ ++   C + K  +A ++  EM  K ++P      A+
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           +   C++  +++A    + + +  C  +V  YN ++ G+   G + +A+ L  ++    +
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
           +P  VT+N LI G C +G +  A RLL  ++  GL     TY   +NA C++G   +  +
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L   +ET+ I P  VT+  +I GLCK  K+  A + LE M   G TPD  TY++ I   C
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS-----LQEHNI 549
           K K  ++    + +M   +++P++  Y I+I  L     LK  +  LV+     +     
Sbjct: 369 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKL-----LKERNYGLVARTWGEMVSSGC 423

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +   V YTT ++A+C EG +++A     +M + G  +    Y 
Sbjct: 424 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYN 466



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 155/570 (27%), Positives = 263/570 (46%), Gaps = 7/570 (1%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + VI  LC+++ L  A+ +L       + P   + N+++  YC+    +VA+ LF  M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G   D  SY  LI G C  G ++EA+E   +M     +PD   Y+ L KG     + 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
                +++++   G  P    Y  ++   C     +E  ++ + M  +G    V+  + +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +++ CK GR+ +AL +L  M+  G KP++ TY+ L++G C + KVHKA+ L N+M    +
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +P++  +  ++ G C    I  A      +     I D   YN +I+   K G   +A  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+  L  + I P+ VTFNSLI G CK+GKV  A + L+ +   G  P   TY++F+   C
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +    Q  L+ + EM  K + P+ V YT+VI  L K+       +   +M   G  PD +
Sbjct: 369 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVV 428

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TY T +R++C    L +A  +L +M  + +   +  YN L+DG    G   +A  +L  +
Sbjct: 429 TYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQM 488

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
                   +  Y  +++       V   +      V K  E++        F +M  N F
Sbjct: 489 TSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTD---VFGLFDVMKKNEF 545

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
            P+      +L  F + G       L ++M
Sbjct: 546 LPNSGTYSSILEGFSEDGRTEEATSLVSLM 575



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 136/543 (25%), Positives = 253/543 (46%), Gaps = 7/543 (1%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           + NA++   C+      A     LM++ G  PDA+++N LI G C    ++ A +  + M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              G   D ++Y+ L +GF    +I  A ++  ++      PD+  Y  L+ G C+ G  
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM----DQPDMHMYAALVKGLCKAGRG 128

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           EEGL +   M   G++ +  AY+ ++   C   +  EA  +L EM   GL P +VT + +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I   CK+ ++  A+++   M  +   PN + + A++ G C +  + +A    + + +   
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             D V YN++I G    G+I  A +L R +    +     T+N+LI   CK+G+   A  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L D+++  G++P+AVT+ + +N  C+ G +      L++M +    P   TY+  I+ LC
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K    QE +  + +M    V P  + Y  +I    K ++     +   +M      P   
Sbjct: 369 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVV 428

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TY   +   C+ G L  A+ +L+ + ++ +++  +AY T++  H + G    A++   QM
Sbjct: 429 TYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQM 488

Query: 580 VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                  S+ +    F  +         +++  +      +  +L  VF L  VM K+  
Sbjct: 489 TSVA---SVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEF 545

Query: 640 LPD 642
           LP+
Sbjct: 546 LPN 548



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/609 (22%), Positives = 262/609 (43%), Gaps = 55/609 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           +  TG + +AV +  +M + D+ +       L    R  + +  L    ++   P +   
Sbjct: 91  FCETGRIDEAVELFGEMDQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRP-STRA 149

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + V+D  C + + ++A   LQE   K   P VV+  A+++ YCK G    A  +  LM 
Sbjct: 150 YAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 209

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G  P+ ++YN L+ G C  G + +A+   N M   GV PDA+TY++L +G  +   I 
Sbjct: 210 LRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIE 269

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A+++++ +   G   D  TY  LI   C+ G  ++   L + + ++G K N + ++ L+
Sbjct: 270 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 329

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           + +CKSG++D A   L +M + G  PD  TYS  I  LCK     + +    EM  K + 
Sbjct: 330 NGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVK 389

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY------------------- 346
           P++  +  ++  L ++         +  ++ S C  DVV Y                   
Sbjct: 390 PSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENV 449

Query: 347 ----------------NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY---- 386
                           N ++DG+  +G    AV + +Q+      P+  T+  L+     
Sbjct: 450 LMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVR 509

Query: 387 -------------GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
                        G  K  ++ D   L D +K +   P++ TY++ +  + E+G  +   
Sbjct: 510 MRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEAT 569

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           +L+  M+  +I      YT ++   CK  +  +A  L+  M   G  P  ++Y  ++   
Sbjct: 570 SLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGL 629

Query: 494 -CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            C+ +  +     +N  W  +  P    + ++IDGL   G    +  +++ L+  N   +
Sbjct: 630 ICEGQTDKAKEIFMNSRW-KDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPS 688

Query: 553 KVAYTTIIK 561
              Y  + +
Sbjct: 689 HQTYAMLTE 697



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/483 (23%), Positives = 214/483 (44%), Gaps = 40/483 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           +   G VH A+ ++ KM+   +     TYN L+       H +  + L   ++      +
Sbjct: 227 FCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIAD 286

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            YT + +I+ LC+  R   A         +   P+ V+ N++++  CK G  ++A     
Sbjct: 287 QYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLE 346

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL------AK 176
            M+  G  PD ++Y+  I  LC     +E L F  +M +  V+P  + Y+I+       +
Sbjct: 347 KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKER 406

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            + L+++  G      +++  G +PD+VTYT  +  YC  G + E   +   M   G  +
Sbjct: 407 NYGLVARTWG------EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 460

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD--------- 287
           + +AY+ L+      G+ D A+ +L +M +V   P+  TY IL+R L +           
Sbjct: 461 DTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLT 520

Query: 288 --KVHKAIQL------YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
              V KAI+L      ++ M      PNS  + +IL G  E     EA     SL+  + 
Sbjct: 521 PAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLV-SLMKEDS 579

Query: 340 IQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           I  +  +Y  ++  + K     +A  L   +I+    P ++++  L+ G    G+   A+
Sbjct: 580 ISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAK 639

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEG--NIQR-LLALLQEMETKAIGPTHVTYTVVI 455
            +    +     P  + +   ++   ++G  +I R ++ +L+ M  +   P+H TY ++ 
Sbjct: 640 EIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCR---PSHQTYAMLT 696

Query: 456 KGL 458
           + L
Sbjct: 697 EEL 699



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 129/302 (42%), Gaps = 24/302 (7%)

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN +I    +  ++  A++    ++     P   TFNSLI G+C+  +V  AR L D + 
Sbjct: 14  YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           L G     V+Y   +  +CE G I   + L  EM+     P    Y  ++KGLCK  + +
Sbjct: 74  LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGE 129

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           E + +L  M  +G  P    Y  ++   C  +  ++A ++L +M+   L P   T   +I
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 189

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           +  C  G + +A  +L  ++          Y  +++  C EG VHKAM    +M      
Sbjct: 190 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMR----- 244

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                      C     G  PD     +++      G + S F L  +M   GL+ D++ 
Sbjct: 245 ----------VC-----GVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 289

Query: 646 IN 647
            N
Sbjct: 290 YN 291


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 245/503 (48%), Gaps = 35/503 (6%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTN----DMGRHGVEPDAITYSILAKGFHLLSQISG 186
           P  + YN+L+   CI    E  +EF +    DM   G+ P   T+++L +     S +  
Sbjct: 110 PSVYLYNLLLES-CIK---ERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDA 165

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A ++  ++  KG  P+  T+ +L+ GYC+ G  ++GL+L   M S G   N + Y+ ++S
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI-- 304
           S C+ GR D++  ++ +M   GL PD+VT++  I  LCK+ KV  A +++++M       
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285

Query: 305 --SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              PNS  +  +L G C+  ++ +A+  F+S+  ++ +  +  YNI + G V+ G   EA
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             + +Q+ +K I PSI ++N L+ G CK G ++DA+ ++  +K +G+ P AVTY   ++ 
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHG 405

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           YC  G +    +LLQEM      P   T  +++  L K  ++ EA +LL  M   G   D
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLD 465

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLH-----------------------NLEPTSA 519
            +T N I+   C   +L KA +++  M +H                       N  P   
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TY+ L++GLC  G    A  L   +    +    VAY   I   C +G +  A      M
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585

Query: 580 VEKGFEISIRDYTKSFFCMMLSN 602
            +KG   S+  Y      + + N
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKN 608



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 158/583 (27%), Positives = 270/583 (46%), Gaps = 49/583 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + R G   D+  ++ KM+E  L   I T+NS                             
Sbjct: 227 FCREGRNDDSEKMVEKMREEGLVPDIVTFNSR---------------------------- 258

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEF----GPSVVSLNAIMSRYCKLGFAEVAKGLF 121
               I  LC++ ++ DA     +    E+     P+ ++ N ++  +CK+G  E AK LF
Sbjct: 259 ----ISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF 314

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             + +        SYNI + GL   G   EA      M   G+ P   +Y+IL  G   L
Sbjct: 315 ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKL 374

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +S A  ++  +   G  PD VTY  L+ GYC +G V+    L + M+      N    
Sbjct: 375 GMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTC 434

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++LL S+ K GRI EA  LL +M   G   D VT +I++ GLC   ++ KAI++   M  
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM-- 492

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
            R+      HG+  LG      I    +  DSLI +NC+ D++ Y+ +++G  K G   E
Sbjct: 493 -RV------HGSAALGNLGNSYIG---LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAE 542

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+ +++ +++ P  V +N  I+ FCK GK++ A R+L  ++  G   S  TY + + 
Sbjct: 543 AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLIL 602

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
               +  I  +  L+ EM+ K I P   TY   I+ LC+  K+++A  LL++M    + P
Sbjct: 603 GLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAP 662

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +  ++  +I +FCK  D   A ++  +  +         Y+++ + L   G L  A  LL
Sbjct: 663 NVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELL 721

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            ++ +    L    Y  ++++ C + ++  A     +M+++G+
Sbjct: 722 EAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY 764



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/604 (23%), Positives = 271/604 (44%), Gaps = 32/604 (5%)

Query: 5   VYSRTGMVHDAV--FVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSET 59
           +++++  +  A   F + + +  + K S+  YN LL +    R  + +  LY D+ +   
Sbjct: 84  IFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGI 143

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
               YT +++I  LC  S +  A     E   K   P+  +   ++  YCK G  +    
Sbjct: 144 APQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M  +G+ P+   YN ++   C  G  +++ +    M   G+ PD +T++       
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263

Query: 180 LLSQISGAWKVIQKLLIKG----SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
              ++  A ++   + +        P+ +TY +++ G+C++G +E+   L E +      
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            ++ +Y++ L  + + G+  EA  +L +M   G+ P + +Y+IL+ GLCK   +  A  +
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
              M    + P++  +G +L G C    +  A+     ++ +NC+ +    NI++    K
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE----- 410
           +G I EA +L R++ EK      VT N ++ G C +G++  A  ++  +++HG       
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503

Query: 411 ------------------PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
                             P  +TY+T +N  C+ G       L  EM  + + P  V Y 
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
           + I   CKQ K+  A ++L+DM   G      TYN++I        + +   L+++M   
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            + P   TYN  I  LC    +++A  LL  + + NI+    ++  +I+A C   D   A
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683

Query: 573 MTFF 576
              F
Sbjct: 684 QEVF 687



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/555 (24%), Positives = 252/555 (45%), Gaps = 27/555 (4%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           +  E   +VY  +++++   ++ R++      ++       P   + N ++   C     
Sbjct: 104 RFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCV 163

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           + A+ LF  M + G  P+ F++ IL+ G C AG  ++ LE  N M   GV P+ + Y+ +
Sbjct: 164 DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTI 223

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
              F    +   + K+++K+  +G  PDIVT+   I   C+ G V +  ++   M    +
Sbjct: 224 VSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283

Query: 235 ----KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
               + N I Y+++L   CK G +++A  L   +        L +Y+I ++GL +  K  
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFI 343

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A  +  +M  K I P+ +++  ++ GLC+  M+++A+     +  +    D V Y  ++
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            GY  +G +  A  L ++++     P+  T N L++   K G++++A  LL  +   G  
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEME---TKAIG--------------------PT 447
              VT    ++  C  G + + + +++ M    + A+G                    P 
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            +TY+ ++ GLCK  +  EA  L  +M    + PD + YN  I  FCK   +  AF++L 
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLK 583

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M       +  TYN LI GL +   +     L+  ++E  IS     Y T I+  C   
Sbjct: 584 DMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGE 643

Query: 568 DVHKAMTFFCQMVEK 582
            V  A     +M++K
Sbjct: 644 KVEDATNLLDEMMQK 658



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 138/549 (25%), Positives = 241/549 (43%), Gaps = 69/549 (12%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR-----HTDIMWD---LYDDIKVSET 59
           + G V DA  + + M ELD  + +   NS+ YNL         ++ D   L++ I+ ++ 
Sbjct: 264 KEGKVLDASRIFSDM-ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             ++ + +I + GL +  +  +A   L++   K  GPS+ S N +M   CKLG    AK 
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +  LM + G+ PDA +Y  L+HG C  G ++ A     +M R+   P+A T +IL     
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--- 236
            + +IS A ++++K+  KG   D VT  +++ G C  G +++ +++ + M   G      
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502

Query: 237 --------------------NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
                               ++I YS LL+ +CK+GR  EA  L  EM    L+PD V Y
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +I I   CKQ K+  A ++  +M  K    +   + +++LGL  K  I E     D +  
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE 622

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK------ 390
                ++  YN  I    +   + +A  L  ++++K I+P++ +F  LI  FCK      
Sbjct: 623 KGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDM 682

Query: 391 ----------------------------NGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
                                        G++  A  LL+ +   G E     Y   + +
Sbjct: 683 AQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVES 742

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE---DMYVIGV 479
            C++  ++    +L +M  +  G        VI GL K    +EA    +   +M  +G 
Sbjct: 743 LCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGE 802

Query: 480 TPDQITYNT 488
             +++  N 
Sbjct: 803 VANKVDPNA 811



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 202/481 (41%), Gaps = 77/481 (16%)

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           K +V  Y++LL S  K  R++    L  +M   G+ P   T+++LIR LC    V  A +
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L++EM  K   PN F  G ++ G C+  +  +     +++     + + V+YN ++  + 
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH---GL-E 410
           + G   ++ ++  ++ E+ + P IVTFNS I   CK GKV DA R+   ++L    GL  
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLAL----------------------------------- 435
           P+++TY   +  +C+ G ++    L                                   
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           L++M  K IGP+  +Y +++ GLCK   L +A  ++  M   GV PD +TY  ++  +C 
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              +  A  LL +M  +N  P + T NIL+  L   G +  A+ LL  + E    L  V 
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFE---------ISIRDYT-------------- 592
              I+   C  G++ KA+     M   G           I + D +              
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528

Query: 593 ---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
                          K+ F  M+     PD     + +  F + G + S F +   M K 
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588

Query: 638 G 638
           G
Sbjct: 589 G 589



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 180/408 (44%), Gaps = 28/408 (6%)

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ-LYNEMCSKRISPNSFAHGAILLGLCEK 321
           E   + L        IL+R      K+H+ IQ L+N + S  I     +    ++ +  K
Sbjct: 33  ESHGISLDATPTIARILVRA-----KMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAK 87

Query: 322 EMITEARMYFDSLIMSNCIQD---VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
               +       L+ S   ++   V LYN++++  +K   +     LY+ ++   I+P  
Sbjct: 88  SNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQT 147

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            TFN LI   C +  V  AR L D +   G +P+  T+   +  YC+ G   + L LL  
Sbjct: 148 YTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNA 207

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           ME+  + P  V Y  ++   C++ +  ++ +++E M   G+ PD +T+N+ I + CK   
Sbjct: 208 MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK 267

Query: 499 LRKAFQLLNQMWLHNL----EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           +  A ++ + M L        P S TYN+++ G C  G L++A  L  S++E++   +  
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQ 327

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMM 599
           +Y   ++     G   +A T   QM +KG   SI  Y                K+   +M
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             NG  PD      +L  +   G + +   L   M+++  LP+ +  N
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 151/603 (25%), Positives = 285/603 (47%), Gaps = 27/603 (4%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL D ++      +V T +++ID LC+ +R     L L++   +   P+  + N +++  
Sbjct: 31  DLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMRKRMIAPNEFTYNTLINGL 90

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
            K      A  +F  ML   L P+  +YNILI G C  G+ E+AL   + M   G+ PD 
Sbjct: 91  MKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDE 150

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           + Y  L  G   L++   A  +++++ + G       YT +I G C+ G ++E L+L ++
Sbjct: 151 VNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDM 210

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   G   ++I +SVL++  CK+G+I  A  ++ +M   GL P+ V Y+ LI   CK+  
Sbjct: 211 MFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGD 270

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + +A + Y  M       + F    ++  LC    + EA  +   +   +   + + ++ 
Sbjct: 271 ITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDC 330

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I+GY  LG+  +A  ++ ++I+    PS  T+ SL+ G CK G + +A++LL   KLH 
Sbjct: 331 IINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLL--YKLHH 388

Query: 409 LEPSAVT---YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           + P+AV    Y T ++  C+ G +   +AL  EM    + P   TY +++ GL ++ K+ 
Sbjct: 389 I-PAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMV 447

Query: 466 EAVQLLEDMYVIG-VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            A+   E     G ++P+++ Y ++     K      A  +  +M    + P +   N +
Sbjct: 448 PALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAV 507

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +DG    G ++  + L + +Q  +++ +   Y  ++  +  + D+ K             
Sbjct: 508 LDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKC------------ 555

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                     F+ +M   G  PD+  C  +++   + G L   F++   MI    L D+ 
Sbjct: 556 --------SKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQL 607

Query: 645 LIN 647
            +N
Sbjct: 608 TLN 610



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 156/570 (27%), Positives = 257/570 (45%), Gaps = 16/570 (2%)

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
           G  + P++V+ N I++  CK G  + A  L   M   G+  D  +YN+LI  LC      
Sbjct: 3   GSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSA 62

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           +       M +  + P+  TY+ L  G     +I GA +V  ++L+    P+ VTY +LI
Sbjct: 63  KGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILI 122

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G+C  GN E+ L+L +VM ++G + + + Y  LLS + K  + D A  L+  +   G+ 
Sbjct: 123 DGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMV 182

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
                Y+ +I GLCK   + +++QL + M     SP+      ++ G C+   I  A+  
Sbjct: 183 VGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEV 242

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
              +  +    + V+Y  +I    K G+I EA + Y  +            N LI   C+
Sbjct: 243 ICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCR 302

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G+VA+A   +  +    L P+++T+   +N Y   G+  +  ++  EM      P+H T
Sbjct: 303 AGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFT 362

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  ++KGLCK   L+EA +LL  ++ I    D   YNTI+   CK   L  A  L  +M 
Sbjct: 363 YGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMV 422

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLL-VSLQEHNISLTKVAYTTIIKAHCAEGDV 569
             N+ P S TY I++ GL   G +  A      +L    +S  KV YT++       G  
Sbjct: 423 QFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQS 482

Query: 570 HKAMTFFCQMVEKGFE---ISIR------------DYTKSFFCMMLSNGFPPDQEICEVM 614
           + A   + +M  KG     I+I             +  +  F  M S    P      ++
Sbjct: 483 NAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNIL 542

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           L  + +  DL    +   +M + G+ PDK 
Sbjct: 543 LHGYSKKKDLLKCSKFYNIMTRMGISPDKL 572



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 148/574 (25%), Positives = 263/574 (45%), Gaps = 4/574 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTN 66
           G    A+ ++  M+   L+     Y +LL  L      DI   L + I++S         
Sbjct: 129 GNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAY 188

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +IDGLC+   L +++  L         P +++ + +++ +CK G  + AK + C M K
Sbjct: 189 TAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFK 248

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL P+   Y  LI+  C  G + EA      M R G + D    ++L        +++ 
Sbjct: 249 AGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAE 308

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A   ++ +      P+ +T+  +I GY  +G+  +   + + M+  G   +   Y  LL 
Sbjct: 309 AEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLK 368

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CK G + EA  LLY++  +    D   Y+ ++   CK+ K+  A+ L+ EM    + P
Sbjct: 369 GLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLP 428

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQL 365
           +S  +  IL GL  K  +  A ++F+  +    +  + V+Y  + DG  K+G    A  +
Sbjct: 429 DSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYI 488

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           Y ++  K I+P  +  N+++ G+ + GK+    +L   ++   L PS  TY   ++ Y +
Sbjct: 489 YEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSK 548

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           + ++ +       M    I P  +T   +I GLCK   L    ++L+ M +     DQ+T
Sbjct: 549 KKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLT 608

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
            N +I + C+   + KAF LLN   L  + P   TYN +  GL     L+ +  LL  + 
Sbjct: 609 LNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDML 668

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           E  I+ T   Y ++I   C  GD+  A     +M
Sbjct: 669 ERGITPTSTQYISLINGMCRMGDIQGAFRLKDEM 702



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 154/617 (24%), Positives = 280/617 (45%), Gaps = 40/617 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN-LRHTDIMWDLYDDIKVSETPRNV- 63
           + + G + +A  VI KM +  L  +   Y +L+YN  +  DI     +   ++ T  +V 
Sbjct: 230 FCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVD 289

Query: 64  -YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +  +++I  LC+  R+ +A  F++  +  +  P+ ++ + I++ Y  LG A  A  +F 
Sbjct: 290 YFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFD 349

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+K G  P  F+Y  L+ GLC  G++ EA +    +       D   Y+ +        
Sbjct: 350 EMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRG 409

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG-FKLNVIAY 241
           ++S A  +  +++     PD  TY +++ G  + G +   L   E  L++G    N + Y
Sbjct: 410 KLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMY 469

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPD----------------------------- 272
           + L   + K G+ + A  +  EME  G+ PD                             
Sbjct: 470 TSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQS 529

Query: 273 ------LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
                 L TY+IL+ G  K+  + K  + YN M    ISP+     +I+LGLC+  M+  
Sbjct: 530 GSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDV 589

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
                  +IM + + D +  N++I    +   +G+A  L        I P + T+N++  
Sbjct: 590 GFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFT 649

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G  +   + ++  LL  +   G+ P++  Y + +N  C  G+IQ    L  EME   +  
Sbjct: 650 GLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSS 709

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             V  + +++GL +  K++EA+ +L+ M    + P   T+ T++   CK   L +A +L 
Sbjct: 710 WDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLR 769

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA-HCA 565
            +M L+ ++     YN+LI GLC +GD   A  L   ++E  +      Y T+I A    
Sbjct: 770 GKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTN 829

Query: 566 EGDVHKAMTFFCQMVEK 582
           EG+V + +  + +  EK
Sbjct: 830 EGEVEERLLVYLEQFEK 846



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 183/355 (51%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   G+   ++ Y+ +L+  CK GR   A  L+  ME+ G++ D+ TY++LI  LCK ++
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
             K   L  +M  + I+PN F +  ++ GL ++  I  A   F+ ++M N   + V YNI
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDG+   GN  +A++L   +  K + P  V + +L+ G  K  K   A+ L++ I++ G
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           +      YT  ++  C+ G +   L LL  M      P  +T++V+I G CK  K++ A 
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAK 240

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +++  M+  G+ P+ + Y T+I + CK  D+ +AF+    M     +      N+LI  L
Sbjct: 241 EVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSL 300

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           C  G +  A+  +  +   +++   + +  II  +   GD  KA + F +M++ G
Sbjct: 301 CRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLG 355


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 156/660 (23%), Positives = 300/660 (45%), Gaps = 21/660 (3%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
            + G +++A  ++  M++  +  ++ TYN+L+  L      D   DL+ +++        Y
Sbjct: 381  KAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAY 440

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T  ++ID   +      A+   ++   +   P++V+ NA +    ++G    AK +F  +
Sbjct: 441  TYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNEL 500

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
               GL PD+ +YN+++      G ++EA++  ++M +   EPD I  + L    +   ++
Sbjct: 501  KSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRV 560

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
              AW++  ++      P +VTY +L+ G  + G +++ ++L E M   G   N I ++ L
Sbjct: 561  EEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTL 620

Query: 245  LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
            L  +CK+  +D AL + Y+M  +  +PD++T++ +I G  KQ+++  AI L+++M  K +
Sbjct: 621  LDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLL 679

Query: 305  SPNSFAHGAILLGLCEKEMITEA-RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+      +L G+ +   I +A R+  D         D   +  ++ G +      +A+
Sbjct: 680  RPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAI 739

Query: 364  QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL-LDTIKLHGLEPSAVTYTTFMNA 422
                +L+ + I         +I   CK+ K + AR + +   K  G++P+   Y   ++ 
Sbjct: 740  LFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDG 799

Query: 423  YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            + E  N++    L +EM++    P   TY  +I    K  K+ E   L ++M   G  P+
Sbjct: 800  FLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPN 859

Query: 483  QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             ITYN +I +  K   L KA  L   +   +  PT  T+  LIDGL  +G L +A  +  
Sbjct: 860  TITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFD 919

Query: 543  SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------- 592
             +  +        Y  ++  +   G V  A  FF +MV++G    ++ YT          
Sbjct: 920  GMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAG 979

Query: 593  -----KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                   +F  +   G  PD     +M+    +         L   M   G++PD +  N
Sbjct: 980  RVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYN 1039



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/583 (25%), Positives = 280/583 (48%), Gaps = 5/583 (0%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKV-SIQTYNSLLYNLR---HTDIMWDLYDDIKV 56
           +L  ++S +  +H A+F    + EL   V + +T N +L  LR     + M  ++D ++ 
Sbjct: 94  VLGVLHSISDPIH-ALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQR 152

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
               RNV T  I+   L  +  L+ A   L++     F  +  S N ++    + GF + 
Sbjct: 153 QIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKE 212

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  ++  M+  GL P   +++ L+       +++  +    +M   G+ P+  TY+I  +
Sbjct: 213 ALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIR 272

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
                 +I  A+++++++   G  PD+VTYTVLI   C    +++ + L   M S   K 
Sbjct: 273 VLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKP 332

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + + Y  LL      G +D+   +  EMEA G  PD+VT++IL+  LCK  ++++A  L 
Sbjct: 333 DKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLL 392

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           + M  + + PN   +  ++ GL     + +A   F ++           Y ++ID + K 
Sbjct: 393 DTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKS 452

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G+ G+A++ + ++  + I+P+IV  N+ +Y   + G++ +A+ + + +K  GL P +VTY
Sbjct: 453 GHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTY 512

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              M  Y + G +   + LL EM      P  +    +I  L K  +++EA Q+   M  
Sbjct: 513 NMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEE 572

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
           + + P  +TYN ++    K   ++KA QL   M  H   P + T+N L+D LC N ++  
Sbjct: 573 MNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDL 632

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           A  +   +   N     + + TII     +  +  A+  F QM
Sbjct: 633 ALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM 675



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 160/685 (23%), Positives = 313/685 (45%), Gaps = 56/685 (8%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP---RNVYTNSIVIDGLC 74
           ++ +M+ + L+ +I TY   +  L     + + Y  +K  +      +V T +++ID LC
Sbjct: 251 LLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALC 310

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
              +L DA+    +       P  V+   ++ ++   G  +  + ++  M   G  PD  
Sbjct: 311 TARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVV 370

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           ++ IL++ LC AG + EA +  + M + GV P+  TY+ L  G    +++  A  +   +
Sbjct: 371 TFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNM 430

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
              G +P   TY +LI  + + G+  + L+  E M ++G   N++A +  L S+ + GR+
Sbjct: 431 ESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRL 490

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            EA  +  E+++ GL PD VTY+++++   K  +V +AI+L +EM   +  P+     ++
Sbjct: 491 GEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSL 550

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           +  L +   + EA   F  +   N    VV YNI++ G  K G I +AVQL+  +     
Sbjct: 551 IDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGC 610

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
           SP+ +TFN+L+   CKN +V  A ++   +      P  +T+ T ++ + ++  I+  + 
Sbjct: 611 SPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIW 670

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED-MYVIGVTPDQITYNTII--- 490
           L  +M+ K + P HVT   ++ G+ K  ++++A ++ ED  Y +G   D+  +  ++   
Sbjct: 671 LFHQMK-KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGI 729

Query: 491 --------------RSFCK--CKDLRKAFQLLNQMWLHN-----------------LEPT 517
                         R  C+  CKD      ++  +  H                  ++PT
Sbjct: 730 LTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPT 789

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
              YN+LIDG     +++ A  L   ++    +     Y ++I AH   G +++    + 
Sbjct: 790 LKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYD 849

Query: 578 QMVEKG-------FEISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           +M+ +G       + + I +  KS         +  ++S  F P       ++    + G
Sbjct: 850 EMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSG 909

Query: 623 DLGSVFELAAVMIKSGLLPDKFLIN 647
            L    E+   M+  G  P+  + N
Sbjct: 910 RLDDAHEMFDGMVHYGCRPNSAIYN 934



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 144/597 (24%), Positives = 266/597 (44%), Gaps = 78/597 (13%)

Query: 1    MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVS 57
            M+   YS+ G V +A+ ++++M ++  +  +   NSL   LY     +  W ++  ++  
Sbjct: 514  MMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEM 573

Query: 58   ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
                 V T +I++ GL ++ ++Q A+   +   G    P+ ++ N ++   CK    ++A
Sbjct: 574  NLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLA 633

Query: 118  KGLFCLMLKYGLHPDAFSYNI----------------------------------LIHGL 143
              +F  M      PD  ++N                                   L+ G+
Sbjct: 634  LKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGV 693

Query: 144  CIAGSMEEALEFTND-----------------MGRHGVEPDAITYSILAKGFHLL----- 181
              +G +E+A   T D                 MG  G+  +A T   +  G  L+     
Sbjct: 694  IKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMG--GILTEAGTEKAILFGERLVCRAIC 751

Query: 182  ----------------SQISGAWKVIQKLLIK-GSDPDIVTYTVLICGYCQIGNVEEGLK 224
                             + S A  V  K   + G  P +  Y +LI G+ ++ NVE    
Sbjct: 752  KDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWN 811

Query: 225  LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
            L E M S G   +   Y+ L+ +  KSG+I+E   L  EM   G KP+ +TY+++I  L 
Sbjct: 812  LFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLV 871

Query: 285  KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
            K +++ KA+ LY  + S   SP     G ++ GL +   + +A   FD ++   C  +  
Sbjct: 872  KSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSA 931

Query: 345  LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            +YNI+++GY KLG++  A + +++++++ I P + ++  L+   C  G+V DA    + +
Sbjct: 932  IYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKL 991

Query: 405  KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
            K  GL+P  V Y   +N        +  L+L  EM+ + I P   TY  +I  L     +
Sbjct: 992  KQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMI 1051

Query: 465  QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            +EA ++ E++  IG+ P+  TYN +IR +    +   A+ +  +M +   +P + T+
Sbjct: 1052 EEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 219/469 (46%), Gaps = 36/469 (7%)

Query: 151 EALEFTND-MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           E + F  D M R  +  +  TY I+ K   +   +  A   ++K+   G   +  +Y  L
Sbjct: 141 EDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGL 200

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I    Q G  +E L++   M+S+G K ++  +S L+ +  K   I   +GLL EME++GL
Sbjct: 201 IHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGL 260

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           +P++ TY+I IR L +  K+ +A ++   M      P+   +  ++  LC    + +A  
Sbjct: 261 RPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMC 320

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
            F  +  S+   D V Y  ++D +   G++ +  +++ ++     +P +VTF  L+   C
Sbjct: 321 LFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALC 380

Query: 390 KNGKVADARRLLDTIK-------LH----------------------------GLEPSAV 414
           K G++ +A  LLDT++       LH                            G+EP+A 
Sbjct: 381 KAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAY 440

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TY   ++ + + G+  + L   ++M+ + I P  V     +  L +  +L EA  +  ++
Sbjct: 441 TYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNEL 500

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+ PD +TYN +++ + K   + +A +LL++M     EP     N LID L   G +
Sbjct: 501 KSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRV 560

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           + A  +   ++E N++ T V Y  ++     EG + KA+  F  M   G
Sbjct: 561 EEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHG 609



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 163/318 (51%)

Query: 67   SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
            +++IDG  +   ++ A    +E       P   + N+++  + K G       L+  ML 
Sbjct: 794  NLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLT 853

Query: 127  YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             G  P+  +YN++I  L  +  +++A++   ++      P   T+  L  G     ++  
Sbjct: 854  RGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDD 913

Query: 187  AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
            A ++   ++  G  P+   Y +L+ GY ++G+V+   +  + M+ +G + ++ +Y++L+ 
Sbjct: 914  AHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVD 973

Query: 247  SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             +C +GR+D+AL    +++  GL PDLV Y+++I GL +  +  +A+ L++EM ++ I P
Sbjct: 974  ILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVP 1033

Query: 307  NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
            + + + +++L L    MI EA   ++ L       +V  YN +I GY   GN   A  +Y
Sbjct: 1034 DLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIY 1093

Query: 367  RQLIEKRISPSIVTFNSL 384
            ++++     P+  TF  L
Sbjct: 1094 KKMMVGGCDPNTGTFAQL 1111



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/444 (22%), Positives = 182/444 (40%), Gaps = 50/444 (11%)

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           VE+   + ++M  Q  + NV  Y ++  S+   G + +A   L +M   G   +  +Y+ 
Sbjct: 140 VEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNG 199

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           LI  L +     +A+++Y  M S+ + P+     A+++   ++                 
Sbjct: 200 LIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRR---------------- 243

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
                              NI   + L  ++    + P+I T+   I    ++GK+ +A 
Sbjct: 244 -------------------NIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAY 284

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           R++  +   G  P  VTYT  ++A C    +   + L  +M++ +  P  VTY  ++   
Sbjct: 285 RIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKF 344

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
                L +  ++  +M   G  PD +T+  ++ + CK   + +AF LL+ M    + P  
Sbjct: 345 SDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNL 404

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TYN LI GL     L +A  L  +++   +  T   Y  +I  H   G   KA+  F +
Sbjct: 405 HTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEK 464

Query: 579 MVEKGF---------------EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           M  +G                E+      K+ F  + S+G  PD     +M+  + + G 
Sbjct: 465 MKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQ 524

Query: 624 LGSVFELAAVMIKSGLLPDKFLIN 647
           +    +L + M K    PD  +IN
Sbjct: 525 VDEAIKLLSEMSKVQCEPDVIVIN 548



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 3/205 (1%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
            ++G + DA  +   M     + +   YN L+     L H D   + +  +       ++ 
Sbjct: 907  KSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLK 966

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            + +I++D LC   R+ DA+ + ++       P +V+ N +++   +    E A  LF  M
Sbjct: 967  SYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEM 1026

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
               G+ PD ++YN LI  L I G +EEA +   ++   G++P+  TY+ L +G+ L    
Sbjct: 1027 QNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNS 1086

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVL 209
              A+ + +K+++ G DP+  T+  L
Sbjct: 1087 ELAYGIYKKMMVGGCDPNTGTFAQL 1111


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 165/658 (25%), Positives = 284/658 (43%), Gaps = 45/658 (6%)

Query: 31  IQTYNSLLYNLRHTDIMWDLYDDIKV--SETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
           I   N L  +  H D  +  +  ++     TP  +    +++    QQ+R         +
Sbjct: 82  ISILNILSQSPHHLDFAFSHFKSLRTHFPSTPLPLQLYHLLLRSSLQQNRPHYVTSLYTD 141

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
                  P   + N ++   C+    + A+ LF  M + G  P+ F+  IL+ G C AG 
Sbjct: 142 MIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGR 201

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
            ++ALEF +  G+ G   + + Y+ L   F        A K+++++  KG  PD+VT+  
Sbjct: 202 TKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNS 259

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGF----KLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            I   C+ G V E  ++   M   G     K NV+ ++++L   C+ G ++EA  L+  M
Sbjct: 260 RISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETM 319

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           +  G    L +Y+  + GL +  K+ +   + +EM    I PN +++  ++ GLC   M+
Sbjct: 320 KKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMM 379

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            +AR   D ++ +    D V Y  ++ GY   G + EA  +  ++I K   P+  T N+L
Sbjct: 380 LDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTL 439

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           +    K G+ ++A  +L  +     +   VT    +N  C  G +++   ++ EM T   
Sbjct: 440 LNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGT 499

Query: 445 G----------------------PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
                                  P  +TYT +I GLCK  KL+EA +   +M    + PD
Sbjct: 500 NSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPD 559

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TY+T + +FCK   +  A ++L  M  +    T  TYN LI GL   G +     L+ 
Sbjct: 560 SVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMD 619

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG--------FEISIRDYTKS 594
            ++E  I      Y  +I   C  G    A +   +M++KG        F+I I+ + KS
Sbjct: 620 EMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKS 679

Query: 595 FFCMMLSNGFPPDQEIC-------EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
               +    F     +C        +M      GG L    EL    ++  LL   F+
Sbjct: 680 GDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFM 737



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 162/590 (27%), Positives = 286/590 (48%), Gaps = 30/590 (5%)

Query: 6   YSRTGMVHDAV-FVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR--- 61
           + R G    A+ FV  KM      V+   YN+L+ +    D M D  + +    T +   
Sbjct: 196 FCRAGRTKQALEFVDGKMGG---NVNRVVYNTLVSSFCKQD-MNDEAEKLVERMTEKGLL 251

Query: 62  -NVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEV 116
            +V T +  I  LC+  ++ +A  +F       E G   P+VV+ N ++  +C+ G  E 
Sbjct: 252 PDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEE 311

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A+ L   M K G      SYN  + GL   G + E     ++M  +G+EP+  +Y+I+  
Sbjct: 312 ARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMD 371

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G      +  A +++  ++  G  PD VTYT L+ GYC  G V E   +   M+ +G   
Sbjct: 372 GLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHP 431

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N    + LL+S+ K GR  EA  +L +M     + D VT +I++ GLC+  ++ KA ++ 
Sbjct: 432 NTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVV 491

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL-IMSNCIQDVVLYNIMIDGYVK 355
           +EM +     NS      + GL             +S+  +S  + DV+ Y  +I+G  K
Sbjct: 492 SEMWTD--GTNSLGKENPVAGL------------VNSIHNVSTNVPDVITYTTLINGLCK 537

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +G + EA + + +++ K + P  VT+++ +  FCK GK++ A R+L  ++ +G   +  T
Sbjct: 538 VGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQT 597

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y + +     +G I  +  L+ EM  + I P   TY  +I  LC+  K ++A  LL +M 
Sbjct: 598 YNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEML 657

Query: 476 VIG-VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
             G V+P+  ++  +I++FCK  D + A +L + + L       A Y+++ + L   G L
Sbjct: 658 DKGVVSPNVSSFKILIKAFCKSGDFKVACELFD-VALSVCGHKEALYSLMFNELLAGGKL 716

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            +A  L  +  E ++      Y  +I   C +G +  A     ++++KG+
Sbjct: 717 SDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGY 766



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/522 (24%), Positives = 217/522 (41%), Gaps = 89/522 (17%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + + GM+ +A  ++  MK+    VS+++YN+ L                           
Sbjct: 303 FCQEGMMEEARSLVETMKKGGNFVSLESYNTWLL-------------------------- 336

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
                 GL +  +L +    L E       P++ S N +M   C+      A+ L  LM+
Sbjct: 337 ------GLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMV 390

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G++PD  +Y  L+HG C  G + EA    N+M R G  P+  T + L        + S
Sbjct: 391 SNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKS 450

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--------- 236
            A +++QK+  K    D VT  +++ G C+ G +E+  ++   M + G            
Sbjct: 451 EAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAG 510

Query: 237 -------------NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
                        +VI Y+ L++ +CK G+++EA     EM A  L PD VTY   +   
Sbjct: 511 LVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNF 570

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CKQ K+  A+++  +M     S     + +++LGL  K  I E     D +       D+
Sbjct: 571 CKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDI 630

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI-SPSIVTFNSLIYGFCKNG---------- 392
             YN MI+   + G   +A  L  ++++K + SP++ +F  LI  FCK+G          
Sbjct: 631 CTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFD 690

Query: 393 ------------------------KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
                                   K++DA+ L +      L      Y   ++  C++G 
Sbjct: 691 VALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGR 750

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           +     LLQ++  K     H ++  VI GL K+   Q+A +L
Sbjct: 751 LDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADEL 792



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 29/308 (9%)

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             LY  +I+  ++P   TFN LI   C++  +  AR L D +   G +P+  T    +  
Sbjct: 136 TSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRG 195

Query: 423 YCEEGNIQRLLALLQEMETKAIGP-THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           +C  G  ++ L  +   + K  G    V Y  ++   CKQ    EA +L+E M   G+ P
Sbjct: 196 FCRAGRTKQALEFV---DGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLP 252

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN----LEPTSATYNILIDGLCVNGDLKNA 537
           D +T+N+ I + C+   + +A ++   M +       +P   T+N+++ G C  G ++ A
Sbjct: 253 DVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEA 312

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT----- 592
             L+ ++++    ++  +Y T +      G + +  +   +MVE G E +I  Y      
Sbjct: 313 RSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDG 372

Query: 593 ----------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV---MIKSGL 639
                     +    +M+SNG  PD      +L   H     G VFE  A+   MI+ G 
Sbjct: 373 LCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLL---HGYCSKGKVFEAKAILNEMIRKGC 429

Query: 640 LPDKFLIN 647
            P+ +  N
Sbjct: 430 HPNTYTCN 437



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 145/330 (43%), Gaps = 26/330 (7%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQE-------TAGKEFG---------------PSVV 99
           +  T +IV++GLC+   L+ A   + E       + GKE                 P V+
Sbjct: 467 DTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVI 526

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           +   +++  CK+G  E AK  F  M+   LHPD+ +Y+  +   C  G +  AL    DM
Sbjct: 527 TYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDM 586

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
            R+G      TY+ L  G     QI   + ++ ++  +G  PDI TY  +I   C+ G  
Sbjct: 587 ERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKT 646

Query: 220 EEGLKLREVMLSQGF-KLNVIAYSVLLSSMCKSGRIDEALGLL-YEMEAVGLKPDLVTYS 277
           ++   L   ML +G    NV ++ +L+ + CKSG    A  L    +   G K  L  YS
Sbjct: 647 KDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEAL--YS 704

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           ++   L    K+  A +L+     + +   +F +  ++  LC+   + +A      LI  
Sbjct: 705 LMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDK 764

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
               D   +  +IDG  K GN  +A +L R
Sbjct: 765 GYCFDHSSFIPVIDGLSKRGNKQQADELGR 794


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 161/582 (27%), Positives = 268/582 (46%), Gaps = 9/582 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
           R GM  DAV +  +M    +K   + Y    S L  LR  D    +   ++ +       
Sbjct: 197 RGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWEL 256

Query: 65  TNSIVIDGLCQQSRLQDAILFLQE---TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           T S V+D L +  R+ +A+    +     GK+    VV    +M  YC  G    A  LF
Sbjct: 257 TYSSVVDVLVKVRRMDEALRLKDQMLLATGKKM--DVVLATMLMHGYCLNGEVGKALDLF 314

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ++  G+ P   +Y +LI G    G  +E  +    M   G+ P    ++++ KG    
Sbjct: 315 DEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRD 374

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A  ++ KL++    PD+ TY  LI   C+   + E + L + M   G K +++ Y
Sbjct: 375 KRWKDAIGLL-KLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTY 433

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
             LL   C+ GR+DEAL L  EM   G  P+ VTY+ L++G  K+     A  L NEM  
Sbjct: 434 HSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQ 493

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +S   + +  ++ GL     + E        +    +   + YN +I+G+VK G +G 
Sbjct: 494 NGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGS 553

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  +YRQ+ +K I+P+IVT+ S I G+C+      A +LL  ++  G++P    Y  F++
Sbjct: 554 AFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFID 613

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C++GN+ R L  L  +    + P    Y   + G      + EA +    M    V  
Sbjct: 614 TFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVA 673

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D   Y T+I  F K  ++  A +L ++M  +++ P   T+  L  GLC +GD+  A  LL
Sbjct: 674 DTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLL 733

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             ++  ++S   V Y  +I A   +G + +A     +M+  G
Sbjct: 734 DDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSG 775



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/540 (27%), Positives = 260/540 (48%), Gaps = 19/540 (3%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSME-EALEFTNDMGRHGVEPDAITYSILAKGF 178
           LF  M   G + DA  Y+++I   C+ G M  +A+   ++M   GV+PD   Y+I   G 
Sbjct: 172 LFDEMRGKGCYADAKMYDVVIRA-CVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGL 230

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML-SQGFKLN 237
             L     A +V+ K+   G +P  +TY+ ++    ++  ++E L+L++ ML + G K++
Sbjct: 231 CKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMD 290

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V+  ++L+   C +G + +AL L  E+ + G+ P  VTY +LI+G   +    +  +L  
Sbjct: 291 VVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCR 350

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M  + + P+++    ++ GL   +   +A +    L++   + DV  Y  +I    K  
Sbjct: 351 QMIEQGLLPSTYEFNLVIKGLLRDKRWKDA-IGLLKLVVDTGVPDVFTYGCLIHWLCKHQ 409

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EAV L+ ++ E  + PSIVT++SL+ G+C+ G++ +A +L   +   G  P+ VTYT
Sbjct: 410 KLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYT 469

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T M  Y ++       ALL EM    +     TY ++I GL    ++ E  ++L+     
Sbjct: 470 TLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSE 529

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G  P  +TYN+II  F K   +  AF +  QM    + P   TY   IDG C       A
Sbjct: 530 GFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLA 589

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY------ 591
             LL+ ++   I     AY   I   C +G++ +A+ F   +++ G    +  Y      
Sbjct: 590 VKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTG 649

Query: 592 ---------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                       F+  M+      D EI   ++  F + G++    EL + M+ + ++PD
Sbjct: 650 YKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPD 709



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 203/395 (51%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+T   +I  LC+  +L +A+    +       PS+V+ ++++  YC+ G  + A  L+
Sbjct: 394 DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLY 453

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G  P+  +Y  L+ G     + + A    N+M ++GV     TY+IL  G +++
Sbjct: 454 SEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMV 513

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           +++    +++++ L +G  P  +TY  +I G+ + G +     +   M  +G   N++ Y
Sbjct: 514 NRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTY 573

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +  +   C++   D A+ LL  +   G++PD+  Y+  I   CKQ  + +A+     +  
Sbjct: 574 TSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLK 633

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             ++P+   + + + G    +M+ EA  ++ S+I    + D  +Y  +IDG+ K+GN+  
Sbjct: 634 DGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAF 693

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A++LY +++   + P   TF +L +G C++G +  A+RLLD ++   + P+ VTY   +N
Sbjct: 694 ALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLIN 753

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A   +G +Q    L  EM +  + P   TY ++ +
Sbjct: 754 ACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPR 788



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 210/431 (48%), Gaps = 1/431 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + Y  ++VI GL +  R +DAI  L+        P V +   ++   CK      A  L+
Sbjct: 360 STYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLW 418

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+ P   +Y+ L+ G C  G M+EAL+  ++M   G  P+ +TY+ L KG+   
Sbjct: 419 DKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKK 478

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
                A+ ++ ++   G      TY +LI G   +  V E  ++ +  LS+GF    + Y
Sbjct: 479 KAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTY 538

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +++   K+G +  A G+  +M   G+ P++VTY+  I G C+ +    A++L   +  
Sbjct: 539 NSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRR 598

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             I P+  A+ A +   C++  ++ A  +   L+      DV +YN  + GY  L  + E
Sbjct: 599 DGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAE 658

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A + Y  +I++R+      + +LI GF K G VA A  L   +  + + P   T+T   +
Sbjct: 659 ASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTH 718

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C  G+I     LL +M    + P  VTY ++I    +  KLQEA QL ++M   GV P
Sbjct: 719 GLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVP 778

Query: 482 DQITYNTIIRS 492
           D  TY+ + R+
Sbjct: 779 DDTTYDILPRT 789



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 225/508 (44%), Gaps = 54/508 (10%)

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            +++ +G  PD  + T L+       +  + L L + M  +G   +   Y V++ +  + 
Sbjct: 139 SRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRG 198

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G   +A+ L  EM   G+KPD   Y+I I GLCK     +A+Q+  +M      P    +
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLY---- 366
            +++  L +   + EA    D ++++   + DVVL  +++ GY   G +G+A+ L+    
Sbjct: 259 SSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVV 318

Query: 367 -------------------------------RQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                                          RQ+IE+ + PS   FN +I G  ++ +  
Sbjct: 319 SDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWK 378

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           DA  LL  +   G+ P   TY   ++  C+   +   + L  +M+   + P+ VTY  ++
Sbjct: 379 DAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G C++ ++ EA++L  +M   G  P+++TY T+++ + K K    A+ LLN+M  + + 
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVS 497

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
               TYNILI+GL +   +   D +L          T + Y +II      G +  A   
Sbjct: 498 CGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGM 557

Query: 576 FCQMVEKGFEISIRDYTKSF---FCM-------------MLSNGFPPDQEICEVMLIAFH 619
           + QM +KG   +I  YT SF   +C              +  +G  PD       +  F 
Sbjct: 558 YRQMRKKGITPNIVTYT-SFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFC 616

Query: 620 QGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           + G++        +++K GL PD  + N
Sbjct: 617 KQGNMSRALHFLVLLLKDGLTPDVTVYN 644



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 3/255 (1%)

Query: 30  SIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           +  TYNS++       +M   + +Y  ++      N+ T +  IDG C+ +    A+  L
Sbjct: 534 TTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLL 593

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
                    P + + NA +  +CK G    A     L+LK GL PD   YN  + G    
Sbjct: 594 IYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNL 653

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
             M EA +F   M +  V  D   Y+ L  GF  +  ++ A ++  +++     PD  T+
Sbjct: 654 KMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTF 713

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T L  G C+ G+++   +L + M       N++ Y++L+++  + G++ EA  L  EM +
Sbjct: 714 TALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLS 773

Query: 267 VGLKPDLVTYSILIR 281
            G+ PD  TY IL R
Sbjct: 774 SGVVPDDTTYDILPR 788



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 1/227 (0%)

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           Y +++ + + P   +   L+         ADA  L D ++  G    A  Y   + A   
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G     + L  EM    + P    Y + I GLCK      A+Q+L  M   G  P ++T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY-NILIDGLCVNGDLKNADCLLVSL 544
           Y++++    K + + +A +L +QM L   +        +L+ G C+NG++  A  L   +
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
               ++ T V Y  +IK   AEG   +      QM+E+G   S  ++
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEF 364


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/557 (25%), Positives = 262/557 (47%), Gaps = 36/557 (6%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T + VI G  ++ ++  A     E   + F P VV+ N+I++  CK    + A+ L 
Sbjct: 115 DVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLL 174

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G+ P+  +Y  +IHG    G  EEA +   +M   G+ PD ++++         
Sbjct: 175 RQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKH 234

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A ++   +  KG  P+IVTY +L+ GY   G   + +     M   G   N + +
Sbjct: 235 GRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVF 294

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++L+ +  K G +DEA+ +L EM+  GL PD+ TYS LI  LC+  ++  A+  +N+M  
Sbjct: 295 TILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIG 354

Query: 302 KRISPNSFAHGAILLGLC-------EKEMITEAR---------MYFDSLIMSNCIQ---- 341
             + PN+  + +++ G C        KE++ E            +F+S++ S C +    
Sbjct: 355 TGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVM 414

Query: 342 ----------------DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
                           D++++N +IDGY  +G +G+A  +   +I   I P   T+N+L+
Sbjct: 415 DAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLV 474

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G+ K+G++ D   L   +    ++P+ VTY   ++     G       +L EM      
Sbjct: 475 NGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTT 534

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
            +  TY +++KGLC+     EA+ + + +  + V  +  T NT+I S    +   +A  L
Sbjct: 535 VSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDL 594

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
            + +    L P ++TY I+I  L   G ++ AD +  S+++   +         I+    
Sbjct: 595 FSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLE 654

Query: 566 EGDVHKAMTFFCQMVEK 582
           +G++ KA  +  ++  K
Sbjct: 655 KGEIVKAGNYMSKVDGK 671



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 259/536 (48%), Gaps = 4/536 (0%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA-K 118
           P  ++T  +V++G C+  R +  + F              + N ++   C     + A K
Sbjct: 5   PPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVK 64

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR-HGV-EPDAITYSILAK 176
            L   M + G  PDAFSY I++  LC     ++AL+    M +  GV  PD +TY+ +  
Sbjct: 65  VLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIH 124

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           GF    +I  A  +  +++ +G  PD+VT+  +I   C+   V+    L   M+  G   
Sbjct: 125 GFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPP 184

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N + Y+ ++      GR +EA  +  EM   GL PD+V+++  +  LCK  +  +A +++
Sbjct: 185 NKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIF 244

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             M +K   PN   +G +L G   +    +   +F+++     + + +++ I+ID Y K 
Sbjct: 245 YSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKR 304

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G + EA+ +  ++  + +SP + T+++LI   C+ G++ADA    + +   G++P+ V Y
Sbjct: 305 GMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVY 364

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIG-PTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
            + +  +C  G++ +   L+ EM    I  P    +  ++  +CK+ ++ +A  + + + 
Sbjct: 365 HSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVK 424

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            IG   D I +NT+I  +C   ++ KAF +L+ M    + P + TYN L++G   +G + 
Sbjct: 425 DIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRID 484

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           +   L   + +  I  T V Y  I+      G    A     +M+  G  +S+  Y
Sbjct: 485 DGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTY 540



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 151/621 (24%), Positives = 282/621 (45%), Gaps = 32/621 (5%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSR 107
           L   +K  +T  N      V+  LC   R  DA+  L      E G  P   S   ++ R
Sbjct: 35  LRTGLKADKTAANT-----VLKCLCCTKRTDDAVKVLLRRM-TELGCVPDAFSYAIVLKR 88

Query: 108 YCKLGFAEVAKGLFCLMLKYG--LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE 165
            C    ++ A  L  +M K      PD  +YN +IHG    G + +A    ++M + G  
Sbjct: 89  LCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFV 148

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           PD +T++ +         +  A  ++++++  G  P+ VTYT +I GY  +G  EE  K+
Sbjct: 149 PDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKM 208

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
              M  +G   ++++++  + S+CK GR  EA  + Y M A G +P++VTY IL+ G   
Sbjct: 209 FREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYAT 268

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
           +      +  +N M    I  N      ++    ++ M+ EA +    +       DV  
Sbjct: 269 EGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFT 328

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y+ +I    ++G + +AV  + Q+I   + P+ V ++SLI GFC +G +  A+ L+  + 
Sbjct: 329 YSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMM 388

Query: 406 LHGL-EPSAVTYTTFMNAYCEEGNI---QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
            +G+  P+   + + +++ C+EG +     +  L++++  ++     + +  +I G C  
Sbjct: 389 NNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERS---DIIMFNTLIDGYCLV 445

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++ +A  +L+ M   G+ PD  TYNT++  + K   +     L  +M    ++PT+ TY
Sbjct: 446 GEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTY 505

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ--- 578
           NI++DGL   G    A  +L  +     +++   Y  I+K  C      +A+  F +   
Sbjct: 506 NIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCT 565

Query: 579 ------------MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
                       M+   + +  R+  K  F  +  +G  P+     +M+    + G +  
Sbjct: 566 MNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEE 625

Query: 627 VFELAAVMIKSGLLPDKFLIN 647
              + + M KSG  P   L+N
Sbjct: 626 ADNMFSSMEKSGCAPCSRLLN 646



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 134/521 (25%), Positives = 232/521 (44%), Gaps = 59/521 (11%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P  F+Y ++++G C A   E  L F   + R G++ D    + + K      +   A KV
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 191 IQKLLIK-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           + + + + G  PD                                     +Y+++L  +C
Sbjct: 66  LLRRMTELGCVPD-----------------------------------AFSYAIVLKRLC 90

Query: 250 KSGRIDEALGLLYEM--EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
              R  +AL LL  M  E     PD+VTY+ +I G  K+ K+ KA  LY+EM  +   P+
Sbjct: 91  DDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPD 150

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              H +I+  LC+   +  A +    ++ +    + V Y  MI GY  LG   EA +++R
Sbjct: 151 VVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFR 210

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++  + + P IV++NS +   CK+G+  +A  +  ++   G  P+ VTY   ++ Y  EG
Sbjct: 211 EMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEG 270

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
               +++    M+   I    + +T++I    K+  + EA+ +L +M   G++PD  TY+
Sbjct: 271 CFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYS 330

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           T+I + C+   L  A    NQM    ++P +  Y+ LI G C +GDL  A  L+  +  +
Sbjct: 331 TLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNN 390

Query: 548 NISLTKVA-YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPP 606
            I    +A + +I+ + C EG V  A   F             D  K         G   
Sbjct: 391 GIPRPNIAFFNSIVHSICKEGRVMDAHHIF-------------DLVKDI-------GERS 430

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           D  +   ++  +   G++G  F +   MI +G+ PD F  N
Sbjct: 431 DIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYN 471



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/536 (23%), Positives = 243/536 (45%), Gaps = 4/536 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + + G +  A  +  +M +      + T+NS++  L   R  D    L   +  +  P N
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +I G     R ++A    +E  G+   P +VS N+ M   CK G ++ A  +F 
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G  P+  +Y IL+HG    G   + + F N M   G+  + + ++IL   +    
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A  ++ ++  +G  PD+ TY+ LI   C++G + + +     M+  G + N + Y 
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGL-KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            L+   C  G + +A  L+YEM   G+ +P++  ++ ++  +CK+ +V  A  +++ +  
Sbjct: 366 SLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKD 425

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
                +      ++ G C    + +A    D++I +    D   YN +++GY K G I +
Sbjct: 426 IGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDD 485

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            + L+R++ +K+I P+ VT+N ++ G  + G+   A+++L  +   G   S  TY   + 
Sbjct: 486 GLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILK 545

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C        + + Q++ T  +     T   +I  +    + +EA  L   +   G+ P
Sbjct: 546 GLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVP 605

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           +  TY  +IR+  K   + +A  + + M      P S   N  I  L   G++  A
Sbjct: 606 NASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKA 661



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/479 (24%), Positives = 217/479 (45%), Gaps = 18/479 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDL---YDDIKVSETPRNVY 64
           + G   +A  +   M     + +I TY  LL+         D+   ++ +K      N  
Sbjct: 233 KHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCL 292

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             +I+ID   ++  + +A+L L E  G+   P V + + ++S  C++G    A   F  M
Sbjct: 293 VFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQM 352

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV-EPD-----AITYSILAKGF 178
           +  G+ P+   Y+ LI G C  G + +A E   +M  +G+  P+     +I +SI  +G 
Sbjct: 353 IGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEG- 411

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               ++  A  +   +   G   DI+ +  LI GYC +G + +   + + M+S G   + 
Sbjct: 412 ----RVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDT 467

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+ L++   KSGRID+ L L  EM    +KP  VTY+I++ GL +  +   A ++ +E
Sbjct: 468 FTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHE 527

Query: 299 M--CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           M  C   +S  ++    IL GLC      EA + F  L   N   ++   N MI+    +
Sbjct: 528 MIGCGTTVSLPTY--NIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTV 585

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
               EA  L+  + +  + P+  T+  +I    K G V +A  +  +++  G  P +   
Sbjct: 586 QRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLL 645

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
              +    E+G I +    + +++ K+I     T ++++     +   +E +QLL   Y
Sbjct: 646 NDTIRTLLEKGEIVKAGNYMSKVDGKSISLEASTSSLLLSLFSGKGNYREQIQLLPVKY 704


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 234/469 (49%), Gaps = 3/469 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKG 119
           ++ T + ++D   ++ R     + L+E   +  G  P+ V+ N +++   + G  E A  
Sbjct: 236 SIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAE 295

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   M +      +F+YN LI GL   G +++A +   +M   G+ P  +TY+ +  G  
Sbjct: 296 MVEGM-RLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLL 354

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              Q+  A     ++   G  PD++TY  L+ GYC+ G+++E L L   +   G    V+
Sbjct: 355 QSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVL 414

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y++L+   C+ G ++EA  L  EM   G  PD+ TY+IL++G      +  A + ++EM
Sbjct: 415 TYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEM 474

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            SK + P+ FA+   +        I +A    + +++     D V YNI+IDG  K GN+
Sbjct: 475 LSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNL 534

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A  L  +++   + P  +T+  LI+  C+ G + +AR+    +   GL PSAVTYT F
Sbjct: 535 NDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVF 594

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++AYC  GN+       ++M  + + P  +TY V+I  LC+  + Q A +   +M   G+
Sbjct: 595 IHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGL 654

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            P++ TY  +I   CK  +   A +   +M  + + P   T+  L  G 
Sbjct: 655 VPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 243/488 (49%), Gaps = 14/488 (2%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH--PDAFSYNILIHGLCIAGSMEEAL 153
           PS+V+ N ++  + K G  +    L   M   G    P+  ++N++I GL   G +EEA 
Sbjct: 235 PSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAA 294

Query: 154 EFTNDMGRHGVEPDAITYS-----ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           E    M R   +  + TY+     +LAKGF     +  A  +  ++  +G  P +VTY  
Sbjct: 295 EMVEGM-RLSKKASSFTYNPLITGLLAKGF-----VKKADDLQLEMENEGIMPTVVTYNA 348

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           +I G  Q G VE        M + G + +VI Y+ LL+  CK+G + EAL L  ++   G
Sbjct: 349 MIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAG 408

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           L P ++TY+ILI G C+   + +A +L  EM  +   P+   +  ++ G      +  AR
Sbjct: 409 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAR 468

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
            +FD ++      D   YN  I   + LG I +A +L   ++ + IS   VT+N LI G 
Sbjct: 469 EFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGL 528

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           CK G + DA+ L   +  +GL+P  +TYT  ++A+CE G ++      ++M +  + P+ 
Sbjct: 529 CKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSA 588

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VTYTV I   C++  L  A      M   GV P++ITYN +I + C+    + A++  ++
Sbjct: 589 VTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHE 648

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    L P   TY +LIDG C  G+ ++A      + ++ I    + +  + K    EG 
Sbjct: 649 MLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF-DEGH 707

Query: 569 VHKAMTFF 576
           ++ A+ + 
Sbjct: 708 MNHAIEYL 715



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 245/519 (47%), Gaps = 20/519 (3%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M  +G+ PD    N ++  L  A   ++      +M + G+EP  +TY+ L   F  
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 181 LSQISGAWKVIQKLLIKGSD--PDIVTYTVLICGYCQIGNVEEGLKLREVM-LSQGFKLN 237
             +      +++++  +GS   P+ VT+ V+I G  + G++EE  ++ E M LS+  K +
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK--KAS 307

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              Y+ L++ +   G + +A  L  EME  G+ P +VTY+ +I GL +  +V  A   + 
Sbjct: 308 SFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFV 367

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM +  + P+   + ++L G C+   + EA + F  L  +     V+ YNI+IDGY +LG
Sbjct: 368 EMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLG 427

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           ++ EA +L  +++E+   P + T+  L+ G      +A AR   D +   GL+P    Y 
Sbjct: 428 DLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYN 487

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T + A    G I +   L + M  + I    VTY ++I GLCK   L +A  L   M   
Sbjct: 488 TRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHN 547

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD ITY  +I + C+   LR+A +    M    L P++ TY + I   C  G+L +A
Sbjct: 548 GLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSA 607

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT----- 592
                 + E  +   ++ Y  +I A C  G    A   F +M+E+G   +   YT     
Sbjct: 608 YGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDG 667

Query: 593 ----------KSFFCMMLSNGFPPDQEICEVMLIAFHQG 621
                       F+  M  NG  PD    + +   F +G
Sbjct: 668 NCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEG 706



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 227/470 (48%), Gaps = 40/470 (8%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRNV 63
           +R G + +A  ++  M+ L  K S  TYN L+  L     +    DL  +++       V
Sbjct: 285 ARKGDLEEAAEMVEGMR-LSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTV 343

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +I GL Q  +++ A +   E       P V++ N++++ YCK G  + A  LF  
Sbjct: 344 VTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGD 403

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +   GL P   +YNILI G C  G +EEA     +M   G  PD  TY+IL KG H    
Sbjct: 404 LRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACS 463

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           ++ A +   ++L KG  PD   Y   I     +G + +  +LREVM+ +G   + + Y++
Sbjct: 464 LAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNI 523

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +CK+G +++A  L  +M   GL+PD +TY+ LI   C++  + +A + + +M S  
Sbjct: 524 LIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDG 583

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++P++                                   V Y + I  Y + GN+  A 
Sbjct: 584 LAPSA-----------------------------------VTYTVFIHAYCRRGNLYSAY 608

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
             +R+++E+ + P+ +T+N LI+  C+ G+   A R    +   GL P+  TYT  ++  
Sbjct: 609 GWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGN 668

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           C+EGN +  +    EM    I P ++T+  + KG   +  +  A++ LE+
Sbjct: 669 CKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF-DEGHMNHAIEYLEN 717



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 235/502 (46%), Gaps = 7/502 (1%)

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
             E A     P V   N ++         +    +   ML+ G+ P   +YN L+     
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 146 AGSMEEALEFTNDMGRHGVE--PDAITYSILAKGFHLLSQISGAWKVIQ--KLLIKGSDP 201
            G  ++      +M   G    P+ +T++++  G      +  A ++++  +L  K S  
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASS- 308

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
              TY  LI G    G V++   L+  M ++G    V+ Y+ ++  + +SG+++ A    
Sbjct: 309 --FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKF 366

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            EM A+GL+PD++TY+ L+ G CK   + +A+ L+ ++    ++P    +  ++ G C  
Sbjct: 367 VEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRL 426

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             + EAR   + ++   C+ DV  Y I++ G     ++  A + + +++ K + P    +
Sbjct: 427 GDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAY 486

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N+ I      G +A A RL + + L G+    VTY   ++  C+ GN+     L  +M  
Sbjct: 487 NTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVH 546

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
             + P  +TYT +I   C++  L+EA +  +DM   G+ P  +TY   I ++C+  +L  
Sbjct: 547 NGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYS 606

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A+    +M    +EP   TYN+LI  LC  G  + A      + E  +   K  YT +I 
Sbjct: 607 AYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLID 666

Query: 562 AHCAEGDVHKAMTFFCQMVEKG 583
            +C EG+   AM F+ +M + G
Sbjct: 667 GNCKEGNWEDAMRFYFEMHQNG 688



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 219/437 (50%), Gaps = 26/437 (5%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK--PDLVTYSILIRGLCKQ 286
           ML  G + +++ Y+ LL S  K GR D+   LL EME  G    P+ VT++++I GL ++
Sbjct: 228 MLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARK 287

Query: 287 DKVHKAIQLYNEM-CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
             + +A ++   M  SK+ S  SF +  ++ GL  K  + +A      +     +  VV 
Sbjct: 288 GDLEEAAEMVEGMRLSKKAS--SFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVT 345

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKR---ISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           YN MI G ++ G + EA Q+  + +E R   + P ++T+NSL+ G+CK G + +A  L  
Sbjct: 346 YNAMIHGLLQSGQV-EAAQV--KFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFG 402

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            ++  GL P+ +TY   ++ YC  G+++    L +EM  +   P   TYT+++KG     
Sbjct: 403 DLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNAC 462

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            L  A +  ++M   G+ PD   YNT IR+      + KAF+L   M L  +   + TYN
Sbjct: 463 SLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYN 522

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           ILIDGLC  G+L +A  L + +  + +    + YT +I AHC  G + +A  FF  M+  
Sbjct: 523 ILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISD 582

Query: 583 GFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           G   S   YT                 +F  ML  G  P++    V++ A  + G     
Sbjct: 583 GLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLA 642

Query: 628 FELAAVMIKSGLLPDKF 644
           +     M++ GL+P+K+
Sbjct: 643 YRHFHEMLERGLVPNKY 659



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 97/262 (37%), Gaps = 53/262 (20%)

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L+   EM +  + P       V++ L    +  +   +  +M  +G+ P  +TYNT++ S
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 493 FCK--------------------C-----------------KDLRKAFQLLNQMWLHNLE 515
           F K                    C                  DL +A +++  M L   +
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK-K 305

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
            +S TYN LI GL   G +K AD L + ++   I  T V Y  +I      G V  A   
Sbjct: 306 ASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVK 365

Query: 576 FCQMVEKGFEISI-------RDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQ 620
           F +M   G +  +         Y K+         F  +   G  P      +++  + +
Sbjct: 366 FVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCR 425

Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
            GDL     L   M++ G LPD
Sbjct: 426 LGDLEEARRLKEEMVEQGCLPD 447


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 213/449 (47%), Gaps = 24/449 (5%)

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  P ++T+  LI G C  G V E   L   M+ +G  ++V+ Y  +++ MCK G    A
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L LL +ME   +KPD+V YS +I  LCK      A  L++EM  K I+PN F +  ++ G
Sbjct: 65  LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
            C     ++A+     +I      DV+ +N +I   VK G + EA +L  +++ + I P 
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 184

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            VT+NS+IYGFCK+ +  DA+ + D +      P  VT+ T ++ YC    +   + LL+
Sbjct: 185 TVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLR 240

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           E+  + +     TY  +I G C+   L  A  L ++M   GV PD IT N ++  FC+ +
Sbjct: 241 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 300

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            L +A +L   + +  ++  +  YNI+I G+C    +  A  L  SL  H +      Y 
Sbjct: 301 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 360

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIA 617
            +I   C +  +  A   F +M +                    NG  PD      ++  
Sbjct: 361 VMISGFCGKSAISDANVLFHKMKD--------------------NGHEPDNSTYNTLIRG 400

Query: 618 FHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
             + G++    EL + M  +G   D F I
Sbjct: 401 CLKAGEIDKSIELISEMRSNGFSGDAFTI 429



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 220/427 (51%), Gaps = 4/427 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M++ GL P   ++N LI+GLC+ G + EA    N M   G+  D +TY  +  G   +  
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A  ++ K+      PD+V Y+ +I   C+ G+  +   L   ML +G   NV  Y+ 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++   C  GR  +A  LL +M    + PD++T++ LI    K+ K+ +A +L +EM  + 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I P++  + +++ G C+     +A+  FD  +M++   DVV +N +ID Y +   + E +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFD--LMAS--PDVVTFNTIIDVYCRAKRVDEGM 236

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           QL R++  + +  +  T+N+LI+GFC+   +  A+ L   +  HG+ P  +T    +  +
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           CE   ++  L L + ++   I    V Y ++I G+CK  K+ EA  L   + + GV PD 
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            TYN +I  FC    +  A  L ++M  +  EP ++TYN LI G    G++  +  L+  
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 416

Query: 544 LQEHNIS 550
           ++ +  S
Sbjct: 417 MRSNGFS 423



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 196/393 (49%), Gaps = 4/393 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T   +++G+C+    + A+  L +       P VV  +AI+ R CK G    A+ LF
Sbjct: 44  DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 103

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML+ G+ P+ F+YN +I G C  G   +A     DM    + PD +T++ L       
Sbjct: 104 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 163

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A K+  ++L +   PD VTY  +I G+C+    ++   + ++M S     +V+ +
Sbjct: 164 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTF 219

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++   C++ R+DE + LL E+   GL  +  TY+ LI G C+ D ++ A  L+ EM S
Sbjct: 220 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 279

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             + P++     +L G CE E + EA   F+ + MS    D V YNI+I G  K   + E
Sbjct: 280 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 339

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  L+  L    + P + T+N +I GFC    ++DA  L   +K +G EP   TY T + 
Sbjct: 340 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 399

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
              + G I + + L+ EM +        T  +V
Sbjct: 400 GCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 432



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 211/442 (47%), Gaps = 5/442 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V++ N +++  C  G    A  L   M+  GLH D  +Y  +++G+C  G  + AL  
Sbjct: 8   PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 67

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + M    ++PD + YS +          S A  +  ++L KG  P++ TY  +I G+C 
Sbjct: 68  LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 127

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G   +  +L   M+ +    +V+ ++ L+S+  K G++ EA  L  EM    + PD VT
Sbjct: 128 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 187

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ +I G CK ++   A  +++ M S    P+      I+   C  + + E       + 
Sbjct: 188 YNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREIS 243

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
               + +   YN +I G+ ++ N+  A  L++++I   + P  +T N L+YGFC+N K+ 
Sbjct: 244 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 303

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  L + I++  ++   V Y   ++  C+   +     L   +    + P   TY V+I
Sbjct: 304 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 363

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G C +  + +A  L   M   G  PD  TYNT+IR   K  ++ K+ +L+++M  +   
Sbjct: 364 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 423

Query: 516 PTSATYNILIDGLCVNGDLKNA 537
             + T  ++ D L  +G L  +
Sbjct: 424 GDAFTIKMVAD-LITDGRLDKS 444



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 219/432 (50%), Gaps = 5/432 (1%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +++  TP  V T + +I+GLC + R+ +A   + +  GK     VV+   I++  CK+G 
Sbjct: 2   VEIGLTPV-VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            + A  L   M +  + PD   Y+ +I  LC  G   +A    ++M   G+ P+  TY+ 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +  GF    + S A ++++ ++ +  +PD++T+  LI    + G + E  KL + ML + 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              + + Y+ ++   CK  R D+A  +   M +    PD+VT++ +I   C+  +V + +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 236

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           QL  E+  + +  N+  +  ++ G CE + +  A+  F  +I      D +  NI++ G+
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            +   + EA++L+  +   +I    V +N +I+G CK  KV +A  L  ++ +HG+EP  
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            TY   ++ +C +  I     L  +M+     P + TY  +I+G  K  ++ ++++L+ +
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 416

Query: 474 MYVIGVTPDQIT 485
           M   G + D  T
Sbjct: 417 MRSNGFSGDAFT 428



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 150/344 (43%), Gaps = 24/344 (6%)

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++P       ++ GLC +  + EA    + ++      DVV Y  +++G  K+G+   A+
Sbjct: 6   LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 65

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L  ++ E  I P +V ++++I   CK+G  +DA+ L   +   G+ P+  TY   ++ +
Sbjct: 66  NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 125

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C  G       LL++M  + I P  +T+  +I    K+ KL EA +L ++M    + PD 
Sbjct: 126 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 185

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TYN++I  FCK      A  + + M      P   T+N +ID  C    +     LL  
Sbjct: 186 VTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 241

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           +    +      Y T+I   C   +++ A   F +M+                    S+G
Sbjct: 242 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI--------------------SHG 281

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             PD   C ++L  F +   L    EL  V+  S +  D    N
Sbjct: 282 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 325



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 127/267 (47%), Gaps = 49/267 (18%)

Query: 33  TYNSLLYNL-RHTDIMWDLYDDIK----VSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           TYNS++Y   +H     + +DD K    +  +P +V T + +ID  C+  R+ + +  L+
Sbjct: 187 TYNSMIYGFCKH-----NRFDDAKHMFDLMASP-DVVTFNTIIDVYCRAKRVDEGMQLLR 240

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFS------------ 135
           E + +    +  + N ++  +C++     A+ LF  M+ +G+ PD  +            
Sbjct: 241 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 300

Query: 136 -----------------------YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
                                  YNI+IHG+C    ++EA +    +  HGVEPD  TY+
Sbjct: 301 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 360

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
           ++  GF   S IS A  +  K+   G +PD  TY  LI G  + G +++ ++L   M S 
Sbjct: 361 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 420

Query: 233 GFKLNVIAYSV-LLSSMCKSGRIDEAL 258
           GF  +  A+++ +++ +   GR+D++ 
Sbjct: 421 GFSGD--AFTIKMVADLITDGRLDKSF 445



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 3/204 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPR 61
           VY R   V + + ++ ++    L  +  TYN+L++     D +    DL+ ++       
Sbjct: 225 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 284

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +  T +I++ G C+  +L++A+   +     +     V+ N I+   CK    + A  LF
Sbjct: 285 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 344

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
           C +  +G+ PD  +YN++I G C   ++ +A    + M  +G EPD  TY+ L +G    
Sbjct: 345 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 404

Query: 182 SQISGAWKVIQKLLIKGSDPDIVT 205
            +I  + ++I ++   G   D  T
Sbjct: 405 GEIDKSIELISEMRSNGFSGDAFT 428


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 151/585 (25%), Positives = 266/585 (45%), Gaps = 27/585 (4%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           E   ++Y  ++++    +++R++      ++       P   + N ++   C  G  E A
Sbjct: 107 EKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDA 166

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + LF  M   G  P+ F++ IL+ G C AG   + LE    M   G+ P+ + Y+ L   
Sbjct: 167 RELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISS 226

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQGFKL 236
           F    +   A K++ K+   G  P + T+   I   C  G + E  ++ R++ + +   L
Sbjct: 227 FCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGL 286

Query: 237 ---NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              NVI Y ++L   CK G ++EA  L+  M+      +L +Y+I + GL +  K+ +A 
Sbjct: 287 PHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAW 346

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            +  EM    I P+ +++  ++ GLC+  M+++ARM    +I +  + D V Y+ ++ GY
Sbjct: 347 IVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGY 406

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
              G + EA  L  ++I    SP+  T N L++   K G++++A  LL  +   G     
Sbjct: 407 CSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDT 466

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMET-----------------------KAIGPTHVT 450
           VT    +NA C  G + + + ++  M T                       K   P  VT
Sbjct: 467 VTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVT 526

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y+ +I GLCK  +L +A +   +M   G+ PD   Y+T I SFC+   +  AFQ+L  M 
Sbjct: 527 YSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDME 586

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
                 T  TYN LI GL     +     L+  ++E  +S     Y  ++   C  G ++
Sbjct: 587 KRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRIN 646

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
            A +   +M++KG   +I  +         +  F    E+ E+ L
Sbjct: 647 DAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIAL 691



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/555 (26%), Positives = 254/555 (45%), Gaps = 42/555 (7%)

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P  + YN+L+        +E       DM    V P+A T+++L         +  A +
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           +  K+  +G +P+  T+ +L+ GYC+ G   +GL+L   M + G   N + Y+ L+SS C
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR----IS 305
           K G+  +A  L+ +M   GL P + T++  I  LC   K+ +A +++ +M          
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH 288

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN   +  +L+G C++ M+ EA+   D++  +    ++  YNI + G ++ G + EA  +
Sbjct: 289 PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIV 348

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
            ++++   I P I ++N ++ G CKNG ++DAR L+  +  +G+ P  VTY+T ++ YC 
Sbjct: 349 LKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCS 408

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +G +     LL EM +    P   T  V++  L K+ ++ EA  LL+ M   G   D +T
Sbjct: 409 KGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVT 468

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLH------NL-----------------EPTSATYN 522
            N II + C    L KA +++N MW H      NL                  P   TY+
Sbjct: 469 CNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYS 528

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            +I GLC  G L +A    + +    +      Y T I + C EG +  A      M ++
Sbjct: 529 TIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKR 588

Query: 583 GFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           G   +++ Y      +               M   G  PD      ML    +GG +   
Sbjct: 589 GCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDA 648

Query: 628 FELAAVMIKSGLLPD 642
             +   M++ G+ P+
Sbjct: 649 PSVLDEMLQKGISPN 663



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 173/703 (24%), Positives = 313/703 (44%), Gaps = 81/703 (11%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKE--LDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIK 55
           L  V +++G  + A+     ++    + + SI  YN LL +     R   + W LY D+ 
Sbjct: 81  LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSW-LYKDMV 139

Query: 56  VSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
           ++      YT +++I  LC    L+DA     +   +   P+  +   ++  YC+ G A 
Sbjct: 140 LARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLAS 199

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
               L   M   G+ P+   YN LI   C  G   +A +  + M   G+ P   T++   
Sbjct: 200 KGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRI 259

Query: 176 KGFHLLSQISGAWKVIQKLLIKGS----DPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
                  +I  A ++ + + I        P+++TY +++ G+C+ G +EE   L + M  
Sbjct: 260 SALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKR 319

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
               +N+ +Y++ L  + ++G++ EA  +L EM  +G++PD+ +Y+I++ GLCK   +  
Sbjct: 320 NANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSD 379

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ---------- 341
           A  L   M    I P++  +  +L G C K  + EA      +I +NC            
Sbjct: 380 ARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLH 439

Query: 342 -------------------------DVVLYNIMID---------------------GYVK 355
                                    D V  NI+I+                     G   
Sbjct: 440 SLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAA 499

Query: 356 LGNIGEA-VQLYRQLIE-KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           LGN+G + + L    I  K+ +P +VT++++I G CK G++ DA++    +   GL+P +
Sbjct: 500 LGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDS 559

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
             Y TF++++C EG I     +L++ME +    T  TY  +I GL  + ++ E   L+++
Sbjct: 560 AIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDE 619

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   GV+PD  TYN ++   C+   +  A  +L++M    + P  +++ ILI   C   D
Sbjct: 620 MREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACD 679

Query: 534 LKNA-DCLLVSLQEHNISLTKVA-YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
            K + +   ++L   N+   K A YT +       G V +A   F   +++ F+I     
Sbjct: 680 FKASHEVFEIAL---NVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIG---- 732

Query: 592 TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
             +F    L +    D+++ E      H+  D G  F+ A+ M
Sbjct: 733 --NFLYKDLIDRLCKDEKL-EAASDVLHRLIDKGYQFDPASFM 772



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 157/621 (25%), Positives = 280/621 (45%), Gaps = 53/621 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y R G+    + ++ +M+ + +  +   YN+L+ +        D   L D ++      +
Sbjct: 192 YCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPH 251

Query: 63  VYTNSIVIDGLCQQSR-LQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAK 118
           V T +  I  LC   + L+ + +F      +E G   P+V++   ++  +CK G  E AK
Sbjct: 252 VETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAK 311

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M +     +  SYNI + GL   G + EA     +M   G+EPD  +Y+I+  G 
Sbjct: 312 TLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGL 371

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +S A  ++  ++  G  PD VTY+ L+ GYC  G V E   L   M+S     N 
Sbjct: 372 CKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNT 431

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
              +VLL S+ K GRI EA  LL +M   G   D VT +I+I  LC   ++ KAI++ N 
Sbjct: 432 YTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNG 491

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M         + HG+  LG      I    +  D++    C  D+V Y+ +I G  K G 
Sbjct: 492 M---------WTHGSAALGNLGNSFIG---LVDDTISGKKCTPDLVTYSTIISGLCKAGR 539

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + +A + + +++ K + P    +++ I+ FC+ GK++ A ++L  ++  G   +  TY +
Sbjct: 540 LDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNS 599

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +     +  I  L  L+ EM  K + P   TY  ++  LC+  ++ +A  +L++M   G
Sbjct: 600 LILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKG 659

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQ------------------LLNQMWL--------- 511
           ++P+  ++  +I++FCK  D + + +                  + N++ +         
Sbjct: 660 ISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKE 719

Query: 512 -------HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
                   + +  +  Y  LID LC +  L+ A  +L  L +        ++  +I    
Sbjct: 720 LFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFG 779

Query: 565 AEGDVHKAMTFFCQMVEKGFE 585
             G+ H A     +M+E   E
Sbjct: 780 KMGNKHVADELAERMMEMASE 800



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 196/401 (48%), Gaps = 26/401 (6%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEA--VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           L++ + KSG  ++A+     + +     +P +  Y++L++   ++++V     LY +M  
Sbjct: 81  LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVL 140

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
            R+SP ++    ++  LC+   + +AR  FD +    C  +   + I++ GY + G   +
Sbjct: 141 ARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASK 200

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            ++L  Q+    I P+ V +N+LI  FCK GK  DA +L+D ++  GL P   T+ + ++
Sbjct: 201 GLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRIS 260

Query: 422 AYCEEGNIQRLLALLQEME-TKAIG---PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           A C  G I     + ++M+  + +G   P  +TY +++ G CK+  L+EA  L++ M   
Sbjct: 261 ALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRN 320

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
               +  +YN  +    +   L +A+ +L +M    +EP   +YNI++DGLC NG L +A
Sbjct: 321 ANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDA 380

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             L+  +  + I    V Y+T++  +C++G V +A     +M+                 
Sbjct: 381 RMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMI----------------- 423

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
              SN   P+   C V+L +  + G +     L   M + G
Sbjct: 424 ---SNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKG 461



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 140/324 (43%), Gaps = 19/324 (5%)

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           + LYN+++   ++   +     LY+ ++  R+SP   TFN LI   C +G + DAR L D
Sbjct: 112 IYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFD 171

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G EP+  T+   +  YC  G   + L LL +M T  I P +V Y  +I   CK+ 
Sbjct: 172 KMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEG 231

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN----LEPTS 518
           K  +A +L++ M   G+ P   T+N+ I + C    + +A ++   M +        P  
Sbjct: 232 KTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNV 291

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TY +++ G C  G L+ A  L+ +++ +   +   +Y   +      G + +A     +
Sbjct: 292 ITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKE 351

Query: 579 MVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           M+  G E  I  Y                +    +M+ NG  PD      +L  +   G 
Sbjct: 352 MLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGK 411

Query: 624 LGSVFELAAVMIKSGLLPDKFLIN 647
           +     L   MI +   P+ +  N
Sbjct: 412 VFEANNLLHEMISNNCSPNTYTCN 435


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 153/597 (25%), Positives = 282/597 (47%), Gaps = 26/597 (4%)

Query: 73  LCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY-GL 129
           LC   R  +A+  L      E G  P   S N ++   C    ++ A  +   M K  G 
Sbjct: 210 LCYAKRTDEALSMLLHRM-SELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGC 268

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            PD  SY ++IHGL + G + +A    N+M + GV P+ +TY+ +         +  A  
Sbjct: 269 SPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAEL 328

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           V++++      PD VTYT +I GY  +G  +E  K+ + M  +G   +++ ++ L+ S+C
Sbjct: 329 VLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLC 388

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K  R  EA  + + +   G KPD+++YSIL+ G   + +      L++ M    I  +S 
Sbjct: 389 KHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSH 448

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
               ++    ++ M+ EA + F  +       +VV Y  +I    ++G + +A++   Q+
Sbjct: 449 CFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQM 508

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL-EPSAVTYTTFMNAYCEEG- 427
           I   + P+ V ++SLI GFC +G +  A+ L+  +   G+  P+   +++ +++ C EG 
Sbjct: 509 ISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGR 568

Query: 428 --NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
             N Q +  L+  +  +   P   T+  +I G C   K+ +A  +L+ M   G  PD +T
Sbjct: 569 VMNAQDVFNLVIHIGDR---PDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVT 625

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           Y+T+I  + K   +     L  +M    ++PT+ TY++++DGL   G    A  +   + 
Sbjct: 626 YSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMI 685

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM--VEKGFEISI-------------RD 590
           E   +++   YT I++  C      +A+T F ++  +   FEI+I             R+
Sbjct: 686 ESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRRE 745

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                F  + ++G  P+     VM+I   + G +     + + M K+G  P   L+N
Sbjct: 746 EAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLN 802



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 153/577 (26%), Positives = 270/577 (46%), Gaps = 5/577 (0%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGL 73
           ++ +M EL       +YN+++ +L    R  + +  L    K      +V + ++VI GL
Sbjct: 223 LLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGL 282

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
             +  +  A     E   K   P+VV+ N+I+   CK    + A+ +   M    + PD 
Sbjct: 283 FMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDE 342

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
            +Y  +IHG    G  +EA +   +M R G+ PD +T++ L        +   A ++   
Sbjct: 343 VTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHS 402

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +  KG  PDI++Y++L+ GY   G   +   L   M   G   +   +++L+++  K G 
Sbjct: 403 IATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGM 462

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +DEAL +  EM   G+ P++VTY+ +I  LC+  ++  A++  ++M S  + PN+  + +
Sbjct: 463 MDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHS 522

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           ++ G C    + +A+     ++     + ++  ++ +I      G +  A  ++  +I  
Sbjct: 523 LIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHI 582

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P I TFNSLI G+C  GK+  A  +LD +   G EP  VTY+T +N Y + G I   
Sbjct: 583 GDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDG 642

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L L +EM  K + PT VTY++V+ GL +  +   A ++  +M   G      TY  I++ 
Sbjct: 643 LILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQG 702

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            C+     +A  L +++   NL+   A  N +I  L      + A  L  S+    +   
Sbjct: 703 LCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPN 762

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
              Y  +I     EG V +A   F  M + G   S R
Sbjct: 763 ASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSR 799



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/555 (25%), Positives = 269/555 (48%), Gaps = 3/555 (0%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +L++++       NV T + ++  LC+   +  A L L++       P  V+  A++  Y
Sbjct: 293 NLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGY 352

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
             LG  + A  +F  M + GL PD  ++N L+  LC     +EA E  + +   G +PD 
Sbjct: 353 SCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDI 412

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           I+YSIL  G+    +      +   +   G   D   + +LI  + + G ++E L +   
Sbjct: 413 ISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTE 472

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M  QG   NV+ Y+ +++++C+ GR+ +A+  L +M ++GLKP+ V Y  LI+G C    
Sbjct: 473 MRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGD 532

Query: 289 VHKAIQLYNEMCSKRIS-PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           + KA +L +EM  + I  PN     +I+  LC +  +  A+  F+ +I      D+  +N
Sbjct: 533 LIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFN 592

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +IDGY  +G + +A  +   ++     P +VT+++LI G+ K+G++ D   L   +   
Sbjct: 593 SLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCK 652

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
            ++P+ VTY+  ++     G       +  EM       +  TYT++++GLC+     EA
Sbjct: 653 RVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEA 712

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           + L   +  + +  +    NT+I +  K K   +A  L   +    L P ++TY ++I  
Sbjct: 713 ITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIIN 772

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           L   G ++ AD +  S+++   + +      II+    +G++ KA  +  ++   G  IS
Sbjct: 773 LLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKV--DGTIIS 830

Query: 588 IRDYTKSFFCMMLSN 602
           +   T S    + ++
Sbjct: 831 LEASTTSLLISLFAS 845



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 157/642 (24%), Positives = 292/642 (45%), Gaps = 65/642 (10%)

Query: 44  TDIMWDLYDDIKVSETPRNVYTNSIVIDG-LCQQSRLQD----------AILFLQETAGK 92
           T+    L+D++   +TP     +   ++G L   +R +D          A+        +
Sbjct: 99  TEDAHHLFDELLRQDTP----VHGRALNGFLAALARARDSVACSDAPALAVALFNRICRE 154

Query: 93  EFGPSVVSLNA-----IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           E GP VV L       +M   C+    ++    F  +L+ GL  D    N  +  LC A 
Sbjct: 155 EAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAK 214

Query: 148 SMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI-KGSDPDIVT 205
             +EAL    + M   G  PDA +Y+ + K     S+   A  ++ ++    G  PD+V+
Sbjct: 215 RTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVS 274

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS-------------- 251
           YT++I G    G + +   L   M+ +G   NV+ Y+ ++ ++CK+              
Sbjct: 275 YTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMF 334

Query: 252 ---------------------GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
                                GR  EA  +  EM   GL PD+VT++ L+  LCK  +  
Sbjct: 335 DNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSK 394

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A ++++ + +K   P+  ++  +L G   +    +    F S+  +  + D   +NI+I
Sbjct: 395 EAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILI 454

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           + + K G + EA+ ++ ++  + +SP++VT+ ++I   C+ G++ADA   L  +   GL+
Sbjct: 455 NAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLK 514

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT-YTVVIKGLCKQWKLQEAVQ 469
           P+ V Y + +  +C  G++ +   L+ EM  + I   ++T ++ +I  LC + ++  A  
Sbjct: 515 PNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQD 574

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           +   +  IG  PD  T+N++I  +C    + KAF +L+ M     EP   TY+ LI+G  
Sbjct: 575 VFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYF 634

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            +G + +   L   +    +  T V Y+ ++      G    A   F +M+E G  +SI 
Sbjct: 635 KSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIS 694

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
            YT      ++  G   +    E + + FH+ G +   FE+A
Sbjct: 695 TYT------IILQGLCRNNCTDEAITL-FHKLGAMNLKFEIA 729



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 218/454 (48%), Gaps = 25/454 (5%)

Query: 193 KLLIKGSDPD-IVTYTVLICGYCQIGNVEEGLKLREVMLSQ-GFKLNVIAYSVLLSSMCK 250
           +LL  G   D IVT T L C  C     +E L +    +S+ G   +  +Y+ ++ S+C 
Sbjct: 190 RLLRAGLRTDGIVTNTFLKC-LCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCG 248

Query: 251 SGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
             R  EAL +L  M +  G  PD+V+Y+++I GL  + ++ KA  L+NEM  K + PN  
Sbjct: 249 GSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVV 308

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            + +I+  LC+   + +A +    +  ++   D V Y  MI GY  LG   EA ++++++
Sbjct: 309 TYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEM 368

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
             + + P IVTFNSL+   CK+ +  +A  +  +I   G +P  ++Y+  ++ Y  EG  
Sbjct: 369 TREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRF 428

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
             +  L   M    I      + ++I    K+  + EA+ +  +M   GV+P+ +TY T+
Sbjct: 429 VDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATV 488

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I + C+   L  A + L+QM    L+P +  Y+ LI G C +GDL  A  L+  + +  I
Sbjct: 489 IAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGI 548

Query: 550 SLTKVA-YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ 608
               +  +++II + C EG V  A   F         I I D    F    L +G+    
Sbjct: 549 PRPNITFFSSIIHSLCNEGRVMNAQDVF------NLVIHIGDRPDIFTFNSLIDGY---- 598

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             C V        G +   F +   M+ +G  PD
Sbjct: 599 --CLV--------GKMDKAFGVLDAMVSAGTEPD 622



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 212/453 (46%), Gaps = 6/453 (1%)

Query: 28  KVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAI 83
           K  I +Y+ LL+      R  D M +L+  +  +    + +  +I+I+   ++  + +A+
Sbjct: 409 KPDIISYSILLHGYATEGRFVD-MNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEAL 467

Query: 84  LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGL 143
           L   E  G+   P+VV+   +++  C++G    A      M+  GL P+   Y+ LI G 
Sbjct: 468 LIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGF 527

Query: 144 CIAGSMEEALEFTNDMGRHGV-EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           C  G + +A E  ++M   G+  P+   +S +        ++  A  V   ++  G  PD
Sbjct: 528 CTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPD 587

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           I T+  LI GYC +G +++   + + M+S G + +V+ YS L++   KSGRID+ L L  
Sbjct: 588 IFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFR 647

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           EM    +KP  VTYS+++ GL +  +   A ++++EM     + +   +  IL GLC   
Sbjct: 648 EMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNN 707

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
              EA   F  L   N   ++ + N MI    K+    EA  L+  +    + P+  T+ 
Sbjct: 708 CTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYG 767

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
            +I    K G V +A  +  +++  G  PS+      +    ++G I +    + +++  
Sbjct: 768 VMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGT 827

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
            I     T +++I     + + +E ++ L   Y
Sbjct: 828 IISLEASTTSLLISLFASKGRYREQIKFLPAKY 860



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 194/402 (48%), Gaps = 6/402 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETP 60
            +++ GM+ +A+ +  +M+   +  ++ TY +++  L    R  D M  L   I +   P
Sbjct: 456 AHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKP 515

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG-PSVVSLNAIMSRYCKLGFAEVAKG 119
             V  +S+ I G C    L  A   + E   +    P++   ++I+   C  G    A+ 
Sbjct: 516 NTVVYHSL-IQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQD 574

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F L++  G  PD F++N LI G C+ G M++A    + M   G EPD +TYS L  G+ 
Sbjct: 575 VFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYF 634

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +I     + +++L K   P  VTY++++ G  + G      K+   M+  G  +++ 
Sbjct: 635 KSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIS 694

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+++L  +C++   DEA+ L +++ A+ LK ++   + +I  L K  +  +A  L+  +
Sbjct: 695 TYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASV 754

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            +  + PN+  +G +++ L ++  + EA + F S+  + C     L N +I   ++ G I
Sbjct: 755 SASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEI 814

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
            +A     ++    IS    T + LI  F   G+  +  + L
Sbjct: 815 VKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKFL 856


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 157/526 (29%), Positives = 253/526 (48%), Gaps = 33/526 (6%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLF-CLMLKYGLHPDAFS-YNILIHGLCIAGSMEEAL 153
           PS  SL   ++    LG  E A   F  L  ++   P   S YN+L         ++  +
Sbjct: 82  PSGFSLVRTLA---DLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVI 138

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
               DM    V+P   T+++L      +  +  A +V  K+  KG  P+  +  +L+ GY
Sbjct: 139 WLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGY 198

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+ G    G+ L + M S G   N +AY+ ++SS+C  G+  EA  L+ +M  VGL PD+
Sbjct: 199 CRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDI 258

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKR----ISPNSFAHGAILLGLCEKEMITEARM 329
           VT++  I  LCK  ++ +A +++ +M          PN+  +  +L G C + M  EAR 
Sbjct: 259 VTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARA 318

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
            FDS+  S  +  +  YNI + G V+ G + EA  +  ++ EK I P++ ++N L++G C
Sbjct: 319 IFDSMKNSETLS-LRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLC 377

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K G  +DAR +L  ++  G+ P  VTY+T ++ YC  G I     +L+EM      P   
Sbjct: 378 KYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMY 437

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           T  +++  L K+ +  EA  LL+ M   G   D +T NT+I   CK  +L KA ++++ M
Sbjct: 438 TCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM 497

Query: 510 W------LHNLE-----------------PTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           W      L NL                  P S TY  +I GLC  G +  A   L+ +  
Sbjct: 498 WTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIG 557

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             +S   + + T I  +C +G +  A     +M +KG   S+R Y 
Sbjct: 558 KKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYN 603



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 266/571 (46%), Gaps = 34/571 (5%)

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           ++SR+   I   ++ A  +  P   + N ++S  C++G+ E A+ +F  M + G  P+ F
Sbjct: 130 KESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEF 189

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           S  IL+ G C AG     ++  ++M   G  P+ + Y+ +        Q   A K+++K+
Sbjct: 190 SLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKM 249

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQGF---KLNVIAYSVLLSSMCK 250
              G  PDIVT+   I   C+ G + E  ++ R++ + +     K N + Y+++L   C 
Sbjct: 250 REVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCS 309

Query: 251 SGRIDEALGLLYEM---EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            G  +EA  +   M   E + L+    +Y+I + GL +  K+ +A  + NEM  K I PN
Sbjct: 310 EGMFEEARAIFDSMKNSETLSLR----SYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPN 365

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
            +++  ++ GLC+  M ++AR     +  S    D V Y+ ++ GY + G I EA  + R
Sbjct: 366 LYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLR 425

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++I+    P++ T N L++   K G+ ++A  LL  +   G     VT  T +N  C+ G
Sbjct: 426 EMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAG 485

Query: 428 NIQRLLALLQEMETKAIG-----------------------PTHVTYTVVIKGLCKQWKL 464
           N+ + + ++  M T+                          P  +TY  +I GLCK  ++
Sbjct: 486 NLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRV 545

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            EA + L +M    ++PD + ++T I ++CK   L  AF++L +M       +  TYN L
Sbjct: 546 DEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSL 605

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           I GL     +     L+  ++E  I      Y  II      G +  A     +M++KG 
Sbjct: 606 IQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGI 665

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
             +I  +         +  F   QE+ E+ L
Sbjct: 666 SPNIYTFRILIGAFFKACDFGAAQELFEIAL 696



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 159/589 (26%), Positives = 278/589 (47%), Gaps = 27/589 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y R G+    + ++ +M+      +   YN+++ +L     T     L + ++      +
Sbjct: 198 YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPD 257

Query: 63  VYTNSIVIDGLCQQSR-LQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAK 118
           + T +  I  LC+  + L+ + +F      +E G   P+ V+ N ++  +C  G  E A+
Sbjct: 258 IVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEAR 317

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M K        SYNI + GL  +G + EA    N+M    ++P+  +Y+IL  G 
Sbjct: 318 AIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGL 376

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                 S A  ++  +   G  PD VTY+ L+ GYC+ G + E   +   M+  G   N+
Sbjct: 377 CKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNM 436

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
              ++LL S+ K GR  EA  LL  M   G   D VT + +I GLCK   + KAI++ + 
Sbjct: 437 YTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSG 496

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN---CIQDVVLYNIMIDGYVK 355
           M         +  G+  LG      I      FD  I +N   C+ D + Y  +I G  K
Sbjct: 497 M---------WTRGSASLGNLGNSFID----LFD--IRNNGKKCLPDSITYATIIGGLCK 541

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +G + EA +   ++I K++SP  + F++ IY +CK GK++ A R+L  ++  G   S  T
Sbjct: 542 VGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRT 601

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y + +     E  I  +  L+ EM+ + I P   TY  +I  L +  KL++A  LL++M 
Sbjct: 602 YNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEML 661

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G++P+  T+  +I +F K  D   A +L  ++ L       + Y+ + + L   G+  
Sbjct: 662 QKGISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHKESLYSFMFNELLAGGETL 720

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            A  L  +  + +++L    Y  +I+  C +G +  A     +M++K +
Sbjct: 721 KAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQY 769



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 109/269 (40%), Gaps = 34/269 (12%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I GLC+  R+ +A   L E  GK+  P  +  +  +  YCK G    A  +   M
Sbjct: 531 TYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEM 590

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K G +    +YN LI GL     + E     ++M   G+ P+  TY+ +        ++
Sbjct: 591 EKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKL 650

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGY---CQIGNVEE-------------------- 221
             A  ++ ++L KG  P+I T+ +LI  +   C  G  +E                    
Sbjct: 651 KDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMF 710

Query: 222 -----------GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
                        +L E  L +   L    Y  L+  +CK G++D+A  +L++M      
Sbjct: 711 NELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYS 770

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            D  ++  +I  L K+   H A +    M
Sbjct: 771 FDPASFMPVIDELGKRGSKHAADEFAERM 799


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 259/529 (48%), Gaps = 27/529 (5%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            ++T + ++  L +   L DA+ F Q +  +   P+V S N ++  +      EV   L 
Sbjct: 95  TLFTRNSLLLALVRGGHLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALL 151

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G+  +  ++ +++  LC    +++A+ + N +  +  EP   TY++L  G    
Sbjct: 152 REMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKA 211

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  V ++++ KG  PDI+ Y+ LI G  + G V+E  KL ++M+++G     +AY
Sbjct: 212 HKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAY 271

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +++ +CK GRI EA+  + EM    L+P + TYS ++ G     KV KA  +  EM  
Sbjct: 272 TSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMAD 331

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +  +P++ ++   +  L       EA   F++++   C  D+  Y I+ID + K G++  
Sbjct: 332 RDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAA 391

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  + R + +  + P+   +  ++ GF K+ ++ +A  L   I   G+ PS VTY T +N
Sbjct: 392 ATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVIN 451

Query: 422 AYCEEGNIQRLLALLQEMETKA--IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           A C+   +   L LL+EM+ +   + P+ VTY+++I GL K    + A  LL +M   GV
Sbjct: 452 ALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGV 511

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD  TY ++I++      + +A +LL +M    + P   TY  L+  LC   D+  A  
Sbjct: 512 IPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILC-RSDVDAAWD 570

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           LL  +  +                      H    F  + VEKGF + +
Sbjct: 571 LLQEMMRNG---------------------HTPNEFTFKAVEKGFRLQL 598



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 209/462 (45%), Gaps = 55/462 (11%)

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           GF   +   + LL ++ + G + +ALG     ++   +P++ +++IL+RG   +D     
Sbjct: 91  GFSHTLFTRNSLLLALVRGGHLSDALGFF---QSSISEPNVSSFNILLRGFAARDDFEVV 147

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
             L  EM S+ I+ N   HG IL  LC +  + +A  YF+S+  + C   +  Y +++DG
Sbjct: 148 NALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDG 207

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
             K   +  A  ++ ++I K   P I+ ++SLI G  K G+V +AR+L+D +   G  P+
Sbjct: 208 LCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPT 267

Query: 413 AVTYTTFMNAYCEEGNIQ-----------------------------------RLLALLQ 437
           AV YT+ +   C+ G IQ                                   +  A+++
Sbjct: 268 AVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVME 327

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM  +   P  ++YT+ I+ L    + +EA ++ E M   G  PD  TY  II +FCK  
Sbjct: 328 EMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEG 387

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            +  A  +L  M    ++P    Y +++DG   +  L+ A  L   + +  I  + V Y 
Sbjct: 388 SMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYN 447

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEI--SIRDYT-------------KSF--FCMML 600
           T+I A C    + +A+    +M  +  E+  SI  Y+             ++F     M+
Sbjct: 448 TVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMI 507

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            NG  PD      ++      G +    EL   M+K+G+ PD
Sbjct: 508 DNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPD 549



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 158/354 (44%), Gaps = 18/354 (5%)

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F   ++LL L     +++A  +F S I      +V  +NI++ G+    +      L R+
Sbjct: 97  FTRNSLLLALVRGGHLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLRE 153

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  + I+ +  T   ++   C    +  A    +++  +  EP+  TYT  ++  C+   
Sbjct: 154 MKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHK 213

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           ++R   + +EM  K   P  + Y+ +I GL K  ++ EA +L++ M   G  P  + Y +
Sbjct: 214 VERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTS 273

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           I+   CKC  +++A + + +M    L P   TY+ ++ G    G ++ A  ++  + + +
Sbjct: 274 IVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRD 333

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY--TKSFFC--------- 597
            +   ++YT  I+A  + G   +A   F  MVEKG +  +  Y      FC         
Sbjct: 334 CAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAAT 393

Query: 598 ----MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               +M      P++ I  +++  F +   L    EL   ++K G+LP     N
Sbjct: 394 HVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYN 447


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 158/579 (27%), Positives = 272/579 (46%), Gaps = 49/579 (8%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVA 117
           PR   + ++V+     ++ + DA L          G  P + S NA++  + +      A
Sbjct: 79  PRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDA 138

Query: 118 KGLFCLMLKYG-----LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
              F   L +G     + P+  +YNI++  LC  G ++ A+   + + R  V PD ITYS
Sbjct: 139 DAFFA-SLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYS 197

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  G     ++  A  ++ ++      PD+V Y  L+ G  + G  E+ +++ + ++  
Sbjct: 198 TLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKD 257

Query: 233 -GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
            G + N+  Y+V+L  +CK GR  E   +   M A  L+PD++TY ILI GLC+   V  
Sbjct: 258 PGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDG 317

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A ++Y+E+    +  ++  + +++ G C+   + EA  ++DS   +  ++++  YNIMI 
Sbjct: 318 AARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG-LRNLRTYNIMIK 376

Query: 352 GYVKLGNIGEAVQLYRQLIEKRIS--PSIVTFNSLIYGFCKNGKV-------ADAR---- 398
           G    G + EA++L+  L+EK ++  P  VTF +LI+G C+NG          +AR    
Sbjct: 377 GLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGK 435

Query: 399 ------------------RLLDTIKLH------GLEPSAVTYTTFMNAYCEEGNIQRLLA 434
                             RL+D +K++      G +P++  Y   ++ +C+       + 
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +  +M      PT +TY  +I GLCK  K QEA  +  +M   G TPD  TY ++IR   
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE-HNISLTK 553
             K +  A  +  Q+    L+     +NILI GLC  G +  A  +   ++E  N     
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           V Y T++      G + KA T +  + E G E  I  Y 
Sbjct: 616 VTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYN 654



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 155/576 (26%), Positives = 273/576 (47%), Gaps = 9/576 (1%)

Query: 3   AFVYSRTGMVHDAVFVIAKMKELDLKVS--IQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           AFV +R     DA F          +++  +QTYN +L +L      D    L+D ++  
Sbjct: 128 AFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRR 187

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEV 116
           +   +  T S ++ GL +Q RL  A+  L E       P VV  NA++    K G F +V
Sbjct: 188 QVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKV 247

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
            +    L+   G  P+  +YN+++ GLC  G  +E  E    M  + ++PD ITY IL  
Sbjct: 248 MRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIH 307

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G      + GA +V  +++  G   D   Y  L+ G+CQ G V+E  K  +     G + 
Sbjct: 308 GLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR- 366

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEA-VGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           N+  Y++++  +  SG +DEA+ L   +E  V   PD VT+  LI GLC+    +KA  +
Sbjct: 367 NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTI 426

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           + E        + F++ +++ GLC    + +A   ++ +    C  +  +YN +I G+ +
Sbjct: 427 FEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQ 486

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +    +AV++Y ++ +   SP+++T+N+LI G CK  K  +A  +   +  +G  P   T
Sbjct: 487 VYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITT 546

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y + +     +  I   L++ +++  K +    + + ++I GLC   K+ EA+ +  DM 
Sbjct: 547 YGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMK 606

Query: 476 -VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
                 P+ +TYNT++    +   + KA  L   +    LEP   +YN  I GLC    +
Sbjct: 607 EKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRI 666

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
                LL  +    I  T + +  +++A    G + 
Sbjct: 667 HEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/562 (24%), Positives = 266/562 (47%), Gaps = 41/562 (7%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETA----GKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           + +++ ++D   +  R  DA  F    +    G+   P++ + N ++   C  G  + A 
Sbjct: 119 IRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAV 178

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            LF  + +  + PD  +Y+ L+ GL     ++ AL+  ++M R  V+PD + Y+ L  G 
Sbjct: 179 TLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGC 238

Query: 179 HLLSQISGAWKVIQKLLI-KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
               +     +V  KL+   G+ P++ TY V++ G C+ G  +E  ++ E M++   + +
Sbjct: 239 FKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPD 298

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           VI Y +L+  +C+SG +D A  +  E+   GL  D   Y+ L++G C+  +V +A + ++
Sbjct: 299 VITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWD 358

Query: 298 ---------------------------------EMCSKRIS--PNSFAHGAILLGLCEKE 322
                                            ++  K ++  P++   G ++ GLC+  
Sbjct: 359 SAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNG 418

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
              +A   F+   +S    DV  Y+ MI+G   +G + +AV++Y ++ +    P+   +N
Sbjct: 419 FANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYN 478

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           +LI GFC+  + +DA R+   +  +G  P+ +TY T ++  C+    Q   ++ +EM   
Sbjct: 479 ALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVEN 538

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
              P   TY  +I+GL    K+ +A+ + + +   G+  D + +N +I   C    + +A
Sbjct: 539 GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEA 598

Query: 503 FQLLNQM-WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
             + + M    N  P   TYN L+DGL   G +  A  L  S+ E  +    ++Y T IK
Sbjct: 599 LHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIK 658

Query: 562 AHCAEGDVHKAMTFFCQMVEKG 583
             C+   +H+ +    +++ +G
Sbjct: 659 GLCSCDRIHEGIQLLDEVLSRG 680



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 27/257 (10%)

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG----PTHVTY 451
           DA R L +I   G  P   ++   ++A+          A    +   A G    P   TY
Sbjct: 104 DAFRALPSIL--GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTY 161

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            +V++ LC +  L  AV L + +    V PD+ITY+T++    K   L  A  LL++M  
Sbjct: 162 NIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPR 221

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA-YTTIIKAHCAEGDVH 570
             ++P    YN L+ G    G+ +    +   L +   +   +A Y  ++   C      
Sbjct: 222 SRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCK----- 276

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
                F +  E G E+  R         M++N   PD     +++    + GD+     +
Sbjct: 277 -----FGRFKEVG-EVWER---------MVANNLQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 631 AAVMIKSGLLPDKFLIN 647
            + +IK+GL+ D  + N
Sbjct: 322 YSEIIKTGLVIDAAMYN 338



 Score = 40.4 bits (93), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 4/112 (3%)

Query: 9   TGMVHDAVFVIAKMKEL-DLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
            G V +A+ V + MKE  +   ++ TYN+L   LY   + D    L+  I       ++ 
Sbjct: 592 AGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDII 651

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           + +  I GLC   R+ + I  L E   +   P+V++ N ++    K G  +V
Sbjct: 652 SYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQV 703


>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
 gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
          Length = 846

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 236/485 (48%), Gaps = 8/485 (1%)

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           + G    A  +F  M   G  P   ++N +I G C  G +  A      MG  G+ P+  
Sbjct: 196 RSGEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVC 255

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+IL KG  +      A+K+ +++   G +P +VTY +L+   C  G + E  +L + M
Sbjct: 256 SYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEM 315

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
              G + N I ++VL+    K+GR+D+A     EM+A GL PD  T++I+  G  K    
Sbjct: 316 AQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHA 375

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILL--GLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
            + +  ++   S  +     A G  +L   LC    + +A       I       V  +N
Sbjct: 376 AQLVHDHDMFGSHML-----ADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFN 430

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I  Y K G   EA +LYR + +  ++PS  TFN LI G C  G++ +A+ LL+ +   
Sbjct: 431 ALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSK 490

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G   S  ++T  ++A   EGN    L    +M    + P  + ++  I GLC+   + EA
Sbjct: 491 GYCLS-TSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEA 549

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            Q   +M   G+ P+  TYN+II + C+  ++ +A +L   M  + L P   T NILIDG
Sbjct: 550 YQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDG 609

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC  G L+  D LL+ +  + ++   V Y TII A+C   D++ AM F  +M+  G E  
Sbjct: 610 LCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPD 669

Query: 588 IRDYT 592
           I  Y 
Sbjct: 670 IFTYN 674



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/533 (26%), Positives = 251/533 (47%), Gaps = 36/533 (6%)

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
            +E A +   PS+ + NA++  +C  G   VA GL  +M ++G+ P+  SYNILI G C+
Sbjct: 207 FEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCV 266

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
            G   +A +   +M R G EP  +TY+IL        ++  A ++  ++   G   + +T
Sbjct: 267 FGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTIT 326

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGF-----KLNVIA-------------------- 240
           + VLI GY + G +++       M ++G        N+IA                    
Sbjct: 327 FNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFG 386

Query: 241 -------YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
                    +L+  +C   R+D+A  LL      G    +  ++ LI    K+    +A 
Sbjct: 387 SHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAF 446

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN-CIQDVVLYNIMIDG 352
           +LY  M    ++P+S     +++GLC +  + EA++  + ++    C+     + I +D 
Sbjct: 447 ELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS--TSFTICLDA 504

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
             + GN   A++ +  + +  + P  + F++ I G C+   V +A +    +   G+ P+
Sbjct: 505 SFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPN 564

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             TY + ++A C  GN+   L L Q M    + P   T  ++I GLC++ KL+    LL 
Sbjct: 565 NFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLL 624

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           DM   G+TPD +TYNTII ++C+ KD+  A   +N+M     EP   TYNI +  LC N 
Sbjct: 625 DMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNH 684

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            L  A  +L  L         V Y T++   C++  + +AM    ++++  F+
Sbjct: 685 MLNQAGKVLDELVAMGCPPDSVTYNTLMDGICSDV-LDRAMILTGRLIKMAFQ 736



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 146/599 (24%), Positives = 257/599 (42%), Gaps = 96/599 (16%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSE--------- 58
           R+G VH A  V  +M     + S+ T+N+++    H  +       ++V+          
Sbjct: 196 RSGEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGL-------VRVASGLLGIMGEF 248

Query: 59  --TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
              P NV + +I+I G C     +DA    +E       P+VV+ N ++   C  G    
Sbjct: 249 GIVP-NVCSYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPE 307

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A+ LF  M + G+  +  ++N+LI G    G M++A     +M   G+ PD+ T++I+A 
Sbjct: 308 ARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAA 367

Query: 177 GF------------------HLLS--------------QISGAWKVIQKLLIKGSDPDIV 204
           G                   H+L+              ++  AW++++  + +G+   + 
Sbjct: 368 GAYKFGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVT 427

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY-- 262
            +  LI  Y + G  EE  +L  +M   G   +   ++ L+  +C  GR+DEA  LL   
Sbjct: 428 GFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHM 487

Query: 263 --------------------------------EMEAVGLKPDLVTYSILIRGLCKQDKVH 290
                                           +M  +GL+PD + +S  I GLC+ D V+
Sbjct: 488 VSKGYCLSTSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVN 547

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A Q + EM ++ I PN+F + +I+  LC    +TEA     ++  +  + D+   NI+I
Sbjct: 548 EAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILI 607

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           DG  + G +     L   +    ++P  VT+N++I  +C+   +  A   ++ +   G E
Sbjct: 608 DGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCE 667

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P   TY  +M++ C    + +   +L E+      P  VTY  ++ G+C    L  A+ L
Sbjct: 668 PDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICSD-VLDRAMIL 726

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS-----ATYNIL 524
              +  +   P+ IT N  +  FCK     + F     MW   L   S     AT NI+
Sbjct: 727 TGRLIKMAFQPNTITLNVFLSHFCK-----QGFGKRALMWAEKLREDSFVFDDATRNII 780



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 107/455 (23%), Positives = 196/455 (43%), Gaps = 48/455 (10%)

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           A  + L +   +G   EAL +L  +   G  P L   + L+R L +  +VH A  ++ EM
Sbjct: 151 ALRLALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEM 210

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            ++   P+     A++LG C + ++  A      +     + +V  YNI+I G+   G  
Sbjct: 211 AARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWS 270

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A +L+ ++      P++VT+N L+   C  G++ +ARRL D +   G++ + +T+   
Sbjct: 271 RDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVL 330

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG---------------------- 457
           ++ Y + G + +  A  +EM+ + + P   T+ ++  G                      
Sbjct: 331 IDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHML 390

Query: 458 ----------LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
                     LC   +L +A +LL      G       +N +I ++ K     +AF+L  
Sbjct: 391 ADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYR 450

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M    L P+S+T+N LI GLC  G L  A  LL  +      L+  ++T  + A   EG
Sbjct: 451 IMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS-TSFTICLDASFREG 509

Query: 568 DVHKAMTFFCQMVEKGFE---ISIRDYTKSF------------FCMMLSNGFPPDQEICE 612
           +   A+  +  M + G +   I+   Y                F  M + G  P+     
Sbjct: 510 NAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYN 569

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            ++ A  + G++    +L   M ++GL+PD +  N
Sbjct: 570 SIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSN 604



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 165/347 (47%), Gaps = 3/347 (0%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD--LYDDIKVSETPRN 62
            YS+ G+  +A  +   M +L L  S  T+N L+  L +   + +  L  +  VS+    
Sbjct: 435 AYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCL 494

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             + +I +D   ++     A+    +       P  ++ +A ++  C+L +   A   F 
Sbjct: 495 STSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFA 554

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G+ P+ F+YN +I  LC AG+M EAL+   +M ++G+ PD  T +IL  G     
Sbjct: 555 EMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREG 614

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++     ++  +   G  PD VTY  +I  YC+  ++   +     ML+ G + ++  Y+
Sbjct: 615 KLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYN 674

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           + + S+C +  +++A  +L E+ A+G  PD VTY+ L+ G+C  D + +A+ L   +   
Sbjct: 675 IWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGIC-SDVLDRAMILTGRLIKM 733

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
              PN+      L   C++     A M+ + L   + + D    NI+
Sbjct: 734 AFQPNTITLNVFLSHFCKQGFGKRALMWAEKLREDSFVFDDATRNII 780


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 212/431 (49%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L DA+            PS V    +++   K+        L   M  +G+ PD ++ NI
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI+  C    +  A      + + G +PD  T++ L +G  +  +I  A  +  K + +G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD+VTY  L+ G C++GN    ++L   M+ +  + NVIAY+ ++ S+CK  ++ EA 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L  EM   G+ PD+ TY+ LI  LC   +      L NEM + +I PN      ++  L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++ MI  A    D +I      DVV Y  ++DG+     + EAV+++  ++ K   P++
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            ++N LI G+C+  ++  A  LL+ + L GL    VTY T ++  C  G +Q  +AL  E
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M      P  VTY +++  LCK   L EA+ LL+ +    +  D + YN  I   C+  +
Sbjct: 453 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 512

Query: 499 LRKAFQLLNQM 509
           L  A  L + +
Sbjct: 513 LEAARDLFSNL 523



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 214/425 (50%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  ML     P    +  L+  +         L  +  M   G+ PD  T +IL   F  
Sbjct: 100 FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 159

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L ++  A+ V+ KLL  G  PD  T+  LI G C  G + E L L +  + +GF+ +V+ 
Sbjct: 160 LRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVT 219

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y  L++ +CK G    A+ LL  M     +P+++ Y+ +I  LCK  +V +A  L++EM 
Sbjct: 220 YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI 279

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +K ISP+ F + +++  LC            + ++ S  + +VV+++ ++D   K G I 
Sbjct: 280 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIA 339

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A  +   +I++ + P +VT+ +L+ G C   ++ +A ++ DT+   G  P+  +Y   +
Sbjct: 340 IAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILI 399

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N YC+   + + + LL++M  + +    VTY  +I GLC   +LQ A+ L  +M   G  
Sbjct: 400 NGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI 459

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD +TY  ++   CK   L +A  LL  +   NL+     YNI IDG+C  G+L+ A  L
Sbjct: 460 PDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDL 519

Query: 541 LVSLQ 545
             +L 
Sbjct: 520 FSNLS 524



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 204/437 (46%)

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           ++++AL   N M      P  + ++ L      +   S    +  ++   G  PD+ T  
Sbjct: 92  TLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLN 151

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +LI  +C +  +     +   +L  G + +   ++ L+  +C  G+I EAL L  +    
Sbjct: 152 ILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 211

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G +PD+VTY  L+ GLCK      AI+L   M  K   PN  A+  I+  LC+   +TEA
Sbjct: 212 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 271

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F  +I      D+  YN +I     L        L  +++  +I P++V F++++  
Sbjct: 272 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 331

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G +A A  ++D +   G+EP  VTYT  M+ +C    +   + +   M  K   P 
Sbjct: 332 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 391

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             +Y ++I G C+  ++ +A+ LLE M + G+  D +TYNT+I   C    L+ A  L +
Sbjct: 392 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 451

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M      P   TY IL+D LC N  L  A  LL +++  N+    + Y   I   C  G
Sbjct: 452 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 511

Query: 568 DVHKAMTFFCQMVEKGF 584
           ++  A   F  +  +GF
Sbjct: 512 ELEAARDLFSNLSCQGF 528



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 185/358 (51%), Gaps = 3/358 (0%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVID 71
           A  V+AK+ +L  +    T+N+L+  L     + +   L+D         +V T   +++
Sbjct: 166 AFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMN 225

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           GLC+      AI  L+    K   P+V++ N I+   CK      A  LF  M+  G+ P
Sbjct: 226 GLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISP 285

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D F+YN LIH LC     +      N+M    + P+ + +S +         I+ A  V+
Sbjct: 286 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 345

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             ++ +G +PD+VTYT L+ G+C    ++E +K+ + M+ +G   NV +Y++L++  C+ 
Sbjct: 346 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 405

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            R+D+A+GLL +M   GL  D VTY+ LI GLC   ++  AI L++EM +    P+   +
Sbjct: 406 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 465

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
             +L  LC+   + EA +   ++  SN   D+++YNI IDG  + G +  A  L+  L
Sbjct: 466 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 523



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 200/435 (45%), Gaps = 3/435 (0%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DA+    +M  +    S   +  LL +   ++H   +  L   +     P +VYT +I+I
Sbjct: 95  DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 154

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
           +  C   RL  A   L +       P   + N ++   C  G    A  LF   +  G  
Sbjct: 155 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 214

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD  +Y  L++GLC  G+   A+     M +    P+ I Y+ +        Q++ A+ +
Sbjct: 215 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL 274

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
             +++ KG  PDI TY  LI   C +   +    L   M++     NV+ +S ++ ++CK
Sbjct: 275 FSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 334

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G I  A  ++  M   G++PD+VTY+ L+ G C + ++ +A+++++ M  K   PN  +
Sbjct: 335 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 394

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C+ + + +A    + + +   I D V YN +I G   +G +  A+ L+ +++
Sbjct: 395 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 454

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
                P +VT+  L+   CKN  +A+A  LL  I+   L+   + Y   ++  C  G ++
Sbjct: 455 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 514

Query: 431 RLLALLQEMETKAIG 445
               L   +  +   
Sbjct: 515 AARDLFSNLSCQGFA 529



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 134/273 (49%), Gaps = 6/273 (2%)

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           DV   NI+I+ +  L  +G A  +  +L++    P   TFN+LI G C  GK+ +A  L 
Sbjct: 146 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLF 205

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           D     G +P  VTY T MN  C+ GN    + LL+ M  K   P  + Y  +I  LCK 
Sbjct: 206 DKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKD 265

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++ EA  L  +M   G++PD  TYN++I + C   + +    LLN+M    + P    +
Sbjct: 266 RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 325

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           + ++D LC  G +  A  ++  + +  +    V YT ++  HC   ++ +A+  F  MV 
Sbjct: 326 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 385

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
           KG   ++R Y       +L NG+   Q + + M
Sbjct: 386 KGCVPNVRSYN------ILINGYCQIQRMDKAM 412



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 122/269 (45%)

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           + +A   F+ ++  +     V +  ++    K+ +    + L  Q+    I P + T N 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI  FC   ++  A  +L  +   G +P   T+ T +   C EG I   L L  +   + 
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             P  VTY  ++ GLCK      A++LL  M      P+ I YNTII S CK + + +AF
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L ++M    + P   TYN LI  LC   + K+   LL  +    I    V ++T++ A 
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           C EG +  A      M+++G E  +  YT
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYT 361


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 164/668 (24%), Positives = 291/668 (43%), Gaps = 76/668 (11%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           W +Y+ +    T   +  N++ IDG C+   +  A   ++ +   +    +V+ N ++  
Sbjct: 218 WVMYNLVDGGVTKDVIGLNTL-IDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKA 276

Query: 108 YCKLGFAEVAKGLFCLMLKY-------------------GLHPDAFSYNILIHGLCIAGS 148
           +CK G    A+ LF  +L +                    L P   +Y  LI   C    
Sbjct: 277 FCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVG 336

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +EE+      M  +G+ PD +T S +  GF    +++ A  + +++   G DP+ V+Y  
Sbjct: 337 VEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYAT 396

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           +I    + G V E   L+  M+ +G   +++  + ++  + K G+  EA  +   +  + 
Sbjct: 397 IINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLN 456

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           L P+ VTYS L+ G CK  K+  A  +  +M  + + PN     +I+ G  +K M+++A 
Sbjct: 457 LAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAV 516

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
                ++  N + + ++Y I+IDGY K G    A    +++  +R+  S V F+ L+   
Sbjct: 517 DVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNL 576

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            + G++ +AR L+  +   G++P  V Y + ++ Y +EGN    L+++QEM+ K I    
Sbjct: 577 KRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDV 636

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           V Y  +IKGL +  K  +   +   M  +G+ PD ITYNTII ++C       A  +LN+
Sbjct: 637 VAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNE 695

Query: 509 MWLHNLEPTSATYNILIDGLCVNG------------------------------------ 532
           M  + + P + TYNILI GLC  G                                    
Sbjct: 696 MKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGL 755

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +LK    +L  + +  IS   V Y  +I+ +C    V KA+  + QM   G   +I  Y 
Sbjct: 756 ELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYN 815

Query: 593 K-------------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
                                    M   G  P+    ++++  + + G+      L   
Sbjct: 816 TLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIE 875

Query: 634 MIKSGLLP 641
           MI  G +P
Sbjct: 876 MITKGFVP 883



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 152/594 (25%), Positives = 280/594 (47%), Gaps = 21/594 (3%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + VI G CQ+  +      L E   +      ++ N ++  YC++G  + A+ +   +
Sbjct: 164 TYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNL 223

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF------ 178
           +  G+  D    N LI G C A  M +A E   +  R  V+ D +TY+ L K F      
Sbjct: 224 VDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDL 283

Query: 179 ----HLLSQISGAWK---------VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
                L ++I G WK         V+ +  IK   P +VTYT LI  YC+   VEE   L
Sbjct: 284 TRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSL 343

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
            + M+  G   +V+  S +L   C+ G++ EA  L  EM  +GL P+ V+Y+ +I  L K
Sbjct: 344 YKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFK 403

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
             +V +A  L ++M  + IS +      ++ GL +     EA   F++++  N   + V 
Sbjct: 404 SGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVT 463

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y+ ++DGY KLG +  A  + +++ ++ + P+++TF+S+I G+ K G ++ A  +L  + 
Sbjct: 464 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 523

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
              + P+ + Y   ++ Y + G         +EM+++ +  ++V + +++  L +  ++ 
Sbjct: 524 QRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMD 583

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA  L+ DMY  G+ PD + Y ++I  + K  +   A  ++ +M   N+      YN LI
Sbjct: 584 EARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALI 643

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            GL   G   +   +   + E  ++   + Y TII  +C +G    A+    +M   G  
Sbjct: 644 KGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIM 702

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
            +   Y       +   GF P     + ++ A+ +      + ++   ++ SGL
Sbjct: 703 PNAVTYN-ILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGL 755



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/585 (26%), Positives = 266/585 (45%), Gaps = 35/585 (5%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V S+N ++   CK+G  ++A G   L     +  D  +YN +I G C  G +++    
Sbjct: 127 PDVFSVNVLVHSLCKVGDLDLALGY--LRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGL 184

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            ++M + G+  D+IT +IL KG+  +  +  A  V+  L+  G   D++    LI GYC+
Sbjct: 185 LSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCE 244

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM----------- 264
              + +  +L E       K++++ Y+ LL + CK+G +  A  L  E+           
Sbjct: 245 AVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLK 304

Query: 265 --------EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
                   E   L+P LVTY+ LI   CK   V ++  LY +M    I P+     +IL 
Sbjct: 305 NNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILY 364

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           G C    +TEA + F  +       + V Y  +I+   K G + EA  L  Q++ + IS 
Sbjct: 365 GFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISF 424

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            IVT  +++ G  K GK  +A  + +TI    L P+ VTY+  ++ YC+ G ++    +L
Sbjct: 425 DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVL 484

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           Q+ME + + P  +T++ +I G  K+  L +AV +L +M    V P+ I Y  +I  + K 
Sbjct: 485 QKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 544

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
            +   A     +M    LE ++  ++IL++ L   G +  A  L++ +    I    V Y
Sbjct: 545 GEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNY 604

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI-------------RDYTKSFFC-MMLSN 602
            ++I  +  EG+   A++   +M EK     +               Y   + C  M+  
Sbjct: 605 ASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIEL 664

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           G  PD      ++  +   G      ++   M   G++P+    N
Sbjct: 665 GLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYN 709



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 225/476 (47%), Gaps = 42/476 (8%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K++  P N  T S ++DG C+  +++ A L LQ+   +   P+V++ ++I++ Y K G 
Sbjct: 453 LKLNLAP-NCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGM 511

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A  +   M++  + P+   Y ILI G   AG  + A +F  +M    +E   + + I
Sbjct: 512 LSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDI 571

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L      + ++  A  +I  +  KG DPDIV Y  LI GY + GN    L + + M  + 
Sbjct: 572 LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKN 631

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            + +V+AY+ L+  + + G+ D    +   M  +GL PD +TY+ +I   C + K   A+
Sbjct: 632 IRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTEDAL 690

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMIT---------------------------- 325
            + NEM S  I PN+  +  ++ GLC+   +                             
Sbjct: 691 DILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKL 750

Query: 326 --------EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
                     ++  D ++      D+V YN +I GY    ++ +A++ Y Q+    I+P+
Sbjct: 751 VASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPN 810

Query: 378 IVTFNSLIYGFCKNG----KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           I T+N+L+ G    G     + +  +L+  +   GL P+A TY   ++ Y   GN ++ +
Sbjct: 811 ITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTI 870

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
            L  EM TK   PT  TY V+I    K  K+ EA +LL D+   G  P+  TY+ +
Sbjct: 871 ILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 926



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/587 (24%), Positives = 268/587 (45%), Gaps = 69/587 (11%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I+ L +  R+ +A     +   +     +V+   +M    K+G  + A+ +F  +LK
Sbjct: 395 ATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK 454

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             L P+  +Y+ L+ G C  G ME A      M +  V P+ IT+S +  G+     +S 
Sbjct: 455 LNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSK 514

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  V+++++ +   P+ + Y +LI GY + G  +      + M S+  + + + + +LL+
Sbjct: 515 AVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLN 574

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           ++ + GR+DEA  L+ +M + G+ PD+V Y+ LI G  K+     A+ +  EM  K I  
Sbjct: 575 NLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIR- 633

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
                                   FD          VV YN +I G ++LG   +   + 
Sbjct: 634 ------------------------FD----------VVAYNALIKGLLRLGKY-DPRYVC 658

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++IE  ++P  +T+N++I  +C  GK  DA  +L+ +K +G+ P+AVTY   +   C+ 
Sbjct: 659 SRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKT 718

Query: 427 GNI-----QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           G +      + L        KA     +   +V  GL  + K Q+ V  L++M   G++ 
Sbjct: 719 GFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGL--ELKRQKVV--LDEMVKRGISA 774

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG----DLKNA 537
           D +TYN +IR +C    + KA +  +QM++  + P   TYN L+ GL   G     ++  
Sbjct: 775 DLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEET 834

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
           + L+  + E  +      Y  ++  +   G+  K +    +M+ KGF  +++ Y      
Sbjct: 835 EKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTY------ 888

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                          V++  + + G +    EL   ++  G +P+ F
Sbjct: 889 --------------NVLISDYAKSGKMIEARELLNDLLTKGRIPNSF 921



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 127/525 (24%), Positives = 234/525 (44%), Gaps = 36/525 (6%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A   F  M   GL P    +N L++    +G + +     +DM   GV PD  + ++L  
Sbjct: 78  ASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVH 137

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
               +  +  A   ++   +   D D VTY  +I G+CQ G V++G  L   M+ +G   
Sbjct: 138 SLCKVGDLDLALGYLRNNDV--VDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCF 195

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + I  ++L+   C+ G +  A  ++Y +   G+  D++  + LI G C+   + +A +L 
Sbjct: 196 DSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELI 255

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI-------------------MS 337
                  +  +   +  +L   C+   +T A   F+ ++                   + 
Sbjct: 256 ENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIK 315

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
           N    +V Y  +I  Y K   + E+  LY+++I   I P +VT +S++YGFC++GK+ +A
Sbjct: 316 NLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEA 375

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             L   +   GL+P+ V+Y T +N+  + G +     L  +M  + I    VT T V+ G
Sbjct: 376 AVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDG 435

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           L K  K +EA ++ E +  + + P+ +TY+ ++  +CK   +  A  +L +M   ++ P 
Sbjct: 436 LFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPN 495

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             T++ +I+G    G L  A  +L  + + N+    + Y  +I  +   G+   A  F  
Sbjct: 496 VITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCK 555

Query: 578 QMVEKGFE---------------ISIRDYTKSFFCMMLSNGFPPD 607
           +M  +  E               +   D  +S    M S G  PD
Sbjct: 556 EMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPD 600



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 127/557 (22%), Positives = 247/557 (44%), Gaps = 51/557 (9%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
            FC +++  L  D FS          A  +   L F N           + Y   A G  
Sbjct: 61  FFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWN----------TLLYQFNASG-- 108

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           L+SQ+   +     +L  G  PD+ +  VL+   C++G+++  L L  +  +    ++ +
Sbjct: 109 LVSQVKLMY---SDMLFCGVVPDVFSVNVLVHSLCKVGDLD--LALGYLRNNDVVDIDNV 163

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ ++   C+ G +D+  GLL EM   GL  D +T +IL++G C+   V  A  +   +
Sbjct: 164 TYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNL 223

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               ++ +      ++ G CE  ++++A    ++   S+   D+V YN ++  + K G++
Sbjct: 224 VDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDL 283

Query: 360 GEAVQLYRQLIE-------------------KRISPSIVTFNSLIYGFCKNGKVADARRL 400
             A  L+ +++                    K + P++VT+ +LI  +CK   V ++  L
Sbjct: 284 TRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSL 343

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
              + ++G+ P  VT ++ +  +C  G +     L +EM    + P HV+Y  +I  L K
Sbjct: 344 YKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFK 403

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             ++ EA  L   M V G++ D +T  T++    K    ++A ++   +   NL P   T
Sbjct: 404 SGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVT 463

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y+ L+DG C  G ++ A+ +L  +++ ++    + +++II  +  +G + KA+    +MV
Sbjct: 464 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 523

Query: 581 EKG---------------FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
           ++                F+   +D    F   M S        I +++L    + G + 
Sbjct: 524 QRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMD 583

Query: 626 SVFELAAVMIKSGLLPD 642
               L   M   G+ PD
Sbjct: 584 EARSLIIDMYSKGIDPD 600



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 219/486 (45%), Gaps = 49/486 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y + G +  A  V+ KM++  +  ++ T++S++       ++    D ++     RNV  
Sbjct: 471 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLR-EMVQRNVMP 529

Query: 66  NSIV----IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+IV    IDG  +      A  F +E   +    S V  + +++   ++G  + A+ L 
Sbjct: 530 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 589

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G+ PD  +Y  LI G    G+   AL    +M    +  D + Y+ L KG   L
Sbjct: 590 IDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRL 649

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +    + V  +++  G  PD +TY  +I  YC  G  E+ L +   M S G   N + Y
Sbjct: 650 GKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTY 708

Query: 242 SVLLSSMCKSG-------------------------RIDEAL---GL--------LYEME 265
           ++L+  +CK+G                         +I E L   GL        L EM 
Sbjct: 709 NILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMV 768

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G+  DLVTY+ LIRG C    V KA++ Y++M    I+PN   +  +L GL    ++ 
Sbjct: 769 KRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLME 828

Query: 326 EARMYFDSLIMS----NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
           E     + L+        + +   Y+I++ GY ++GN  + + L+ ++I K   P++ T+
Sbjct: 829 EMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTY 888

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE---EGNIQRLLALLQE 438
           N LI  + K+GK+ +AR LL+ +   G  P++ TY      +     E  I R L    E
Sbjct: 889 NVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYE 948

Query: 439 METKAI 444
           +E K +
Sbjct: 949 IEVKKL 954



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 184/423 (43%), Gaps = 47/423 (11%)

Query: 21  KMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
           +MK   L+ S   ++ LL NL+     D    L  D+       ++   + +IDG  ++ 
Sbjct: 556 EMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEG 615

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
               A+  +QE   K     VV+ NA++    +LG  +  + +   M++ GL PD  +YN
Sbjct: 616 NQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYN 674

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF----------------HLL 181
            +I+  CI G  E+AL+  N+M  +G+ P+A+TY+IL  G                    
Sbjct: 675 TIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAY 734

Query: 182 SQISGAWKVIQ--------------------KLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
           S+   A K++Q                    +++ +G   D+VTY  LI GYC   +VE+
Sbjct: 735 SRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEK 794

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSG----RIDEALGLLYEMEAVGLKPDLVTYS 277
            LK    M   G   N+  Y+ LL  +  +G     ++E   L+ EM   GL P+  TY 
Sbjct: 795 ALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYD 854

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           IL+ G  +     K I L+ EM +K   P    +  ++    +   + EAR   + L+  
Sbjct: 855 ILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTK 914

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
             I +   Y+I+  G++ L    E  +  ++  E  +   ++        F K    A+ 
Sbjct: 915 GRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGLKFSKK---AEI 971

Query: 398 RRL 400
           RRL
Sbjct: 972 RRL 974


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 157/526 (29%), Positives = 253/526 (48%), Gaps = 33/526 (6%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLF-CLMLKYGLHPDAFS-YNILIHGLCIAGSMEEAL 153
           PS  SL   ++    LG  E A   F  L  ++   P   S YN+L         ++  +
Sbjct: 82  PSGFSLVRTLA---DLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVI 138

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
               DM    V+P   T+++L      +  +  A +V  K+  KG  P+  +  +L+ GY
Sbjct: 139 WLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGY 198

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+ G    G+ L + M S G   N +AY+ ++SS+C  G+  EA  L+ +M  VGL PD+
Sbjct: 199 CRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDI 258

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKR----ISPNSFAHGAILLGLCEKEMITEARM 329
           VT++  I  LCK  ++ +A +++ +M          PN+  +  +L G C + M  EAR 
Sbjct: 259 VTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARA 318

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
            FDS+  S  +  +  YNI + G V+ G + EA  +  ++ EK I P++ ++N L++G C
Sbjct: 319 IFDSMKNSETLS-LRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLC 377

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K G  +DAR +L  ++  G+ P  VTY+T ++ YC  G I     +L+EM      P   
Sbjct: 378 KYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMY 437

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           T  +++  L K+ +  EA  LL+ M   G   D +T NT+I   CK  +L KA ++++ M
Sbjct: 438 TCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM 497

Query: 510 W------LHNLE-----------------PTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           W      L NL                  P S TY  +I GLC  G +  A   L+ +  
Sbjct: 498 WTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIG 557

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             +S   + + T I  +C +G +  A     +M +KG   S+R Y 
Sbjct: 558 KKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYN 603



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 265/571 (46%), Gaps = 34/571 (5%)

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           ++SR+   I   ++ A     P   + N ++S  C++G+ E A+ +F  M + G  P+ F
Sbjct: 130 KESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEF 189

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           S  IL+ G C AG     ++  ++M   G  P+ + Y+ +        Q   A K+++K+
Sbjct: 190 SLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKM 249

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQGF---KLNVIAYSVLLSSMCK 250
              G  PDIVT+   I   C+ G + E  ++ R++ + +     K N + Y+++L   C 
Sbjct: 250 REVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCS 309

Query: 251 SGRIDEALGLLYEM---EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            G  +EA  +   M   E + L+    +Y+I + GL +  K+ +A  + NEM  K I PN
Sbjct: 310 EGMFEEARAIFDSMKNSETLSLR----SYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPN 365

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
            +++  ++ GLC+  M ++AR     +  S    D V Y+ ++ GY + G I EA  + R
Sbjct: 366 LYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLR 425

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++I+    P++ T N L++   K G+ ++A  LL  +   G     VT  T +N  C+ G
Sbjct: 426 EMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAG 485

Query: 428 NIQRLLALLQEMETKAIG-----------------------PTHVTYTVVIKGLCKQWKL 464
           N+ + + ++  M T+                          P  +TY  +I GLCK  ++
Sbjct: 486 NLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRV 545

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            EA + L +M    ++PD + ++T I ++CK   L  AF++L +M       +  TYN L
Sbjct: 546 DEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSL 605

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           I GL     +     L+  ++E  I      Y  II      G +  A     +M++KG 
Sbjct: 606 IQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGI 665

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
             +I  +         +  F   QE+ E+ L
Sbjct: 666 SPNIYTFRILIGAFFKACDFGAAQELFEIAL 696



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 159/589 (26%), Positives = 279/589 (47%), Gaps = 27/589 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y R G+    + ++ +M+      +   YN+++ +L     T     L + ++      +
Sbjct: 198 YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPD 257

Query: 63  VYTNSIVIDGLCQQSR-LQDAILFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEVAK 118
           + T +  I  LC+  + L+ + +F      +E G   P+ V+ N ++  +C  G  E A+
Sbjct: 258 IVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEAR 317

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M K        SYNI + GL  +G + EA    N+M    ++P+  +Y+IL  G 
Sbjct: 318 AIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGL 376

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                 S A  ++  +   G  PD VTY+ L+ GYC+ G + E   +   M+  G   N+
Sbjct: 377 CKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNM 436

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
              ++LL S+ K GR  EA  LL  M   G   D VT + +I GLCK   + KAI++ + 
Sbjct: 437 YTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSG 496

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN---CIQDVVLYNIMIDGYVK 355
           M ++         G+  LG      I      FD  I +N   C+ D + Y  +I G  K
Sbjct: 497 MWTR---------GSASLGNLGNSFID----LFD--IRNNGKKCLPDSITYATIIGGLCK 541

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +G + EA +   ++I K++SP  + F++ IY +CK GK++ A R+L  ++  G   S  T
Sbjct: 542 VGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRT 601

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y + +     E  I  +  L+ EM+ + I P   TY  +I  L +  KL++A  LL++M 
Sbjct: 602 YNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEML 661

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G++P+  T+  +I +F K  D   A +L  ++ L       + Y+ + + L   G+  
Sbjct: 662 QKGISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHKESLYSFMFNELLAGGETL 720

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            A  L  +  + +++L    Y  +I+  C +G +  A     +M++K +
Sbjct: 721 KAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQY 769



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 109/269 (40%), Gaps = 34/269 (12%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I GLC+  R+ +A   L E  GK+  P  +  +  +  YCK G    A  +   M
Sbjct: 531 TYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEM 590

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K G +    +YN LI GL     + E     ++M   G+ P+  TY+ +        ++
Sbjct: 591 EKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKL 650

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGY---CQIGNVEE-------------------- 221
             A  ++ ++L KG  P+I T+ +LI  +   C  G  +E                    
Sbjct: 651 KDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMF 710

Query: 222 -----------GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
                        +L E  L +   L    Y  L+  +CK G++D+A  +L++M      
Sbjct: 711 NELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYS 770

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            D  ++  +I  L K+   H A +    M
Sbjct: 771 FDPASFMPVIDELGKRGSKHAADEFAERM 799


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 230/467 (49%), Gaps = 5/467 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV+T ++++  LCQ  R+  A   L E A K   P  V+   I+S  C LG  + A  + 
Sbjct: 168 NVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVL 227

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
                    P A SYN +I  LC    M+E      DM   G++P+ ITY+ +   F   
Sbjct: 228 -----SAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKA 282

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  ++ +++I G  P++ T+T L+ G    G V + L + + M+++G+  + ++Y
Sbjct: 283 GELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSY 342

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+  +C  G +  A  +L +ME  G  P+  TYS LI G  K   +  AI ++N+M  
Sbjct: 343 NVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTR 402

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               PN   +  ++   C+K M  +A    D +++ NC  + V +N +I        +G 
Sbjct: 403 SGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGR 462

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ ++ ++      P+  T+N L++G  + G   DA +++  ++ HG+E S VTY T ++
Sbjct: 463 ALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVS 522

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+    +  +  +  M  + I P   T+T +I   CK+ +++ A  +L  M V+    
Sbjct: 523 GLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGR 582

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           + + Y  ++   C    L  A   L +M    + P + T+N+L+ G+
Sbjct: 583 NILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGV 629



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 109/460 (23%), Positives = 227/460 (49%), Gaps = 5/460 (1%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M K G+ P+ F+YN+L+  LC    +  A +  ++M   G  PD +TY  +      L +
Sbjct: 160 MRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGR 219

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A +V+       + P   +Y  +I   C+   ++E   +   M+ +G + NVI Y+ 
Sbjct: 220 VDEATEVLS-----AAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTT 274

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++++ CK+G +  A  +L  M   G  P++ T++ L+ GL    +VH A+ ++  M ++ 
Sbjct: 275 IVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEG 334

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +P++ ++  ++ GLC    +  A    + +    C  +   Y+ +IDG+ K G++  A+
Sbjct: 335 WAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAI 394

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            ++  +      P++V + +++  FCK      A  L+D + +    P+ VT+ T + + 
Sbjct: 395 SIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSL 454

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C    + R L +  EM      P   TY  ++ GL ++    +A+Q++ +M   G+    
Sbjct: 455 CNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSL 514

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TYNT++   C+ +  R+A   + +M +  ++P + T+  +I   C  G+++ A  +L +
Sbjct: 515 VTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGA 574

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +   N     + YT ++   C +  +  AM +  +M+ +G
Sbjct: 575 MNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEG 614



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 202/395 (51%), Gaps = 5/395 (1%)

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  P++ TY +L+   CQ   V    K+ + M ++G   + + Y  ++S++C  GR+DEA
Sbjct: 164 GVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEA 223

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             +L         P   +Y+ +I  LC++ ++ +   +  +M  + + PN   +  I+  
Sbjct: 224 TEVLS-----AAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNA 278

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
            C+   +  A      ++++ C  +V  +  ++ G    G + +A+ +++ ++ +  +PS
Sbjct: 279 FCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPS 338

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            V++N LI G C  G +  A  +L+ ++ HG  P+A TY+T ++ + + G++   +++  
Sbjct: 339 TVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWN 398

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           +M      P  V YT ++   CK+    +A  L++ M V    P+ +T+NT+IRS C C+
Sbjct: 399 DMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCR 458

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            + +A  + ++M  H   P   TYN L+ GL   G+  +A  +++ +Q H I L+ V Y 
Sbjct: 459 RVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYN 518

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           T++   C      +AM F  +M+ +G +     +T
Sbjct: 519 TVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFT 553



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 212/437 (48%), Gaps = 35/437 (8%)

Query: 56  VSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
           +S  P    + + VI  LC++ R+Q+    + +  G+   P+V++   I++ +CK G   
Sbjct: 227 LSAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELR 286

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
           +A  +   M+  G  P+  ++  L+ GL   G + +AL+    M   G  P  ++Y++L 
Sbjct: 287 MACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLI 346

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
           +G   +  + GA  V+  +   G  P+  TY+ LI G+ + G+++  + +   M   G K
Sbjct: 347 RGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCK 406

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            NV+ Y+ ++   CK    ++A  L+ +M      P+ VT++ LIR LC   +V +A+ +
Sbjct: 407 PNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGV 466

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           ++EM      PN                                      YN ++ G  +
Sbjct: 467 FHEMRRHGCPPNGRT-----------------------------------YNELLHGLFR 491

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            GN G+A+Q+  ++    I  S+VT+N+++ G C+     +A   +  + + G++P A T
Sbjct: 492 EGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFT 551

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           +T  ++AYC+EG ++    +L  M     G   + YT+++  LC Q KL++A+  L  M 
Sbjct: 552 FTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKML 611

Query: 476 VIGVTPDQITYNTIIRS 492
             G+ P+ +T+N ++R 
Sbjct: 612 YEGIYPNTVTWNVLVRG 628



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 166/353 (47%), Gaps = 5/353 (1%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+ ++ +   +     +   M   G++P++ TY++L+R LC+  +V  A ++ +EM 
Sbjct: 137 YNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMA 196

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +K   P+   +G I+  LC    + EA     + ++S        YN +I    +   + 
Sbjct: 197 TKGCPPDDVTYGTIVSALCTLGRVDEA-----TEVLSAAPPVAASYNAVILALCREFRMQ 251

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           E   +   ++ + + P+++T+ +++  FCK G++  A  +L  + + G  P+  T+T  +
Sbjct: 252 EVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALV 311

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
                +G +   L + + M  +   P+ V+Y V+I+GLC    L+ A  +L DM   G  
Sbjct: 312 GGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCF 371

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+  TY+T+I  F K  DL  A  + N M     +P    Y  ++   C       A+ L
Sbjct: 372 PNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESL 431

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           +  +   N     V + T+I++ C    V +A+  F +M   G   + R Y +
Sbjct: 432 IDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNE 484



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 25/298 (8%)

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           LYN +ID  ++   +G    +   + +  + P++ T+N L+   C+N +V  AR++LD +
Sbjct: 136 LYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEM 195

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G  P  VTY T ++A C  G +     +L      A  P   +Y  VI  LC+++++
Sbjct: 196 ATKGCPPDDVTYGTIVSALCTLGRVDEATEVLS-----AAPPVAASYNAVILALCREFRM 250

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           QE   ++ DM   G+ P+ ITY TI+ +FCK  +LR A  +L +M +    P  AT+  L
Sbjct: 251 QEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTAL 310

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           + GL  +G + +A  +   +     + + V+Y  +I+  C+ GD+  A +    M + G 
Sbjct: 311 VGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGC 370

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             + R Y+                     ++  F + GDL     +   M +SG  P+
Sbjct: 371 FPNARTYS--------------------TLIDGFSKAGDLDGAISIWNDMTRSGCKPN 408



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 138/279 (49%), Gaps = 7/279 (2%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNV--Y 64
           G +  A  V+  M++     + +TY++L+         D    +++D+  S    NV  Y
Sbjct: 353 GDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVY 412

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           TN + +   C++     A   + +   +   P+ V+ N ++   C       A G+F  M
Sbjct: 413 TNMVGV--FCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEM 470

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            ++G  P+  +YN L+HGL   G+  +AL+   +M  HG+E   +TY+ +  G   +   
Sbjct: 471 RRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMG 530

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A   + +++++G  PD  T+T +I  YC+ G V     +   M       N++ Y++L
Sbjct: 531 REAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTIL 590

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           ++ +C   ++++A+  L +M   G+ P+ VT+++L+RG+
Sbjct: 591 MAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGV 629


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 153/603 (25%), Positives = 275/603 (45%), Gaps = 35/603 (5%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I GL + S   +A+ FL       + P+VV+   +++ + K       K +  +M+  G
Sbjct: 277 MISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEG 336

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG-- 186
            +P    +N L+H  C A     A +  N M   G  P  + Y+I         ++    
Sbjct: 337 CNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPE 396

Query: 187 ----AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               A KV +++L+     + +         C +G  E+  ++ + M+ +GF  +   Y+
Sbjct: 397 LLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYT 456

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +++ +C++ R+D+A  L  EM+ VG+ PD+ TY+ILI   CK   + +A   ++EM S 
Sbjct: 457 KVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSA 516

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             SPN   + A+L    + + + +A   F  ++   C  + + Y+ +IDG  K G I +A
Sbjct: 517 GCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKA 576

Query: 363 VQLYRQLI----------------EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
            ++Y +LI                   ISP++VT+ +L+ G CK  KV+DA  LLD +  
Sbjct: 577 CEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLA 636

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G EP+ + Y   ++ +C+ G I     +   M      P+  TYT +I  + K  +L  
Sbjct: 637 AGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDL 696

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A+++L  M      P+ +TY  ++   CK  +  KA  LL+ M      P   TY  LID
Sbjct: 697 AMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALID 756

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE----- 581
           GL   G +     L + ++    +   V Y  +I   CA G +  A     +M +     
Sbjct: 757 GLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPK 816

Query: 582 --KGFEISIRDYTKSFFCM------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             +G+  +++ ++K F         M S+   P   +  +++ +F + G L +  EL   
Sbjct: 817 YLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKE 876

Query: 634 MIK 636
           M++
Sbjct: 877 MME 879



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/518 (24%), Positives = 238/518 (45%), Gaps = 24/518 (4%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           G    A  ++ +M          TY    + L   +  D  + L+ ++K      +VYT 
Sbjct: 431 GKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTY 490

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+ID  C+   ++ A  +  E       P+VV+  A++  Y K      A  +F  M+ 
Sbjct: 491 TILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVG 550

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALE-----------FTNDMGRHG-----VEPDAIT 170
              +P+A +Y+ LI GLC AG +++A E             +D    G     + P+ +T
Sbjct: 551 DACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVT 610

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y  L  G     ++S A  ++  +L  G +P+ + Y  L+ G+C++G ++   ++   M 
Sbjct: 611 YGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMT 670

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
             G+  +V  Y+ L+  M K GR+D A+ +L +M      P++VTY+ ++ GLCK  +  
Sbjct: 671 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETE 730

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           KA+ L + M  K  SPN   + A++ GL +   +      F  +    C  + V Y I+I
Sbjct: 731 KALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILI 790

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           +     G + +A  L  ++ +      +  + + + GF K  +   +  LL+ ++ H   
Sbjct: 791 NHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK--RFLASLGLLEEMESHDTA 848

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEM---ETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           P A  Y   ++++ + G ++  L L +EM    +     +   +T +I+ LC   +++EA
Sbjct: 849 PIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEA 908

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           V L  +M   G+ PD   +  +++   +     +A QL
Sbjct: 909 VALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 134/581 (23%), Positives = 236/581 (40%), Gaps = 89/581 (15%)

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
           LN ++ R C  G    A      +  +G  P A +YN L+  L  AG +E A     +M 
Sbjct: 172 LNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMS 231

Query: 161 RHGVEPDAITYSILAK----------GFHLLSQ-------------ISG---------AW 188
             G   D  T    A+             LL +             ISG         A 
Sbjct: 232 ASGFCMDRSTVGSFAQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAM 291

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
             + ++      P++VTY  L+ G+ +   +    ++  +M+++G   +   ++ L+ + 
Sbjct: 292 SFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTY 351

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILI---------------------------- 280
           C +     A  L   M   G  P  V Y+I I                            
Sbjct: 352 CNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVA 411

Query: 281 -------------RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
                        R LC   K  KA Q+  EM  K   P++  +  ++  LC+ + + +A
Sbjct: 412 SCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKA 471

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
            + F  +       DV  Y I+ID + K G I +A   + ++     SP++VT+ +L++ 
Sbjct: 472 FLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHA 531

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM-------- 439
           + K+ ++  A  +   +      P+A+TY+  ++  C+ G IQ+   +  ++        
Sbjct: 532 YLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIE 591

Query: 440 --------ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
                   +T  I P  VTY  ++ GLCK  K+ +A  LL+ M   G  P+QI Y+ ++ 
Sbjct: 592 SDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVD 651

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            FCK  ++  A ++  +M      P+  TY  LID +  +G L  A  +L  + + + + 
Sbjct: 652 GFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNP 711

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             V YT ++   C  G+  KA+     M +KG   ++  YT
Sbjct: 712 NVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYT 752



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 128/528 (24%), Positives = 226/528 (42%), Gaps = 47/528 (8%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N+L+   C+ G   EALE    +   G  P A+TY+ L +      Q+  A++V +++  
Sbjct: 173 NVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSA 232

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
            G   D  T        C+ G   + L L E    + FKL+ +  + ++S + ++   +E
Sbjct: 233 SGFCMDRSTVGSFAQALCKEGRWGDALDLLE---REDFKLDTVLCTQMISGLMEASLFNE 289

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+  L+ M      P++VTY  L+ G  K+ ++    ++ N M ++  +P+     +++ 
Sbjct: 290 AMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVH 349

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID---GYVKLGNIGEAVQLYRQLIEKR 373
             C  E    A   F+ +    C    V+YNI I    G  +L N  E + L  ++ E+ 
Sbjct: 350 TYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPN-PELLDLAEKVYEEM 408

Query: 374 ISPSIV--TFNSLIYG--FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           +  S V    N+  +    C  GK   A +++  +   G  P A TYT  +   C+   +
Sbjct: 409 LVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRV 468

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
            +   L QEM+   + P   TYT++I   CK   +++A    ++M   G +P+ +TY  +
Sbjct: 469 DKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTAL 528

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA------------ 537
           + ++ K K L +A  + ++M      P + TY+ LIDGLC  G+++ A            
Sbjct: 529 LHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSD 588

Query: 538 ----DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
               D          IS   V Y  ++   C    V  A      M+  G E        
Sbjct: 589 NIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCE-------- 640

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                       P+Q + + ++  F + G++ S  E+   M K G LP
Sbjct: 641 ------------PNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLP 676



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 38/290 (13%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+T + +ID + +  RL  A+  L +       P+VV+  A++   CK G  E A  L 
Sbjct: 677 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLL 736

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL------- 174
            LM K G  P+  +Y  LI GL  AG ++  LE    M   G  P+ +TY IL       
Sbjct: 737 SLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAA 796

Query: 175 ------------AKGFHLLSQISGAWKVIQ--------------KLLIKGSDPDIVTYTV 208
                        K  H    + G    +Q              ++    + P    Y +
Sbjct: 797 GLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGM 856

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIA---YSVLLSSMCKSGRIDEALGLLYEME 265
           LI  + + G +E  L+L + M+     LN+ +   ++ L+ ++C S +++EA+ L  EM 
Sbjct: 857 LIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMR 916

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS--PNSFAHGA 313
             G+ PDL  +  L++GL +++K ++A+QL   +C + ++   N F  G 
Sbjct: 917 RRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGVNWEGNKFCDGG 966



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 114/295 (38%), Gaps = 44/295 (14%)

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           L N+++      G  GEA++   +L +    PS VT+N+L+      G+V  A R+   +
Sbjct: 171 LLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEM 230

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGN--------------------------------IQRL 432
              G      T  +F  A C+EG                                     
Sbjct: 231 SASGFCMDRSTVGSFAQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEA 290

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           ++ L  M   +  P  VTY  ++ G  K+ +L    +++  M   G  P    +N+++ +
Sbjct: 291 MSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHT 350

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH----- 547
           +C  +D   A++L N+M      P    YNI I  +C   +L N +  L+ L E      
Sbjct: 351 YCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPE--LLDLAEKVYEEM 408

Query: 548 ---NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC 597
              +  L K+      +  C  G   KA     +M+ KGF      YTK  +F C
Sbjct: 409 LVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLC 463


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 256/536 (47%), Gaps = 16/536 (2%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S +I  LC   R  DA+  L + AG   G  VV  NA+++ YC++G  E A+ L   +  
Sbjct: 56  SALIRSLCVAGRTADAVRAL-DAAGNAAG--VVDYNAMVAGYCRVGQVEAARRLAAAV-- 110

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + P+A++Y  ++ GLC  G + +AL   ++M      P    Y ++ +        S 
Sbjct: 111 -PVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSS 169

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +V++ L  KGS  D     ++I   C  G V+EGL++   +   G + ++++Y+ +L 
Sbjct: 170 ALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLK 229

Query: 247 SMCKSGRIDEALGLLYEMEAV----------GLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +C + R  +   L+ EM  V          G  PD+  Y+ +I G+CK+     A ++ 
Sbjct: 230 GLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEIL 289

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           + M S  + PN   +  +L G+C  +   +A      +   NC  D V +NI++D + + 
Sbjct: 290 SRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQN 349

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G +   ++L  Q++E    P ++T+ ++I GFCK G + +A  LL  +   G +P+ ++Y
Sbjct: 350 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISY 409

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           T  +   C          L+  M  +   P  VT+  +I  LCK+  +++A++LL+ M V
Sbjct: 410 TIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLV 469

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G  PD I+Y+T+I    K     +A +LLN M    + P   TY+ +   L   G +  
Sbjct: 470 NGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDK 529

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
              +  ++Q+  I    V Y  +I + C   +   A+ F   MV  G   +   YT
Sbjct: 530 VIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYT 585



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 235/495 (47%), Gaps = 10/495 (2%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N YT   V+ GLC + R+ DA+  L E   +   P     + I+   C+ G    A  
Sbjct: 113 PPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALR 172

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF- 178
           +   +   G   D  + N++I+ +C  G ++E LE    +   G E D ++Y+ + KG  
Sbjct: 173 VLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLC 232

Query: 179 ---------HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
                     L+ ++    + + ++   G  PDI  Y  +I G C+ G+ E   ++   M
Sbjct: 233 AAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRM 292

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
            S G K NV+ Y+ +L  +C + R ++A  LL EM       D VT++IL+   C+   V
Sbjct: 293 PSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLV 352

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            + I+L  +M      P+   +  ++ G C++ +I EA M   ++    C  + + Y I+
Sbjct: 353 DRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIV 412

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           + G        +A +L  ++I++   P+ VTFN++I   CK G V  A  LL  + ++G 
Sbjct: 413 LKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGC 472

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P  ++Y+T ++   + G  +  L LL  M  K I P  +TY+ +   L ++ ++ + +Q
Sbjct: 473 NPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQ 532

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           + +++    +  D + YN +I S CK ++   A   L  M  +   P  +TY  LI GL 
Sbjct: 533 MFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLA 592

Query: 530 VNGDLKNADCLLVSL 544
             G L  A  LL  L
Sbjct: 593 SEGLLCEAQDLLSEL 607



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 217/463 (46%), Gaps = 28/463 (6%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           YN ++ G C  G +E A      +    V P+A TY  + +G     +I+ A  V+ ++ 
Sbjct: 87  YNAMVAGYCRVGQVEAARRLAAAVP---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMT 143

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
            +   P    Y V+I   C+ G     L++ E + ++G  L+    +++++++C  G +D
Sbjct: 144 SRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVD 203

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           E L +L ++   G + D+V+Y+ +++GLC   +     +L +EM                
Sbjct: 204 EGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVK-------------- 249

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
                   + EA      +    C  D+ +Y  +IDG  K G+   A ++  ++    + 
Sbjct: 250 --------VHEA---LSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLK 298

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P++V +N+++ G C   +   A  LL  +         VT+   ++ +C+ G + R++ L
Sbjct: 299 PNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIEL 358

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           L++M      P  +TYT VI G CK+  + EAV LL++M   G  P+ I+Y  +++  C 
Sbjct: 359 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCS 418

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
            +    A +L+++M      P   T+N +I+ LC  G ++ A  LL  +  +  +   ++
Sbjct: 419 TERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLIS 478

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
           Y+T+I      G   +A+     M+ KG   ++  Y+   F +
Sbjct: 479 YSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFAL 521



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 197/463 (42%), Gaps = 33/463 (7%)

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
            ++ L   G+   +V Y  ++ GYC++G VE     R +  +     N   Y  ++  +C
Sbjct: 71  AVRALDAAGNAAGVVDYNAMVAGYCRVGQVEAA---RRLAAAVPVPPNAYTYFPVVRGLC 127

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
             GRI +AL +L EM +    P    Y ++I   C+      A+++   + +K  + ++ 
Sbjct: 128 GRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTG 187

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY--- 366
               ++  +C++  + E       L +  C  D+V YN ++ G       G+  +L    
Sbjct: 188 NCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEM 247

Query: 367 -------RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
                   Q+ +   +P I  + ++I G CK G    A  +L  +  +GL+P+ V Y T 
Sbjct: 248 VKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTV 307

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +   C     ++   LL EM  K      VT+ +++   C+   +   ++LLE M   G 
Sbjct: 308 LKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGC 367

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD ITY T+I  FCK   + +A  LL  M     +P + +Y I++ GLC      +A+ 
Sbjct: 368 MPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEE 427

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           L+  + +       V + TII   C +G V +A+    QM                    
Sbjct: 428 LMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQM-------------------- 467

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           L NG  PD      ++    + G      EL  VMI  G+ P+
Sbjct: 468 LVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 510



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 189/399 (47%), Gaps = 10/399 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQET----------AGKEFGPSVVSLNAIMSRYCKL 111
           ++ + + V+ GLC   R  D    + E           A     P +     I+   CK 
Sbjct: 220 DIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKE 279

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G  EVA  +   M  YGL P+   YN ++ G+C A   E+A E   +M +     D +T+
Sbjct: 280 GHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTF 339

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           +IL   F     +    ++++++L  G  PD++TYT +I G+C+ G ++E + L + M S
Sbjct: 340 NILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPS 399

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
            G K N I+Y+++L  +C + R  +A  L+  M   G  P+ VT++ +I  LCK+  V +
Sbjct: 400 CGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQ 459

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           AI+L  +M     +P+  ++  ++ GL +     EA    + +I      +V+ Y+ M  
Sbjct: 460 AIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAF 519

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
              + G I + +Q++  + +  I    V +N++I   CK  +   A   L  +  +G  P
Sbjct: 520 ALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMP 579

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           +  TYT  +     EG +     LL E+ ++     H+T
Sbjct: 580 NESTYTALIKGLASEGLLCEAQDLLSELCSRRAVRKHLT 618



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 161/321 (50%), Gaps = 5/321 (1%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVYTNSIVIDGL 73
           ++++M    LK ++  YN++L  +   D  W+    L  ++     P +  T +I++D  
Sbjct: 288 ILSRMPSYGLKPNVVCYNTVLKGICSAD-RWEKAEELLTEMYQKNCPLDDVTFNILVDFF 346

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           CQ   +   I  L++       P V++   +++ +CK G  + A  L   M   G  P+ 
Sbjct: 347 CQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNT 406

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
            SY I++ GLC      +A E  + M + G  P+ +T++ +         +  A +++++
Sbjct: 407 ISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQ 466

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +L+ G +PD+++Y+ +I G  + G  EE L+L  VM+++G   NVI YS +  ++ + GR
Sbjct: 467 MLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGR 526

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           ID+ + +   ++   ++ D V Y+ +I  LCK+ +   AI     M S    PN   + A
Sbjct: 527 IDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTA 586

Query: 314 ILLGLCEKEMITEARMYFDSL 334
           ++ GL  + ++ EA+     L
Sbjct: 587 LIKGLASEGLLCEAQDLLSEL 607


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 155/675 (22%), Positives = 300/675 (44%), Gaps = 54/675 (8%)

Query: 18  VIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           V+  M++   + +   Y +L+     + H+D+M  L+  ++       V+  + +I G  
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFA 214

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           ++ R+  A+  L E         +V  N  +  + K+G  ++A   F  +   GL PD  
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +Y  +I  LC A  ++EA+E    + ++   P    Y+ +  G+    +   A+ ++++ 
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             KGS P ++ Y  ++    ++G V+E LK+ E M  +    N+  Y++L+  +C++G++
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKL 393

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D A  L   M+  GL P++ T +I++  LCK  K+ +A  ++ EM  K  +P+     ++
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + GL +   + +A   ++ ++ S+C  + ++Y  +I  +   G   +  ++Y+ +I +  
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF--------------- 419
           SP +   N+ +    K G+    R + + IK     P A +Y+                 
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573

Query: 420 --------------------MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
                               ++ +C+ G + +   LL+EM+TK   PT VTY  VI GL 
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K  +L EA  L E+     +  + + Y+++I  F K   + +A+ +L ++    L P   
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           T+N L+D L    ++  A     S++E   +  +V Y  +I   C     +KA  F+ +M
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753

Query: 580 VEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
            ++G + S   YT                + F    +NG  PD      M+     G   
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813

Query: 625 GSVFELAAVMIKSGL 639
              F L     + GL
Sbjct: 814 MDAFSLFEETRRRGL 828



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 159/671 (23%), Positives = 299/671 (44%), Gaps = 59/671 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRN 62
           +++ G V  A+ ++ +MK   L   I  YN  + +   +   D+ W  + +I+ +    +
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272

Query: 63  VYTNSIVIDGLCQQSRLQDAI-----------------------------------LFLQ 87
             T + +I  LC+ +RL +A+                                     L+
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
               K   PSV++ N I++   K+G  + A  +F  M K    P+  +YNILI  LC AG
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAG 391

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            ++ A E  + M + G+ P+  T +I+        ++  A  + +++  K   PD +T+ 
Sbjct: 392 KLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 451

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            LI G  ++G V++  K+ E ML    + N I Y+ L+ +    GR ++   +  +M   
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
              PDL   +  +  + K  +  K   ++ E+ ++R  P++ ++  ++ GL +     E 
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F S+    C+ D   YNI+IDG+ K G + +A QL  ++  K   P++VT+ S+I G
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
             K  ++ +A  L +  K   +E + V Y++ ++ + + G I     +L+E+  K + P 
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             T+  ++  L K  ++ EA+   + M  +  TP+Q+TY  +I   CK +   KAF    
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M    ++P++ +Y  +I GL   G++  A  L    + +        Y  +I+      
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL---S 808

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           + ++AM  F                 S F      G P   + C V+L   H+   L   
Sbjct: 809 NGNRAMDAF-----------------SLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851

Query: 628 FELAAVMIKSG 638
             + AV+ ++G
Sbjct: 852 AIVGAVLRETG 862



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/590 (24%), Positives = 268/590 (45%), Gaps = 39/590 (6%)

Query: 32  QTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
           ++YNSLL  +   R+ D +  +  ++ V+    +V T   ++ G  + ++L++    +Q 
Sbjct: 99  ESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQM 158

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
               +F P+  +   ++  +  +  +++   LF  M + G  P    +  LI G    G 
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT- 207
           ++ AL   ++M    ++ D + Y++    F  + ++  AWK   ++   G  PD VTYT 
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278

Query: 208 ----------------------------------VLICGYCQIGNVEEGLKLREVMLSQG 233
                                              +I GY   G  +E   L E   ++G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              +VIAY+ +L+ + K G++DEAL +  EM+     P+L TY+ILI  LC+  K+  A 
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAF 397

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           +L + M    + PN      ++  LC+ + + EA   F+ +    C  D + +  +IDG 
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K+G + +A ++Y ++++     + + + SLI  F  +G+  D  ++   +      P  
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
               T+M+   + G  ++  A+ +E++ +   P   +Y+++I GL K     E  +L   
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G   D   YN +I  FCKC  + KA+QLL +M     EPT  TY  +IDGL     
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L  A  L    +   I L  V Y+++I      G + +A     ++++KG
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/499 (24%), Positives = 225/499 (45%), Gaps = 36/499 (7%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  P   +   ++ G   A  + E  +    M +    P    Y+ L   F  ++     
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             + Q++   G +P +  +T LI G+ + G V+  L L + M S     +++ Y+V + S
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
             K G++D A    +E+EA GLKPD VTY+ +I  LCK +++ +A++++  +   R  P 
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           ++A+  +++G        EA    +       I  V+ YN ++    K+G + EA++++ 
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++ +K  +P++ T+N LI   C+ GK+  A  L D+++  GL P+  T    ++  C+  
Sbjct: 368 EM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            +    A+ +EM+ K   P  +T+  +I GL K  ++ +A ++ E M       + I Y 
Sbjct: 427 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 486

Query: 488 TIIRSF--------------------C---------------KCKDLRKAFQLLNQMWLH 512
           ++I++F                    C               K  +  K   +  ++   
Sbjct: 487 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 546

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
              P + +Y+ILI GL   G       L  S++E    L   AY  +I   C  G V+KA
Sbjct: 547 RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606

Query: 573 MTFFCQMVEKGFEISIRDY 591
                +M  KGFE ++  Y
Sbjct: 607 YQLLEEMKTKGFEPTVVTY 625


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 259/526 (49%), Gaps = 4/526 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N    + VIDG  ++  +  A     E   +   P + + N +++  CK    + A+ + 
Sbjct: 215 NAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAIL 274

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G+ PD ++YN LI+G    G  +EA+  +  M   G+ PD +T + L       
Sbjct: 275 RQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKH 334

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  V   + +KG   DI +Y +++ GY   G + +  +L  +MLS G   +   +
Sbjct: 335 GKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIF 394

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+ +  K G +D A  +  EM   G++PD+VTYS +I  LC+  K+  A++ +N+M  
Sbjct: 395 NVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMID 454

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + ++P+   +  ++ G C    + +A+     ++      D+  +N +I+   KLG + +
Sbjct: 455 QGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMD 514

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  ++   I   + P+++ +N+L+ G+C  GK+ +A R+ D +   G++P+ V Y T +N
Sbjct: 515 AQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVN 574

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC+ G I   L+L +E+  K I P+   Y +++ GL +  +   A     +M   G+  
Sbjct: 575 GYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAM 634

Query: 482 DQITYNTIIRSFCK--CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           D+ TY+ ++    K  C D  +A  L  ++   N++    T NI+I G+     ++ A  
Sbjct: 635 DRYTYSIVLGGLFKNSCSD--EAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKD 692

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           L  S+    +  + V Y+ ++     EG V +A   F  M   G E
Sbjct: 693 LFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCE 738



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/600 (23%), Positives = 281/600 (46%), Gaps = 19/600 (3%)

Query: 67  SIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           S ++ GLC+  R  +A+ + L         P V S   ++   C    +  A  L  +M 
Sbjct: 147 SNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMA 206

Query: 126 KYGL--HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           + G    P+A +YN +I G    G + +A +  N+M + G+ PD  TY+ +         
Sbjct: 207 EGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARA 266

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A  ++++++ KG  PD  TY  LI GY   G  +E +++ + M SQG   +V+  + 
Sbjct: 267 MDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNS 326

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L++S+CK G+I +A  +   M   G K D+ +Y I++ G   +  +    +L+N M S  
Sbjct: 327 LMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDG 386

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I+P+S     ++    +  M+  A + F+ +       DVV Y+ +I    ++G + +AV
Sbjct: 387 IAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAV 446

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           + + Q+I++ ++PSI T++ LI GFC +G +  A+ L+  +   G+ P    +   +N  
Sbjct: 447 EKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNL 506

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ G +     +     +  + P  + Y  ++ G C   K++ A+++ + M   G+ P+ 
Sbjct: 507 CKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNV 566

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           + Y T++  +CK   + +   L  ++    ++P++  YNI++ GL   G    A      
Sbjct: 567 VVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHE 626

Query: 544 LQEHNISLTKVAYTTII----KAHCAEG-----------DVHKAMTFFCQMVEKGFEISI 588
           + E  I++ +  Y+ ++    K  C++            +V   +T    M+   F+I  
Sbjct: 627 MTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRR 686

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL-LPDKFLIN 647
            +  K  F  +  +G  P      +M+    + G +    ++ + M  +G   P+  L+N
Sbjct: 687 VEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLN 746



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 234/477 (49%), Gaps = 5/477 (1%)

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKG 177
             F  +LK GL  D    + L+ GLC A    EAL+   + M   G  PD  +Y I+ K 
Sbjct: 129 AFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKS 188

Query: 178 FHLLSQISGAWKVIQKLLIKGSD---PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
                + SG    + +++ +G     P+ V Y  +I G+ + G+V +   L   M+ +G 
Sbjct: 189 L-CSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGI 247

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             ++  Y+ +++++CK+  +D+A  +L +M   G+ PD  TY+ LI G     +  +A++
Sbjct: 248 SPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVR 307

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           +  +M S+ I P+     +++  LC+   I +AR  FDS+ M     D+  Y IM++GY 
Sbjct: 308 VSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYA 367

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
             G + +  +L+  ++   I+P    FN LI  + K G +  A  + + ++  G+EP  V
Sbjct: 368 TKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVV 427

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TY+T + A C  G +   +    +M  + + P+  TY  +I+G C    L +A  L+  M
Sbjct: 428 TYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQM 487

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+ PD   +N II + CK   +  A  + +      L P    YN L+DG C+ G +
Sbjct: 488 MNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKM 547

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           +NA  +   +    I    V Y T++  +C  G + + ++ F +++ KG + S   Y
Sbjct: 548 ENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLY 604



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 236/509 (46%), Gaps = 4/509 (0%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSE 58
           L + YS TG   +AV V  KM    +   + T NSL+ +L +H  I    D++D + +  
Sbjct: 292 LIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKG 351

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              ++++  I+++G   +  L D              P     N ++  Y K G  + A 
Sbjct: 352 QKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRAT 411

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M + G+ PD  +Y+ +I  LC  G M++A+E  N M   GV P   TY  L +GF
Sbjct: 412 IIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGF 471

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +  A  ++ +++ KG  PDI  +  +I   C++G V +   + +  +S G   NV
Sbjct: 472 CTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNV 531

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y+ L+   C  G+++ AL +   M + G++P++V Y  L+ G CK  ++ + + L+ E
Sbjct: 532 MVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFRE 591

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           +  K I P++  +  IL GL +      A++ F  +  S    D   Y+I++ G  K   
Sbjct: 592 ILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSC 651

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             EA+ L+++L    +   I T N +I G  +  +V +A+ L  +I   GL PS VTY+ 
Sbjct: 652 SDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSI 711

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAI-GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
            M    +EG ++    +   ME      P       V++ L ++ ++  A   L  +   
Sbjct: 712 MMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDER 771

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             + D  T   +I  F      R+  + L
Sbjct: 772 SFSLDHSTTTLLIDLFSSKGTCREHIRFL 800



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 187/416 (44%), Gaps = 31/416 (7%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ-LYNEM 299
           Y +L+    ++ R    L    ++   GL  D +  S L+RGLC+  +  +A+  L + M
Sbjct: 111 YGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRM 170

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEA----RMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
                 P+ F++  +L  LC      +A    RM  +   +  C+ + V YN +IDG+ K
Sbjct: 171 PHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAV--CLPNAVAYNTVIDGFFK 228

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G++ +A  L+ +++++ ISP + T+N ++   CK   +  A  +L  +   G+ P   T
Sbjct: 229 EGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWT 288

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y + +  Y   G  +  + + ++M ++ I P  VT   ++  LCK  K+++A  + + M 
Sbjct: 289 YNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMA 348

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
           + G   D  +Y  ++  +     L    +L N M    + P S  +N+LI      G L 
Sbjct: 349 MKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLD 408

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF 595
            A  +   ++E  +    V Y+T+I A C  G +  A+  F QM+++G   SI  Y    
Sbjct: 409 RATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTY---- 464

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD----KFLIN 647
                             ++  F   GDL    +L   M+  G+ PD     F+IN
Sbjct: 465 ----------------HFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIIN 504


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 228/449 (50%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P    +  L   L      +  +  +  M   G+  D ++ +IL   F  L  +   + V
Sbjct: 89  PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSV 148

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           + K++  G +P+++T++ LI G+C  G +   ++L +VM+++G+K NV +YS+++  +C+
Sbjct: 149 LGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCR 208

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G+  E + LL  M+ VG +PD+V Y+ ++  LCK   V++A+ ++ +M    I P    
Sbjct: 209 VGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVT 268

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + +++ GL       EA    + +   N + D+V ++++ID   K G + EA  + + + 
Sbjct: 269 YTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMT 328

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           E  + P + T+N+L+ G+C   +V +AR++ + +   G  P   +++  +N YC+   I 
Sbjct: 329 EMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRID 388

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L  EM  + + P  V+Y  +I GLC+  +  EA +L +DM+  G  P+ +TY+ ++
Sbjct: 389 EAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILL 448

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
               K   L +A  L   M    L+P   TYNI+IDG+C  G  K+A  L   L    + 
Sbjct: 449 DCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQ 508

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
                 T  I   C  G + +A   F QM
Sbjct: 509 PNNWVCTPTIDGVCKGGLLDEAHKAFRQM 537



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 225/435 (51%), Gaps = 9/435 (2%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           V+SL  +++ +C+L   +    +   ++K GL P+  +++ LI+G CI G +  A+E  +
Sbjct: 126 VLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFD 185

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            M   G +P+  +YSI+ KG   + + +   K+++ + + G +PD+V Y  ++   C+  
Sbjct: 186 VMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDR 245

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            V E + +   M   G    V+ Y+ L+  +   GR  EA GLL EM+   + PDLV +S
Sbjct: 246 LVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFS 305

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           +LI  +CK+ +V +A  +   M    + P+   +  ++ G C +  + EAR  F+ +I  
Sbjct: 306 VLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISK 365

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
             + DV  ++I+++GY K   I EA QL+ ++  + + P  V++N+LI G C+  +  +A
Sbjct: 366 GRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEA 425

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             L   +  +G  P+ VTY+  ++   ++G + + + L + ME   + P  VTY ++I G
Sbjct: 426 EELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDG 485

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           +CK  K ++A +L  ++ V G+ P+       I   CK   L +A +   QM   +  P 
Sbjct: 486 MCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPA 545

Query: 518 SATYNILIDGLCVNG 532
                      C+NG
Sbjct: 546 QG---------CING 551



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 235/472 (49%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           + DA+            PS+V    + S   ++   +    L   M   G+  D  S  I
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI+  C    ++        + + G+EP+ IT+S L  GF +  +I  A ++   ++ +G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P++ +Y+++I G C++G   E +KL E M   G + +V+ Y+ ++  +CK   ++EA+
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +  +M+  G+ P +VTY+ LI GL    +  +A  L NEM    I P+  A   ++  +
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++  ++EAR+   ++       DV  YN +++GY     + EA +++  +I K   P +
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            +F+ L+ G+CK  ++ +A++L D +   GL P  V+Y T ++  C+         L ++
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M +    P  VTY++++  L KQ  L +A+ L   M   G+ PD +TYN +I   CK   
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
            + A +L  ++ +  L+P +      IDG+C  G L  A      +++ + S
Sbjct: 492 FKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCS 543



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 214/438 (48%)

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           ++ +AL   N M      P  + +  L      +        + +++ + G   D+++ T
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +LI  +C++ +V+ G  +   ++  G + NVI +S L++  C  G+I  A+ L   M A 
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G KP++ +YSI+I+GLC+  K  + I+L   M      P+   +  I+  LC+  ++ EA
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F  +  +  +  VV Y  +I G   LG   EA  L  ++    I P +V F+ LI  
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDI 310

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G+V++AR +L T+   G+EP   TY T MN YC    +     + + M +K   P 
Sbjct: 311 MCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPD 370

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             ++++++ G CK  ++ EA QL ++M   G+ PD ++YNT+I   C+ +   +A +L  
Sbjct: 371 VFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFK 430

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M  +   P   TY+IL+D L   G L  A  L  +++   +    V Y  +I   C  G
Sbjct: 431 DMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYG 490

Query: 568 DVHKAMTFFCQMVEKGFE 585
               A   F ++  KG +
Sbjct: 491 KFKDARELFAELSVKGLQ 508



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 202/398 (50%), Gaps = 3/398 (0%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           V+ K+ +L L+ ++ T+++L+             +L+D +       NV++ SI+I GLC
Sbjct: 148 VLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLC 207

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +  +  + I  L+        P VV  N I+ R CK      A  +FC M   G+ P   
Sbjct: 208 RVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVV 267

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +Y  LIHGL   G  +EA    N+M    + PD + +S+L        ++S A  +++ +
Sbjct: 268 TYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 327

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
              G +PD+ TY  L+ GYC    V E  K+ EVM+S+G   +V ++S+L++  CK+ RI
Sbjct: 328 TEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRI 387

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           DEA  L  EM   GL PD V+Y+ LI GLC+  +  +A +L+ +M S    PN   +  +
Sbjct: 388 DEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSIL 447

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           L  L ++  + +A   F ++  S    D+V YNIMIDG  K G   +A +L+ +L  K +
Sbjct: 448 LDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGL 507

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
            P+       I G CK G + +A +    ++     P+
Sbjct: 508 QPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPA 545



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 224/480 (46%), Gaps = 15/480 (3%)

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            I+ A      ++     P IV +  L     ++ + +  + L + M   G   +V++ +
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L++  C+   +D    +L ++  +GL+P+++T+S LI G C + K+ +AI+L++ M ++
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              PN  ++  I+ GLC     TE     + + +  C  DVV+YN ++D   K   + EA
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           V ++ ++    I P++VT+ SLI+G    G+  +A  LL+ +K   + P  V ++  ++ 
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDI 310

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+EG +     +L+ M    + P   TY  ++ G C + ++ EA ++ E M   G  PD
Sbjct: 311 MCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPD 370

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             +++ ++  +CK K + +A QL ++M    L P + +YN LI GLC       A+ L  
Sbjct: 371 VFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFK 430

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------- 592
            +  +      V Y+ ++     +G + +AM  F  M   G +  +  Y           
Sbjct: 431 DMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYG 490

Query: 593 -----KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                +  F  +   G  P+  +C   +    +GG L    +    M K    P +  IN
Sbjct: 491 KFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCIN 550



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 196/399 (49%), Gaps = 9/399 (2%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           IK+   P NV T S +I+G C + ++  AI        + + P+V S + I+   C++G 
Sbjct: 153 IKLGLEP-NVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGK 211

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
                 L   M   G  PD   YN ++  LC    + EA+     M   G+ P  +TY+ 
Sbjct: 212 TTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTS 271

Query: 174 LAKGFHLLSQISGAWKVIQKLL--IKGSD--PDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           L  G   L    G WK    LL  +KG +  PD+V ++VLI   C+ G V E   + + M
Sbjct: 272 LIHGLRNL----GRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 327

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
              G + +V  Y+ L++  C    + EA  +   M + G  PD+ ++SIL+ G CK  ++
Sbjct: 328 TEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRI 387

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A QL++EM  + + P++ ++  ++ GLC+     EA   F  +  +    ++V Y+I+
Sbjct: 388 DEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSIL 447

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           +D   K G + +A+ L+R +    + P +VT+N +I G CK GK  DAR L   + + GL
Sbjct: 448 LDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGL 507

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           +P+    T  ++  C+ G +       ++ME     P  
Sbjct: 508 QPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQ 546



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 160/299 (53%), Gaps = 9/299 (3%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVYTN 66
           +V++AV +  KMK   +  ++ TY SL++ LR+    W     L +++K      ++   
Sbjct: 246 LVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLG-RWKEAFGLLNEMKGGNIMPDLVAF 304

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S++ID +C++  + +A + L+        P V + N +M+ YC       A+ +F +M+ 
Sbjct: 305 SVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMIS 364

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD FS++IL++G C A  ++EA +  ++M   G+ PD ++Y+ L  G     +   
Sbjct: 365 KGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLE 424

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A ++ + +   G  P++VTY++L+    + G +++ + L   M + G K +++ Y++++ 
Sbjct: 425 AEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMID 484

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ---DKVHKAI-QLYNEMCS 301
            MCK G+  +A  L  E+   GL+P+    +  I G+CK    D+ HKA  Q+  + CS
Sbjct: 485 GMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCS 543



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 110/220 (50%), Gaps = 3/220 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL--YNLRHTDIMWDLYDDIKVSETP-RNVY 64
           + G V +A  ++  M E+ ++  + TYN+L+  Y LR   +      ++ +S+    +V+
Sbjct: 313 KEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVF 372

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           + SI+++G C+  R+ +A     E   +   P  VS N ++S  C+      A+ LF  M
Sbjct: 373 SFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDM 432

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G  P+  +Y+IL+  L   G +++A+     M   G++PD +TY+I+  G     + 
Sbjct: 433 HSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKF 492

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
             A ++  +L +KG  P+    T  I G C+ G ++E  K
Sbjct: 493 KDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHK 532


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 158/565 (27%), Positives = 266/565 (47%), Gaps = 7/565 (1%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTN 66
           G    A+ V+ +M+E  +K   Q Y+S +    N R  +   +L   +    TP +V T 
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S  I    + SR ++A+  L+   G+   P+V+  +A +S   K G  E A  L   M  
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL PD  +Y+ +I      G  E A     +M   GV  + ITYSI+        Q   
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEE 344

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  +++++   G  PD++TY+  I    + G  EE + L   M  +G   N I+Y +++S
Sbjct: 345 AVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVIS 404

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           +  K GR  EA+ LL EM+A G+ PD++ YS  I    +  +  +A+ L  EM +  ++P
Sbjct: 405 ACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTP 464

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N  ++ + +    +      A      +       DV+ Y+ +I          EA+ L+
Sbjct: 465 NVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLF 524

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           R++  + I+P +V+ N+ I    + G   +A  +L  +   GL P A++Y T ++A  + 
Sbjct: 525 REMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKG 584

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
              + ++ LL+EM T  + P  ++Y   +         +EA+ LL DM  +G++PD +TY
Sbjct: 585 DRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTY 644

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD-LKNADCLLVSLQ 545
           N+ I +  K    ++A  LL QM    L P   ++N  ID  C NGD    A  +L  ++
Sbjct: 645 NSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDA-CGNGDQWGTAVEVLFEMR 703

Query: 546 EHNISLTKVAYTTIIKA--HCAEGD 568
              +S  +  Y T + A   C E D
Sbjct: 704 ALGVSPNEATYLTAMYACKRCGEKD 728



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 139/551 (25%), Positives = 239/551 (43%), Gaps = 58/551 (10%)

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G   +AL+  + M   GV+PD+  YS          Q   A +++  +  +G+ PD++TY
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           +  I    ++   +E + L   M  QG K NVI YS  +S+  K G+ + A+ LL EM A
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK-EMIT 325
           VGL PD++TYS +I    K+ +   A +L  EM +K +  N   + +I++G C K     
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITY-SIVIGACAKWGQWE 343

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA      +  +    DV+ Y+  I    K G   EAV L R++  + ++P+ +++  +I
Sbjct: 344 EAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVI 403

Query: 386 YGFCKNGKVADARRLLDTIKLHG-----------------------------------LE 410
               K G+  +A  LL  ++ HG                                   L 
Sbjct: 404 SACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLT 463

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK--GLCKQWKLQEAV 468
           P+ ++Y + ++A  + G  +  + LL+EM    + P  +TY+ VI    + +QW  +EA+
Sbjct: 464 PNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQW--EEAL 521

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            L  +M   G+TPD ++ NT I +  +     +A  +L +M    L P + +Y   ID  
Sbjct: 522 DLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDA- 580

Query: 529 CVNGD-LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           C  GD  K    LL  +    ++   ++Y   + A   +G   +A+     M+  G    
Sbjct: 581 CAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPD 640

Query: 588 IRDYTKS---------------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
           +  Y  +                   M + G  PD       + A   G   G+  E+  
Sbjct: 641 VVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLF 700

Query: 633 VMIKSGLLPDK 643
            M   G+ P++
Sbjct: 701 EMRALGVSPNE 711



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 179/422 (42%), Gaps = 44/422 (10%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRN 62
           ++ G   +AV ++ +M+E  +   + TY+S +         W+    L  ++ +     N
Sbjct: 337 AKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKG-QWEEAVGLLREMPMEGVTPN 395

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +  IVI    ++ R ++AI  LQE       P V++ +A +    +    E A  L  
Sbjct: 396 AISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLR 455

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   GL P+  SYN  I      G  + A+E   +M  HG+ PD ITYS +     +  
Sbjct: 456 EMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGR 515

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           Q   A  + +++  +G  PD+V+    I    Q G  EE L +   M + G   + I+Y 
Sbjct: 516 QWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYR 575

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK-AIQLYNEMCS 301
             + +  K  R  E + LL EM  VGL PD ++Y   +   C  D + K A+ L  +M +
Sbjct: 576 TAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSA-CSVDGLWKEALVLLRDMLA 634

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +SP                                   DVV YN  I+   K G   E
Sbjct: 635 VGLSP-----------------------------------DVVTYNSAINACAKGGRWKE 659

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNG-KVADARRLLDTIKLHGLEPSAVTYTTFM 420
           A  L RQ+    ++P + +FN+ I   C NG +   A  +L  ++  G+ P+  TY T M
Sbjct: 660 ATVLLRQMPTFGLAPDVNSFNAAI-DACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAM 718

Query: 421 NA 422
            A
Sbjct: 719 YA 720


>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
          Length = 674

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/488 (29%), Positives = 237/488 (48%), Gaps = 1/488 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS    NA+++   + G  + A   F  M   G  PD F+YN L+HG+C  G ++EAL  
Sbjct: 178 PSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRL 237

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M R G+ P+ +TY++L  GF   S++  A  V++++  KG      TY  L+ G  +
Sbjct: 238 VKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFR 297

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
               E   ++    +     L+ IAY  LL  + K+    EA+ L  +M   G      T
Sbjct: 298 CLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTT 357

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           +SI+I    K  +     +L ++   K  +     +  I+      + I++A  YF  ++
Sbjct: 358 FSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMV 417

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
               +  V  YNI+ID + K G +  A++  + + E   SP++VTFN+LI G+ K G V 
Sbjct: 418 SDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVH 477

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           DA+  L  +  HGL P  +T+T+ ++  C    +        EM    + P   TY V+I
Sbjct: 478 DAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLI 537

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLC    + +A++LL  M + G+TPD  ++N  I SFC+ + + KA +L N M  + + 
Sbjct: 538 HGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVS 597

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHN-ISLTKVAYTTIIKAHCAEGDVHKAMT 574
           P S TYN LI  LC    +  A  ++++++  + I   +  Y  ++ A    G   +A  
Sbjct: 598 PDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGRFSEAGM 657

Query: 575 FFCQMVEK 582
           F  ++  K
Sbjct: 658 FMNKLHRK 665



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/492 (23%), Positives = 210/492 (42%), Gaps = 37/492 (7%)

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
           L A++  + +LG A  A  +F  + + GL P    YN +I     AG+            
Sbjct: 148 LCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGA------------ 195

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
                                  +  A+   Q++   G  PD  TY  L+ G C+ G V+
Sbjct: 196 -----------------------VDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVD 232

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
           E L+L + M   G + NV+ Y++L+   C + R++EA+ +L  M+  G+     TY  L+
Sbjct: 233 EALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLV 292

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
            G  +  +  +A ++ +E      + +S A+  +L  L + +M  EA      +     +
Sbjct: 293 HGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYL 352

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
                ++I+I   VK+    +  +L    I+K  +     +  +I  F +   ++ A + 
Sbjct: 353 LGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKY 412

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
              +   GL  S  +Y   ++ + + G ++R L  ++ M+     P  VT+  +I G  K
Sbjct: 413 FSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLK 472

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
              + +A   L+ +   G+ PD IT+ ++I   C    L  AF   ++M    + P   T
Sbjct: 473 LGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQT 532

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           YN+LI GLC  G +  A  LL  ++   I+    ++   I + C    + KA   F  M 
Sbjct: 533 YNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMS 592

Query: 581 EKGFEISIRDYT 592
             G  +S   YT
Sbjct: 593 RYG--VSPDSYT 602



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/509 (21%), Positives = 224/509 (44%), Gaps = 39/509 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY-NLRH--TDIMWDLYDDIKVSETPRN 62
           + R G+ H A  V  ++  L L+ S   YN+++  ++R    D  +  +  +       +
Sbjct: 155 WGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPD 214

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T + ++ G+C++  + +A+  +++       P+VV+   ++  +C     E A  +  
Sbjct: 215 CFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLE 274

Query: 123 LMLKYGLHPDAFSYNILIHGL---------------------------------CIAGS- 148
            M + G+     +Y  L+HG                                  C++ + 
Sbjct: 275 RMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKND 334

Query: 149 -MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
             +EA+E    M + G    + T+SI+      + + S   +++   + KG +     Y 
Sbjct: 335 MDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYI 394

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           ++I  + +  ++ +  K    M+S G   +V +Y++++    K+G ++ AL  +  M+  
Sbjct: 395 MIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQES 454

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  P+LVT++ LI G  K   VH A      +    + P+     +++ GLC    + +A
Sbjct: 455 GFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDA 514

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F  +       +V  YN++I G    G++ +A++L  ++    I+P   +FN+ I  
Sbjct: 515 FNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILS 574

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET-KAIGP 446
           FC+  K+  A++L + +  +G+ P + TY   + A C+E  +     ++  ME+   IG 
Sbjct: 575 FCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGT 634

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
              TY  V+  L K  +  EA   +  ++
Sbjct: 635 KQHTYWPVVGALTKMGRFSEAGMFMNKLH 663



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/468 (21%), Positives = 189/468 (40%), Gaps = 50/468 (10%)

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
             Q F  +      L  ++ + G +  +  L+ ++ + G +        L+    +    
Sbjct: 102 FGQHFARDRSVRRALGDALLRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLA 161

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
           H A +++ ++    + P++  + A++        +  A + F  +    C  D   YN +
Sbjct: 162 HYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTL 221

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           + G  + G + EA++L +Q+    I P++VT+  L+ GFC   +V +A  +L+ +K  G+
Sbjct: 222 VHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGV 281

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
             +  TY + ++        +R   +L E          + Y  ++  L K    +EAV+
Sbjct: 282 SATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVE 341

Query: 470 LLEDM----YVIGVTPDQIT-------------------------------YNTIIRSFC 494
           L + M    Y++G T   I                                Y  II+SF 
Sbjct: 342 LAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFL 401

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           +CKD+ KA +  +QM    L  +  +YNI+ID     G+++ A   +  +QE   S   V
Sbjct: 402 RCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLV 461

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK-------------SFFCM--M 599
            + T+I  +   G+VH A  F   ++E G    +  +T              +F C   M
Sbjct: 462 TFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEM 521

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              G  P+ +   V++      G +    EL   M   G+ PD +  N
Sbjct: 522 SEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFN 569



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 123/242 (50%), Gaps = 1/242 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V + +IVID   +   ++ A+  ++      F P++V+ N +++ Y KLG    AK   
Sbjct: 424 SVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFL 483

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +++++GL PD  ++  LI GLC    +++A    ++M   GV P+  TY++L  G    
Sbjct: 484 KMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSA 543

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +S A +++ K+ + G  PD  ++   I  +C++  +E+  KL   M   G   +   Y
Sbjct: 544 GHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTY 603

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVG-LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           + L+ ++C   R+DEA  ++  ME++  +     TY  ++  L K  +  +A    N++ 
Sbjct: 604 NALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGRFSEAGMFMNKLH 663

Query: 301 SK 302
            K
Sbjct: 664 RK 665


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/576 (27%), Positives = 268/576 (46%), Gaps = 25/576 (4%)

Query: 49  DLYDDI-KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           D +D + +    P  V  +  V+D L ++  +  A+ F +    + F   +VS N I+ +
Sbjct: 94  DSFDKLCRGGTVPFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKIL-K 152

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
              +   EVA  +  L+L  G  P+  ++  LI+G C  G M+ A E    M + G+ PD
Sbjct: 153 GLSVDQIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPD 212

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            I YS L  G+     +    K+  + L KG   D+V ++  I  Y + G +     + +
Sbjct: 213 LIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYK 272

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            ML QG   NV+ Y++L+  +C+ GRI EA G+  ++   GL+P +VTYS LI G CK  
Sbjct: 273 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYG 332

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
            +     LY +M      P+   +G ++ GLC++ ++  A  +    +  +   +VV++N
Sbjct: 333 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFN 392

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +IDG+ +L    EA++++R +    I P + T  +L+      G++ +   L   +   
Sbjct: 393 SLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKM 452

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           GLEP AV + T M+A+C+       L L   M+   I        VVI  L K   ++EA
Sbjct: 453 GLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEA 512

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            +   ++    + PD +TYNT+I  +C  + L +A ++   +      P + T  ILI  
Sbjct: 513 SKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHT 572

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK----- 582
           LC N D+  A           IS + ++Y+ II   C  G V +A   F Q ++      
Sbjct: 573 LCKNSDMDGA--------LRIISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDAKILPD 624

Query: 583 --GFEISIRDYTKS--------FFCMMLSNGFPPDQ 608
              + I IR   K          +  ML NG  PD 
Sbjct: 625 VVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPDD 660



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 213/467 (45%), Gaps = 27/467 (5%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D  ++L+  ++      ++   S +IDG  +   L        +   K     VV  ++ 
Sbjct: 195 DRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSST 254

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +  Y K G+   A  ++  ML  G+ P+  +Y ILI GLC  G + EA      + + G+
Sbjct: 255 IDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGL 314

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
           EP  +TYS L  GF     +   + + + ++  G  PD+V Y VL+ G C+ G +   L+
Sbjct: 315 EPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALR 374

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
                L Q  + NV+ ++ L+   C+  R DEAL +   M   G+KPD+ T + L+R   
Sbjct: 375 FSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTV 434

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
            + ++ + + L+  M    + P++ A   ++   C+    T     FD +  +    D+ 
Sbjct: 435 MEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIA 494

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           + N++I+   K  ++ EA + +  L+E ++ P IVT+N++I G+C   ++ +A R+ + +
Sbjct: 495 VCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEML 554

Query: 405 KLHGLEPSAVTYTTFM---------------------------NAYCEEGNIQRLLALLQ 437
           K     P+AVT T  +                           +  C+ G +     +  
Sbjct: 555 KFTPFGPNAVTLTILIHTLCKNSDMDGALRIISPSIISYSIIIDGLCKRGRVDEATNIFH 614

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +     I P  V Y ++I+G CK  +L EA  L E M   GV PD +
Sbjct: 615 QAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPDDL 661



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 213/426 (50%), Gaps = 21/426 (4%)

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G V + L    +++ +GF++++++ + +L  +    +I+ A  +L  +   G  P++VT+
Sbjct: 123 GEVTKALDFHRLVMERGFRVDIVSCNKILKGL-SVDQIEVASRMLSLVLDCGPAPNVVTF 181

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
             LI G CK+ ++ +A +L+  M  + I+P+  A+  ++ G  +  M+      F   + 
Sbjct: 182 CTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 241

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                DVV+++  ID YVK G +  A  +Y++++ + ISP++VT+  LI G C++G++ +
Sbjct: 242 KGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 301

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  +   I   GLEPS VTY++ ++ +C+ GN++   AL ++M      P  V Y V++ 
Sbjct: 302 AFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 361

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLCKQ  +  A++         + P+ + +N++I  +C+     +A ++   M ++ ++P
Sbjct: 362 GLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKP 421

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
             AT   L+    + G LK    L   + +  +    VA+ T++ A             F
Sbjct: 422 DVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDA-------------F 468

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           C+ ++    + + D       +M  N  P D  +C V++    +G  +    +    +++
Sbjct: 469 CKNMKPTIGLQLFD-------LMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLE 521

Query: 637 SGLLPD 642
             + PD
Sbjct: 522 GKMEPD 527



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 122/313 (38%), Gaps = 57/313 (18%)

Query: 331 FDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
           FD L     +   V  +  ++D   + G + +A+  +R ++E+     IV+ N ++ G  
Sbjct: 96  FDKLCRGGTVPFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILKGLS 155

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
            + ++  A R+L  +   G  P+ VT+ T                               
Sbjct: 156 VD-QIEVASRMLSLVLDCGPAPNVVTFCT------------------------------- 183

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
               +I G CK+ ++  A +L + M   G+ PD I Y+T+I  + K   L    +L +Q 
Sbjct: 184 ----LINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 239

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               ++     ++  ID     G L  A  +   +    IS   V YT +IK  C +G +
Sbjct: 240 LHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRI 299

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
           ++A   +CQ+                    L  G  P       ++  F + G+L S F 
Sbjct: 300 YEAFGIYCQI--------------------LKRGLEPSVVTYSSLIDGFCKYGNLRSGFA 339

Query: 630 LAAVMIKSGLLPD 642
           L   MIK G  PD
Sbjct: 340 LYEDMIKMGYPPD 352


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 228/460 (49%), Gaps = 2/460 (0%)

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           C+ ++  +++ FLQ    + + P V+    ++  +  +   E A  +  ++ K+G  PD 
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDV 146

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
           F+YN +I G C A  ++ A +  + M + G EPD +TY+IL   F    ++  A +V+ +
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           LL     P ++TYT+LI      G ++E +KL + MLS+G + +   Y+V+++ MCK G 
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +D A   L  +   G    + TY+IL+R L  + K     +L ++M  K   PN   +  
Sbjct: 267 LDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYST 326

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++  LC    I EA+     +       D   Y+ +I    + G +  A++    +I   
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
             P I+++NS++   CKNG   +A  + + +   G  P+A +Y T   A    G+  R L
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRAL 446

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI-GVTPDQITYNTIIRS 492
            ++ EM +  I P  +TY  +I  LC+   + +A++LL DM+      P  I+YNT++  
Sbjct: 447 GMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLG 506

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            CK + +  A ++L  M      P   TY +LI G+   G
Sbjct: 507 LCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAG 546



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 229/441 (51%), Gaps = 2/441 (0%)

Query: 144 CIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
           C +   +E+L F   M   G +PD I  + L KGF  + +I  A +V++ +L K   PD+
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVME-ILEKHGKPDV 146

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
             Y  +I G+C+   V+   K+ + M  +GF+ +V+ Y++L+ + C  GR+D AL ++ +
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           +     KP ++TY+ILI     Q  + +A++L +EM S+ + P+ + +  ++ G+C++ M
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           +  A  +   +  + C+  V  YNI++   +  G      +L   ++ K   P+ +T+++
Sbjct: 267 LDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYST 326

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI   C++GK+ +A+ +L  +K   L P   +Y   ++A C EG +   +  L +M +  
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             P  ++Y  ++  LCK     EA+ + E +  +G  P+  +YNT+  +     D  +A 
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRAL 446

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL-QEHNISLTKVAYTTIIKA 562
            ++ +M  + ++P   TYN LI  LC +G +  A  LLV + +      T ++Y T++  
Sbjct: 447 GMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLG 506

Query: 563 HCAEGDVHKAMTFFCQMVEKG 583
            C    +  A+     MV +G
Sbjct: 507 LCKVQRIIDAIEVLAAMVNEG 527



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 204/420 (48%), Gaps = 4/420 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+  + VI G C+  R+  A   L     + F P VV+ N ++  +C  G  ++A  + 
Sbjct: 145 DVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVM 204

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +LK    P   +Y ILI      G ++EA++  ++M   G+ PD  TY+++  G    
Sbjct: 205 DQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKE 264

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A++ + ++   G    + TY +L+      G  E G KL   ML +G + N I Y
Sbjct: 265 GMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITY 324

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S L++++C+ G+IDEA  +L  M+   L PD  +Y  LI  LC++ KV  AI+  ++M S
Sbjct: 325 STLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMIS 384

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               P+  ++ +IL  LC+     EA   F+ L    C  +   YN +       G+   
Sbjct: 385 GGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIR 444

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL-DTIKLHGLEPSAVTYTTFM 420
           A+ +  +++   I P  +T+NSLI   C++G V  A  LL D  +    +P+ ++Y T +
Sbjct: 445 ALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVL 504

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC-KQWKLQ--EAVQLLEDMYVI 477
              C+   I   + +L  M  +   P   TYT++I+G+    W+    E   LL +M  I
Sbjct: 505 LGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNMDAI 564



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 192/421 (45%), Gaps = 16/421 (3%)

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           Q +      +   L+  CKS + DE+L  L  M   G KPD++  + LI+G     K+ K
Sbjct: 71  QDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEK 130

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           AIQ+  E+  K   P+ FA+ A++ G C+ + +  A    D +       DVV YNI+I 
Sbjct: 131 AIQVM-EILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIG 189

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
            +   G +  A+++  QL++    P+++T+  LI      G + +A +LLD +   GL P
Sbjct: 190 NFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRP 249

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
              TY   +N  C+EG + R    L  +          TY ++++ L  + K +   +L+
Sbjct: 250 DRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLM 309

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            DM V G  P+ ITY+T+I + C+   + +A  +L  M    L P   +Y+ LI  LC  
Sbjct: 310 SDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCRE 369

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           G +  A   L  +         ++Y +I+ + C  G+  +A+  F ++ E G   +   Y
Sbjct: 370 GKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSY 429

Query: 592 TKSFFCM---------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
              F  +               MLSNG  PD+     ++    + G +    EL   M +
Sbjct: 430 NTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFE 489

Query: 637 S 637
           S
Sbjct: 490 S 490



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 183/399 (45%), Gaps = 4/399 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + +   V  A  V+ +MK+   +  + TYN L+ N       D+   + D +        
Sbjct: 156 FCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPT 215

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T +I+I+    Q  + +A+  L E   +   P   + N +++  CK G  + A     
Sbjct: 216 VITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLS 275

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            + K G      +YNIL+  L   G  E   +  +DM   G EP+ ITYS L        
Sbjct: 276 RISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDG 335

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +I  A  V++ +  K   PD  +Y  LI   C+ G V+  ++  + M+S G   ++++Y+
Sbjct: 336 KIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYN 395

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +L+S+CK+G  DEAL +  ++  VG  P+  +Y+ L   L       +A+ +  EM S 
Sbjct: 396 SILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSN 455

Query: 303 RISPNSFAHGAILLGLCEKEMITEA-RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
            I P+   + +++  LC   ++ +A  +  D      C   V+ YN ++ G  K+  I +
Sbjct: 456 GIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIID 515

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
           A+++   ++ +   P+  T+  LI G    G   DA  L
Sbjct: 516 AIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 267/556 (48%), Gaps = 6/556 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y       DA  ++ +++E     S+ ++NS+L  L   R  D    L+D +K    P N
Sbjct: 326 YGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKP-N 384

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T +I+ID LC   R+ +A     E       P+++S+N ++ R CK    E A  +F 
Sbjct: 385 ISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFE 444

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
              + G +P++ +Y  LI GL   G +++A      M   G + + I Y+ L + F +  
Sbjct: 445 SASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHG 504

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +     K+ ++++ +G  PD+      +    + G VE+G  + E M S GF  +V +YS
Sbjct: 505 RKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYS 564

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L+  + K+G+  E   +   M   G   D   Y+ ++ GLCK  KV KA ++  EM  K
Sbjct: 565 ILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVK 624

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P    +G+I+ GL + + + EA M F+         +V+LY+ +IDG+ K+G I EA
Sbjct: 625 HVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEA 684

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +  ++++K ++P++ T+NSL+    K  ++ +A     ++K     P+  TY+  +N 
Sbjct: 685 YLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILING 744

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C      +     QEM+ + + P  VTYT +I GL K   + +A  L E     G  PD
Sbjct: 745 LCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPD 804

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             ++N +I          +A+Q+  +  L        T   L+D L     L+ A  +  
Sbjct: 805 SASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIVGA 864

Query: 543 SLQEHNISLTKVAYTT 558
            L E  I+ ++ AY +
Sbjct: 865 VLSE--IAKSQHAYRS 878



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 151/658 (22%), Positives = 300/658 (45%), Gaps = 19/658 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
           R+  + DA  VI  M+ L  +     Y  L   L   R  +   +L   ++      +V 
Sbjct: 153 RSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVP 212

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             + ++  L ++ +++ A+  + E  G    P +V  N  +  + K G  ++A   F  +
Sbjct: 213 LFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHEL 272

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             +GL PD  SY  ++  LC AG + EA E    M      P A  Y+ +  G+    + 
Sbjct: 273 KAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERF 332

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A+K++++L  +G  P +V++  ++    +   V+E L L +VM  +  K N+  Y+++
Sbjct: 333 DDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNISTYNII 391

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +C +GR++EA  +  EME  GL P+L++ +I++  LCK +++ +A +++     +  
Sbjct: 392 IDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGC 451

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +PNS  + +++ GL +K  I +A   F+ ++ +    + ++Y  +I  +   G   +  +
Sbjct: 452 NPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHK 511

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +Y+++I +   P +   N+ +    K G+V   R + + +K  G  P   +Y+  ++   
Sbjct: 512 IYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLT 571

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G  +    + Q M  +        Y  V+ GLCK  K+ +A ++LE+M V  V P   
Sbjct: 572 KAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVA 631

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TY +I+    K   L +A+ L  +     +E     Y+ LIDG    G +  A  +L  +
Sbjct: 632 TYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEM 691

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE-----KGFEISI--------RDY 591
            +  ++     + +++ A     ++ +A+  F  M E       +  SI        + Y
Sbjct: 692 MKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 751

Query: 592 TKS--FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            K+  F+  M   G  P+      M+    + G++   + L      +G +PD    N
Sbjct: 752 NKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFN 809



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/561 (25%), Positives = 265/561 (47%), Gaps = 39/561 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNV-- 63
           + + G V  A     ++K   L+    +Y S+++ L     + +  +     E  R+V  
Sbjct: 256 FGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPC 315

Query: 64  -YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            Y  + +I G     R  DA   L+    +   PSVVS N+I++   K    + A  LF 
Sbjct: 316 AYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFD 375

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM----------------------- 159
           +M K    P+  +YNI+I  LC+AG + EA +  ++M                       
Sbjct: 376 VM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKAN 434

Query: 160 ------------GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
                          G  P+++TY  L  G     +I  A+++ +K+L  G D + + YT
Sbjct: 435 QLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYT 494

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            LI  +   G  E+G K+ + M+ +G + ++   +  +  + K+G +++   +  +M++ 
Sbjct: 495 SLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSF 554

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  PD+ +YSILI GL K  +  +   ++  M  +  + ++ A+ A++ GLC+   + +A
Sbjct: 555 GFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKA 614

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
               + + + +    V  Y  ++DG  K+  + EA  L+ +   K I  +++ ++SLI G
Sbjct: 615 YEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDG 674

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           F K G++ +A  +L+ +   GL P+  T+ + M+A  +   I   L   Q M+     P 
Sbjct: 675 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPN 734

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TY+++I GLC+  K  +A    ++M   G+ P+ +TY T+I    K  ++  A+ L  
Sbjct: 735 TYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFE 794

Query: 508 QMWLHNLEPTSATYNILIDGL 528
           +   +   P SA++N LI+G+
Sbjct: 795 RFKTNGGIPDSASFNALIEGM 815



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 130/557 (23%), Positives = 251/557 (45%), Gaps = 36/557 (6%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + ++  L +  RL+DA   +      +F P   +   ++    +    E A  L   M  
Sbjct: 145 AALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQD 204

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G       +  L+  L   G ME AL   +++    +EPD + Y++    F     +  
Sbjct: 205 VGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDM 264

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV--------------------------- 219
           AWK   +L   G  PD V+YT ++   C+ G +                           
Sbjct: 265 AWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIM 324

Query: 220 --------EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
                   ++  KL E +  +G   +V++++ +L+ + K  ++DEAL  L+++     KP
Sbjct: 325 GYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL-TLFDVMKKDAKP 383

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           ++ TY+I+I  LC   +V++A ++ +EM    + PN  +   ++  LC+   + EA   F
Sbjct: 384 NISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIF 443

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           +S     C  + V Y  +IDG  K G I +A +L+ ++++     + + + SLI  F  +
Sbjct: 444 ESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMH 503

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G+  D  ++   +   G  P      T+M+   + G +++  A+ ++M++    P   +Y
Sbjct: 504 GRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSY 563

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           +++I GL K  + +E   + + M   G   D   YN ++   CK   + KA+++L +M +
Sbjct: 564 SILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKV 623

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
            ++ PT ATY  ++DGL     L  A  L    +   I L  + Y+++I      G + +
Sbjct: 624 KHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDE 683

Query: 572 AMTFFCQMVEKGFEISI 588
           A     +M++KG   ++
Sbjct: 684 AYLILEEMMKKGLTPNV 700



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/573 (22%), Positives = 245/573 (42%), Gaps = 53/573 (9%)

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L YGL   A +   L+  L  +  +E+A      M      P    Y++L        Q 
Sbjct: 135 LGYGLPNPACA--ALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQP 192

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++++++   G +  +  +T L+    + G +E  L L + +     + +++ Y+V 
Sbjct: 193 ERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVC 252

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +    K+G +D A    +E++A GL+PD V+Y+ ++  LCK  ++ +A +L+ +M ++R 
Sbjct: 253 IDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERD 312

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P ++A+  +++G    E   +A    + L    CI  VV +N ++    K   + EA+ 
Sbjct: 313 VPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALT 372

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+  +++K   P+I T+N +I   C  G+V +A ++ D ++L GL P+ ++    ++  C
Sbjct: 373 LF-DVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLC 431

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +   ++    + +    +   P  VTY  +I GL K+ K+ +A +L E M   G   + I
Sbjct: 432 KANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPI 491

Query: 485 TYNTIIRSF---------------------------------C--KCKDLRKAFQLLNQM 509
            Y ++IR+F                                 C  K  ++ K   +   M
Sbjct: 492 IYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDM 551

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
                 P   +Y+ILI GL   G  +    +  ++ +   +L   AY  ++   C  G V
Sbjct: 552 KSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKV 611

Query: 570 HKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVM 614
            KA     +M  K    ++  Y                   F    S G   +  +   +
Sbjct: 612 DKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSL 671

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +  F + G +   + +   M+K GL P+ +  N
Sbjct: 672 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 704



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/165 (20%), Positives = 66/165 (40%)

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           ++  L  +L+EM     G  +     ++  L +  +L++A +++  M  +   P    Y 
Sbjct: 121 DLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYT 180

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            +I +  + +   +A +LL QM     E +   +  L+  L   G ++ A  L+  ++  
Sbjct: 181 VLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGS 240

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            +    V Y   I      G V  A  FF ++   G       YT
Sbjct: 241 CLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYT 285



 Score = 43.5 bits (101), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 40/194 (20%), Positives = 74/194 (38%), Gaps = 15/194 (7%)

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           ++LE+M  +G          ++ +  + + L  AF+++  M      P  + Y +LI  L
Sbjct: 127 KVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGAL 186

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
                 + A  LL  +Q+    ++   +TT+++A   EG +  A+    ++     E  I
Sbjct: 187 AEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDI 246

Query: 589 ---------------RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
                           D    FF  + ++G  PD      M+    + G LG   EL   
Sbjct: 247 VLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQ 306

Query: 634 MIKSGLLPDKFLIN 647
           M     +P  +  N
Sbjct: 307 MEAERDVPCAYAYN 320


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 235/470 (50%), Gaps = 2/470 (0%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV-EPDAITYSILA 175
           A   F  ML     P   S N L+  +         +   + +   G  +P  +T SI  
Sbjct: 39  AVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFI 98

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                L Q+  A+ V+ K++ +G   D  T T L+ G C  G   E L L +  +S+GF 
Sbjct: 99  NSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFS 158

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            + + Y  L++ +CK G+  +A+ LL +ME  G++P+L+ Y++++ GLCK+  V +A  L
Sbjct: 159 FDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGL 218

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYV 354
            +EM  K I  + F + +++ G C       A    + ++M   ++ DV  +NI++D   
Sbjct: 219 CSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALC 278

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           KLG + EA  ++  +I++ + P +V+ N+L+ G+C  G +++A+ + D +   G  P+ +
Sbjct: 279 KLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVI 338

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           +Y+T +N YC+   +   L LL EM  + + P  VTY  ++ GL K  ++     L+E M
Sbjct: 339 SYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAM 398

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G  PD ITYN ++  + K + L KA  L   +    + P   TYNILIDGLC  G +
Sbjct: 399 RASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRM 458

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           K A  +   L           Y  +I     EG + +A     +MV+ GF
Sbjct: 459 KAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGF 508



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 238/508 (46%), Gaps = 11/508 (2%)

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           S +PR     +   D         DA+            PS+VSLN ++S   K      
Sbjct: 23  SHSPRKTLPKTPTFD---------DAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPT 73

Query: 117 AKGLFCLMLKYGL-HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
              L   +   G   P   + +I I+ L   G M  A      + + G   D  T + L 
Sbjct: 74  VVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLM 133

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
           KG  L  +   A  +    + KG   D V Y  LI G C++G   + ++L   M   G +
Sbjct: 134 KGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVR 193

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            N+I Y++++  +CK G + EA GL  EM   G+  D+ TY+ LI G C   +   A++L
Sbjct: 194 PNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRL 253

Query: 296 YNEMCSKR-ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
            NEM  K  + P+ +    ++  LC+  M+ EAR  F  +I      DVV  N +++G+ 
Sbjct: 254 LNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWC 313

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
             G + EA +++ +++E+   P+++++++LI G+CK   V +A RLL  +    L P  V
Sbjct: 314 LRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTV 373

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TY   ++   + G +     L++ M      P  +TY V++    K+  L +A+ L + +
Sbjct: 374 TYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHI 433

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G++P+  TYN +I   CK   ++ A ++   + +    P   TYNI+I+GL   G L
Sbjct: 434 VDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLL 493

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKA 562
             A+ LL+ + +       V +  +++A
Sbjct: 494 DEAEALLLEMVDDGFPPNAVTFDPLVRA 521



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 226/434 (52%), Gaps = 1/434 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+V+L+  ++    LG   +A  +   ++K G   D F+   L+ GLC+ G   EAL  
Sbjct: 89  PSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNL 148

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            +     G   D + Y  L  G   + +   A ++++K+   G  P+++ Y +++ G C+
Sbjct: 149 YDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCK 208

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLV 274
            G V E   L   M+ +G  ++V  Y+ L+   C +G+   A+ LL EM     ++PD+ 
Sbjct: 209 EGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVY 268

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           T++IL+  LCK   V +A  ++  M  + + P+  +  A++ G C +  ++EA+  FD +
Sbjct: 269 TFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRM 328

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           +    + +V+ Y+ +I+GY K+  + EA++L  ++ ++ + P  VT+N L+ G  K+G+V
Sbjct: 329 VERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRV 388

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
                L++ ++  G  P  +TY   ++ Y +   + + LAL Q +    I P   TY ++
Sbjct: 389 LYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNIL 448

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I GLCK  +++ A ++ + + V G  P+  TYN +I    +   L +A  LL +M     
Sbjct: 449 IDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGF 508

Query: 515 EPTSATYNILIDGL 528
            P + T++ L+  L
Sbjct: 509 PPNAVTFDPLVRAL 522



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 207/399 (51%), Gaps = 1/399 (0%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T + ++ GLC + R  +A+        K F    V    +++  CK+G    A  L   
Sbjct: 127 FTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRK 186

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M K G+ P+   YN+++ GLC  G + EA    ++M   G+  D  TY+ L  GF    Q
Sbjct: 187 MEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQ 246

Query: 184 ISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
             GA +++ ++++K    PD+ T+ +L+   C++G V E   +  +M+ +G + +V++ +
Sbjct: 247 FQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCN 306

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++  C  G + EA  +   M   G  P++++YS LI G CK   V +A++L  EM  +
Sbjct: 307 ALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQR 366

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P++  +  +L GL +   +       +++  S    D++ YN+++D Y+K   + +A
Sbjct: 367 NLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKA 426

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + L++ +++  ISP+I T+N LI G CK G++  A+ +   + + G  P+  TY   +N 
Sbjct: 427 LALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMING 486

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
              EG +    ALL EM      P  VT+  +++ L ++
Sbjct: 487 LRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLEK 525



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 235/492 (47%), Gaps = 5/492 (1%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR-N 62
            +T    DAV    +M  L    SI + N LL ++   +H   +  L   +    TP+ +
Sbjct: 31  PKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPS 90

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T SI I+ L    ++  A   + +   + FG    +L  +M   C  G    A  L+ 
Sbjct: 91  LVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYD 150

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             +  G   D   Y  LI+GLC  G   +A+E    M + GV P+ I Y+++  G     
Sbjct: 151 HAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEG 210

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LREVMLSQGFKLNVIAY 241
            ++ A  +  +++ KG   D+ TY  LI G+C  G  +  ++ L E+++ +  + +V  +
Sbjct: 211 LVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTF 270

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++L+ ++CK G + EA  +   M   GL+PD+V+ + L+ G C +  + +A ++++ M  
Sbjct: 271 NILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVE 330

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +   PN  ++  ++ G C+ +M+ EA      +   N + D V YN ++DG  K G +  
Sbjct: 331 RGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLY 390

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
              L   +     +P ++T+N L+  + K   +  A  L   I   G+ P+  TY   ++
Sbjct: 391 EWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILID 450

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+ G ++    + Q +  K   P   TY ++I GL ++  L EA  LL +M   G  P
Sbjct: 451 GLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPP 510

Query: 482 DQITYNTIIRSF 493
           + +T++ ++R+ 
Sbjct: 511 NAVTFDPLVRAL 522



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 190/423 (44%), Gaps = 16/423 (3%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P +VT ++ I     +G +     +   ++ +GF ++    + L+  +C  GR  EAL L
Sbjct: 89  PSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNL 148

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
                + G   D V Y  LI GLCK  K   AI+L  +M    + PN   +  ++ GLC+
Sbjct: 149 YDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCK 208

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR-ISPSIV 379
           + ++TEA      ++      DV  YN +I G+   G    AV+L  +++ K  + P + 
Sbjct: 209 EGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVY 268

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           TFN L+   CK G VA+AR +   +   GLEP  V+    MN +C  G +     +   M
Sbjct: 269 TFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRM 328

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
             +   P  ++Y+ +I G CK   + EA++LL +M+   + PD +TYN ++    K   +
Sbjct: 329 VERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRV 388

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
              + L+  M      P   TYN+L+D       L  A  L   + +  IS     Y  +
Sbjct: 389 LYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNIL 448

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGF 604
           I   C  G +  A   F  +  KG   +IR Y                ++    M+ +GF
Sbjct: 449 IDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGF 508

Query: 605 PPD 607
           PP+
Sbjct: 509 PPN 511



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 129/305 (42%), Gaps = 17/305 (5%)

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL-EPSA 413
           K     +AV  + +++     PSIV+ N L+    K         L   +   G  +PS 
Sbjct: 32  KTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSL 91

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VT + F+N+    G +    +++ ++  +  G    T T ++KGLC + +  EA+ L + 
Sbjct: 92  VTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDH 151

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
               G + D++ Y T+I   CK    R A +LL +M    + P    YN+++DGLC  G 
Sbjct: 152 AVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGL 211

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK--------GFE 585
           +  A  L   +    I +    Y ++I   C  G    A+    +MV K         F 
Sbjct: 212 VTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFN 271

Query: 586 ISIRDYTK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
           I +    K        + F +M+  G  PD   C  ++  +   G +    E+   M++ 
Sbjct: 272 ILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVER 331

Query: 638 GLLPD 642
           G LP+
Sbjct: 332 GKLPN 336


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 221/445 (49%), Gaps = 36/445 (8%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           W  +++ K+ +   +VY+  IVI G C+   ++ +   L E     F P+VV    ++  
Sbjct: 149 WCFFNESKI-KVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDG 207

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
            CK G  E AK LF  M K+GL  + ++Y +LIHGL   G  ++  E    M  HGV P+
Sbjct: 208 CCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPN 267

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
             TY+ +        +   A+KV  ++  +G   +IVTY  LI G C+     E  K+ +
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMD 327

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M S     N+I Y+ L+   C  G++ +AL L  ++++ GL P LVTY++L+ G C++ 
Sbjct: 328 QMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKG 387

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
               A ++  EM  + I P+                                    V Y 
Sbjct: 388 DTSGAAKMVKEMEERGIKPSK-----------------------------------VTYT 412

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           I+ID + +  N+  A+QL   + E  + P + T++ LI+GFC  G++ +A RL  ++   
Sbjct: 413 ILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
            LEP+ V Y T +  YC+EG+  R L L ++ME K + P   +Y+ +I+ LCK+ KL+EA
Sbjct: 473 MLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEA 532

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRS 492
             L+E M   G+ P     N I R+
Sbjct: 533 EDLVEKMIDSGIDPSDTICNLISRA 557



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 225/452 (49%), Gaps = 1/452 (0%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           Y ++I+    + S++ ++ + N+M   G  P +  ++ L       S  +  W    +  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
           IK    D+ ++ ++I G C+ G +E+   L   +   GF  NV+ Y+ L+   CK G I+
Sbjct: 157 IKVV-LDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           +A  L +EM   GL  +  TY++LI GL K     +  ++Y +M    + PN + +  ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
             LC+     +A   FD +       ++V YN +I G  +     EA ++  Q+    I+
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+++T+N+LI GFC  GK+  A  L   +K  GL PS VTY   ++ +C +G+      +
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           ++EME + I P+ VTYT++I    +   ++ A+QL   M  +G+ PD  TY+ +I  FC 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              + +A +L   M    LEP    YN +I G C  G    A  L   ++E  ++    +
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVAS 515

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           Y+ +I+  C E  + +A     +M++ G + S
Sbjct: 516 YSYLIRVLCKERKLKEAEDLVEKMIDSGIDPS 547



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 250/510 (49%), Gaps = 42/510 (8%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           + S+T   +Y   ++I+   Q   L  +I +  E   K F P     N +++    +G +
Sbjct: 88  ETSKTKSRLY--EVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFV--VGSS 143

Query: 115 EVAKGLFCLM--LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
              +  +C     K  +  D +S+ I+I G C AG +E++ +   ++   G  P+ + Y+
Sbjct: 144 SFNQ-WWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYT 202

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  G     +I  A  +  ++   G   +  TYTVLI G  + G  ++G ++ E M   
Sbjct: 203 TLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEH 262

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   N+  Y+ +++ +CK GR  +A  +  EM   G+  ++VTY+ LI GLC++ K ++A
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEA 322

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            ++ ++M S  I+PN                                   ++ YN +IDG
Sbjct: 323 NKVMDQMKSYVINPN-----------------------------------LITYNTLIDG 347

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           +  +G +G+A+ L R L  + +SPS+VT+N L+ GFC+ G  + A +++  ++  G++PS
Sbjct: 348 FCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPS 407

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            VTYT  ++ +    N++  + L   ME   + P   TY+V+I G C + ++ EA +L +
Sbjct: 408 KVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            M    + P+++ YNT+I  +CK     +A +L   M    L P  A+Y+ LI  LC   
Sbjct: 468 SMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKER 527

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            LK A+ L+  + +  I  +      I +A
Sbjct: 528 KLKEAEDLVEKMIDSGIDPSDTICNLISRA 557



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 172/333 (51%), Gaps = 3/333 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVY 64
           + G +  A  +  +M +  L  +  TY  L++ L    I    +++Y+ ++      N+Y
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLY 269

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + V++ LC+  R +DA     E   +    ++V+ N ++   C+   A  A  +   M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             Y ++P+  +YN LI G C  G + +AL    D+   G+ P  +TY++L  GF      
Sbjct: 330 KSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDT 389

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           SGA K+++++  +G  P  VTYT+LI  + +  N+E  ++LR  M   G   +V  YSVL
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVL 449

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   C  G+++EA  L   M    L+P+ V Y+ +I G CK+   ++A++L+ +M  K +
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKEL 509

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           +PN  ++  ++  LC++  + EA    + +I S
Sbjct: 510 APNVASYSYLIRVLCKERKLKEAEDLVEKMIDS 542



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 177/385 (45%), Gaps = 23/385 (5%)

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L  L E E    K  L  Y ++I    +   +  +I  +NEM  K   P S     +L  
Sbjct: 81  LHYLTESETSKTKSRL--YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTF 138

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           +       +   +F+   +   + DV  + I+I G  + G I ++  L  +L E   SP+
Sbjct: 139 VVGSSSFNQWWCFFNESKIK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPN 197

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           +V + +LI G CK G++  A+ L   +   GL  +  TYT  ++   + G  ++   + +
Sbjct: 198 VVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYE 257

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           +M+   + P   TY  V+  LCK  + ++A ++ ++M   GV+ + +TYNT+I   C+  
Sbjct: 258 KMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREM 317

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
              +A ++++QM  + + P   TYN LIDG C  G L  A  L   L+   +S + V Y 
Sbjct: 318 KANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYN 377

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIA 617
            ++   C +GD   A     +M E+G + S   YT                    +++  
Sbjct: 378 VLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYT--------------------ILIDT 417

Query: 618 FHQGGDLGSVFELAAVMIKSGLLPD 642
           F +  ++ +  +L + M + GL+PD
Sbjct: 418 FARSDNMETAIQLRSSMEELGLVPD 442



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/455 (23%), Positives = 180/455 (39%), Gaps = 69/455 (15%)

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY-------------------- 296
           A  LL ++ +  ++    T S L+  L + +      +LY                    
Sbjct: 58  AQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYF 117

Query: 297 NEMCSKRISPNS----------------------------------FAHGAILLGLCEKE 322
           NEM  K   P S                                  ++ G ++ G CE  
Sbjct: 118 NEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAG 177

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            I ++      L       +VV+Y  +IDG  K G I +A  L+ ++ +  +  +  T+ 
Sbjct: 178 EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYT 237

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
            LI+G  KNG       + + ++ HG+ P+  TY   MN  C++G  +    +  EM  +
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRER 297

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            +    VTY  +I GLC++ K  EA ++++ M    + P+ ITYNT+I  FC    L KA
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKA 357

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
             L   +    L P+  TYN+L+ G C  GD   A  ++  ++E  I  +KV YT +I  
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPD 607
                ++  A+     M E G    +  Y+                  F  M+     P+
Sbjct: 418 FARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPN 477

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           + I   M++ + + G       L   M +  L P+
Sbjct: 478 EVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPN 512



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 3/278 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G   DA  V  +M+E  +  +I TYN+L+  L      +    + D +K      N+ 
Sbjct: 280 KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLI 339

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +IDG C   +L  A+   ++   +   PS+V+ N ++S +C+ G    A  +   M
Sbjct: 340 TYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEM 399

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G+ P   +Y ILI     + +ME A++  + M   G+ PD  TYS+L  GF +  Q+
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQM 459

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A ++ + ++ K  +P+ V Y  +I GYC+ G+    L+L   M  +    NV +YS L
Sbjct: 460 NEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYL 519

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           +  +CK  ++ EA  L+ +M   G+ P     +++ R 
Sbjct: 520 IRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLISRA 557



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 3/175 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRN 62
           + R G    A  ++ +M+E  +K S  TY  L+     +D M     L   ++      +
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPD 442

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+T S++I G C + ++ +A    +    K   P+ V  N ++  YCK G +  A  LF 
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFR 502

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
            M +  L P+  SY+ LI  LC    ++EA +    M   G++P     +++++ 
Sbjct: 503 DMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLISRA 557


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 221/445 (49%), Gaps = 36/445 (8%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           W  +++ K+ +   +VY+  IVI G C+   ++ +   L E     F P+VV    ++  
Sbjct: 149 WRFFNESKI-KVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDG 207

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
            CK G  E AK LF  M K+GL  + ++Y +LIHGL   G  ++  E    M   GV P+
Sbjct: 208 CCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPN 267

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
             TY+ +        +   A+K+  ++  +G   +IVTY  LI G C+     E  K+ +
Sbjct: 268 LYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMD 327

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M S G   N+I Y+ L+   C  G++ +AL L  ++++ GL P LVTY+IL+ G CK+ 
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKG 387

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
               A ++  EM  + I P+                                    + Y 
Sbjct: 388 DTSGAGKVVKEMEERGIKPSK-----------------------------------ITYT 412

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           I+ID + ++ N+ +A+QL   + E  ++P + T++ LI+GFC  G++ +A RL   +   
Sbjct: 413 ILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAK 472

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
            LEP+ V Y T +  YC+EG+  R L L +EME K + P   +Y  +I+ LCK+ K +EA
Sbjct: 473 KLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEA 532

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRS 492
             L+E M   G+ P     N I R+
Sbjct: 533 EGLVEKMIDTGIDPSDSILNLISRA 557



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 226/452 (50%), Gaps = 1/452 (0%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           Y ++I+    + S++ ++ + N+M   G  P +  ++ L       S  +  W+   +  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
           IK  D D+ ++ ++I G C+ G +E+   L   +   GF  NV+ Y+ L+   CK G I+
Sbjct: 157 IK-VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           +A  L +EM   GL  +  TY++LI GL K     +  ++Y +M    + PN + +  ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
              C+     +A   FD +       ++V YN +I G  +     EA ++  Q+    I+
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+++T+N+LI GFC  GK+  A  L   +K  GL PS VTY   ++ +C++G+      +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           ++EME + I P+ +TYT++I    +   +++A+QL   M  +G+TPD  TY+ +I  FC 
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              + +A +L   M    LEP    YN ++ G C  G    A  L   ++E  +     +
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           Y  +I+  C E    +A     +M++ G + S
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMIDTGIDPS 547



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 192/418 (45%), Gaps = 18/418 (4%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y V++++  +S  +D ++    EM   G  P    ++ L+  +      ++  + +NE  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE-- 154

Query: 301 SK-RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
           SK ++  + ++ G ++ G CE   I ++      L       +VV+Y  +IDG  K G I
Sbjct: 155 SKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEI 214

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A  L+ ++ +  +  +  T+  LI+G  KNG       + + ++  G+ P+  TY   
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           MN +C++G  +    L  EM  + +    VTY  +I GLC++ K  EA ++++ M   G+
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+ ITYNT+I  FC    L KA  L   +    L P+  TYNIL+ G C  GD   A  
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------- 592
           ++  ++E  I  +K+ YT +I       ++ KA+     M E G    +  Y+       
Sbjct: 395 VVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFC 454

Query: 593 --------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                      F +M++    P++ I   M++ + + G       L   M +  L P+
Sbjct: 455 IKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPN 512



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 141/304 (46%), Gaps = 36/304 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + + G   DA  +  +M+E  +  +I TYN+L                            
Sbjct: 278 HCKDGRTKDAFKLFDEMRERGVSCNIVTYNTL---------------------------- 309

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL-FCLM 124
               I GLC++ +  +A   + +       P++++ N ++  +C  G  ++ K L  C  
Sbjct: 310 ----IGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFC--GVGKLGKALSLCRD 363

Query: 125 LK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           LK  GL P   +YNIL+ G C  G    A +   +M   G++P  ITY+IL   F  +  
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDN 423

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A ++   +   G  PD+ TY+VLI G+C  G + E  +L ++M+++  + N + Y+ 
Sbjct: 424 MEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNT 483

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++   CK G    AL L  EME   L P++ +Y  +I  LCK+ K  +A  L  +M    
Sbjct: 484 MVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTG 543

Query: 304 ISPN 307
           I P+
Sbjct: 544 IDPS 547



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 3/175 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRN 62
           + + G    A  V+ +M+E  +K S  TY  L+      D M     L   ++      +
Sbjct: 383 FCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPD 442

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+T S++I G C + ++ +A    +    K+  P+ V  N ++  YCK G +  A  LF 
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFR 502

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
            M +  L P+  SY  +I  LC     +EA      M   G++P     +++++ 
Sbjct: 503 EMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISRA 557


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 224/460 (48%), Gaps = 3/460 (0%)

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL-MLKYGLHPD 132
           C+  +  +++ FL+    K + P V+    ++  +    F  + K    + +L+    PD
Sbjct: 89  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGF--FNFKNIEKASRVMEILESHTEPD 146

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
            F+YN +I G C    +E A +  N M   G  PD +TY+I+        ++  A  V+ 
Sbjct: 147 VFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLD 206

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           +LL+    P ++TYT+LI      G + E +KL E ML++G   ++  Y+ ++  MCK G
Sbjct: 207 QLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEG 266

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            ++ A  L+  + + G +PD+++Y+IL+R    Q K  +  +L  EM S+   PN   + 
Sbjct: 267 MVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYS 326

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC    I EA      +I      D   Y+ +I    K G +  A+ +   +I  
Sbjct: 327 ILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN 386

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P IV +N+++   CKNG    A  + + ++  G  P+  +Y T ++A    G+  R 
Sbjct: 387 GCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRA 446

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L ++  M +K I P  +TY  +I  LC+   ++EA+ LL+DM   G  P  I+YN ++  
Sbjct: 447 LGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLG 506

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            CK + +  A  +  +M      P   TY +LI+G+   G
Sbjct: 507 LCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG 546



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 230/445 (51%), Gaps = 1/445 (0%)

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           L++  C AG   E+L F   +   G  PD I  + L KGF     I  A +V++ +L   
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVME-ILESH 142

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
           ++PD+  Y  +I G+C++  +E   ++   M ++GF  +++ Y++++ S+C   ++  AL
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +L ++      P ++TY+ILI     +  +++A++L  EM ++ + P+ + + AI+ G+
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C++ M+  A     SL    C  DV+ YNI++  ++  G   E  +L  ++  +   P+ 
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           VT++ LI   C+ G++ +A  +L  +    L P   +Y   ++A C+EG +   + ++  
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M +    P  V Y  ++  LCK     +A+++   +  +G  P+  +YNT+I +   C D
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 442

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
             +A  ++  M    ++P   TYN LI  LC +G ++ A  LL  +++     T ++Y  
Sbjct: 443 RSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 502

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKG 583
           ++   C    +  A+  F +M+EKG
Sbjct: 503 VLLGLCKVRRIDDAIGMFAEMIEKG 527



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 227/419 (54%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V + NA++S +CK+   E A  +   M   G  PD  +YNI+I  LC    +  AL  
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + +      P  ITY+IL +   +   I+ A K+++++L +G  PD+ TY  +I G C+
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G VE   +L   + S+G + +VI+Y++LL +    G+ DE   L+ EM + G +P+ VT
Sbjct: 265 EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 324

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           YSILI  LC+  ++ +AI +   M  K ++P+++++  ++  LC++  +  A    D +I
Sbjct: 325 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 384

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            + C+ D+V YN ++    K GN  +A++++ +L      P++ ++N++I      G  +
Sbjct: 385 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 444

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  ++  +   G++P  +TY + ++  C +G ++  + LL +ME     PT ++Y +V+
Sbjct: 445 RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 504

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
            GLCK  ++ +A+ +  +M   G  P++ TY  +I          +A +L N ++  ++
Sbjct: 505 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDV 563



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 225/463 (48%), Gaps = 3/463 (0%)

Query: 101 LNAIMSRYCKLG-FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           L  +++R CK G F E    L CL+ K G  PD      LI G     ++E+A      +
Sbjct: 81  LMKLLNRSCKAGKFNESLYFLECLVNK-GYTPDVILCTKLIKGFFNFKNIEKASRVMEIL 139

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
             H  EPD   Y+ +  GF  ++QI  A +V+ ++  +G  PDIVTY ++I   C    +
Sbjct: 140 ESH-TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKL 198

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
              L + + +L       VI Y++L+ +    G I+EA+ LL EM A GL PD+ TY+ +
Sbjct: 199 GLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAI 258

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           IRG+CK+  V +A +L   + SK   P+  ++  +L     +    E       +    C
Sbjct: 259 IRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGC 318

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             + V Y+I+I    + G I EA+ + + +IEK ++P   +++ LI   CK G++  A  
Sbjct: 319 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 378

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           ++D +  +G  P  V Y T + A C+ GN  + L +  ++      P   +Y  +I  L 
Sbjct: 379 IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALW 438

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
                  A+ ++  M   G+ PD+ITYN++I   C+   + +A  LL+ M      PT  
Sbjct: 439 SCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVI 498

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
           +YNI++ GLC    + +A  +   + E      +  Y  +I+ 
Sbjct: 499 SYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEG 541



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 213/445 (47%), Gaps = 16/445 (3%)

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+ G   E L   E ++++G+  +VI  + L+        I++A  ++  +E+   +PD+
Sbjct: 89  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES-HTEPDV 147

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
             Y+ +I G CK +++  A Q+ N M ++   P+   +  ++  LC +  +  A    D 
Sbjct: 148 FAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQ 207

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L++ NC+  V+ Y I+I+  +  G I EA++L  +++ + + P + T+N++I G CK G 
Sbjct: 208 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 267

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V  A  L+ ++   G EP  ++Y   + A+  +G       L+ EM ++   P  VTY++
Sbjct: 268 VERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSI 327

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I  LC+  ++ EA+ +L+ M    +TPD  +Y+ +I + CK   L  A  +++ M  + 
Sbjct: 328 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 387

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
             P    YN ++  LC NG+   A  +   L+         +Y T+I A  + GD  +A+
Sbjct: 388 CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL 447

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAF 618
                M+ KG +     Y     C+               M  +GF P      ++L+  
Sbjct: 448 GMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 507

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDK 643
            +   +     + A MI+ G  P++
Sbjct: 508 CKVRRIDDAIGMFAEMIEKGCRPNE 532



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 194/402 (48%), Gaps = 3/402 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           + +   +  A  V+ +MK       I TYN +   L N R   +   + D + +      
Sbjct: 157 FCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPT 216

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T +I+I+    +  + +A+  L+E   +   P + + NAI+   CK G  E A  L  
Sbjct: 217 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELIT 276

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +   G  PD  SYNIL+      G  +E  +   +M   G EP+ +TYSIL        
Sbjct: 277 SLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFG 336

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +I  A  V++ ++ K   PD  +Y  LI   C+ G ++  + + + M+S G   +++ Y+
Sbjct: 337 RIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYN 396

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +L+++CK+G  ++AL +  ++  +G  P++ +Y+ +I  L       +A+ +   M SK
Sbjct: 397 TILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISK 456

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I P+   + +++  LC   ++ EA    D +  S     V+ YNI++ G  K+  I +A
Sbjct: 457 GIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDA 516

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           + ++ ++IEK   P+  T+  LI G    G   +A  L +++
Sbjct: 517 IGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 558



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 187/404 (46%), Gaps = 21/404 (5%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           LL+  CK+G+ +E+L  L  +   G  PD++  + LI+G      + KA ++  E+    
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 142

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+ FA+ A++ G C+   I  A    + +     + D+V YNIMI        +G A+
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +  QL+     P+++T+  LI      G + +A +LL+ +   GL P   TY   +   
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+EG ++R   L+  + +K   P  ++Y ++++    Q K  E  +L+ +M+  G  P++
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TY+ +I S C+   + +A  +L  M    L P + +Y+ LI  LC  G L  A  ++  
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           +  +      V Y TI+ A C  G+ ++A+  F ++  +G                   G
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL--RGM------------------G 422

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            PP+      M+ A    GD      +   MI  G+ PD+   N
Sbjct: 423 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYN 466


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 162/598 (27%), Positives = 291/598 (48%), Gaps = 25/598 (4%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSE--TPRN 62
           TG   +A+ ++ +MKE  + V   +Y + +         W+    L  +I   E  +P N
Sbjct: 123 TGKWREALGILDEMKEGGV-VCAHSYTTAITTCGRQG-QWEKALELLREIPEQEGVSP-N 179

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+  +  I+      + + A+  L+E A +E  P  +S N+ +    + G  E   GL  
Sbjct: 180 VFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLR 239

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   GL PDA +YN +I G    G  +EAL    +M   G+ P+ I+Y++  +      
Sbjct: 240 EMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGR-- 297

Query: 183 QISGAWK----VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             SG WK    V++++  +G  PD+++Y   I      G  E  + L + M  +G   N 
Sbjct: 298 --SGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNT 355

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           I ++  + +  K G+ ++A+ LL E+ A+GL PD  +++  I    K  +  +A++L  E
Sbjct: 356 IHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKE 415

Query: 299 MCSKRISPNSFAHGAILLGLCEK----EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           M +KR+ P++ ++ + +   C K    EM  E R    +  ++    +V+  NI I    
Sbjct: 416 MPAKRLKPDAISYNSAIE-ACGKGGQWEMALELRRQMPTKGLT---PNVISSNIAIRACG 471

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           + G   E ++L RQ+  + ++P+++T+NS I    K G+   A  LL  +K   + P ++
Sbjct: 472 ERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSI 531

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TY + + A  + G  +  +ALL+EM  + + P  ++YT  I    K  + + AV+LL  M
Sbjct: 532 TYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQM 591

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+TP+ ITYN++I++  +  +  KA  LL ++    + P   +YN+ I      G  
Sbjct: 592 PTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRW 651

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           + A  LL  +    ++   ++YT+ I+A  AEG+  KA+     M   G   +   Y+
Sbjct: 652 EEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYS 709



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 180/421 (42%), Gaps = 21/421 (4%)

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR- 303
           L     +G+  EALG+L EM+  G+     +Y+  I    +Q +  KA++L  E+  +  
Sbjct: 117 LREAATTGKWREALGILDEMKEGGVV-CAHSYTTAITTCGRQGQWEKALELLREIPEQEG 175

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           +SPN F + + +      +    A      +     + D + YN  I    + G     +
Sbjct: 176 VSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVI 235

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L R++    ++P  +T+NS+I G  K G+  +A  +L  +   GL P  ++Y   + A 
Sbjct: 236 GLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRAC 295

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK--GLCKQWKLQEAVQLLEDMYVIGVTP 481
              G  +  + +L++ME++ + P  ++Y   IK  G   QW  + +V LL++M   GV P
Sbjct: 296 GRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQW--ETSVDLLDEMAGRGVAP 353

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           + I +N+ I +  K     KA +LL ++    L P + ++N  I     +G  K A  LL
Sbjct: 354 NTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELL 413

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF-------EISIRDYTK- 593
             +    +    ++Y + I+A    G    A+    QM  KG         I+IR   + 
Sbjct: 414 KEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGER 473

Query: 594 -------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
                       M + G  P+       +    +GG      +L A M +  + PD    
Sbjct: 474 GRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITY 533

Query: 647 N 647
           N
Sbjct: 534 N 534


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 254/524 (48%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N YT   V+  LC + R+ DA+  L E   +   P     + I+   C+ G    A  
Sbjct: 119 PPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVR 178

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   +   G   D  + N++++ +C  GS+++AL    D+   G EPD ++Y+ + KG  
Sbjct: 179 VLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLC 238

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           +  +     +++++++     P+IVT+  LI   C+ G  E   ++   M   G   ++ 
Sbjct: 239 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIR 298

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ ++  +CK G +  A  +L  M + GLKP++V Y+ L++GLC  ++  +  +L  EM
Sbjct: 299 MYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K    +      ++   C+  ++       + +++  C+ DV+ Y  +I+G+ K G I
Sbjct: 359 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLI 418

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EAV L + +      P+ +++  ++ G C   +  DA  L+  +   G   + +T+ T 
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N  C++G +++ + LL++M      P  ++Y+ VI GL K  K  EA++LL  M   G+
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +P+ I Y++I  +  +   + K  Q+ + +    +   +  YN +I  LC  G+ + A  
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            L  +        +  YT +I+   +EG V +A     ++  KG
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 258/542 (47%), Gaps = 23/542 (4%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           NA+++ YC+ G  E A+    L     + P+A++Y  ++  LC  G + +AL   ++M R
Sbjct: 94  NAMVAGYCRAGQLESARR---LAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPR 150

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            G  P    Y ++ +          A +V++ L  +G   D+    +++   C  G+V++
Sbjct: 151 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDK 210

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            L L   + S G + +V++Y+ +L  +C + R      L+ EM  +   P++VT++ LI 
Sbjct: 211 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLIS 270

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
            LC+     +  ++  +M     +P+   +  I+ G+C++  +  A    + +       
Sbjct: 271 YLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKP 330

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           +VV YN ++ G        E  +L  ++ +K      VTFN L+  FC+NG V     LL
Sbjct: 331 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELL 390

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           + + +HG  P  +TYTT +N +C+EG I   + LL+ M      P  ++YT+V+KGLC  
Sbjct: 391 EQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSA 450

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            +  +A  L+  M   G   + IT+NT+I   CK   + +A +LL QM ++   P   +Y
Sbjct: 451 ERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 510

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           + +IDGL   G    A  LL  +    +S   + Y++I  A   EG ++K +    QM +
Sbjct: 511 STVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI----QMFD 566

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
              + +IR                 D  +   ++ +  + G+     E  A M+ SG +P
Sbjct: 567 NIQDTTIRS----------------DAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 610

Query: 642 DK 643
           ++
Sbjct: 611 NE 612



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 225/458 (49%)

Query: 52  DDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
           +D+       +V   ++V++ +C Q  +  A+  L++       P VVS NA++   C  
Sbjct: 181 EDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMA 240

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
                 + L   M++    P+  ++N LI  LC  G  E   E    M  HG  PD   Y
Sbjct: 241 KRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMY 300

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           + +  G      +  A +++ ++   G  P++V Y  L+ G C     EE  +L   M  
Sbjct: 301 ATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFD 360

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +   L+ + +++L+   C++G +D  + LL +M   G  PD++TY+ +I G CK+  + +
Sbjct: 361 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDE 420

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A+ L   M +    PN+ ++  +L GLC  E   +A      +I   C  + + +N +I+
Sbjct: 421 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN 480

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
              K G + +A++L +Q++    SP +++++++I G  K GK  +A  LL+ +   G+ P
Sbjct: 481 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSP 540

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + + Y++  +A   EG I +++ +   ++   I    V Y  VI  LCK+ + + A++ L
Sbjct: 541 NTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFL 600

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
             M   G  P++ TY  +IR       +++A ++L ++
Sbjct: 601 AYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 638



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/475 (24%), Positives = 211/475 (44%), Gaps = 23/475 (4%)

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y+ +  G+    Q+  A ++   + +    P+  TY  ++   C  G + + L + + M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVP---PNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +G       Y V+L + C+ G    A+ +L ++ A G   D+   ++++  +C Q  V 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           KA+ L  ++ S    P+  ++ A+L GLC  +     +   + ++   C  ++V +N +I
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
               + G      ++  Q+ E   +P I  + ++I G CK G +  A  +L+ +  +GL+
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+ V Y T +   C     +    LL EM  K      VT+ +++   C+   +   ++L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           LE M V G  PD ITY T+I  FCK   + +A  LL  M     +P + +Y I++ GLC 
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
                +A+ L+  + +    L  + + T+I   C +G V +A+    Q            
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ------------ 497

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                   ML NG  PD      ++    + G      EL  VM+  G+ P+  +
Sbjct: 498 --------MLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII 544



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 211/443 (47%), Gaps = 3/443 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G V  A+ ++  +     +  + +YN++L  L   +    + +L +++     P N+ T 
Sbjct: 206 GSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTF 265

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I  LC+    +     L + A     P +     I+   CK G  +VA  +   M  
Sbjct: 266 NTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPS 325

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           YGL P+   YN L+ GLC A   EE  E   +M       D +T++IL   F     +  
Sbjct: 326 YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDR 385

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
             ++++++L+ G  PD++TYT +I G+C+ G ++E + L + M + G K N I+Y+++L 
Sbjct: 386 VIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 445

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C + R  +A  L+ +M   G   + +T++ LI  LCK+  V +AI+L  +M     SP
Sbjct: 446 GLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 505

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +  ++  ++ GL +     EA    + ++      + ++Y+ +     + G I + +Q++
Sbjct: 506 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMF 565

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             + +  I    V +N++I   CK G+   A   L  +   G  P+  TYT  +     E
Sbjct: 566 DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASE 625

Query: 427 GNIQRLLALLQEMETKAIGPTHV 449
           G ++    +L E+ +K     H+
Sbjct: 626 GFVKEAQEMLTELCSKGALRKHL 648


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 147/586 (25%), Positives = 275/586 (46%), Gaps = 52/586 (8%)

Query: 33  TYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           T+NSL+     T   D+  DL+D + +    ++V + + +I+GLC+  R+ +A+    E 
Sbjct: 12  TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM 71

Query: 90  AG-----------------------------KEFG--PSVVSLNAIMSRYCKLGFAEVAK 118
                                          KE G  PS  +  A++   C+   A+ A+
Sbjct: 72  DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAE 131

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +   M + GL P   +   +I+  C  G M +AL     M   G +P+  TY+ L +GF
Sbjct: 132 EMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGF 191

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               ++  A  ++ K+   G +PD VTY +LI G C  G++E   +L  +M   G   + 
Sbjct: 192 CNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQ 251

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+ L++++CK GR D+A  L   +E  G+KP+ VT++ LI GLCK  K   A +   +
Sbjct: 252 YTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEK 311

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M S   +P+++ + + +  LC+ +   E   +   ++  +     V Y I+I   +K  N
Sbjct: 312 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN 371

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
            G   + + +++    +P +VT+ + +  +C  G++ +A  +L  +  +G+    + Y T
Sbjct: 372 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 431

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            M+ +   G     +++L++M + A  P   TY ++++ L +       ++L+ED  V+ 
Sbjct: 432 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVR-------MRLVED--VLP 482

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           +TP  +          K  +L   F L + M  +   P S TY+ +++G   +G  + A 
Sbjct: 483 LTPAGVW---------KAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEAT 533

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            L+  ++E +ISL +  YT ++   C       A    C M++ GF
Sbjct: 534 SLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGF 579



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/541 (27%), Positives = 252/541 (46%), Gaps = 7/541 (1%)

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           + P   + N+++  YC+    +VA+ LF  M   G   D  SY  LI GLC AG ++EA+
Sbjct: 6   WRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAV 65

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           E   +M     +PD   Y+ L KG     +      +++++   G  P    Y  ++   
Sbjct: 66  ELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFR 121

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+    +E  ++ + M  +G    V+  + ++++ CK GR+ +AL +L  M+  G KP++
Sbjct: 122 CRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNV 181

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            TY+ L++G C + KVHKA+ L N+M +  ++P++  +  ++ G C    I  A      
Sbjct: 182 WTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRL 241

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +     I D   YN +I+   K G   +A  L+  L  + I P+ VTFNSLI G CK+GK
Sbjct: 242 MEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGK 301

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
              A + L+ +   G  P   TY++F+   C+    Q  L+ + EM  K + P+ V YT+
Sbjct: 302 ADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTI 361

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           VI  L K+       +   +M   G  PD +TY T +R++C    L +A  +L +M  + 
Sbjct: 362 VIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 421

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           +   +  YN L+DG    G   +A  +L  +        +  Y  +++       V   +
Sbjct: 422 VTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVL 481

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
                 V K  E++        F +M  N F P+      +L  F + G       L ++
Sbjct: 482 PLTPAGVWKAIELTD---VFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSL 538

Query: 634 M 634
           M
Sbjct: 539 M 539



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 220/439 (50%), Gaps = 14/439 (3%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M R G  PDA T++ L  G+   +Q+  A  +  K+ ++G   D+V+Y  LI G C+ G 
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           ++E ++L   M      +    Y+ L+  +C + R +E L +L  M+ +G +P    Y+ 
Sbjct: 61  IDEAVELFGEMDQPDMHM----YAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           ++   C++ K  +A ++  EM  K ++P      A++   C++  +++A    + + +  
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           C  +V  YN ++ G+   G + +A+ L  ++    ++P  VT+N LI G C +G +  A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           RLL  ++  GL     TY   +NA C++G   +  +L   +ET+ I P  VT+  +I GL
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK  K   A + LE M   G TPD  TY++ I   CK K  ++    + +M   +++P++
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 356

Query: 519 ATYNILIDGLCVNGDLKNADCLLVS-----LQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
             Y I+I  L     LK  +  LV+     +     +   V YTT ++A+C EG +++A 
Sbjct: 357 VNYTIVIHKL-----LKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAE 411

Query: 574 TFFCQMVEKGFEISIRDYT 592
               +M + G  +    Y 
Sbjct: 412 NVLMEMSKNGVTVDTMAYN 430



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 218/457 (47%), Gaps = 4/457 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M++ G  PDA+++N LI G C    ++ A +  + M   G   D ++Y+ L +G     +
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I  A ++  ++      PD+  Y  L+ G C     EEGL +   M   G++ +  AY+ 
Sbjct: 61  IDEAVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++   C+  +  EA  +L EM   GL P +VT + +I   CK+ ++  A+++   M  + 
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             PN + + A++ G C +  + +A    + +       D V YN++I G    G+I  A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L R +    +     T+N+LI   CK+G+   A  L D+++  G++P+AVT+ + +N  
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ G        L++M +    P   TY+  I+ LCK    QE +  + +M    V P  
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 356

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           + Y  +I    K ++     +   +M      P   TY   +   C+ G L  A+ +L+ 
Sbjct: 357 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLME 416

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           + ++ +++  +AY T++  H + G    A++   QM 
Sbjct: 417 MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 453



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 260/605 (42%), Gaps = 55/605 (9%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIV 69
           G + +AV +  +M + D+ +       L    R  + +  L    ++   P +    + V
Sbjct: 59  GRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRP-STRAYAAV 117

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           +D  C++ + ++A   LQE   K   P VV+  A+++ YCK G    A  +  LM   G 
Sbjct: 118 VDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC 177

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P+ ++YN L+ G C  G + +A+   N M   GV PDA+TY++L +G  +   I  A++
Sbjct: 178 KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFR 237

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           +++ +   G   D  TY  LI   C+ G  ++   L + + ++G K N + ++ L++ +C
Sbjct: 238 LLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLC 297

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           KSG+ D A   L +M + G  PD  TYS  I  LCK     + +    EM  K + P++ 
Sbjct: 298 KSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTV 357

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY----------------------- 346
            +  ++  L ++         +  ++ S C  DVV Y                       
Sbjct: 358 NYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEM 417

Query: 347 ------------NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY-------- 386
                       N ++DG+  +G    AV + +Q+      P+  T+  L+         
Sbjct: 418 SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLV 477

Query: 387 ---------GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
                    G  K  ++ D   L D +K +   P++ TY++ +  + E+G  +   +L+ 
Sbjct: 478 EDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVS 537

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF-CKC 496
            M+  +I      YT ++   CK  +  +A  L+  M   G  P  ++Y  ++    C+ 
Sbjct: 538 LMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEG 597

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
           +  +     +N  W  +  P    + ++IDGL   G    +  +++ L+  N   +   Y
Sbjct: 598 QTDKAKEIFMNSRW-KDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTY 656

Query: 557 TTIIK 561
             + +
Sbjct: 657 AMLTE 661



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 208/434 (47%), Gaps = 19/434 (4%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M+  G++ +   ++ L+   C++ ++D A  L  +M   G   D+V+Y+ LI GLC+  +
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + +A++L+ EM      P+   + A++ GLC  E   E  +    +           Y  
Sbjct: 61  IDEAVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           ++D   +     EA ++ +++ EK ++P +VT  ++I  +CK G+++DA R+L+ +KL G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
            +P+  TY   +  +C EG + + + LL +M    + P  VTY ++I+G C    ++ A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +LL  M   G+  DQ TYN +I + CK     +A  L + +    ++P + T+N LI+GL
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C +G    A   L  +     +     Y++ I+  C      + ++F  +M++K  + S 
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 356

Query: 589 RDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
            +YT                  +  M+S+G  PD       + A+   G L     +   
Sbjct: 357 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLME 416

Query: 634 MIKSGLLPDKFLIN 647
           M K+G+  D    N
Sbjct: 417 MSKNGVTVDTMAYN 430



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 215/483 (44%), Gaps = 40/483 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           +   G VH A+ ++ KM+   +     TYN L+       H +  + L   ++      +
Sbjct: 191 FCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIAD 250

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            YT + +I+ LC+  R   A         +   P+ V+ N++++  CK G A++A     
Sbjct: 251 QYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLE 310

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL------AK 176
            M+  G  PD ++Y+  I  LC     +E L F  +M +  V+P  + Y+I+       +
Sbjct: 311 KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKER 370

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            + L+++  G      +++  G +PD+VTYT  +  YC  G + E   +   M   G  +
Sbjct: 371 NYGLVARTWG------EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 424

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD--------- 287
           + +AY+ L+      G+ D A+ +L +M +V   P+  TY IL+R L +           
Sbjct: 425 DTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLT 484

Query: 288 --KVHKAIQL------YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
              V KAI+L      ++ M      PNS  + +IL G  E     EA     SL+  + 
Sbjct: 485 PAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLV-SLMKEDS 543

Query: 340 IQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           I  +  +Y  ++  + K     +A  L   +I+    P ++++  L+ G    G+   A+
Sbjct: 544 ISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAK 603

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEG--NIQR-LLALLQEMETKAIGPTHVTYTVVI 455
            +    +     P  + +   ++   ++G  +I R ++ +L+ M  +   P+H TY ++ 
Sbjct: 604 EIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCR---PSHQTYAMLT 660

Query: 456 KGL 458
           + L
Sbjct: 661 EEL 663


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 158/653 (24%), Positives = 289/653 (44%), Gaps = 54/653 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           RT  + DA  VIA M+ L  + +   Y  L+  +   R  +   +L   ++       V 
Sbjct: 159 RTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVP 218

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             + ++  L ++ R++ A+  + E  G    P +V  N  +  + K G  ++A   F  +
Sbjct: 219 LFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL 278

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              GL PD  SY  +I  LC AG + EA E    M      P A  Y+ +  G+    Q 
Sbjct: 279 KSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQF 338

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A+K++ +L  +G  P +V++  ++    +   V+E L L E M  +  + N   Y+++
Sbjct: 339 ENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDAEPNSSTYNII 397

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +C +G+++EA  +  EME  GL P+L+T +I++  LCK  K   A +++     +  
Sbjct: 398 IDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGC 457

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLI----------------------------- 335
           +PNS  + +++ GL +K  + +A   F++++                             
Sbjct: 458 NPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHK 517

Query: 336 ------MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
                    C  D+ L N  +D   K G++ +   ++  +      P + +++ LI+G  
Sbjct: 518 IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLT 577

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K G+  +   +   +K  G    A  Y   ++ +C+ G + +   +L+EM+ K + PT  
Sbjct: 578 KAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVA 637

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY  +I GL K  +L EA  L E+    G+  + I Y+++I  F K   + +A+ +L +M
Sbjct: 638 TYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEM 697

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               L P   T+N L+D L    ++  A     S++E   S     Y+ +I   C     
Sbjct: 698 MKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 757

Query: 570 HKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPD 607
           +KA  F+ +M ++G   ++  YT                S F    +NG  PD
Sbjct: 758 NKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPD 810



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 253/509 (49%), Gaps = 4/509 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y   G   +A  ++ ++KE     S+ ++NS+L  L   R  D    L++ +K    P N
Sbjct: 332 YGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEP-N 390

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T +I+ID LC   ++++A +   E       P+++++N ++ R CK    E A  +F 
Sbjct: 391 SSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFE 450

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
              + G +P++ +Y  LI GL   G++++A     +M   G   + + Y+ L + F +  
Sbjct: 451 TASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHG 510

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +     K+ +++  +G  PD+      +    + G+VE+G  + E +   GF  +V +YS
Sbjct: 511 RKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYS 570

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L+  + K+G+  E   + + M+  G   D   Y+ ++ G CK  K+ KA ++  EM  K
Sbjct: 571 ILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVK 630

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
           R+ P    +G+I+ GL + + + EA M F+         +V++Y+ +IDG+ K+G I EA
Sbjct: 631 RVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEA 690

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             +  ++++K ++P++ T+NSL+    K  ++ +A     ++K     P+  TY+  +N 
Sbjct: 691 YLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILING 750

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C      +     QEM+ + + P  VTYT +I GL K   + +A  L E     G TPD
Sbjct: 751 LCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPD 810

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             ++N +I          +A+ +  +  L
Sbjct: 811 AASFNALIEGMSHANRAIEAYHVFEETRL 839



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/587 (24%), Positives = 275/587 (46%), Gaps = 4/587 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNV-- 63
           + + G V  A     ++K   LK    +Y S+++ L     + +  +     ET R V  
Sbjct: 262 FGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPC 321

Query: 64  -YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            Y  + +I G     + ++A   L +   +   PSVVS N+I++   K    + A  LF 
Sbjct: 322 AYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFE 381

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K    P++ +YNI+I  LC+AG +EEA    ++M   G+ P+ +T +I+        
Sbjct: 382 AM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAK 440

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A+++ +    +G +P+ VTY  LI G  + GNV++  +L E ML  G   N + Y+
Sbjct: 441 KFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYT 500

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+ +    GR ++   +  EM   G +PDL   +  +  + K   V K   ++ ++   
Sbjct: 501 SLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGY 560

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P+  ++  ++ GL +     E    F ++       D   YN ++DG+ K G + +A
Sbjct: 561 GFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKA 620

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            ++  ++  KR+ P++ T+ S+I G  K  ++ +A  L +  K  G+E + + Y++ ++ 
Sbjct: 621 YEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDG 680

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           + + G I     +L+EM  K + P   T+  ++  L K  ++ EA+   + M  +  +P+
Sbjct: 681 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPN 740

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             TY+ +I   C+ +   KAF    +M    L P   TY  +I GL   G++ +A  L  
Sbjct: 741 TYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFE 800

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             + +  +    ++  +I+         +A   F +   KG  I+++
Sbjct: 801 RFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVK 847



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/555 (23%), Positives = 245/555 (44%), Gaps = 36/555 (6%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++  L +  RL DA   +      +F P+  +   ++    +    E A  L   M + G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
                  +  L+  L   G +E AL   +++    +EPD + Y++    F     +  AW
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 189 KVIQKLLIKGSDPDIVTYT-----------------------------------VLICGY 213
           K   +L  +G  PD V+YT                                    +I GY
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
              G  E   KL + +  +G   +V++++ +L+ + K  ++DEAL L   M+    +P+ 
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK-DAEPNS 391

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            TY+I+I  LC   KV +A  + +EM    + PN      ++  LC+ +    A   F++
Sbjct: 392 STYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFET 451

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
                C  + V Y  +IDG  K GN+ +A +L+  +++   + + V + SLI  F  +G+
Sbjct: 452 ASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGR 511

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
             D  ++   +   G +P      T+M+   + G++++  A+ ++++     P   +Y++
Sbjct: 512 KEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSI 571

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I GL K  + +E   +   M   G   D   YN ++  FCK   L KA+++L +M +  
Sbjct: 572 LIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKR 631

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           + PT ATY  +IDGL     L  A  L    +   I L  + Y+++I      G + +A 
Sbjct: 632 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAY 691

Query: 574 TFFCQMVEKGFEISI 588
               +M++KG   ++
Sbjct: 692 LILEEMMKKGLTPNV 706



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 228/523 (43%), Gaps = 31/523 (5%)

Query: 130 HP-DAFSYN----ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           HP  A +YN     L H L    +ME+ LE  + +G +GV   A   + L        ++
Sbjct: 110 HPLPADAYNAVLPFLSHDL---AAMEKVLEEMSVLG-YGVPNPAC--ADLVSALVRTRRL 163

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +VI  +      P    YTVLI    +    E  L+L   M   G+++ V  ++ L
Sbjct: 164 DDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTL 223

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           + ++ + GR++ AL L+ E++   L+PD+V Y++ I    K   V  A + ++E+ S+ +
Sbjct: 224 VRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGL 283

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+  ++ +++  LC+   ++EA   F  +     +     YN MI GY   G    A +
Sbjct: 284 KPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYK 343

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L  QL E+   PS+V+FNS++    K  KV +A  L + +K    EP++ TY   ++  C
Sbjct: 344 LLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNSSTYNIIIDMLC 402

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             G ++    +  EME   + P  +T  +++  LCK  K + A ++ E     G  P+ +
Sbjct: 403 MAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSV 462

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMW--LHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           TY ++I    K  ++  A++L   M    HN  P    Y  LI    ++G  ++   +  
Sbjct: 463 TYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPV--VYTSLIRNFFMHGRKEDGHKIFK 520

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY----------- 591
            +             T +      GDV K    F  +   GF   +R Y           
Sbjct: 521 EMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAG 580

Query: 592 ----TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
               T S F  M   GF  D      ++  F + G L   +E+
Sbjct: 581 QARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEV 623



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 139/289 (48%), Gaps = 3/289 (1%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNV 63
           ++ G   +   +   MK+    +  + YN+++     +   D  +++ +++KV   P  V
Sbjct: 577 TKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTV 636

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T   +IDGL +  RL +A +  +E   K    +V+  ++++  + K+G  + A  +   
Sbjct: 637 ATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEE 696

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+K GL P+ +++N L+  L  A  + EAL     M      P+  TYSIL  G   + +
Sbjct: 697 MMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 756

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
            + A+   Q++  +G  P++VTYT +I G  ++GN+ +   L E   + G   +  +++ 
Sbjct: 757 YNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNA 816

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           L+  M  + R  EA  +  E    G + ++     L+  L K + + +A
Sbjct: 817 LIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQA 865



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 119/259 (45%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           V+DG C+  +L  A   L+E   K   P+V +  +I+    K+   + A  LF      G
Sbjct: 607 VVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKG 666

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           +  +   Y+ LI G    G ++EA     +M + G+ P+  T++ L        +I+ A 
Sbjct: 667 IELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEAL 726

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
              Q +      P+  TY++LI G C++    +     + M  QG   NV+ Y+ +++ +
Sbjct: 727 ICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGL 786

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
            K G I +A  L    +A G  PD  +++ LI G+   ++  +A  ++ E   K    N 
Sbjct: 787 AKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINV 846

Query: 309 FAHGAILLGLCEKEMITEA 327
            A  ++L  L + E + +A
Sbjct: 847 KACISLLDALNKAECLEQA 865


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 230/432 (53%), Gaps = 4/432 (0%)

Query: 83  ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
           ++ + E  GK   P V + NA++S +CK    E AK +   M + G  PD  ++NI+I  
Sbjct: 32  VMGILEKHGK---PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGT 88

Query: 143 LCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
            C  G ++ AL+ F   +  +  +P  ITY+IL + + L   I  A K++ ++L +G +P
Sbjct: 89  FCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEP 148

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D  TY V+  G C+ G V+   +    + S+G K +VI Y++LL ++   G+ DE    +
Sbjct: 149 DTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWM 208

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            E+ + G +P++VTYSILI  LC+  K+ +++ L   M  K ++P+++ +  ++   C +
Sbjct: 209 SEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCRE 268

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             +  A  + D +I    + D+V YN ++    K GN   AV+++ +L E    P++ ++
Sbjct: 269 GKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSY 328

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N+++     +G    A  ++  +   G++P  +TY + ++  C +G +   + LL +M +
Sbjct: 329 NTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLS 388

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
               P  V+Y  V+ GLCK  ++ +A+++L  M   G  P++ TY  +I          +
Sbjct: 389 GRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQ 448

Query: 502 AFQLLNQMWLHN 513
           A +L N +++ N
Sbjct: 449 AMELANSLYIMN 460



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 224/448 (50%), Gaps = 2/448 (0%)

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
            K++ P V+    ++  +      + A  +  ++ K+G  PD F+YN +I G C A  +E
Sbjct: 3   AKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIE 61

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTYTVL 209
            A    + M R G  PD +T++I+   F    +I  A KV ++LL   +  P ++TYT+L
Sbjct: 62  SAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTIL 121

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I  Y   G ++E LKL + MLS+G + +   Y+V+   +CK G++D A   +  + + G 
Sbjct: 122 IEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGC 181

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           KPD++TY+IL+R L  Q K  +  +  +E+ S+   PN   +  ++  LC    I E+  
Sbjct: 182 KPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVN 241

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               +       D   Y+ +I  + + G +  A++    +I     P IV +N+++   C
Sbjct: 242 LVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALC 301

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           KNG    A  +   +   G  P+  +Y T ++A    G+  R L ++ +M +K I P  +
Sbjct: 302 KNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVI 361

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY  +I  LC+   + EA+ LL DM      P+ ++Y T++   CK   +  A ++L  M
Sbjct: 362 TYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAM 421

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNA 537
             +  +P   TY +LI+G+  +G    A
Sbjct: 422 IENGCQPNETTYTLLIEGIGFSGSRTQA 449



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 225/447 (50%), Gaps = 12/447 (2%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+  + VI G C+ +R++ A   L     K F P VV+ N ++  +C  G  ++A  +F
Sbjct: 43  DVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVF 102

Query: 122 CLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             +LK     P   +Y ILI    + G ++EAL+  ++M   G+EPD  TY+++ +G   
Sbjct: 103 EELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCK 162

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             ++  A++ ++ L  +G  PD++TY +L+      G  +EG K    + S+G + NV+ 
Sbjct: 163 EGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVT 222

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS+L+SS+C+ G+I+E++ L+  M+  GL PD   Y  LI   C++ K+  AI+  + M 
Sbjct: 223 YSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMI 282

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
                P+   +  I+  LC+      A   F  L    C  +V  YN M+      G+  
Sbjct: 283 CDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRY 342

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A+ +  Q++ K I P ++T+NSLI   C++G V +A  LL  +     +P+ V+Y T +
Sbjct: 343 RALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVL 402

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
              C+   I   + +L  M      P   TYT++I+G+       +A++L   +Y++   
Sbjct: 403 LGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAI 462

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLN 507
            +         SF   K L K F LL+
Sbjct: 463 SED--------SF---KRLNKTFPLLD 478



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 213/429 (49%), Gaps = 2/429 (0%)

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
           +PD I  + L KGF     I  A +V+  +L K   PD+  Y  +I G+C+   +E    
Sbjct: 7   QPDVILCTKLIKGFFNSRNIDKATRVMG-ILEKHGKPDVFAYNAVISGFCKANRIESAKT 65

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGL 283
           + + M  +GF  +V+ +++++ + C  G+ID AL +  E+ +    KP L+TY+ILI   
Sbjct: 66  VLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAY 125

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
             +  + +A++L +EM S+ + P++F +  I  GLC++  +  A  +  +L    C  DV
Sbjct: 126 ILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDV 185

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           + YNI++   +  G   E  +   ++  +   P++VT++ LI   C++GK+ ++  L+  
Sbjct: 186 ITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKV 245

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +K  GL P A  Y   + A+C EG +   +  L  M      P  V Y  ++  LCK   
Sbjct: 246 MKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGN 305

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
              AV++   +  +G  P+  +YNT++ +     D  +A  +++QM    ++P   TYN 
Sbjct: 306 GDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNS 365

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           LI  LC +G +  A  LL  +         V+Y T++   C    +  A+     M+E G
Sbjct: 366 LISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENG 425

Query: 584 FEISIRDYT 592
            + +   YT
Sbjct: 426 CQPNETTYT 434



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 220/451 (48%), Gaps = 2/451 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+     PD      LI G   + ++++A      + +HG +PD   Y+ +  GF   ++
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML-SQGFKLNVIAYS 242
           I  A  V+ ++  KG  PD+VT+ ++I  +C  G ++  LK+ E +L     K  +I Y+
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L+ +    G IDEAL LL EM + GL+PD  TY+++ RGLCK+ KV +A +    + S+
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P+   +  +L  L  +    E   +   +    C  +VV Y+I+I    + G I E+
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           V L + + EK ++P    ++ LI  FC+ GK+  A   LD +   G  P  V Y T M A
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAA 299

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+ GN    + +  +++     P   +Y  ++  L        A+ ++  M   G+ PD
Sbjct: 300 LCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPD 359

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            ITYN++I   C+   + +A  LL  M     +P   +Y  ++ GLC    + +A  +L 
Sbjct: 360 VITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLA 419

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           ++ E+     +  YT +I+     G   +AM
Sbjct: 420 AMIENGCQPNETTYTLLIEGIGFSGSRTQAM 450



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 210/431 (48%), Gaps = 17/431 (3%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M+++ ++ +VI  + L+     S  ID+A  ++  +E  G KPD+  Y+ +I G CK ++
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM-SNCIQDVVLYN 347
           +  A  + + M  K  SP+   H  ++   C K  I  A   F+ L+  +NC   ++ Y 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           I+I+ Y+  G I EA++L  +++ + + P   T+N +  G CK GKV  A   + T+   
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G +P  +TY   + A   +G        + E+ ++   P  VTY+++I  LC+  K++E+
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           V L++ M   G+TPD   Y+ +I +FC+   L  A + L+ M      P    YN ++  
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAA 299

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC NG+  +A  +   L E        +Y T++ A  + GD ++A+    QM+ KG +  
Sbjct: 300 LCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPD 359

Query: 588 IRDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
           +  Y     C+               MLS  F P+    + +L+   +   +    E+ A
Sbjct: 360 VITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLA 419

Query: 633 VMIKSGLLPDK 643
            MI++G  P++
Sbjct: 420 AMIENGCQPNE 430



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 151/322 (46%), Gaps = 16/322 (4%)

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           DV  YN +I G+ K   I  A  +  ++  K  SP +VT N +I  FC  GK+  A ++ 
Sbjct: 43  DVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVF 102

Query: 402 DTI-KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           + + K +  +P+ +TYT  + AY  EG I   L LL EM ++ + P   TY V+ +GLCK
Sbjct: 103 EELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCK 162

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
           + K+  A + +  +   G  PD ITYN ++R+        +  + +++++    EP   T
Sbjct: 163 EGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVT 222

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y+ILI  LC +G ++ +  L+  ++E  ++     Y  +I A C EG +  A+ F   M+
Sbjct: 223 YSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMI 282

Query: 581 EKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
             GF   I +Y                   F  +   G PP+      ML A    GD  
Sbjct: 283 CDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRY 342

Query: 626 SVFELAAVMIKSGLLPDKFLIN 647
               + + M+  G+ PD    N
Sbjct: 343 RALGMISQMLSKGIDPDVITYN 364



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/403 (22%), Positives = 192/403 (47%), Gaps = 4/403 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDI-KVSETPR 61
           + +   +  A  V+ +MK       + T+N ++         D+   +++++ K +    
Sbjct: 54  FCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKP 113

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            + T +I+I+    +  + +A+  L E   +   P   + N I    CK G  + A    
Sbjct: 114 TLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFV 173

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             +   G  PD  +YNIL+  L   G  +E  ++ +++   G EP+ +TYSIL       
Sbjct: 174 RTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRD 233

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  +  +++ +  KG  PD   Y  LI  +C+ G ++  ++  + M+  GF  +++ Y
Sbjct: 234 GKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNY 293

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +++++CK+G  D A+ +  +++ VG  P++ +Y+ ++  L      ++A+ + ++M S
Sbjct: 294 NTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLS 353

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K I P+   + +++  LC   M+ EA      ++      ++V Y  ++ G  K   I +
Sbjct: 354 KGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDD 413

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           A+++   +IE    P+  T+  LI G   +G    A  L +++
Sbjct: 414 AIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 172/369 (46%), Gaps = 11/369 (2%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
            Y   G + +A+ ++ +M    L+    TYN +   L      D  ++    +       
Sbjct: 124 AYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKP 183

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T +I++  L  Q +  +   ++ E   +   P+VV+ + ++S  C+ G  E +  L 
Sbjct: 184 DVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLV 243

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M + GL PDA+ Y+ LI   C  G ++ A+EF + M   G  PD + Y+ +       
Sbjct: 244 KVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKN 303

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
                A ++  KL   G  P++ +Y  ++      G+    L +   MLS+G   +VI Y
Sbjct: 304 GNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITY 363

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+S +C+ G +DEA+GLL +M +   +P++V+Y  ++ GLCK  ++  AI++   M  
Sbjct: 364 NSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIE 423

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               PN   +  ++ G+      T+A    +SL + N I +        D + +L     
Sbjct: 424 NGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISE--------DSFKRLNKTFP 475

Query: 362 AVQLYRQLI 370
            + +Y+  I
Sbjct: 476 LLDVYKGFI 484


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 228/468 (48%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           +DL++  +       V+  + +ID L      + A L  ++   K       + N ++  
Sbjct: 50  FDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRY 109

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           + + G  + A  +F  M   G  PD ++Y  L++ L  AG ++EA  F + M   G+ P+
Sbjct: 110 FGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPN 169

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
             TY++L   F  + Q+  A  +  ++  +G  P +VTY +L+   C  G V    KL  
Sbjct: 170 IPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFH 229

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M   G   +   YS L++ + KSGR++EA  +  EM   G+  DLV Y+ L+  L K  
Sbjct: 230 KMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAG 289

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
            + +  +L  EM  K   P++F+   I+  L +      AR  F  ++ S C  D++ YN
Sbjct: 290 NMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYN 349

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           I+ID Y + G+  +A Q+  +++E    P   T+NSLI+    +G+V +A  +L+ ++  
Sbjct: 350 ILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA 409

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G  P  VTY   M+   + G  QR   L Q+M+ K + P  ++Y V I GL    +L EA
Sbjct: 410 GCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEA 469

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           + L +DM  +G   D+  Y  +IR+  +  D     QL ++     +E
Sbjct: 470 LVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQFMPVE 517



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 232/480 (48%), Gaps = 2/480 (0%)

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
           G+   P+  +L  +++ Y +   +  A  LF     +   P   ++  LI  L  +G  E
Sbjct: 25  GRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFE 82

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            A      + + G + D   Y++L + F    Q+  A ++ +++ IKGS+PD  TY  L+
Sbjct: 83  RAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLV 142

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
               + G V+E     + ML +G   N+  Y++L+ +  K G++D ALGL  EM+  G +
Sbjct: 143 NALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQ 202

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P +VTY+IL+  LC   +V  A +L+++M     SP+S+ +  ++ GL +   + EA   
Sbjct: 203 PSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKV 262

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           F  ++      D+V YN ++    K GN+    +L +++  K   P   +FN+++    K
Sbjct: 263 FREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGK 322

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
             K   AR +   +   G +P  ++Y   +++Y   G+  +   +L+EM      P   T
Sbjct: 323 ANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKT 382

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  +I  L    ++ EA  +LE+M   G  PD +TYN ++    K  + ++A +L  QM 
Sbjct: 383 YNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMK 442

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              +EP + +Y + IDGL  +  L  A  L   ++     + K  Y  +I+A    GD  
Sbjct: 443 DKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 201/425 (47%), Gaps = 3/425 (0%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYT 65
           +G    A  V  K+ +   ++    YN L+     +   D   +++ ++K+  +  + YT
Sbjct: 78  SGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYT 137

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
              +++ L +  R+Q+A  F      +   P++ + N +M  + K+G  ++A GLF  M 
Sbjct: 138 YGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMK 197

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G  P   +YNIL+  LC AG +  A +  + M   G  PD+ TYS L  G     ++ 
Sbjct: 198 RRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVE 257

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A KV ++++ +G   D+V Y  L+    + GN++   KL + M  +GF  +  +++ ++
Sbjct: 258 EAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIM 317

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
            ++ K+ + D A  +   M   G KPDL++Y+ILI    +     +A Q+  EM      
Sbjct: 318 DALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFI 377

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P +  + +++  L     + EA    + +  + C  DVV YN ++D   K G    A +L
Sbjct: 378 PETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARL 437

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           ++Q+ +K + P  +++   I G   + ++ +A  L   +K  G       Y   + A   
Sbjct: 438 FQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHR 497

Query: 426 EGNIQ 430
            G+ +
Sbjct: 498 AGDTE 502



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/484 (23%), Positives = 208/484 (42%), Gaps = 50/484 (10%)

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           ++++++ +G      T   LI  Y +     +   L     S      V A++ L+  + 
Sbjct: 17  LLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILV 76

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
            SG  + A  +  ++   G + D   Y++LIR   +  ++  A++++ EM  K   P+ +
Sbjct: 77  NSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEY 136

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            +G ++  L +   + EAR +FD+++      ++  YN+++D + K+G +  A+ L+ ++
Sbjct: 137 TYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEM 196

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA------- 422
             +   PS+VT+N L+   C  G+V  AR+L   +   G  P + TY+T +N        
Sbjct: 197 KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRV 256

Query: 423 ----------------------------YCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
                                         + GN+ R+  L++EM  K   P   ++  +
Sbjct: 257 EEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTI 316

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           +  L K  K   A ++   M   G  PD I+YN +I S+ +  D  +A Q+L +M     
Sbjct: 317 MDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGF 376

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P + TYN LI  L  +G +  A  +L  ++        V Y  ++      G+  +A  
Sbjct: 377 IPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAAR 436

Query: 575 FFCQMVEKGFEISIRDYTKS---------------FFCMMLSNGFPPDQEICEVMLIAFH 619
            F QM +KG E     Y                   F  M + G P D+ +  +++ A H
Sbjct: 437 LFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAH 496

Query: 620 QGGD 623
           + GD
Sbjct: 497 RAGD 500



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 167/365 (45%), Gaps = 32/365 (8%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           +L   + + G +  A+ + A+MK    + S+ TYN                         
Sbjct: 175 LLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYN------------------------- 209

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
                  I++D LC   R+  A     +  G    P   + + +++   K G  E A  +
Sbjct: 210 -------ILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKV 262

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M+  G+  D  +YN L+  L  AG+M+   +   +M R G  PDA +++ +      
Sbjct: 263 FREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGK 322

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
            ++   A +V  +++  G  PD+++Y +LI  Y + G+  +  ++ E M+  GF      
Sbjct: 323 ANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKT 382

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+  +   G++DEA  +L EME  G +PD+VTY+ L+  L K+ +  +A +L+ +M 
Sbjct: 383 YNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMK 442

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K + P++ ++   + GL   + + EA + F  +    C  D  +Y I+I    + G+  
Sbjct: 443 DKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502

Query: 361 EAVQL 365
              QL
Sbjct: 503 LEAQL 507



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/319 (22%), Positives = 143/319 (44%), Gaps = 15/319 (4%)

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           C   V  +  +ID  V  G    A  +Y++L++K        +N LI  F ++G++  A 
Sbjct: 61  CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAM 120

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            +   +K+ G EP   TY   +NA  + G +Q   +    M  + + P   TY +++   
Sbjct: 121 EMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAF 180

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
            K  +L  A+ L  +M   G  P  +TYN ++ + C    +  A +L ++M      P S
Sbjct: 181 RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDS 240

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TY+ L++GL  +G ++ A  +   + +  +++  V Y +++      G++ +      +
Sbjct: 241 YTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKE 300

Query: 579 MVEKGF---------------EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           M  KGF               + +  D  +  F  M+ +G  PD     +++ ++ + GD
Sbjct: 301 MSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGD 360

Query: 624 LGSVFELAAVMIKSGLLPD 642
                ++   M+++G +P+
Sbjct: 361 AAQARQMLEEMVEAGFIPE 379



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 137/337 (40%), Gaps = 26/337 (7%)

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
           KEM+ E R    + ++            +I  Y +    G+A  L+ Q      SP++  
Sbjct: 19  KEMVAEGRPLRPNTLVK-----------LITAYGRGNKSGDAFDLFNQAESFACSPTVHA 67

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           F  LI     +G+   A  +   +   G +     Y   +  +   G +   + + +EM+
Sbjct: 68  FTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMK 127

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            K   P   TY  ++  L K  ++QEA    + M   G+TP+  TYN ++ +F K   L 
Sbjct: 128 IKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLD 187

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
            A  L  +M     +P+  TYNIL+D LC  G +  A  L   +     S     Y+T++
Sbjct: 188 MALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLV 247

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM---------------MLSNGFP 605
                 G V +A   F +MV++G  + + +Y      +               M   GF 
Sbjct: 248 NGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFH 307

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           PD      ++ A  +     +  E+ A M++SG  PD
Sbjct: 308 PDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPD 344



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 123/294 (41%), Gaps = 38/294 (12%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVSETPRNVY 64
           ++G V +A  V  +M +  + V +  YNSLL  L    + D +W L  ++       + +
Sbjct: 252 KSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAF 311

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           + + ++D L + ++   A             P ++S N ++  Y + G A  A+ +   M
Sbjct: 312 SFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEM 371

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           ++ G  P+  +YN LIH L   G ++EA     +M   G  PD +TY+ L        + 
Sbjct: 372 VEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGEN 431

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++ Q++  KG +PD ++Y V I G                                
Sbjct: 432 QRAARLFQQMKDKGVEPDTLSYAVRIDG-------------------------------- 459

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
              +    R+DEAL L  +M+AVG   D   Y ILIR   +        QL +E
Sbjct: 460 ---LAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/236 (21%), Positives = 88/236 (37%), Gaps = 22/236 (9%)

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L P+  T    + AY           L  + E+ A  PT   +T +I  L    + + A 
Sbjct: 28  LRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAE 85

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            + + +   G   D+  YN +IR F +   L  A ++  +M +   EP   TY  L++ L
Sbjct: 86  LVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNAL 145

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
              G ++ A     ++ E  ++     Y  ++ A    G +  A+  F +M         
Sbjct: 146 GKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKR------- 198

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                         GF P      ++L A    G +G+  +L   M   G  PD +
Sbjct: 199 -------------RGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSY 241


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 242/494 (48%), Gaps = 43/494 (8%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P  F +  ++  L  A      +     M  +G+  + +T SIL   +  L Q + ++ V
Sbjct: 10  PSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSV 69

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              +L KG   D +T+T LI G C  G + + L   + +++QGFKLN ++Y  L++ +CK
Sbjct: 70  FANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCK 129

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            G+   AL  L  ++   ++PD+V Y+ +I GLCK   V+ A  LY EM +KRI P+   
Sbjct: 130 VGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVT 189

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ GLC    + +A      +I+ +    V  ++I+ID + K G + EA  ++  ++
Sbjct: 190 YNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMM 249

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDT-IKLHGLEPSAVTYTTFMNAYCEEGNI 429
           ++ + P+IVT+NSL+ G      V  A+ + +T IK+                      +
Sbjct: 250 KEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKM----------------------V 287

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
              + L +EM  K I P  V Y  +I GLCK  +   A++ + +M+  G  PD  TYN++
Sbjct: 288 DEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSL 347

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           + + CK   + KA +LL ++    ++P+  TYNILI+GLC +G LK+A+ +   L     
Sbjct: 348 LDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGY 407

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
           +     Y  +IK  C +G                    + D T +    M  +G  PD +
Sbjct: 408 NTDVYTYNAMIKGFCKKG--------------------LFDETLAMVSKMKDSGCSPDAK 447

Query: 610 ICEVMLIAFHQGGD 623
            CE+++ +    G+
Sbjct: 448 NCEIIIRSLFDKGE 461



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 230/437 (52%), Gaps = 21/437 (4%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           ++V+L+ +++ Y +LG   ++  +F  +LK G   DA ++  LI GLC+ G + +AL F 
Sbjct: 46  NLVTLSILINCYSQLGQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFH 105

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           + +   G + + ++Y  L  G   + Q   A + ++++  K   PD+V Y  +I G C+ 
Sbjct: 106 DKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKD 165

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
             V +   L   M+++    +V+ Y+ L+  +C   ++ +A+GLL++M    + P + T+
Sbjct: 166 KLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTF 225

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           SILI   CK+ K+ +A  ++  M  + + PN   + +++ G     ++ +A+  F+++I 
Sbjct: 226 SILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIK 285

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                       M+D         EA+ L+ ++  K+I P +V +NSLI G CK+G+   
Sbjct: 286 ------------MVD---------EAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPY 324

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A + +  +   G  P   TY + ++A C+  ++ + + LL +++ + I P+  TY ++I 
Sbjct: 325 ALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILIN 384

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLCK  +L++A ++ ED+ V G   D  TYN +I+ FCK     +   ++++M      P
Sbjct: 385 GLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSP 444

Query: 517 TSATYNILIDGLCVNGD 533
            +    I+I  L   G+
Sbjct: 445 DAKNCEIIIRSLFDKGE 461



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 208/458 (45%), Gaps = 25/458 (5%)

Query: 38  LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILF--LQETAGKEFG 95
           L    H  I+  L+  ++ +    N+ T SI+I+  C     Q+A+ F        K +G
Sbjct: 22  LVKANHYSIVVSLHRQMEFNGLASNLVTLSILIN--CYSQLGQNALSFSVFANILKKGYG 79

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
              ++   ++   C  G    A      ++  G   +  SY  LI+GLC  G    ALEF
Sbjct: 80  SDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEF 139

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              +    V+PD + Y+ +  G      ++ A+ +  +++ K   P +VTY  LICG C 
Sbjct: 140 LRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCI 199

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +  +++ + L   M+ +     V  +S+L+ + CK G++ EA  +   M    +KP++VT
Sbjct: 200 MAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVT 259

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ L+ G    + V KA  ++N M                      +M+ EA   F+ + 
Sbjct: 260 YNSLMDGHHLVNVVKKAKSIFNTMI---------------------KMVDEAMNLFEEMH 298

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D+V+YN +IDG  K G    A++   ++  +   P I T+NSL+   CKN  V 
Sbjct: 299 FKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVD 358

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  LL  +K  G++PS  TY   +N  C+ G ++    + +++  K       TY  +I
Sbjct: 359 KAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMI 418

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           KG CK+    E + ++  M   G +PD      IIRS 
Sbjct: 419 KGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSL 456



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 149/305 (48%), Gaps = 23/305 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKV------SETPR 61
           +  +V+DA  +  +M    +  S+ TYN+L+  L    IM  L D I +       +   
Sbjct: 164 KDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLC---IMAQLKDAIGLLHKMILEDINP 220

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            VYT SI+ID  C++ ++++A         ++  P++V+ N++M  +  +   + AK +F
Sbjct: 221 TVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIF 280

Query: 122 CLMLKY--------------GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
             M+K                ++PD   YN LI GLC +G    AL+F  +M   G  PD
Sbjct: 281 NTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPD 340

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
             TY+ L         +  A +++ KL  +G  P + TY +LI G C+ G +++  K+ E
Sbjct: 341 IFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFE 400

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            +L +G+  +V  Y+ ++   CK G  DE L ++ +M+  G  PD     I+IR L  + 
Sbjct: 401 DLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKG 460

Query: 288 KVHKA 292
           +  KA
Sbjct: 461 ENDKA 465



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 155/306 (50%), Gaps = 14/306 (4%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           ++LY ++       +V T + +I GLC  ++L+DAI  L +   ++  P+V + + ++  
Sbjct: 172 FNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDA 231

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG----------LCIAGSM----EEAL 153
           +CK G  + AK +F +M+K  + P+  +YN L+ G            I  +M    +EA+
Sbjct: 232 FCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAM 291

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
               +M    + PD + Y+ L  G     +   A K I ++  +G  PDI TY  L+   
Sbjct: 292 NLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDAL 351

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+  +V++ ++L   +  QG + +V  Y++L++ +CKSGR+ +A  +  ++   G   D+
Sbjct: 352 CKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDV 411

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            TY+ +I+G CK+    + + + ++M     SP++     I+  L +K    +A  + + 
Sbjct: 412 YTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKAGKFREM 471

Query: 334 LIMSNC 339
           ++   C
Sbjct: 472 IVRGKC 477



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 131/289 (45%), Gaps = 33/289 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + + G + +A  V A M + D+K +I TYNSL+          D +  + V +  ++++ 
Sbjct: 232 FCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLM----------DGHHLVNVVKKAKSIFN 281

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
             I +        + +A+   +E   K+  P +V  N+++   CK G    A      M 
Sbjct: 282 TMIKM--------VDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMH 333

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G  PD F+YN L+  LC    +++A+E    +   G++P   TY+IL  G     ++ 
Sbjct: 334 YRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLK 393

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A KV + LL+KG + D+ TY  +I G+C+ G  +E L +   M   G   +     +++
Sbjct: 394 DAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIII 453

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
            S+   G  D+A G   EM              ++RG C ++     I+
Sbjct: 454 RSLFDKGENDKA-GKFREM--------------IVRGKCHREAPASTIR 487



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 35/259 (13%)

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           L  K  +PSI  F  ++    K    +    L   ++ +GL  + VT +  +N Y + G 
Sbjct: 3   LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG---------- 478
                ++   +  K  G   +T+T +IKGLC + ++ +A+   + +   G          
Sbjct: 63  NALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGT 122

Query: 479 -------------------------VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
                                    V PD + YNTII   CK K +  AF L  +M    
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKR 182

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           + P+  TYN LI GLC+   LK+A  LL  +   +I+ T   ++ +I A C EG + +A 
Sbjct: 183 ICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAK 242

Query: 574 TFFCQMVEKGFEISIRDYT 592
             F  M+++  + +I  Y 
Sbjct: 243 NVFAVMMKEDVKPNIVTYN 261


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 143/554 (25%), Positives = 277/554 (50%), Gaps = 27/554 (4%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           D++ D++ S    N ++ +  I+GLC   R       LQ+    +    V +   ++  +
Sbjct: 240 DVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGF 299

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           C     + A+ +   M K G  PD + Y  LI G C+ G++ +AL   ++M   GV+ + 
Sbjct: 300 CSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNC 359

Query: 169 ITYSILAKGFH---LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           +  S + +G     + S+++  +K  +K+   G   D   Y V++   C++G VEE ++L
Sbjct: 360 VILSSILQGLSQMGMASEVANQFKEFKKM---GIFFDEACYNVVMDALCKLGKVEEAVEL 416

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
              M  +    ++I Y+ ++S     G++ +AL +  EM+ +G KPD+VTY++L  G  +
Sbjct: 417 LVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSR 476

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
                +A+ L N M ++ + P++  H  I+ GLC    + +A+ +FD+L    C+++   
Sbjct: 477 NGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNL-EEKCLEN--- 532

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y+ M++GY +  ++ +A  L  +L ++       +F  L+   C  G    A  LL+T+ 
Sbjct: 533 YSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMV 592

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
              + P+ + Y+  + A  + G +++   +   +  + + P  +TYT++I G C+  K++
Sbjct: 593 ALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMK 652

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM------------WLH- 512
           EA  +L DM   G+ PD ITY T++ + C   DLR +   L+ M            W   
Sbjct: 653 EAWHVLGDMKNRGIEPDVITY-TVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEM 711

Query: 513 ---NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
              +++P    Y +LID  C   ++++A  L   + +  ++   V YT ++  +C  G++
Sbjct: 712 KDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNI 771

Query: 570 HKAMTFFCQMVEKG 583
            KA+  F +M+ KG
Sbjct: 772 KKAVVLFDEMLNKG 785



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 171/612 (27%), Positives = 293/612 (47%), Gaps = 41/612 (6%)

Query: 38  LYNLRH-TDIMWDLYDDIKVSETPRNVYTNSIVIDGLC--QQSRLQDAILF--LQETAGK 92
           L NLR+   + +  ++ +K S    + YT + ++  LC    SR  D+IL   +++    
Sbjct: 66  LNNLRNEPSLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNL 125

Query: 93  EFGPSVVSL---------NAIMSRYCKLGFAE----VAKGLF------CLMLKY-GLHPD 132
           +FG  +V+L         N   S   ++  A     VA G+F       L  K+ G  P 
Sbjct: 126 DFG--IVNLFEALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQ 183

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
             S N L++ L  +  ++ A+     +   G+ P+  TY+I  KGF     ++ A  V +
Sbjct: 184 ILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFR 243

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
            +   G  P+  +YT  I G C  G  + G K+ + +++    ++V AY+V++   C   
Sbjct: 244 DMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEM 303

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           ++ EA  +L EME  G  PD+  Y  LI G C    + KA+ L++EM SK +  N     
Sbjct: 304 KLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILS 363

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           +IL GL +  M +E    F          D   YN+++D   KLG + EAV+L  ++  K
Sbjct: 364 SILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGK 423

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
           ++ P I+ + ++I G+   GKV DA  +   +K  G +P  VTY      +   G  Q  
Sbjct: 424 KMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEA 483

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L+LL  MET+ + P  VT+ ++I+GLC   K+ +A    +++    +      Y+ ++  
Sbjct: 484 LSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLE----NYSAMVNG 539

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
           +C+   + KAF LL ++         A++  L+  LC  GD + A CLL ++   NI+ T
Sbjct: 540 YCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPT 599

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE 612
            + Y+ +I A    G++ KA   F  +V++G    +  YT      ++ NG+    ++ E
Sbjct: 600 MIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYT------IMINGYCRMNKMKE 653

Query: 613 VMLIAFHQGGDL 624
               A+H  GD+
Sbjct: 654 ----AWHVLGDM 661



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 158/644 (24%), Positives = 281/644 (43%), Gaps = 107/644 (16%)

Query: 73  LCQQSRLQD-AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           +C  S + D A   L +T    F P ++S N +M+R  +    ++A  ++  +  +GL+P
Sbjct: 158 VCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNP 217

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           + ++Y I I G C  G++ EA++   DM   GV P++ +Y+   +G  L  +    +KV+
Sbjct: 218 NDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVL 277

Query: 192 QKLL-----------------------------------IKGSDPDIVTYTVLICGYCQI 216
           Q ++                                    +G  PD+  Y  LI GYC +
Sbjct: 278 QDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMV 337

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           GN+ + L L + M+S+G K N +  S +L  + + G   E      E + +G+  D   Y
Sbjct: 338 GNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACY 397

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           ++++  LCK  KV +A++L  EM  K++ P+   +  ++ G   K  + +A   +  +  
Sbjct: 398 NVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKD 457

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                D+V YN++  G+ + G   EA+ L   +  + + P  VT N +I G C  GKV D
Sbjct: 458 IGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDD 517

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCE------------------------------- 425
           A+   D ++   LE     Y+  +N YCE                               
Sbjct: 518 AQAFFDNLEEKCLE----NYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLG 573

Query: 426 ----EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
               EG+ ++ L LL+ M    I PT + Y+ VI  L +  ++++A  +   +   G+ P
Sbjct: 574 NLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAP 633

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK------ 535
           D ITY  +I  +C+   +++A+ +L  M    +EP   TY +L++  C   DL+      
Sbjct: 634 DVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNN-CSKIDLRSSSSSL 692

Query: 536 ----------NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
                     +   L   +++ +I    + YT +I  HC   ++  A+  F +M+++G  
Sbjct: 693 DAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLA 752

Query: 586 ISIRDYTK--SFFCM-------------MLSNGFPPDQEICEVM 614
                YT   S +C              ML+ G  PD     V+
Sbjct: 753 PDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 140/572 (24%), Positives = 273/572 (47%), Gaps = 57/572 (9%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + R G + +A+ V   M+E  +  +  +Y + +  L     +D+ + +  D+  ++ P +
Sbjct: 229 FCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMD 288

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG---------- 112
           V+  ++VI G C + +L++A   L+E   + F P V    A++S YC +G          
Sbjct: 289 VFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHD 348

Query: 113 -------------FAEVAKGL------------FCLMLKYGLHPDAFSYNILIHGLCIAG 147
                         + + +GL            F    K G+  D   YN+++  LC  G
Sbjct: 349 EMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLG 408

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            +EEA+E   +M    + PD I Y+ +  G+ L  ++  A  + +++   G  PDIVTY 
Sbjct: 409 KVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYN 468

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           VL  G+ + G  +E L L   M +QG K + + +++++  +C  G++D+A      +E  
Sbjct: 469 VLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEK 528

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
            L+     YS ++ G C+ + V+KA  L   +  +       +   +L  LC +    +A
Sbjct: 529 CLE----NYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKA 584

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
               ++++  N    +++Y+ +I    + G + +A  ++  L+++ ++P ++T+  +I G
Sbjct: 585 LCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMING 644

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN---------------AYCEEGNIQRL 432
           +C+  K+ +A  +L  +K  G+EP  +TYT  +N               A   + N+   
Sbjct: 645 YCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDP 704

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
            AL  EM+   I P  + YTV+I   CK   +Q+A+ L  +M   G+ PD +TY  ++  
Sbjct: 705 SALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSG 764

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           +C   +++KA  L ++M    + P + T ++L
Sbjct: 765 YCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 161/326 (49%), Gaps = 22/326 (6%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +LA  +SR G+  +A+ ++  M+   +K    T+N ++  L      D     +D+++  
Sbjct: 469 VLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLE-- 526

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
              + +   S +++G C+ + +  A   L   + +       S   ++   C  G +E A
Sbjct: 527 --EKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKA 584

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M+   ++P    Y+ +I  L  AG ME+A    N +   G+ PD ITY+I+  G
Sbjct: 585 LCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMING 644

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG-----NVEEGLKLREVMLSQ 232
           +  ++++  AW V+  +  +G +PD++TYTVL+    +I      +  + +K +E M+  
Sbjct: 645 YCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDP 704

Query: 233 G----------FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
                       K +VI Y+VL+   CK+  I +A+ L  EM   GL PD VTY+ L+ G
Sbjct: 705 SALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSG 764

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNS 308
            C    + KA+ L++EM +K I P++
Sbjct: 765 YCNVGNIKKAVVLFDEMLNKGIRPDA 790



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 117/240 (48%), Gaps = 22/240 (9%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++  LC +   + A+  L+        P+++  + ++    + G  E A+ +F +++  G
Sbjct: 571 LLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRG 630

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL-------------- 174
           L PD  +Y I+I+G C    M+EA     DM   G+EPD ITY++L              
Sbjct: 631 LAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSS 690

Query: 175 ----AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
                K    +   S  W  ++ + IK   PD++ YTVLI  +C+  N+++ + L   M+
Sbjct: 691 SLDAMKSKENMMDPSALWSEMKDMDIK---PDVICYTVLIDKHCKTNNIQDAINLFNEMI 747

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +G   + + Y+ LLS  C  G I +A+ L  EM   G++PD  T S+L   + K  KVH
Sbjct: 748 DRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL-HCILKVRKVH 806


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 155/569 (27%), Positives = 271/569 (47%), Gaps = 44/569 (7%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMW--DLYDDIKVSETPR 61
           V+    M  DA+    + K++   V +Q  N LL  L     IM+   L+DD+K+S    
Sbjct: 152 VFVELSMFEDALVTYVEAKKVG--VELQVCNFLLKGLVEGNQIMYVRSLFDDMKISGPSP 209

Query: 62  NVYTNSIVID-------------------------------------GLCQQSRLQDAIL 84
           N+Y+ S+++                                      GLC+  +++ A  
Sbjct: 210 NIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWN 269

Query: 85  FLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
           FLQ    + +  +    NA++  +C  G    A  +F  M K G  PD  SY+IL+ GLC
Sbjct: 270 FLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLC 329

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
             G +        +M R+G+ P+ ++YS L  G     ++  A+++ ++L  +G   D +
Sbjct: 330 KQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHI 389

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            Y++++ G CQ  ++E    L   M+   F  +   YS L+ + C+  ++ EAL +   M
Sbjct: 390 VYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELM 449

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              G+ P++VT +IL+ G   +  + +A    +++    + PN   +  I+ GLC+    
Sbjct: 450 ICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKP 509

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            +    F  +I    + D VLY+I+IDG+VK  ++ EA +LY +++++   P+I T+ SL
Sbjct: 510 NDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSL 569

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G C + K+ +   L   +   GL P  + YT+ +  YC+  N++  L + +EMET+ +
Sbjct: 570 INGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGL 629

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
                 YT +I G  K   +  A   +E+M   G+TP  +TY  +I  + K  D +KA  
Sbjct: 630 SADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMV 689

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           + N M    + P +    IL  GL  +GD
Sbjct: 690 MYNSMLQAGIAPDAKLSCIL--GLGNDGD 716



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/523 (24%), Positives = 241/523 (46%), Gaps = 17/523 (3%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI--SGAWKVIQKL 194
           N L+ GL     +       +DM   G  P+  +YS+L   +   +++    A +++ ++
Sbjct: 180 NFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEM 239

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
            ++G  P+  TY   + G C+   V+      +++  +G+  N   ++ ++   C  G++
Sbjct: 240 EVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQV 299

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            +A+ +   M+  G  PD+ +YSIL+ GLCKQ  V     +  EM    I+PN  ++ ++
Sbjct: 300 HKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSL 359

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           L GLC    +  A   F  L       D ++Y+I++ G  +  ++     L+  ++    
Sbjct: 360 LHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNF 419

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P    ++SLIY +C++ ++ +A  + + +   G+ P+ VT T  ++ +  EG I     
Sbjct: 420 VPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFL 479

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
            L ++    + P   TY V+I GLCK  K  +   +  DM   G  PD + Y+ II  F 
Sbjct: 480 FLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFV 539

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K  DL++AF+L  +M     +P   TY  LI+GLC +  L     L   +    ++  ++
Sbjct: 540 KALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRI 599

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMM 599
            YT++I  +C   ++  A+  F +M  +G       YT               + F   M
Sbjct: 600 LYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEM 659

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           ++ G  P       ++I + + GD      +   M+++G+ PD
Sbjct: 660 MNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPD 702



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/431 (23%), Positives = 201/431 (46%), Gaps = 17/431 (3%)

Query: 232 QGFKLNVIAYSVLLSSMCKSGRI--DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
            G   N+ +YSVL+S      ++  +EA  LL EME  G++P+  TY   + GLC+  +V
Sbjct: 205 SGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQV 264

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             A      +C +    NS+   A++ G C    + +A   FD +     + DV  Y+I+
Sbjct: 265 KSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSIL 324

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           +DG  K G++     +  ++    I+P++V+++SL++G C+ G+V  A  L   +K  G 
Sbjct: 325 VDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGF 384

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           +   + Y+  ++  C+  +++    L  +M      P    Y+ +I   C+  +L+EA++
Sbjct: 385 KHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALE 444

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           + E M   G+ P+ +T   ++  F     + +AF  L+++    + P   TY ++I+GLC
Sbjct: 445 VFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLC 504

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
                 +   +   + +       V Y+ II       D+ +A   + +MV++G + +I 
Sbjct: 505 KVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIF 564

Query: 590 DYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
            YT                + F  M+  G  PD+ +   ++  + +  ++ +  E+   M
Sbjct: 565 TYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREM 624

Query: 635 IKSGLLPDKFL 645
              GL  D F+
Sbjct: 625 ETEGLSADSFV 635



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 5/237 (2%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDD-IKV 56
           +L   +S  G++ +A   + K+++  +  ++ TY  ++  L      + +W ++ D IK 
Sbjct: 463 ILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKR 522

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
              P  V   SI+IDG  +   LQ+A     +   +   P++ +  ++++  C       
Sbjct: 523 GYVPDTVLY-SIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPE 581

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
              LF  M+  GL PD   Y  LI   C   +M+ ALE   +M   G+  D+  Y+ L  
Sbjct: 582 VMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIG 641

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           GF  +  + GA   +++++ KG  P +VTYT LI GY +IG+ ++ + +   ML  G
Sbjct: 642 GFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAG 698


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 250/531 (47%), Gaps = 7/531 (1%)

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETA---GKEFGPSVVSLNAIMSRYCKLGFAE 115
           TP  V + SI++ G C ++R ++A+  L+  A   G+   P+VV+   ++   CK    +
Sbjct: 166 TPDTV-SYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFD 224

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            A+G+F  M+  G+ P+  +YN LIHG    G  +E ++    M   G++PD  TY  L 
Sbjct: 225 RAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSL- 283

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
              + L  +S     +  ++  G  PD   + +    Y + G +++ + +   M   G  
Sbjct: 284 --LNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLS 341

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            NV+ Y  L+ ++CK GR+D+A     +M   G+ P++V ++ L+ GLC  DK  +A +L
Sbjct: 342 PNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEEL 401

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
             EM  + I PN+     ++  LC    + E R   D +       D   Y  +I GY  
Sbjct: 402 VYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCL 461

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G   EA +++  ++   +SP+ VT+N+L++G+C   ++ DA  L   +   G+ P  VT
Sbjct: 462 AGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVT 521

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y T ++   +         L   M          TY +++ GLCK   + EA ++ + + 
Sbjct: 522 YNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLC 581

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G+  + IT+  +I +  K      A  L   +  + L P   TY ++ + L   G L+
Sbjct: 582 SKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLE 641

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
             D L  +++++  +        +++     GD+ +A  +  ++ E+ F +
Sbjct: 642 EFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSV 692



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 149/572 (26%), Positives = 258/572 (45%), Gaps = 22/572 (3%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
            P+  + + ++   C++G  + +   F L+LK G   +    N L+ GLC    + EA++
Sbjct: 95  APNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMD 154

Query: 155 -FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI---KGSDPDIVTYTVLI 210
                M   G  PD ++YSIL KGF   ++   A ++++ +     +   P++VTYT +I
Sbjct: 155 VLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVI 214

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C+    +    + + M+  G K N   Y+ L+      G+  E + +L +M A GLK
Sbjct: 215 DGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLK 274

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD  TY  L+  LC   ++H  + L   M    +SP+            +  MI +A   
Sbjct: 275 PDCYTYGSLLNYLCALSEMHSFLDL---MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDI 331

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           F+ +       +VV Y  +ID   KLG + +A   + Q+I + ++P+IV FNSL+YG C 
Sbjct: 332 FNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCT 391

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
             K   A  L+  +   G+ P+AV + T +   C  G +     L+  ME   + P   +
Sbjct: 392 VDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFS 451

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           YT +I G C   +  EA ++ + M  IG++P ++TYNT++  +C    +  A+ L  +M 
Sbjct: 452 YTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREML 511

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              + P   TYN ++ GL        A  L +++           Y  I+   C    V 
Sbjct: 512 RKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVD 571

Query: 571 KAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVML 615
           +A   F  +  KG +++I  +T                  F  + +NG  P+     ++ 
Sbjct: 572 EAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVA 631

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               + G L     L + M K+G  P+  ++N
Sbjct: 632 ENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLN 663



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 151/565 (26%), Positives = 254/565 (44%), Gaps = 50/565 (8%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC---KLGFAEVAK 118
           N  T SI+I  LC+  RL+ +           +  + + +N ++   C   ++G  E   
Sbjct: 97  NTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVG--EAMD 154

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF----TNDMGRHGVEPDAITYSIL 174
            L   M + G  PD  SY+IL+ G C     EEALE      ND GR    P+ +TY+ +
Sbjct: 155 VLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGR-SCPPNVVTYTTV 213

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G         A  V Q+++  G  P+  TY  LI GY  IG  +E +++ E M ++G 
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGL 273

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           K +   Y  LL+ +C    +   L L+ E    GL PD   ++I      K   + KA+ 
Sbjct: 274 KPDCYTYGSLLNYLCALSEMHSFLDLMVEN---GLSPDHHIFNIFFSAYAKCGMIDKAMD 330

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           ++N+M    +SPN   +GA++  LC+   + +A + F+ +I      ++V++N ++ G  
Sbjct: 331 IFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLC 390

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH------- 407
            +     A +L  +++++ I P+ V FN+LI   C  G+V + RRL+D ++ H       
Sbjct: 391 TVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLME-HVGVRPDA 449

Query: 408 -----------------------------GLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
                                        GL P+ VTY T ++ YC    I     L +E
Sbjct: 450 FSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFRE 509

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M  K + P  VTY  ++ GL +  +  EA +L  +M   G   D  TYN I+   CK   
Sbjct: 510 MLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNC 569

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           + +AF++   +    L+    T+ I+I  L   G  ++A  L  ++  + +    V Y  
Sbjct: 570 VDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRL 629

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKG 583
           + +    EG + +  + F  M + G
Sbjct: 630 VAENLIEEGSLEEFDSLFSAMEKNG 654



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 233/500 (46%), Gaps = 12/500 (2%)

Query: 18  VIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           V  +M +  +K +  TYN L++   ++     +  + + +       + YT   +++ LC
Sbjct: 229 VFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC 288

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
             S +     FL         P     N   S Y K G  + A  +F  M ++GL P+  
Sbjct: 289 ALSEMHS---FLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVV 345

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +Y  LI  LC  G +++A    N M   GV P+ + ++ L  G   + +   A +++ ++
Sbjct: 346 NYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEM 405

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           L +G  P+ V +  LIC  C +G V EG +L ++M   G + +  +Y+ L+S  C +GR 
Sbjct: 406 LDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRT 465

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           DEA  +   M ++GL P  VTY+ L+ G C   ++  A  L+ EM  K ++P    +  I
Sbjct: 466 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTI 525

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           L GL + +  +EA+  + ++I S    D+  YNI+++G  K   + EA ++++ L  K +
Sbjct: 526 LHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 585

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
             +I+TF  +I    K G+  DA  L   I  +GL P+ VTY        EEG+++   +
Sbjct: 586 QLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDS 645

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L   ME     P       +++ L  +  +  A   L  +     + +  T + +I  F 
Sbjct: 646 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFT 705

Query: 495 K------CKDLRKAFQLLNQ 508
                   K L + +  LN+
Sbjct: 706 SDEYQHHAKSLPEKYHFLNE 725



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 227/498 (45%), Gaps = 32/498 (6%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEV-- 116
           P NV T + VIDGLC+      A    Q+       P+  + N ++  Y  +G + EV  
Sbjct: 204 PPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQ 263

Query: 117 ------AKGL-------------FC----------LMLKYGLHPDAFSYNILIHGLCIAG 147
                 A+GL              C          LM++ GL PD   +NI        G
Sbjct: 264 MLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCG 323

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            +++A++  N M +HG+ P+ + Y  L      L ++  A     +++ +G  P+IV + 
Sbjct: 324 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 383

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            L+ G C +   E   +L   ML QG   N + ++ L+ ++C  GR+ E   L+  ME V
Sbjct: 384 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 443

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G++PD  +Y+ LI G C   +  +A ++++ M S  +SP    +  +L G C    I +A
Sbjct: 444 GVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 503

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F  ++       VV YN ++ G  +     EA +LY  +I       I T+N ++ G
Sbjct: 504 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 563

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK+  V +A ++  ++   GL+ + +T+T  + A  + G  +  + L   +    + P 
Sbjct: 564 LCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPN 623

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            VTY +V + L ++  L+E   L   M   G  P+    N ++R      D+ +A   L+
Sbjct: 624 VVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLS 683

Query: 508 QMWLHNLEPTSATYNILI 525
           ++   N    ++T ++LI
Sbjct: 684 KLDERNFSVEASTTSLLI 701



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 187/388 (48%), Gaps = 5/388 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETP 60
            Y++ GM+  A+ +  KM++  L  ++  Y +L+  L    R  D        I    TP
Sbjct: 318 AYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTP 377

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
             V  NS+V  GLC   + + A   + E   +   P+ V  N ++   C +G     + L
Sbjct: 378 NIVVFNSLVY-GLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL 436

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             LM   G+ PDAFSY  LI G C+AG  +EA +  + M   G+ P  +TY+ L  G+  
Sbjct: 437 IDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCS 496

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
            S+I  A+ + +++L KG  P +VTY  ++ G  Q     E  +L   M++ G K ++  
Sbjct: 497 ASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYT 556

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+++L+ +CKS  +DEA  +   + + GL+ +++T++I+I  L K  +   A+ L+  + 
Sbjct: 557 YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIP 616

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +  + PN   +  +   L E+  + E    F ++  +    +  + N ++   +  G+I 
Sbjct: 617 ANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDIS 676

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGF 388
            A     +L E+  S    T + LI  F
Sbjct: 677 RAGAYLSKLDERNFSVEASTTSLLISIF 704



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/383 (22%), Positives = 174/383 (45%), Gaps = 21/383 (5%)

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE-----------ALGLLYEME-- 265
           +++ LKL + +L      +V+A++ +L+++ ++ R               + L   M   
Sbjct: 30  LDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVRE 89

Query: 266 -AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
            ++ + P+  TYSILI  LC+  ++  +   +  +       N      +L GLC+ + +
Sbjct: 90  CSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRV 149

Query: 325 TEA-RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE---KRISPSIVT 380
            EA  +    +    C  D V Y+I++ G+       EA++L R +     +   P++VT
Sbjct: 150 GEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVT 209

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           + ++I G CK      A  +   +  +G++P+  TY   ++ Y   G  + ++ +L++M 
Sbjct: 210 YTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMS 269

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            + + P   TY  ++  LC    L E    L+ M   G++PD   +N    ++ KC  + 
Sbjct: 270 ARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMID 326

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           KA  + N+M  H L P    Y  LID LC  G + +A+     +    ++   V + +++
Sbjct: 327 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 386

Query: 561 KAHCAEGDVHKAMTFFCQMVEKG 583
              C      +A     +M+++G
Sbjct: 387 YGLCTVDKWERAEELVYEMLDQG 409


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 232/459 (50%), Gaps = 5/459 (1%)

Query: 17  FVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKV-----SETPRNVYTNSIVID 71
            V+ +M EL  K  + +Y  LL  L          D + +        P +V   + VI+
Sbjct: 157 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVIN 216

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           GL ++ +L  A         +   P VV+ ++I+S   K    + A  +F  M+K G+ P
Sbjct: 217 GLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMP 276

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D   Y  L+HG C +G  +EA+     M RHGVEPD +TY+ L        + + A K+ 
Sbjct: 277 DCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIF 336

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             L+ +G  PD  TY  L+ GY   G + E   L ++M+ +G +L    +++++ +  K 
Sbjct: 337 DSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKH 396

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            ++DEAL +   M   GL PD+V Y  ++  LC   +V  A+  +N + S+ ++PN    
Sbjct: 397 NKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVF 456

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++ GLC  +   +       +I      D + +N ++    K G + EA  L+  ++ 
Sbjct: 457 TTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVR 516

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
             I P+  T+N+LI G+C +GK+ +A +LL  +  +G++PS VTY T +N Y + G I+ 
Sbjct: 517 IGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIED 576

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
            L LL+EM+ K + P  VTY ++++GL +  +   A +L
Sbjct: 577 GLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 615



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 236/460 (51%), Gaps = 2/460 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH-GVEP-DAITYSILAKGFHLL 181
           M + G  PD FSY IL+ GLC   + ++AL+  + M  H G  P D + Y+ +  G    
Sbjct: 162 MPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLRE 221

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            Q+  A+ +   +L +G  PD+VTY+ +I    +   +++  ++   M+  G   + I Y
Sbjct: 222 GQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMY 281

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C SG+  EA+G+  +M   G++PD+VTY+ L+  LCK  K  +A ++++ +  
Sbjct: 282 TSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVK 341

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +   P+S  +G +L G   +  + E     D ++         ++N+++  Y K   + E
Sbjct: 342 RGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDE 401

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ ++  + ++ ++P IV + +++   C  G+V DA    +++K  GL P+ V +TT ++
Sbjct: 402 ALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIH 461

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C      ++  L  EM  + I    + +  ++  LCK+ ++ EA  L + M  IG+ P
Sbjct: 462 GLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEP 521

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +  TYNT+I  +C    + +A +LL  M  + ++P+  TYN +I+G   NG +++   LL
Sbjct: 522 NTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLL 581

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
             +    ++   V Y  +++     G    A   + +M++
Sbjct: 582 REMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 621



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 188/397 (47%), Gaps = 5/397 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           R G +  A  +   M +      + TY+S++  L  T  M D    +        V  + 
Sbjct: 220 REGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAM-DKATQVFTRMVKNGVMPDC 278

Query: 68  I----VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           I    ++ G C   + ++AI   ++       P VV+  A+M   CK G +  A+ +F  
Sbjct: 279 IMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDS 338

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           ++K G  PD+ +Y  L+HG    G++ E  +  + M + G++     ++++   +   ++
Sbjct: 339 LVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNK 398

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A  V   +  +G +PDIV Y  ++   C  G V++ L     + S+G   N++ ++ 
Sbjct: 399 VDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTT 458

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +C   + D+   L +EM   G+  D + ++ ++  LCK+ +V +A  L++ M    
Sbjct: 459 LIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIG 518

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I PN+  +  ++ G C    + EA      ++ +      V YN +I+GY + G I + +
Sbjct: 519 IEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGL 578

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            L R++  K ++P IVT+  L+ G  + G+   A+ L
Sbjct: 579 TLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 615



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/502 (20%), Positives = 202/502 (40%), Gaps = 91/502 (18%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK-----LNVIAYSVLLSSMCKSGRID 255
           P+I TY ++I    ++G ++        +++ G +     L   +   L ++  ++ R+D
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMD 156

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
               +L  M  +G KPDL +Y+IL++GLC      +A+ L + M   +            
Sbjct: 157 I---VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHK------------ 201

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
                                  C  DVV Y  +I+G ++ G + +A  L+  ++++  S
Sbjct: 202 ---------------------GRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPS 240

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P +VT++S+I    K   +  A ++   +  +G+ P  + YT+ ++ YC  G  +  + +
Sbjct: 241 PDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGI 300

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY--------- 486
            ++M    + P  VTYT ++  LCK  K  EA ++ + +   G  PD  TY         
Sbjct: 301 FKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYAT 360

Query: 487 --------------------------NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
                                     N I+ ++ K   + +A  + + M    L P    
Sbjct: 361 EGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVN 420

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y  ++D LC  G + +A     SL+   ++   V +TT+I   C      K      +M+
Sbjct: 421 YGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMI 480

Query: 581 EKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
           ++G  +    +                K+ F +M+  G  P+      ++  +   G + 
Sbjct: 481 DRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMD 540

Query: 626 SVFELAAVMIKSGLLPDKFLIN 647
              +L  VM+ +G+ P     N
Sbjct: 541 EAMKLLGVMVFNGVKPSDVTYN 562



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 117/233 (50%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           ++++    + +++ +A+L       +   P +V+   ++   C  G  + A   F  +  
Sbjct: 387 NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKS 446

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL P+   +  LIHGLC     ++  E   +M   G+  D I ++ +        ++  
Sbjct: 447 EGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIE 506

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  +   ++  G +P+  TY  LI GYC  G ++E +KL  VM+  G K + + Y+ +++
Sbjct: 507 AKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIIN 566

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
              ++GRI++ L LL EM+  G+ P +VTY +L++GL +  +   A +LY  M
Sbjct: 567 GYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619


>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 726

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 253/553 (45%), Gaps = 49/553 (8%)

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           +M  Y + G    A  +  LM K G  PD    N+ ++ L +AG +++ALEF   M R G
Sbjct: 168 LMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVG 227

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           VEP                                   D+ TY  LI G C    V + +
Sbjct: 228 VEP-----------------------------------DVYTYNCLIKGLCGARRVVDAM 252

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA-VGLKPDLVTYSILIRG 282
           ++  VML  G   + I+Y  ++S +CK  R++E  GLL  M    GL PD VTY++LI G
Sbjct: 253 EMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHG 312

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           L K     +A++   E   KR   +   + AI+   C    + EA+     +I   C  D
Sbjct: 313 LAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPD 372

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           VV Y+ ++DG+ ++G + +A ++ + + +    P+ VT  +L+ G CK GK ++A  LL+
Sbjct: 373 VVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLN 432

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
             +     PS +TY+  M+ +  EG ++    ++ +M  K   PT V   ++I  LCK  
Sbjct: 433 KSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDR 492

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           K  EA   +E     G T + + + T+I  F +  DL  A  L++ M+L N  P   TY 
Sbjct: 493 KPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYT 552

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV------------- 569
           +++D L   G LK A  L+  +    +  T V Y T+I  +C +G++             
Sbjct: 553 VVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLAR 612

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
            +  + + Q+VEK       +   S    +L      D + C +++ +F   G     + 
Sbjct: 613 QEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYN 672

Query: 630 LAAVMIKSGLLPD 642
           +A  M +  L+PD
Sbjct: 673 VACRMFRRNLIPD 685



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 256/527 (48%), Gaps = 22/527 (4%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKE----LDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVS 57
           L   YSR G +  A+ V+  M++     D+ +     N L+   R  D   +  + ++  
Sbjct: 168 LMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGR-VDKALEFAERMRRV 226

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +VYT + +I GLC   R+ DA+  +         P  +S   +MS  CK    E  
Sbjct: 227 GVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEV 286

Query: 118 KGLFCLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           +GL   M    GL PD  +YN+LIHGL   G  +EALEF  +        D + YS +  
Sbjct: 287 RGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVH 346

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F L  +++ A +++ +++ KG  PD+VTY+ ++ G+C+IG +++  K+ + M     K 
Sbjct: 347 SFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKP 406

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N + ++ LL+ +CK G+  EA  LL + E     P  +TYS+++ G  ++ K+ ++  + 
Sbjct: 407 NTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVV 466

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M  K   P +     ++  LC+     EA+ + +      C  +VV +  +I G+ + 
Sbjct: 467 VQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQ 526

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G++  A+ L   +      P +VT+  ++    K G++ +A  L++ +   G+ P+ VTY
Sbjct: 527 GDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTY 586

Query: 417 TTFMNAYCEEG-------NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            T ++ YCE+G        ++++LA  QEM++         Y  V++ LC   KL EA  
Sbjct: 587 RTVIHRYCEKGNLEDLLNLLEKMLA-RQEMKS--------AYNQVVEKLCAFGKLNEAYS 637

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           LL  +       D  T + ++ SF       +A+ +  +M+  NL P
Sbjct: 638 LLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIP 684


>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
          Length = 726

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 253/553 (45%), Gaps = 49/553 (8%)

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           +M  Y + G    A  +  LM K G  PD    N+ ++ L +AG +++ALEF   M R G
Sbjct: 168 LMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVG 227

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           VEP                                   D+ TY  LI G C    V + +
Sbjct: 228 VEP-----------------------------------DVYTYNCLIKGLCGARRVVDAM 252

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA-VGLKPDLVTYSILIRG 282
           ++  VML  G   + I+Y  ++S +CK  R++E  GLL  M    GL PD VTY++LI G
Sbjct: 253 EMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHG 312

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           L K     +A++   E   KR   +   + AI+   C    + EA+     +I   C  D
Sbjct: 313 LAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPD 372

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           VV Y+ ++DG+ ++G + +A ++ + + +    P+ VT  +L+ G CK GK ++A  LL+
Sbjct: 373 VVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLN 432

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
             +     PS +TY+  M+ +  EG ++    ++ +M  K   PT V   ++I  LCK  
Sbjct: 433 KSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDR 492

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           K  EA   +E     G T + + + T+I  F +  DL  A  L++ M+L N  P   TY 
Sbjct: 493 KPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYT 552

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV------------- 569
           +++D L   G LK A  L+  +    +  T V Y T+I  +C +G++             
Sbjct: 553 VVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLAR 612

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
            +  + + Q+VEK       +   S    +L      D + C +++ +F   G     + 
Sbjct: 613 QEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYN 672

Query: 630 LAAVMIKSGLLPD 642
           +A  M +  L+PD
Sbjct: 673 VACRMFRRNLIPD 685



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 256/527 (48%), Gaps = 22/527 (4%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKE----LDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVS 57
           L   YSR G +  A+ V+  M++     D+ +     N L+   R  D   +  + ++  
Sbjct: 168 LMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGR-VDKALEFAERMRRV 226

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +VYT + +I GLC   R+ DA+  +         P  +S   +MS  CK    E  
Sbjct: 227 GVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEV 286

Query: 118 KGLFCLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           +GL   M    GL PD  +YN+LIHGL   G  +EALEF  +        D + YS +  
Sbjct: 287 RGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVH 346

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F L  +++ A +++ +++ KG  PD+VTY+ ++ G+C+IG +++  K+ + M     K 
Sbjct: 347 SFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKP 406

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N + ++ LL+ +CK G+  EA  LL + E     P  +TYS+++ G  ++ K+ ++  + 
Sbjct: 407 NTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVV 466

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M  K   P +     ++  LC+     EA+ + +      C  +VV +  +I G+ + 
Sbjct: 467 VQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQ 526

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G++  A+ L   +      P +VT+  ++    K G++ +A  L++ +   G+ P+ VTY
Sbjct: 527 GDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTY 586

Query: 417 TTFMNAYCEEG-------NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            T ++ YCE+G        ++++LA  QEM++         Y  V++ LC   KL EA  
Sbjct: 587 RTVIHRYCEKGNLEDLLNLLEKMLA-RQEMKS--------AYNQVVEKLCAFGKLNEAYS 637

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           LL  +       D  T + ++ SF       +A+ +  +M+  NL P
Sbjct: 638 LLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIP 684


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 132/527 (25%), Positives = 258/527 (48%), Gaps = 16/527 (3%)

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P+AF++ ++ +    AG +  A++    M + GVEP+ +  +       + +++  A +
Sbjct: 170 RPEAFAHVMVSYSR--AGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALR 227

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
            ++++ + G  P++VTY  LI GYC +  VE  ++L   M  +G   + ++Y  ++  +C
Sbjct: 228 FLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLC 287

Query: 250 KSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           +  RI E   L+ +M +   L PD VTY+ L+  L K     +A++   E   +    + 
Sbjct: 288 QDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDK 347

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             + AI+   C +  +  A+   + +I   C  DVV Y  +++G  K+G + EA ++ +Q
Sbjct: 348 VGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQ 407

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + +    P+ V++ +L+ G C++G   +AR +++T +     P+A+TY+  M+    EG 
Sbjct: 408 MYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGK 467

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +     +++EM TK   PT V   ++IK LC + K+ EA + +E+    G   + + + T
Sbjct: 468 LSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTT 527

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I  FC+  ++  A  LL+ M+L+N  P + T+  +ID L   G ++ A    + + +  
Sbjct: 528 VIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKG 587

Query: 549 ISLTKVAYTTIIKAHCAEGDVH-------------KAMTFFCQMVEKGFEISIRDYTKSF 595
           +  T V Y  +I  +C  G V              K  T + Q++EK       +     
Sbjct: 588 LDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCRTAYNQVIEKLCNFGNPEAADKV 647

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             ++L      D   C +++ ++   G   S +++A  M    L+PD
Sbjct: 648 VGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPD 694



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 271/551 (49%), Gaps = 9/551 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIK----VSETPR 61
           YSR G + +A+ V+  M++  ++ ++   N+ ++ L   + +      ++    V  TP 
Sbjct: 181 YSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITP- 239

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + +I G C   +++ A+  + E   K   P  VS   +M   C+    +  + L 
Sbjct: 240 NVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLM 299

Query: 122 CLMLKYG-LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             M+K   L PD  +YN L+H L   G  +EALEF  +    G + D + YS +   F +
Sbjct: 300 EKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCM 359

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             ++  A +++ +++ KG  PD+VTYT ++ G C++G VEE  K+ + M   G K N ++
Sbjct: 360 QGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVS 419

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ LL+ +C+ G   EA  ++   E     P+ +TYS+++ GL ++ K+ +A  +  EM 
Sbjct: 420 YTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREML 479

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +K   P       ++  LC ++ + EA+ + +  +   C  + V +  +I G+ +  NI 
Sbjct: 480 TKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNID 539

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A+ L   +      P  VTF ++I    K G++ +A      +   GL+P+ VTY   +
Sbjct: 540 TALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVI 599

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + YC+ G ++ L+ LL +M +++       Y  VI+ LC     + A +++  +      
Sbjct: 600 HQYCKMGRVEELIKLLGKMLSRS--KCRTAYNQVIEKLCNFGNPEAADKVVGLVLRTASR 657

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            D  T + ++ S+        A+++  +M+  NL P       L   L + G L+ AD L
Sbjct: 658 IDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPDLKLCEKLSKKLVLEGKLEEADNL 717

Query: 541 LVS-LQEHNIS 550
           ++  +Q  NIS
Sbjct: 718 MLQFVQRGNIS 728


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 234/460 (50%), Gaps = 3/460 (0%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           L +   L++   FL+    K   P VV+  A++  +CK+G  + A  +  ++ + G   D
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
           A SYN+LI+  C +G +EEAL     +    V P+A TY  +        ++  A +V+ 
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRV---LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           + L     PD+VT TVLI   C+   V + +KL   M  +G K +V+ Y+VL+   CK G
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           R+DEA+  L ++ + G + D++++++++R LC   +   A++L   M  K   P+     
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++  LC+K ++ +A    + +       +   +N +I G+     I  A++    ++ +
Sbjct: 316 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSR 375

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              P IVT+N L+   CK+GKV DA  +L  +   G  PS ++Y T ++   + G  +  
Sbjct: 376 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 435

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           + LL+EM  K + P  +T T V+ GL ++ K+ EA++    +   G+ P+   YN+I+  
Sbjct: 436 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMG 495

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            CK +    A   L  M  +  +PT A+Y  LI G+   G
Sbjct: 496 LCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEG 535



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 215/456 (47%), Gaps = 6/456 (1%)

Query: 140 IHGLCI---AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           IH LC     G +EE   F   M   G  PD +  + L + F  + +   A +++  L  
Sbjct: 73  IHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEE 132

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
            G+  D  +Y VLI  YC+ G +EE L+   V+       N   Y  +L S+C  G++ +
Sbjct: 133 SGAVIDANSYNVLINAYCKSGEIEEALR---VLDHTSVAPNAATYDAVLCSLCDRGKLKQ 189

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+ +L         PD+VT ++LI   CK+  V +A++L+NEM  K   P+   +  ++ 
Sbjct: 190 AMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIK 249

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           G C++  + EA ++   L    C  DV+ +N+++      G   +A++L   ++ K   P
Sbjct: 250 GFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFP 309

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           S+VTFN LI   C+ G +  A  +L+ +  HG  P++ ++   +  +C    I R +  L
Sbjct: 310 SVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHL 369

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           + M ++   P  VTY +++  LCK  K+ +AV +L  +   G +P  I+YNT+I    K 
Sbjct: 370 EIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKV 429

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
                A +LL +M    L+P   T   ++ GL   G +  A      L+   I      Y
Sbjct: 430 GKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIY 489

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            +I+   C       A+ F   MV  G + +   YT
Sbjct: 490 NSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYT 525



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 178/323 (55%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L+++++      +V T +++I G C++ RL +AI+FL++         V+S N I+   C
Sbjct: 228 LFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLC 287

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
             G    A  L   ML+ G  P   ++NILI+ LC  G + +AL     M +HG  P++ 
Sbjct: 288 SGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSR 347

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +++ L +GF     I  A + ++ ++ +G  PDIVTY +L+   C+ G V++ + +   +
Sbjct: 348 SFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQL 407

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
            S+G   ++I+Y+ ++  + K G+ + A+ LL EM   GLKPDL+T + ++ GL ++ KV
Sbjct: 408 SSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKV 467

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
           H+AI+ ++ +    I PN+F + +I++GLC+ +  + A  +   ++ + C      Y  +
Sbjct: 468 HEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTL 527

Query: 350 IDGYVKLGNIGEAVQLYRQLIEK 372
           I G    G   EA +L  +L  +
Sbjct: 528 IKGITYEGLAEEASKLSNELYSR 550



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 134/304 (44%), Gaps = 18/304 (5%)

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           ++ G + E  +    +  K   P +V   +LI  FCK G+  +A R++  ++  G    A
Sbjct: 80  IRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDA 139

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            +Y   +NAYC+ G I+  L +L      ++ P   TY  V+  LC + KL++A+Q+L+ 
Sbjct: 140 NSYNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQAMQVLDR 196

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
                  PD +T   +I + CK   + +A +L N+M     +P   TYN+LI G C  G 
Sbjct: 197 QLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGR 256

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           L  A   L  L  +      +++  I+++ C+ G    AM     M+ KG   S+  +  
Sbjct: 257 LDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNI 316

Query: 594 --SFFC-------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
             +F C             MM  +G  P+      ++  F     +    E   +M+  G
Sbjct: 317 LINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRG 376

Query: 639 LLPD 642
             PD
Sbjct: 377 CYPD 380



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 3/160 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
           + G V DAV +++++       S+ +YN++   L  +   ++  +L +++       ++ 
Sbjct: 393 KDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLI 452

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + V+ GL ++ ++ +AI F     G    P+    N+IM   CK     +A      M
Sbjct: 453 TCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDM 512

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +  G  P   SY  LI G+   G  EEA + +N++   G+
Sbjct: 513 VANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGL 552



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 23/185 (12%)

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           L +  +L+E  + LE M   G  PD +    +IR FCK    + A +++  +        
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
           + +YN+LI+  C +G+++ A   L  L   +++     Y  ++ + C  G + +AM    
Sbjct: 139 ANSYNVLINAYCKSGEIEEA---LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAM---- 191

Query: 578 QMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
           Q++++  +      +K +          PD   C V++ A  +   +G   +L   M   
Sbjct: 192 QVLDRQLQ------SKCY----------PDVVTCTVLIDATCKESGVGQAMKLFNEMRGK 235

Query: 638 GLLPD 642
           G  PD
Sbjct: 236 GCKPD 240


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 145/567 (25%), Positives = 276/567 (48%), Gaps = 49/567 (8%)

Query: 5   VYSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTDIMWDLYDDI-----KVSE 58
            Y++  M   A+ +  +M E+   +  I++YNSLL  L  ++  WD  +        +  
Sbjct: 87  AYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESN-KWDEAESFFLYFETMGL 145

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           +P N+ T +I+I   C++ +   A   L     + F P V S   +++   K G+   A 
Sbjct: 146 SP-NLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDAL 204

Query: 119 GLFCLMLKYGLHPDAF------------------------------------SYNILIHG 142
            LF  M + G+ PD                                      SYN++I+G
Sbjct: 205 KLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMING 264

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           LC  G  +E+ E  + M ++    D  TYS L  G      + GA +V +++   G  PD
Sbjct: 265 LCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPD 324

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           +V Y  ++ GY + G +EE L+L +VM  +G +  V++Y++L+  + ++ ++DEA+ +  
Sbjct: 325 VVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWE 383

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
            +       D +TY +L+ GLCK   ++KA+ +  E  + R   ++FA+ +++ GLC + 
Sbjct: 384 LLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREG 443

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            + E     D +    C  +  + N +I+G+V+   + +A++ +  ++ K   P++VT+N
Sbjct: 444 RLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYN 503

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           +LI G  K  + ++A  L+  +   G +P+ +TY+  MN  C+   +   L L  +   K
Sbjct: 504 TLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK 563

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
              P    + ++I GLC   K+++A+QL  +M      P+ +T+NT++  F K +D  +A
Sbjct: 564 GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERA 623

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLC 529
               +++W H L+  S++    ++  C
Sbjct: 624 ----SKIWDHILQSWSSSNCYYMEHTC 646



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 237/510 (46%), Gaps = 4/510 (0%)

Query: 76  QSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           ++ + D  L + +   + FG  P + S N++++   +    + A+  F      GL P+ 
Sbjct: 90  KNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNL 149

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
            +YNILI   C     ++A E  N M   G  PD  +Y  L         +S A K+  +
Sbjct: 150 QTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDE 209

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS-QGFKLNVIAYSVLLSSMCKSG 252
           +  +G  PD+  Y +LI G+ + G++    ++ E +L       N+ +Y+V+++ +CK G
Sbjct: 210 MPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCG 269

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           + DE+  + + M+      DL TYS LI GLC    +  A ++Y EM    +SP+   + 
Sbjct: 270 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 329

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            +L G      I E    +  +    C + VV YNI+I G  +   + EA+ ++  L EK
Sbjct: 330 TMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEK 388

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
                 +T+  L++G CKNG +  A  +L+  +    +     Y++ +N  C EG +  +
Sbjct: 389 DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEV 448

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             +L +M      P       VI G  +  KL++A++   +M   G  P  +TYNT+I  
Sbjct: 449 AGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING 508

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
             K +   +A+ L+ +M     +P   TY++L++GLC    L  A  L     E      
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPD 568

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
              +  II   C+ G V  A+  + +M ++
Sbjct: 569 VKMHNIIIHGLCSSGKVEDALQLYSEMKQR 598



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 24/302 (7%)

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADA 397
           C +DV L   +I  Y K     +A+ +++++ E     P I ++NSL+    ++ K  +A
Sbjct: 76  CPEDVAL--TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEA 133

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
                  +  GL P+  TY   +   C +    +   LL  M  +   P   +Y  +I  
Sbjct: 134 ESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINS 193

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL-HNLEP 516
           L K   + +A++L ++M   GVTPD   YN +I  F K  D+  A ++  ++    ++ P
Sbjct: 194 LAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYP 253

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              +YN++I+GLC  G    +  +   ++++        Y+T+I   C  G++  A   +
Sbjct: 254 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVY 313

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
            +M E                    NG  PD  +   ML  + + G +    EL  VM K
Sbjct: 314 KEMAE--------------------NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353

Query: 637 SG 638
            G
Sbjct: 354 EG 355



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 84/211 (39%), Gaps = 24/211 (11%)

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY-VIGVTPDQIT 485
            ++ R++ L++  + K   P  V  TV IK   K     +A+ + + M+ + G  P   +
Sbjct: 60  AHVSRIVELIRTQKCKC--PEDVALTV-IKAYAKNSMPDQALDIFQRMHEIFGCQPGIRS 116

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YN+++ +  +     +A           L P   TYNILI   C       A  LL  + 
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 176

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFP 605
           E   S    +Y T+I +    G +  A+  F +M E+G                      
Sbjct: 177 EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVT-------------------- 216

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           PD     +++  F + GD+ +  E+   ++K
Sbjct: 217 PDVACYNILIDGFFKKGDILNASEIWERLLK 247


>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
          Length = 683

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 223/450 (49%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS    NA+++   + G  + A   F  M   G  PD F+YN L+HG+C  G ++EAL  
Sbjct: 178 PSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRL 237

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M R G+ P+ +TY++L  GF   S++  A  V++++  KG      TY  L+ G  +
Sbjct: 238 VKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFR 297

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
               E   ++    +     L+ IAY  LL  + K+    EA+ L  +M   G      T
Sbjct: 298 CLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTT 357

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           +SI+I    K  +     +L ++   K  +     +  I+      + I++A  YF  ++
Sbjct: 358 FSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMV 417

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
               +  V  YNI+ID + K G +  A++  + + E   SP++VTFN+LI G+ K G V 
Sbjct: 418 SDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVH 477

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           DA+  L  +  HGL P  +T+T+ ++  C    +        EM    + P   TY V+I
Sbjct: 478 DAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLI 537

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLC    + +A++LL  M + G+TPD  ++N  I SFC+ + + KA +L N M  + + 
Sbjct: 538 HGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVS 597

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           P S TYN LI  LC    +  A  ++++++
Sbjct: 598 PDSYTYNALIKALCDERRVDEAKEIILAME 627



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/507 (24%), Positives = 222/507 (43%), Gaps = 70/507 (13%)

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
           L A++  + +LG A  A  +F  + + GL P    YN +I     AG+            
Sbjct: 148 LCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGA------------ 195

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
                                  +  A+   Q++   G  PD  TY  L+ G C+ G V+
Sbjct: 196 -----------------------VDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVD 232

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
           E L+L + M   G + NV+ Y++L+   C + R++EA+ +L  M+  G+     TY  L+
Sbjct: 233 EALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLV 292

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA---------RMYF 331
            G  +  +  +A ++ +E      + +S A+  +L  L + +M  EA         R Y 
Sbjct: 293 HGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYL 352

Query: 332 -----------------DSLIMSNCIQDVV---------LYNIMIDGYVKLGNIGEAVQL 365
                            +S  +   + D +         +Y ++I  +++  +I +A + 
Sbjct: 353 LGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKY 412

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           + Q++   +  S+ ++N +I  F K G+V  A   +  ++  G  P+ VT+ T +N Y +
Sbjct: 413 FSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLK 472

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            GN+    A L+ +    + P  +T+T +I GLC   +L +A     +M   GV P+  T
Sbjct: 473 LGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQT 532

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YN +I   C    + KA +LLN+M +  + P + ++N  I   C    ++ A  L   + 
Sbjct: 533 YNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMS 592

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKA 572
            + +S     Y  +IKA C E  V +A
Sbjct: 593 RYGVSPDSYTYNALIKALCDERRVDEA 619



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/499 (21%), Positives = 220/499 (44%), Gaps = 39/499 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY-NLRH--TDIMWDLYDDIKVSETPRN 62
           + R G+ H A  V  ++  L L+ S   YN+++  ++R    D  +  +  +       +
Sbjct: 155 WGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPD 214

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T + ++ G+C++  + +A+  +++       P+VV+   ++  +C     E A  +  
Sbjct: 215 CFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLE 274

Query: 123 LMLKYGLHPDAFSYNILIHG---------------------------------LCIAGS- 148
            M + G+     +Y  L+HG                                  C++ + 
Sbjct: 275 RMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKND 334

Query: 149 -MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
             +EA+E    M + G    + T+SI+      + + S   +++   + KG +     Y 
Sbjct: 335 MDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYI 394

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           ++I  + +  ++ +  K    M+S G   +V +Y++++    K+G ++ AL  +  M+  
Sbjct: 395 MIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQES 454

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  P+LVT++ LI G  K   VH A      +    + P+     +++ GLC    + +A
Sbjct: 455 GFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDA 514

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F  +       +V  YN++I G    G++ +A++L  ++    I+P   +FN+ I  
Sbjct: 515 FNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILS 574

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET-KAIGP 446
           FC+  K+  A++L + +  +G+ P + TY   + A C+E  +     ++  ME+   IG 
Sbjct: 575 FCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGT 634

Query: 447 THVTYTVVIKGLCKQWKLQ 465
              TY  V+  L K  + +
Sbjct: 635 KQHTYWPVVGALTKMGRFR 653



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/468 (21%), Positives = 189/468 (40%), Gaps = 50/468 (10%)

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
             Q F  +      L  ++ + G +  +  L+ ++ + G +        L+    +    
Sbjct: 102 FGQHFARDRSVRRALGDALLRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLA 161

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
           H A +++ ++    + P++  + A++        +  A + F  +    C  D   YN +
Sbjct: 162 HYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTL 221

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           + G  + G + EA++L +Q+    I P++VT+  L+ GFC   +V +A  +L+ +K  G+
Sbjct: 222 VHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGV 281

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
             +  TY + ++        +R   +L E          + Y  ++  L K    +EAV+
Sbjct: 282 SATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVE 341

Query: 470 LLEDM----YVIGVTPDQIT-------------------------------YNTIIRSFC 494
           L + M    Y++G T   I                                Y  II+SF 
Sbjct: 342 LAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFL 401

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           +CKD+ KA +  +QM    L  +  +YNI+ID     G+++ A   +  +QE   S   V
Sbjct: 402 RCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLV 461

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK-------------SFFCM--M 599
            + T+I  +   G+VH A  F   ++E G    +  +T              +F C   M
Sbjct: 462 TFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEM 521

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              G  P+ +   V++      G +    EL   M   G+ PD +  N
Sbjct: 522 SEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFN 569


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 222/421 (52%), Gaps = 3/421 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+V  + ++S+  K    ++   LF  M   G+  D +SYNI+I+ LC       AL  
Sbjct: 67  PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + G EPD +T S L  GF   +++  A  ++ K+   G  PD+V Y  +I G C+
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           IG V + ++L + M   G + + + Y+ L++ +C SGR  +A  L+ +M    + P+++T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ +I    K+ K  +A++LY EM  + + P+ F + +++ GLC    + EA+   D ++
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C+ DVV YN +I+G+ K   + E  +L+R++ ++ +    +T+N++I G+ + G+  
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A+ +   +      P+  TY+  +   C    +++ L L + M+   I     TY +VI
Sbjct: 367 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G+CK   +++A  L   +   G+ PD ++Y T+I  FC+ +   K+  L  +M    L 
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483

Query: 516 P 516
           P
Sbjct: 484 P 484



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 222/467 (47%), Gaps = 14/467 (2%)

Query: 83  ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
           + F+    G+ F     S+N            E    LFC M++    P    ++ ++  
Sbjct: 30  VPFISRFWGRTFSTKRSSMNL-----------EEEIDLFCKMIQSRPLPSIVDFSKVLSK 78

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           +  + + +  +   + M   G+  D  +Y+I+       S+   A  V+ K++  G +PD
Sbjct: 79  IAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD 138

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           +VT + LI G+CQ   V + + L   M   GF+ +V+ Y+ ++   CK G +++A+ L  
Sbjct: 139 VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD 198

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
            ME  G++ D VTY+ L+ GLC   +   A +L  +M  + I PN     A++    ++ 
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
             +EA   ++ +       DV  YN +I+G    G + EA Q+   ++ K   P +VT+N
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYN 318

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           +LI GFCK+ +V +  +L   +   GL    +TY T +  Y + G       +   M+++
Sbjct: 319 TLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
              P   TY++++ GLC  W++++A+ L E+M    +  D  TYN +I   CK  ++  A
Sbjct: 379 ---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDA 435

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           + L   +    L+P   +Y  +I G C       +D L   +QE  +
Sbjct: 436 WDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 190/350 (54%), Gaps = 3/350 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T S +I+G CQ +R+ DAI  + +     F P VV  N I+   CK+G    A  LF
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+  DA +YN L+ GLC +G   +A     DM    + P+ IT++ +   F   
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKE 257

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            + S A K+ +++  +  DPD+ TY  LI G C  G V+E  ++ ++M+++G   +V+ Y
Sbjct: 258 GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTY 317

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L++  CKS R+DE   L  EM   GL  D +TY+ +I+G  +  +   A ++++ M S
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 377

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +   PN   +  +L GLC    + +A + F+++  S    D+  YNI+I G  K+GN+ +
Sbjct: 378 R---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 434

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           A  L+R L  K + P +V++ ++I GFC+  +   +  L   ++  GL P
Sbjct: 435 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 200/383 (52%), Gaps = 3/383 (0%)

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D+ +Y ++I   C+       L +   M+  G++ +V+  S L++  C+  R+ +A+ L+
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            +ME +G +PD+V Y+ +I G CK   V+ A++L++ M    +  ++  + +++ GLC  
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
              ++A      ++M + + +V+ +  +ID +VK G   EA++LY ++  + + P + T+
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           NSLI G C +G+V +A+++LD +   G  P  VTY T +N +C+   +     L +EM  
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           + +    +TY  +I+G  +  +   A ++   M      P+  TY+ ++   C    + K
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEK 399

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A  L   M    +E    TYNI+I G+C  G++++A  L  SL    +    V+YTT+I 
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459

Query: 562 AHCAEGDVHKAMTFFCQMVEKGF 584
             C +    K+   + +M E G 
Sbjct: 460 GFCRKRQWDKSDLLYRKMQEDGL 482



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 212/430 (49%), Gaps = 9/430 (2%)

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           T+S      +L  +I    K+IQ   +    P IV ++ ++    +  N +  + L   M
Sbjct: 40  TFSTKRSSMNLEEEIDLFCKMIQSRPL----PSIVDFSKVLSKIAKSKNYDLVISLFHHM 95

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
              G   ++ +Y+++++ +C+  R   AL ++ +M   G +PD+VT S LI G C+ ++V
Sbjct: 96  EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRV 155

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             AI L ++M      P+   +  I+ G C+  ++ +A   FD +       D V YN +
Sbjct: 156 FDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL 215

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           + G    G   +A +L R ++ + I P+++TF ++I  F K GK ++A +L + +    +
Sbjct: 216 VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV 275

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           +P   TY + +N  C  G +     +L  M TK   P  VTY  +I G CK  ++ E  +
Sbjct: 276 DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK 335

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           L  +M   G+  D ITYNTII+ + +      A ++ ++M   +  P   TY+IL+ GLC
Sbjct: 336 LFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLC 392

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
           +N  ++ A  L  ++Q+  I L    Y  +I   C  G+V  A   F  +  KG +  + 
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452

Query: 590 DYTK--SFFC 597
            YT   S FC
Sbjct: 453 SYTTMISGFC 462



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 231/448 (51%), Gaps = 7/448 (1%)

Query: 3   AFVYSRTGM-VHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSE 58
            F   R+ M + + + +  KM +     SI  ++ +L  +   ++ D++  L+  ++V  
Sbjct: 40  TFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCG 99

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              ++Y+ +IVI+ LC+ SR   A+  + +     + P VV+++++++ +C+      A 
Sbjct: 100 IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 159

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M + G  PD   YN +I G C  G + +A+E  + M R GV  DA+TY+ L  G 
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               + S A ++++ ++++   P+++T+T +I  + + G   E +KL E M  +    +V
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+ L++ +C  GR+DEA  +L  M   G  PD+VTY+ LI G CK  +V +  +L+ E
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  + +  ++  +  I+ G  +      A+  F  +   +   ++  Y+I++ G      
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWR 396

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + +A+ L+  + +  I   I T+N +I+G CK G V DA  L  ++   GL+P  V+YTT
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 456

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGP 446
            ++ +C +    +   L ++M+   + P
Sbjct: 457 MISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 132/305 (43%), Gaps = 15/305 (4%)

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N+ E + L+ ++I+ R  PSIV F+ ++    K+        L   +++ G+     +Y 
Sbjct: 49  NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N  C        L+++ +M      P  VT + +I G C+  ++ +A+ L+  M  +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G  PD + YNTII   CK   +  A +L ++M    +   + TYN L+ GLC +G   +A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT----- 592
             L+  +   +I    + +T +I     EG   +AM  + +M  +  +  +  Y      
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288

Query: 593 ----------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                     K    +M++ G  PD      ++  F +   +    +L   M + GL+ D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348

Query: 643 KFLIN 647
               N
Sbjct: 349 TITYN 353



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 118/282 (41%), Gaps = 6/282 (2%)

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           F  +I S  +  +V ++ ++    K  N    + L+  +    I   + ++N +I   C+
Sbjct: 57  FCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCR 116

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
             +   A  ++  +   G EP  VT ++ +N +C+   +   + L+ +ME     P  V 
Sbjct: 117 CSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVI 176

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  +I G CK   + +AV+L + M   GV  D +TYN+++   C       A +L+  M 
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
           + ++ P   T+  +ID     G    A  L   +    +      Y ++I   C  G V 
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE 612
           +A      MV KG    +  Y        L NGF   + + E
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNT------LINGFCKSKRVDE 332


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 222/421 (52%), Gaps = 3/421 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+V  + ++S+  K    ++   LF  M   G+  D +SYNI+I+ LC       AL  
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + G EPD +T S L  GF   +++  A  ++ K+   G  PD+V Y  +I G C+
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           IG V + ++L + M   G + + + Y+ L++ +C SGR  +A  L+ +M    + P+++T
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ +I    K+ K  +A++LY EM  + + P+ F + +++ GLC    + EA+   D ++
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C+ DVV YN +I+G+ K   + E  +L+R++ ++ +    +T+N++I G+ + G+  
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A+ +   +      P+  TY+  +   C    +++ L L + M+   I     TY +VI
Sbjct: 308 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 364

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G+CK   +++A  L   +   G+ PD ++Y T+I  FC+ +   K+  L  +M    L 
Sbjct: 365 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 424

Query: 516 P 516
           P
Sbjct: 425 P 425



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 190/350 (54%), Gaps = 3/350 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T S +I+G CQ +R+ DAI  + +     F P VV  N I+   CK+G    A  LF
Sbjct: 79  DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 138

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+  DA +YN L+ GLC +G   +A     DM    + P+ IT++ +   F   
Sbjct: 139 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKE 198

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            + S A K+ +++  +  DPD+ TY  LI G C  G V+E  ++ ++M+++G   +V+ Y
Sbjct: 199 GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTY 258

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L++  CKS R+DE   L  EM   GL  D +TY+ +I+G  +  +   A ++++ M S
Sbjct: 259 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 318

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +   PN   +  +L GLC    + +A + F+++  S    D+  YNI+I G  K+GN+ +
Sbjct: 319 R---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 375

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           A  L+R L  K + P +V++ ++I GFC+  +   +  L   ++  GL P
Sbjct: 376 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 200/383 (52%), Gaps = 3/383 (0%)

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D+ +Y ++I   C+       L +   M+  G++ +V+  S L++  C+  R+ +A+ L+
Sbjct: 44  DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 103

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            +ME +G +PD+V Y+ +I G CK   V+ A++L++ M    +  ++  + +++ GLC  
Sbjct: 104 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 163

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
              ++A      ++M + + +V+ +  +ID +VK G   EA++LY ++  + + P + T+
Sbjct: 164 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 223

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           NSLI G C +G+V +A+++LD +   G  P  VTY T +N +C+   +     L +EM  
Sbjct: 224 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 283

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           + +    +TY  +I+G  +  +   A ++   M      P+  TY+ ++   C    + K
Sbjct: 284 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEK 340

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A  L   M    +E    TYNI+I G+C  G++++A  L  SL    +    V+YTT+I 
Sbjct: 341 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 400

Query: 562 AHCAEGDVHKAMTFFCQMVEKGF 584
             C +    K+   + +M E G 
Sbjct: 401 GFCRKRQWDKSDLLYRKMQEDGL 423



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 200/399 (50%), Gaps = 5/399 (1%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P IV ++ ++    +  N +  + L   M   G   ++ +Y+++++ +C+  R   AL +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           + +M   G +PD+VT S LI G C+ ++V  AI L ++M      P+   +  I+ G C+
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
             ++ +A   FD +       D V YN ++ G    G   +A +L R ++ + I P+++T
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           F ++I  F K GK ++A +L + +    ++P   TY + +N  C  G +     +L  M 
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
           TK   P  VTY  +I G CK  ++ E  +L  +M   G+  D ITYNTII+ + +     
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
            A ++ ++M   +  P   TY+IL+ GLC+N  ++ A  L  ++Q+  I L    Y  +I
Sbjct: 308 AAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 364

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC 597
              C  G+V  A   F  +  KG +  +  YT   S FC
Sbjct: 365 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 403



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 213/405 (52%), Gaps = 3/405 (0%)

Query: 42  RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSL 101
           ++ D++  L+  ++V     ++Y+ +IVI+ LC+ SR   A+  + +     + P VV++
Sbjct: 24  KNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTV 83

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           +++++ +C+      A  L   M + G  PD   YN +I G C  G + +A+E  + M R
Sbjct: 84  SSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER 143

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            GV  DA+TY+ L  G     + S A ++++ ++++   P+++T+T +I  + + G   E
Sbjct: 144 DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSE 203

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            +KL E M  +    +V  Y+ L++ +C  GR+DEA  +L  M   G  PD+VTY+ LI 
Sbjct: 204 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 263

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           G CK  +V +  +L+ EM  + +  ++  +  I+ G  +      A+  F  +   +   
Sbjct: 264 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRP 320

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           ++  Y+I++ G      + +A+ L+  + +  I   I T+N +I+G CK G V DA  L 
Sbjct: 321 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 380

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
            ++   GL+P  V+YTT ++ +C +    +   L ++M+   + P
Sbjct: 381 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 161/303 (53%), Gaps = 8/303 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
           + G+V+DAV +  +M+   ++    TYNSL+  L    R +D    L  D+ + +   NV
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA-RLMRDMVMRDIVPNV 185

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + VID   ++ +  +A+   +E   +   P V + N++++  C  G  + AK +  L
Sbjct: 186 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 245

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G  PD  +YN LI+G C +  ++E  +   +M + G+  D ITY+ + +G+    +
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 305

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A ++  ++    S P+I TY++L+ G C    VE+ L L E M     +L++  Y++
Sbjct: 306 PDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 362

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++  MCK G +++A  L   +   GLKPD+V+Y+ +I G C++ +  K+  LY +M    
Sbjct: 363 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 422

Query: 304 ISP 306
           + P
Sbjct: 423 LLP 425



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 169/326 (51%), Gaps = 6/326 (1%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSI 68
           V DA+ +++KM+E+  +  +  YN+++       ++ D   L+D ++      +  T + 
Sbjct: 96  VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 155

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++ GLC   R  DA   +++   ++  P+V++  A++  + K G    A  L+  M +  
Sbjct: 156 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 215

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + PD F+YN LI+GLC+ G ++EA +  + M   G  PD +TY+ L  GF    ++    
Sbjct: 216 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 275

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           K+ +++  +G   D +TY  +I GY Q G  +     +E+      + N+  YS+LL  +
Sbjct: 276 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA---QEIFSRMDSRPNIRTYSILLYGL 332

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C + R+++AL L   M+   ++ D+ TY+I+I G+CK   V  A  L+  +  K + P+ 
Sbjct: 333 CMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 392

Query: 309 FAHGAILLGLCEKEMITEARMYFDSL 334
            ++  ++ G C K    ++ + +  +
Sbjct: 393 VSYTTMISGFCRKRQWDKSDLLYRKM 418



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 125/294 (42%), Gaps = 15/294 (5%)

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +I+ R  PSIV F+ ++    K+        L   +++ G+     +Y   +N  C    
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
               L+++ +M      P  VT + +I G C+  ++ +A+ L+  M  +G  PD + YNT
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           II   CK   +  A +L ++M    +   + TYN L+ GLC +G   +A  L+  +   +
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------K 593
           I    + +T +I     EG   +AM  + +M  +  +  +  Y                K
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               +M++ G  PD      ++  F +   +    +L   M + GL+ D    N
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 294



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 117/279 (41%), Gaps = 6/279 (2%)

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +I S  +  +V ++ ++    K  N    + L+  +    I   + ++N +I   C+  +
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
              A  ++  +   G EP  VT ++ +N +C+   +   + L+ +ME     P  V Y  
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I G CK   + +AV+L + M   GV  D +TYN+++   C       A +L+  M + +
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           + P   T+  +ID     G    A  L   +    +      Y ++I   C  G V +A 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE 612
                MV KG    +  Y        L NGF   + + E
Sbjct: 241 QMLDLMVTKGCLPDVVTYNT------LINGFCKSKRVDE 273


>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
          Length = 693

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 253/553 (45%), Gaps = 49/553 (8%)

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           +M  Y + G    A  +  LM K G  PD    N+ ++ L +AG +++ALEF   M R G
Sbjct: 135 LMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVG 194

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           VEP                                   D+ TY  LI G C    V + +
Sbjct: 195 VEP-----------------------------------DVYTYNCLIKGLCGARRVVDAM 219

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA-VGLKPDLVTYSILIRG 282
           ++  VML  G   + I+Y  ++S +CK  R++E  GLL  M    GL PD VTY++LI G
Sbjct: 220 EMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHG 279

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           L K     +A++   E   KR   +   + AI+   C    + EA+     +I   C  D
Sbjct: 280 LAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPD 339

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           VV Y+ ++DG+ ++G + +A ++ + + +    P+ VT  +L+ G CK GK ++A  LL+
Sbjct: 340 VVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLN 399

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
             +     PS +TY+  M+ +  EG ++    ++ +M  K   PT V   ++I  LCK  
Sbjct: 400 KSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDG 459

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           K  EA   +E     G T + + + T+I  F +  DL  A  L++ M+L N  P   TY 
Sbjct: 460 KPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYT 519

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV------------- 569
           +++D L   G LK A  L+  +    +  T V Y T+I  +C +G++             
Sbjct: 520 VVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLAR 579

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
            +  + + Q+VEK       +   S    +L      D + C +++ +F   G     + 
Sbjct: 580 QEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYN 639

Query: 630 LAAVMIKSGLLPD 642
           +A  M +  L+PD
Sbjct: 640 VACRMFRRNLIPD 652



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 256/520 (49%), Gaps = 8/520 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKE----LDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVS 57
           L   YSR G +  A+ V+  M++     D+ +     N L+   R  D   +  + ++  
Sbjct: 135 LMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGR-VDKALEFAERMRRV 193

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +VYT + +I GLC   R+ DA+  +         P  +S   +MS  CK    E  
Sbjct: 194 GVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEV 253

Query: 118 KGLFCLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           +GL   M    GL PD  +YN+LIHGL   G  +EALEF  +        D + YS +  
Sbjct: 254 RGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVH 313

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F L  +++ A +++ +++ KG  PD+VTY+ ++ G+C+IG +++  K+ + M     K 
Sbjct: 314 SFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKP 373

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N + ++ LL+ +CK G+  EA  LL + E     P  +TYS+++ G  ++ K+ ++  + 
Sbjct: 374 NTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVV 433

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M  K   P +     ++  LC+     EA+ + +      C  +VV +  +I G+ + 
Sbjct: 434 VQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQ 493

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G++  A+ L   +      P +VT+  ++    K G++ +A  L++ +   GL P+ VTY
Sbjct: 494 GDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTY 553

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T ++ YCE+GN++ LL LL++M  +        Y  V++ LC   KL EA  LL  +  
Sbjct: 554 RTVIHRYCEKGNLEDLLNLLEKMLARQ--EMKSAYNQVVEKLCAFGKLNEAYSLLYKILR 611

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
                D  T + ++ SF       +A+ +  +M+  NL P
Sbjct: 612 TASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIP 651



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 209/437 (47%), Gaps = 21/437 (4%)

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           +  L+  Y + G +   +++  +M   G   ++   ++ ++ +  +GR+D+AL     M 
Sbjct: 132 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMR 191

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
            VG++PD+ TY+ LI+GLC   +V  A+++   M      P+  ++  ++  LC+++ + 
Sbjct: 192 RVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVE 251

Query: 326 EARMYFDSLIM-SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
           E R     +   +    D V YN++I G  K G+  EA++  R+   KR     V ++++
Sbjct: 252 EVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAI 311

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           ++ FC NG++A+A+ ++  +   G +P  VTY+T ++ +C  G + +   +++ M     
Sbjct: 312 VHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDC 371

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  VT+T ++ GLCK  K  EA +LL        TP  ITY+ ++  F +   L+++  
Sbjct: 372 KPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCD 431

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           ++ QM      PT+   N+LI  LC +G    A   +   Q    ++  V +TT+I    
Sbjct: 432 VVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFS 491

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
            +GD+  A++    M                    LSN  P       V++ A  + G L
Sbjct: 492 RQGDLESALSLMDDMY-------------------LSNRHPDVVTY-TVVVDALGKKGRL 531

Query: 625 GSVFELAAVMIKSGLLP 641
                L   M+  GLLP
Sbjct: 532 KEATGLVEKMLNRGLLP 548


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 244/527 (46%), Gaps = 7/527 (1%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQE---TAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           PR+   NS+V D L +  R+ +A+    +     GK+    V     +M  YC  G    
Sbjct: 256 PRDFTYNSVV-DVLVKVGRMDEALRLKDQMLLATGKKM--DVFLATTLMQGYCLHGEIGK 312

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF   ++ G+ P   +Y +LI G    G  +E  +    M   G+ P    ++++ K
Sbjct: 313 ALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIK 372

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G     Q   A  +   L++    PD+ TY  LI    +   V E + L + M   G K 
Sbjct: 373 GLLRNKQWEDAIALFD-LVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKP 431

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +++    LL   C+ G +DEAL L  EM   G  P+ VTY+ L++G  K+    KA  L 
Sbjct: 432 SIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALL 491

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           NEM    +S   + +  ++ GLC  + + E        +    +   + YN +I+G+VK 
Sbjct: 492 NEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKA 551

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G +G A+ +YRQ+ EK I+P+IVT+ S I G+C+      A +LL  ++ +G+ P    Y
Sbjct: 552 GMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAY 611

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
             F+N +C++GN+   L  L  +    + P    Y   + G      + EA +    M  
Sbjct: 612 NAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIK 671

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             +  D   Y T+I  F K  ++  A +L ++M  ++  P   T+  L  GLC +GD+  
Sbjct: 672 QRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDG 731

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           A  LL  +   ++    V Y  +I AH  +G + +A     +M+  G
Sbjct: 732 AKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSG 778



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 153/564 (27%), Positives = 261/564 (46%), Gaps = 19/564 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME-EALE 154
           P   S   ++    +   A  A  LF  M   G + DA  Y++++   C+ G M  +A+ 
Sbjct: 151 PDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRA-CVVGRMHGDAVR 209

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
             ++M   GV+PD   Y+I   G   L     A +V+ K+   G  P   TY  ++    
Sbjct: 210 LFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLV 269

Query: 215 QIGNVEEGLKLREVML-SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           ++G ++E L+L++ ML + G K++V   + L+   C  G I +AL L  E    G+ P  
Sbjct: 270 KVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTN 329

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VTY++LI+G   +    +  +L  +M  + + P+++    ++ GL   +   +A   FD 
Sbjct: 330 VTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFD- 388

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L++   + DV  Y  +I    K   + EAV L+ ++ E  + PSIVT +SL+ G+C+ G 
Sbjct: 389 LVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGC 448

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + +A +L   +   G  P+ VTYTT M  Y ++    +  ALL EM    +     TY +
Sbjct: 449 MDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNI 508

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I GLC   ++ E  ++L+     G  P  +TYN+II  F K   +  A  +  QM    
Sbjct: 509 LINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKG 568

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           + P   TY   IDG C       A  LL+ ++ + I     AY   I   C +G++  A+
Sbjct: 569 ITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHAL 628

Query: 574 TFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAF 618
            F   +++ G   ++  Y                  F+  M+      D EI   ++  F
Sbjct: 629 HFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGF 688

Query: 619 HQGGDLGSVFELAAVMIKSGLLPD 642
            + G++    EL + M+ +  +PD
Sbjct: 689 SKVGNVAFALELYSEMLANHNIPD 712



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 161/591 (27%), Positives = 261/591 (44%), Gaps = 18/591 (3%)

Query: 74  CQQSRLQ-DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           C   R+  DA+    E AG    P        ++  CKL  A+ A  +   M + GL P 
Sbjct: 198 CVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPR 257

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMG-RHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
            F+YN ++  L   G M+EAL   + M    G + D    + L +G+ L  +I  A  + 
Sbjct: 258 DFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLF 317

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            + +  G  P  VTYTVLI G    G  +E  KL   M+ QG   +   +++++  + ++
Sbjct: 318 DEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRN 377

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            + ++A+ L   +   G+ PD+ TY  LI  L K  KVH+A+ L+++M    + P+    
Sbjct: 378 KQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTC 436

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
            ++LLG CEK  + EA   +  +       + V Y  ++ GY+K     +A  L  ++ +
Sbjct: 437 HSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQ 496

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
             +S    T+N LI G C   +V +   +L      G  P+ +TY + +N + + G +  
Sbjct: 497 NGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGS 556

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            LA+ ++M  K I P  VTYT  I G C+      AV+LL  M   G+ PD   YN  I 
Sbjct: 557 ALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFIN 616

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            FCK  ++  A   L  +    L P    YN  + G      +  A     S+ +  I+ 
Sbjct: 617 MFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAA 676

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMV-------EKGFEISIR--------DYTKSFF 596
               YTT+I      G+V  A+  + +M+       +K F             D  K   
Sbjct: 677 DTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLL 736

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             M      P+     +++ A  + G L   F+L   M+ SG++PD    N
Sbjct: 737 DDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTYN 787



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 148/549 (26%), Positives = 238/549 (43%), Gaps = 40/549 (7%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPR-NVYTNSIVI 70
           AV V+ KM+E  LK    TYNS+   L  +   D    L D + ++   + +V+  + ++
Sbjct: 242 AVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLM 301

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
            G C    +  A+    E       P+ V+   ++      G  +    L   M++ GL 
Sbjct: 302 QGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLL 361

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P  + +N++I GL      E+A+   + +   GV PD  TY  L        ++  A  +
Sbjct: 362 PSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNL 420

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
             K+   G  P IVT   L+ GYC+ G ++E LKL   M  +GF  N + Y+ L+    K
Sbjct: 421 WDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIK 480

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
               D+A  LL EM   G+     TY+ILI GLC  D+V +  ++     S+   P +  
Sbjct: 481 KKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMT 540

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + +I+ G  +  M+  A   +  +       ++V Y   IDGY +      AV+L   + 
Sbjct: 541 YNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMR 600

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY------- 423
              I P I  +N+ I  FCK G ++ A   L  +   GL P+   Y +F+  Y       
Sbjct: 601 CNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMA 660

Query: 424 ----------------------------CEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
                                        + GN+   L L  EM      P   T+T + 
Sbjct: 661 EASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALT 720

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLC+   +  A +LL+DM  + V P+ +TYN +I +  +   L++AFQL ++M    + 
Sbjct: 721 HGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVV 780

Query: 516 PTSATYNIL 524
           P   TYNI 
Sbjct: 781 PDDTTYNIF 789



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 218/450 (48%), Gaps = 10/450 (2%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYN----SLLYNLRHTDI--MWDLYDDIKVSETPRNV 63
           GM  +   +  +M E  L  S   +N     LL N +  D   ++DL  D  V +    V
Sbjct: 343 GMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGVPD----V 398

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +T   +I  L +  ++ +A+    +       PS+V+ ++++  YC+ G  + A  L+  
Sbjct: 399 FTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSE 458

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G  P+  +Y  L+ G     + ++A    N+M ++GV     TY+IL  G  ++ +
Sbjct: 459 MPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDR 518

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +    +++++ + +G  P  +TY  +I G+ + G +   L +   M  +G   N++ Y+ 
Sbjct: 519 VCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTS 578

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
            +   C++   D A+ LL  M   G+ PD+  Y+  I   CKQ  +  A+     +    
Sbjct: 579 FIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDG 638

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++PN   + + + G    +M+ EA  ++ S+I      D  +Y  +IDG+ K+GN+  A+
Sbjct: 639 LTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFAL 698

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +LY +++     P   TF +L +G C++G +  A+RLLD +    + P+ VTY   +NA+
Sbjct: 699 ELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAH 758

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
             +G +Q    L  +M +  + P   TY +
Sbjct: 759 IRDGKLQEAFQLHDKMLSSGVVPDDTTYNI 788



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 32/274 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + + GM+  A+ +  +M E  +  +I TY S                             
Sbjct: 548 FVKAGMMGSALAMYRQMCEKGITPNIVTYTSF---------------------------- 579

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
               IDG C+ +    A+  L         P + + NA ++ +CK G    A     L+L
Sbjct: 580 ----IDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLL 635

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K GL P+   YN  + G      M EA +F   M +  +  D   Y+ L  GF  +  ++
Sbjct: 636 KDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVA 695

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A ++  ++L   + PD  T+T L  G C+ G+++   +L + M       N + Y++L+
Sbjct: 696 FALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLI 755

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           ++  + G++ EA  L  +M + G+ PD  TY+I 
Sbjct: 756 NAHIRDGKLQEAFQLHDKMLSSGVVPDDTTYNIF 789


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 222/411 (54%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           S++  ++  D++  L++ +++      +YT +IV++ +C+ S+   A  FL +     F 
Sbjct: 90  SVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFE 149

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P +V+  +++  +C     E A  LF  ++  G  P+  +Y  LIH LC    +  A+E 
Sbjct: 150 PDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEI 209

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            N MG +G+ P+ +TY+ L  G   + + S A  +++ ++ +G  P+++T+T LI  + +
Sbjct: 210 FNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVK 269

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +G + E  +L +VM+      +V  Y+ L++ +C  GR+DEA  + Y ME+ G  P+ VT
Sbjct: 270 VGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVT 329

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G CK  +V    +++ EM  K +  N+  +  ++ G C       A+  F+ + 
Sbjct: 330 YTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMG 389

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D+  YN+++DG    G + +A+ +++ + ++ +  +IVT+  +I G CK GKV 
Sbjct: 390 SRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVE 449

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           DA  L  ++   G++P+ +TYTT ++ +C  G I    AL ++M+     P
Sbjct: 450 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLP 500



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 217/435 (49%)

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
            EAL+    M      P  + ++ L      + +      + +++ I G  P + T  ++
Sbjct: 64  NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIV 123

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           +   C+             M+  GF+ +++ ++ LL   C   RI++AL L  ++  +G 
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           +P++VTY+ LI  LCK   ++ A++++N+M    I PN   + +++ GLCE    ++A  
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               ++      +V+ +  +ID +VK+G I EA +LY+ +I+  + P + T+ +LI G C
Sbjct: 244 LLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLC 303

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
             G++ +AR++   ++ +G  P+ VTYTT ++ +C+   ++    +  EM  K +    +
Sbjct: 304 TYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTI 363

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TYTV+I+G C   +   A ++   M      PD  TYN ++   C    + KA  +   M
Sbjct: 364 TYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYM 423

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               ++    TY I+I G+C  G +++A  L  SL    +    + YTT+I   C  G +
Sbjct: 424 RKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFI 483

Query: 570 HKAMTFFCQMVEKGF 584
           H+A   F +M E GF
Sbjct: 484 HEADALFKKMKEDGF 498



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 221/453 (48%), Gaps = 16/453 (3%)

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
           IL  G H L Q + A  +  +++     P IV +T L+    ++   +  + L E M   
Sbjct: 53  ILRNGLHNL-QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQIL 111

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G    +   +++++ +C+S +   A   L +M  +G +PDLVT++ L+ G C  +++  A
Sbjct: 112 GISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDA 171

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           + L++++      PN   +  ++  LC+   +  A   F+ +  +    +VV YN ++ G
Sbjct: 172 LALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSG 231

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
             ++G   +A  L R ++++ I P+++TF +LI  F K GK+ +A+ L   +    + P 
Sbjct: 232 LCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPD 291

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             TYT  +N  C  G +     +   ME+    P  VTYT +I G CK  ++++  ++  
Sbjct: 292 VFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFY 351

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +M   G+  + ITY  +I+ +C       A ++ NQM      P   TYN+L+DGLC NG
Sbjct: 352 EMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNG 411

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            ++ A  +   +++  + +  V YT II+  C  G V  A   FC +  KG + ++  YT
Sbjct: 412 YVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYT 471

Query: 593 K--SFFCM-------------MLSNGFPPDQEI 610
              S FC              M  +GF P++ +
Sbjct: 472 TMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 219/424 (51%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+V    ++S   K+   +V   LF  M   G+ P  ++ NI+++ +C +     A  F
Sbjct: 80  PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + G EPD +T++ L  GF   ++I  A  +  +++  G  P++VTYT LI   C+
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
             ++   +++   M   G + NV+ Y+ L+S +C+ GR  +A  LL +M   G++P+++T
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ LI    K  K+ +A +LY  M    + P+ F + A++ GLC    + EAR  F  + 
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            +    + V Y  +I G+ K   + +  +++ ++ +K +  + +T+  LI G+C  G+  
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPD 379

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A+ + + +      P   TY   ++  C  G +++ L + + M  + +    VTYT++I
Sbjct: 380 VAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIII 439

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           +G+CK  K+++A  L   ++  G+ P+ ITY T+I  FC+   + +A  L  +M      
Sbjct: 440 QGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFL 499

Query: 516 PTSA 519
           P  +
Sbjct: 500 PNES 503



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 187/351 (53%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T + ++ G C  +R++DA+    +  G  F P+VV+   ++   CK      A  +F
Sbjct: 151 DLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIF 210

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G+ P+  +YN L+ GLC  G   +A     DM + G++P+ IT++ L   F  +
Sbjct: 211 NQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKV 270

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A ++ + ++     PD+ TYT LI G C  G ++E  ++  +M S G+  N + Y
Sbjct: 271 GKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTY 330

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   CKS R+++   + YEM   GL  + +TY++LI+G C   +   A +++N+M S
Sbjct: 331 TTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGS 390

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +R  P+   +  +L GLC    + +A M F  +       ++V Y I+I G  K+G + +
Sbjct: 391 RRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVED 450

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           A  L+  L  K + P+++T+ ++I GFC+ G + +A  L   +K  G  P+
Sbjct: 451 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 214/446 (47%), Gaps = 1/446 (0%)

Query: 38  LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPS 97
           L+NL+  + + DL+  +  S    ++   + ++  + +  R    I   ++       P 
Sbjct: 58  LHNLQFNEAL-DLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPV 116

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           + + N +M+  C+      A      M+K G  PD  ++  L+HG C    +E+AL   +
Sbjct: 117 LYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFD 176

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            +   G  P+ +TY+ L         ++ A ++  ++   G  P++VTY  L+ G C+IG
Sbjct: 177 QIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIG 236

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
              +   L   M+ +G + NVI ++ L+ +  K G+I EA  L   M  + + PD+ TY+
Sbjct: 237 RWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYT 296

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            LI GLC   ++ +A Q++  M S    PN   +  ++ G C+ + + +    F  +   
Sbjct: 297 ALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQK 356

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
             + + + Y ++I GY  +G    A +++ Q+  +R  P I T+N L+ G C NG V  A
Sbjct: 357 GLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKA 416

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             +   ++   ++ + VTYT  +   C+ G ++    L   + +K + P  +TYT +I G
Sbjct: 417 LMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 476

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            C++  + EA  L + M   G  P++
Sbjct: 477 FCRRGFIHEADALFKKMKEDGFLPNE 502



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 177/326 (54%), Gaps = 3/326 (0%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSI 68
           + DA+ +  ++  +  + ++ TY +L++ L   RH +   ++++ +  +    NV T + 
Sbjct: 168 IEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNS 227

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++ GLC+  R  DA   L++   +   P+V++  A++  + K+G    AK L+ +M++  
Sbjct: 228 LVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMS 287

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           ++PD F+Y  LI+GLC  G ++EA +    M  +G  P+ +TY+ L  GF    ++    
Sbjct: 288 VYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGT 347

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           K+  ++  KG   + +TYTVLI GYC +G  +   ++   M S+    ++  Y+VLL  +
Sbjct: 348 KIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGL 407

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C +G +++AL +   M    +  ++VTY+I+I+G+CK  KV  A  L+  + SK + PN 
Sbjct: 408 CYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNV 467

Query: 309 FAHGAILLGLCEKEMITEARMYFDSL 334
             +  ++ G C +  I EA   F  +
Sbjct: 468 ITYTTMISGFCRRGFIHEADALFKKM 493



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 20/234 (8%)

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           PS V +T  ++   +      +++L ++M+   I P   T  +V+  +C+  +   A   
Sbjct: 80  PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L  M  +G  PD +T+ +++  FC    +  A  L +Q+      P   TY  LI  LC 
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
           N  L +A  +   + ++ I    V Y +++   C  G    A      M+++G + ++  
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           +T                     ++ AF + G +    EL  VMI+  + PD F
Sbjct: 260 FT--------------------ALIDAFVKVGKIMEAKELYKVMIQMSVYPDVF 293



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/207 (19%), Positives = 76/207 (36%), Gaps = 15/207 (7%)

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  +++      +  EA+ L   M      P  + +  ++    K K       L  QM 
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
           +  + P   T NI+++ +C +     A C L  + +       V +T+++   C    + 
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVML 615
            A+  F Q+V  GF  ++  YT    C+               M  NG  P+      ++
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPD 642
               + G       L   M+K G+ P+
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKRGIQPN 256


>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
          Length = 938

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 155/593 (26%), Positives = 265/593 (44%), Gaps = 54/593 (9%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSI 68
           V +A+ V A+M E+ +K   + Y+S L  L      D+ + +  +I   + P      ++
Sbjct: 358 VDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNM 417

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           V+DGLC++ RL +A   L+  A                                   + G
Sbjct: 418 VMDGLCKEMRLDEAEKLLENKA-----------------------------------RQG 442

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
            +PD + Y+ LI   C  G++  A++    M  HG+E +    S L + F  L   S A 
Sbjct: 443 SNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAI 502

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
               K    G   D V Y + +  YC+ GN+ E +KL   M   G   + I Y+ L+S  
Sbjct: 503 AYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGY 562

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C  G +  A  +  EM    ++PD+VTY+IL  G CK   V +   L + M  + + PNS
Sbjct: 563 CLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNS 622

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +G  ++G C    ++EA + F+ +         V+Y+ M+ GY+  G    A  L+ +
Sbjct: 623 LTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVR 682

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  +       + + LI   C+ G V  A  +   +  H + P  ++Y+  ++ YC+ G+
Sbjct: 683 VARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGD 742

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           + +      +M  + +    + YT+++ G CK  +LQEA QL   M  +G+ PD I Y  
Sbjct: 743 MDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 802

Query: 489 IIRSFCK---------CKDLRKAF-------QLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           ++    K             R++F       +LL+ M    +EP    Y +LIDG C   
Sbjct: 803 LLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAE 862

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            L  A  L   + +  ++    AYT +I  +C++G++ KA     +M++KG E
Sbjct: 863 YLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIE 915



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 157/649 (24%), Positives = 283/649 (43%), Gaps = 69/649 (10%)

Query: 30  SIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           S+ T+N LL  +  T   +++   Y+++K  +   +VYT +IV   L Q  ++ +A+   
Sbjct: 306 SVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVW 365

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            E                                   M + G+ PDA  Y+  + GLC  
Sbjct: 366 AE-----------------------------------MTEMGVKPDARGYSSFLIGLCDC 390

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G  + A     ++ R  V  +A+ Y+++  G     ++  A K+++    +GS+PD+  Y
Sbjct: 391 GKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGY 450

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           + LI  YC++GN+   +   E M+S G + N    S LL    K G   EA+    + + 
Sbjct: 451 SYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKD 510

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            GL  D V Y+I +   CK   +++A++L NEM    ++P+   +  ++ G C K  +  
Sbjct: 511 SGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQN 570

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A+  F+ ++ +N   D+V YNI+  G+ K G + E   L  ++ ++ + P+ +T+   I 
Sbjct: 571 AQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIV 630

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           GFC+ G +++A  L + ++  G++   V Y++ +  Y   G       L   +  +    
Sbjct: 631 GFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLV 690

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
            H + + +I  LC+   +Q A  + + M    V PD I+Y+ +I  +C+  D+ KA    
Sbjct: 691 DHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWF 750

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA- 565
           + M    L      Y IL++G C  G L+ A  L V +    I    +AYT ++  H   
Sbjct: 751 HDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKE 810

Query: 566 ------EGDVHKAMTFFCQMVEKGFEISIRD---------YT---------------KSF 595
                 EG   +  +F  +        S++D         YT               +  
Sbjct: 811 TLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEAREL 870

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           F  ML  G  PD      ++  +   G++    +L   MI  G+ PD+ 
Sbjct: 871 FDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDEL 919



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 243/523 (46%), Gaps = 20/523 (3%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  + + G+ P  +++N+L+  +   G  E  L   N+M    + PD  T++I+ +   
Sbjct: 294 LFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLF 353

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A +V  ++   G  PD   Y+  + G C  G  +    + + +  +   +  +
Sbjct: 354 QAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAM 413

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           AY++++  +CK  R+DEA  LL      G  PD+  YS LIR  CK   +  A+  Y  M
Sbjct: 414 AYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAM 473

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            S  I  N      +L    +  M +EA  YF     S    D V+YNI +D Y K GN+
Sbjct: 474 VSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNM 533

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EAV+L  ++    ++P  + +  LI G+C  G++ +A+++ + +    +EP  VTY   
Sbjct: 534 NEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNIL 593

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
            + +C+ G +  +  LL  M  + + P  +TY + I G C+   L EA  L   +   G+
Sbjct: 594 ASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGI 653

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
              ++ Y++++  +        A+ L  ++          + + LI+ LC  G+++ A  
Sbjct: 654 DHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASN 713

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           +   + EH++    ++Y+ +I  +C  GD+ KA  +F  MV++G  + +  YT      +
Sbjct: 714 VCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYT------I 767

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           L NG+      C        + G L    +L   M   G+ PD
Sbjct: 768 LMNGY------C--------KAGRLQEACQLFVQMTNLGIKPD 796



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 94/453 (20%), Positives = 166/453 (36%), Gaps = 65/453 (14%)

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           SV+ +  C   R   A     + +++G   D  TYS +I+ L    +    + L++E+ S
Sbjct: 186 SVVQTLHCLKRRPAIAFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVS 245

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
                +S A G  +L L +    T A     S  M +C         +I   +   ++  
Sbjct: 246 -----SSNASGPEILPLVDHHRRTCATPCSLSF-MVDC---------LIKACITCYDVQA 290

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            + L+  +    + PS+ T+N L+    + G+        + +K   L P   T+     
Sbjct: 291 TICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTR 350

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           +  +   +   L +  EM    + P    Y+  + GLC   K   A  +L+++    V  
Sbjct: 351 SLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPV 410

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA---- 537
           + + YN ++   CK   L +A +LL         P    Y+ LI   C  G+L NA    
Sbjct: 411 EAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHY 470

Query: 538 ----------DCLLVS---------------------LQEHNISLTKVAYTTIIKAHCAE 566
                     +C +VS                      ++  + L KV Y   +  +C  
Sbjct: 471 EAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKN 530

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEIC 611
           G++++A+    +M   G       YT               +  F  ML     PD    
Sbjct: 531 GNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTY 590

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
            ++   F + G +  VF+L   M   GL P+  
Sbjct: 591 NILASGFCKSGLVMEVFDLLDRMADQGLEPNSL 623


>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
          Length = 820

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 155/593 (26%), Positives = 265/593 (44%), Gaps = 54/593 (9%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSI 68
           V +A+ V A+M E+ +K   + Y+S L  L      D+ + +  +I   + P      ++
Sbjct: 240 VDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNM 299

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           V+DGLC++ RL +A   L+  A                                   + G
Sbjct: 300 VMDGLCKEMRLDEAEKLLENKA-----------------------------------RQG 324

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
            +PD + Y+ LI   C  G++  A++    M  HG+E +    S L + F  L   S A 
Sbjct: 325 SNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAI 384

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
               K    G   D V Y + +  YC+ GN+ E +KL   M   G   + I Y+ L+S  
Sbjct: 385 AYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGY 444

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C  G +  A  +  EM    ++PD+VTY+IL  G CK   V +   L + M  + + PNS
Sbjct: 445 CLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNS 504

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +G  ++G C    ++EA + F+ +         V+Y+ M+ GY+  G    A  L+ +
Sbjct: 505 LTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVR 564

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  +       + + LI   C+ G V  A  +   +  H + P  ++Y+  ++ YC+ G+
Sbjct: 565 VARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGD 624

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           + +      +M  + +    + YT+++ G CK  +LQEA QL   M  +G+ PD I Y  
Sbjct: 625 MDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 684

Query: 489 IIRSFCK---------CKDLRKAF-------QLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           ++    K             R++F       +LL+ M    +EP    Y +LIDG C   
Sbjct: 685 LLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAE 744

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            L  A  L   + +  ++    AYT +I  +C++G++ KA     +M++KG E
Sbjct: 745 YLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIE 797



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 157/649 (24%), Positives = 283/649 (43%), Gaps = 69/649 (10%)

Query: 30  SIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           S+ T+N LL  +  T   +++   Y+++K  +   +VYT +IV   L Q  ++ +A+   
Sbjct: 188 SVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVW 247

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            E                                   M + G+ PDA  Y+  + GLC  
Sbjct: 248 AE-----------------------------------MTEMGVKPDARGYSSFLIGLCDC 272

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G  + A     ++ R  V  +A+ Y+++  G     ++  A K+++    +GS+PD+  Y
Sbjct: 273 GKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGY 332

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           + LI  YC++GN+   +   E M+S G + N    S LL    K G   EA+    + + 
Sbjct: 333 SYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKD 392

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            GL  D V Y+I +   CK   +++A++L NEM    ++P+   +  ++ G C K  +  
Sbjct: 393 SGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQN 452

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A+  F+ ++ +N   D+V YNI+  G+ K G + E   L  ++ ++ + P+ +T+   I 
Sbjct: 453 AQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIV 512

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           GFC+ G +++A  L + ++  G++   V Y++ +  Y   G       L   +  +    
Sbjct: 513 GFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLV 572

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
            H + + +I  LC+   +Q A  + + M    V PD I+Y+ +I  +C+  D+ KA    
Sbjct: 573 DHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWF 632

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA- 565
           + M    L      Y IL++G C  G L+ A  L V +    I    +AYT ++  H   
Sbjct: 633 HDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKE 692

Query: 566 ------EGDVHKAMTFFCQMVEKGFEISIRD---------YT---------------KSF 595
                 EG   +  +F  +        S++D         YT               +  
Sbjct: 693 TLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEAREL 752

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           F  ML  G  PD      ++  +   G++    +L   MI  G+ PD+ 
Sbjct: 753 FDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDEL 801



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 242/509 (47%), Gaps = 13/509 (2%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LF  + + G+ P  +++N+L+  +   G  E  L   N+M    + PD  T++I+ +   
Sbjct: 176 LFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLF 235

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A +V  ++   G  PD   Y+  + G C  G  +    + + +  +   +  +
Sbjct: 236 QAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAM 295

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           AY++++  +CK  R+DEA  LL      G  PD+  YS LIR  CK   +  A+  Y  M
Sbjct: 296 AYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAM 355

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            S  I  N      +L    +  M +EA  YF     S    D V+YNI +D Y K GN+
Sbjct: 356 VSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNM 415

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EAV+L  ++    ++P  + +  LI G+C  G++ +A+++ + +    +EP  VTY   
Sbjct: 416 NEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNIL 475

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
            + +C+ G +  +  LL  M  + + P  +TY + I G C+   L EA  L   +   G+
Sbjct: 476 ASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGI 535

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
              ++ Y++++  +        A+ L  ++          + + LI+ LC  G+++ A  
Sbjct: 536 DHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASN 595

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           +   + EH++    ++Y+ +I  +C  GD+ KA  +F  MV++G  + +  YT      +
Sbjct: 596 VCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYT------I 649

Query: 600 LSNGFPPD---QEICEVMLIAFHQGGDLG 625
           L NG+      QE C++    F Q  +LG
Sbjct: 650 LMNGYCKAGRLQEACQL----FVQMTNLG 674



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 208/445 (46%), Gaps = 20/445 (4%)

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  P + T+ +L+    + G  E  L     M       +V  ++++  S+ ++ ++DEA
Sbjct: 184 GVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEA 243

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L +  EM  +G+KPD   YS  + GLC   K   A  +  E+  +++   + A+  ++ G
Sbjct: 244 LQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDG 303

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC++  + EA    ++        DV  Y+ +I  Y K+GN+  AV  Y  ++   I  +
Sbjct: 304 LCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETN 363

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
               + L+  F K G  ++A       K  GL    V Y   M+ YC+ GN+   + LL 
Sbjct: 364 CHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLN 423

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM+   + P  + YT +I G C + ++Q A Q+ E+M    + PD +TYN +   FCK  
Sbjct: 424 EMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSG 483

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            + + F LL++M    LEP S TY I I G C  G+L  A+ L   ++E  I   +V Y+
Sbjct: 484 LVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYS 543

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIA 617
           +++  +   G    A   F ++  +G      +    F C  L N      ++C V    
Sbjct: 544 SMVCGYLLSGWTDHAYMLFVRVARQG------NLVDHFSCSKLIN------DLCRV---- 587

Query: 618 FHQGGDLGSVFELAAVMIKSGLLPD 642
               G++     +  +M++  ++PD
Sbjct: 588 ----GNVQGASNVCKIMLEHDVVPD 608



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 94/453 (20%), Positives = 166/453 (36%), Gaps = 65/453 (14%)

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           SV+ +  C   R   A     + +++G   D  TYS +I+ L    +    + L++E+ S
Sbjct: 68  SVVQTLHCLKRRPAIAFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVS 127

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
                +S A G  +L L +    T A     S  M +C         +I   +   ++  
Sbjct: 128 -----SSNASGPEILPLVDHHRRTCATPCSLSF-MVDC---------LIKACITCYDVQA 172

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            + L+  +    + PS+ T+N L+    + G+        + +K   L P   T+     
Sbjct: 173 TICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTR 232

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           +  +   +   L +  EM    + P    Y+  + GLC   K   A  +L+++    V  
Sbjct: 233 SLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPV 292

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA---- 537
           + + YN ++   CK   L +A +LL         P    Y+ LI   C  G+L NA    
Sbjct: 293 EAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHY 352

Query: 538 ----------DCLLVS---------------------LQEHNISLTKVAYTTIIKAHCAE 566
                     +C +VS                      ++  + L KV Y   +  +C  
Sbjct: 353 EAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKN 412

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEIC 611
           G++++A+    +M   G       YT               +  F  ML     PD    
Sbjct: 413 GNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTY 472

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
            ++   F + G +  VF+L   M   GL P+  
Sbjct: 473 NILASGFCKSGLVMEVFDLLDRMADQGLEPNSL 505


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 194/343 (56%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           +L  GF LNV  +++L++  CK G I +A  +  E+    L+P +V+++ LI G CK   
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + +  +L ++M   R  P+ F + A++  LC++  +  A   FD +     I + V++  
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I G+ + G I    + Y++++ K + P IV +N+L+ GFCKNG +  AR ++D +   G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L P  +TYTT ++ +C  G+++  L + +EM+   I    V ++ ++ G+CK+ ++ +A 
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           + L +M   G+ PD +TY  ++ +FCK  D +  F+LL +M      P+  TYN+L++GL
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
           C  G +KNAD LL ++    +    + Y T+++ H    +  K
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 212/400 (53%), Gaps = 20/400 (5%)

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
           ++A+M  Y  LGF   A   F L  K+        +++ I G    G++ + +   N  G
Sbjct: 173 VDALMITYTDLGFIPDAIQCFRLSRKH-------RFDVPIRG---CGNLLDRMMKLNPTG 222

Query: 161 R----------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
                       G   +   ++IL   F     IS A KV  ++  +   P +V++  LI
Sbjct: 223 TIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLI 282

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            GYC++GN++EG +L+  M     + +V  YS L++++CK  ++D A GL  EM   GL 
Sbjct: 283 NGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI 342

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P+ V ++ LI G  +  ++    + Y +M SK + P+   +  ++ G C+   +  AR  
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            D +I      D + Y  +IDG+ + G++  A+++ +++ +  I    V F++L+ G CK
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK 462

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G+V DA R L  +   G++P  VTYT  M+A+C++G+ Q    LL+EM++    P+ VT
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT 522

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           Y V++ GLCK  +++ A  LL+ M  IGV PD ITYNT++
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 201/424 (47%), Gaps = 45/424 (10%)

Query: 2   LAFVYSRTGMVHDAV--FVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKV 56
           L   Y+  G + DA+  F +++    D  V I+   +LL     L  T  +W  Y +I  
Sbjct: 176 LMITYTDLGFIPDAIQCFRLSRKHRFD--VPIRGCGNLLDRMMKLNPTGTIWGFYMEILD 233

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           +  P NVY  +I+++  C++  + DA     E   +   P+VVS N +++ YCK+G  + 
Sbjct: 234 AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 293

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH-------------- 162
              L   M K    PD F+Y+ LI+ LC    M+ A    ++M +               
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353

Query: 163 ---------------------GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
                                G++PD + Y+ L  GF     +  A  ++  ++ +G  P
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D +TYT LI G+C+ G+VE  L++R+ M   G +L+ + +S L+  MCK GR+ +A   L
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            EM   G+KPD VTY++++   CK+       +L  EM S    P+   +  +L GLC+ 
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             +  A M  D+++    + D + YN +++G+ +  N   + + Y Q  E  I   + ++
Sbjct: 534 GQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN---SSKRYIQKPEIGIVADLASY 590

Query: 382 NSLI 385
            S++
Sbjct: 591 KSIV 594



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 165/353 (46%), Gaps = 20/353 (5%)

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
            Y E+       N +    ++   C++  I++A+  FD +   +    VV +N +I+GY 
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K+GN+ E  +L  Q+ + R  P + T+++LI   CK  K+  A  L D +   GL P+ V
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            +TT ++ +   G I  +    Q+M +K + P  V Y  ++ G CK   L  A  +++ M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+ PD+ITY T+I  FC+  D+  A ++  +M  + +E     ++ L+ G+C  G +
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
            +A+  L  +    I    V YT ++ A C +GD         +M   G   S+  Y   
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN-- 524

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               +L NG      +C++        G + +   L   M+  G++PD    N
Sbjct: 525 ----VLLNG------LCKL--------GQMKNADMLLDAMLNIGVVPDDITYN 559



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 145/308 (47%), Gaps = 15/308 (4%)

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           ++D  +KL   G     Y ++++     ++  FN L+  FCK G ++DA+++ D I    
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L+P+ V++ T +N YC+ GN+     L  +ME     P   TY+ +I  LCK+ K+  A 
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            L ++M   G+ P+ + + T+I    +  ++    +   +M    L+P    YN L++G 
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C NGDL  A  ++  +    +   K+ YTT+I   C  GDV  A+    +M + G E+  
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450

Query: 589 RDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             ++     M               ML  G  PD     +M+ AF + GD  + F+L   
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510

Query: 634 MIKSGLLP 641
           M   G +P
Sbjct: 511 MQSDGHVP 518


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 239/489 (48%), Gaps = 33/489 (6%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P + S   ++S   K+        L+  M   G+ PD  + NIL++ LC    + E L  
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              + R G  PD +TY+ L KG  +  +IS A  +  ++   G  P+ +TY  L+ G C+
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 216 IGNVEEGLKLREVMLSQG------FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
            GN+   LKL + ML+        FK  VI+YS+++ ++CK  R DEA  L  EM+  G+
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 270 ---------------------------KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
                                      +P++VT+++LI  LCK+ KV +A  L   M  +
Sbjct: 274 TPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQR 333

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I PN   + +++ G C    +  AR  F S+    C  DV+ Y ++I+GY K   + EA
Sbjct: 334 GIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEA 393

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++LY  +++    P + T+ +L+ G  + GKV DA++L   +K++G+      Y  F+N 
Sbjct: 394 MKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNG 453

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+ G +   + L  ++++  I      +  +I GLCK  KL+ A +L E +    + PD
Sbjct: 454 LCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPD 513

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TYN +I  FC+   + KA  L  +M  +   P   TY  LI G   +  L+    LL 
Sbjct: 514 VVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLH 573

Query: 543 SLQEHNISL 551
            + + ++SL
Sbjct: 574 MMVQRDVSL 582



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 157/536 (29%), Positives = 244/536 (45%), Gaps = 36/536 (6%)

Query: 109 CKLG--FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
           CK G   A  A   F LM+     P   S+  L+ GL       +     N M   G+ P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           D  T +IL      ++++     V+  +L +G  PDIVTYT LI G C    + +   L 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM------EAVGLKPDLVTYSILI 280
             M   G   N I Y  L+  +C++G I  AL L  EM        +  KP +++YSI+I
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
             LCK  +  +A  L+ EM  + ++P   ++ ++        M  EA+  F+ ++     
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSL--------MWEEAKRLFNEMVNQGVQ 301

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            +VV +N++ID   K G + EA  L   +I++ I P+++T+NSLI GFC  G +  AR L
Sbjct: 302 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 361

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
             ++   G EP  + YT  +N YC+   ++  + L   M      P   TY  ++ GL +
Sbjct: 362 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 421

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             K+ +A +L   M V G+  D   Y   +   CK   L +A +L N++  +N++     
Sbjct: 422 GGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIEC 481

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           +N LIDGLC  G L+ A  L   L +  +    V Y  +I   C  G V KA   F Q +
Sbjct: 482 FNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILF-QKM 540

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           EK                   NG  PD+     ++  F +   L  V EL  +M++
Sbjct: 541 EK-------------------NGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 577



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 236/480 (49%), Gaps = 33/480 (6%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           S L  ++H   ++ LY+ +++S    +  T +I+++ LC  +R+ + +  +     + + 
Sbjct: 104 SGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYI 163

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL-- 153
           P +V+   ++   C       A  LF  M K G  P+A +Y  L+ GLC  G++  AL  
Sbjct: 164 PDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKL 223

Query: 154 --EFTNDMGRHGV--EPDAITYSILAKGF-----------------------HLLSQISG 186
             E  ND   +G+  +P  I+YSI+                            ++S  S 
Sbjct: 224 HQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSL 283

Query: 187 AW----KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            W    ++  +++ +G  P++VT+ VLI   C+ G V E   L EVM+ +G   N++ Y+
Sbjct: 284 MWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN 343

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+   C  G ++ A  L   M + G +PD++ Y++LI G CK  KV +A++LYN M   
Sbjct: 344 SLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV 403

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P+   +GA+L GL +   + +A+  F  + +     D+ +Y I ++G  K G + EA
Sbjct: 404 GKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEA 463

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++L+ +L    I   I  FN LI G CK GK+  A  L + +    L+P  VTY   ++ 
Sbjct: 464 MELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHE 523

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +C  G + +   L Q+ME     P  +TY  +I+G  +  KL++ V+LL  M    V+ D
Sbjct: 524 FCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 583



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 235/508 (46%), Gaps = 36/508 (7%)

Query: 144 CIAGSME--EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
           C  G++   +A +F + M      P   +++ L  G   +   S  + +  ++ + G  P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D  T  +L+   C +  V EGL +   +L +G+  +++ Y+ L+  +C   RI +A  L 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK------RISPNSFAHGAIL 315
             M+ +G  P+ +TY  L++GLC+   +  A++L+ EM +          P   ++  I+
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
             LC+     EAR  F+ + +      V+ Y  ++          EA +L+ +++ + + 
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQ 301

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P++VTFN LI   CK GKV +A+ LL+ +   G+ P+ +TY + +  +C  G++     L
Sbjct: 302 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 361

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
              M +K   P  + YTV+I G CK  K++EA++L   M  +G  PD  TY  ++    +
Sbjct: 362 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 421

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              +  A +L   M ++ +      Y I ++GLC NG L  A  L   L+ +NI L    
Sbjct: 422 GGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIEC 481

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
           +  +I   C  G +  A   F ++ ++  +                    PD     +M+
Sbjct: 482 FNCLIDGLCKAGKLETAWELFEKLPQEELQ--------------------PDVVTYNIMI 521

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPDK 643
             F +GG +     L   M K+G  PDK
Sbjct: 522 HEFCRGGQVVKANILFQKMEKNGCTPDK 549



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 177/378 (46%), Gaps = 33/378 (8%)

Query: 291 KAIQLYNEMCSKRISP--NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           +A Q ++ M     +P  +SF H  +L GL + +  ++    ++ + +S    D    NI
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTH--LLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNI 136

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +++    +  +GE + +   ++ +   P IVT+ +LI G C   +++ A  L   ++  G
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG 196

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA------IGPTHVTYTVVIKGLCKQW 462
             P+A+TY T M   C  GNI   L L QEM   +        P  ++Y+++I  LCK  
Sbjct: 197 CTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDR 256

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           +  EA  L E+M V G+TP  I+Y +++          +A +L N+M    ++P   T+N
Sbjct: 257 REDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFN 308

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           +LID LC  G +  A  LL  + +  I    + Y ++I+  C  GD++ A   F  M  K
Sbjct: 309 VLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSK 368

Query: 583 GFE-------ISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           G E       + I  Y K+         +  ML  G  PD +    +L    QGG +G  
Sbjct: 369 GCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDA 428

Query: 628 FELAAVMIKSGLLPDKFL 645
            +L  VM   G+  D ++
Sbjct: 429 KKLFGVMKVYGIPGDLYI 446


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 223/445 (50%), Gaps = 2/445 (0%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T SI+I+GL +   L  A    QET        + +   I+    K    + A  L   +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G  P   +YN L++GLC  G +EEA++    +  +G  PD +TY+ L  G     + 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A+K+ +++  +G   D V YT LI G  Q G + +   + + M SQG   +V+  S +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +CK+GRI  A+ +   MEA GL P+ V YS LI GLCK  K+  A+++  +M     
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +P++  +  ++ GLC+   +  AR +FD ++ + C  DV  YNI+I G+ K GN   A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           ++  +   R SP++VT+ +LI G CK  ++  A      +K  G  P +  Y++ ++  C
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G ++    L  EME   +  +  T T +I  LCK  ++ EAV L   +   G+ P   
Sbjct: 361 KSGKLEGGCMLFDEMERSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPY 418

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQM 509
            YN+II +  K   + +   +  +M
Sbjct: 419 AYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 210/415 (50%), Gaps = 1/415 (0%)

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           T+SIL  G      +  A  + Q+    G   DI TYT ++    +   ++E + L E +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
            + G    +  Y+ LL+ +CK GR++EA+ LL ++   G  PD+VTY+ LI GL K+ + 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A +L+ EM S+ ++ ++  + A++ GL +   I +A   + ++    C+ DVV  + M
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           IDG  K G IG AV++++ +  + ++P+ V +++LI+G CK  K+  A  +L  +K    
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P  +TY   ++  C+ G++    A   EM      P   TY ++I G CK      A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           + +DM     +P+ +TY T+I   CK + L KA      M      P S  Y+ L+DGLC
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            +G L+   C+L    E +        T +I   C    V +A++ F  + ++G 
Sbjct: 361 KSGKLEGG-CMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 414



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 204/413 (49%), Gaps = 2/413 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +++T + ++D L +  ++Q+A+  +++       P++ + NA+++  CK+G  E A  L 
Sbjct: 33  DIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 92

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ++  G  PD  +Y  LI GL       EA +   +M   G+  D + Y+ L +G    
Sbjct: 93  RKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQA 152

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  V + +  +G  PD+VT + +I G C+ G +   +++ + M ++G   N + Y
Sbjct: 153 GKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVY 212

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S L+  +CK+ ++D AL +L +M+     PD +TY+ILI GLCK   V  A   ++EM  
Sbjct: 213 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLE 272

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               P+ + +  ++ G C+      A   FD +  S C  +VV Y  +I G  K   + +
Sbjct: 273 AGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTK 332

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A   Y+ + E+   P    ++SL+ G CK+GK+     L D ++  G+  S  T T  + 
Sbjct: 333 ASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQ-TRTRLIF 391

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
             C+   +   ++L   +  + + P    Y  +I  L K  K+ E   + ++M
Sbjct: 392 HLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 207/435 (47%), Gaps = 5/435 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           + GM+  A  +  +       + I TY +++  L     + +   L + I  +     + 
Sbjct: 11  KAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIA 70

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +++GLC+  RL++AI  L++       P VV+  +++    K   +  A  LF  M
Sbjct: 71  TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEM 130

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              GL  D   Y  LI GL  AG + +A      M   G  PD +T S +  G     +I
Sbjct: 131 ASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 190

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++ + +  +G  P+ V Y+ LI G C+   ++  L++   M       + I Y++L
Sbjct: 191 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 250

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +CKSG +  A     EM   G KPD+ TY+ILI G CK      A  ++++M S R 
Sbjct: 251 IDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC 310

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SPN   +G ++ GLC++  +T+A +Y+  +    C  D  +Y+ ++DG  K G +     
Sbjct: 311 SPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCM 370

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+ ++    ++ S  T   LI+  CK  +V +A  L + I+  G+ P    Y + ++A  
Sbjct: 371 LFDEMERSGVANS-QTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALI 428

Query: 425 EEGNIQRLLALLQEM 439
           + G +    A+ QEM
Sbjct: 429 KSGKVNEGQAVYQEM 443



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 2/283 (0%)

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           GL +  M+ +A         + C  D+  Y  ++D   K   I EAV L  ++     +P
Sbjct: 8   GLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTP 67

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           +I T+N+L+ G CK G++ +A  LL  I  +G  P  VTYT+ ++   ++        L 
Sbjct: 68  TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLF 127

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           +EM ++ +    V YT +I+GL +  K+ +A  + + M   G  PD +T +T+I   CK 
Sbjct: 128 KEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 187

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
             +  A ++   M    L P    Y+ LI GLC    +  A  +L  +++   +   + Y
Sbjct: 188 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 247

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT--KSFFC 597
             +I   C  GDV  A  FF +M+E G +  +  Y    S FC
Sbjct: 248 NILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFC 290



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 137/302 (45%), Gaps = 20/302 (6%)

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           ++I+I+G VK G + +A  L ++      +  I T+ +++    KN K+ +A  L++ I 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
            +G  P+  TY   +N  C+ G ++  + LL+++      P  VTYT +I GL K+ +  
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA +L ++M   G+  D + Y  +IR   +   + +A  +   M      P   T + +I
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           DGLC  G +  A  +  S++   ++  +V Y+ +I   C    +  A+    QM      
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM------ 235

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                  K  FC        PD     +++    + GD+ +       M+++G  PD + 
Sbjct: 236 -------KKAFCT-------PDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYT 281

Query: 646 IN 647
            N
Sbjct: 282 YN 283



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 15/211 (7%)

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           T++++I GL K   L +A  L ++    G T D  TY TI+    K K +++A  L+ ++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
             +   PT ATYN L++GLC  G L+ A  LL  + ++  +   V YT++I     +   
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 570 HKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVM 614
            +A   F +M  +G  +    YT                S +  M S G  PD      M
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           +    + G +G+   +   M   GL P++ +
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVV 211


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 151/631 (23%), Positives = 280/631 (44%), Gaps = 90/631 (14%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           ++ W +  +IK      +    +++I    +   ++ A+   +     +  P V + N +
Sbjct: 108 ELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTV 167

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +    +     +A G++  MLK    P+  +++ILI G+C +G  + AL+  ++M +  +
Sbjct: 168 LHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRI 227

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            P+ ITY+I+  G     +   A+++   +   G  PD VTY  L+ G+C++G V+E L 
Sbjct: 228 LPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALG 287

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L +      + L+   YS L+  + ++ R ++A     +M    +KPD++ Y+I+++GL 
Sbjct: 288 LLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLS 347

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K  K   A++L NEM  + + P++  + A++ G C+  ++ EA+     +  ++C     
Sbjct: 348 KAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSAC 407

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR------ 398
            Y I+I G  + G +G+A Q++ ++ +    PS+VTFN+LI GFCK G +  A+      
Sbjct: 408 TYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM 467

Query: 399 -----------------RLLDTIKLH-------------------------GLEPSAVTY 416
                            R+LDT  L                          G  P+ +TY
Sbjct: 468 EIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITY 527

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              ++ +C+ GNI     L +E++ K + P  VTY  +I GL    + ++A  +L+ +  
Sbjct: 528 NILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILK 587

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS------------------ 518
            G TP    Y + +   C+   +  AF L    WL  L                      
Sbjct: 588 NGCTPITEVYKSFMTWSCRRNKITLAFSL----WLKYLRSIPGRDSEVLKSVEENFEKGE 643

Query: 519 --------------------ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
                               A Y I + GLC  G L+ A  +  +L+EHN+ +T  +   
Sbjct: 644 VEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVK 703

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
           +I      G++  A   F   ++KG+ +  R
Sbjct: 704 LIYRLLKVGNLDLAAEIFLYTIDKGYMLMPR 734



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/467 (22%), Positives = 211/467 (45%), Gaps = 63/467 (13%)

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           +++++++  + K    +    +L E++  G       +++LI+   K D + KA++ +  
Sbjct: 92  VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M      P+ F +  +L  +  KE++  A   ++ ++  NC+ ++  ++I+IDG  K G 
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
              A+Q++ ++ ++RI P+ +T+  +I G C+  K   A RL   +K HG  P +VTY  
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271

Query: 419 FMNAYCEEGNIQRLLALL-----------------------------------QEMETKA 443
            ++ +C+ G +   L LL                                   ++M    
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           I P  + YT+++KGL K  K ++A++LL +M   G+ PD   YN +I+ +C    L +A 
Sbjct: 332 IKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAK 391

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            L  ++  ++   ++ TY ILI G+C +G + +A  +   +++H    + V +  +I   
Sbjct: 392 SLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGF 451

Query: 564 CAEGDVHKAMTFFCQM----------------------------VEKGFEISIRDYTKSF 595
           C  G++ KA   F +M                            VE+  +  +     + 
Sbjct: 452 CKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNI 511

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              +  +GF P+     +++  F + G++   F+L   +   GL PD
Sbjct: 512 LMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPD 558



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 124/308 (40%), Gaps = 20/308 (6%)

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           ++  V +N++ID  +K        Q+ +++     S S   F  LI  + K   +  A  
Sbjct: 88  LRSWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVE 147

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
             + +K    +P   TY T ++    +  +   L +   M      P   T++++I G+C
Sbjct: 148 SFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMC 207

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K  K Q A+Q+ ++M    + P++ITY  II   C+ +    A++L   M  H   P S 
Sbjct: 208 KSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSV 267

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYN L+ G C  G +  A  LL   ++    L K  Y+ +I           A  ++ +M
Sbjct: 268 TYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKM 327

Query: 580 VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
            E   +                    PD  +  +M+    + G       L   M + GL
Sbjct: 328 TEHNIK--------------------PDVILYTIMMKGLSKAGKFKDALRLLNEMTERGL 367

Query: 640 LPDKFLIN 647
           +PD    N
Sbjct: 368 VPDTHCYN 375


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 250/497 (50%), Gaps = 36/497 (7%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +++   +  RL++A+  + E   +   P+  +LN I+    ++G  E A+ LF  M   G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + PD+ SY +++   C  G++ EA ++ + M   G   D  T++++   F      + A 
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
              ++L+  G +P+++ +T +I G C+ G++++  ++ E M+ +G+K NV  ++ L+  +
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 249 CKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           CK G  ++A  L  ++  +   KP+++TY+ +I G C++DK+++A  L + M  + + PN
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           +                                     Y  +IDG+ K GN   A  L  
Sbjct: 381 TNT-----------------------------------YTTLIDGHCKAGNFERAYDLMN 405

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            +  +  SP++ T+N+++ G CK G+V +A ++L+    +GL+P   TY   M+ +C++ 
Sbjct: 406 LMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQE 465

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           NI++ LAL  +M    I P   +YT +I   C++ +++E+    E+   IG+ P   TY 
Sbjct: 466 NIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYT 525

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           ++I  +C+  +L  A +  +++  H   P S TY  +I GLC       A  L  S+ E 
Sbjct: 526 SMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEK 585

Query: 548 NISLTKVAYTTIIKAHC 564
            +   +V   T+   +C
Sbjct: 586 GLVPCEVTRITLAYEYC 602



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 238/495 (48%), Gaps = 55/495 (11%)

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           ++      G ++EA+E   +M   G+ P+  T + + K    +  +  A  + +++ ++G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD ++Y V++  YC+IGN+ E  K   VML +GF ++   +++++S     G    AL
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
                +  +GL+P+L+ ++ +I G                                   L
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEG-----------------------------------L 285

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE-KRISPS 377
           C++  I +A    + ++      +V  +  +IDG  K G   +A +L+ +L+  +   P+
Sbjct: 286 CKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPN 345

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           ++T+ ++I G+C+  K+  A  LL  +K  GL P+  TYTT ++ +C+ GN +R   L+ 
Sbjct: 346 VLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMN 405

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            M ++   P   TY  ++ GLCK+ ++QEA ++LED +  G+ PD+ TYN ++   CK +
Sbjct: 406 LMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQE 465

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
           ++R+A  L N+M    ++P   +Y  LI   C    +K ++          I  T   YT
Sbjct: 466 NIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYT 525

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG---------------FEISIRDYTKSFFCMMLSN 602
           ++I  +C EG++  AM FF ++ + G                + S RD  +S +  M+  
Sbjct: 526 SMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEK 585

Query: 603 GFPPDQEICEVMLIA 617
           G  P    CEV  I 
Sbjct: 586 GLVP----CEVTRIT 596



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 219/435 (50%), Gaps = 1/435 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T + +I    +   ++ A L  +E   +   P  +S   ++  YCK+G    A    
Sbjct: 169 NTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWL 228

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +ML+ G   D  ++ ++I      G    AL +   +   G+EP+ I ++ + +G    
Sbjct: 229 SVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKR 288

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQGFKLNVIA 240
             I  A++++++++ KG  P++ T+T LI G C+ G  E+  +L  +++ S+  K NV+ 
Sbjct: 289 GSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLT 348

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ ++S  C+  +++ A  LL  M+  GL P+  TY+ LI G CK     +A  L N M 
Sbjct: 349 YTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMS 408

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           S+  SPN   + AI+ GLC++  + EA    +    +    D   YNI++  + K  NI 
Sbjct: 409 SEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIR 468

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A+ L+ ++++  I P I ++ +LI  FC+  ++ ++    +     G+ P+  TYT+ +
Sbjct: 469 QALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMI 528

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             YC EGN+   +     +      P  +TY  +I GLCKQ K  EA  L + M   G+ 
Sbjct: 529 CGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLV 588

Query: 481 PDQITYNTIIRSFCK 495
           P ++T  T+   +CK
Sbjct: 589 PCEVTRITLAYEYCK 603



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 219/459 (47%), Gaps = 39/459 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           +S  G + +AV ++ +M    L  + +T N ++       ++     L++++ V     +
Sbjct: 145 FSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPD 204

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +  +++   C+   + +A  +L     + F     +   I+SR+   G+   A   F 
Sbjct: 205 SISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFR 264

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL-------- 174
            ++  GL P+  ++  +I GLC  GS+++A E   +M   G +P+  T++ L        
Sbjct: 265 RLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKG 324

Query: 175 --AKGFHLL-----------------SQISG---------AWKVIQKLLIKGSDPDIVTY 206
              K F L                  + ISG         A  ++ ++  +G  P+  TY
Sbjct: 325 WTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTY 384

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T LI G+C+ GN E    L  +M S+GF  N+  Y+ +++ +CK GR+ EA  +L +   
Sbjct: 385 TTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQ 444

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            GLKPD  TY+IL+   CKQ+ + +A+ L+N+M    I P+  ++  ++   C +  + E
Sbjct: 445 NGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKE 504

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           + M+F+  +    I     Y  MI GY + GN+  A++ + +L +   +P  +T+ ++I 
Sbjct: 505 SEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIIS 564

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           G CK  K  +AR L D++   GL P  VT  T    YC+
Sbjct: 565 GLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 177/404 (43%), Gaps = 64/404 (15%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++ S  + GR+ EA+ ++ EM   GL P+  T + +I+   +   V  A  L+ EMC + 
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P+S +                                   Y +M+  Y K+GNI EA 
Sbjct: 201 VQPDSIS-----------------------------------YRVMVVMYCKIGNILEAD 225

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA----RRLLDTIKLHGLEPSAVTYTTF 419
           +    ++E+       TF  +I  F   G    A    RRL+D     GLEP+ + +T  
Sbjct: 226 KWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDM----GLEPNLINFTCM 281

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL-LEDMYVIG 478
           +   C+ G+I++   +L+EM  K   P   T+T +I GLCK+   ++A +L L+ +    
Sbjct: 282 IEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSEN 341

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
             P+ +TY  +I  +C+   L +A  LL++M    L P + TY  LIDG C  G+ + A 
Sbjct: 342 HKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAY 401

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            L+  +     S     Y  I+   C  G V +A     +M+E GF+             
Sbjct: 402 DLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAY----KMLEDGFQ------------- 444

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              NG  PD+    +++    +  ++     L   M+K G+ PD
Sbjct: 445 ---NGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPD 485


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 158/598 (26%), Positives = 274/598 (45%), Gaps = 20/598 (3%)

Query: 70  IDGLCQQSRLQDAILFLQE-TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           I G C +++     LF     + +    S V  + ++S +      E A  +F      G
Sbjct: 218 IVGFCNEAKYDTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVG 277

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF----HLLSQI 184
           L PD  + N L+  L  A  +E       ++   G  P+  TY+I+   +       + +
Sbjct: 278 LEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGM 337

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  ++ K+   G  P +VTY+  I G C++GNVE  L L   +      LN  +++ +
Sbjct: 338 RQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDV 397

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   CK G + EAL +L EM++ G+ PD+ +YSILI   C +  V K + L  EM   +I
Sbjct: 398 IYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQI 457

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+  ++ +++ GLC+K M+  A   F S+  S+C  D  +Y  +IDG+   G++  A++
Sbjct: 458 KPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIK 517

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L  ++I   + P+  +  SLI G+ K G    A  + + +   G+ P  +     ++  C
Sbjct: 518 LLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSC 577

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             G  +  L LL++ +         +Y  +I  LCK+   + A++LL  M    V P  +
Sbjct: 578 RAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVV 637

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y+T+I  F K  + ++A  L  +M    +    ATY IL+     +  +  A  +   +
Sbjct: 638 NYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEM 697

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------KS--- 594
           +E  + L +++YTT+I   C   ++ KA   F +M  +G   ++  YT       KS   
Sbjct: 698 KERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRI 757

Query: 595 -----FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                 F  M  +   PD     V++  +H+ G      +L  VM   G+LPD    N
Sbjct: 758 DLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHN 815



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/564 (24%), Positives = 266/564 (47%), Gaps = 12/564 (2%)

Query: 25  LDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAIL 84
            D+ +S+   NS+L N        D++ + K      ++ T + ++  L + +R++    
Sbjct: 250 FDVLISVFASNSMLEN------ALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRR 303

Query: 85  FLQETAGKEFGPSVVSLNAIMSRYCK-----LGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
             +E   +   P++ +   +M+ YC       G  + A  +   + + G  P   +Y+  
Sbjct: 304 VFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAV-ILGKIYRSGEKPTVVTYSTY 362

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           IHGLC  G++E AL    ++       ++ +++ +  GF    ++  A +V++++   G 
Sbjct: 363 IHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGI 422

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            PD+ +Y++LI  +C  G+V + L L E M     K ++++Y+ L+  +CK   +  A+ 
Sbjct: 423 LPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVD 482

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           + + + A   K D   Y  LI G C Q  +  AI+L  EM    + P +F+  +++ G  
Sbjct: 483 IFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYY 542

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           +  +  +A   F++++      D +  N ++DG  + G   EA+ L     E   + +  
Sbjct: 543 KLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPH 602

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           ++N++IY  CK G    A  LL  +    + PS V Y+T ++ + ++ N +R + L   M
Sbjct: 603 SYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRM 662

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
               I     TYT+++       K+ EA  + ++M   G+  DQI+Y T+I  FC  +++
Sbjct: 663 VKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREM 722

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
           +KA+ L  +M      P   TY  +IDG C +  +  A  +   +   ++    V YT +
Sbjct: 723 KKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVL 782

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKG 583
           I  +   G   +A   +  M +KG
Sbjct: 783 IDWYHKHGYFDQAHKLYDVMKDKG 806



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 145/567 (25%), Positives = 259/567 (45%), Gaps = 52/567 (9%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
           V++   M+ +A+ V +  K + L+  I+T N LL  L      + +  +++++K      
Sbjct: 256 VFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSP 315

Query: 62  NVYTNSIVIDGLCQQ----SRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           N+YT +I+++  C      + ++ A + L +       P+VV+ +  +   CK+G  E A
Sbjct: 316 NIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAA 375

Query: 118 KGLFCLMLKYGLH----P-DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
                LML   LH    P ++ S+N +I+G C  G + EAL+   +M   G+ PD  +YS
Sbjct: 376 -----LMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYS 430

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
           IL   F     +     +++++      P IV+YT LI G C+   ++  + +   + + 
Sbjct: 431 ILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGAS 490

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
             K +   Y  L+   C  G +D A+ LL EM    L P   +   LIRG  K     +A
Sbjct: 491 SCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQA 550

Query: 293 IQLYNEMCSKRISPNSFA--------------------------HG---------AILLG 317
           ++++N M    I P++ A                          HG         AI+  
Sbjct: 551 LEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYK 610

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC++     A      ++  N +  VV Y+ +I G+ K  N   AV L+ ++++  I+ +
Sbjct: 611 LCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFN 670

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           I T+  L+  F  + K+ +A  +   +K  GL    ++YTT +  +C    +++  AL +
Sbjct: 671 IATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFE 730

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM  +   P  +TYT +I G CK  ++  A  + + M    V PD +TY  +I  + K  
Sbjct: 731 EMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHG 790

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNIL 524
              +A +L + M    + P   T+N+L
Sbjct: 791 YFDQAHKLYDVMKDKGVLPDDITHNVL 817



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 6/155 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVS 57
           +L  ++S +  +H+A  +  +MKE  L +   +Y +L+    N R     W L++++   
Sbjct: 676 ILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSRE 735

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NV T + +IDG C+ +R+  A     +       P VV+   ++  Y K G+ + A
Sbjct: 736 GCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQA 795

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
             L+ +M   G+ PD  ++N+L  GL  AG+++E 
Sbjct: 796 HKLYDVMKDKGVLPDDITHNVL--GL-KAGTVQEG 827


>gi|297808491|ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317966|gb|EFH48388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 252/454 (55%), Gaps = 13/454 (2%)

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKE-FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           +S ++  LC Q ++ DA L+L+E   +  F P ++  N +++  CKLG+ E A GL   M
Sbjct: 122 HSSIMRDLCLQGKM-DAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLVREM 180

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G  P+  SYN LI GLC   ++++AL   + + ++G++P+ +T +I+    H L Q 
Sbjct: 181 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIV---HALCQK 237

Query: 185 ----SGAWKVIQKLLIK---GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
               +   K+++++L      +  DIVT T+L+    + GNV + L++ + M  +    +
Sbjct: 238 GVIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTD 297

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + Y+V++  +C SG +  A G + +M   G+ PD+ TY+ LI  LCK  K   A  L+ 
Sbjct: 298 SVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHG 357

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            M +  ++P+  ++  I+ GLC +  +  A  +  S++  + + +V+L+N++IDGY + G
Sbjct: 358 TMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYG 417

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           +   A+ +   ++   + P++ T N+LI+G+ K G++ DA  + + ++   + P   TY 
Sbjct: 418 DTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYN 477

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             + A C  G+++    L  EM  +   P  +TYT +++GLC + +L+EA  LL  M V 
Sbjct: 478 LLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSRMQVS 537

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           G+T D + +  +++ + + +   +A+ L+ + WL
Sbjct: 538 GITMDHVPFLILVKKYTRLQRPDEAY-LVYKKWL 570



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 198/398 (49%), Gaps = 4/398 (1%)

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
           D  +  ++ ++   C  G ++  L LRE ML  GF   +I ++ LL+ +CK G I++A G
Sbjct: 116 DDSLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADG 175

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           L+ EM  +G  P+ V+Y+ LI+GLC  + V KA+ L++ +    I PN      I+  LC
Sbjct: 176 LVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALC 235

Query: 320 EKEMITEARMYFDSLIMS----NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
           +K +I          I+     N   D+V   I++D   K GN+ +A+++++++ +K + 
Sbjct: 236 QKGVIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVP 295

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
              V +N +I G C +G +  A   +  +   G+ P   TY T ++A C+ G       L
Sbjct: 296 TDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDL 355

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
              M+   + P  ++Y V+I+GLC Q  +  A + L+ M    + P+ + +N +I  + +
Sbjct: 356 HGTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGR 415

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
             D   A  +LN M  + ++P   T N LI G    G L +A  +   ++   I      
Sbjct: 416 YGDTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTT 475

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           Y  ++ A C  G +  A   + +M+++G +  I  YT+
Sbjct: 476 YNLLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTE 513



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 182/370 (49%), Gaps = 9/370 (2%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL--------RHTDIMWDLYDDIKVSETPRNV 63
           V  A+++ + + +  +K +  T N +++ L         +T ++ ++ D  +V+  P ++
Sbjct: 205 VDKALYLFSTLNKYGIKPNRVTCNIIVHALCQKGVIGNNNTKLLEEILDSSQVN-APLDI 263

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T +I++D   +   +  A+   +E + K      V  N I+   C  G    A G  C 
Sbjct: 264 VTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCD 323

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+K G++PD F+YN LI  LC AG  + A +    M   GV PD I+Y ++ +G  +   
Sbjct: 324 MVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGD 383

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A + +Q +L +   P+++ + V+I GY + G+    L +  +MLS G K NV   + 
Sbjct: 384 VDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNA 443

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+    K GR+ +A  +  EM +  + PD  TY++L+   C    +  A QLY+EM  + 
Sbjct: 444 LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRG 503

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+   +  ++ GLC K  + EA      + +S    D V + I++  Y +L    EA 
Sbjct: 504 CQPDIITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLILVKKYTRLQRPDEAY 563

Query: 364 QLYRQLIEKR 373
            +Y++ +  R
Sbjct: 564 LVYKKWLVTR 573



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 191/427 (44%), Gaps = 25/427 (5%)

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            NV+ Y +L SS+ +   + E++      E       L  +S ++R LC Q K+  A+ L
Sbjct: 86  FNVLDY-ILKSSLDRLASLRESVCQTKNFE---YDDSLSIHSSIMRDLCLQGKMDAALWL 141

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
             +M      P    H  +L GLC+   I +A      +       + V YN +I G   
Sbjct: 142 REKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCS 201

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR-RLLDTIKLHGLEPSA- 413
           + N+ +A+ L+  L +  I P+ VT N +++  C+ G + +   +LL+ I L   + +A 
Sbjct: 202 VNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQKGVIGNNNTKLLEEI-LDSSQVNAP 260

Query: 414 ---VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
              VT T  M++  + GN+ + L + +EM  K +    V Y V+I+GLC    +  A   
Sbjct: 261 LDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGF 320

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           + DM   GV PD  TYNT+I + CK      A  L   M    + P   +Y ++I GLC+
Sbjct: 321 MCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCI 380

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS--- 587
            GD+  A+  L S+ + ++    + +  +I  +   GD   A++    M+  G + +   
Sbjct: 381 QGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYT 440

Query: 588 ----IRDYTKSFFCM--------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
               I  Y K    +        M S    PD     +++ A    G L   F+L   M+
Sbjct: 441 NNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEML 500

Query: 636 KSGLLPD 642
           K G  PD
Sbjct: 501 KRGCQPD 507



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 127/290 (43%), Gaps = 19/290 (6%)

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           S+   +S++   C  GK+  A  L + +   G  P  + +   +N  C+ G I++   L+
Sbjct: 118 SLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLV 177

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           +EM      P  V+Y  +IKGLC    + +A+ L   +   G+ P+++T N I+ + C+ 
Sbjct: 178 REMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQK 237

Query: 497 KDLRKAFQLLNQMWLHNLEPTSA----TYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
             +      L +  L + +  +     T  IL+D    NG++  A  +   + + N+   
Sbjct: 238 GVIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTD 297

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC------------- 597
            V Y  II+  C+ G++  A  F C MV++G    +  Y    S  C             
Sbjct: 298 SVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHG 357

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            M + G  PDQ   +V++      GD+    E    M+K  LLP+  L N
Sbjct: 358 TMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWN 407


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 247/498 (49%), Gaps = 16/498 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V + N I+    +  F  +A  ++  M+K    P+  +++ILI GLC +G++++AL  
Sbjct: 159 PDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHL 218

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            ++M + G+ PDA TY ++  G     ++  A+++  K+   G  PD VT   L+ G+C 
Sbjct: 219 FDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCM 278

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +  V+E   L  +    G+ L+V  YS L+  + ++ R ++   L  +M    +KPD+  
Sbjct: 279 LDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYL 338

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+I+++GL +  KV  A++L NEM    + P++  +  ++ G C+  +++EAR     + 
Sbjct: 339 YTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEIS 398

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
             +C  +V  Y+I+I G  + G   +A +++ ++ +    PS VTFNSLI G CK G++ 
Sbjct: 399 RHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLE 458

Query: 396 DARRLLDTIKLHGLEPS--------------AVTYTTFMNAYCEEGNIQRLLALLQEMET 441
            A  L   +++ G  PS              + +    +   C+ G I +   +L ++  
Sbjct: 459 KAHLLFYKMEI-GRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLAD 517

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
               P   TY +++ G CK      A +L  +M   G++PD +TY T+I    + +    
Sbjct: 518 SGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREED 577

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A+++ +QM  +   P +A Y  ++  +C   +L  A  L +     NI   +      I+
Sbjct: 578 AYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYL-RNIRSQEDEAIKAIE 636

Query: 562 AHCAEGDVHKAMTFFCQM 579
            +  + +V KA+    +M
Sbjct: 637 GYFEKQEVEKAVRGLLEM 654



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 149/601 (24%), Positives = 265/601 (44%), Gaps = 17/601 (2%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPR 61
           VY + G+   A+     M++ D    + TYN +L  L   + +     +Y  +       
Sbjct: 135 VYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLP 194

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T SI+IDGLC+   ++DA+    E   +   P   +   ++S  C+    + A  LF
Sbjct: 195 NVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLF 254

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G+ PD  + N L++G C+   ++EA        + G   D   YS L +G    
Sbjct: 255 DKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRA 314

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +      + +K++     PD+  YT+++ G  + G V + L+L   M   G   + + Y
Sbjct: 315 KRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCY 374

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+   C  G + EA  L  E+      P++ TYSILI G+C+      A +++NEM  
Sbjct: 375 NVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEK 434

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYF--------DSLIM-----SNCIQDVVLYNI 348
               P++    +++ GLC+   + +A + F         SL +      + + D      
Sbjct: 435 LGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQK 494

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           M++     G I +A ++  QL +   +P I T+N L+ GFCK G    A +L   ++  G
Sbjct: 495 MVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKG 554

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L P  VTY T +N        +    +  +ME     P    Y  ++  +C++ +L  A 
Sbjct: 555 LSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAF 614

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            L    Y+  +   +      I  + + +++ KA + L +M     +     Y I + GL
Sbjct: 615 SLWLK-YLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGL 673

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C    +  A  + + L+E+ + +T      +I     EGD+ +A+  F   +EKG+ +  
Sbjct: 674 CQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKGYLLRR 733

Query: 589 R 589
           R
Sbjct: 734 R 734



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 220/474 (46%), Gaps = 27/474 (5%)

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS-----ILAKGFHLLSQ 183
           +H DAF   +LI      G  ++A+E    M      PD  TY+     ++ K F LL  
Sbjct: 124 VHNDAFF--VLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLL-- 179

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A  V  +++     P++ T+++LI G C+ GNV++ L L + M  +G   +   Y V
Sbjct: 180 ---ALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCV 236

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++S +C+S R+D+A  L  +M+  G+ PD VT + L+ G C  D+V +A  L        
Sbjct: 237 VISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDG 296

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
              +   +  ++ GL   +   + ++ +  +I  N   DV LY IM+ G  + G + +A+
Sbjct: 297 YVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDAL 356

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L  ++ E  + P  V +N LI GFC  G +++AR L   I  H   P+  TY+  ++  
Sbjct: 357 ELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGM 416

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP-- 481
           C  G  +    +  EME     P+ VT+  +I GLCK  +L++A  L   M  IG  P  
Sbjct: 417 CRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKME-IGRNPSL 475

Query: 482 ------------DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
                       D  +   ++   C    + KA+++L Q+      P   TYNIL++G C
Sbjct: 476 FLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFC 535

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             G+   A  L   +Q   +S   V Y T+I           A   F QM + G
Sbjct: 536 KLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNG 589



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 172/353 (48%)

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           E + + G K++  A+ VL+    K G  D+A+     M      PD+ TY++++  L ++
Sbjct: 115 EALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQK 174

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
           + +  A+ +Y  M      PN      ++ GLC+   + +A   FD +     + D   Y
Sbjct: 175 NFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTY 234

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
            ++I G  +   + +A +L+ ++ +  + P  VT N+L+ GFC   +V +A  LL   + 
Sbjct: 235 CVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEK 294

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G       Y+  +         + +  L ++M    + P    YT+++KGL +  K+++
Sbjct: 295 DGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRD 354

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A++LL +M   GV PD + YN +I+ FC    L +A  L  ++  H+  P   TY+ILI 
Sbjct: 355 ALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILIS 414

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           G+C NG  ++A  +   +++     + V + ++I   C  G + KA   F +M
Sbjct: 415 GMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKM 467



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 117/290 (40%), Gaps = 24/290 (8%)

Query: 362 AVQLYRQLIEKRISPSIVTFNS----LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            ++LY Q +E   +  I   N     LI  + K G    A     +++     P   TY 
Sbjct: 106 GLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYN 165

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++   ++  +   L +   M      P   T++++I GLCK   +++A+ L ++M   
Sbjct: 166 MILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQR 225

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD  TY  +I   C+ K +  A++L ++M    + P   T N L++G C+   +  A
Sbjct: 226 GILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEA 285

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             LL   ++    L    Y+ +I+              + +M+E                
Sbjct: 286 FSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIE---------------- 329

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               +   PD  +  +M+    + G +    EL   M +SG++PD    N
Sbjct: 330 ----DNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYN 375


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 251/536 (46%), Gaps = 18/536 (3%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           Y+  IV+ GLC   ++++    + +  G    P+VV  N I+  YCK G  + A  +F  
Sbjct: 206 YSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEE 265

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +   G  P   +Y  LI G C AG  +   +  N+M   G+  +   ++ +    +    
Sbjct: 266 LKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGL 325

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A ++++ +   G +PDI TY +LI   C  G ++E  +  E    +    N  +Y+ 
Sbjct: 326 VDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTP 385

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+ + CK G    A  +L+++   G KPDLV+Y   I G     ++  A+ +  +M  K 
Sbjct: 386 LMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKG 445

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P++  +  ++ GLC+K     A++    ++  N   D  +Y  ++DG+++   + +A 
Sbjct: 446 VFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKAT 505

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L+  ++ K I P +V +N +I G CK GK+ DA   ++ +K+    P   T++T ++ Y
Sbjct: 506 ELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGY 565

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            ++ ++   L +  +M  +   P  V YT +I G CK   +  A ++   M    + P+ 
Sbjct: 566 VKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNV 625

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TY  +I  F K     KA      M ++N  P   T++ LI+GL    ++ N   L+  
Sbjct: 626 VTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLT---NITNTTLLIEK 682

Query: 544 LQEHNISL---------------TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            +E++ SL                   Y +II   C  G V  A     +M+ KGF
Sbjct: 683 NEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGF 738



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 144/614 (23%), Positives = 266/614 (43%), Gaps = 34/614 (5%)

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           +P N    S ++  + +     +  + L++   + F P++ +LN+++  Y + GF + A 
Sbjct: 89  SPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAV 148

Query: 119 GLFCLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM----GRHGVEPDAITYSI 173
            +F ++ + Y   P   + N L++ L   G ++ A E  + M    G HG++     YSI
Sbjct: 149 KMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSI 208

Query: 174 L--AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           +   KG   + ++    K+I      G  P++V Y V+I GYC+ G+++   ++ E +  
Sbjct: 209 VIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKL 268

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +GF   +  Y  L+   CK+G+      LL EM  +GL  ++  ++ +I    K   V K
Sbjct: 269 KGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDK 328

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A ++   M      P+   +  ++   C    I EA  + +       + +   Y  ++ 
Sbjct: 329 AAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMH 388

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
            Y K G+   A  +  ++ E    P +V++ + I+G    G++  A  + + +   G+ P
Sbjct: 389 AYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFP 448

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
            A  Y   M+  C++G       LL EM    + P    Y  ++ G  +  +L +A +L 
Sbjct: 449 DAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELF 508

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
           E +   G+ P  + YN +I+  CKC  +  A   +N+M + N  P   T++ +IDG    
Sbjct: 509 EVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQ 568

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
            DL +A  +   + +       VAYT++I   C   D+ +A   F  M     E ++  Y
Sbjct: 569 HDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTY 628

Query: 592 T---------------KSFFCMMLSNGFPPDQEICE------------VMLIAFHQGGDL 624
           T                SFF +ML N   P+                  +LI  ++  D 
Sbjct: 629 TILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDR 688

Query: 625 GSVFELAAVMIKSG 638
             + +  A MI  G
Sbjct: 689 SLILDFFATMISEG 702



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/544 (23%), Positives = 244/544 (44%), Gaps = 47/544 (8%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           +++++K+      + T   +IDG C+  + Q     L E        +V   N+I+    
Sbjct: 262 VFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKY 321

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           K G  + A  +  +M + G  PD  +YNILI+  C  G ++EA EF        + P+  
Sbjct: 322 KYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKF 381

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+ L   +        A  ++ K+   G  PD+V+Y   I G    G ++  L +RE M
Sbjct: 382 SYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKM 441

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           + +G   +   Y+VL+S +CK GR   A  LL EM  + L+PD   Y+ L+ G  + +++
Sbjct: 442 MEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNEL 501

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            KA +L+  + SK I P    +  ++ GLC+   +T+A  Y + + ++N   D   ++ +
Sbjct: 502 DKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTV 561

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           IDGYVK  ++  A++++ Q+++++  P++V + SLI GFCK   ++ A ++   ++   L
Sbjct: 562 IDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNL 621

Query: 410 EPSAVTYTTFMNAYCEEGNIQR-------------------------------------- 431
           EP+ VTYT  +  + + G  ++                                      
Sbjct: 622 EPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIE 681

Query: 432 ---------LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
                    +L     M ++       TY  +I  LCK   +  A  L   M   G   D
Sbjct: 682 KNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMD 741

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            + ++ ++   C+    ++   +++         T+  Y++ +D    +G    A  +L+
Sbjct: 742 SVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKPSEASYILL 801

Query: 543 SLQE 546
           +L E
Sbjct: 802 NLIE 805



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/510 (23%), Positives = 223/510 (43%), Gaps = 54/510 (10%)

Query: 18  VIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           ++ +M  + L V+++ +NS++   Y     D   ++   +       ++ T +I+I+  C
Sbjct: 297 LLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSC 356

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
              R+++A  FL+    +   P+  S   +M  YCK G   +A  +   + + G  PD  
Sbjct: 357 SGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLV 416

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           SY   IHG    G ++ AL     M   GV PDA  Y++L  G     +   A  ++ ++
Sbjct: 417 SYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEM 476

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           L     PD   Y  L+ G+ +   +++  +L EV++S+G    V+ Y+V++  +CK G++
Sbjct: 477 LDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKM 536

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            +A+  + +M+     PD  T+S +I G  KQ  +  A++++ +M  ++  PN  A+ ++
Sbjct: 537 TDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSL 596

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ------ 368
           + G C+   ++ A   F ++   N   +VV Y I+I G+ K G   +A   +        
Sbjct: 597 INGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNC 656

Query: 369 ----------------------LIEKR-------------------ISPSIVTFNSLIYG 387
                                 LIEK                     S  I T+NS+I  
Sbjct: 657 LPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVC 716

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK+G V  A+ L   +   G    +V ++  ++  C+ G  +    ++    TK    T
Sbjct: 717 LCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQT 776

Query: 448 HVTYTVVIKGLCKQWKLQEA----VQLLED 473
              Y++ +       K  EA    + L+ED
Sbjct: 777 AFEYSLKLDKYLYDGKPSEASYILLNLIED 806



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 190/434 (43%), Gaps = 61/434 (14%)

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           LN +AYS LL  M K     E   +L +M+    KP L   + +I    +   V KA+++
Sbjct: 91  LNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKM 150

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +  +C                                   + NC   VV  N +++  VK
Sbjct: 151 FYMVCE----------------------------------LYNCFPCVVANNSLLNCLVK 176

Query: 356 LGNIGEAVQLYRQLIEKR---------ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
            G +  A +LY +++E+           + SIV    ++ G C  GKV + R+L+D    
Sbjct: 177 NGKVDVACELYDKMLERGGDHGLDLVVDNYSIVI---VVKGLCDVGKVEEGRKLIDDRWG 233

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
           +G  P+ V Y   ++ YC++G+++R   + +E++ K   PT  TY  +I G CK  K Q 
Sbjct: 234 NGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQV 293

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
             QLL +M V+G+  +   +N+II +  K   + KA +++  M     EP   TYNILI+
Sbjct: 294 VDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILIN 353

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
             C  G +K A+  L   +E  +   K +YT ++ A+C +GD   A     ++ E G + 
Sbjct: 354 FSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKP 413

Query: 587 SIRDYTKSFFC---------------MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
            +  Y                      M+  G  PD +I  V++    + G   +   L 
Sbjct: 414 DLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLL 473

Query: 632 AVMIKSGLLPDKFL 645
           + M+   L PD ++
Sbjct: 474 SEMLDLNLQPDAYM 487



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 142/347 (40%), Gaps = 61/347 (17%)

Query: 305 SP-NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           SP N+ A+ ++L  + +  + +E  +  + +   N    +   N +I  Y + G + +AV
Sbjct: 89  SPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAV 148

Query: 364 QLYRQLIE-KRISPSIVTFNSLIYGFCKNGKVADARRLLDTI----KLHGLEPSAVTYTT 418
           +++  + E     P +V  NSL+    KNGKV  A  L D +      HGL+     Y+ 
Sbjct: 149 KMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSI 208

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
                                             +V+KGLC   K++E  +L++D +  G
Sbjct: 209 ---------------------------------VIVVKGLCDVGKVEEGRKLIDDRWGNG 235

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
             P+ + YN II  +CK  DL++A ++  ++ L    PT  TY  LIDG C  G  +  D
Sbjct: 236 CVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVD 295

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            LL  +    +++    + +II A    G V KA      M E G E  I  Y       
Sbjct: 296 QLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYN------ 349

Query: 599 MLSNGFPPDQEICEVMLIAFH-QGGDLGSVFELAAVMIKSGLLPDKF 644
                          +LI F   GG +    E      +  LLP+KF
Sbjct: 350 ---------------ILINFSCSGGRIKEAEEFLERAKERTLLPNKF 381


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 239/489 (48%), Gaps = 11/489 (2%)

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           Y K   AE     F  M++ G  P   + NI++  L  +  M +A E    M  HG+ P 
Sbjct: 214 YTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPT 273

Query: 168 AITY-SILAKGFHL--LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            IT+ ++L   F    L ++   W  +++  I+ S+   VTY +LI G+ + G +EE  +
Sbjct: 274 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSE---VTYNILINGFSKSGKMEEARR 330

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
               M   GF +   +++ L+   CK G  DEA G+  EM   G+ P   TY+I IR LC
Sbjct: 331 FHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALC 390

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           +  ++  A +L + M +    P+  ++  ++ G  +     EA + FD L   N    +V
Sbjct: 391 EFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIV 446

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            YN +IDG  + GN+  A +L  ++  + I P ++T+ +L+ GF KNG ++ A  + D +
Sbjct: 447 TYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEM 506

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK-AIGPTHVTYTVVIKGLCKQWK 463
              G++P    YTT        G+ ++   L +EM  +    P    Y V I GLCK   
Sbjct: 507 LRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGN 566

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           L++A++    ++ +G+ PD +TY T+IR + +    + A  L ++M    L P+  TY +
Sbjct: 567 LEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFV 626

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           LI G    G L+ A      +++  +    + +  ++   C  G++ +A  + C+M E+G
Sbjct: 627 LIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEG 686

Query: 584 FEISIRDYT 592
              +   YT
Sbjct: 687 ISPNKYSYT 695



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 261/535 (48%), Gaps = 20/535 (3%)

Query: 4   FVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETP 60
           +VY++  M    +    KM       S++  N +L  LR + +M    ++Y+ + +    
Sbjct: 212 WVYTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIM 271

Query: 61  RNVYTNSIVIDGLCQQSRLQ--DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
             V T + ++D   +   L+  D I    +    EF  S V+ N +++ + K G  E A+
Sbjct: 272 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEF--SEVTYNILINGFSKSGKMEEAR 329

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
                M + G     +S+N LI G C  G  +EA   T++M   G+ P   TY+I  +  
Sbjct: 330 RFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRAL 389

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               +I  A    ++LL   + PD+V+Y  L+ GY ++    E   L + + +     ++
Sbjct: 390 CEFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSI 445

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y+ L+  +C+SG ++ A  L  EM +  + PD++TY+ L++G  K   +  A ++Y+E
Sbjct: 446 VTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDE 505

Query: 299 MCSKRISPNSFAH-----GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           M  K I P+ +A+     G + LG  EK      R++ + +   +   D+ +YN+ IDG 
Sbjct: 506 MLRKGIKPDGYAYTTRTVGELRLGDSEKAF----RLHEEMVAEDHHAPDLTIYNVRIDGL 561

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K+GN+ +A++  R++    + P  VT+ ++I G+ + G+   AR L D +    L PS 
Sbjct: 562 CKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSV 621

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           +TY   ++ + + G +++      EM+ + + P  +T+  ++ G+CK   + EA + L  
Sbjct: 622 ITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCK 681

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           M   G++P++ +Y  +I   C      +  +L  +M    +EP   T+  L   L
Sbjct: 682 MEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 736



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 205/432 (47%), Gaps = 40/432 (9%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I+I+G  +  ++++A  F  +     F  +  S N ++  YCK G  + A G+   M
Sbjct: 311 TYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEM 370

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L  G++P   +YNI I  LC  G +++A E  + M      PD ++Y+ L  G+  + + 
Sbjct: 371 LNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMRKF 426

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +   L     +P IVTY  LI G C+ GN+E   +L+E M SQ    +VI Y+ L
Sbjct: 427 VEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTL 486

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPD-------------------------------- 272
           L    K+G +  A  +  EM   G+KPD                                
Sbjct: 487 LKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDH 546

Query: 273 ----LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
               L  Y++ I GLCK   + KAI+   ++    + P+   +  ++ G  EK     AR
Sbjct: 547 HAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMAR 606

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             +D ++       V+ Y ++I G+ K G + +A Q   ++ ++ + P+++T N+L++G 
Sbjct: 607 DLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGM 666

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           CK G + +A R L  ++  G+ P+  +YT  ++ +C+    + ++ L +EM  K I P  
Sbjct: 667 CKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDG 726

Query: 449 VTYTVVIKGLCK 460
            T+  + K L K
Sbjct: 727 YTHRALFKHLEK 738



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 179/374 (47%), Gaps = 20/374 (5%)

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K+    K +  + +M  K   P+      +L  L +  M+ +A+  +++++M   +  V+
Sbjct: 216 KKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVI 275

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            +N M+D   K G++    +++ ++  + I  S VT+N LI GF K+GK+ +ARR    +
Sbjct: 276 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDM 335

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           +  G   +  ++   +  YC++G       +  EM    I PT  TY + I+ LC+  ++
Sbjct: 336 QRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRI 395

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            +A +LL  M      PD ++YNT++  + K +   +A  L + +   N+ P+  TYN L
Sbjct: 396 DDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTL 451

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           IDGLC +G+L+ A  L   +    I    + YTT++K     G++  A   + +M+ KG 
Sbjct: 452 IDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGI 511

Query: 585 -------------EISIRDYTKSFFC---MMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
                        E+ + D  K+F     M+  +   PD  I  V +    + G+L    
Sbjct: 512 KPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAI 571

Query: 629 ELAAVMIKSGLLPD 642
           E    + + GL+PD
Sbjct: 572 EFQRKIFRVGLVPD 585



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 139/325 (42%), Gaps = 24/325 (7%)

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           +K M  +  + F+ +I    +  V   NI++        + +A ++Y  ++   I P+++
Sbjct: 216 KKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVI 275

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           TFN+++    K G +    ++   +K   +E S VTY   +N + + G ++       +M
Sbjct: 276 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDM 335

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
           +      T  ++  +I+G CKQ    EA  + ++M   G+ P   TYN  IR+ C+   +
Sbjct: 336 QRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRI 395

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
             A +LL+ M      P   +YN L+ G         A  L   L+  NI+ + V Y T+
Sbjct: 396 DDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTL 451

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
           I   C  G++  A     +M  +     +  YT                     +L  F 
Sbjct: 452 IDGLCESGNLEGAQRLKEEMTSQLIYPDVITYT--------------------TLLKGFV 491

Query: 620 QGGDLGSVFELAAVMIKSGLLPDKF 644
           + G+L    E+   M++ G+ PD +
Sbjct: 492 KNGNLSMATEIYDEMLRKGIKPDGY 516


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 251/525 (47%), Gaps = 10/525 (1%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           + PR +  +   +  L  +  L DA L L E++ +   P     N ++   C+ G  + A
Sbjct: 66  QAPRRLLGSDRRLSALVHRGDL-DAALRLVESSPRP--PDAALANRLVRDLCRRGRPDDA 122

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + +   +   G      +Y  L  G C AG + +A      M    V+P+A TY+ L   
Sbjct: 123 ERV---VGACGPAATVVAYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHT 176

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                Q+  A  V+  +L +G  PD+VTY +L+   C+     + ++L ++M ++G   N
Sbjct: 177 LCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPN 236

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + Y+VL+  MC  G +D+AL LL  + + G KP  V Y+ +++GLC  ++   A +L  
Sbjct: 237 NVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVT 296

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM  +   PN      ++  LC K ++ +A    + +    C  ++V YN +I+G  +  
Sbjct: 297 EMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQR 356

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N+  A+ L  ++      P IVT+N+L+ G C   +  DA  L+D +  +G  P  VT+ 
Sbjct: 357 NVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFN 416

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T +   C++G +   + + ++M  K   P  +TY+ +I GL K  KL +A++L  +M   
Sbjct: 417 TLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHK 476

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G  PD+I Y  +         + +A Q + ++    + P +  YN ++ GLC NG  + A
Sbjct: 477 GFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFA 535

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
             ++  +         + Y  +I+    EG +++A     ++  +
Sbjct: 536 IDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSR 580



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/459 (24%), Positives = 212/459 (46%), Gaps = 22/459 (4%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           PD      L+   C+ G  ++  +   V+ + G    V+AY  L    C++GR+ +A  +
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAER---VVGACGPAATVVAYGALTDGYCRAGRLGDARRV 157

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           +  M    ++P+  TY+ LI  LC++ +V  A+ + ++M  +  +P+   +  +L   C+
Sbjct: 158 VGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK 214

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
                +A    D +    C  + V YN+++DG    G++ +A++L R L      PS V 
Sbjct: 215 GRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVN 274

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +N+++ G C   +  DA  L+  +      P+  T+   + + C +G +Q+ + LL++M 
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 334

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
                   VTY  +I GLC+Q  +  A+ LL  M   G  PD +TYNT+++  C      
Sbjct: 335 KHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWV 394

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
            A +L++ M  +   P + T+N LI  LC  G + +A  +   + +   +   + Y+TII
Sbjct: 395 DAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTII 454

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGF---------------EISIRDYTKSFFCMMLSNGFP 605
                   + +A+  F +M  KGF               + +I +  ++    +  +G  
Sbjct: 455 SGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVR-KLQDSGIS 513

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           P   +   +L+   + G      ++ A M+ SG +PD  
Sbjct: 514 PHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDL 552



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 199/439 (45%), Gaps = 41/439 (9%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSE-TPRNVYT 65
           G V DA+ V+  M        + TYN LL      R      +L D ++    TP NV  
Sbjct: 181 GQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTY 240

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           N +++DG+C +  + DA+  L+        PS V+ N ++   C       A  L   ML
Sbjct: 241 N-VLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEML 299

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           +    P+  ++N++I+ LC  G +++A++    M +HG   + +TY+ +  G      + 
Sbjct: 300 RENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVD 359

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
           GA  ++ K+   G  PDIVTY  L+ G C      +  +L + M   G   + + ++ L+
Sbjct: 360 GAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLI 419

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +C+ G + +A+ +  +M   G  P+ +TYS +I GL K  K+ +A++L+NEM  K  +
Sbjct: 420 GFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFN 479

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+                           +++ C+ D                I EA+Q 
Sbjct: 480 PDKIYQ-----------------------LLAECLNDD-------------DTIEEAIQT 503

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
            R+L +  ISP  V +N+++ G C+NGK   A  ++  +   G  P  +TY   +     
Sbjct: 504 VRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAY 563

Query: 426 EGNIQRLLALLQEMETKAI 444
           EG +     LL ++ ++ +
Sbjct: 564 EGYLNEARELLIKLCSRDV 582



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 161/344 (46%), Gaps = 37/344 (10%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTN 66
           G V DA+ ++  +     K S   YN++L  L   +   D   L  ++     P N  T 
Sbjct: 251 GDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATF 310

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           ++VI  LC++  LQ AI  L++ +      ++V+ NAI++  C+    + A GL   M  
Sbjct: 311 NVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKS 370

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           YG  PD  +YN L+ GLC A    +A E  ++M ++G  PD +T++ L         +  
Sbjct: 371 YGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVD 430

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN--------- 237
           A +V +++  KG  P+ +TY+ +I G  +   +++ L+L   M  +GF  +         
Sbjct: 431 AIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAEC 490

Query: 238 -------------------------VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
                                     + Y+ +L  +C++G+ + A+ ++  M + G  PD
Sbjct: 491 LNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPD 550

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
            +TY ILI GL  +  +++A +L  ++CS+ +  NS      LL
Sbjct: 551 DLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIKSEALL 594


>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 160/602 (26%), Positives = 284/602 (47%), Gaps = 29/602 (4%)

Query: 4   FVYSR---TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMWDL--YDDIKVS 57
           F+++R    G V  A+ V  ++K      +  TY  ++  L +  D+   L  +++++  
Sbjct: 200 FLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERV 259

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               + Y  +  I+GLC   R       LQ          V +  A++  +C     + A
Sbjct: 260 GVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEA 319

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           +G+F  M + G+ PD + Y+ LIHG C + ++  AL   ++M   GV+ + +  S +   
Sbjct: 320 QGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCI--- 376

Query: 178 FHLLSQISGAWKVI---QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
            H L ++    +V+   ++L   G   D V Y ++    C +G VE+ +++ E M S+  
Sbjct: 377 LHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRL 436

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
            L+V  Y+ L++  C  G +  A  +  EM+  GLKPD+VTY++L  GL +     + ++
Sbjct: 437 GLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVK 496

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L + M S+ + PNS  H  I+ GLC    + EA +YF+SL   N    + +Y+ M++GY 
Sbjct: 497 LLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKN----IEIYSAMVNGYC 552

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           +   + ++ +++ +L+ +       +   L+   C  G +  A +LLD + L  +EPS +
Sbjct: 553 ETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKI 612

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            Y+  + A C+ G+++    L      +   P  VTYT++I   C+   LQEA  L +DM
Sbjct: 613 MYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDM 672

Query: 475 YVIGVTPDQITYNTIIRSFCK--------CKDLRKAFQLLNQMWLHNLE-----PTSATY 521
              G+ PD IT+  ++    K            RK   L     L ++E     P    Y
Sbjct: 673 KRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCY 732

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
            +L+DG     + + A  L   + E  +    + YT ++   C  G V KA+T   +M  
Sbjct: 733 TVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSS 792

Query: 582 KG 583
           KG
Sbjct: 793 KG 794



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 239/512 (46%), Gaps = 41/512 (8%)

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           AI FL +T  +   P V++ N + +R  + G  + A  ++  + ++G  P+ ++Y I+I 
Sbjct: 179 AIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIK 238

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
            LC  G +++ L    +M R GV P +  ++   +G     +    ++V+Q    KG+ P
Sbjct: 239 ALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFR-KGNAP 297

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
                                             L V AY+ ++   C   ++DEA G+ 
Sbjct: 298 ----------------------------------LEVYAYTAVVRGFCNEMKLDEAQGVF 323

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            +ME  G+ PD+  YS LI G CK   + +A+ L++EM S+ +  N      IL  L E 
Sbjct: 324 DDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEM 383

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
            M  E    F  L  S    D V YNI+ D    LG + +AV++  ++  KR+   +  +
Sbjct: 384 GMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHY 443

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
            +LI G+C  G +  A  +   +K  GL+P  VTY          G+ +  + LL  ME+
Sbjct: 444 TTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMES 503

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT-YNTIIRSFCKCKDLR 500
           + + P   T+ ++I+GLC   K+ EA     ++Y   +    I  Y+ ++  +C+   ++
Sbjct: 504 QGMKPNSTTHKMIIEGLCSGGKVLEA-----EVYFNSLEDKNIEIYSAMVNGYCETDLVK 558

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           K++++  ++         A+   L+  LC+ GD++ A  LL  +   N+  +K+ Y+ I+
Sbjct: 559 KSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKIL 618

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            A C  GD+  A T F   V +GF   +  YT
Sbjct: 619 AALCQAGDMKNARTLFDVFVHRGFTPDVVTYT 650



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 230/485 (47%), Gaps = 17/485 (3%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D    ++DD++      +VY  S +I G C+   L  A+    E   +    + V ++ I
Sbjct: 317 DEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCI 376

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +    ++G        F  + + G+  D  +YNI+   LC+ G +E+A+E   +M    +
Sbjct: 377 LHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRL 436

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
             D   Y+ L  G+ L   +  A+ + +++  KG  PDIVTY VL  G  + G+  E +K
Sbjct: 437 GLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVK 496

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L + M SQG K N   + +++  +C  G++ EA      +E      ++  YS ++ G C
Sbjct: 497 LLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLE----DKNIEIYSAMVNGYC 552

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           + D V K+ +++ ++ ++       +   +L  LC    I +A    D +++SN     +
Sbjct: 553 ETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKI 612

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           +Y+ ++    + G++  A  L+   + +  +P +VT+  +I  +C+   + +A  L   +
Sbjct: 613 MYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDM 672

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLA-------------LLQEMETKAIGPTHVTY 451
           K  G++P  +T+T  ++   +E   +R  +             +L++ME   I P  V Y
Sbjct: 673 KRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCY 732

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           TV++ G  K    Q+AV L + M   G+ PD ITY  ++   C    + KA  LLN+M  
Sbjct: 733 TVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSS 792

Query: 512 HNLEP 516
             + P
Sbjct: 793 KGMTP 797



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 121/234 (51%), Gaps = 13/234 (5%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++  LC    ++ A+  L         PS +  + I++  C+ G  + A+ LF + +  G
Sbjct: 582 LLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRG 641

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF---HLLSQIS 185
             PD  +Y I+I+  C    ++EA +   DM R G++PD IT+++L  G    +L  + S
Sbjct: 642 FTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFS 701

Query: 186 GAWK----------VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
              K          +++ +     +PD+V YTVL+ G+ +  N ++ + L + M+  G +
Sbjct: 702 SHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLE 761

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
            + I Y+ L+S +C  G +++A+ LL EM + G+ PD+   S L RG+ K  KV
Sbjct: 762 PDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRGIIKARKV 815


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 152/675 (22%), Positives = 299/675 (44%), Gaps = 54/675 (8%)

Query: 18  VIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           V+  M++   + +   Y +L+     + H+D+M  L+  ++       V+  + +I G  
Sbjct: 155 VVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFA 214

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           ++ R+  A+  L E         +V  N  +  + K+G  ++A   F  +   GL PD  
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +Y  +I  LC A  ++EA+E    + ++   P    Y+ +  G+    +   A+ ++++ 
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             KGS P ++ Y  ++    ++G V+E L++ E M       N+  Y++L+  +C++G++
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAP-NLSTYNILIDMLCRAGKL 393

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D A  L   M+  GL P++ T +I++  LCK  K+ +A  ++ +M  K  +P+     ++
Sbjct: 394 DCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSL 453

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + GL +   + +A   ++ ++ S+C  + ++Y  +I  +   G   +  ++Y+ ++ +  
Sbjct: 454 IDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNC 513

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF--------------- 419
           SP +   N+ +    K G+    R + + IK     P A +Y+                 
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYE 573

Query: 420 --------------------MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
                               ++ +C+ G + +   LL+EM+TK   PT VTY  VI GL 
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K  +L EA  L E+     +  + + Y+++I  F K   + +A+ +L ++    L P   
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVY 693

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           T+N L+D L    ++  A     S++E   +  +V Y  +I   C     +KA  F+ +M
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753

Query: 580 VEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDL 624
            ++G + S   YT                + F    +NG  PD      M+     G   
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813

Query: 625 GSVFELAAVMIKSGL 639
              F L     + GL
Sbjct: 814 MDAFSLFEETRRRGL 828



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 149/619 (24%), Positives = 281/619 (45%), Gaps = 39/619 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRN 62
           +++ G V  A+ ++ +MK   L   I  YN  + +   +   D+ W  + +I+ +    +
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272

Query: 63  VYTNSIVIDGLCQQSRLQDAI-----------------------------------LFLQ 87
             T + +I  LC+ +RL +A+                                     L+
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
               K   PSV++ N I++   K+G  + A  +F  M K    P+  +YNILI  LC AG
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAG 391

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            ++ A E  + M + G+ P+  T +I+        ++  A  + +++  K   PD +T+ 
Sbjct: 392 KLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFC 451

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            LI G  ++G V++  K+ E ML    + N I Y+ L+ +    GR ++   +  +M   
Sbjct: 452 SLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQ 511

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
              PDL   +  +  + K  +  K   ++ E+ S+R  P++ ++  ++ GL +     E 
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANET 571

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F S+    C+ D   YNI+IDG+ K G + +A QL  ++  K   P++VT+ S+I G
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
             K  ++ +A  L +  K   +E + V Y++ ++ + + G I     +L+E+  K + P 
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             T+  ++  L K  ++ EA+   + M  +  TP+Q+TY  +I   CK +   KAF    
Sbjct: 692 VYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M    ++P++ +Y  +I GL   G++  A  L    + +        Y  +I+      
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811

Query: 568 DVHKAMTFFCQMVEKGFEI 586
               A + F +   +G  I
Sbjct: 812 RAMDAFSLFEETRRRGLHI 830



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 146/595 (24%), Positives = 270/595 (45%), Gaps = 39/595 (6%)

Query: 32  QTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
           ++YNSLL  +   R+ D +  +  ++ V+    +V T   ++    + ++L++    +Q 
Sbjct: 99  ESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQN 158

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
               +F P+  +   ++  +  +  +++   LF  M + G  P    +  LI G    G 
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT- 207
           ++ AL   ++M    ++ D + Y++    F  + ++  AWK   ++   G  PD VTYT 
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278

Query: 208 ----------------------------------VLICGYCQIGNVEEGLKLREVMLSQG 233
                                              +I GY   G  +E   L E   ++G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              +VIAY+ +L+ + K G++DEAL +  EM+     P+L TY+ILI  LC+  K+  A 
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALRVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDCAF 397

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           +L + M    + PN      ++  LC+ + + EA   F+ +    C  D + +  +IDG 
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGL 457

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K+G + +A ++Y ++++     + + + SLI  F  +G+  D  ++   +      P  
Sbjct: 458 GKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDL 517

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
               T+M+   + G  ++  A+ +E++++   P   +Y+++I GL K     E  +L   
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYS 577

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G   D   YN +I  FCKC  + KA+QLL +M     EPT  TY  +IDGL     
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           L  A  L    +   I L  V Y+++I      G + +A     ++++KG   ++
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNV 692



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 258/545 (47%), Gaps = 6/545 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRN 62
           Y   G   +A  ++ + +      S+  YN +L  LR     D    +++++K    P N
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAP-N 376

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T +I+ID LC+  +L  A             P+V ++N ++ R CK    + A  +F 
Sbjct: 377 LSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFE 436

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M      PD  ++  LI GL   G +++A +    M       ++I Y+ L K F    
Sbjct: 437 QMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHG 496

Query: 183 QISGAWKVIQKLLIKGSDPDI-VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           +     K+ + ++ +   PD+ +  T + C + + G  E+G  + E + S+ F  +  +Y
Sbjct: 497 RKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMF-KAGEPEKGRAMFEEIKSRRFVPDARSY 555

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S+L+  + K+G  +E   L Y M+  G   D   Y+I+I G CK  KV+KA QL  EM +
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKT 615

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   P    +G+++ GL + + + EA M F+         +VV+Y+ +IDG+ K+G I E
Sbjct: 616 KGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDE 675

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  +  +L++K ++P++ T+NSL+    K  ++ +A     ++K     P+ VTY   +N
Sbjct: 676 AYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILIN 735

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C+     +     QEM+ + + P+ ++YT +I GL K   + EA  L +     G  P
Sbjct: 736 GLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP 795

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D   YN +I           AF L  +     L   + T  +L+D L  N  L+ A  + 
Sbjct: 796 DSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVG 855

Query: 542 VSLQE 546
             L+E
Sbjct: 856 AVLRE 860



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 220/481 (45%), Gaps = 36/481 (7%)

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
           A  + E  +   +M +    P    Y+ L   F  ++       + Q++   G +P +  
Sbjct: 146 ANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHL 205

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           +T LI G+ + G V+  L L + M S     +++ Y+V + S  K G++D A    +E+E
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
           A GLKPD VTY+ +I  LCK +++ +A++++  +   R  P ++A+  +++G        
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           EA    +       I  V+ YN ++    K+G + EA++++ ++ +K  +P++ T+N LI
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILI 384

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
              C+ GK+  A  L D+++  GL P+  T    ++  C+   +    A+ ++M+ K   
Sbjct: 385 DMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCT 444

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF------------ 493
           P  +T+  +I GL K  ++ +A ++ E M       + I Y ++I++F            
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504

Query: 494 --------C---------------KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
                   C               K  +  K   +  ++      P + +Y+ILI GL  
Sbjct: 505 YKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIK 564

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            G       L  S++E    L   AY  +I   C  G V+KA     +M  KGFE ++  
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624

Query: 591 Y 591
           Y
Sbjct: 625 Y 625



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/487 (23%), Positives = 203/487 (41%), Gaps = 22/487 (4%)

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
           + F  L QI G      ++ + G  P + T   ++    +   + EG  + + M    F+
Sbjct: 112 RNFDALDQILG------EMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFR 165

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
               AY+ L+ +       D  L L  +M+ +G +P +  ++ LIRG  K+ +V  A+ L
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
            +EM S  +  +   +   +    +   +  A  +F  +  +    D V Y  MI    K
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
              + EAV+++  L + R  P    +N++I G+   GK  +A  LL+  +  G  PS + 
Sbjct: 286 ANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIA 345

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y   +    + G +   L + +EM+  A  P   TY ++I  LC+  KL  A +L + M 
Sbjct: 346 YNCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKLDCAFELRDSMQ 404

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G+ P+  T N ++   CK + L +A  +  QM      P   T+  LIDGL   G + 
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVD 464

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG------------ 583
           +A  +   + + +     + YT++IK     G        +  MV +             
Sbjct: 465 DAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYM 524

Query: 584 ---FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
              F+    +  ++ F  + S  F PD     +++    + G     +EL   M + G +
Sbjct: 525 DCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 584

Query: 641 PDKFLIN 647
            D    N
Sbjct: 585 LDTRAYN 591



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 132/316 (41%), Gaps = 14/316 (4%)

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN ++    +  N     Q+  ++      PS+ T   ++    K  K+ +   ++  ++
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMR 160

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
                P+   YTT + A+    +   +L L Q+M+     PT   +T +I+G  K+ ++ 
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
            A+ LL++M    +  D + YN  I SF K   +  A++  +++  + L+P   TY  +I
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
             LC    L  A  +   L+++       AY T+I  + + G   +A +   +   KG  
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340

Query: 586 ISIRDYTKSFFCMM--------------LSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
            S+  Y     C+               +     P+     +++    + G L   FEL 
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELR 400

Query: 632 AVMIKSGLLPDKFLIN 647
             M K+GL P+   +N
Sbjct: 401 DSMQKAGLFPNVRTVN 416


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/485 (28%), Positives = 234/485 (48%), Gaps = 39/485 (8%)

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           L F E A  LF  M++    P    +  L++ +      +  +   + +   GV  D  T
Sbjct: 51  LQFNE-ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
            ++L   F   SQ   A   + K++  G +PDIVT+T LI G+C    +EE + +   M+
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
             G K +V+ Y+ ++ S+CK+G ++ AL L  +ME  G++PD+V Y+ L+ GLC   +  
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A  L   M  ++I P                                   DV+ +N +I
Sbjct: 230 DADSLLRGMTKRKIKP-----------------------------------DVITFNALI 254

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           D +VK G   +A +LY ++I   I+P+I T+ SLI GFC  G V +AR++   ++  G  
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P  V YT+ +N +C+   +   + +  EM  K +    +TYT +I+G  +  K   A ++
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE---PTSATYNILIDG 527
              M   GV P+  TYN ++   C    ++KA  +   M    ++   P   TYN+L+ G
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC NG L+ A  +   +++  + +  + YT II+  C  G V  A+  FC +  KG + +
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPN 494

Query: 588 IRDYT 592
           +  YT
Sbjct: 495 VVTYT 499



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 239/458 (52%), Gaps = 3/458 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS++    +++   K+   +V   L   +   G+  D ++ N+L++  C +     A  F
Sbjct: 70  PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + G EPD +T++ L  GF L +++  A  ++ +++  G  PD+V YT +I   C+
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G+V   L L + M + G + +V+ Y+ L++ +C SGR  +A  LL  M    +KPD++T
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ LI    K+ K   A +LYNEM    I+PN F + +++ G C +  + EAR  F  + 
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C  DVV Y  +I+G+ K   + +A++++ ++ +K ++ + +T+ +LI GF + GK  
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK---AIGPTHVTYT 452
            A+ +   +   G+ P+  TY   ++  C  G +++ L + ++M+ +    + P   TY 
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
           V++ GLC   KL++A+ + EDM    +    ITY  II+  CK   ++ A  L   +   
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
            ++P   TY  +I GL   G    A  L   ++E  +S
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 225/458 (49%), Gaps = 38/458 (8%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           +++  ++  D++ +L D +++     ++YT +++++  CQ S+   A  FL +     F 
Sbjct: 80  NVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFE 139

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P +V+  ++++ +C     E A  +   M++ G+ PD   Y  +I  LC  G +  AL  
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + M  +G+ PD + Y+ L  G     +   A  +++ +  +   PD++T+  LI  + +
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G   +  +L   M+      N+  Y+ L++  C  G +DEA  + Y ME  G  PD+V 
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G CK  KV  A++++ EM  K ++ N+                           
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT--------------------------- 352

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                   + Y  +I G+ ++G    A +++  ++ + + P+I T+N L++  C NGKV 
Sbjct: 353 --------ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404

Query: 396 DARRLLDTIK---LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
            A  + + ++   + G+ P+  TY   ++  C  G +++ L + ++M  + +    +TYT
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           ++I+G+CK  K++ AV L   +   GV P+ +TY T+I
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 202/386 (52%), Gaps = 3/386 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T + +I+G C  +R+++A+  + +       P VV    I+   CK G    A  LF
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M  YG+ PD   Y  L++GLC +G   +A      M +  ++PD IT++ L   F   
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A ++  +++     P+I TYT LI G+C  G V+E  ++  +M ++G   +V+AY
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L++  CK  ++D+A+ + YEM   GL  + +TY+ LI+G  +  K + A ++++ M S
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLI---MSNCIQDVVLYNIMIDGYVKLGN 358
           + + PN   +  +L  LC    + +A M F+ +    M     ++  YN+++ G    G 
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + +A+ ++  + ++ +   I+T+  +I G CK GKV +A  L  ++   G++P+ VTYTT
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTT 500

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAI 444
            ++    EG       L ++M+   +
Sbjct: 501 MISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 162/358 (45%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y  +L +   S + +EAL L   M      P ++ ++ L+  + K  K    I L + + 
Sbjct: 40  YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
              +S + +    ++   C+      A  +   ++      D+V +  +I+G+     + 
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+ +  Q++E  I P +V + ++I   CKNG V  A  L D ++ +G+ P  V YT+ +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N  C  G  +   +LL+ M  + I P  +T+  +I    K+ K  +A +L  +M  + + 
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+  TY ++I  FC    + +A Q+   M      P    Y  LI+G C    + +A  +
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
              + +  ++   + YTT+I+     G  + A   F  MV +G   +IR Y     C+
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397



 Score = 40.8 bits (94), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 45/237 (18%), Positives = 82/237 (34%), Gaps = 15/237 (6%)

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +GN  + L+  + ++          Y  +++      +  EA+ L   M      P  I 
Sbjct: 15  KGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           +  ++    K K       L + + +  +     T N+L++  C +     A   L  + 
Sbjct: 75  FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK------------ 593
           +       V +T++I   C    + +AM+   QMVE G +  +  YT             
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194

Query: 594 ---SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              S F  M + G  PD  +   ++      G       L   M K  + PD    N
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 165/619 (26%), Positives = 276/619 (44%), Gaps = 101/619 (16%)

Query: 62  NVYTNSIVIDGLCQQSRLQ--DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           NV T   ++ G  ++ +      I+ +  T G    PS+   N+++  YC  G    A  
Sbjct: 305 NVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSL--FNSLVHGYCNAGDYAYAYK 362

Query: 120 LFCLMLKYGLHPDAFSYNILIHG------------------------------------- 142
           LF  M   G  P   +YNI I                                       
Sbjct: 363 LFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTAN 422

Query: 143 ----LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
               LC  G  E+A +   +M R G  PD  TY+ +        ++  ++ + Q++   G
Sbjct: 423 FSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAG 482

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
            +PD+ TYT+LI  +C+ G +E+     + M S G   NV+ Y+ LL +  KS ++ +A 
Sbjct: 483 VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAH 542

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY------------------NEMC 300
            + + M      P+ VTYS LI GLCK  ++ KA ++Y                  N+ C
Sbjct: 543 DIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTC 602

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +  I+PN   +GA++ GLC+ + +++A    D+++ + C  + ++Y+ +IDG+ K+G I 
Sbjct: 603 T--IAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKID 660

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A +++ ++ +    PS+ T+ SLI    K+G++  A ++L  +      P+ VTYT  +
Sbjct: 661 NAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMI 720

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +   + G I++ L LL  ME K   P  VTYT +I GL K  K   +++L + M   G  
Sbjct: 721 DGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCA 780

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQM----WLHNLE--------------------- 515
           P+ +TY  +I   C    L +A  LL++M    W  +L+                     
Sbjct: 781 PNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLE 840

Query: 516 --------PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA---YTTIIKAHC 564
                   P +  Y +LID     G L+ A  L   L E + SL   +   Y ++I+A C
Sbjct: 841 EMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALC 900

Query: 565 AEGDVHKAMTFFCQMVEKG 583
               V +A T + +M  KG
Sbjct: 901 LASQVEEAFTLYTEMTRKG 919



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 153/596 (25%), Positives = 268/596 (44%), Gaps = 35/596 (5%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
           R G+  +A+  + ++K+   + S  TYN+L   L +    ++ + +  ++  S    +  
Sbjct: 181 RHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRS 240

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T       LC+  R  DA+  L++   ++F    V    ++S   +      A      M
Sbjct: 241 TIGYFAQALCKVGRWADALNMLEK---EDFNLDTVLCTQMISGLMEASLFNEAMSFLHRM 297

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
                 P+  +Y  L+ G              N M   G  P+   ++ L  G+      
Sbjct: 298 RCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDY 357

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLI---CGYCQIGNVE-----EGLKLREVMLSQGFKL 236
           + A+K+  ++   GS P  V Y + I   CG  ++ N E     E  K+ E ML+    L
Sbjct: 358 AYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVE--KVYEEMLAASCVL 415

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N +  +     +C  G+ ++A  +L EM   G  PD  TY+ +I  LC+  KV K+  L+
Sbjct: 416 NKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLF 475

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM    ++P+ + +  ++   C+  +I +AR +FD +    C  +VV Y  ++  Y+K 
Sbjct: 476 QEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKS 535

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             + +A  ++ ++++    P+ VT+++LI G CK G++  A  + +  KL G   +  + 
Sbjct: 536 KQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYE--KLIGTSGNVESD 593

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
             F      EGN           +T  I P  VTY  +I GLCK  K+ +A +LL+ M  
Sbjct: 594 FYF------EGN-----------DTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLA 636

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G  P+QI Y+ +I  FCK   +  A ++  +M      P+  TY  LID +  +G L  
Sbjct: 637 AGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDL 696

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           A  +L  +   + +   V YT +I      G++ KA+     M EKG   ++  YT
Sbjct: 697 AMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYT 752



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 229/475 (48%), Gaps = 21/475 (4%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L+ ++K +    +VYT +I+ID  C+   ++ A  +  E       P+VV+  A++  Y 
Sbjct: 474 LFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYL 533

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE-FTNDMGRHG----- 163
           K      A  +F  M+    +P+A +Y+ LI GLC AG +++A E +   +G  G     
Sbjct: 534 KSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESD 593

Query: 164 ----------VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
                     + P+ +TY  L  G     ++S A +++  +L  G +P+ + Y  LI G+
Sbjct: 594 FYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGF 653

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+IG ++   ++   M   G+  +V  Y+ L+  M K GR+D A+ +L EM      P++
Sbjct: 654 CKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNV 713

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VTY+ +I GL K  ++ KA+ L + M  K  SPN   + A++ GL +      +   F  
Sbjct: 714 VTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQ 773

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +    C  + V Y ++I+     G + EA  L  ++        +  ++  + GF K  K
Sbjct: 774 MNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK--K 831

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME--TKAIGPTHV-T 450
              +  LL+ ++ H   P A  Y   ++++ + G ++  L L +E+   + ++  T    
Sbjct: 832 FIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGM 891

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           Y  +I+ LC   +++EA  L  +M   G+ PD I + ++++   +     +A QL
Sbjct: 892 YASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/528 (23%), Positives = 221/528 (41%), Gaps = 47/528 (8%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N+L+   C  G  +EALE    +   G  P A+TY+ L +      Q+   ++V +++  
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
            G   D  T        C++G   + L + E    + F L+ +  + ++S + ++   +E
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLE---KEDFNLDTVLCTQMISGLMEASLFNE 289

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+  L+ M      P++VTY  L+ G  K+ +     ++ N M ++  +PN     +++ 
Sbjct: 290 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVH 349

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID---GYVKLGNIGEAVQLYRQLIEKR 373
           G C       A   F+ +         V YNI I    G  +L N  E + L  ++ E+ 
Sbjct: 350 GYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPN-AELLDLVEKVYEEM 408

Query: 374 ISPSIVTFNSLIYGF----CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           ++ S V        F    C  GK   A ++L  +   G  P   TYT  +   C+   +
Sbjct: 409 LAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKV 468

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           ++   L QEM+   + P   TYT++I   CK   +++A    ++M  +G +P+ +TY  +
Sbjct: 469 EKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTAL 528

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA------------ 537
           + ++ K K L +A  + ++M      P + TY+ LIDGLC  G+++ A            
Sbjct: 529 LHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSG 588

Query: 538 ----DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
               D          I+   V Y  +I   C    V  A      M+  G E        
Sbjct: 589 NVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCE-------- 640

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                       P+Q + + ++  F + G + +  E+   M K G LP
Sbjct: 641 ------------PNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLP 676



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 215/474 (45%), Gaps = 33/474 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN-LRHTDIMW--DLYDDIKVSETPRN 62
           + + G++  A     +M+ +    ++ TY +LL+  L+   ++   D++  +  +    N
Sbjct: 497 FCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPN 556

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T S +IDGLC+   +Q A    ++  G   G          +  C +           
Sbjct: 557 AVTYSALIDGLCKAGEIQKACEVYEKLIGTS-GNVESDFYFEGNDTCTIA---------- 605

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
                   P+  +Y  LI GLC A  + +A E  + M   G EP+ I Y  L  GF  + 
Sbjct: 606 --------PNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIG 657

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +I  A +V  ++   G  P + TYT LI    + G ++  +K+   ML+     NV+ Y+
Sbjct: 658 KIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYT 717

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++  + K G I++AL LL  ME  G  P++VTY+ LI GL K  K   +++L+ +M SK
Sbjct: 718 AMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSK 777

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK--LGNIG 360
             +PN   +  ++   C   ++ EA +  D +  ++  + +  Y+  + G+ K  + ++G
Sbjct: 778 GCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLG 837

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA----RRLLDTIKLHGLEPSAVTY 416
               L  ++      P    +  LI  F K G++  A    + L++      +  + + Y
Sbjct: 838 ----LLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGM-Y 892

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
            + + A C    ++    L  EM  K I P  + +  ++KGL +  K  EA+QL
Sbjct: 893 ASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 150/307 (48%), Gaps = 10/307 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           + + G + +A  V  +M +     S+ TY SL   ++     D+   +  ++       N
Sbjct: 653 FCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPN 712

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +IDGL +   ++ A+  L     K   P+VV+  A++    K G A+ +  LF 
Sbjct: 713 VVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFK 772

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT-YSILAKGFHLL 181
            M   G  P+  +Y +LI+  C AG ++EA    ++M +H   P  +  Y    +GF   
Sbjct: 773 QMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEM-KHTHWPKHLQGYHCAVQGFS-- 829

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA- 240
            +   +  +++++    + P    Y +LI  + + G +E  L+L + ++     LN+ + 
Sbjct: 830 KKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTST 889

Query: 241 --YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+ L+ ++C + +++EA  L  EM   G+ PDL+ +  L++GL + +K  +A+QL   
Sbjct: 890 GMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYG 949

Query: 299 MCSKRIS 305
            C + ++
Sbjct: 950 RCHEGVN 956



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/331 (21%), Positives = 122/331 (36%), Gaps = 53/331 (16%)

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           L N+++    + G   EA++   +L +    PS VT+N+L+      G+V    R+   +
Sbjct: 171 LLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEM 230

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGN--------------------------------IQRL 432
              G      T   F  A C+ G                                     
Sbjct: 231 SASGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEA 290

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           ++ L  M   +  P  VTY  ++ G  K+ +     +++  M   G  P+   +N+++  
Sbjct: 291 MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHG 350

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC--LLVSLQEHNIS 550
           +C   D   A++L N+M      P    YNI I  +C   +L NA+   L+  + E  ++
Sbjct: 351 YCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLA 410

Query: 551 ----LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM------ 598
               L KV      +  C  G   KA     +M+ KGF      YTK  +F C       
Sbjct: 411 ASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEK 470

Query: 599 -------MLSNGFPPDQEICEVMLIAFHQGG 622
                  M   G  PD     +++ +F + G
Sbjct: 471 SFLLFQEMKRAGVNPDVYTYTILIDSFCKAG 501


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 254/502 (50%), Gaps = 6/502 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSE----TPRNV 63
           ++G V +A+ +  +M+E  +  S+ T+  L+  L+ +D   ++   ++  E    TP  V
Sbjct: 278 KSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEV 337

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             N + ID  C++    +AI    E   KE   + V+ N I    CK G  E A+ +   
Sbjct: 338 ICNEL-IDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEE 396

Query: 124 MLKYGLHPDAFSYNILIHGLC-IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           ML  G+   +  +N ++ GL    G +E  +   ++M + G++P+    +   K      
Sbjct: 397 MLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGR 456

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +   A  +  K+L KG   +I T   LI G C+  N++   ++   M+++G +L+ I Y+
Sbjct: 457 RHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYN 516

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +++   CK  +I+EAL L  +M   G KPD   ++ +I   C   K+ +A+ L  +M  +
Sbjct: 517 IMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIE 576

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+  ++G I+ G C+ + I +A  Y + L+      + V+YN +I GY + GNI  A
Sbjct: 577 GVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGA 636

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + +   +    I P+ VT+ SL++  C  G V +A+ + +  + + +E   V YT  +  
Sbjct: 637 IGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQG 696

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+ G +   +   +EM +++I P  +TYT ++   CK    +EA +L ++M   G+ PD
Sbjct: 697 LCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPD 756

Query: 483 QITYNTIIRSFCKCKDLRKAFQ 504
            ++YNT++  F +   L KA +
Sbjct: 757 NVSYNTLVTGFSQVDSLDKAIE 778



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 165/645 (25%), Positives = 298/645 (46%), Gaps = 35/645 (5%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSET-PRNVYTNSIV 69
           DA  V++  +      S++T N+LL  L  T  +     ++D+++  +T   N Y+ + +
Sbjct: 179 DAFHVLSSRRA---SPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSM 235

Query: 70  IDGLCQQSRLQDAILFLQET--AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I  LC+  ++ D    L +   AG +     V  N +M   CK G  + A  L   M + 
Sbjct: 236 IKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEES 295

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            + P   ++ ILI+GL  +    E      +M   G+ P+ +  + L          + A
Sbjct: 296 RVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEA 355

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY-SVLLS 246
            ++  +++ K      VTY ++    C+ G +E   ++ E MLS G  ++   + SV+  
Sbjct: 356 IRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAG 415

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            + ++GR++  + L+ EM   G+KP+    +   + LC+  +  +A+ ++ +M  K +  
Sbjct: 416 LLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCI 475

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N     A++ GLCE + +  A     +++      D + YNIMI G  K   I EA++L 
Sbjct: 476 NIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLR 535

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             +I K   P    FNS+I+ +C  GK+ +A  LL  +K+ G++P  V+Y T ++ YC+ 
Sbjct: 536 DDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKA 595

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
            +IQ+    L E+    + P  V Y  +I G  +   +  A+ +L+ M  IG+ P  +TY
Sbjct: 596 KDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTY 655

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
            +++   C    + +A  +  Q   +++E     Y I+I GLC  G +  A      ++ 
Sbjct: 656 CSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRS 715

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPP 606
            +I   K+ YTT++ A+C  G+  +A   F +MV                    S+G  P
Sbjct: 716 RSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMV--------------------SSGIVP 755

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAA----VMIKSGLLPDKFLIN 647
           D      ++  F Q   L    E AA    +M ++  L D  L+N
Sbjct: 756 DNVSYNTLVTGFSQVDSLDKAIEKAAEISSIMTQNDCL-DNVLVN 799



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/530 (26%), Positives = 262/530 (49%), Gaps = 12/530 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL--------RHTDIMWDLYDDIKVSET 59
           + G V D   +++ +    L+   Q+  ++ YNL           D    L   ++ S  
Sbjct: 241 KVGKVDDGFKILSDLIHAGLQ---QSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRV 297

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             ++ T  I+I+GL +  R  +    L+E  G    P+ V  N ++  +C+ G    A  
Sbjct: 298 APSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIR 357

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE-PDAITYSILAKGF 178
           LF  M+   +   A +YN++   LC  G ME A     +M   G+     +  S++A   
Sbjct: 358 LFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLL 417

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               ++    ++I +++ +G  P+    T      CQ    +E + +   ML +G  +N+
Sbjct: 418 QRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINI 477

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
              + L+  +C+   +  A  +L  M   G++ D +TY+I+I+G CK  K+ +A++L ++
Sbjct: 478 ATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDD 537

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  K   P+++   +I+   C+   + EA      + +     DVV Y  +IDGY K  +
Sbjct: 538 MIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKD 597

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I +A +   +L+   + P+ V +N+LI G+ +NG ++ A  +LDT++  G++P+ VTY +
Sbjct: 598 IQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCS 657

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            M+  C  G +     + ++    +I    V YT++I+GLCK  K+ EA+   E+M    
Sbjct: 658 LMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRS 717

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           + P++ITY T++ ++CK  +  +A +L ++M    + P + +YN L+ G 
Sbjct: 718 IPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGF 767



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 221/443 (49%), Gaps = 10/443 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSE 58
           + R G   +A+ +  +M   ++K +  TYN +   L       R   I+ ++   +    
Sbjct: 346 HCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEM---LSTGM 402

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           T  +   NS+V   L +  RL+  +  + E   +   P+   + A   + C+    + A 
Sbjct: 403 TIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAV 462

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
           G++  ML+ GL  +  + N LIHGLC   +M+ A E    M   G+E D ITY+I+ +G 
Sbjct: 463 GIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGC 522

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
              S+I  A K+   ++ KG  PD   +  +I  YC +G +EE L L   M  +G + +V
Sbjct: 523 CKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDV 582

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           ++Y  ++   CK+  I +A   L E+ A GLKP+ V Y+ LI G  +   +  AI + + 
Sbjct: 583 VSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDT 642

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M S  I P +  + +++  +C   ++ EA+  F+    ++    VV Y IMI G  K+G 
Sbjct: 643 MESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGK 702

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EA+  + ++  + I P+ +T+ +L+Y +CK+G   +A +L D +   G+ P  V+Y T
Sbjct: 703 MDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNT 762

Query: 419 FMNAYCEEGNIQRLLALLQEMET 441
            +  + +  ++ + +    E+ +
Sbjct: 763 LVTGFSQVDSLDKAIEKAAEISS 785



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 121/268 (45%), Gaps = 39/268 (14%)

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFN---------------------------------- 382
           G++  AV  +  L  +R SPS+ T N                                  
Sbjct: 172 GSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYS 231

Query: 383 --SLIYGFCKNGKVADARRLLDTIKLHGLEPS--AVTYTTFMNAYCEEGNIQRLLALLQE 438
             S+I   CK GKV D  ++L  +   GL+ S  AV Y   M+A C+ G +   + L   
Sbjct: 232 YTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGR 291

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           ME   + P+ VT+ ++I GL +  +  E   LL +M  +G+TP+++  N +I   C+   
Sbjct: 292 MEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGH 351

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
             +A +L ++M    ++ T+ TYN++   LC  G+++ A+ +L  +    +++    + +
Sbjct: 352 FTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNS 411

Query: 559 IIKAHCAE-GDVHKAMTFFCQMVEKGFE 585
           ++       G +   +    +MV++G +
Sbjct: 412 VVAGLLQRTGRLESVVRLISEMVKRGMK 439


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 157/579 (27%), Positives = 272/579 (46%), Gaps = 36/579 (6%)

Query: 30  SIQTYNSL-LYNLRHT--DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDA-ILF 85
           +   YN L L  LR +  D++  LY D+ +S    +V+T ++++  LC   R++ A  +F
Sbjct: 109 TTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVF 168

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
               A  EF     S   +   YC+ G +  A  +   M    L       N ++ G C 
Sbjct: 169 DAMPARNEF-----SFGILARGYCRAGRSIDALKVLDGMPSMNL----VVCNTVVAGFCK 219

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG----SDP 201
            G +EEA      M   G+ P+ +T++          ++  A+++ Q +          P
Sbjct: 220 EGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRP 279

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D VT+ V++ G+C  G V+E   L ++M   GF   V +Y+  LS + ++GR+ EA  LL
Sbjct: 280 DQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELL 339

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            EM   G++P+  TY+I++ GLCK+ K   A ++ N + S  +SP+   + ++L   C K
Sbjct: 340 REMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSK 399

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             I  A    D +    C  +   YN+++    + G   EA +L  ++ EK  S      
Sbjct: 400 GNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGC 459

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N +I G C+N ++  A  ++D +   G         +F++   +    QR L        
Sbjct: 460 NIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCL-------- 511

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
               P  +TY+++I  LCK+ +  EA + L +M V  ++PD + Y+T I  +CK      
Sbjct: 512 ----PDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSL 567

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A ++L  M      P++ TYN+LI G       +    L+  ++E  IS   + Y ++IK
Sbjct: 568 AIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIK 627

Query: 562 AHCAEGDVHKAMTFFCQMVEK-------GFEISIRDYTK 593
           + C +G V+KAM    +M++         F++ I+ Y K
Sbjct: 628 SFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCK 666



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 152/581 (26%), Positives = 266/581 (45%), Gaps = 49/581 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + + G+V +A  ++ +M+   L  ++ T+N+                             
Sbjct: 217 FCKEGLVEEAERLVERMRVQGLAPNVVTFNAR---------------------------- 248

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGK-EFG---PSVVSLNAIMSRYCKLGFAEVAKGLF 121
               I  LC+  R+ DA    Q+     + G   P  V+ + ++S +C  GF + A+ L 
Sbjct: 249 ----ISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLV 304

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M   G      SYN  + GL   G + EA E   +M   G++P++ TY+I+  G    
Sbjct: 305 DIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKE 364

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A +V   +      PD+VTYT L+  YC  GN+    ++ + M  +G   N   Y
Sbjct: 365 GKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTY 424

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VLL S+ ++GR  EA  LL  M   G   D    +I+I GLC+  ++  A+ + + M  
Sbjct: 425 NVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGM-- 482

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
                  +  G+  LG      ++   +  DS I   C+ D + Y+I+I    K G   E
Sbjct: 483 -------WEEGSGALGRLGNSFLS---VVSDSSISQRCLPDQITYSILISALCKEGRFDE 532

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +   ++I K ISP  V +++ I+G+CK+GK + A ++L  ++  G  PS  TY   + 
Sbjct: 533 AKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIR 592

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            + E+   + ++ L+ EM+ K I P  +TY  +IK  C+Q  + +A+ LL++M    + P
Sbjct: 593 GFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVP 652

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +  +++ +I+++CK  D   A Q++    L         Y ++   L   G    A  +L
Sbjct: 653 NITSFDLLIKAYCKITDFPSA-QMVFDAALRTCGQKEVLYCLMCTELTTYGKWIEAKNIL 711

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
               E  +S+    Y  II   C  G+V  A +    ++ K
Sbjct: 712 EMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAK 752



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 244/554 (44%), Gaps = 50/554 (9%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P    YN LI        ++       D+   G +PD  T ++L +      ++  A +V
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRV 167

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              +  +       ++ +L  GYC+ G   + LK+ + M S    +N++  + +++  CK
Sbjct: 168 FDAMPARNE----FSFGILARGYCRAGRSIDALKVLDGMPS----MNLVVCNTVVAGFCK 219

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR----ISP 306
            G ++EA  L+  M   GL P++VT++  I  LCK  +V  A +++ +M          P
Sbjct: 220 EGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRP 279

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +      +L G C+   + EAR+  D +     ++ V  YN  + G V+ G +GEA +L 
Sbjct: 280 DQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELL 339

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           R++  + I P+  T+N ++ G CK GK  DARR+ + I+   + P  VTYT+ ++AYC +
Sbjct: 340 REMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSK 399

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           GNI     +L EM  K   P   TY V+++ L +  +  EA +LLE M   G + D    
Sbjct: 400 GNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGC 459

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMW-----------------------LHNLEPTSATYNI 523
           N II   C+   L  A  +++ MW                            P   TY+I
Sbjct: 460 NIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSI 519

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           LI  LC  G    A   L+ +   +IS   V Y T I  +C  G    A+     M +KG
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579

Query: 584 FEISIRDYT----------KSFFCM-----MLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
              S R Y           KS   M     M   G  P+      ++ +F Q G +    
Sbjct: 580 CNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAM 639

Query: 629 ELAAVMIKSGLLPD 642
            L   M+++ L+P+
Sbjct: 640 PLLDEMLQNELVPN 653



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/502 (22%), Positives = 211/502 (42%), Gaps = 67/502 (13%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVYT 65
            G V +A  ++  M+       +++YN  L  L R+  +    +L  ++       N YT
Sbjct: 294 AGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYT 353

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            +I++ GLC++ +  DA             P VV+  +++  YC  G    A  +   M 
Sbjct: 354 YNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMA 413

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G  P++F+YN+L+  L  AG   EA      M   G   D    +I+  G    S++ 
Sbjct: 414 QKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLD 473

Query: 186 GAWKVIQKLLIKGSD-----------------------PDIVTYTVLICGYCQIGNVEEG 222
            A  ++  +  +GS                        PD +TY++LI   C+ G  +E 
Sbjct: 474 VAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEA 533

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
            K    M+ +    + + Y   +   CK G+   A+ +L +ME  G  P   TY++LIRG
Sbjct: 534 KKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRG 593

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
             ++ K  + ++L +EM  K ISPN   + +++   C++ M+ +A    D ++ +  + +
Sbjct: 594 FEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPN 653

Query: 343 VVLYNIMIDGYVKL----------------------------------GNIGEAVQLYRQ 368
           +  ++++I  Y K+                                  G   EA  +   
Sbjct: 654 ITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCLMCTELTTYGKWIEAKNILEM 713

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI--KLHGLEPSAVTYTTFMNAYCEE 426
            +E R+S     +  +I G C+ G+V  A  LL  +  K H  +P+A  +   ++A  + 
Sbjct: 714 ALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAA--FMPVIDALGDR 771

Query: 427 G---NIQRLLALLQEMETKAIG 445
           G   ++  L A + EM  +  G
Sbjct: 772 GKKQDVDMLSAKMMEMADRNDG 793


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 220/445 (49%), Gaps = 36/445 (8%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           W  +++ K+ +   +VY+  IVI G C+   ++ +   L E     F P+VV    ++  
Sbjct: 149 WCFFNESKI-KVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDG 207

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
            CK G  E AK LF  M K+GL  + ++Y +LIHGL   G  ++  E    M  HGV P+
Sbjct: 208 CCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPN 267

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
             TY+ +        +   A+KV  ++  +G   +IVTY  LI G C+     E  ++ +
Sbjct: 268 LHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMD 327

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M S G   N+I Y+ L+   C   ++ +AL L  ++++ GL P LVTY+IL+ G CK+ 
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKG 387

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
               A ++  EM  + I P+                                    V Y 
Sbjct: 388 DTSGAGKVVKEMEERGIKPSK-----------------------------------VTYT 412

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           I+ID + +  N+ +A+QL   + E  ++P + T++ LI+GFC  G++ +A RL  ++   
Sbjct: 413 ILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEK 472

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
             EP+ V Y T +  YC+EG+  R L L +EME K + P   +Y  +I+ LCK+ K +EA
Sbjct: 473 KFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEA 532

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRS 492
             L+E M   G+ P     N I R+
Sbjct: 533 EGLVEKMIDSGIGPSDSILNLISRA 557



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 249/510 (48%), Gaps = 42/510 (8%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           + S+T   +Y   ++I+   Q   L  +I +  E   K F P     N +++    +G +
Sbjct: 88  ETSKTKSRLY--EVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFV--VGSS 143

Query: 115 EVAKGLFCLM--LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
              +  +C     K  +  D +S+ I+I G C AG +E++ +   ++   G  P+ + Y+
Sbjct: 144 SFNQ-WWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYT 202

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  G     +I  A  +  ++   G   +  TYTVLI G  + G  ++G ++ E M   
Sbjct: 203 TLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEH 262

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   N+  Y+ +++ +CK GR  +A  +  EM   G+  ++VTY+ LI GLC++ K ++A
Sbjct: 263 GVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEA 322

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            ++ ++M S  I+PN                                   ++ YN +IDG
Sbjct: 323 NEVMDQMKSDGINPN-----------------------------------LITYNTLIDG 347

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           +  +  +G+A+ L R L  + +SPS+VT+N L+ GFCK G  + A +++  ++  G++PS
Sbjct: 348 FCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPS 407

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            VTYT  ++ +    N+++ + L   ME   + P   TY+V+I G C + ++ EA +L +
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFK 467

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            M      P+++ YNT++  +CK     +A +L  +M    L P  A+Y  +I+ LC   
Sbjct: 468 SMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKER 527

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
             K A+ L+  + +  I  +      I +A
Sbjct: 528 KSKEAEGLVEKMIDSGIGPSDSILNLISRA 557



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 220/448 (49%), Gaps = 1/448 (0%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           Y ++I+    + S++ ++ + N+M   G  P +  ++ L       S  +  W    +  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
           IK    D+ ++ ++I G C+ G +E+   L   +   GF  NV+ Y+ L+   CK G I+
Sbjct: 157 IK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           +A  L +EM   GL  +  TY++LI GL K     +  ++Y +M    + PN   +  ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
             LC+     +A   FD +       ++V YN +I G  +     EA ++  Q+    I+
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+++T+N+LI GFC   K+  A  L   +K  GL PS VTY   ++ +C++G+      +
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           ++EME + I P+ VTYT++I    +   +++A+QL   M  +G+TPD  TY+ +I  FC 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              + +A +L   M     EP    YN ++ G C  G    A  L   ++E  +     +
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           Y  +I+  C E    +A     +M++ G
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMIDSG 543



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 196/452 (43%), Gaps = 51/452 (11%)

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y V+I  Y Q  +++  +     M+ +GF      ++ LL+ +  S   ++      E +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
            + +  D+ ++ I+I+G C+  ++ K+  L  E+     SPN                  
Sbjct: 157 -IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPN------------------ 197

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
                            VV+Y  +IDG  K G I +A  L+ ++ +  +  +  T+  LI
Sbjct: 198 -----------------VVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLI 240

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
           +G  KNG       + + ++ HG+ P+  TY   MN  C++G  +    +  EM  + + 
Sbjct: 241 HGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVS 300

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
              VTY  +I GLC++ K  EA ++++ M   G+ P+ ITYNT+I  FC  + L KA  L
Sbjct: 301 CNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSL 360

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
              +    L P+  TYNIL+ G C  GD   A  ++  ++E  I  +KV YT +I     
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFAR 420

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEI 610
             ++ KA+     M E G    +  Y+                  F  M+   F P++ I
Sbjct: 421 SDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVI 480

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              M++ + + G       L   M +  L P+
Sbjct: 481 YNTMVLGYCKEGSSYRALRLFREMEEKELPPN 512



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 140/278 (50%), Gaps = 3/278 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G   DA  V  +M+E  +  +I TYN+L+  L      +   ++ D +K      N+ 
Sbjct: 280 KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLI 339

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +IDG C   +L  A+   ++   +   PS+V+ N ++S +CK G    A  +   M
Sbjct: 340 TYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G+ P   +Y ILI     + +ME+A++  + M   G+ PD  TYS+L  GF +  ++
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRM 459

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A ++ + ++ K  +P+ V Y  ++ GYC+ G+    L+L   M  +    NV +Y  +
Sbjct: 460 NEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYM 519

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           +  +CK  +  EA GL+ +M   G+ P     +++ R 
Sbjct: 520 IEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRA 557



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 160/365 (43%), Gaps = 39/365 (10%)

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMI-TEARMY---FDSLIMSNCIQDVVLY-NIMID- 351
           ++ S +I    F   ++L  L E E   T++R+Y    ++ + S  +   + Y N M+D 
Sbjct: 64  QVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDK 123

Query: 352 GYVKLGN---------IGEAV--QLYRQLIEKRISP--SIVTFNSLIYGFCKNGKVADAR 398
           G+V   N         +G +   Q +    E +I     + +F  +I G C+ G++  + 
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSF 183

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            LL  ++  G  P+ V YTT ++  C++G I++   L  EM    +     TYTV+I GL
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGL 243

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
            K    ++  ++ E M   GV P+  TYN ++   CK    + AF++ ++M    +    
Sbjct: 244 FKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNI 303

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TYN LI GLC       A+ ++  ++   I+   + Y T+I   C    + KA++    
Sbjct: 304 VTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSL--- 360

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
                     RD        + S G  P      +++  F + GD     ++   M + G
Sbjct: 361 ---------CRD--------LKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403

Query: 639 LLPDK 643
           + P K
Sbjct: 404 IKPSK 408



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 3/175 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRN 62
           + + G    A  V+ +M+E  +K S  TY  L+     +D M     L   ++      +
Sbjct: 383 FCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPD 442

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+T S++I G C + R+ +A    +    K+F P+ V  N ++  YCK G +  A  LF 
Sbjct: 443 VHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFR 502

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
            M +  L P+  SY  +I  LC     +EA      M   G+ P     +++++ 
Sbjct: 503 EMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRA 557


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 243/483 (50%), Gaps = 36/483 (7%)

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
           LN ++     LGF + A+ +F  ML   + PD+ SY +++ G C  G + +   +  DM 
Sbjct: 196 LNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMI 255

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
             G   D  T +++   F     ++ A+   +K +  G +P+++ ++ LI G C+IG+++
Sbjct: 256 ERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIK 315

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSIL 279
           +  ++ E M+ +G+K NV  ++ L+  +CK G  ++A  L  ++  +   KP++ TY+ +
Sbjct: 316 QAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCM 375

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I G CK++K+++A  L   M  + + PN+                               
Sbjct: 376 INGYCKEEKLNRAEMLLIRMKEQGLVPNTNT----------------------------- 406

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
                 Y  +IDG+ K GN G A +L   + ++  +P+I T+N++I G CK G+  +A +
Sbjct: 407 ------YTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYK 460

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           LL      GL    VTYT  ++ +C + + ++ LA+   M    + P   TY V+I   C
Sbjct: 461 LLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFC 520

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           +Q K++E+ +L E+   +G+ P + TY ++I  +C+   +  A +  ++M  +  +P S 
Sbjct: 521 RQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSI 580

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TY  LI GLC    L  A  L  ++ ++ +S  +V   T+   +C +GD   AM    ++
Sbjct: 581 TYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERL 640

Query: 580 VEK 582
            +K
Sbjct: 641 EKK 643



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 218/438 (49%), Gaps = 1/438 (0%)

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G ++EA+    +M  HG+   A   + +      L  +  A KV  ++L +   PD  +Y
Sbjct: 172 GKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSY 231

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            +++ GYC++G + +  +  + M+ +G+ ++    ++++S+  + G ++ A     +   
Sbjct: 232 KLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQ 291

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           +GL P+L+ +S LI GLCK   + +A ++  EM  K   PN + H A++ GLC+K    +
Sbjct: 292 MGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEK 351

Query: 327 ARMYFDSLIMS-NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           A   F  L+ S N   +V  Y  MI+GY K   +  A  L  ++ E+ + P+  T+  LI
Sbjct: 352 AFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLI 411

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G CK G    A  L+D +   G  P+  TY   ++  C++G       LL+      + 
Sbjct: 412 DGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLH 471

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
              VTYT++I   C+Q   ++A+ +   M+ +G+ PD  TYN +I +FC+ K + ++ +L
Sbjct: 472 ADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKL 531

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
             +     L PT  TY  +I G C +G + +A      ++++      + Y  +I   C 
Sbjct: 532 FEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCN 591

Query: 566 EGDVHKAMTFFCQMVEKG 583
           E  + +A   +  M++ G
Sbjct: 592 ESKLDEACQLYETMIDNG 609



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 240/519 (46%), Gaps = 42/519 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           +S  G + +AV ++ +M+   L +  +  N ++     L   D    ++D++       +
Sbjct: 168 FSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPD 227

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +  +++ G C+  R+ D   +L++   + +     +   ++S + + GF   A   F 
Sbjct: 228 STSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFK 287

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             ++ GL+P+  +++ LI+GLC  GS+++A E   +M R G +P+  T++ L  G     
Sbjct: 288 KWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKG 347

Query: 183 QISGAWKVIQK--------------------------------LLIK----GSDPDIVTY 206
               A+++  K                                LLI+    G  P+  TY
Sbjct: 348 WTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTY 407

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           T LI G+C+ GN     +L ++M  +GF  N+  Y+ ++  +CK GR  EA  LL     
Sbjct: 408 TCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLK 467

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            GL  D VTY+ILI   C+Q    +A+ +++ M    + P+   +  ++   C ++ + E
Sbjct: 468 SGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEE 527

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           +   F+  +    +     Y  MI GY + G+I  A++ + ++ +    P  +T+ +LI 
Sbjct: 528 SEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALIS 587

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G C   K+ +A +L +T+  +GL P  VT  T    YC++G+    + +L+ +E K    
Sbjct: 588 GLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIR 647

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           T  T   +I+ LC + K+  A      +    +  D+IT
Sbjct: 648 TVNT---LIRKLCSEKKVGVAALFFHKLLDKDLNVDRIT 683



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/469 (23%), Positives = 200/469 (42%), Gaps = 56/469 (11%)

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           ++  + +IG ++E + +   M + G  L     + ++      G +D A  +  EM    
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           + PD  +Y +++ G C+  ++    +   +M  +  + ++     ++    EK  +  A 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
            YF   +      +++ ++ +I+G  K+G+I +A ++  +++ K   P++ T  +LI G 
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 389 CKNGKVADARRL-LDTIKLHGLEPSAVTYTTFMNAYCEE--------------------- 426
           CK G    A RL L  ++    +P+  TYT  +N YC+E                     
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 427 --------------GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
                         GN  R   L+  M  +   P   TY  +I GLCK+ +  EA +LL 
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
                G+  D++TY  +I  FC+  D ++A  + ++M+   L+P   TYN+LI   C   
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            ++ ++ L        +  TK  YT++I  +C +G +  A+ FF +M         RDY 
Sbjct: 524 KVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKM---------RDY- 573

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                     G  PD      ++        L    +L   MI +GL P
Sbjct: 574 ----------GCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSP 612



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 195/442 (44%), Gaps = 43/442 (9%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR-NV 63
           + G +  A  ++ +M     K ++ T+ +L+  L     T+  + L+  +  S+  + NV
Sbjct: 310 KIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 369

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           YT + +I+G C++ +L  A + L     +   P+  +   ++  +CK G    A  L  L
Sbjct: 370 YTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDL 429

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M K G  P+ F+YN +I GLC  G   EA +      + G+  D +TY+IL   F   + 
Sbjct: 430 MGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTD 489

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A  +  ++   G  PD+ TY VLI  +C+   VEE  KL E  +  G       Y+ 
Sbjct: 490 NKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTS 549

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++   C+ G I  A+   ++M   G KPD +TY  LI GLC + K+ +A QLY  M    
Sbjct: 550 MICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNG 609

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           +SP            CE   +T   + ++                    Y K G+   A+
Sbjct: 610 LSP------------CE---VTRVTLAYE--------------------YCKQGDSATAM 634

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +  +L EK++   I T N+LI   C   KV  A      +    L    +T   F  A 
Sbjct: 635 IILERL-EKKL--WIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTA- 690

Query: 424 CEEGNIQRLLALLQEMETKAIG 445
           C E N   L++ L E  +K IG
Sbjct: 691 CYESNKFALVSDLSERISKGIG 712



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 129/303 (42%), Gaps = 58/303 (19%)

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N +ID  + LG +  A +++ +++++ + P   ++  ++ G+C+ G+++D  R L  +  
Sbjct: 197 NFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIE 256

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G      T T  ++ + E+G + R                              W  ++
Sbjct: 257 RGYAVDNATCTLMISTFSEKGFVNRAF----------------------------WYFKK 288

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
            VQ+       G+ P+ I ++++I   CK   +++AF++L +M     +P   T+  LID
Sbjct: 289 WVQM-------GLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALID 341

Query: 527 GLCVNGDLKNADCLLVSL-QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           GLC  G  + A  L + L +  N       YT +I  +C E  +++A     +M E+G  
Sbjct: 342 GLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLV 401

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH-QGGDLGSVFELAAVMIKSGLLPDKF 644
            +   YT                      LI  H + G+ G  +EL  +M K G  P+ F
Sbjct: 402 PNTNTYT---------------------CLIDGHCKAGNFGRAYELMDLMGKEGFTPNIF 440

Query: 645 LIN 647
             N
Sbjct: 441 TYN 443


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 153/644 (23%), Positives = 294/644 (45%), Gaps = 27/644 (4%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLY----NLRHTDIMWDLYDDIKVSETPRNVY 64
            G    A  ++ KMK   +  S+ TYN++L+      R    +  L +D++      +VY
Sbjct: 239 NGEFRKAEDMLQKMKSCHISNSV-TYNTILHWYVKKGRFKAALCVL-EDMERDSVQADVY 296

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I+ID LC+  R   A L L+     +  P   + N +++ + + G    A+ +F  M
Sbjct: 297 TYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHM 356

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L+  L P   +Y  +I G C    +++AL   ++M   GV P  +TYS L  G+  +S +
Sbjct: 357 LRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSML 416

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +++ L  +G   +    T+LI G+CQ+G + +  ++ + M   G   +VI YS L
Sbjct: 417 GPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSAL 476

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++ MC+  ++ E   +L  M+  G+ P+ V Y+ LI   CK   V +A++ + ++  + +
Sbjct: 477 INGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGL 536

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             N   H A+L     + MITEA  +   +   N   D V +N +ID Y   GNI  A  
Sbjct: 537 VANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFS 596

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +Y  ++    SP++ T+ +L+ G C+ G +  AR+ +  +          T+   +   C
Sbjct: 597 VYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGIC 656

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             G +   L L ++M      P   TYT+++ G C++ K+  A+ +L+ M   GV PD +
Sbjct: 657 RYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTV 716

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWL-HNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            Y  ++        ++ A  + +++     L      YN L++G   + ++     ++  
Sbjct: 717 AYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSD 776

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           + ++ +     +Y  ++  +   G   K++  +  MV KG                    
Sbjct: 777 MYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIR------------------ 818

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             PD     ++++   + G +    +    M+  G+ PD+ + +
Sbjct: 819 --PDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFD 860



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/584 (25%), Positives = 277/584 (47%), Gaps = 6/584 (1%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
            Y + G V +A+     +    L  +   +N+LL+      ++ +  +  +   +  N+  
Sbjct: 515  YCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEA-EHFRQYMSRMNISF 573

Query: 66   NSI----VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            +S+    +ID  C +  +  A     +     + P+V +   ++   C+ G    A+   
Sbjct: 574  DSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFM 633

Query: 122  CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              +L      D  ++N L+ G+C  G+++EAL+    M ++   PD  TY+IL  GF   
Sbjct: 634  SCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRK 693

Query: 182  SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG-LKLREVMLSQGFKLNVIA 240
             +I  A  ++Q +L KG  PD V YT L+ G    G V+       E++  +G   + IA
Sbjct: 694  GKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIA 753

Query: 241  YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
            Y+ L++   KS  ++    ++ +M    + P+  +Y+IL+ G  K+ +  K++ LY  M 
Sbjct: 754  YNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMV 813

Query: 301  SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
             K I P++  +  ++LGL E  +I  A  + + +++     D ++++I+I  + +   + 
Sbjct: 814  RKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMH 873

Query: 361  EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
             A+Q++  +    +SPS  TF+++I G  + G +  + ++L  +   GL+P+   Y   +
Sbjct: 874  NALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALV 933

Query: 421  NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
            NA C  G I R   L +EM+   I P  V  + +I+GLC+  KL+EAV +   M   G+ 
Sbjct: 934  NAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMV 993

Query: 481  PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            P   T+ T++ S CK   +  A  L   M L  L     +YN+LI GLC +  + +A  L
Sbjct: 994  PTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDL 1053

Query: 541  LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
               ++   +      Y T+  A  + G V         + E+G 
Sbjct: 1054 YGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGL 1097



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 160/661 (24%), Positives = 289/661 (43%), Gaps = 20/661 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +L   Y +   V DA   +  M +   K S  + N++L  L     +  +W    +    
Sbjct: 161 LLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFLRESLAR 220

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           + P  V T +I+++ LC     + A   LQ+        SV + N I+  Y K G  + A
Sbjct: 221 KFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHISNSV-TYNTILHWYVKKGRFKAA 279

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             +   M +  +  D ++YNI+I  LC       A      M +  + PD  TY+ L  G
Sbjct: 280 LCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLING 339

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    +I+ A  V   +L +   P + TYT +I GYC+   +++ L +   M   G   +
Sbjct: 340 FFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPS 399

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + YS LL+  CK   +  A+ L+ ++++ G+  +    +ILI G C+  ++ KA Q+  
Sbjct: 400 ELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILK 459

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            M    I P+   + A++ G+C    + E +     +  S  + + VLY  +I  Y K G
Sbjct: 460 SMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAG 519

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EA++ +  +  + +  + V  N+L++ F + G + +A      +    +   +V++ 
Sbjct: 520 YVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFN 579

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +++YC  GNI    ++  +M      P   TY  +++GLC+   L +A Q +  +  I
Sbjct: 580 RIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDI 639

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
               D+ T+N ++   C+   L +A  L  +M  +N  P   TY IL+ G C  G +  A
Sbjct: 640 PFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPA 699

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK--------GFEISIR 589
             +L  + E  +    VAYT ++     EG V  A   F +++ K         +   + 
Sbjct: 700 LVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMN 759

Query: 590 DYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            Y KS            M  N   P+     +++  + + G       L   M++ G+ P
Sbjct: 760 GYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRP 819

Query: 642 D 642
           D
Sbjct: 820 D 820



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/601 (23%), Positives = 267/601 (44%), Gaps = 71/601 (11%)

Query: 62   NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            +V T S +I+G+C+ +++ +    L         P+ V    ++  YCK G+ + A   F
Sbjct: 469  DVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHF 528

Query: 122  CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              + + GL  +   +N L+H     G + EA  F   M R  +  D+++++ +   +   
Sbjct: 529  VDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHR 588

Query: 182  SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
              I GA+ V   ++  G  P++ TY  L+ G CQ G++ +  +    +L   F ++   +
Sbjct: 589  GNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTF 648

Query: 242  SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            + LL  +C+ G +DEAL L  +M      PD+ TY+IL+ G C++ K+  A+ +   M  
Sbjct: 649  NALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLE 708

Query: 302  KRISPNSFAHGAILLGLCEKEMITEARMYFDSLI-------------------------- 335
            K + P++ A+  +L GL  +  +  A   F  +I                          
Sbjct: 709  KGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVN 768

Query: 336  -----MSNCIQDVVL-----YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
                 MS+  Q+ V      YNI++ GYVK G   +++ LY+ ++ K I P  VT+  LI
Sbjct: 769  TIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLI 828

Query: 386  YG-----------------------------------FCKNGKVADARRLLDTIKLHGLE 410
             G                                   F +  K+ +A ++ + +K   + 
Sbjct: 829  LGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMS 888

Query: 411  PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
            PS+ T++  +N    +G +     +L EM    + P H  Y  ++   C+  ++  A +L
Sbjct: 889  PSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRL 948

Query: 471  LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
             E+M  IG+ P ++  ++IIR  C+C  L +A  + + M    + PT AT+  L+  LC 
Sbjct: 949  KEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCK 1008

Query: 531  NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
               + +A  L   ++   + +  V+Y  +I   C +  +  A+  + +M  KG   +I  
Sbjct: 1009 ESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITT 1068

Query: 591  Y 591
            Y
Sbjct: 1069 Y 1069



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 250/556 (44%), Gaps = 41/556 (7%)

Query: 2    LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDD-IKVS 57
            L   + R GM+ +A      M  +++     ++N ++ +  H   +   + +YDD ++  
Sbjct: 546  LLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYG 605

Query: 58   ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
             +P NV T   ++ GLCQ   L  A  F+       F     + NA++   C+ G  + A
Sbjct: 606  YSP-NVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEA 664

Query: 118  KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              L   M+K    PD  +Y IL+ G C  G +  AL     M   GV PD + Y+ L  G
Sbjct: 665  LDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNG 724

Query: 178  FHLLSQISGAWKVIQKLLIKG-----------------------------SD-------P 201
                 Q+  A  V  +++ K                              SD       P
Sbjct: 725  LINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYP 784

Query: 202  DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
            +  +Y +L+ GY + G   + L L + M+ +G + + + Y +L+  + + G ID A+  L
Sbjct: 785  NSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFL 844

Query: 262  YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
             +M   G+ PD + + ILI    ++ K+H A+Q++N M    +SP+S    A++ GL  K
Sbjct: 845  EKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRK 904

Query: 322  EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
              +  +      ++      +   Y  +++   ++G I  A +L  ++    I P+ V  
Sbjct: 905  GYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAE 964

Query: 382  NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
            +S+I G C+ GK+ +A  +  ++   G+ P+  T+TT M++ C+E  I   L L + ME 
Sbjct: 965  SSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMEL 1024

Query: 442  KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
              +    V+Y V+I GLCK   + +A+ L  +M   G+ P+  TY T+  +      ++ 
Sbjct: 1025 CRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQN 1084

Query: 502  AFQLLNQMWLHNLEPT 517
              +LL  +    L P 
Sbjct: 1085 GEELLEDIEERGLIPA 1100



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 218/465 (46%), Gaps = 41/465 (8%)

Query: 25   LDLKVSI--QTYNSLLYNL-RH--TDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRL 79
            LD+  +I  +T+N+LL  + R+   D   DL + +  +    +++T +I++ G C++ ++
Sbjct: 637  LDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKI 696

Query: 80   QDAILFLQETAGKEFGPSVVSL------------------------------------NA 103
              A++ LQ    K   P  V+                                     N+
Sbjct: 697  LPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNS 756

Query: 104  IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
            +M+ Y K       K +   M +  ++P++ SYNIL+HG    G   ++L     M R G
Sbjct: 757  LMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKG 816

Query: 164  VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
            + PD +TY +L  G      I  A K ++K++++G  PD + + +LI  + +   +   L
Sbjct: 817  IRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNAL 876

Query: 224  KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
            ++   M       +   +S +++ + + G +D +  +L+EM  VGL+P+   Y  L+   
Sbjct: 877  QVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAK 936

Query: 284  CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
            C+  ++ +A +L  EM +  I P   A  +I+ GLC    + EA + F S++ S  +  V
Sbjct: 937  CRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTV 996

Query: 344  VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
              +  ++    K   I +A+ L R +   R+   +V++N LI G CK+  ++DA  L   
Sbjct: 997  ATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGE 1056

Query: 404  IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            +K  GL P+  TY T   A    G +Q    LL+++E + + P +
Sbjct: 1057 MKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIPAY 1101



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/212 (20%), Positives = 89/212 (41%), Gaps = 17/212 (8%)

Query: 446 PT-HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
           PT HV + +++K   K+ K+ +A   +  M   G     ++ NTI+ +  +  + +  + 
Sbjct: 153 PTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWL 212

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
            L +           T NIL++ LC NG+ + A+ +L  ++  +IS   V Y TI+  + 
Sbjct: 213 FLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYV 271

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDY-------------TKSFFCM--MLSNGFPPDQE 609
            +G    A+     M     +  +  Y             T++F  +  M  +   PD+ 
Sbjct: 272 KKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDEC 331

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
               ++  F + G +     +   M++  L+P
Sbjct: 332 TYNTLINGFFREGKINHARYVFNHMLRQNLVP 363


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 228/450 (50%), Gaps = 15/450 (3%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPS--VVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           +I+I  LC   R+ DA     E   +  GPS  +++ N +++ YC+ G  + A+ +   +
Sbjct: 100 NILIKKLCADGRVADA-----ERVVEALGPSATIITYNTMVNGYCRAGNIDAARRM---I 151

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
                 PD F+YN LI  LC+ G + +AL   +DM   G  P  +TYSIL       S  
Sbjct: 152 DSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGY 211

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  ++ ++  KG +PDIVTY VLI   C  G+V E LK+   + S G K + + Y+ +
Sbjct: 212 KQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPV 271

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L S+C S R +EA  LL +M +    PD VT++ +I  LC++  V +A ++  +M     
Sbjct: 272 LKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGC 331

Query: 305 SPNSFAHGAILLGLCEKEMITEA----RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +P+   + +I+ GLC++  + EA    +     ++  NCI D V +N +I    + G   
Sbjct: 332 TPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFD 391

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGF-CKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            A+++  ++ E    P I T+N ++ GF CK+ K  +A  LL+ +  +GL P   TY + 
Sbjct: 392 RAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSL 451

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
                 E  ++R + + + ++   + P  + Y  ++ GLCK+W+   A+     M   G 
Sbjct: 452 AFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGC 511

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            PD+ TY  ++        L +A +LL  +
Sbjct: 512 MPDESTYIILVEGIAYEGFLEEAKELLGNL 541



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 242/481 (50%), Gaps = 15/481 (3%)

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           GL Q+  L  A+  +   +G    P+V+  N ++ + C  G    A+ +        L P
Sbjct: 70  GLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVV-----EALGP 124

Query: 132 DA--FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            A   +YN +++G C AG+++ A    + +      PD  TY+ L +   +   +  A  
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLDALA 181

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           V   +L +G  P +VTY++L+   C+    ++ + L + M S+G + +++ Y+VL+++MC
Sbjct: 182 VFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMC 241

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
             G + EAL +L  + + G KPD VTY+ +++ LC  ++  +A +L  +M S   +P+  
Sbjct: 242 SQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEV 301

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
              A++  LC+K  +  A      +    C  D++ Y+ ++DG  K   + EA++L ++L
Sbjct: 302 TFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKEL 361

Query: 370 IEKRIS----PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY-C 424
           + + +S    P  VTFN++I   C+ G    A +++D +  HG  P   TY   ++ + C
Sbjct: 362 LAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLC 421

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +    +  L LL  M +  + P   TY  +  GL ++ +++ A+ +   +  +G++PD++
Sbjct: 422 KSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKM 481

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            YN I+   CK      A      M  +   P  +TY IL++G+   G L+ A  LL +L
Sbjct: 482 LYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNL 541

Query: 545 Q 545
            
Sbjct: 542 S 542



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 219/452 (48%), Gaps = 11/452 (2%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N  + GL   G ++ AL   + +   G +P  I  +IL K      +++ A +V++ L  
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL-- 122

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
            G    I+TY  ++ GYC+ GN++     R ++ S  F  +   Y+ L+ ++C  G + +
Sbjct: 123 -GPSATIITYNTMVNGYCRAGNIDAA---RRMIDSVPFAPDTFTYNPLIRALCVRGCVLD 178

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           AL +  +M   G  P +VTYSIL+   CK+    +A+ L +EM SK   P+   +  ++ 
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
            +C +  + EA    +SL    C  D V Y  ++          EA +L  ++     +P
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
             VTFN++I   C+ G V  A ++L  +  HG  P  +TY++ M+  C+E  +   + LL
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358

Query: 437 QE----METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           +E    M +K   P  VT+  +I  LC++     A++++++M   G  PD  TYN I+  
Sbjct: 359 KELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDG 418

Query: 493 F-CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
           F CK     +A  LLN M  + L P + TY  L  GL    +++ A  +   +Q   +S 
Sbjct: 419 FLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSP 478

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            K+ Y  I+   C +     A+ FF  MV  G
Sbjct: 479 DKMLYNAILLGLCKKWRTDLAIDFFAYMVSNG 510



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 194/417 (46%), Gaps = 8/417 (1%)

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T + +++G C+   +  A   +       F P   + N ++   C  G    A  +F 
Sbjct: 128 IITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLDALAVFD 184

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML  G  P   +Y+IL+   C     ++A+   ++M   G EPD +TY++L        
Sbjct: 185 DMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQG 244

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A KV+  L   G  PD VTYT ++   C     EE  KL   M S     + + ++
Sbjct: 245 DVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFN 304

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN----E 298
            +++S+C+ G +  A  +L +M   G  PD++TYS ++ GLCK+ +V +AI+L      E
Sbjct: 305 AVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAE 364

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV-KLG 357
           M SK   P+      I+  LC+K +   A    D +    CI D+  YN ++DG++ K  
Sbjct: 365 MVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSC 424

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
              EA+ L   ++   + P   T+ SL +G  +  ++  A  +   ++  GL P  + Y 
Sbjct: 425 KTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYN 484

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
             +   C++      +     M +    P   TY ++++G+  +  L+EA +LL ++
Sbjct: 485 AILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNL 541



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 208/452 (46%), Gaps = 26/452 (5%)

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           G  Q G ++  L+L   +   G    VI  ++L+  +C  GR+ +A  ++   EA+G   
Sbjct: 70  GLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVV---EALGPSA 126

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
            ++TY+ ++ G C+   +  A ++ +   S   +P++F +  ++  LC +  + +A   F
Sbjct: 127 TIITYNTMVNGYCRAGNIDAARRMID---SVPFAPDTFTYNPLIRALCVRGCVLDALAVF 183

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           D ++   C   VV Y+I++D   K     +AV L  ++  K   P IVT+N LI   C  
Sbjct: 184 DDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQ 243

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G V +A ++L+++  +G +P AVTYT  + + C     +    LL +M +    P  VT+
Sbjct: 244 GDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTF 303

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ--- 508
             VI  LC++  +  A ++L  M   G TPD ITY++I+   CK + + +A +LL +   
Sbjct: 304 NAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLA 363

Query: 509 -MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH-CAE 566
            M   N  P   T+N +I  LC  G    A  ++  + EH        Y  I+    C  
Sbjct: 364 EMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKS 423

Query: 567 GDVHKAMTFFCQMVEKG------------FEISIRDYTK---SFFCMMLSNGFPPDQEIC 611
               +A+     MV  G            F +S  D  +     F  + + G  PD+ + 
Sbjct: 424 CKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLY 483

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
             +L+   +        +  A M+ +G +PD+
Sbjct: 484 NAILLGLCKKWRTDLAIDFFAYMVSNGCMPDE 515



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 171/364 (46%), Gaps = 24/364 (6%)

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           +RGL ++ ++  A++L + +      P       ++  LC    + +A    ++L  S  
Sbjct: 68  LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGPSAT 127

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADAR 398
           I   + YN M++GY + GNI  A    R++I+    +P   T+N LI   C  G V DA 
Sbjct: 128 I---ITYNTMVNGYCRAGNIDAA----RRMIDSVPFAPDTFTYNPLIRALCVRGCVLDAL 180

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            + D +   G  PS VTY+  ++A C+E   ++ + LL EM +K   P  VTY V+I  +
Sbjct: 181 AVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAM 240

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           C Q  + EA+++L  +   G  PD +TY  +++S C  +   +A +LL +M+ ++  P  
Sbjct: 241 CSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDE 300

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            T+N +I  LC  G +  A  +L  + EH  +   + Y++I+   C E  V +A+     
Sbjct: 301 VTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL-- 358

Query: 579 MVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
                         K     M+S    PDQ     ++ +  Q G      ++   M + G
Sbjct: 359 --------------KELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHG 404

Query: 639 LLPD 642
            +PD
Sbjct: 405 CIPD 408


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 156/645 (24%), Positives = 287/645 (44%), Gaps = 65/645 (10%)

Query: 5   VYSRTGMVHDAV----FVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
            Y+ +G +  AV    +V+     +   ++     SL+   R  +    +YD++      
Sbjct: 143 AYAESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGC 202

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            + Y+  I++ G+C + ++++    +++  GK   P++V  N I+  YCKLG  E AK +
Sbjct: 203 VDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLV 262

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP-----DAITYSILA 175
           F  +   G  P   ++  +I+G C  G    +     ++   G+       + I  +   
Sbjct: 263 FKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYR 322

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            GF +    S  W     ++     PDI TY +LI   C+ G  E    L +    +G  
Sbjct: 323 HGFKVDPAESIRW-----IVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLI 377

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           L  ++Y+ L+ + CKS   D A  LL ++   G KPD+VTY ILI GL     +  A+ +
Sbjct: 378 LTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
             ++  + +SP++  +  ++ GLC+      A++ F  ++  + + D  +Y  +IDG+++
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIR 497

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G+  EA +++   +EK +   +V  N++I GFC++G + +A   ++ +    L P   T
Sbjct: 498 SGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y+T ++ Y ++ ++   + + ++ME     P  VTYT +I G C Q     A +  ++M 
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQ 617

Query: 476 VIGVTPDQITYNTIIRSFCK-CKDLRKAFQLLNQMWLHNLEPTSATYNILIDG------- 527
              + P+ +TY T+IRSF K    L KA      M  +   P   T+N L+ G       
Sbjct: 618 SRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSG 677

Query: 528 ------------------------------------------LCVNGDLKNADCLLVSLQ 545
                                                     LCV+G +K A  L   + 
Sbjct: 678 RFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMV 737

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTF-FCQMVEKGFEISIR 589
           +   S   V++  I+   C  G+  +     F  + EKG E+++R
Sbjct: 738 KKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFRNLDEKGLEVAVR 782



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 150/578 (25%), Positives = 261/578 (45%), Gaps = 32/578 (5%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V++ NA++S   K    E A+ ++  M + G   D +S  I++ G+C  G +EE  + 
Sbjct: 168 PDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKL 227

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             D    G  P+ + Y+ +  G+  L  I  A  V ++L +KG  P + T+  +I G+C+
Sbjct: 228 IEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCK 287

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG-RIDEALGLLYEMEAVGLKPDLV 274
            G+     +L E +  +G ++ V   + ++ +  + G ++D A  + + + A   KPD+ 
Sbjct: 288 KGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRW-IVANDCKPDIA 346

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+ILI  LCK+ K   A  L +E   K +   + ++  ++   C+ +    A      L
Sbjct: 347 TYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQL 406

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
               C  D+V Y I+I G V  G++ +AV +  +LI++ +SP    +N L+ G CK G+ 
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
             A+ L   +    + P A  Y T ++ +   G+      +      K +    V +  +
Sbjct: 467 LPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAM 526

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           IKG C+   L EA+  +  M    + PD+ TY+TII  + K +D+  A ++   M  +  
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKC 586

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD-VHKA- 572
           +P   TY  LI+G C  GD   A+     +Q  ++    V YTT+I++   E   + KA 
Sbjct: 587 KPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAV 646

Query: 573 ------MTFFCQMVEKGFEISIRDYTK----------------------SFFCMMLSNGF 604
                 MT  C   E  F   ++ + K                       FF  M S+G+
Sbjct: 647 YYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGW 706

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                    +L+     G + +   L   M+K G  PD
Sbjct: 707 SDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPD 744



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 202/435 (46%), Gaps = 22/435 (5%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL-YEMEAVGLKPDLVTYSILIRGLCKQD 287
           + ++  KL   A S +L +  +SG + +A+ +  Y +E     PD++  + L+  + K  
Sbjct: 125 LRNENVKLTHEALSHVLHAYAESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSR 184

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           ++  A ++Y+EMC +    ++++   ++ G+C +  + E R   +      C+ ++V YN
Sbjct: 185 RLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYN 244

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I GY KLG+I  A  ++++L  K   P++ TF ++I GFCK G    + RLL+ +K  
Sbjct: 245 TIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKER 304

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           GL          ++A    G        ++ +      P   TY ++I  LCK+ K + A
Sbjct: 305 GLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVA 364

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
             LL++    G+    ++Y  +I+++CK K+   A +LL Q+     +P   TY ILI G
Sbjct: 365 AGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHG 424

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK----- 582
           L V+G + +A  + V L +  +S     Y  ++   C  G    A   F +M+++     
Sbjct: 425 LVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPD 484

Query: 583 ---------GFEISIR----DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
                    GF   IR    D  +  F + +  G   D      M+  F + G L     
Sbjct: 485 AYVYATLIDGF---IRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALA 541

Query: 630 LAAVMIKSGLLPDKF 644
               M +  L+PDKF
Sbjct: 542 CMNRMNEEHLVPDKF 556



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 165/364 (45%), Gaps = 28/364 (7%)

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +++  + +H  +L    E   +++A   +D ++ + + + DV+  N ++   VK   + +
Sbjct: 131 KLTHEALSH--VLHAYAESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLED 188

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A ++Y ++ E+       +   ++ G C  GKV + R+L++     G  P+ V Y T + 
Sbjct: 189 ARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIG 248

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC+ G+I+    + +E++ K   PT  T+  +I G CK+     + +LLE++   G+  
Sbjct: 249 GYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRV 308

Query: 482 DQITYNTIIRSFCKCKDLRKAFQL-----LNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
                N II +       R  F++     +  +  ++ +P  ATYNILI+ LC  G  + 
Sbjct: 309 CVWFLNNIIDA-----KYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEV 363

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY----- 591
           A  LL    +  + LT ++Y  +I+A+C   +   A     Q+ E+G +  I  Y     
Sbjct: 364 AAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIH 423

Query: 592 ----------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                       +    ++  G  PD  I  +++    + G       L + M+   +LP
Sbjct: 424 GLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILP 483

Query: 642 DKFL 645
           D ++
Sbjct: 484 DAYV 487



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/293 (20%), Positives = 127/293 (43%), Gaps = 20/293 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN-LRHTDIMW--DLYDDIKVSETPRN 62
           + R+GM+ +A+  + +M E  L     TY++++   ++  D+     ++ D++ ++   N
Sbjct: 530 FCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPN 589

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA-EVAKGLF 121
           V T + +I+G C Q     A    +E   ++  P+VV+   ++  + K     E A   +
Sbjct: 590 VVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYW 649

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGS---MEEA-----------LEFTNDMGRHGVEPD 167
            LM+     P+  ++N L+ G     S   + E             EF + M   G    
Sbjct: 650 ELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDH 709

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
              Y+ +     +   +  A  +  +++ KG  PD V++  ++ G+C +GN ++   +  
Sbjct: 710 GAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDF 769

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM--EAVGLKPDLVTYSI 278
             L +      + YS +L        I EA  +L+ M  +A   +P++   S+
Sbjct: 770 RNLDEKGLEVAVRYSRVLEQHLPKAVICEASTILHAMVEKADTKEPEICRISV 822


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 160/659 (24%), Positives = 297/659 (45%), Gaps = 20/659 (3%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVY 64
            + G + +A+ V  +MKE  +     +YNSL+      D+     +L++ +       N Y
Sbjct: 365  QVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGY 424

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T+ + I+   +  +   AI   +    K   P V + NA++S   + G   +AK +F  +
Sbjct: 425  THVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYEL 484

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
               G+ PD  +Y ++I     A   +EA+ F +DM   G  PD +  + L    +   + 
Sbjct: 485  KDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKG 544

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
            + AWK+  +L     +P   TY  L+ G  + G V+E + L E M       N+I Y+ +
Sbjct: 545  NEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTV 604

Query: 245  LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
            L  + K+G ++ A+G+LY M   G  PDL +Y+ ++ GL K+++  +A +++ +M  K +
Sbjct: 605  LDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQM-KKIL 663

Query: 305  SPNSFAHGAILLGLCEKEMITEARMYFDSLIM-SNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +P+      IL    +  ++ EA       I+ ++C  D   ++ +++G +    + +++
Sbjct: 664  APDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSI 723

Query: 364  QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +    +  + I  +      LI   CK+ K  +A +L +  K  G+     +Y + +   
Sbjct: 724  EFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGL 783

Query: 424  CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
             +E  I     L  EM+    GP   TY +++  + K  +++E +++  +M+  G     
Sbjct: 784  VDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTY 843

Query: 484  ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            +TYNTII    K K L +A  L   +      PT  TY  L+DGL   G + +A+ L   
Sbjct: 844  VTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNE 903

Query: 544  LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------- 593
            + E+        Y  ++  H   G+       F +MVE+G    I+ YT           
Sbjct: 904  MLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGR 963

Query: 594  -----SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                 S+F  +L  G  PD  I  +++    +   +     L   M K G++P+ +  N
Sbjct: 964  LNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYN 1022



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 158/641 (24%), Positives = 283/641 (44%), Gaps = 83/641 (12%)

Query: 2   LAFVYSRTGM---VHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSE 58
            A V+S  G+   +  A   +  M+E  + ++  TYN L+Y L  +        D +  E
Sbjct: 146 FATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGF------DAEAME 199

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
               VY  ++V DG+                      PSV + + +M  + K    +   
Sbjct: 200 ----VY-KAMVEDGIS---------------------PSVRTYSVLMVSFGKKRDVDTVL 233

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M   G+ P+ +SY I I  L  A   +EA +    M   G +PD +T++++ +  
Sbjct: 234 WLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVL 293

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               ++S A  V  K+      PD VTY  L+      G+ +  +++   M++ G+  N+
Sbjct: 294 CDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNI 353

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           ++Y+ ++ ++C+ GR+DEAL +  EM+  G+ P+  +Y+ LI G  K D   +A++L+N 
Sbjct: 354 VSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNH 413

Query: 299 MCSKRISPNSFAH-----------------------------------GAILLGLCEKEM 323
           M +   SPN + H                                    A+L  L     
Sbjct: 414 MNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGR 473

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           +  A+  F  L       D + Y +MI    K     EA+  +  ++E    P ++  NS
Sbjct: 474 LGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNS 533

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI    K GK  +A +L   +K   +EP+  TY T ++    EG ++ ++ LL+EM    
Sbjct: 534 LIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSI 593

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             P  +TY  V+  L K  ++  A+ +L  M   G TPD  +YNT++    K +   +AF
Sbjct: 594 HPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAF 653

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH----NISLTKVAYTTI 559
           ++  QM    L P  AT   ++     NG +K A   L +++E+    + +  K ++ ++
Sbjct: 654 RMFCQMK-KILAPDYATLCTILPSFVKNGLMKEA---LHTVKEYILKADCNTDKSSFHSL 709

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
           ++    +  V K++ F   +  +G  I + D+   F C ++
Sbjct: 710 MEGILNKAGVEKSIEFAENIASRG--ILLNDF---FLCPLI 745



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 222/482 (46%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +M + G+  + ++YN LI+ L  +G   EA+E    M   G+ P   TYS+L   F    
Sbjct: 168 VMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKR 227

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +     ++ ++  +G  P++ +YT+ I    Q    +E  ++   M   G K +V+ ++
Sbjct: 228 DVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHT 287

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           V++  +C +GR+ +A  + ++M+A   KPD VTY  L+            ++++N M + 
Sbjct: 288 VVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVAD 347

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             + N  ++ A++  LC+   + EA   FD +       +   YN +I G++K      A
Sbjct: 348 GYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRA 407

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++L+  +     SP+  T    I  + K+G+   A +  + +K  G+ P        +++
Sbjct: 408 LELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSS 467

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
               G +     +  E++   + P  +TYT++IK   K  K  EA+    DM   G  PD
Sbjct: 468 LARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPD 527

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +  N++I +  K     +A++L +Q+    +EPT+ TYN L+ GL   G +K    LL 
Sbjct: 528 VLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLE 587

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
            +         + Y T++      G+V+ A+     M EKG    +  Y    + ++   
Sbjct: 588 EMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEE 647

Query: 603 GF 604
            F
Sbjct: 648 RF 649



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 147/659 (22%), Positives = 289/659 (43%), Gaps = 61/659 (9%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVS 57
           M++F   R   V   ++++ +M+   +K ++ +Y     +L      D  + +   ++ S
Sbjct: 220 MVSFGKKRD--VDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDS 277

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +V T+++VI  LC   RL DA     +    +  P  V+   ++ +    G ++  
Sbjct: 278 GCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSV 337

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             ++  M+  G + +  SY  ++  LC  G ++EAL   ++M   G+ P+  +Y+ L  G
Sbjct: 338 MEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISG 397

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F        A ++   +   G  P+  T+ + I  Y + G   + ++  E M S+G   +
Sbjct: 398 FLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPD 457

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V A + +LSS+ +SGR+  A  + YE++ +G+ PD +TY+++I+   K  K  +A+    
Sbjct: 458 VAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMN--- 514

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
                                           +F  ++ + C+ DV+  N +ID   K G
Sbjct: 515 --------------------------------FFSDMVETGCVPDVLALNSLIDTLYKGG 542

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
              EA +L+ QL E +I P+  T+N+L+ G  + GKV +   LL+ +      P+ +TY 
Sbjct: 543 KGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYN 602

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T ++   + G +   + +L  M  K   P   +Y  V+ GL K+ + +EA ++   M  I
Sbjct: 603 TVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI 662

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH-NLEPTSATYNILIDGLCVNGDLKN 536
            + PD  T  TI+ SF K   +++A   + +  L  +     ++++ L++G+     ++ 
Sbjct: 663 -LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEK 721

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR------- 589
           +     ++    I L       +I+  C      +A   F +   KG  +S++       
Sbjct: 722 SIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKF--KGLGVSLKTGSYNSL 779

Query: 590 ----------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
                     D  +  F  M   G  PD+    ++L A  +   +  +  + A M + G
Sbjct: 780 IRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKG 838



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 150/620 (24%), Positives = 264/620 (42%), Gaps = 53/620 (8%)

Query: 7    SRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNV 63
            S+     +A+   + M E      +   NSL   LY     +  W L+  +K  +     
Sbjct: 504  SKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTN 563

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             T + ++ GL ++ ++++ +  L+E       P++++ N ++    K G    A G+   
Sbjct: 564  GTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYS 623

Query: 124  MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
            M + G  PD  SYN +++GL      EEA      M +  + PD  T   +   F     
Sbjct: 624  MTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQM-KKILAPDYATLCTILPSFVKNGL 682

Query: 184  ISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A   +++ ++K   + D  ++  L+ G      VE+ ++  E + S+G  LN     
Sbjct: 683  MKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLC 742

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             L+  +CK  +  EA  L  + + +G+     +Y+ LIRGL  ++ +  A  L+ EM   
Sbjct: 743  PLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL 802

Query: 303  RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
               P+ F +  IL  + +   I E       +         V YN +I G VK   + +A
Sbjct: 803  GCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQA 862

Query: 363  VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            + LY  L+ +  SP+  T+  L+ G  K GK+ DA  L + +  +G +P+   Y   +N 
Sbjct: 863  IDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNG 922

Query: 423  YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC----------------------- 459
            +   GN + +  + ++M  + I P   +YTV+I  LC                       
Sbjct: 923  HRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPD 982

Query: 460  ------------KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
                        K  +++EAV L  +M   G+ P+  TYN++I    K     +A Q+  
Sbjct: 983  LIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYE 1042

Query: 508  QMWLHNLEPTSATYNILIDGLCVNGDLKNA----DCLLVSLQEHNISLTKVAYTTIIKAH 563
            ++ +   +P   TYN LI G  V+G   NA    DC+ V      +SL     T +I   
Sbjct: 1043 ELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVG-----VSLK----TALISGL 1093

Query: 564  CAEGDVHKAMTFFCQMVEKG 583
              E  ++ A   F +M  +G
Sbjct: 1094 VDENLINIAEGLFAEMKRRG 1113



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 212/450 (47%), Gaps = 12/450 (2%)

Query: 69   VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
            +++G+  ++ ++ +I F +  A +    +   L  ++   CK   A  A  LF      G
Sbjct: 709  LMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLG 768

Query: 129  LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
            +     SYN LI GL     ++ A +   +M R G  PD  TY+++        +I    
Sbjct: 769  VSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEML 828

Query: 189  KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            +V  ++  KG +   VTY  +I G  +   +E+ + L   ++S+GF      Y  LL  +
Sbjct: 829  RVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGL 888

Query: 249  CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
             K+G++ +A  L  EM   G KP+   Y+IL+ G           Q++ +M  + I+P+ 
Sbjct: 889  LKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDI 948

Query: 309  FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             ++  ++  LC    + +   YF  L+      D+++YN++IDG  K   I EAV L+ +
Sbjct: 949  KSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNE 1008

Query: 369  LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
            + +K I P++ T+NSLI    K GK ++A ++ + + + G +P+  TY   +  Y   G+
Sbjct: 1009 MKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGS 1068

Query: 429  IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
                 A     +  A+G +    T +I GL  +  +  A  L  +M   G  PDQ TYN 
Sbjct: 1069 TDNAYA---AYDCVAVGVS--LKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNL 1123

Query: 489  IIRSFCKCKDLRKAFQL-------LNQMWL 511
            I+ +  K   + +  ++       LNQ+ L
Sbjct: 1124 ILDAIGKSMRIEEMLKVQEEIAEDLNQLTL 1153



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 190/387 (49%), Gaps = 8/387 (2%)

Query: 21   KMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
            K K L + +   +YNSL+  L      DI  DL+ ++K      + +T ++++D + +  
Sbjct: 763  KFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSM 822

Query: 78   RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
            R+++ +    E   K +  + V+ N I+S   K    E A  L+  ++  G  P   +Y 
Sbjct: 823  RIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYG 882

Query: 138  ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
             L+ GL  AG M +A    N+M  +G +P+   Y+IL  G  +        ++ +K++ +
Sbjct: 883  PLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQ 942

Query: 198  GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
            G +PDI +YTVLI   C  G + +GL     +L  G + ++I Y++L+  + KS RI+EA
Sbjct: 943  GINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEA 1002

Query: 258  LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
            + L  EM+  G+ P+L TY+ LI  L K  K  +A Q+Y E+  K   PN F + A++ G
Sbjct: 1003 VCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRG 1062

Query: 318  LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
                     A   +D + +      V L   +I G V    I  A  L+ ++  +   P 
Sbjct: 1063 YSVSGSTDNAYAAYDCVAVG-----VSLKTALISGLVDENLINIAEGLFAEMKRRGCGPD 1117

Query: 378  IVTFNSLIYGFCKNGKVADARRLLDTI 404
              T+N ++    K+ ++ +  ++ + I
Sbjct: 1118 QFTYNLILDAIGKSMRIEEMLKVQEEI 1144



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 194/452 (42%), Gaps = 13/452 (2%)

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAI------TYSI-LAKGFHLLSQISGAWKVI 191
           ++H L  A    EALE      R   +P A+       Y + L +    +  ++  + ++
Sbjct: 78  VVHMLRSAPGPAEALELFTAAAR---QPTAVHTTESCNYMLELMRAHGRVGDMAQVFDLM 134

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           QK ++K    ++ T+  +  G    G +        VM   G  LN   Y+ L+  + KS
Sbjct: 135 QKQIVKA---NVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKS 191

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G   EA+ +   M   G+ P + TYS+L+    K+  V   + L NEM ++ + PN +++
Sbjct: 192 GFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSY 251

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
              +  L +     EA      +  S C  DVV + ++I      G + +A  ++ ++  
Sbjct: 252 TICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKA 311

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
               P  VT+ +L+     +G       + + +   G   + V+YT  ++A C+ G +  
Sbjct: 312 SDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDE 371

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            LA+  EM+ K I P   +Y  +I G  K      A++L   M   G +P+  T+   I 
Sbjct: 372 ALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFIN 431

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            + K     KA Q    M    + P  A  N ++  L  +G L  A  +   L++  +S 
Sbjct: 432 YYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSP 491

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             + YT +IK         +AM FF  MVE G
Sbjct: 492 DTITYTMMIKCCSKASKADEAMNFFSDMVETG 523


>gi|302767038|ref|XP_002966939.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
 gi|300164930|gb|EFJ31538.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
          Length = 506

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 144/505 (28%), Positives = 251/505 (49%), Gaps = 5/505 (0%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY-GLHPDAFSYNILIHGLCIAGSMEEAL 153
            P+V + N +MS  CK G  + A  LF +ML      P+A +Y  LIHGLC+   +E A+
Sbjct: 1   APNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDSTPPNAITYRALIHGLCLKMELERAV 60

Query: 154 EFTNDMGRHGVEPDAITYSILA-KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
              + +          TY I+  K  H    +    ++++ +   GS   I      + G
Sbjct: 61  LLLDAVYFKLSWLVPATYLIIRFKACHERGNLRATIELLKDMAENGSTLSIQDLNGCLRG 120

Query: 213 YCQIGNVEEGLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
            C+ GNV+  L+  RE   S   + +V  YS+L++++  + R ++   +L EME+VGL+ 
Sbjct: 121 LCKAGNVDGALEFFREAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREMESVGLEA 180

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D  TYS++I  LCK   V KA  L   M S+   P++  +  ++  L +   + EA    
Sbjct: 181 DKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAVEIA 240

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
                 +C   VV YN ++ G++K   +   ++++ ++     SP I T+N L  G  ++
Sbjct: 241 KEADAKHCTS-VVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRH 299

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           G    A +LL  +   G+ P AVT+ + +N   E+    R + L+QEM ++   P  +TY
Sbjct: 300 GLWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITY 359

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           T+++K L +  +  E V+L + +    + P+  TYNT++ + CK   L +A +L   M  
Sbjct: 360 TILLKWLARNARADECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLA 419

Query: 512 HNLEPTSA-TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
            +  P +A TY  LI GLC+  +L+ A  LL ++ + + +     Y TI+ A C +G + 
Sbjct: 420 SDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRDCAPDVACYGTIVAAFCKQGRID 479

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSF 595
           +A     +M   G ++  R   ++ 
Sbjct: 480 EAFELLERMPFAGDKVMFRTLVRAL 504



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 218/476 (45%), Gaps = 11/476 (2%)

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC-KLGFAEVA 117
           TP N  T   +I GLC +  L+ A+L L     K       +   I  + C + G     
Sbjct: 36  TPPNAITYRALIHGLCLKMELERAVLLLDAVYFKLSWLVPATYLIIRFKACHERGNLRAT 95

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSILAK 176
             L   M + G        N  + GLC AG+++ ALEF  +      +     TYSIL  
Sbjct: 96  IELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFFREAKNSFSLRASVSTYSILVA 155

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
                 + +  +++++++   G + D  TY+++I   C+ G V++   L E M+S+    
Sbjct: 156 ALTAAKRNNDVYEILREMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVP 215

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +   Y  ++  + K+GR+DEA+ +  E +A      +VTY+ L+ G  K  ++ + I+++
Sbjct: 216 DARIYDPVIEELSKTGRVDEAVEIAKEADAKHCT-SVVTYNSLVLGFLKARRLKRGIKVF 274

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             M     SP+ + +  +  GL    +   A      +     + D V +N +I+G V+ 
Sbjct: 275 TRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVED 334

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
                AV L ++++ +   P+ +T+  L+    +N +  +   L   +    L P+  TY
Sbjct: 335 NRYHRAVTLIQEMVSRGCDPNAITYTILLKWLARNARADECVELFQRLLDRKLAPNVYTY 394

Query: 417 TTFMNAYCEEGNI---QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            T M+A C+ G +    RL  ++  + +    P  +TY  +I GLC + +L+ AV LL+ 
Sbjct: 395 NTVMSALCKAGRLDQAHRLFGVM--LASDCTPPNAITYRALIHGLCLKMELERAVLLLDA 452

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           M      PD   Y TI+ +FCK   + +AF+LL +M           +  L+  LC
Sbjct: 453 MAKRDCAPDVACYGTIVAAFCKQGRIDEAFELLERMPFAG---DKVMFRTLVRALC 505



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 197/424 (46%), Gaps = 15/424 (3%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR-NVYT 65
           G +   + ++  M E    +SIQ  N  L  L    + D   + + + K S + R +V T
Sbjct: 90  GNLRATIELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFFREAKNSFSLRASVST 149

Query: 66  NSIVIDGLCQQSRLQDA--ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            SI++  L    R  D   IL   E+ G E      SL  I+   CK G  + AK L   
Sbjct: 150 YSILVAALTAAKRNNDVYEILREMESVGLEADKDTYSL--IIHSLCKSGMVDKAKVLVER 207

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLLS 182
           M+     PDA  Y+ +I  L   G ++EA+E   +   +H      +TY+ L  GF    
Sbjct: 208 MISRNCVPDARIYDPVIEELSKTGRVDEAVEIAKEADAKHCTS--VVTYNSLVLGFLKAR 265

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++    KV  ++   G  PDI TY +L  G  + G      KL   M   G   + + ++
Sbjct: 266 RLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDAVTFN 325

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++ + +  R   A+ L+ EM + G  P+ +TY+IL++ L +  +  + ++L+  +  +
Sbjct: 326 SLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLARNARADECVELFQRLLDR 385

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-QDVVLYNIMIDGYVKLGNIGE 361
           +++PN + +  ++  LC+   + +A   F  ++ S+C   + + Y  +I G      +  
Sbjct: 386 KLAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNAITYRALIHGLCLKMELER 445

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           AV L   + ++  +P +  + +++  FCK G++ +A  LL+ +   G     V + T + 
Sbjct: 446 AVLLLDAMAKRDCAPDVACYGTIVAAFCKQGRIDEAFELLERMPFAG---DKVMFRTLVR 502

Query: 422 AYCE 425
           A C+
Sbjct: 503 ALCK 506



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/424 (20%), Positives = 154/424 (36%), Gaps = 87/424 (20%)

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-QDVVLYNIMIDG----------- 352
           +PN + +  ++  LC+   + +A   F  ++ S+    + + Y  +I G           
Sbjct: 1   APNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDSTPPNAITYRALIHGLCLKMELERAV 60

Query: 353 ------YVKL-------------------GNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                 Y KL                   GN+   ++L + + E   + SI   N  + G
Sbjct: 61  LLLDAVYFKLSWLVPATYLIIRFKACHERGNLRATIELLKDMAENGSTLSIQDLNGCLRG 120

Query: 388 FCKNGKVADARRLLDTIK-LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
            CK G V  A       K    L  S  TY+  + A         +  +L+EME+  +  
Sbjct: 121 LCKAGNVDGALEFFREAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREMESVGLEA 180

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ----------------------- 483
              TY+++I  LCK   + +A  L+E M      PD                        
Sbjct: 181 DKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAVEIA 240

Query: 484 -----------ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
                      +TYN+++  F K + L++  ++  +M      P   TYNIL +GL  +G
Sbjct: 241 KEADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHG 300

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             + A  LL  + +  +    V + ++I     +   H+A+T   +MV +G + +   YT
Sbjct: 301 LWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYT 360

Query: 593 ---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKS 637
                             F  +L     P+      ++ A  + G L     L  VM+ S
Sbjct: 361 ILLKWLARNARADECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLAS 420

Query: 638 GLLP 641
              P
Sbjct: 421 DCTP 424


>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 259/528 (49%), Gaps = 42/528 (7%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNV 63
           ++ G    A  VI K++     V+I  +N+ L +L   + +   W +Y ++       NV
Sbjct: 179 TQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENV 238

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T ++V+  LC+  +LQ+A+                                    +F  
Sbjct: 239 NTFNVVVHALCKDCKLQEAL-----------------------------------SVFYR 263

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM---GRHGVEPDAITYSILAKGFHL 180
           +LK G+ P+  ++N+++ G C  G M+ AL+    M       ++P+++TY+ L  GF  
Sbjct: 264 ILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCK 323

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +  I+ A ++  +++    +P++ TY  +I GY + G +EE L+L + M+ +G   N + 
Sbjct: 324 IGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVV 383

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ ++  +   G +D A  +  +M    +  D  T SIL RGLC+   +  A++  N++ 
Sbjct: 384 YNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVL 443

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
              +  ++F+H  ++  LC+      AR     + +   + DVV +  +IDG+ K GNI 
Sbjct: 444 ENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIE 503

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            AVQ+Y ++++    P+++ +NS+I G CK+G V  AR L+D ++  GL    +TY T +
Sbjct: 504 SAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGL-VDTITYNTLI 562

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N Y   G   +   L   M+   I  +  TY  VIK LCK   +QEA +L+  M + GV 
Sbjct: 563 NGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVL 622

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           PD ITY T++ +  K     +  +L + M L  + P   TY  ++  L
Sbjct: 623 PDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLTYENIVSPL 670



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 203/403 (50%), Gaps = 4/403 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQET---AGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           NV T ++++DG C+   +  A+  +++    +     P+ V+ N+++  +CK+G   VA+
Sbjct: 272 NVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAE 331

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M+K  + P+  +Y  +I G   AG +EEAL   ++M   G+ P+++ Y+ +    
Sbjct: 332 ELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWL 391

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
           ++   + GA  V   +  K    D  T ++L  G C+ G +   LK    +L      + 
Sbjct: 392 YMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDA 451

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
            ++++L++ +CKS     A  LL  M   GL PD+VT+  LI G CK+  +  A+Q+Y++
Sbjct: 452 FSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDK 511

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M      PN   + +I+ GLC+  ++  AR   D L     + D + YN +I+GY   G 
Sbjct: 512 MVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGLV-DTITYNTLINGYFNCGK 570

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             +A +L   +    I  S  T+N++I   CK G V +A+ L+  + L G+ P  +TY T
Sbjct: 571 FDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRT 630

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
            +    +  + + ++ L   M  K + P  +TY  ++  L ++
Sbjct: 631 LVININKNCSAEEVIELHDYMVLKGVVPDKLTYENIVSPLLQE 673



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 237/513 (46%), Gaps = 22/513 (4%)

Query: 151 EALEFTNDMGRHGV-EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           E LE  N+   +G+ E +   +  L +    +    GA +VI+KL I+G    I  +   
Sbjct: 152 EVLEALNN--SYGICESNHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNF 209

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           +    ++  +     + + M+S G+  NV  ++V++ ++CK  ++ EAL + Y +   G+
Sbjct: 210 LSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGI 269

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNE---MCSKRISPNSFAHGAILLGLCEKEMITE 326
            P++VT+++++ G CK   +  A++L  +   M +  I PNS  + +++ G C+   IT 
Sbjct: 270 WPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITV 329

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A    + ++  +   +V  Y  MI+GY + G + EA++L  +++E+ + P+ V +NS+++
Sbjct: 330 AEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMH 389

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
                G V  A  +   +    +     T +      C  G I   L  L ++    +  
Sbjct: 390 WLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIE 449

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              ++ ++I  LCK      A QLL  MYV G+ PD +T+ T+I   CK  ++  A Q+ 
Sbjct: 450 DAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVY 509

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           ++M     +P    YN +I+GLC +G +  A  L+  LQ   +  T + Y T+I  +   
Sbjct: 510 DKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGLVDT-ITYNTLINGYFNC 568

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MMLSNGFPPDQEIC 611
           G   KA      M   G   S   Y     F C             MM+  G  PD    
Sbjct: 569 GKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITY 628

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
             ++I  ++      V EL   M+  G++PDK 
Sbjct: 629 RTLVININKNCSAEEVIELHDYMVLKGVVPDKL 661



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 150/323 (46%), Gaps = 4/323 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           YSR G + +A+ +  +M E  L  +   YNS+   LY     D    ++ D+   + P +
Sbjct: 356 YSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLD 415

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T SI+  GLC+   +  A+ FL +           S N +++  CK      A+ L  
Sbjct: 416 KFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLA 475

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   GL PD  ++  LI G C  G++E A++  + M +   +P+ + Y+ +  G     
Sbjct: 476 RMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDG 535

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A  ++  L   G   D +TY  LI GY   G  ++  KL  +M + G   +   Y+
Sbjct: 536 LVDVARSLVDVLQRMGL-VDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYN 594

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            ++  +CK G + EA  L+  M   G+ PD +TY  L+  + K     + I+L++ M  K
Sbjct: 595 TVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLK 654

Query: 303 RISPNSFAHGAILLGLCEKEMIT 325
            + P+   +  I+  L ++E  T
Sbjct: 655 GVVPDKLTYENIVSPLLQEESAT 677


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 154/590 (26%), Positives = 277/590 (46%), Gaps = 35/590 (5%)

Query: 5   VYSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNV 63
            Y +  M   A+ V  +M+E+   + +I++YN+LL                       N 
Sbjct: 87  TYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLL-----------------------NA 123

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +  +       +Q    +++    ETAG    P++ + N ++   CK    E A+G    
Sbjct: 124 FVEA-------KQWVKVESLFAYFETAG--VAPNLQTYNVLIKMSCKKKEFEKARGFLDW 174

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M K G  PD FSY+ +I+ L  AG +++ALE  ++M   GV PD   Y+IL  GF     
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234

Query: 184 ISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
              A ++  +LL   S  P++ T+ ++I G  + G V++ LK+ E M     + ++  YS
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+  +C +G +D+A  +  E++      D+VTY+ ++ G C+  K+ ++++L+  M  K
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             S N  ++  ++ GL E   I EA M +  +       D   Y I I G    G + +A
Sbjct: 355 N-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKA 413

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           + + +++        +  + S+I   CK  ++ +A  L+  +  HG+E ++      +  
Sbjct: 414 LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG 473

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
              +  +      L+EM      PT V+Y ++I GLCK  K  EA   +++M   G  PD
Sbjct: 474 LIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             TY+ ++   C+ + +  A +L +Q     LE     +NILI GLC  G L +A  ++ 
Sbjct: 534 LKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMA 593

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +++  N +   V Y T+++     GD ++A   +  M + G +  I  Y 
Sbjct: 594 NMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYN 643



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 250/502 (49%), Gaps = 2/502 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V++ S VI+ L +  +L DA+    E + +   P V   N ++  + K    + A  L+
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELW 242

Query: 122 CLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             +L+   ++P+  ++NI+I GL   G +++ L+    M ++  E D  TYS L  G   
Sbjct: 243 DRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A  V  +L  + +  D+VTY  ++ G+C+ G ++E L+L  +M  +   +N+++
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVS 361

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y++L+  + ++G+IDEA  +   M A G   D  TY I I GLC    V+KA+ +  E+ 
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           S     + +A+ +I+  LC+K+ + EA      +       +  + N +I G ++   +G
Sbjct: 422 SSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLG 481

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA    R++ +    P++V++N LI G CK GK  +A   +  +  +G +P   TY+  +
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
              C +  I   L L  +     +    + + ++I GLC   KL +A+ ++ +M     T
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            + +TYNT++  F K  D  +A  +   M+   L+P   +YN ++ GLC+   +  A   
Sbjct: 602 ANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEF 661

Query: 541 LVSLQEHNISLTKVAYTTIIKA 562
               + H I  T   +  +++A
Sbjct: 662 FDDARNHGIFPTVYTWNILVRA 683



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 251/506 (49%), Gaps = 11/506 (2%)

Query: 27  LKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAI 83
            K  + +Y++++ +L      D   +L+D++       +V   +I+IDG  ++   + A+
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM 239

Query: 84  -LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
            L+ +        P+V + N ++S   K G  +    ++  M +     D ++Y+ LIHG
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA---WKVIQKLLIKGS 199
           LC AG++++A    N++       D +TY+ +  GF    +I  +   W++++      +
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEH----KN 355

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
             +IV+Y +LI G  + G ++E   +  +M ++G+  +   Y + +  +C +G +++ALG
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           ++ E+E+ G   D+  Y+ +I  LCK+ ++ +A  L  EM    +  NS    A++ GL 
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
               + EA  +   +  + C   VV YNI+I G  K G  GEA    ++++E    P + 
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T++ L+ G C++ K+  A  L       GLE   + +   ++  C  G +   + ++  M
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
           E +      VTY  +++G  K      A  +   MY +G+ PD I+YNTI++  C C+ +
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGV 655

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILI 525
             A +  +    H + PT  T+NIL+
Sbjct: 656 SYAMEFFDDARNHGIFPTVYTWNILV 681



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 235/491 (47%), Gaps = 7/491 (1%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSL----LYNLRHTDIMWDLYDDI-KVSETPR 61
           ++ G + DA+ +  +M E  +   +  YN L    L    H   M +L+D + + S    
Sbjct: 195 AKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM-ELWDRLLEDSSVYP 253

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T++I+I GL +  R+ D +   +     E    + + ++++   C  G  + A+ +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             + +     D  +YN ++ G C  G ++E+LE    M  H    + ++Y+IL KG    
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLEN 372

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  + + +  KG   D  TY + I G C  G V + L + + + S G  L+V AY
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++  +CK  R++EA  L+ EM   G++ +    + LI GL +  ++ +A     EM  
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               P   ++  ++ GLC+     EA  +   ++ +    D+  Y+I++ G  +   I  
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A++L+ Q ++  +   ++  N LI+G C  GK+ DA  ++  ++      + VTY T M 
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            + + G+  R   +   M    + P  ++Y  ++KGLC    +  A++  +D    G+ P
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672

Query: 482 DQITYNTIIRS 492
              T+N ++R+
Sbjct: 673 TVYTWNILVRA 683



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 204/435 (46%), Gaps = 4/435 (0%)

Query: 30  SIQTYNSLLYNLR---HTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           +++T+N ++  L      D    +++ +K +E  +++YT S +I GLC    +  A    
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            E   ++    VV+ N ++  +C+ G  + +  L+ +M ++    +  SYNILI GL   
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLEN 372

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G ++EA      M   G   D  TY I   G  +   ++ A  V+Q++   G   D+  Y
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             +I   C+   +EE   L + M   G +LN    + L+  + +  R+ EA   L EM  
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G +P +V+Y+ILI GLCK  K  +A     EM      P+   +  +L GLC    I  
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A   +   + S    DV+++NI+I G   +G + +A+ +   +  +  + ++VT+N+L+ 
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           GF K G    A  +   +   GL+P  ++Y T M   C    +   +    +     I P
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672

Query: 447 THVTYTVVIKGLCKQ 461
           T  T+ ++++ +  +
Sbjct: 673 TVYTWNILVRAVVNR 687



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/434 (22%), Positives = 185/434 (42%), Gaps = 55/434 (12%)

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           ++RE+    G +  + +Y+ LL++  ++ +  +   L    E  G+ P+L TY++LI+  
Sbjct: 103 RMREIF---GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMS 159

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CK+ +  KA    + M  +   P+ F++  ++  L +   + +A   FD +       DV
Sbjct: 160 CKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDV 219

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIE-KRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
             YNI+IDG++K  +   A++L+ +L+E   + P++ T N +I G  K G+V D  ++ +
Sbjct: 220 TCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWE 279

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +K +  E    TY++                                   +I GLC   
Sbjct: 280 RMKQNEREKDLYTYSS-----------------------------------LIHGLCDAG 304

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            + +A  +  ++     + D +TYNT++  FC+C  ++++ +L   M  H       +YN
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYN 363

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           ILI GL  NG +  A  +   +     +  K  Y   I   C  G V+KA+    ++   
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423

Query: 583 GFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           G  + +  Y     C+               M  +G   +  +C  ++    +   LG  
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483

Query: 628 FELAAVMIKSGLLP 641
                 M K+G  P
Sbjct: 484 SFFLREMGKNGCRP 497



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 167/355 (47%), Gaps = 10/355 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL------RHTDIMWDLYDDIKVSET 59
           + R G + +++  + ++ E    V+I +YN L+  L          ++W L   +     
Sbjct: 335 FCRCGKIKESL-ELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRL---MPAKGY 390

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             +  T  I I GLC    +  A+  +QE         V +  +I+   CK    E A  
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASN 450

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M K+G+  ++   N LI GL     + EA  F  +MG++G  P  ++Y+IL  G  
Sbjct: 451 LVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC 510

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +   A   ++++L  G  PD+ TY++L+CG C+   ++  L+L    L  G + +V+
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVM 570

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            +++L+  +C  G++D+A+ ++  ME      +LVTY+ L+ G  K    ++A  ++  M
Sbjct: 571 MHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYM 630

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
               + P+  ++  I+ GLC    ++ A  +FD          V  +NI++   V
Sbjct: 631 YKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 94/225 (41%), Gaps = 16/225 (7%)

Query: 390 KNGKVADARRLLDTIKLH-GLEPSAVTYTTFMNAYCEE---GNIQRLLALLQEMETKAIG 445
           KN + A A  L D+   H G   SAV Y   +    E     ++ R++ L++  E K   
Sbjct: 21  KNPRAAFA--LFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDE 78

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMY-VIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
              ++   VIK   K     +A+ + + M  + G  P   +YNT++ +F + K   K   
Sbjct: 79  DVALS---VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVES 135

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           L        + P   TYN+LI   C   + + A   L  + +        +Y+T+I    
Sbjct: 136 LFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLA 195

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
             G +  A+  F +M E+G    +  Y       +L +GF  +++
Sbjct: 196 KAGKLDDALELFDEMSERGVAPDVTCYN------ILIDGFLKEKD 234


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 154/602 (25%), Positives = 260/602 (43%), Gaps = 56/602 (9%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEVAKGLFCL 123
           T SI+I   C+  RL+             +  + +  N ++   C      E    L   
Sbjct: 197 TYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWR 256

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH---GVEPDAITYSILAKGFHL 180
           M ++G  P+  SYN L+ G C     EEALE  + M         PD ++Y+ +  GF  
Sbjct: 257 MPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFR 316

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             Q+  A+ +  +++ +G  PD+VTY  +I G C+   V+    + + ML +G K +   
Sbjct: 317 EGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGT 376

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+     +G+  E + LL EM    L+PD   Y++L+  LCK  +  +A  +++ + 
Sbjct: 377 YNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVI 436

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K I P++              MI EA   FD +       +VV Y  +ID   KLG + 
Sbjct: 437 RKGIKPDA--------------MIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVD 482

Query: 361 EAVQLYRQLI-----------------------EKRISPSIVTFNSLIYGFCKNGKVADA 397
           +A+  + Q+I                       ++ I   +V FN+L+   C+ G+V +A
Sbjct: 483 DAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEA 542

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
           +RL++ +   G+ P  ++Y T ++ +C  G       LL  M +  + P   TY  ++ G
Sbjct: 543 QRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHG 602

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
            CK  ++ +A  LL +M + G TPD +TYNTI+    +     +A +L   M     +  
Sbjct: 603 YCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWD 662

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             TYNI+++GLC N  +  A  +  SL    + L  + +  +I A    G    AM  F 
Sbjct: 663 MYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFA 722

Query: 578 QMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
            +   G    +  Y                   F  M  NG  P+  +   ++  F   G
Sbjct: 723 TISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRG 782

Query: 623 DL 624
           D+
Sbjct: 783 DI 784



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/556 (25%), Positives = 256/556 (46%), Gaps = 52/556 (9%)

Query: 21  KMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGL 73
           +M E     ++ +YN+L+             +++  + DD  +S  P +V + + VI+G 
Sbjct: 256 RMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLS-CPPDVVSYNTVINGF 314

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
            ++ ++  A     +   +   P VV+ N ++   CK    + AK +F  ML  G+ P  
Sbjct: 315 FREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSN 374

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY---------------------S 172
            +YN LIHG    G  +E +    +M  H +EPD   Y                     S
Sbjct: 375 GTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDS 434

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG-LKLREV--- 228
           ++ KG    + I  A  +  K+  +G  P++V Y  LI   C++G V++  LK  ++   
Sbjct: 435 VIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINE 494

Query: 229 -------------------MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
                              ML QG +L+V+ ++ L+  +C+ GR+ EA  L+  M  VG+
Sbjct: 495 VYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGV 554

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           +PD+++Y+ L+ G C   +  +A +L + M S  + PN F +  +L G C+   I +A  
Sbjct: 555 RPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYS 614

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               ++M+    DVV YN ++ G  + G   EA +LY  +I  R    + T+N ++ G C
Sbjct: 615 LLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLC 674

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           KN  V +A ++  ++   GL+   +T+   + A  + G  +  + L   +    + P   
Sbjct: 675 KNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVE 734

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY ++ + L K+  L+E   L   M   G  P+    N ++R F    D+ +A   L+++
Sbjct: 735 TYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKL 794

Query: 510 WLHNLEPTSATYNILI 525
              N    ++T ++LI
Sbjct: 795 DEKNFSLEASTASMLI 810



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/553 (25%), Positives = 251/553 (45%), Gaps = 56/553 (10%)

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETA---GKEFGPSVVSLNAIMSRYCKLGFAE 115
           TP NV + + ++ G C ++R ++A+  L   A   G    P VVS N +++ + + G  +
Sbjct: 263 TP-NVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVD 321

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            A  LF  M+  G+ PD  +YN +I GLC A  ++ A      M   GV+P   TY+ L 
Sbjct: 322 KAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLI 381

Query: 176 KGFHLLSQISGAWKVIQKLLIKGS----DPDIVTYTVLICGYCQIGN------------- 218
            G+  LS  +G WK + +LL + S    +PD   Y +L+   C+ G              
Sbjct: 382 HGY--LS--TGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIR 437

Query: 219 --------VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL------------ 258
                   ++E + + + M  QG   NV+ Y  L+ ++CK GR+D+A+            
Sbjct: 438 KGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYG 497

Query: 259 -----------GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
                       L++EM   G++ D+V ++ L+  LC++ +V +A +L   M    + P+
Sbjct: 498 LCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPD 557

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
             ++  ++ G C      EA    D ++      +   YN ++ GY K   I +A  L R
Sbjct: 558 VISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLR 617

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           +++    +P +VT+N++++G  + G+ ++A+ L   +     +    TY   +N  C+  
Sbjct: 618 EMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNN 677

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            +     + Q + +K +    +T+ ++I  L K  K ++A+ L   +   G+ PD  TY 
Sbjct: 678 CVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYC 737

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            I  +  K   L +   L + M  +   P S   N L+      GD+  A   L  L E 
Sbjct: 738 LIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEK 797

Query: 548 NISLTKVAYTTII 560
           N SL     + +I
Sbjct: 798 NFSLEASTASMLI 810



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/524 (24%), Positives = 231/524 (44%), Gaps = 71/524 (13%)

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSD---PDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           A G H   +      +  +++ + SD   PD  TY++LI  +C++G +E G  +  ++L 
Sbjct: 164 ASGRHSTLESQLGISLFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILK 223

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALG-LLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            G+++N I ++ LL  +C + R+DEA   LL+ M   G  P++V+Y+ L++G C +++  
Sbjct: 224 TGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAE 283

Query: 291 KAIQLYNEMCSKR---ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +A++L + M   +     P+  ++  ++ G   +  + +A   F  +I      DVV YN
Sbjct: 284 EALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYN 343

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +IDG  K   +  A  +++Q+++K + PS  T+N LI+G+   GK  +  RLL+ +  H
Sbjct: 344 TVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTH 403

Query: 408 GLEPSAVTYTTFMNAYCEEGN---------------------IQRLLALLQEMETKAIGP 446
            LEP    Y   ++  C+ G                      I   + +  +M  + + P
Sbjct: 404 DLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSP 463

Query: 447 THVTYTVVIKGLCKQWKLQEAV----QLLEDMYVI-------------------GVTPDQ 483
             V Y  +I  LCK  ++ +A+    Q++ ++Y +                   G+  D 
Sbjct: 464 NVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDV 523

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           + +NT++   C+   + +A +L+  M    + P   +YN L+DG C+ G    A  LL  
Sbjct: 524 VVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDV 583

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           +    +   +  Y T++  +C    +  A +   +M                    L NG
Sbjct: 584 MVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREM--------------------LMNG 623

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             PD      +L    Q G      EL   MI S    D +  N
Sbjct: 624 PTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYN 667



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 184/409 (44%), Gaps = 17/409 (4%)

Query: 34  YNSLLYNLRHTDIMWD----LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           ++S++      D M D    ++D ++      NV     +ID LC+  R+ DAIL   + 
Sbjct: 432 FDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQM 491

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             + +G             C +   E A+ L   ML  G+  D   +N L+  LC  G +
Sbjct: 492 INEVYG------------LCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRV 539

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
            EA      M R GV PD I+Y+ L  G  L  +   A K++  ++  G  P+  TY  L
Sbjct: 540 MEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTL 599

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + GYC+   +++   L   ML  G   +V+ Y+ +L  + ++GR  EA  L   M     
Sbjct: 600 LHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRT 659

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           + D+ TY+I++ GLCK + V +A +++  +CSK +  +      ++  L +     +A  
Sbjct: 660 QWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMD 719

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
            F ++     + DV  Y ++ +  +K G++ E   L+  + E   +P+    N+L+  F 
Sbjct: 720 LFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFL 779

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
             G ++ A   L  +        A T +  ++ Y   G  Q+L   L E
Sbjct: 780 HRGDISRAGAYLSKLDEKNFSLEASTASMLISLY-SRGEYQQLAKSLPE 827



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 186/393 (47%), Gaps = 30/393 (7%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIM------------------ 47
            M+ +AV +  KM++  L  ++  Y +L+  L    R  D +                  
Sbjct: 444 AMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEK 503

Query: 48  WDLYDDIKVSETPRNVYTNSIVID----GLCQQSRLQDAILFLQETAGKEFGPSVVSLNA 103
           W+  +++      + +  + +V +     LC++ R+ +A   ++        P V+S N 
Sbjct: 504 WEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNT 563

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           ++  +C  G  + A  L  +M+  GL P+ F+YN L+HG C A  +++A     +M  +G
Sbjct: 564 LVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNG 623

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
             PD +TY+ +  G     + S A ++   ++   +  D+ TY +++ G C+   V+E  
Sbjct: 624 PTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAF 683

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           K+ + + S+G +L++I +++++ ++ K G+ ++A+ L   + A GL PD+ TY ++   L
Sbjct: 684 KMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENL 743

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
            K+  + +   L++ M     +PNS    A++     +  I+ A  Y   L   N   + 
Sbjct: 744 IKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEA 803

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
              +++I  Y +    GE  QL + L EK   P
Sbjct: 804 STASMLISLYSR----GEYQQLAKSLPEKYRFP 832



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 105/279 (37%), Gaps = 30/279 (10%)

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA----------LLQEMETKAIG 445
           DA +L D +  H    S   +   + A          L           +++E   K + 
Sbjct: 134 DALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDK-VA 192

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ- 504
           P   TY+++I   C+  +L+    +   +   G   + I +N +++  C  K L +A   
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA-DCLLVSLQEHNISLTK--VAYTTIIK 561
           LL +M      P   +YN L+ G C     + A + L V   +  +S     V+Y T+I 
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312

Query: 562 AHCAEGDVHKAMTFFCQMVEKGF---------------EISIRDYTKSFFCMMLSNGFPP 606
               EG V KA   F QM+++G                +  + D  K+ F  ML  G  P
Sbjct: 313 GFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKP 372

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                  ++  +   G    V  L   M    L PD F+
Sbjct: 373 SNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFI 411



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 3/213 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y +   + DA  ++ +M        + TYN++L+ L  T    +   LY ++  S T  +
Sbjct: 603 YCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWD 662

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           +YT +I+++GLC+ + + +A    Q    K     +++ N ++    K G  E A  LF 
Sbjct: 663 MYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFA 722

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +  YGL PD  +Y ++   L   GS+EE     + M  +G  P++   + L + F    
Sbjct: 723 TISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRG 782

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            IS A   + KL  K    +  T ++LI  Y +
Sbjct: 783 DISRAGAYLSKLDEKNFSLEASTASMLISLYSR 815



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 108/272 (39%), Gaps = 32/272 (11%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           TG   +A  ++  M  + LK +  TYN+LL+                             
Sbjct: 571 TGRTDEAAKLLDVMVSIGLKPNEFTYNTLLH----------------------------- 601

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
              G C+  R+ DA   L+E       P VV+ N I+    + G    AK L+  M+   
Sbjct: 602 ---GYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSR 658

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
              D ++YNI+++GLC    ++EA +    +   G++   IT++I+        +   A 
Sbjct: 659 TQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAM 718

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            +   +   G  PD+ TY ++     + G++EE   L   M   G   N    + L+   
Sbjct: 719 DLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRF 778

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
              G I  A   L +++      +  T S+LI
Sbjct: 779 LHRGDISRAGAYLSKLDEKNFSLEASTASMLI 810


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 151/560 (26%), Positives = 265/560 (47%), Gaps = 42/560 (7%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMW--DLYDDIKVSETPR 61
           V+    M  DA+    + K++   V +Q  N LL  L     IM+   L+DD+K S    
Sbjct: 152 VFVELSMFEDALVTYVEAKKVG--VELQVCNFLLKRLVEGNQIMYARSLFDDMKSSGPSP 209

Query: 62  NVYTNSIVID-------------------------------------GLCQQSRLQDAIL 84
           NVY+ S+++                                      GLC   +++ A  
Sbjct: 210 NVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHAKQVKSAWN 269

Query: 85  FLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
           FLQ    + +  +    NA++  +C  G    A  +F  M K G  PD  SY+IL+ GLC
Sbjct: 270 FLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLC 329

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
             G +        +M R+G+ P+ ++YS L  G     ++  A+++ ++L  +G   D +
Sbjct: 330 KQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHI 389

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            Y++++ G CQ  ++E    L   M+   F  +   YS L+ + C+  ++ EAL +   M
Sbjct: 390 VYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELM 449

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
            + G+ P++VT +IL+ G   +  + +A    +++    + P+   +  I+ GLC+    
Sbjct: 450 VSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKP 509

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            +    F  +I    + D VLY+I+IDG+VK  ++ EA +LY +++++   P+I T+ SL
Sbjct: 510 NDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSL 569

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I G C + K+ +   L   +   GL P  + YT+ +  YC+  N++  L + +EMET+ +
Sbjct: 570 INGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGL 629

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
                 YT +I G  K   +  A   +E+M   G+TP  +TY  +I  + K  D +KA  
Sbjct: 630 SADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMA 689

Query: 505 LLNQMWLHNLEPTSATYNIL 524
           + N M    + P +    IL
Sbjct: 690 MYNSMLQAGIAPDAKLSCIL 709



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 220/456 (48%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+ P+A +Y   ++GLC A  ++ A  F   + + G   +   ++ +  GF    Q+  A
Sbjct: 243 GVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKA 302

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            +V   +   G  PD+ +Y++L+ G C+ G+V  G  +   M   G   N+++YS LL  
Sbjct: 303 IEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHG 362

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C++GR++ A  L   ++  G K D + YSI++ G C+   +     L+N+M      P+
Sbjct: 363 LCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPD 422

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           ++ + +++   C    + EA   F+ ++      +VV   I++ G+   G IGEA     
Sbjct: 423 AYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLD 482

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++ +  + PS+ T+  +I+G CK  K  D   +   +   G  P  V Y+  ++ + +  
Sbjct: 483 KVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKAL 542

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           ++Q    L  +M  +   P   TYT +I GLC   KL E + L + M   G+ PD+I Y 
Sbjct: 543 DLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYT 602

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           ++I  +CK  +++ A ++  +M    L   S  Y  LI G      +  A   +  +   
Sbjct: 603 SLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNK 662

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            ++ T V YT +I  +   GD  KAM  +  M++ G
Sbjct: 663 GLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAG 698



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 236/523 (45%), Gaps = 17/523 (3%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL- 195
           N L+  L     +  A    +DM   G  P+  +YS+L   +   +++     +      
Sbjct: 180 NFLLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEM 239

Query: 196 -IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
            ++G  P+  TY   + G C    V+      +++  +G+  N   ++ ++   C  G++
Sbjct: 240 EVEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQV 299

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            +A+ +   M+  G  PD+ +YSIL+ GLCKQ  V     +  EM    I+PN  ++ ++
Sbjct: 300 HKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSL 359

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           L GLC    +  A   F  L       D ++Y+I++ G  +  ++     L+  ++    
Sbjct: 360 LHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNF 419

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P    ++SLIY +C++ ++ +A  + + +   G+ P+ VT T  ++ +  EG I     
Sbjct: 420 VPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFL 479

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
            L ++    + P+  TY V+I GLCK  K  +   +  DM   G  PD + Y+ II  F 
Sbjct: 480 FLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFV 539

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K  DL++AF+L  +M     +P   TY  LI+GLC +  L     L   +    ++  ++
Sbjct: 540 KALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRI 599

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMM 599
            YT++I  +C   ++  A+  F +M  +G       YT               + F   M
Sbjct: 600 LYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEM 659

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           ++ G  P       +++ + + GD      +   M+++G+ PD
Sbjct: 660 MNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPD 702



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 197/434 (45%), Gaps = 17/434 (3%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV--GLKPDLVTYSILIRGLCKQ 286
           M S G   NV +YSVL+S      ++     L    E    G++P+  TY+  + GLC  
Sbjct: 202 MKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHA 261

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            +V  A      +C +    N++   A++ G C    + +A   FD +     + DV  Y
Sbjct: 262 KQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSY 321

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           +I++DG  K G++     +  ++    I+P++V+++SL++G C+ G+V  A  L   +K 
Sbjct: 322 SILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKD 381

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G +   + Y+  ++  C+  +++    L  +M      P    Y+ +I   C+  +L+E
Sbjct: 382 QGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKE 441

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A+++ E M   G+ P+ +T   ++  F     + +AF  L+++    + P+  TY ++I 
Sbjct: 442 ALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIH 501

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           GLC      +   +   + +       V Y+ II       D+ +A   + +MV++G + 
Sbjct: 502 GLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKP 561

Query: 587 SIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           +I  YT                + F  M+  G  PD+ +   ++  + +  ++ +  E+ 
Sbjct: 562 NIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIF 621

Query: 632 AVMIKSGLLPDKFL 645
             M   GL  D F+
Sbjct: 622 REMETEGLSADSFV 635



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 116/237 (48%), Gaps = 5/237 (2%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDD-IKV 56
           +L   +S  G++ +A   + K+++  +  S+ TY  +++ L      + MW ++ D IK 
Sbjct: 463 ILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKR 522

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
              P  V   SI+IDG  +   LQ+A     +   +   P++ +  ++++  C       
Sbjct: 523 GYVPDTVLY-SIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPE 581

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
              LF  M+  GL PD   Y  LI   C   +M+ ALE   +M   G+  D+  Y+ L  
Sbjct: 582 VMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIG 641

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           GF  +  + GA   +++++ KG  P +VTYT LI GY +IG+ ++ + +   ML  G
Sbjct: 642 GFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAG 698


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 254/524 (48%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N YT   V+ GLC + R+ DA+  L E + K   P     + I+   C+ G    +  
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   M   G   D  + N++++ +C  G ++EA+     +   G E D ++Y+ + KG  
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           +  +     +++ +++     P+IVT+  LI   C+ G  E   ++   M   G   ++ 
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ ++  +CK G ++ A  +L  M + GLKP++V Y+ +++GLC  ++  +A +L +EM
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K    +      ++   C+  ++       + ++   C+ DV+ Y  +I+G+ K G I
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EAV L + +      P+ V++  ++ G C  G+  DA  L+  +   G  P+ VT+ T 
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N  C++G +++ + LL++M      P  ++Y+ VI GL K  K +EA++LL  M   G+
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +P+ I Y++I  +  +   + K  Q+ + +    +   +  YN +I  LC   +   A  
Sbjct: 528 SPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID 587

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
               +  +     +  YT +IK   +EG   +A     ++  +G
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 267/562 (47%), Gaps = 26/562 (4%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           VV+ NA+++ YC+ G    A+ L        + P+A+++  ++ GLC  G + +ALE  +
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRL---AAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           +M   G  P    Y ++ +          + +V++ +  KG   D     +++   C+ G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            V+E + L   +   G + ++++Y+ +L  +C + R  +   L+ EM  V   P++VT++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            LI  LC+     +  ++  +M     +P+   +  I+ G+C++  +  A    + +   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
               +VV YN ++ G        EA +L  ++ +K      VTFN L+  FC+NG V   
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             LL+ +  HG  P  +TYTT +N +C+EG I   + LL+ M +    P  V+YT+V+KG
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LC   +  +A +L+  M   G  P+ +T+NT+I   CK   + +A +LL QM ++   P 
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             +Y+ +IDGL   G  + A  LL  +    IS   + Y++I  A   EG V+K +    
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI---- 551

Query: 578 QMVEKGFEISIR-------------------DYTKSFFCMMLSNGFPPDQEICEVMLIAF 618
           QM +   + +IR                   D    FF  M+SNG  P++    +++   
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 619 HQGGDLGSVFELAAVMIKSGLL 640
              G      EL + +   G L
Sbjct: 612 ASEGLAKEAQELLSELCSRGAL 633



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 205/458 (44%), Gaps = 18/458 (3%)

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           +V Y  ++ GYC+ G +    +L   +       N   +  ++  +C  GRI +AL +L 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           EM   G  P    Y +++   C+      ++++   M +K  + ++     +L  +CE+ 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            + EA      L    C  D+V YN ++ G       G+  +L  +++    +P+IVTFN
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           +LI   C+NG       +L  +  HG  P    Y T ++  C+EG+++    +L  M + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P  V Y  V+KGLC   + +EA +LL +M+      D +T+N ++  FC+   + + 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            +LL QM  H   P   TY  +I+G C  G +  A  LL S+         V+YT ++K 
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MMLSNGFPPD 607
            C+ G    A     QM+++G   +   +    +F C              ML NG  PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                 ++    + G      EL  VM+  G+ P+  +
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 40/233 (17%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           + + G++ +AV ++  M     K +  +Y  +L  L    R  D   +L   +     P 
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE-ELMSQMIQQGCPP 459

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T + +I+ LC++  ++ AI  L++       P ++S + ++    K G  E A  L 
Sbjct: 460 NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519

Query: 122 CLMLKYGLHP-----------------------------------DAFSYNILIHGLCIA 146
            +M+  G+ P                                   DA  YN +I  LC  
Sbjct: 520 NVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKR 579

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
              + A++F   M  +G  P+  TY++L KG         A +++ +L  +G+
Sbjct: 580 WETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA 632


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 254/524 (48%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N YT   V+ GLC + R+ DA+  L E + K   P     + I+   C+ G    +  
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   M   G   D  + N++++ +C  G ++EA+     +   G E D ++Y+ + KG  
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           +  +     +++ +++     P+IVT+  LI   C+ G  E   ++   M   G   ++ 
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ ++  +CK G ++ A  +L  M + GLKP++V Y+ +++GLC  ++  +A +L +EM
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K    +      ++   C+  ++       + ++   C+ DV+ Y  +I+G+ K G I
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EAV L + +      P+ V++  ++ G C  G+  DA  L+  +   G  P+ VT+ T 
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N  C++G +++ + LL++M      P  ++Y+ VI GL K  K +EA++LL  M   G+
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +P+ I Y++I  +  +   + K  Q+ + +    +   +  YN +I  LC   +   A  
Sbjct: 528 SPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID 587

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
               +  +     +  YT +IK   +EG   +A     ++  +G
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 267/562 (47%), Gaps = 26/562 (4%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           VV+ NA+++ YC+ G    A+ L        + P+A+++  ++ GLC  G + +ALE  +
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRL---AAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           +M   G  P    Y ++ +          + +V++ +  KG   D     +++   C+ G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            V+E + L   +   G + ++++Y+ +L  +C + R  +   L+ EM  V   P++VT++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            LI  LC+     +  ++  +M     +P+   +  I+ G+C++  +  A    + +   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
               +VV YN ++ G        EA +L  ++ +K      VTFN L+  FC+NG V   
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             LL+ +  HG  P  +TYTT +N +C+EG I   + LL+ M +    P  V+YT+V+KG
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LC   +  +A +L+  M   G  P+ +T+NT+I   CK   + +A +LL QM ++   P 
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             +Y+ +IDGL   G  + A  LL  +    IS   + Y++I  A   EG V+K +    
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI---- 551

Query: 578 QMVEKGFEISIR-------------------DYTKSFFCMMLSNGFPPDQEICEVMLIAF 618
           QM +   + +IR                   D    FF  M+SNG  P++    +++   
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 619 HQGGDLGSVFELAAVMIKSGLL 640
              G      EL + +   G L
Sbjct: 612 ASEGLAKEAQELLSELCSRGAL 633



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 205/458 (44%), Gaps = 18/458 (3%)

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           +V Y  ++ GYC+ G   +    R +  +     N   +  ++  +C  GRI +AL +L 
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           EM   G  P    Y +++   C+      ++++   M +K  + ++     +L  +CE+ 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            + EA      L    C  D+V YN ++ G       G+  +L  +++    +P+IVTFN
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           +LI   C+NG       +L  +  HG  P    Y T ++  C+EG+++    +L  M + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P  V Y  V+KGLC   + +EA +LL +M+      D +T+N ++  FC+   + + 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            +LL QM  H   P   TY  +I+G C  G +  A  LL S+         V+YT ++K 
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MMLSNGFPPD 607
            C+ G    A     QM+++G   +   +    +F C              ML NG  PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                 ++    + G      EL  VM+  G+ P+  +
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 40/233 (17%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           + + G++ +AV ++  M     K +  +Y  +L  L    R  D   +L   +     P 
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE-ELMSQMIQQGCPP 459

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T + +I+ LC++  ++ AI  L++       P ++S + ++    K G  E A  L 
Sbjct: 460 NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519

Query: 122 CLMLKYGLHP-----------------------------------DAFSYNILIHGLCIA 146
            +M+  G+ P                                   DA  YN +I  LC  
Sbjct: 520 NVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKR 579

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
              + A++F   M  +G  P+  TY++L KG         A +++ +L  +G+
Sbjct: 580 WETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA 632


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 173/673 (25%), Positives = 303/673 (45%), Gaps = 95/673 (14%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKV-SIQTYNSLLYNL---RHTDIMWDLYDDIKVSETP 60
            Y+  G+V  A+ V   + +L   + S    NSLL  L   R  +    LYD++   +  
Sbjct: 142 AYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNG 201

Query: 61  RNV----YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
            ++    YT SI++ GLC + R++D I  ++   GK   P++V  N ++  YCK G  E 
Sbjct: 202 DDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVES 261

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  +   G  P   ++  L++G C  G  E       +M   G+  +   Y+ +  
Sbjct: 262 AYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIID 321

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
             + L     A   ++++     +PD+VTY  LI  +C  G VEE  KL E  + +G   
Sbjct: 322 ARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAP 381

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N + Y+ L+   CK G   +A   L EM   GL+ D+++Y  LI GL    +V  A+ + 
Sbjct: 382 NKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIR 441

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           + M ++ I P++  +  ++ GL +K  ++ A++    ++  N   D  +Y  ++DG+++ 
Sbjct: 442 DRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRH 501

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA-------RR---------- 399
           GN+ EA +L++ +IEK + P +V +N +I GF K+G + +A       RR          
Sbjct: 502 GNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTF 561

Query: 400 --LLD----------TIKLHGL------EPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
             ++D           +K+ GL      +P+ VTYT+ +N YC +G  +    L   M +
Sbjct: 562 STIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRS 621

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT---------------- 485
             + P+ VTY+++I   CK+ KL +AV   E M +   TP+                   
Sbjct: 622 HGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAV 681

Query: 486 ---------------------------------YNTIIRSFCKCKDLRKAFQLLNQMWLH 512
                                            YN I+   C+ + ++ A QL N+M   
Sbjct: 682 SREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAF 741

Query: 513 NLEPTSATYNILIDGLCVNGDLKN-ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
            L   + ++  LI G+C+ G+ K   + +   L E  + +  + Y+  +     EG + +
Sbjct: 742 GLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIA-LKYSLELDKFIPEGGISE 800

Query: 572 AMTFFCQMVEKGF 584
           A      M+ KG+
Sbjct: 801 ASGILQAMI-KGY 812



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/580 (25%), Positives = 266/580 (45%), Gaps = 33/580 (5%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG----LHPDAFSYNILIHGLCIAGSMEE 151
           PS  + N++++   K    E A  L+  M+       +  D ++ +I++ GLC+ G +E+
Sbjct: 167 PSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIED 226

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
            ++        G  P+ + Y+ L  G+    ++  A+K+ +KL +KG  P + T+  L+ 
Sbjct: 227 GIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVN 286

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           G+C++G  E    L   M  +G  +NV  Y+ ++ +  K G   +A   L EM     +P
Sbjct: 287 GFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEP 346

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           DLVTY+ LI   C + +V +A +L  +   + ++PN   +  ++ G C++   T+A  Y 
Sbjct: 347 DLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYL 406

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             +  S    D++ Y  +I G V  G +  A+ +  +++ + I P    +N L+ G  K 
Sbjct: 407 IEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKK 466

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           GK++ A+ +L  +    + P A  Y T ++ +   GN+     L Q +  K + P  V Y
Sbjct: 467 GKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGY 526

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            V+IKG  K   +  A+  ++ M      PD  T++TII  + K  ++    ++   M  
Sbjct: 527 NVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVK 586

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
            N +P   TY  LI+G C  G+ K A+ L   ++ H +  + V Y+ +I + C E  + K
Sbjct: 587 QNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGK 646

Query: 572 AMTFF-------CQMVEKGFEISIRDYTKS----------------------FFCMMLSN 602
           A+++F       C   +  F   +  +T +                      FF  M+ +
Sbjct: 647 AVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGD 706

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           G+         +LI   Q   + +  +L   M+  GL  D
Sbjct: 707 GWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSD 746



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 127/536 (23%), Positives = 216/536 (40%), Gaps = 99/536 (18%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + + GM      ++ +MK+  L V++Q YN+++      D  + L  DIK  +T + +  
Sbjct: 288 FCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNII------DARYKLGFDIKAKDTLKEMSE 341

Query: 66  N---------SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           N         + +I+  C +  +++A   L++T  +   P+ ++   ++  YCK G    
Sbjct: 342 NCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTK 401

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV------------ 164
           A      M   GL  D  SY  LIHGL +AG ++ AL   + M   G+            
Sbjct: 402 ATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMN 461

Query: 165 -----------------------EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
                                   PDA  Y+ L  GF     +  A K+ Q ++ KG DP
Sbjct: 462 GLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDP 521

Query: 202 DIVTYTVLICGYCQIG-----------------------------------NVEEGLKLR 226
            +V Y V+I G+ + G                                   N+   LK+ 
Sbjct: 522 GVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIF 581

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
            +M+ Q  K NV+ Y+ L++  C+ G    A  L   M + GLKP +VTYSILI   CK+
Sbjct: 582 GLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKE 641

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM--------------YFD 332
            K+ KA+  +  M   + +PN  A   ++ G    +    +R               +F 
Sbjct: 642 AKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFS 701

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +I     Q    YN ++    +   +  A+QL  +++   +    V+F +LI+G C  G
Sbjct: 702 RMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEG 761

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
              + R ++      G    A+ Y+  ++ +  EG I     +LQ M    + P  
Sbjct: 762 NSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQ 817



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 192/445 (43%), Gaps = 60/445 (13%)

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLK-PDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           A S +L +    G +D+AL + + +  +    P     + L+  L K  ++  A QLY+E
Sbjct: 135 ALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDE 194

Query: 299 MCSKR----ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           M  +     I  +++    ++ GLC K  I +     +S     C+ ++V YN +IDGY 
Sbjct: 195 MIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYC 254

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG---------------------- 392
           K G +  A +L+++L  K   P++ TF SL+ GFCK G                      
Sbjct: 255 KKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQ 314

Query: 393 ---KVADARRLL-------DTIKLHG---LEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
               + DAR  L       DT+K       EP  VTY T +N +C  G ++    LL++ 
Sbjct: 315 MYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQT 374

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
             + + P  +TYT ++ G CKQ +  +A   L +M   G+  D I+Y  +I       ++
Sbjct: 375 IRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEV 434

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
             A  + ++M    + P +  YN+L++GL   G L  A  +L  + + NI+     Y T+
Sbjct: 435 DTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATL 494

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
           +      G++                    D  K  F +++  G  P      VM+  F 
Sbjct: 495 VDGFIRHGNL--------------------DEAKKLFQLIIEKGLDPGVVGYNVMIKGFS 534

Query: 620 QGGDLGSVFELAAVMIKSGLLPDKF 644
           + G + +       M ++  +PD F
Sbjct: 535 KSGMMDNAILCIDKMRRAHHVPDIF 559



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 175/392 (44%), Gaps = 28/392 (7%)

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKV---HKAIQLYNEMCSKRIS-PNSFAHGAILLG 317
           + +E +  K  + T   L   LC    V    KA+++Y+ +     S P+++A  ++L  
Sbjct: 119 FTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNL 178

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYN----IMIDGYVKLGNIGEAVQLYRQLIEKR 373
           L +   I  A   +D +I  +   D+ + N    IM+ G    G I + ++L      K 
Sbjct: 179 LVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKG 238

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
             P+IV +N+LI G+CK G+V  A +L   +K+ G  P+  T+ + +N +C+ G  + + 
Sbjct: 239 CVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAID 298

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            LL EM+ + +      Y  +I    K     +A   L++M      PD +TYNT+I  F
Sbjct: 299 LLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHF 358

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C   ++ +A +LL Q     L P   TY  L+ G C  G+   A   L+ +    + +  
Sbjct: 359 CSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDM 418

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEV 613
           ++Y  +I      G+V  A+T             IRD        M++ G  PD  I  V
Sbjct: 419 ISYGALIHGLVVAGEVDTALT-------------IRD-------RMMNRGILPDANIYNV 458

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           ++    + G L     +   M+   + PD F+
Sbjct: 459 LMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFV 490



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 100/440 (22%), Positives = 189/440 (42%), Gaps = 53/440 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y + G    A   + +M    L+V + +Y +L++ L      D    + D +       +
Sbjct: 393 YCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPD 452

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
               +++++GL ++ +L  A + L E   +   P       ++  + + G  + AK LF 
Sbjct: 453 ANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQ 512

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           L+++ GL P    YN++I G   +G M+ A+   + M R    PD  T+S +  G+    
Sbjct: 513 LIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQH 572

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            ++   K+   ++ +   P++VTYT LI GYC+ G  +   KL  +M S G K +V+ YS
Sbjct: 573 NMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYS 632

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG-------------------- 282
           +L+ S CK  ++ +A+     M      P+   +  L+ G                    
Sbjct: 633 ILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENS 692

Query: 283 -----------------------------LCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
                                        LC+Q  V  A+QL N+M +  +  ++ +  A
Sbjct: 693 RSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVA 752

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++ G+C +    E R      +    +Q  + Y++ +D ++  G I EA  + + +I+  
Sbjct: 753 LIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGY 812

Query: 374 ISPSIVTFNSLIYGFCKNGK 393
           +SP+    N+L     +NGK
Sbjct: 813 VSPN-QDLNNLKEPNMENGK 831


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 264/559 (47%), Gaps = 24/559 (4%)

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGL--HPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
           A++    K    + AK +  LM K  +   P+AF Y ++ +    AG +  A+     M 
Sbjct: 139 AMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSR--AGKLRNAMRVLTMMQ 196

Query: 161 RHGVEPDAITYSILAKGFHLL---SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           + G+EPD    SI     H+L   +++  A + ++++ I   +P+++TY  LI GYC + 
Sbjct: 197 KAGIEPD---LSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLH 253

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTY 276
            +E+ ++L   M  +G   + I+Y  ++  +CK  RI E   L+ +M +   L PD VTY
Sbjct: 254 RLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTY 313

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +  +  L K     +A++   E   +R   +   + AI+   C +  + +A+   + +  
Sbjct: 314 NTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFS 373

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
             CI DVV Y  +I+G  +   + +A ++ RQ+ +    P+ V++ +L+ G CKNG   +
Sbjct: 374 KGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLE 433

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           AR +++  +     P+A+TY+  M+ +  EG       L++EM  K   PT V   ++I+
Sbjct: 434 AREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQ 493

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
            LC++ K+ EA + +E     G   + + + T+I  FC+  DL  A  LL+ M+L N  P
Sbjct: 494 SLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHP 553

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV------- 569
              TY  +ID L   G ++ A  L + +    +  T V Y T+I  +C  G V       
Sbjct: 554 DVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLL 613

Query: 570 ------HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
                  +  T + Q++EK       +        +L      D   C +++ ++   G 
Sbjct: 614 EKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGI 673

Query: 624 LGSVFELAAVMIKSGLLPD 642
               + +A  M    L+PD
Sbjct: 674 PLMSYNVACRMFNRNLIPD 692



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 261/546 (47%), Gaps = 6/546 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           YSR G + +A+ V+  M++  ++  +   N+ ++ L      D      + +++ E   N
Sbjct: 179 YSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPN 238

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +I G C   RL+DA+  + E   K   P  +S   +M   CK    +  + L  
Sbjct: 239 VITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLME 298

Query: 123 LMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            MLK   L PD  +YN  +H L   G  +EALEF  +        D + YS +   F   
Sbjct: 299 KMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCRE 358

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A +++ ++  KG  PD+VTYT +I G CQ   V++  K+   M   G K N ++Y
Sbjct: 359 GRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSY 418

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL+ +CK+G   EA  ++   E     P+ +TYS+L+ G  ++ K  +A  L  EM  
Sbjct: 419 TALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIK 478

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   P       ++  LC++E + EA+ + +  + + C  +VV +  +I G+ +  ++  
Sbjct: 479 KGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEA 538

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ L   +      P +VT+ ++I    K G++ +A +L   +   GL P+ VTY T ++
Sbjct: 539 ALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIH 598

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC  G ++ LL LL++M ++        Y  VI+ LC    L++A +LL  +       
Sbjct: 599 QYCRMGRVEDLLKLLEKMLSRQ--ECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKI 656

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D  T + +I S+        ++ +  +M+  NL P       +   L + G  + AD L+
Sbjct: 657 DANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLI 716

Query: 542 VSLQEH 547
           +   E 
Sbjct: 717 LRFVER 722



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 113/480 (23%), Positives = 228/480 (47%), Gaps = 29/480 (6%)

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           D I Y  + +         GA +V++ +  +  +     +  ++  Y + G +   +++ 
Sbjct: 133 DPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVL 192

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
            +M   G + ++   +  +  +    R+D+A+  L  M+ V ++P+++TY+ LI+G C  
Sbjct: 193 TMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDL 252

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM-SNCIQDVVL 345
            ++  A++L  EM  K  SP+  ++  ++  LC+++ I E R+  + ++  SN + D V 
Sbjct: 253 HRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVT 312

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN  +    K G+  EA++  R+  E+R     V ++++++ FC+ G++  A+ +++ + 
Sbjct: 313 YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 372

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             G  P  VTYT+ +N  C+E  + +   +L++M      P  V+YT ++ GLCK     
Sbjct: 373 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSL 432

Query: 466 EAVQLL----EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
           EA +++    ED ++    P+ ITY+ ++  F +     +A  L+ +M      PT    
Sbjct: 433 EAREMMNMSEEDWWI----PNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEI 488

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N+LI  LC    +  A   +     +  ++  V +TT+I   C + D+  A++    M  
Sbjct: 489 NLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY- 547

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                             LSN   PD      ++ A  + G +    +LA  M++ GL+P
Sbjct: 548 ------------------LSNKH-PDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIP 588


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 227/460 (49%), Gaps = 5/460 (1%)

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
            LCQ +R+  A   L E A K   P  V+   I+S  CKL   + A  +   M      P
Sbjct: 145 ALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PP 199

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
            A SYN ++  LC    M+E     +DM   G++P+ ITY+ +   F    ++  A  ++
Sbjct: 200 VAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAIL 259

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            +++I G  P++VT+T L+ G    G V + L +   M+++G+  + ++Y++L+  +C  
Sbjct: 260 ARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSV 319

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G +  A  +L  ME  G  P++ TYS LI G  K   +  AI ++N+M      PN   +
Sbjct: 320 GDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVY 379

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++   C+K M  +A+   D +++ NC  + V +N +I        +G A+ ++ ++  
Sbjct: 380 TNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRR 439

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
               P+  T+N LI+G  + G   DA  ++  ++ HG+E S VTY T ++  C+    + 
Sbjct: 440 HGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSRE 499

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            +  + +M  + I P   T++ +I   CK+ +++ A  +L  M V+    + + Y  ++ 
Sbjct: 500 AMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMA 559

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
             C    L  A   L +M    + P + T+N+L+ G+  N
Sbjct: 560 ELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRN 599



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 233/468 (49%), Gaps = 12/468 (2%)

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
            LC    +  A +  ++M R G  PD +TY+ +      L ++  A +V+  +      P
Sbjct: 145 ALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PP 199

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
              +Y  ++   C+   ++E   +   M+ +G + NVI Y+ ++ + CK+G +  A  +L
Sbjct: 200 VAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAIL 259

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
             M   G  P++VT++ L+RGL    +VH A+ ++  M ++  +P++ ++  ++ GLC  
Sbjct: 260 ARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSV 319

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             +  A    +S+    C  +V  Y+ +IDG+ K G++G A+ ++  +      P++V +
Sbjct: 320 GDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVY 379

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
            +++  FCK      A+ L+D + L    P+ VT+ T + + C+   + R L +  EM  
Sbjct: 380 TNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRR 439

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
               P   TY  +I GL ++    +A+ ++ +M   G+    +TYNT++   C+ +  R+
Sbjct: 440 HGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSRE 499

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A   + +M +  ++P + T++ +I   C  G+++ A  +L ++   N     + YT ++ 
Sbjct: 500 AMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMA 559

Query: 562 AHCAEGDVHKAMTFFCQMVEKG-------FEISIRDYTKSFFCMMLSN 602
             C +  +  AMT+  +M+ +G       + + +R   ++  C+  S+
Sbjct: 560 ELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSD 607



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 198/455 (43%), Gaps = 48/455 (10%)

Query: 16  VFVIAKMKELDLKVSI--------QTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
           V V+ K+  LD    +         +YN+++  L    R  ++   + D +     P NV
Sbjct: 178 VSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQP-NV 236

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + ++D  C+   L+ A   L         P+VV+  A++      G    A  ++  
Sbjct: 237 ITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRW 296

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G  P   SYNILI GLC  G ++ A    N M +HG  P+  TYS L  GF     
Sbjct: 297 MVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGD 356

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           + GA  +   +   G  P++V YT ++  +C+     +   L + ML +    N + ++ 
Sbjct: 357 LGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNT 416

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+ S+C   R+  ALG+ +EM   G  P+  TY+ LI GL ++     A+ +  EM S  
Sbjct: 417 LIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHG 476

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I  +   +  ++ GLC+  M  EA ++   +I+                           
Sbjct: 477 IELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQG------------------------- 511

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
                     I P+  TF+++I+ +CK G+V  A  +L  + +     + + YT  M   
Sbjct: 512 ----------IQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAEL 561

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           C +  +   +  L +M  + I P  VT+ V+++G+
Sbjct: 562 CNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 596



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 132/312 (42%), Gaps = 55/312 (17%)

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
           +  C+N +V  AR++LD +   G  P  VTY T ++  C+   +     +L  M      
Sbjct: 144 WALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP----- 198

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P   +Y  ++  LC+++++QE   ++ DM   G+ P+ ITY TI+ +FCK  +LR A  +
Sbjct: 199 PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI 258

Query: 506 LNQM---------------------------------WL--HNLEPTSATYNILIDGLCV 530
           L +M                                 W+      P++ +YNILI GLC 
Sbjct: 259 LARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCS 318

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            GDLK A  +L S+++H        Y+T+I      GD+  A++ +  M   G + ++  
Sbjct: 319 VGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVV 378

Query: 591 YT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
           YT               KS    ML    PP+      ++ +      +G    +   M 
Sbjct: 379 YTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMR 438

Query: 636 KSGLLPDKFLIN 647
           + G +P+    N
Sbjct: 439 RHGCVPNGRTYN 450



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 32/170 (18%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           R G   DA+ ++ +M+   +++S+ TYN+                               
Sbjct: 458 REGNCGDALHMVTEMQSHGIELSLVTYNT------------------------------- 486

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
            V+ GLCQ    ++A++F+ +   +   P+  + +AI+  YCK G   +A  +   M   
Sbjct: 487 -VVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVV 545

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             H +   Y IL+  LC    + +A+ +   M   G+ P+ +T+++L +G
Sbjct: 546 NCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRG 595


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 159/582 (27%), Positives = 267/582 (45%), Gaps = 9/582 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
           R GM  DAV +  +M    +K   + Y    S L  LR  D    +   ++ +       
Sbjct: 197 RGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWEL 256

Query: 65  TNSIVIDGLCQQSRLQDAILFLQE---TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           T S V+D L +  R+ +A+    +     GK+    VV    +M  YC  G    A  LF
Sbjct: 257 TYSSVVDVLVKVGRMDEALRLKDQMLLATGKKM--DVVLATMLMHGYCLHGEVGKALDLF 314

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ++  G+ P   +Y +LI G    G  +E  +    M   G+      ++++ KG    
Sbjct: 315 DEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRD 374

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A  +++ L++    PD+ TY  LI   C+   + E + L + M   G K +++ Y
Sbjct: 375 KRWKDAIGLLE-LVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTY 433

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
             LL   C+ GR+DEAL L  EM   G  P+ VTY+ L++G  K+     A  L NEM  
Sbjct: 434 HSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQ 493

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +S   + +  ++ GL     + E        +    +   + YN +I+G+VK G +G 
Sbjct: 494 NGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGS 553

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A  +YRQ+ +K I+P+IVT+ S I G+C+      A +LL  ++  G++P    Y  F++
Sbjct: 554 AFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFID 613

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C++GN+ R L  L  +    + P    Y   + G      + EA +    M    V  
Sbjct: 614 TFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVA 673

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D   Y T+I  F K  ++  A +L ++M  +++ P   T+  L  GLC +GD+  A  LL
Sbjct: 674 DTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLL 733

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             ++  ++S   V Y  +I A   +G + +A     +M+  G
Sbjct: 734 DDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSG 775



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/564 (26%), Positives = 266/564 (47%), Gaps = 19/564 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME-EALE 154
           P   S   ++    +   A  A  LF  M   G + DA  Y+++I   C+ G M  +A+ 
Sbjct: 148 PDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRA-CVRGGMHCDAVR 206

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
             ++M   GV+PD   Y+I   G   L     A +V+ K+   G +P  +TY+ ++    
Sbjct: 207 LFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLV 266

Query: 215 QIGNVEEGLKLREVML-SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           ++G ++E L+L++ ML + G K++V+  ++L+   C  G + +AL L  E+ + G+ P  
Sbjct: 267 KVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTN 326

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VTY +LI+G   +    +  +L  +M  + +  +++    ++ GL   +   +A    + 
Sbjct: 327 VTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLE- 385

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L++   + DV  Y  +I    K   + EAV L+ ++ E  + PSIVT++SL+ G+C+ G+
Sbjct: 386 LVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGR 445

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + +A +L   +   G  P+ VTYTT M  Y ++       ALL EM    +     TY +
Sbjct: 446 MDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNI 505

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I GL    ++ E  ++L+     G  P  +TYN+II  F K   +  AF +  QM    
Sbjct: 506 LINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKG 565

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           + P   TY   IDG C       A  LL+ ++   I     AY   I   C +G++ +A+
Sbjct: 566 ITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRAL 625

Query: 574 TFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAF 618
            F   +++ G    +  Y                  F+  M+      D EI   ++  F
Sbjct: 626 HFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGF 685

Query: 619 HQGGDLGSVFELAAVMIKSGLLPD 642
            + G++    EL + M+ + ++PD
Sbjct: 686 SKVGNVAFALELYSEMMANHVIPD 709



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 225/451 (49%), Gaps = 6/451 (1%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYN----SLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           GM  +   +  +M E  L +S   +N     LL + R  D +  L  ++ V     +V+T
Sbjct: 340 GMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLL--ELVVDTGVPDVFT 397

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
              +I  LC+  +L +A+    +       PS+V+ ++++  YC+ G  + A  L+  M 
Sbjct: 398 YGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMP 457

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G  P+  +Y  L+ G     + + A    N+M ++GV     TY+IL  G ++++++ 
Sbjct: 458 DKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVC 517

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
              +++++ L +G  P  +TY  +I G+ + G +     +   M  +G   N++ Y+  +
Sbjct: 518 EVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFI 577

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              C++   D A+ LL  +   G++PD+  Y+  I   CKQ  + +A+     +    ++
Sbjct: 578 DGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLT 637

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+   + + + G    +M+ EA  ++ S+I    + D  +Y  +IDG+ K+GN+  A++L
Sbjct: 638 PDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALEL 697

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           Y +++   + P   TF +L +G C++G +  A+RLLD ++   + P+ VTY   +NA   
Sbjct: 698 YSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVR 757

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           +G +Q    L  EM +  + P   TY ++ +
Sbjct: 758 DGKLQEAFQLHDEMLSSGVVPDDTTYDILPR 788



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 210/431 (48%), Gaps = 1/431 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + Y  ++VI GL +  R +DAI  L+        P V +   ++   CK      A  L+
Sbjct: 360 STYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLW 418

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+ P   +Y+ L+ G C  G M+EAL+  ++M   G  P+ +TY+ L KG+   
Sbjct: 419 DKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKK 478

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
                A+ ++ ++   G      TY +LI G   +  V E  ++ +  LS+GF    + Y
Sbjct: 479 KAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTY 538

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +++   K+G +  A G+  +M   G+ P++VTY+  I G C+ +    A++L   +  
Sbjct: 539 NSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRR 598

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             I P+  A+ A +   C++  ++ A  +   L+      DV +YN  + GY  L  + E
Sbjct: 599 DGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAE 658

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A + Y  +I++R+      + +LI GF K G VA A  L   +  + + P   T+T   +
Sbjct: 659 ASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTH 718

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C  G+I     LL +M    + P  VTY ++I    +  KLQEA QL ++M   GV P
Sbjct: 719 GLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVP 778

Query: 482 DQITYNTIIRS 492
           D  TY+ + R+
Sbjct: 779 DDTTYDILPRT 789



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/544 (25%), Positives = 242/544 (44%), Gaps = 54/544 (9%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           +  M+  G+ PDA S   L+       S  +AL   ++M   G   DA  Y ++ +    
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
                 A ++  ++   G  PD   Y + I G C++ + +  L++   M   GF+   + 
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 241 YSVLLSSMCKSGRIDEALGLLYEME-AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           YS ++  + K GR+DEAL L  +M  A G K D+V  ++L+ G C   +V KA+ L++E+
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            S  ++P +                                   V Y ++I G    G  
Sbjct: 318 VSDGVTPTN-----------------------------------VTYGVLIKGCDAEGMS 342

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            E  +L RQ+IE+ +  S   FN +I G  ++ +  DA  LL+ +   G+ P   TY   
Sbjct: 343 DETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCL 401

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C+   +   + L  +M+   + P+ VTY  ++ G C++ ++ EA++L  +M   G 
Sbjct: 402 IHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGF 461

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+++TY T+++ + K K    A+ LLN+M  + +     TYNILI+GL +   +   D 
Sbjct: 462 PPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDE 521

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF---F 596
           +L          T + Y +II      G +  A   + QM +KG   +I  YT SF   +
Sbjct: 522 MLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYT-SFIDGY 580

Query: 597 CM-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           C              +  +G  PD       +  F + G++        +++K GL PD 
Sbjct: 581 CRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDV 640

Query: 644 FLIN 647
            + N
Sbjct: 641 TVYN 644


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 254/524 (48%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N YT   V+ GLC + R+ DA+  L E + K   P     + I+   C+ G    +  
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   M   G   D  + N++++ +C  G ++EA+     +   G E D ++Y+ + KG  
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           +  +     +++ +++     P+IVT+  LI   C+ G  E   ++   M   G   ++ 
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ ++  +CK G ++ A  +L  M + GLKP++V Y+ +++GLC  ++  +A +L +EM
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K    +      ++   C+  ++       + ++   C+ DV+ Y  +I+G+ K G I
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EAV L + +      P+ V++  ++ G C  G+  DA  L+  +   G  P+ VT+ T 
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N  C++G +++ + LL++M      P  ++Y+ VI GL K  K +EA++LL  M   G+
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +P+ I Y++I  +  +   + K  Q+ + +    +   +  YN +I  LC   +   A  
Sbjct: 528 SPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID 587

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
               +  +     +  YT +IK   +EG   +A     ++  +G
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 267/562 (47%), Gaps = 26/562 (4%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           VV+ NA+++ YC+ G    A+ L        + P+A+++  ++ GLC  G + +ALE  +
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRL---AAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           +M   G  P    Y ++ +          + +V++ +  KG   D     +++   C+ G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            V+E + L   +   G + ++++Y+ +L  +C + R  +   L+ EM  V   P++VT++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            LI  LC+     +  ++  +M     +P+   +  I+ G+C++  +  A    + +   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
               +VV YN ++ G        EA +L  ++ +K      VTFN L+  FC+NG V   
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             LL+ +  HG  P  +TYTT +N +C+EG I   + LL+ M +    P  V+YT+V+KG
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LC   +  +A +L+  M   G  P+ +T+NT+I   CK   + +A +LL QM ++   P 
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             +Y+ +IDGL   G  + A  LL  +    IS   + Y++I  A   EG V+K +    
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI---- 551

Query: 578 QMVEKGFEISIR-------------------DYTKSFFCMMLSNGFPPDQEICEVMLIAF 618
           QM +   + +IR                   D    FF  M+SNG  P++    +++   
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 619 HQGGDLGSVFELAAVMIKSGLL 640
              G      EL + +   G L
Sbjct: 612 ASEGLAKEAQELLSELCSRGAL 633



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 205/458 (44%), Gaps = 18/458 (3%)

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           +V Y  ++ GYC+ G   +    R +  +     N   +  ++  +C  GRI +AL +L 
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           EM   G  P    Y +++   C+      ++++   M +K  + ++     +L  +CE+ 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            + EA      L    C  D+V YN ++ G       G+  +L  +++    +P+IVTFN
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           +LI   C+NG       +L  +  HG  P    Y T ++  C+EG+++    +L  M + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P  V Y  V+KGLC   + +EA +LL +M+      D +T+N ++  FC+   + + 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            +LL QM  H   P   TY  +I+G C  G +  A  LL S+         V+YT ++K 
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MMLSNGFPPD 607
            C+ G    A     QM+++G   +   +    +F C              ML NG  PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                 ++    + G      EL  VM+  G+ P+  +
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 40/233 (17%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           + + G++ +AV ++  M     K +  +Y  +L  L    R  D   +L   +     P 
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD-AEELMSQMIQQGCPP 459

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T + +I+ LC++  ++ AI  L++       P ++S + ++    K G  E A  L 
Sbjct: 460 NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519

Query: 122 CLMLKYGLHP-----------------------------------DAFSYNILIHGLCIA 146
            +M+  G+ P                                   DA  YN +I  LC  
Sbjct: 520 NVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKR 579

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
              + A++F   M  +G  P+  TY++L KG         A +++ +L  +G+
Sbjct: 580 WETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA 632


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 254/524 (48%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P N YT   V+ GLC + R+ DA+  L E + K   P     + I+   C+ G    +  
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   M   G   D  + N++++ +C  G ++EA+     +   G E D ++Y+ + KG  
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           +  +     +++ +++     P+IVT+  LI   C+ G  E   ++   M   G   ++ 
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ ++  +CK G ++ A  +L  M + GLKP++V Y+ +++GLC  ++  +A +L +EM
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K    +      ++   C+  ++       + ++   C+ DV+ Y  +I+G+ K G I
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EAV L + +      P+ V++  ++ G C  G+  DA  L+  +   G  P+ VT+ T 
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N  C++G +++ + LL++M      P  ++Y+ VI GL K  K +EA++LL  M   G+
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +P+ I Y++I  +  +   + K  Q+ + +    +   +  YN +I  LC   +   A  
Sbjct: 528 SPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAID 587

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
               +  +     +  YT +IK   +EG   +A     ++  +G
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 267/562 (47%), Gaps = 26/562 (4%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           VV+ NA+++ YC+ G    A+ L        + P+A+++  ++ GLC  G + +ALE  +
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRL---AAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           +M   G  P    Y ++ +          + +V++ +  KG   D     +++   C+ G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            V+E + L   +   G + ++++Y+ +L  +C + R  +   L+ EM  V   P++VT++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            LI  LC+     +  ++  +M     +P+   +  I+ G+C++  +  A    + +   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
               +VV YN ++ G        EA +L  ++ +K      VTFN L+  FC+NG V   
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             LL+ +  HG  P  +TYTT +N +C+EG I   + LL+ M +    P  V+YT+V+KG
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LC   +  +A +L+  M   G  P+ +T+NT+I   CK   + +A +LL QM ++   P 
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             +Y+ +IDGL   G  + A  LL  +    IS   + Y++I  A   EG V+K +    
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI---- 551

Query: 578 QMVEKGFEISIR-------------------DYTKSFFCMMLSNGFPPDQEICEVMLIAF 618
           QM +   + +IR                   D    FF  M+SNG  P++    +++   
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 619 HQGGDLGSVFELAAVMIKSGLL 640
              G      EL + +   G L
Sbjct: 612 ASEGLAKEAQELLSELCSRGAL 633



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 205/458 (44%), Gaps = 18/458 (3%)

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           +V Y  ++ GYC+ G   +    R +  +     N   +  ++  +C  GRI +AL +L 
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           EM   G  P    Y +++   C+      ++++   M +K  + ++     +L  +CE+ 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            + EA      L    C  D+V YN ++ G       G+  +L  +++    +P+IVTFN
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           +LI   C+NG       +L  +  HG  P    Y T ++  C+EG+++    +L  M + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P  V Y  V+KGLC   + +EA +LL +M+      D +T+N ++  FC+   + + 
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            +LL QM  H   P   TY  +I+G C  G +  A  LL S+         V+YT ++K 
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MMLSNGFPPD 607
            C+ G    A     QM+++G   +   +    +F C              ML NG  PD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                 ++    + G      EL  VM+  G+ P+  +
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 40/233 (17%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           + + G++ +AV ++  M     K +  +Y  +L  L    R  D   +L   +     P 
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD-AEELMSQMIQQGCPP 459

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T + +I+ LC++  ++ AI  L++       P ++S + ++    K G  E A  L 
Sbjct: 460 NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519

Query: 122 CLMLKYGLHP-----------------------------------DAFSYNILIHGLCIA 146
            +M+  G+ P                                   DA  YN +I  LC  
Sbjct: 520 NVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKR 579

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
              + A++F   M  +G  P+  TY++L KG         A +++ +L  +G+
Sbjct: 580 WETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA 632


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 153/568 (26%), Positives = 267/568 (47%), Gaps = 31/568 (5%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           NA++S YC+ G    A+ L        + P+A++Y  ++  LC  G + +AL   ++M R
Sbjct: 87  NAMVSGYCRAGQLASARRL---AASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRR 143

Query: 162 HGVEPDAITYSIL---AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC-QIG 217
            G  P    Y ++   A           A +V+Q L  +G   D+    +++   C Q G
Sbjct: 144 RGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGG 203

Query: 218 NVEEGLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           +V+E L+L R++  S G   +V++Y+ +L  +C + R      L+ EM  VG  P++VT+
Sbjct: 204 SVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTF 263

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + LI  LC+     +  Q+  +M     +P+   +  +L G+C++  +  A    D +  
Sbjct: 264 NTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS 323

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                +VV YN ++ G        +A +L  ++ +       VTFN L+  FC+NG V  
Sbjct: 324 YGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYR 383

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
              LL+ +  HG  P  +TYTT +N +C+EG I   + LL+ M      P  ++YT+V+K
Sbjct: 384 VIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLK 443

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLC   +  +A  L+  M   G +P+ +T+NT+I   CK   + +A +LL QM L+   P
Sbjct: 444 GLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSP 503

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              +Y+ +IDGL   G    A  LL  +    +S   + Y++I  A   EG +++ +   
Sbjct: 504 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVI--- 560

Query: 577 CQMVEKGFEISIR-------------------DYTKSFFCMMLSNGFPPDQEICEVMLIA 617
            QM +   +++IR                   D    F   M+S+G  P++    +++  
Sbjct: 561 -QMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRG 619

Query: 618 FHQGGDLGSVFELAAVMIKSGLLPDKFL 645
               G +    E+   +   G L   F+
Sbjct: 620 LASEGFVKEAQEMLTELCSKGALRKHFM 647



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 233/482 (48%), Gaps = 5/482 (1%)

Query: 68  IVIDGLCQQSR---LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA--EVAKGLFC 122
           ++++  C +      + A+  LQ+  G+     V + N +++  C  G +  E  + L  
Sbjct: 155 VILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRD 214

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           L   +G  PD  SYN ++ GLC+A       +   +M R G  P+ +T++ L        
Sbjct: 215 LPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNG 274

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
                 +V+ +++  G  PDI  Y  ++ G C+ G++E   ++ + M S G K NV+ Y+
Sbjct: 275 LFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYN 334

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            +L  +C + R ++A  LL EM       D VT++IL+   C+   V++ I+L  +M   
Sbjct: 335 TVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEH 394

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
              P+   +  ++ G C++ +I EA M   S+    C  + + Y I++ G        +A
Sbjct: 395 GCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDA 454

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L  Q+IE+  SP+ VTFN++I   CK G V  A  LL  + L+G  P  ++Y+T ++ 
Sbjct: 455 EDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDG 514

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
             + G     L LL  M  K + P  + Y+ +   L K+ ++   +Q+ +++  + +  D
Sbjct: 515 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSD 574

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            + YN +I S CK     +A + L  M      P  +TY ILI GL   G +K A  +L 
Sbjct: 575 AVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLT 634

Query: 543 SL 544
            L
Sbjct: 635 EL 636



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 216/413 (52%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V + + V+ GLC   R       ++E       P+VV+ N ++   C+ G  E    + 
Sbjct: 224 DVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVL 283

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+ +G  PD   Y  ++ G+C  G +E A E  + M  +G++P+ + Y+ + KG    
Sbjct: 284 AQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSA 343

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A +++ ++       D VT+ +L+  +CQ G V   ++L E ML  G   +VI Y
Sbjct: 344 ERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITY 403

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +++  CK G IDEA+ LL  M A G +P+ ++Y+I+++GLC  ++   A  L ++M  
Sbjct: 404 TTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIE 463

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +  SPN      ++  LC+K ++ +A      ++++ C  D++ Y+ +IDG  K G   E
Sbjct: 464 QGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDE 523

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A++L   ++ K +SP+ + ++S+     K G++    ++ D I+   +   AV Y   ++
Sbjct: 524 ALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVIS 583

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           + C+ G   R +  L  M +    P   TYT++I+GL  +  ++EA ++L ++
Sbjct: 584 SLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTEL 636



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 219/450 (48%), Gaps = 2/450 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKG 119
           +V   ++V++ +C Q    D  L L       FG  P VVS NA++   C        + 
Sbjct: 187 DVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQD 246

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M++ G  P+  ++N LI  LC  G  E   +    M  HG  PD   Y+ +  G  
Sbjct: 247 LMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVC 306

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               +  A +++ ++   G  P++V Y  ++ G C     E+  +L   M      L+ +
Sbjct: 307 KEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDV 366

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            +++L+   C++G +   + LL +M   G  PD++TY+ +I G CK+  + +A+ L   M
Sbjct: 367 TFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSM 426

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            +    PN+ ++  +L GLC  E   +A      +I   C  + V +N +I+   K G +
Sbjct: 427 AACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLV 486

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A++L +Q++    SP +++++++I G  K GK  +A  LL+ +   G+ P+ + Y++ 
Sbjct: 487 EQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 546

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
            +A  +EG I R++ +   ++   I    V Y  VI  LCK+     A++ L  M   G 
Sbjct: 547 ASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGC 606

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            P++ TY  +IR       +++A ++L ++
Sbjct: 607 MPNESTYTILIRGLASEGFVKEAQEMLTEL 636



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 165/328 (50%), Gaps = 11/328 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-------RHTDIMWDLYDDIKVSETP 60
           + G +  A  ++ +M    LK ++  YN++L  L       +  +++ +++D+    + P
Sbjct: 307 KEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDN----DCP 362

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            +  T +I++D  CQ   +   I  L++       P V++   +++ +CK G  + A  L
Sbjct: 363 LDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVML 422

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M   G  P+  SY I++ GLC A    +A +  + M   G  P+ +T++ +      
Sbjct: 423 LKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCK 482

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A ++++++L+ G  PD+++Y+ +I G  + G  +E L+L  VM+++G   N I 
Sbjct: 483 KGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII 542

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS + S++ K GRI+  + +   ++ V ++ D V Y+ +I  LCK+    +AI+    M 
Sbjct: 543 YSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMV 602

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEAR 328
           S    PN   +  ++ GL  +  + EA+
Sbjct: 603 SSGCMPNESTYTILIRGLASEGFVKEAQ 630


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 228/432 (52%), Gaps = 1/432 (0%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEF-GPSVVSLNAIMSRYCKLGFAEVAK 118
           P NV T + ++ GL  ++++ DA++  ++   ++   P+ V    +M+   K G  E   
Sbjct: 129 PFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTL 188

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L  +M +    PD  +Y+I+I  LC   +++ A+   N+M +  + P+  TY+ L  G 
Sbjct: 189 SLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGL 248

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             L Q      ++ +++    +P++ T+++LI G C+ G VE+  ++   M+ +G + ++
Sbjct: 249 CKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDI 308

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           I YS ++   C  G++D A  +   +   G+KP++ +YSILI G CK+  + KA+QL+ E
Sbjct: 309 ITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGE 368

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           +  K + P++  +  IL GL E   I +A+  FD ++      D+ L++ ++ GY K G 
Sbjct: 369 ISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGL 428

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EA+ L+ +L   R   +I  +  +I G CKN +V +A  + + +   GL P   TY  
Sbjct: 429 VEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNV 488

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +  +C EG    +  +L++ME       ++TY V+++G  +  K+ E V  +++M   G
Sbjct: 489 MITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRG 548

Query: 479 VTPDQITYNTII 490
            + D  T   +I
Sbjct: 549 FSFDATTTGVLI 560



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 121/387 (31%), Positives = 200/387 (51%)

Query: 43  HTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLN 102
           HT+    L   ++   T  +V T SIVID LC+   L  AI  L E   K   P++ + N
Sbjct: 183 HTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYN 242

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
           +++   CKLG  E  K L   M+   ++P+  +++ILI GLC  G +E+A E    M   
Sbjct: 243 SLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEK 302

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           GVEPD ITYS +  G+ L  Q+  A +V   L  KG  P+I +Y++LI GYC+  N+ + 
Sbjct: 303 GVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKA 362

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           ++L   +  +G K + + YS +L  + + GRI +A  +  EM  VG  PD+  +S L+ G
Sbjct: 363 MQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFG 422

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
             K   V +A+ L++++   R   N   +  ++ GLC+ + + EA   F+ L     I D
Sbjct: 423 YFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPD 482

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           V  YN+MI G+ + G   E   + R++ +     + +T+N ++ GF ++ K+++    + 
Sbjct: 483 VRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMK 542

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            +   G    A T    +N   E  +I
Sbjct: 543 EMAGRGFSFDATTTGVLINVLKENPSI 569



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 237/504 (47%), Gaps = 36/504 (7%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  M++    P    ++ L   +         +    +M   G+       +I+  
Sbjct: 46  AVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTN 105

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF-K 235
            + L  +I  A+ V+   L  G   ++VT+  L+ G      V + + L + ++ +   +
Sbjct: 106 SYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICE 165

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            N + Y  +++ + K G  ++ L LL  ME    KPD+ TYSI+I  LCK   +  AI L
Sbjct: 166 PNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINL 225

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
            NEM  K I PN F + +++ GLC+     + +     ++  N   +V  ++I+IDG  K
Sbjct: 226 LNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCK 285

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G + +A ++ R +IEK + P I+T+++++ G+C  G+V  ARR+ + ++  G++P+  +
Sbjct: 286 EGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFS 345

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y+  +N YC++ N+ + + L  E+  K + P  VTY+ ++ GL +  ++ +A ++ ++M 
Sbjct: 346 YSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEML 405

Query: 476 VIGVTPD----------------------------------QIT-YNTIIRSFCKCKDLR 500
            +G TPD                                   I+ Y  +I   CK   +R
Sbjct: 406 RVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVR 465

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +A  +  ++    L P   TYN++I G C  G       +L  ++++      + Y  I+
Sbjct: 466 EAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIM 525

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGF 584
           +       + + ++F  +M  +GF
Sbjct: 526 QGFFRSNKISEIVSFMKEMAGRGF 549



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/524 (24%), Positives = 258/524 (49%), Gaps = 8/524 (1%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           DAV +  +M  +    S+  ++ L   + N++H   +  L+ ++++   P +    +IV 
Sbjct: 45  DAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVT 104

Query: 71  DGLCQQSRLQDA--ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +  C + R+  A  +L +    G  F  +VV+ N ++           A  LF  +++  
Sbjct: 105 NSYCLRHRIDCAFSVLPIYLKTGIPF--NVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 129 L-HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           +  P+   Y  +++GL   G  E+ L     M +   +PD  TYSI+         +  A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             ++ ++  K   P+I TY  LI G C++G  E+   L   M++     NV  +S+L+  
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK G++++A  ++  M   G++PD++TYS ++ G C + +V +A +++N +  K I PN
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
            F++  ++ G C+K+ + +A   F  +       D V Y+ ++ G +++G IG+A +++ 
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFD 402

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           +++    +P I   ++L++G+ K G V +A  L   ++ +  + +   YT  +N  C+  
Sbjct: 403 EMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKND 462

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            ++   A+ +++ +  + P   TY V+I G C++    E   +L  M   G   + ITYN
Sbjct: 463 RVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYN 522

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            I++ F +   + +    + +M        + T  +LI+ L  N
Sbjct: 523 VIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKEN 566



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/374 (22%), Positives = 152/374 (40%), Gaps = 51/374 (13%)

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           E   + +A   F  ++    +  V+ ++ +    + + +    V L+R++    I  S  
Sbjct: 39  EVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDS 98

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT------------------------ 415
             N +   +C   ++  A  +L      G+  + VT                        
Sbjct: 99  ILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKL 158

Query: 416 ------------YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
                       Y T MN   + G+ ++ L+LL+ ME     P   TY++VI  LCK   
Sbjct: 159 VREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDIN 218

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           L  A+ LL +M    + P+  TYN++I   CK     K   LL++M   N+ P   T++I
Sbjct: 219 LDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSI 278

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           LIDGLC  G +++AD ++  + E  +    + Y+ I+  +C  G V +A   F  + +KG
Sbjct: 279 LIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG 338

Query: 584 FEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
            + +I  Y+                  F  +   G  PD      +L    + G +G   
Sbjct: 339 IKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAK 398

Query: 629 ELAAVMIKSGLLPD 642
           ++   M++ G  PD
Sbjct: 399 KIFDEMLRVGPTPD 412


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 230/444 (51%), Gaps = 4/444 (0%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P +V + + +IDGL ++  +  A +   E   +   P  V+ N+I++   K    + A  
Sbjct: 8   PPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAME 67

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +  +M+     P+ F+YN ++HG C +G  E+A+     M   G+EPD +TY+ L     
Sbjct: 68  VLTVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLC 123

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              + + A K+   ++ +G  PDI TY  L+ GY   G + E   L  +M+  G +L+  
Sbjct: 124 KNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHH 183

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            +++L+ +  K  ++DE + +  +M   GL P+ V Y  +I GLCK  ++  A+  + +M
Sbjct: 184 VFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQM 243

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             K ++PN   + +++  LC  +   +A      ++      ++V +N ++D   K G +
Sbjct: 244 IDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRV 303

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            E+ +L+  L    ++P ++T+++LI G+C  GK+  A +LL  +   GL+P +VTY+T 
Sbjct: 304 IESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTL 363

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N YC+   ++  LAL +EME+  + P  +TY +++ GL +  +   A +L   +   G 
Sbjct: 364 INGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGT 423

Query: 480 TPDQITYNTIIRSFCKCKDLRKAF 503
             +  TYN I+  F K   L   F
Sbjct: 424 QLELSTYNIILMDFAKTNSLMMHF 447



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 226/430 (52%), Gaps = 4/430 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P VVS N I+    K G  + A   +  ML   + PDA +YN +I  L  A +M+ A+E 
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M    V P+  TY+ +  G+    Q   A  + +K+   G +PD+VTY  L+   C+
Sbjct: 69  LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G   E  K+ + M+ +G K ++  Y  LL      G + E   LL  M   G++ D   
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ILI    KQ+KV + + ++++M  + ++PN+  +  ++ GLC+   + +A + F+ +I
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 +VV+Y  +I          +A +L  +++++ I+P+IV FN+++   CK G+V 
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           ++++L D +   G+ P  +TY+T ++ YC  G +   + LL  M +  + P  VTY+ +I
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G CK  ++++A+ L ++M   GV PD ITYN I+    + +    A +L  ++     +
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQ 424

Query: 516 PTSATYNILI 525
              +TYNI++
Sbjct: 425 LELSTYNIIL 434



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 208/430 (48%), Gaps = 4/430 (0%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD  SYN +I GL   G +++A    ++M    V PDA+TY+ +         +  A +V
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           +  +++    P+  TY  ++ GYC  G  E+ + +   M S G + +V+ Y+ L+  +CK
Sbjct: 69  LTVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           +G+  EA  +   M   GLKPD+ TY  L+ G   +  + +   L   M    +  +   
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
              ++    ++E + E  + F  +       + V Y  +IDG  KLG + +A+  + Q+I
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           +K ++P++V + SLI+  C   K   A  L+  I   G+ P+ V + T +++ C+EG + 
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L   +    + P  +TY+ +I G C   K+  A++LL  M  +G+ PD +TY+T+I
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             +CK   +  A  L  +M  + + P   TYNI++ GL        A  L   + E    
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQ 424

Query: 551 LTKVAYTTII 560
           L    Y  I+
Sbjct: 425 LELSTYNIIL 434



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 194/391 (49%), Gaps = 4/391 (1%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           PD+V+Y  +I G  + G+V++       ML +    + + Y+ +++++ K+  +D A+ +
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L     V + P+  TY+ ++ G C   +  KAI ++ +MCS  I P+   + +++  LC+
Sbjct: 69  L----TVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
               TEAR  FDS++      D+  Y  ++ GY   G + E   L   +++  +      
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           FN LI  + K  KV +   +   ++  GL P+AV Y T ++  C+ G +   +   ++M 
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            K + P  V YT +I  LC   K ++A +L+ ++   G+ P+ + +NTI+ S CK   + 
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           ++ +L + +    + P   TY+ LIDG C+ G +  A  LL  +    +    V Y+T+I
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
             +C    +  A+  F +M   G    I  Y
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPDIITY 395



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 174/372 (46%), Gaps = 24/372 (6%)

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD+V+Y+ +I GL K+  V KA   Y+EM  +R+SP++  + +I+  L + + +  A   
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
              ++M NC      YN ++ GY   G   +A+ ++R++    I P +VT+NSL+   CK
Sbjct: 69  LTVMVMPNCFT----YNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           NGK  +AR++ D++   GL+P   TY T ++ Y  +G +  +  LL  M    +   H  
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           + ++I    KQ K+ E V +   M   G+TP+ + Y T+I   CK   L  A     QM 
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              L P    Y  LI  LC     + A+ L+  + +  I+   V + TI+ + C EG V 
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304

Query: 571 KAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
           ++                    K  F ++   G  PD      ++  +   G +    +L
Sbjct: 305 ES--------------------KKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKL 344

Query: 631 AAVMIKSGLLPD 642
              M+  GL PD
Sbjct: 345 LTGMVSVGLKPD 356



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 4/254 (1%)

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           C  DVV YN +IDG  K G++ +A   Y +++++R+SP  VT+NS+I    K   +  A 
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            +L  + +    P+  TY + M+ YC  G  ++ + + ++M +  I P  VTY  ++  L
Sbjct: 67  EVLTVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           CK  K  EA ++ + M   G+ PD  TY T++  +     L +   LL  M  + ++   
Sbjct: 123 CKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDH 182

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
             +NILI        +     +   +++  ++   V Y T+I   C  G +  AM  F Q
Sbjct: 183 HVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQ 242

Query: 579 MVEKGFEISIRDYT 592
           M++KG   ++  YT
Sbjct: 243 MIDKGLTPNVVVYT 256


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 163/631 (25%), Positives = 295/631 (46%), Gaps = 60/631 (9%)

Query: 26  DLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT---------NSIVIDGLCQQ 76
           + K ++ +Y SLL  + H  I         VS+ P+ + +         +++ +  +C++
Sbjct: 96  NFKHNVDSYASLLTLIDHHKI---------VSDVPKIIVSMIKCCYSAPDALFVSDICRK 146

Query: 77  SRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSY 136
               D               S+   N +++   + G  +    L+  ML+  +  D +++
Sbjct: 147 MSKDDITKL-----------SLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTF 195

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N++I+  C  G ++EA +F   M + G+ PD  T +    G+     +  A++V +++  
Sbjct: 196 NLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPN 255

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           +      V+Y  LI G C+ G ++E + L   M       NV  Y+ L+  +C+   + +
Sbjct: 256 RNE----VSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHK 310

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+GLL EM    L PDL+TY+ LI G C+   +  A +L + M  + + P+   +G  + 
Sbjct: 311 AMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFID 370

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
            LC+   + EAR  FDSL       +V++Y+++IDGY K+G + EA  L+ +++ K  SP
Sbjct: 371 FLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSP 430

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           +  TFN+LI+G C  G + +A  L D +   GL+P+  T+   +    ++G+       L
Sbjct: 431 NAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCL 490

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           Q+M +    P   TY   I+  C   K+QEA  ++  M   GV PD  TY ++I+++ K 
Sbjct: 491 QKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKL 550

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
                AF +L  M+  + EP+  T+  LI  L                      + + + 
Sbjct: 551 GLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLF-----------------DKRYVVEKSG 593

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
            T +++    GDV  +  +  +M+E  F+I I       F  M  +G  PD +  E ++ 
Sbjct: 594 ETGVESVSNFGDVPGSNMW--KMME--FDIVIE-----LFEEMEKHGCTPDSKCYEKLIS 644

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              +  +LG   +L   M K G+ P + + N
Sbjct: 645 GICKVENLGIALKLLDQMQKEGISPSEMVFN 675



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 165/650 (25%), Positives = 290/650 (44%), Gaps = 76/650 (11%)

Query: 14  DAVFV---IAKMKELDL-KVSIQTYNSLLYNLRH---TDIMWDLYDDIKVSETPRNVYTN 66
           DA+FV     KM + D+ K+S++ YN LL  L      D M  LY ++       ++YT 
Sbjct: 136 DALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTF 195

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +++I+  C+   +++A  F+ +       P   +  + +  YC+    + A  +F  M  
Sbjct: 196 NLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMP- 254

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
              + +  SYN LIHGLC AG ++EA+     M      P+  TY+ L KG      +  
Sbjct: 255 ---NRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGL-CRKNVHK 310

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  ++ ++L +   PD++TY  LI G C+ G+++   +L  +M  +G   +   Y   + 
Sbjct: 311 AMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFID 370

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CKS R++EA  L   +   G+  +++ YS+LI G CK  KV +A  L+ +M SK  SP
Sbjct: 371 FLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSP 430

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N++   A++ GLC    + EA   FD ++       V  +NI+I   +K G+  +A +  
Sbjct: 431 NAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCL 490

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS-------------- 412
           ++++     P   T+N+ I  +C  GKV +A  ++  +K  G+ P               
Sbjct: 491 QKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKL 550

Query: 413 AVTYTTF------MNAYCEEGN------IQRL---------------------------- 432
            +TY+ F       +A CE  +      I++L                            
Sbjct: 551 GLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSN 610

Query: 433 ----------LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
                     + L +EME     P    Y  +I G+CK   L  A++LL+ M   G++P 
Sbjct: 611 MWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPS 670

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           ++ +N +I   CK +   +A  ++  M      P       LI GL   G+ +  + +  
Sbjct: 671 EMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFK 730

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            L+    +  ++A+  +I     +G V +    F +M + G   S R Y+
Sbjct: 731 KLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYS 780



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 137/555 (24%), Positives = 245/555 (44%), Gaps = 37/555 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y R+  V  A  V  +M   + +VS   YN L++ L      D    L+  +K      N
Sbjct: 237 YCRSKDVDSAFRVFEEMPNRN-EVS---YNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPN 292

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           VYT + +I GLC+++ +  A+  L E   +   P +++ N++++  C+ G  + A  L  
Sbjct: 293 VYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLS 351

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           LM + GL PD  +Y   I  LC +  +EEA    + +   GV  + I YS+L  G+  + 
Sbjct: 352 LMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVG 411

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A  + +K+L K   P+  T+  LI G C  GN++E L L + M+  G K  V  ++
Sbjct: 412 KVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFN 471

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +L+  M K G  D+A   L +M + G KP   TY+  I   C   KV +A  +  +M  +
Sbjct: 472 ILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEE 531

Query: 303 RISPNSFAHGAIL-----LGLCEKEMITEARMY----------FDSLIMSNCIQDVVLYN 347
            + P+ F + +++     LGL          M+          F SLI     +  V+  
Sbjct: 532 GVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEK 591

Query: 348 IMIDGYVKLGNIGEA--------------VQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
               G   + N G+               ++L+ ++ +   +P    +  LI G CK   
Sbjct: 592 SGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVEN 651

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           +  A +LLD ++  G+ PS + +   ++  C+         ++++M      P       
Sbjct: 652 LGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKT 711

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I GL ++ + +    + + +   G   D+I +  +I    K   + +  QL  +M  + 
Sbjct: 712 LICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNG 771

Query: 514 LEPTSATYNILIDGL 528
              +  TY+IL   L
Sbjct: 772 CNFSPRTYSILTQKL 786



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 125/292 (42%), Gaps = 21/292 (7%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
           VY   G V +A  ++ +MKE  +     TY SL+       + +  +D +K         
Sbjct: 511 VYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKS-------- 562

Query: 65  TNSIVIDGLCQQSRLQDAILFLQ--------ETAGKEFGPSVVSLNAIM-SRYCKLGFAE 115
               + D  C+ S      L  Q        E +G+    SV +   +  S   K+   +
Sbjct: 563 ----MFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFD 618

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
           +   LF  M K+G  PD+  Y  LI G+C   ++  AL+  + M + G+ P  + ++ + 
Sbjct: 619 IVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVI 678

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                L +   A  +++ ++  G  P +     LICG  + G  E G  + + +   G+ 
Sbjct: 679 SCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYN 738

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            + IA+ +L+  M K G ++E   L  EME  G      TYSIL + L  +D
Sbjct: 739 DDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLHGKD 790


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 156/652 (23%), Positives = 288/652 (44%), Gaps = 52/652 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
           ++  + +   +I  M++   + +   Y +L   L +++ +DIM  L+  ++      +V+
Sbjct: 175 KSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVH 234

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             + VI    ++ RL  A+  L E         +V  N  +  + K G  ++A   F  +
Sbjct: 235 LFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEI 294

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             +GL PD  +Y  +I  LC    ++EA+E    M ++   P A  Y+ +  G+    + 
Sbjct: 295 KSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKF 354

Query: 185 SGAWKVIQKLLIKG----------------------------------SDPDIVTYTVLI 210
             A+ ++++   +G                                  + P++ TY VLI
Sbjct: 355 DEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLI 414

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
              C+ G VE   K+R+ M   G   NV+  ++++  +CK+ ++DEA  +   M      
Sbjct: 415 DMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICS 474

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD VT+  LI GL KQ +V  A +LY +M      PN+  + +++    +     +    
Sbjct: 475 PDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKI 534

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           F  +I   C  D+ L N  +D   K G  G+   L+ ++  +   P +++++ LI+G  K
Sbjct: 535 FKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVK 594

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G   +   L   +K  G       Y TF++ +C+ G + +   LL+EM+TK   PT VT
Sbjct: 595 AGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVT 654

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  VI GL K  +L EA  L E+    G+  + + Y+++I  F K   + +A+ ++ ++ 
Sbjct: 655 YGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELM 714

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              L P   T+N L+D L    ++  A     +++    +   + Y+ +I   C     +
Sbjct: 715 QKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFN 774

Query: 571 KAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPD 607
           KA  F+ +M ++G + +   YT                S F    +NG  PD
Sbjct: 775 KAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPD 826



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 261/546 (47%), Gaps = 8/546 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y   G   +A  ++ + K      S+  YN +L  L     + +    ++++K    P N
Sbjct: 348 YGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAP-N 406

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGL 120
           + T +++ID LC+   ++ A  F    A KE G  P+V+++N ++ R CK    + A  +
Sbjct: 407 LSTYNVLIDMLCKAGEVEAA--FKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSI 464

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M      PD  ++  LI GL   G +++A      M      P+A+ Y+ L K F  
Sbjct: 465 FEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFK 524

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +     K+ ++++ +G  PD+      +    + G   +G  L E + S+GF  +V++
Sbjct: 525 CGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMS 584

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS+L+  + K+G   E   L Y M+  G   D   Y+  I G CK  KV+KA QL  EM 
Sbjct: 585 YSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMK 644

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +K   P    +G+++ GL + + + EA M F+    +    +VV+Y+ +IDG+ K+G I 
Sbjct: 645 TKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRID 704

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  +  +L++K ++P++ T+N L+    K  ++ +A      +K     P+ +TY+  +
Sbjct: 705 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILI 764

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N  C      +     QEM+ + + P  +TYT +I GL K   + EA  L E     G  
Sbjct: 765 NGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGV 824

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD  +YN II      +   +A+++  +  +      + T   L+D L  +  L+ A  +
Sbjct: 825 PDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIV 884

Query: 541 LVSLQE 546
              L+E
Sbjct: 885 GAVLRE 890



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 160/641 (24%), Positives = 284/641 (44%), Gaps = 43/641 (6%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPR 61
           V++R G +  A+ ++ +MK   L   I  YN            D+ W  + +IK      
Sbjct: 242 VFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLP 301

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEV---- 116
           +  T + +I  LC+ +RL +A+   ++       P   + N ++  Y   G F E     
Sbjct: 302 DDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLL 361

Query: 117 ----AKG-----------LFCL--------------MLKYGLHPDAFSYNILIHGLCIAG 147
               A+G           L CL               +K    P+  +YN+LI  LC AG
Sbjct: 362 ERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAG 421

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            +E A +  + M   G+ P+ +T +I+        ++  A  + + +  K   PD VT+ 
Sbjct: 422 EVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFC 481

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            LI G  + G V++  +L E ML      N + Y+ L+ S  K GR ++   +  EM   
Sbjct: 482 SLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHR 541

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  PDL   +  +  + K  +  K   L+ E+ S+   P+  ++  ++ GL +     E 
Sbjct: 542 GCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARET 601

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F ++    C+ D   YN  IDG+ K G + +A QL  ++  K   P++VT+ S+I G
Sbjct: 602 YELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDG 661

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
             K  ++ +A  L +  K +GLE + V Y++ ++ + + G I     +++E+  K + P 
Sbjct: 662 LAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 721

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             T+  ++  L K  ++ EA+   ++M  +  TP+ ITY+ +I   C+ +   KAF    
Sbjct: 722 VYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQ 781

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M    L+P + TY  +I GL   G++  A  L    + +       +Y  II+      
Sbjct: 782 EMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSR 841

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ 608
              +A   F +   KG  I    +TK+  C+ L +    D+
Sbjct: 842 RAMEAYKIFEETRMKGCNI----HTKT--CIALLDALQKDE 876



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 148/644 (22%), Positives = 273/644 (42%), Gaps = 62/644 (9%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGK---EFGPSVV-SLNAIMSRYCKLGF 113
           E+P+      +VI  L +   +  AI + + T  K      P    SL  +M++  K  +
Sbjct: 91  ESPKT----DLVIGVLRRAKDVNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKFDY 146

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            E   G   +    G  P   +   LI     +  + E  +    M +    P    Y+ 
Sbjct: 147 FEQILGEMSIA---GFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTT 203

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L      + +      +  ++   G +  +  +T +I  + + G ++  L L + M S  
Sbjct: 204 LIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNC 263

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              +++ Y+V +    K+G++D A    +E+++ GL PD VTY+ +I  LCK +++ +A+
Sbjct: 264 LHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAV 323

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           +++ +M   R  P ++A+  +++G        EA    +      CI  V+ YN ++   
Sbjct: 324 EIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCL 383

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K G +GEA++ + ++ +K  +P++ T+N LI   CK G+V  A ++ D +K  GL P+ 
Sbjct: 384 GKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNV 442

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           +T    ++  C+   +    ++ + M  K   P  VT+  +I GL KQ ++ +A +L E 
Sbjct: 443 MTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQ 502

Query: 474 MYVIGVTPDQITYNTIIRSFCKC-------------------KDLR-------------- 500
           M      P+ + Y ++I+SF KC                    DLR              
Sbjct: 503 MLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGE 562

Query: 501 --KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
             K   L  ++      P   +Y+ILI GL   G  +    L  +++E    L   AY T
Sbjct: 563 TGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNT 622

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS---------------FFCMMLSNG 603
            I   C  G V+KA     +M  KG + ++  Y                   F    SNG
Sbjct: 623 FIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 682

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
              +  I   ++  F + G +   + +   +++ GL P+ +  N
Sbjct: 683 LELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 726


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 244/493 (49%), Gaps = 8/493 (1%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSR---LQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           ++ SE+   V  N +VI GL +Q R   L  A+L      G  F    V++N  +   C+
Sbjct: 120 LRASESADTVSYN-VVISGLTEQGRHGGLAPALLAEMCKRGVPF--DAVTVNTALVALCR 176

Query: 111 LGFAEVAKGLFCLMLK-YGLHP-DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
            G  E A  L  +M++   +H  D   +N L+ G C +G ME AL     M   GV  D 
Sbjct: 177 DGQVEGAAALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDV 236

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           + Y+ L  G     +   A  +++ +   G +P++VTYT  I   C+   V++   L E 
Sbjct: 237 VGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEE 296

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M+  G   +V+  S L+  +C++GR  EA  L  EME +G  P+ VTY  LI  L K  +
Sbjct: 297 MVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARR 356

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
             ++  L  E+ S+ +  +   + +++  L ++  I E +  F   +  N   + V Y +
Sbjct: 357 GSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTV 416

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +ID   + GN+  A Q+  ++ +K + P++VTF+S+I G  K G +  A   +  +K  G
Sbjct: 417 LIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERG 476

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           ++P+ VTY T M+ + +    +  L L  EM  + +        +++ GL K  K++EA 
Sbjct: 477 IDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAE 536

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            L  DM   G+  D + Y T+I    K  ++  AF++  ++   NL P +  YN+ ++ L
Sbjct: 537 ALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCL 596

Query: 529 CVNGDLKNADCLL 541
           C+ G  K A+ +L
Sbjct: 597 CMLGKSKEAESIL 609



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 241/488 (49%), Gaps = 9/488 (1%)

Query: 99  VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE-ALEFTN 157
           +SLN+I+  +C L     A  L    L+     D  SYN++I GL   G     A     
Sbjct: 98  LSLNSILLSHCALRSLRPALAL----LRASESADTVSYNVVISGLTEQGRHGGLAPALLA 153

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP---DIVTYTVLICGYC 214
           +M + GV  DA+T +          Q+ GA   + +++++G +    D+V +  L+ GYC
Sbjct: 154 EMCKRGVPFDAVTVNTALVALCRDGQVEGA-AALAEMMVRGREIHRLDVVGWNALLDGYC 212

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           + G++E  L   + M +QG  ++V+ Y+ L++ +C++G  D A G+L  M+  G++P++V
Sbjct: 213 KSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVV 272

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+  I   C+ + V  A  LY EM    + P+     A++ GLC     +EA   F  +
Sbjct: 273 TYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREM 332

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                  + V Y  +ID   K     E+  L  +++ + +   +V + SL+    K GK+
Sbjct: 333 EKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKI 392

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            + + +          P+ VTYT  ++A C  GN+     +L EME K++ P  VT++ +
Sbjct: 393 DEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSI 452

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I GL KQ  L +A   +  M   G+ P+ +TY T++  F KC++   A  L ++M    +
Sbjct: 453 INGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGV 512

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
           E      ++L++GL  NG ++ A+ L   + +  + L  V YTT+I      G++  A  
Sbjct: 513 EVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFK 572

Query: 575 FFCQMVEK 582
              ++ E+
Sbjct: 573 VGQELTER 580



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 38/350 (10%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVY 64
           R G    A  ++  MK   ++ ++ TY + +     T   D  + LY+++       +V 
Sbjct: 248 RAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVV 307

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVS--------------------LNAI 104
           T S ++DGLC+  R  +A    +E       P+ V+                    L  +
Sbjct: 308 TLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEV 367

Query: 105 MSR---------------YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
           +SR                 K G  +  K +F   L     P+  +Y +LI  LC AG++
Sbjct: 368 VSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNV 427

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           + A +   +M    V P+ +T+S +  G      +  A   ++K+  +G DP++VTY  +
Sbjct: 428 DGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTV 487

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + G+ +    E  L L   ML +G ++N     +L++ + K+G+++EA  L  +M   G+
Sbjct: 488 MDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGM 547

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
             D V Y+ LI GL K   +  A ++  E+  + +SP++  +   +  LC
Sbjct: 548 LLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLC 597



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 30/149 (20%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNV 63
           ++ G++  A   + KMKE  +  ++ TY +++   +  +  +   DLY ++       N 
Sbjct: 457 TKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNK 516

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           +   ++++GL +  ++++A    ++   +      V+   ++    K+G    A  +   
Sbjct: 517 FIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQE 576

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           + +  L PDA  YN+ ++ LC+ G  +EA
Sbjct: 577 LTERNLSPDAVVYNVFVNCLCMLGKSKEA 605



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 6/109 (5%)

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN-A 537
           V  D ++ N+I+ S C  + LR A  LL      +    + +YN++I GL   G     A
Sbjct: 93  VPGDPLSLNSILLSHCALRSLRPALALLRA----SESADTVSYNVVISGLTEQGRHGGLA 148

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
             LL  + +  +    V   T + A C +G V  A     +M+ +G EI
Sbjct: 149 PALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAA-LAEMMVRGREI 196


>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
 gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
          Length = 735

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 141/539 (26%), Positives = 248/539 (46%), Gaps = 13/539 (2%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A+ +  LM++ G+      +  L+     AG +  A+     M + G  PD    ++   
Sbjct: 145 ARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVN 204

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
              +  +I  A +  +++   G DPD+VTY  LI G C    + + L++   ML  G   
Sbjct: 205 VLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLP 264

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + I+Y  ++S +CK  R+ +   LL  M   G+ PD VTY++LI GL K     +A+   
Sbjct: 265 DKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFL 324

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            E   KR   +   + A +   C    + EA+     +I   C  DVV Y+ ++DG+ ++
Sbjct: 325 RESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRI 384

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G + +A ++ + + +    P+ VT  +L+ G CK GK ++A  LL+  +     PSA+TY
Sbjct: 385 GELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITY 444

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           +  M+ +  EG ++    ++ +M  K   PT V   ++I  LC + K  +A   +E    
Sbjct: 445 SVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQS 504

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G   + + + T+I  F +  DL  A  LL+ M+L N  P   TY +++D L   G +K 
Sbjct: 505 KGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKE 564

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK-GFEISIRDY---- 591
           A  L+  +    +  T V Y T+I  +C +G V   +    +M+ K GF  +        
Sbjct: 565 ATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGFSSAYNQVIEKL 624

Query: 592 --------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                     +    +L      D + C +++ +F   G     + +A  M +  L+PD
Sbjct: 625 CAFGKLSEANNLLSKVLRTASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQRNLIPD 683



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/562 (26%), Positives = 267/562 (47%), Gaps = 7/562 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKE----LDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVS 57
           L   YSR G +  A+ V+  M++     D+ +     N L+   R  D   +  + ++  
Sbjct: 167 LMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGR-IDKALEFAERMRRV 225

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +V T + +I GLC   R+ DA+  +         P  +S   +MS  CK       
Sbjct: 226 GVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADV 285

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L   M   G+ PD  +YN+LIHGL   G  +EAL F  +        D + YS     
Sbjct: 286 QNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHS 345

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F L  +++ A ++I +++ KG  PD+VTY+ ++ G+C+IG +++  K+ + M   G K N
Sbjct: 346 FCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPN 405

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + ++ LL+ +CK G+  EA  LL + E     P  +TYS+++ G  ++ K+ ++  +  
Sbjct: 406 TVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVM 465

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M  K   P +     ++  LC +    +A+ + +      C  +VV +  +I G+ + G
Sbjct: 466 QMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQG 525

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           ++  A+ L   +      P +VT+  ++    + GK+ +A  L++ +   GL P+ VTY 
Sbjct: 526 DLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYR 585

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T ++ YCE+G ++ LL LL +M  K    +   Y  VI+ LC   KL EA  LL  +   
Sbjct: 586 TVIHRYCEKGAVEDLLNLLDKMLAKEGFSS--AYNQVIEKLCAFGKLSEANNLLSKVLRT 643

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
               D  T + ++ SF       +++ +  +M+  NL P       +   L + G+ + A
Sbjct: 644 ASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQRNLIPDLKLCQKVDSQLALAGEKQAA 703

Query: 538 DCLLVSLQEHNISLTKVAYTTI 559
             L++   E  +++      T+
Sbjct: 704 GKLIIKFVERGVNMHNGEEVTV 725


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 204/415 (49%), Gaps = 1/415 (0%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
            P  ++ + +++ +CK    + A  L   M K G+ P    YN +I GLC  G ++ AL 
Sbjct: 30  SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 89

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
              DM RH   P  ITY+IL       ++IS A  +++ ++  G  P++VTY  LI G+C
Sbjct: 90  HYRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 148

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           ++GN++E + L   ML      +V  Y++L+   CK  R  +   LL EM   G +P+ +
Sbjct: 149 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 208

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+ L+  L K  K   A  L   M  +   P+ F    ++   C+   +  A   F  +
Sbjct: 209 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 268

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
               C+ D+  YNIMI G  +   I +A QL  ++ E    P +VT+NS++ G CK  +V
Sbjct: 269 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQV 328

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +A  + + ++  G     VT +T ++  C+   +     LL+EME     P  V YT++
Sbjct: 329 DEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTIL 388

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           I G CK  +L +++    +M   G  P  ITY+ +I   CK   +R    LL  M
Sbjct: 389 IHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 443



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 223/448 (49%), Gaps = 1/448 (0%)

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           N ++S + +   A+ A  LF   L     PD+ +Y+ LI+G C A   ++A    ++M +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            G+ P    Y+ + KG     ++  A  V  + + +   P ++TYT+L+   C+   + +
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRHCAPSVITYTILVDALCKSARISD 120

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
              + E M+  G   NV+ Y+ L++  CK G +DEA+ L  +M      PD+ TY+ILI 
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           G CKQ++     +L  EM      PN   +  ++  L +     +A      ++  +C  
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
               +N+MID + K+G +  A +L++ + ++   P I T+N +I G C+  ++ DAR+LL
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           + +   G  P  VTY + ++  C+   +     + + +         VT + +I GLCK 
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 360

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            +L +A +LL +M   G  PD + Y  +I  FCK   L K+    ++M      PT  TY
Sbjct: 361 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 420

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNI 549
           +I+ID LC +  +++   LL ++ E  +
Sbjct: 421 SIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 210/432 (48%), Gaps = 1/432 (0%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           +DL+ +        +  T S +I+G C+    Q A   L E   +   P     N I+  
Sbjct: 18  YDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKG 77

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
            C  G  + A   +  M ++   P   +Y IL+  LC +  + +A     DM   G  P+
Sbjct: 78  LCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPN 136

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            +TY+ L  GF  L  +  A  +  ++L     PD+ TY +LI GYC+    ++G KL +
Sbjct: 137 VVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQ 196

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M+  G + N I Y+ L+ S+ KSG+  +A  L   M     KP   T++++I   CK  
Sbjct: 197 EMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVG 256

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           ++  A +L+  M  +   P+ + +  ++ G C    I +AR   + +  + C  DVV YN
Sbjct: 257 QLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYN 316

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            ++ G  K   + EA ++Y  L        +VT ++LI G CK+ ++ DA +LL  ++ +
Sbjct: 317 SIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERN 376

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G  P  V YT  ++ +C+   + + LA   EM  K   PT +TY++VI  LCK  ++++ 
Sbjct: 377 GSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDG 436

Query: 468 VQLLEDMYVIGV 479
             LL+ M   GV
Sbjct: 437 CMLLKTMLERGV 448



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 212/406 (52%), Gaps = 1/406 (0%)

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A+ + +  L     PD +TY+ LI G+C+  + ++  +L + M  +G   +   Y+ ++ 
Sbjct: 17  AYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIK 76

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C +GR+D AL    +M+     P ++TY+IL+  LCK  ++  A  +  +M     +P
Sbjct: 77  GLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAP 135

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N   +  ++ G C+   + EA + F+ ++ ++C  DV  YNI+IDGY K     +  +L 
Sbjct: 136 NVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLL 195

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           +++++    P+ +T+N+L+    K+GK  DA  L   +     +PS  T+   ++ +C+ 
Sbjct: 196 QEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKV 255

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +     L Q M  +   P   TY ++I G C+  ++ +A QLLE M   G  PD +TY
Sbjct: 256 GQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTY 315

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           N+I+   CK   + +A+++   +          T + LIDGLC +  L +A+ LL  ++ 
Sbjct: 316 NSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 375

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +  +   VAYT +I   C    + K++ FF +M++KG   ++  Y+
Sbjct: 376 NGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYS 421



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 196/418 (46%), Gaps = 1/418 (0%)

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           PD+ITYS L  GF        A++++ ++  +G  P    Y  +I G C  G V+  L  
Sbjct: 31  PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
              M  +    +VI Y++L+ ++CKS RI +A  +L +M   G  P++VTY+ LI G CK
Sbjct: 91  YRDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
              + +A+ L+N+M     SP+ F +  ++ G C++E   +       ++   C  + + 
Sbjct: 150 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 209

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN ++D  VK G   +A  L + ++ +   PS  TFN +I  FCK G++  A  L   + 
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT 269

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             G  P   TY   ++  C    I     LL+ M      P  VTY  ++ GLCK  ++ 
Sbjct: 270 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 329

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA ++ E +   G   D +T +T+I   CK + L  A +LL +M  +   P    Y ILI
Sbjct: 330 EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILI 389

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            G C    L  +      + +     T + Y+ +I   C    V         M+E+G
Sbjct: 390 HGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 174/331 (52%), Gaps = 3/331 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           ++  + DA  ++  M E     ++ TYN+L+     L + D    L++ +  +    +V+
Sbjct: 114 KSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVF 173

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I+IDG C+Q R QD    LQE       P+ ++ N +M    K G    A  L  +M
Sbjct: 174 TYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMM 233

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L+    P  F++N++I   C  G ++ A E    M   G  PD  TY+I+  G    ++I
Sbjct: 234 LRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRI 293

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++++++   G  PD+VTY  ++ G C+   V+E  ++ EV+ + G+ L+V+  S L
Sbjct: 294 DDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTL 353

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +CKS R+D+A  LL EME  G  PD+V Y+ILI G CK D++ K++  ++EM  K  
Sbjct: 354 IDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGC 413

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
            P    +  ++  LC+   + +  M   +++
Sbjct: 414 VPTVITYSIVIDKLCKSARVRDGCMLLKTML 444



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 119/282 (42%), Gaps = 18/282 (6%)

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGL-EPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           N L+  F +  K  +A  L     L GL  P ++TY+T +N +C+  + Q+   LL EME
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKN-HLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 60

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            + I P +  Y  +IKGLC   ++  A+    DM      P  ITY  ++ + CK   + 
Sbjct: 61  KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARIS 119

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
            A  +L  M      P   TYN LI+G C  G++  A  L   + E++ S     Y  +I
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFP 605
             +C +           +MV+ G E +   Y                 +   MML     
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           P      +M+  F + G L   +EL  +M   G LPD +  N
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYN 281



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 3/160 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R   + DA  ++ +M E      + TYNS++  L      D  +++Y+ ++      +V 
Sbjct: 289 RANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVV 348

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S +IDGLC+  RL DA   L+E       P VV+   ++  +CK    + +   F  M
Sbjct: 349 TCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM 408

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           L  G  P   +Y+I+I  LC +  + +       M   GV
Sbjct: 409 LDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448


>gi|296081018|emb|CBI18522.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 162/602 (26%), Positives = 271/602 (45%), Gaps = 74/602 (12%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKE-FGPSVVSLNAIMSRYCKLGFAEVAK 118
           P   + +S VI G C+ S+ Q A+ F +         P++ +  A++    +LG      
Sbjct: 84  PFGNFVSSSVISGFCKISKPQLAVGFFENAVNSRVLRPNIATCTALLGALFQLGRVREVS 143

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M +     D   Y+  I G    G + EA+    +M   G+ PD ++Y+IL  GF
Sbjct: 144 DLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGF 203

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +  A   ++K+   G  P++VTYT ++ G+C+ G ++E   L +++ + G +++ 
Sbjct: 204 SREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDE 263

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y  L+   C  G ID   GLL +ME  G+ P +VTY+ +I GLCK  +  +A ++   
Sbjct: 264 FMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADEV--- 320

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMI-----TEARMYFDS----LIMSNCI--------- 340
             SK I+ ++     +L G  E+E +     T+ R+  D     L+M N I         
Sbjct: 321 --SKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGA 378

Query: 341 -----------------QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF-- 381
                             D V Y  MI+GY ++  I EA++++ +  +  IS   + F  
Sbjct: 379 LEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKTSISSCYLFFVQ 438

Query: 382 ------------------------NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
                                    S++    KNG++ DA +L+   + +      V Y+
Sbjct: 439 EGFFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLVDYS 498

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++  C+EG++ + L L   ++ K I      Y  VI GLC+Q  L +A +L + +  I
Sbjct: 499 IMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKI 558

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
            + P +ITY T+I S CK   L  A QL  +M +    P    YN LIDG C  G+++ A
Sbjct: 559 DLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEA 618

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             LL+ L+   I   +   + +I  +C +GD+  A+ FF       FE   +D    F  
Sbjct: 619 LNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFF-------FEFKKKDILPDFLG 671

Query: 598 MM 599
            M
Sbjct: 672 FM 673



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/562 (25%), Positives = 262/562 (46%), Gaps = 47/562 (8%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+IDG  ++  ++ AI FL++       P++V+  AIM  +CK G  + A  LF ++  
Sbjct: 197 TILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVEN 256

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G+  D F Y  LI G C  G ++       DM + G+ P  +TY+ +  G     + S 
Sbjct: 257 LGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSE 316

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +V      KG   D VT++ L+ GY +  NV+  L+ +  +   G  ++++  + ++ 
Sbjct: 317 ADEVS-----KGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIK 371

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           ++   G +++A      M  + L  D VTY  +I G C+  ++ +A+++++E     IS 
Sbjct: 372 ALLMVGALEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKTSISS 431

Query: 307 NS--FAHGAILLGLC------EKEMITEARMYFDSLIMSNC------------------- 339
               F       G        EKE IT A   F   ++ +                    
Sbjct: 432 CYLFFVQEGFFPGCMRSIHENEKETITVA---FPVSVLKSLKKNGRILDAYKLVIGAEEN 488

Query: 340 --IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
             + D+V Y+IMID   K G++ +A+ L   + +K I+ +I  +NS+I G C+ G +  A
Sbjct: 489 LPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQA 548

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
            RL D+++   L PS +TY T +++ C+EG +     L ++M  K   P    Y  +I G
Sbjct: 549 FRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDG 608

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
            CK   ++EA+ LL D+    + PD+ T + +I  +C   D+  A     +    ++ P 
Sbjct: 609 YCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILPD 668

Query: 518 SATYNILIDGLCVNGDLKNADCLLVS-LQEHNI---------SLTKVAYTTIIKAHCAEG 567
              +  L+ GLC  G ++ A  +L   LQ  ++          +   +  + I + C +G
Sbjct: 669 FLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISLCEQG 728

Query: 568 DVHKAMTFFCQMVEKGFEISIR 589
            + +A+T   ++    F I  R
Sbjct: 729 SIQEAVTVLNEVGSIFFPIGRR 750



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 267/545 (48%), Gaps = 48/545 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSET---PRN 62
           +SR G V  A+  + KMK+  LK ++ TY +++        + + Y   K+ E      +
Sbjct: 203 FSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVD 262

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +    +IDG C +  +      L++   +   PS+V+ N+I++  CK G    A     
Sbjct: 263 EFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEAD---- 318

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             +  G+  DA +++ L+HG     +++  LE    +   GV  D +  + + K   ++ 
Sbjct: 319 -EVSKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVG 377

Query: 183 QISGAWKVIQKLLIKGSD--PDIVTYTVLICGYCQIGNVEEGLKL----REVMLS----- 231
            +  A+   + +   G D   D VTY  +I GYC++  +EE L++    R+  +S     
Sbjct: 378 ALEDAYAFYKGM--SGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKTSISSCYLF 435

Query: 232 ---QGF-------------KLNVIAYSV-LLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
              +GF             +   +A+ V +L S+ K+GRI +A  L+   E      DLV
Sbjct: 436 FVQEGFFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLV 495

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
            YSI+I  LCK+  + KA+ L   +  K I+ N +A+ +++ GLC +  + +A   FDSL
Sbjct: 496 DYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSL 555

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
              + +   + Y  +ID   K G + +A QL+ +++ K  +P++  +NSLI G+CK G +
Sbjct: 556 EKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNM 615

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +A  LL  +K   ++P   T +  +N YC +G+++  L    E + K I P  + +  +
Sbjct: 616 EEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILPDFLGFMYL 675

Query: 455 IKGLCKQWKLQEAVQLLEDMY-------VIGVTPDQITYNTI---IRSFCKCKDLRKAFQ 504
           ++GLC + +++EA  +L +M        +I     +I   ++   I S C+   +++A  
Sbjct: 676 VRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISLCEQGSIQEAVT 735

Query: 505 LLNQM 509
           +LN++
Sbjct: 736 VLNEV 740



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 226/501 (45%), Gaps = 48/501 (9%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+ P +F+++ LIH     G M  A+E    M       D + Y      F   S ISG 
Sbjct: 45  GILPSSFTFHSLIHSFTSQGKMSRAIEVLELMTH-----DKVRYPF--GNFVSSSVISGF 97

Query: 188 WKVIQKLLIKGS----------DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
            K+ +  L  G            P+I T T L+    Q+G V E   L   M  + F  +
Sbjct: 98  CKISKPQLAVGFFENAVNSRVLRPNIATCTALLGALFQLGRVREVSDLVSWMEREEFVFD 157

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V+ YS  +    + G + EA+    EM   G+ PD V+Y+ILI G  ++  V KAI    
Sbjct: 158 VVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLE 217

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M    + PN   + AI+LG C+K  + EA   F  +       D  +Y  +IDG+   G
Sbjct: 218 KMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRG 277

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           +I     L   + ++ ISPSIVT+NS+I G CK G+ ++A    D +   G+   AVT++
Sbjct: 278 DIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEA----DEVS-KGIAGDAVTFS 332

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T ++ Y EE N++ +L   + +E   +    V    +IK L     L++A    + M  +
Sbjct: 333 TLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGALEDAYAFYKGMSGM 392

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW-----------------------LHNL 514
            +  D +TY T+I  +C+   + +A ++ ++                         +H  
Sbjct: 393 DLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKTSISSCYLFFVQEGFFPGCMRSIHEN 452

Query: 515 EPTSATYNI---LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
           E  + T      ++  L  NG + +A  L++  +E+   +  V Y+ +I   C EG + K
Sbjct: 453 EKETITVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLVDYSIMIDVLCKEGHLDK 512

Query: 572 AMTFFCQMVEKGFEISIRDYT 592
           A+     + +KG  ++I  Y 
Sbjct: 513 ALDLCAFVKKKGIALNIYAYN 533



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 192/416 (46%), Gaps = 16/416 (3%)

Query: 206 YTVLICGYC-QIGNVEEGLK-LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           +  LI G C ++ + E+ L  L++ + + G   +   +  L+ S    G++  A+ +L  
Sbjct: 16  WDSLIRGLCVKLKDPEKALLILQDCLTNLGILPSSFTFHSLIHSFTSQGKMSRAIEVLEL 75

Query: 264 MEAVGLKPDLVTY--SILIRGLCKQDKVHKAIQLY-NEMCSKRISPNSFAHGAILLGLCE 320
           M    ++     +  S +I G CK  K   A+  + N + S+ + PN     A+L  L +
Sbjct: 76  MTHDKVRYPFGNFVSSSVISGFCKISKPQLAVGFFENAVNSRVLRPNIATCTALLGALFQ 135

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              + E       +     + DVV Y+  I GY + G + EA++ ++++IEK I+P  V+
Sbjct: 136 LGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVS 195

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +  LI GF + G V  A   L+ +K  GL+P+ VTYT  M  +C++G +     L + +E
Sbjct: 196 YTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVE 255

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
              I      Y  +I G C +  +     LLEDM   G++P  +TYN+II   CK     
Sbjct: 256 NLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTS 315

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +A ++        +   + T++ L+ G     ++K        L+E  + +  V   TII
Sbjct: 316 EADEV-----SKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTII 370

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
           KA    G +  A  F+  M   G ++     T   +C M+ NG+     I E + I
Sbjct: 371 KALLMVGALEDAYAFYKGM--SGMDLVADSVT---YCTMI-NGYCRVSRIEEALEI 420



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 26/238 (10%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVY 64
           + G + DA  +  KM       +++ YNSL+       + +   +L  D+K      + +
Sbjct: 576 KEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEF 635

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S +I+G C +  ++ A+ F  E   K+  P  +    ++   C  G  E A+G+   M
Sbjct: 636 TVSALINGYCHKGDMEGALGFFFEFKKKDILPDFLGFMYLVRGLCAKGRMEEARGILREM 695

Query: 125 L----------KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           L          +     +  S    I  LC  GS++EA+   N++G       +I + I 
Sbjct: 696 LQTRSVLELINRVDTEIETESVESFIISLCEQGSIQEAVTVLNEVG-------SIFFPI- 747

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSD-PDIVTYTVLICGYCQIGN-VEEGLKLREVML 230
            +     ++     K+ +    KGS  PD  +Y  LI   C  G  +E   K R+++L
Sbjct: 748 GRRCRPQNRAEKEEKIYEG---KGSRVPDFESYYSLIASLCSRGELLEANRKTRQMLL 802


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 167/641 (26%), Positives = 300/641 (46%), Gaps = 59/641 (9%)

Query: 5   VYSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNV 63
            Y+++ M ++A+    KM+E+   K  I++YN+LL                         
Sbjct: 87  AYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALL------------------------- 121

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             N+ +   L +++   ++ L   ET G    P++ + N ++    K      AKGL   
Sbjct: 122 --NAFIEANLLEKA---ESFLAYFETVG--ILPNLQTYNILIKISVKKRQFVEAKGLLDW 174

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M    L PD +SY  +I+G+  +G +  ALE  ++M   G+ PD + Y+I+  GF     
Sbjct: 175 MWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGD 234

Query: 184 -ISGAWKVIQKLLIKGS--DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
            + G  K I + L+KGS   P++VTY V+I G C++G  +E L++ E M     ++++  
Sbjct: 235 YVQG--KEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFT 292

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS L+  +C  G +D A+ +  EM    +  D+VTY+ L+ G C+  K+ ++ +L+  M 
Sbjct: 293 YSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW-VMM 351

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K    N  ++   + GL E   + EA   ++ L       D   Y ++I G  K G++ 
Sbjct: 352 GKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLN 411

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A+++ ++  +         ++S++ G  K G+V +A  ++  +  +G E S       +
Sbjct: 412 KALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLI 471

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N +     ++  +   +EMETK   PT V+Y  +I GLCK  +  +A   +++M      
Sbjct: 472 NGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWK 531

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD ITY+ ++   C+ K +  A  L  Q+ +  LEP    +NIL+ GLC  G +++A  L
Sbjct: 532 PDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLL 591

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
             ++++ N     V + T++        ++KA    C+M                +  M 
Sbjct: 592 YSNMKQSNCLPNLVTHNTLMDG------LYKARE--CEM------------ASVIWACMF 631

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            NGF PD     + L      G +     L    +K+G+LP
Sbjct: 632 KNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILP 672



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 142/564 (25%), Positives = 285/564 (50%), Gaps = 7/564 (1%)

Query: 3   AFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSET 59
           AF+     ++  A   +A  + + +  ++QTYN L+      R       L D +   + 
Sbjct: 123 AFI--EANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDL 180

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             +VY+   VI+G+ +   L  A+    E   +   P V+  N ++  + K G     K 
Sbjct: 181 KPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKE 240

Query: 120 LFCLMLKYG-LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
           ++  ++K   ++P+  +YN++I+GLC  G  +E+LE    M ++  E D  TYS L  G 
Sbjct: 241 IWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGL 300

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             +  + GA +V ++++ +    D+VTY  L+ G+C+ G ++E  +L  VM+ +    NV
Sbjct: 301 CDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW-VMMGKENCHNV 359

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           ++Y++ +  + ++ +++EA+ +   +   G   D  TY +LI GLCK   ++KA+++  E
Sbjct: 360 VSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKE 419

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
                   ++FA+ +I+ GL ++  + EA      +    C     + N +I+G+V+   
Sbjct: 420 AKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASK 479

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EA+  +R++  K  SP++V++N+LI G CK  + +DA   +  +     +P  +TY+ 
Sbjct: 480 LEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSL 539

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            M+  C+   I   L L +++  K + P    + +++ GLC   K+++A+ L  +M    
Sbjct: 540 LMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSN 599

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
             P+ +T+NT++    K ++   A  +   M+ +  +P   +YNI + GLC  G + +  
Sbjct: 600 CLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGI 659

Query: 539 CLLVSLQEHNISLTKVAYTTIIKA 562
            L     ++ I  T + +  +++A
Sbjct: 660 ALFDDALKNGILPTSITWYILVRA 683



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 226/434 (52%), Gaps = 1/434 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T +++I+GLC+  R  +++   +     E    + + ++++   C +G  + A  ++
Sbjct: 254 NVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVY 313

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+K  +  D  +YN L++G C AG ++E+ E    MG+     + ++Y+I  +G    
Sbjct: 314 KEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFEN 372

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  V + L  +GS  D  TY VLI G C+ G++ + LK+ +     G KL+  AY
Sbjct: 373 RKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAY 432

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S ++  + K GR+DEALG++++M+  G +      + LI G  +  K+ +AI  + EM +
Sbjct: 433 SSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMET 492

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K  SP   ++  ++ GLC+ E  ++A  +   ++  +   D++ Y++++DG  +   I  
Sbjct: 493 KGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDM 552

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ L+RQ++ K + P +   N L++G C  GK+ DA  L   +K     P+ VT+ T M+
Sbjct: 553 ALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMD 612

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
              +    +    +   M      P  ++Y + +KGLC   ++ + + L +D    G+ P
Sbjct: 613 GLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILP 672

Query: 482 DQITYNTIIRSFCK 495
             IT+  ++R+  K
Sbjct: 673 TSITWYILVRAVLK 686



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 219/428 (51%), Gaps = 4/428 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
           + G   +++ +  +MK+ + ++ + TY+SL   L ++ + D   ++Y ++       +V 
Sbjct: 267 KMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVV 326

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +++G C+  +++++   L    GKE   +VVS N  +    +    E A  ++ L+
Sbjct: 327 TYNALLNGFCRAGKIKES-FELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELL 385

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G   D+ +Y +LIHGLC  G + +AL+   +    G + DA  YS +  G     ++
Sbjct: 386 RRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRV 445

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  ++ ++   G +        LI G+ +   +EE +     M ++G    V++Y+ L
Sbjct: 446 DEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTL 505

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++ +CK+ R  +A   + EM     KPD++TYS+L+ GLC+  K+  A+ L+ ++  K +
Sbjct: 506 INGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGL 565

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+   H  ++ GLC    I +A + + ++  SNC+ ++V +N ++DG  K      A  
Sbjct: 566 EPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASV 625

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           ++  + +    P I+++N  + G C  G+++D   L D    +G+ P+++T+   + A  
Sbjct: 626 IWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVL 685

Query: 425 EEGNIQRL 432
           + G +  L
Sbjct: 686 KLGPLDSL 693



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/496 (23%), Positives = 231/496 (46%), Gaps = 17/496 (3%)

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G +P   +Y+ L   F   + +  A   +      G  P++ TY +LI    +     E 
Sbjct: 109 GCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEA 168

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
             L + M S+  K +V +Y  +++ M KSG +  AL +  EM   GL PD++ Y+I+I G
Sbjct: 169 KGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDG 228

Query: 283 LCKQDKVHKAIQLYNEMCSKR-ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
             K+    +  +++  +     + PN   +  ++ GLC+     E+   ++ +  + C  
Sbjct: 229 FFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEM 288

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D+  Y+ +I G   +GN+  AV++Y++++++ +   +VT+N+L+ GFC+ GK+ ++  L 
Sbjct: 289 DLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW 348

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +       + V+Y  F+    E   ++  +++ + +  +  G    TY V+I GLCK 
Sbjct: 349 VMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKN 407

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
             L +A+++L++    G   D   Y++I+    K   + +A  +++QM  +  E +    
Sbjct: 408 GHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVC 467

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N LI+G      L+ A C    ++    S T V+Y T+I   C       A +F  +M+E
Sbjct: 468 NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLE 527

Query: 582 KGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
           K ++  +  Y+                + +  +L  G  PD  +  +++      G +  
Sbjct: 528 KDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIED 587

Query: 627 VFELAAVMIKSGLLPD 642
              L + M +S  LP+
Sbjct: 588 ALLLYSNMKQSNCLPN 603


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 158/645 (24%), Positives = 288/645 (44%), Gaps = 65/645 (10%)

Query: 5   VYSRTGMVHDAVFVIAKMKEL-DLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETP 60
            Y+ +G +  AV +   + EL D    +   NSLL  L  +  + D   +YD++      
Sbjct: 143 AYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDS 202

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            + Y+  I++ G+C + +++     ++   GK   P++V  N I+  YCKLG  E A  +
Sbjct: 203 VDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLV 262

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP-----DAITYSILA 175
           F  +   G  P   ++  +I+G C  G    +    +++   G+       + I  +   
Sbjct: 263 FKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYR 322

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
            G+ +    S  W     ++     PD+ TY +LI   C+ G  E  +   +    +G  
Sbjct: 323 HGYKVDPAESIGW-----IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            N ++Y+ L+ + CKS   D A  LL +M   G KPD+VTY ILI GL     +  A+ +
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
             ++  + +SP++  +  ++ GLC+      A++ F  ++  N + D  +Y  +IDG+++
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G+  EA +++   +EK +   +V  N++I GFC++G + +A   ++ +    L P   T
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y+T ++ Y ++ ++   + + + ME     P  VTYT +I G C Q   + A +  ++M 
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617

Query: 476 VIGVTPDQITYNTIIRSFCK-CKDLRKAFQLLNQMWLHNLEPTSATYNILIDG------- 527
           +  + P+ +TY T+IRS  K    L KA      M  +   P   T+N L+ G       
Sbjct: 618 LRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSG 677

Query: 528 ------------------------------------------LCVNGDLKNADCLLVSLQ 545
                                                     LCV+G +K A      + 
Sbjct: 678 KVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMV 737

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTF-FCQMVEKGFEISIR 589
           +   S   V++  I+   C  G+  +     FC + EKG E+++R
Sbjct: 738 KKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVR 782



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 123/498 (24%), Positives = 222/498 (44%), Gaps = 37/498 (7%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V++ N+++S   K      A+ ++  M   G   D +S  IL+ G+C  G +E   + 
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
                  G  P+ + Y+ +  G+  L  I  A+ V ++L +KG  P + T+  +I G+C+
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG-RIDEALGLLYEMEAVGLKPDLV 274
            G+     +L   +  +G +++V   + ++ +  + G ++D A  + + + A   KPD+ 
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWII-ANDCKPDVA 346

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+ILI  LCK+ K   A+   +E   K + PN+ ++  ++   C+ +            
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE----------- 395

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                      Y+I             A +L  Q+ E+   P IVT+  LI+G   +G +
Sbjct: 396 -----------YDI-------------ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHM 431

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            DA  +   +   G+ P A  Y   M+  C+ G       L  EM  + I P    Y  +
Sbjct: 432 DDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATL 491

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I G  +     EA ++       GV  D + +N +I+ FC+   L +A   +N+M   +L
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P   TY+ +IDG     D+  A  +   ++++      V YT++I   C +GD   A  
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEE 611

Query: 575 FFCQMVEKGFEISIRDYT 592
            F +M  +    ++  YT
Sbjct: 612 TFKEMQLRDLVPNVVTYT 629



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 194/452 (42%), Gaps = 56/452 (12%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL-YEMEAVGLKPDLVTYSILIRGLCKQD 287
           + ++  KL   A S +L +  +SG + +A+ +  Y +E     PD++  + L+  L K  
Sbjct: 125 LRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSR 184

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           ++  A ++Y+EMC +  S ++++   ++ G+C +  +   R   +      CI ++V YN
Sbjct: 185 RLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYN 244

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I GY KLG+I  A  ++++L  K   P++ TF ++I GFCK G    + RLL  +K  
Sbjct: 245 TIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKER 304

Query: 408 GL-----------------------------------EPSAVTYTTFMNAYCEEGNIQRL 432
           GL                                   +P   TY   +N  C+EG  +  
Sbjct: 305 GLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVA 364

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           +  L E   K + P +++Y  +I+  CK  +   A +LL  M   G  PD +TY  +I  
Sbjct: 365 VGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHG 424

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
                 +  A  +  ++    + P +A YN+L+ GLC  G    A  L   + + NI   
Sbjct: 425 LVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPD 484

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE 612
              Y T+I      GD  +A   F   VEKG ++ +  +                     
Sbjct: 485 AYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHN-------------------- 524

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
            M+  F + G L         M +  L+PDKF
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLVPDKF 556



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/525 (23%), Positives = 229/525 (43%), Gaps = 108/525 (20%)

Query: 18  VIAKMKELDLKVSIQTYNSLL-YNLRH-------TDIMWDLYDDIKVSETPRNVYTNSIV 69
           +++++KE  L+VS+   N+++    RH         I W + +D K      +V T +I+
Sbjct: 297 LLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCK-----PDVATYNIL 351

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           I+ LC++ + + A+ FL E + K   P+ +S   ++  YCK    ++A  L   M + G 
Sbjct: 352 INRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC 411

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            PD  +Y ILIHGL ++G M++A+     +   GV PDA  Y++L  G     +   A  
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           +  ++L +   PD   Y  LI G+ + G+ +E  K+  + + +G K++V+ ++ ++   C
Sbjct: 472 LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           +SG +DEAL  +  M    L PD  TYS +I G  KQ  +  AI+++  M   +  PN  
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591

Query: 310 AHGAILLGLC------------------------------------EKEMITEARMYFDS 333
            + +++ G C                                    E   + +A  Y++ 
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWEL 651

Query: 334 LIMSNCIQDVVLYNIMIDGYVKL------------------------------------- 356
           ++ + C+ + V +N ++ G+VK                                      
Sbjct: 652 MMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAA 711

Query: 357 ------------GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL-LDT 403
                       G +  A     ++++K  SP  V+F ++++GFC  G     R +    
Sbjct: 712 AYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCN 771

Query: 404 IKLHGLEPSAVTYTTFMNAY------CEEGNIQRLLALLQEMETK 442
           +   GLE  AV Y+  +  +      CE   I  L A++++ +TK
Sbjct: 772 LGEKGLE-VAVRYSQVLEQHLPQPVICEASTI--LHAMVEKADTK 813



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 162/361 (44%), Gaps = 22/361 (6%)

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +++  + +H  +L    E   +++A   +D ++ + + + DV+  N ++   VK   +G+
Sbjct: 131 KLTHEALSH--VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGD 188

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A ++Y ++ ++  S    +   L+ G C  GKV   R+L++     G  P+ V Y T + 
Sbjct: 189 ARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIG 248

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC+ G+I+    + +E++ K   PT  T+  +I G CK+     + +LL ++   G+  
Sbjct: 249 GYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRV 308

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWL--HNLEPTSATYNILIDGLCVNGDLKNADC 539
                N II +  K +   K     +  W+  ++ +P  ATYNILI+ LC  G  + A  
Sbjct: 309 SVWFLNNIIDA--KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVG 366

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY-------- 591
            L    +  +    ++Y  +I+A+C   +   A     QM E+G +  I  Y        
Sbjct: 367 FLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLV 426

Query: 592 -------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                    +    ++  G  PD  I  +++    + G       L + M+   +LPD +
Sbjct: 427 VSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAY 486

Query: 645 L 645
           +
Sbjct: 487 V 487



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/322 (20%), Positives = 128/322 (39%), Gaps = 60/322 (18%)

Query: 3   AFVYS-------RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDL---YD 52
           A+VY+       R+G   +A  V +   E  +KV +  +N+++     + ++ +     +
Sbjct: 485 AYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMN 544

Query: 53  DIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
            +       + +T S +IDG  +Q  +  AI   +     +  P+VV+  ++++ +C  G
Sbjct: 545 RMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQG 604

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS-MEEALEFTNDMGRHGVEPDAITY 171
             ++A+  F  M    L P+  +Y  LI  L    S +E+A+ +   M  +   P+ +T+
Sbjct: 605 DFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTF 664

Query: 172 SILAKGF--------------------HLLSQI-----SGAWK----------------- 189
           + L +GF                     L S+      S  W                  
Sbjct: 665 NCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHG 724

Query: 190 -------VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
                     K++ KG  PD V++  ++ G+C +GN ++   +    L +      + YS
Sbjct: 725 MVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVRYS 784

Query: 243 VLLSSMCKSGRIDEALGLLYEM 264
            +L        I EA  +L+ M
Sbjct: 785 QVLEQHLPQPVICEASTILHAM 806


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 243/495 (49%), Gaps = 15/495 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + +IDG C+  RL DA+  +   A     P   + N ++   C     E A+ L 
Sbjct: 157 NVVTYTALIDGYCRSGRLDDALRLI---ASMPVAPDTYTYNTVLKGLCIAKKWEEAEELM 213

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M++    P+  ++   I   C  G ++ A++  + M R+G  PD + YS L  GF   
Sbjct: 214 AEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQ 273

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A  ++  +L K   P+ V Y   + G C     E+  +L   M+ +G   N   +
Sbjct: 274 GHVDQALDLLNTMLCK---PNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATF 330

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S+L+SS+C++  +D A+ +L +ME  G +PD V Y+I+I  L ++ +V  A++L N M  
Sbjct: 331 SMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVC 390

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   P++    A+L G C  E   +A      +   +C    + +NI+ID   + G +  
Sbjct: 391 K---PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNY 447

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A Q++ Q+   R +P IVT++SL+ GF + G V  A +L  ++     +P   +Y   + 
Sbjct: 448 ATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLK 504

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C     +    L+ EM  K   P  VT+ ++I  LC++  +  A+++LE M   G TP
Sbjct: 505 GLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTP 564

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D  TYN +I  F +   L  A +LL+ M   + +P + +YN  + GLC     ++A+ L+
Sbjct: 565 DIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELV 621

Query: 542 VSLQEHNISLTKVAY 556
             +  +  +  +V +
Sbjct: 622 AEMLRNKCTPNEVTF 636



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 235/485 (48%), Gaps = 20/485 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y R+G + DA+ +IA M    +     TYN++L  L    +  +    + + I+ +  P 
Sbjct: 168 YCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIR-NRCPP 223

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T +  I   CQ   L  A+  L +       P VV  + +++ + + G  + A  L 
Sbjct: 224 NEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLL 283

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML     P+   YN  + GLCIA   E+  E   +M R G  P+  T+S+L       
Sbjct: 284 NTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQN 340

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           + +  A +V++++   G +PD V Y ++I    + G V++ L+L   M+    K + + +
Sbjct: 341 NLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVC---KPDALGF 397

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +L   C++ R  +A  L+ +M         +T++ILI  LC+   V+ A Q++ +M  
Sbjct: 398 NAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPR 457

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
            R +P+   + ++L G  E+ ++  A   F S+    C  D+  YN ++ G  +     +
Sbjct: 458 YRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWED 514

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +L  +++ K   P+ VTFN LI   C+ G V  A  +L+ +  +G  P   TY   +N
Sbjct: 515 AGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALIN 574

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            + E+G +   L LL  M  K   P  ++Y   +KGLC+  + Q+A +L+ +M     TP
Sbjct: 575 GFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTP 631

Query: 482 DQITY 486
           +++T+
Sbjct: 632 NEVTF 636



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 239/521 (45%), Gaps = 14/521 (2%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+I  LC   RL DA   L            VS N +++ YC+ G    A+ +      
Sbjct: 94  NILIKKLCATGRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGAARA 152

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G   +  +Y  LI G C +G +++AL     M    V PD  TY+ + KG  +  +   
Sbjct: 153 TGAA-NVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWEE 208

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +++ +++     P+ VT+   I  +CQ G ++  ++L + M   G   +V+ YS L++
Sbjct: 209 AEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLIN 268

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
              + G +D+AL LL  M     KP+ V Y+  ++GLC  ++     +L  EM  K  SP
Sbjct: 269 GFSEQGHVDQALDLLNTMLC---KPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSP 325

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N      ++  LC+  ++  A    + +    C  D V YNI+I+   + G + +A++L 
Sbjct: 326 NEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLL 385

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             ++ K   P  + FN+++ GFC+  +  DA  L+  +         +T+   ++  C+ 
Sbjct: 386 NSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQN 442

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +     + ++M      P  VTY+ ++ G  +Q  ++ A+QL   M      PD  +Y
Sbjct: 443 GLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSY 499

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           N +++  C+      A +L+ +M   +  P   T+NILI+ LC  G +  A  +L  +  
Sbjct: 500 NAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPN 559

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           +  +     Y  +I     +G +  A+     M  K   IS
Sbjct: 560 YGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCKPDAIS 600



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 217/456 (47%), Gaps = 22/456 (4%)

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           V++  L+ GYC+ G + +  ++     + G   NV+ Y+ L+   C+SGR+D+AL L+  
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGAARATG-AANVVTYTALIDGYCRSGRLDDALRLIAS 183

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M    + PD  TY+ +++GLC   K  +A +L  EM   R  PN       +   C+  +
Sbjct: 184 MP---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           +  A    D +    C  DVV+Y+ +I+G+ + G++ +A+ L   ++ K   P+ V +N+
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYNA 297

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
            + G C   +  D   L+  +   G  P+  T++  +++ C+   +   + +L++ME   
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             P  V Y ++I  L ++ ++ +A++LL  M      PD + +N +++ FC+ +    A 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMVC---KPDALGFNAVLKGFCRAERWHDAS 414

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           +L+ QM+  +      T+NILID LC NG +  A  +   +  +  +   V Y++++   
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 474

Query: 564 CAEGDVHKAMTFFCQM-----------VEKGFEISIR-DYTKSFFCMMLSNGFPPDQEIC 611
             +G V  A+  F  M           V KG   + R +        M+    PP++   
Sbjct: 475 SEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTF 534

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            +++ +  Q G +    E+   M   G  PD F  N
Sbjct: 535 NILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYN 570



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 131/285 (45%), Gaps = 25/285 (8%)

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI---QRLLAL 435
           ++ N LI   C  G++ADA R+LD +K       AV++ T +  YC +G +   +R+L  
Sbjct: 91  ISCNILIKKLCATGRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLG- 148

Query: 436 LQEMETKAIGPTHV-TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
                 +A G  +V TYT +I G C+  +L +A++L+  M    V PD  TYNT+++  C
Sbjct: 149 ----AARATGAANVVTYTALIDGYCRSGRLDDALRLIASM---PVAPDTYTYNTVLKGLC 201

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
             K   +A +L+ +M  +   P   T+   I   C NG L  A  LL  +  +  +   V
Sbjct: 202 IAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVV 261

Query: 555 AYTTIIKAHCAEGDVHKAM----TFFCQ-------MVEKGFEISIR-DYTKSFFCMMLSN 602
            Y+T+I     +G V +A+    T  C+          KG  I+ R +        M+  
Sbjct: 262 IYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRK 321

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           G  P++    +++ +  Q   + S  E+   M K G  PD    N
Sbjct: 322 GCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYN 366


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 160/632 (25%), Positives = 287/632 (45%), Gaps = 46/632 (7%)

Query: 9    TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYT 65
             G +  A+     M+E +  + I  YN +++ L   D +   W+L+  + V     +  T
Sbjct: 399  NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458

Query: 66   NSIVIDGLCQ---------------------QSRLQDAILFLQETAGKEFGPSVVSL--- 101
             +I+I GLC+                     Q   +D  L    ++ KE   S+  +   
Sbjct: 459  YTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWER 518

Query: 102  ---NAI-MSRYCKLGFAEVAKGLF---CLMLKYGLHPD-----AFS-------YNILIHG 142
               N   M R   + F+   KG      L+L+ G +P+     +FS       Y   +  
Sbjct: 519  SKSNPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRN 578

Query: 143  LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
                   ++A     +M +    P  + ++ +      +++      +  K+   G   D
Sbjct: 579  ELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHD 638

Query: 203  IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
            + ++T+LI  +C+   +   L L   M+  GF+ +++    LL+  C+  R  EA+ L+ 
Sbjct: 639  LYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD 698

Query: 263  EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
             M+  G  P++V Y+ +I GLCK   ++ A++++  M  K I  ++  +  ++ GL    
Sbjct: 699  SMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 758

Query: 323  MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
              T+A      ++      +V+ +  +ID +VK GN+ EA  LY+++I + + P++ T+N
Sbjct: 759  RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYN 818

Query: 383  SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
            SLI GFC +G + DA+ + D +   G  P  VTY T +  +C+   ++  + L  EM  +
Sbjct: 819  SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 878

Query: 443  AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
             +     TY  +I G C+  KL  A ++   M   GV+PD +TYN ++   C    + KA
Sbjct: 879  GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 938

Query: 503  FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
              ++  +    ++    TYNI+I GLC    LK A CL  SL    +    +AY T+I  
Sbjct: 939  LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 998

Query: 563  HCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
             C +G   +A     +M E GF  S R Y ++
Sbjct: 999  LCRKGLQREADKLCRRMKEDGFMPSERIYDET 1030



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 255/518 (49%), Gaps = 13/518 (2%)

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           E A  LF  M+     P    +  L+         E  + F+  M  +G+  D  +++IL
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
              F   S++S A  V+ K++  G +P IVT+  L+ G+C +  + +   L  +M+  G+
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           + NV+ Y+ L+  +CK+G ++ AL LL EME  GL  D+VTY+ L+ GLC   +   A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           +  +M  + I+P+     A++    ++  + EA+  +  +I S+   + V YN +I+G  
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
             G + +A + +  +  K   P++VT+N+LI GFCK   V +  +L   +   G      
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TY T ++ YC+ G ++  L +   M ++ + P  +T+ +++ GLC   +++ A+   +DM
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
                    + YN +I   CK   + KA++L  ++ +  ++P + TY I+I GLC NG  
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG-----------DVHKAMTFFCQ-MVEK 582
           + AD L+  ++E  I     A    ++ H +             +  K+  F+ Q ++  
Sbjct: 473 READELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPI 532

Query: 583 GFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
            F  S++ + +  + ++L  G  P+  +      A H 
Sbjct: 533 AFSSSVKGFVRRHY-LLLERGNNPETSLSRSFSGASHH 569



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 228/447 (51%)

Query: 117  AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
            A  LFC ML+    P    +  ++  +      +  +   + M   G+  D  +++IL  
Sbjct: 588  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 647

Query: 177  GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
             F   S++S A  ++ K++  G  P IVT   L+ G+CQ    +E + L + M   GF  
Sbjct: 648  CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 707

Query: 237  NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            NV+ Y+ +++ +CK+  ++ AL + Y ME  G++ D VTY+ LI GL    +   A +L 
Sbjct: 708  NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 767

Query: 297  NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             +M  ++I PN     A++    ++  + EAR  +  +I  + + +V  YN +I+G+   
Sbjct: 768  RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 827

Query: 357  GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
            G +G+A  ++  ++ K   P +VT+N+LI GFCK+ +V D  +L   +   GL   A TY
Sbjct: 828  GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 887

Query: 417  TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
             T ++ YC+ G +     +   M    + P  VTY +++  LC   K+++A+ ++ED+  
Sbjct: 888  NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 947

Query: 477  IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
              +  D ITYN II+  C+   L++A+ L   +    ++P +  Y  +I GLC  G  + 
Sbjct: 948  SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE 1007

Query: 537  ADCLLVSLQEHNISLTKVAYTTIIKAH 563
            AD L   ++E     ++  Y   ++ H
Sbjct: 1008 ADKLCRRMKEDGFMPSERIYDETLRDH 1034



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 155/616 (25%), Positives = 274/616 (44%), Gaps = 68/616 (11%)

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           G     R +DA     E    +  PS+V    +++    L   E        M  YG+  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D +S+ ILIH  C    +  AL     M + G EP  +T+  L  GF L+++I  A+ ++
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             ++  G +P++V Y  LI G C+ G +   L+L   M  +G   +V+ Y+ LL+ +C S
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           GR  +A  +L +M    + PD+VT++ LI    KQ  + +A +LY EM    + PN+  +
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
            +I+ GLC    + +A+  FD +    C  +VV YN +I G+ K   + E ++L++++  
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADA---------RR-----LLDTIKLHGLEPSA---- 413
           +  +  I T+N+LI+G+C+ GK+  A         RR     +   I LHGL  +     
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404

Query: 414 -----------------VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
                            V Y   ++  C+   +++   L   +  + + P   TYT++I 
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK-----DLRKAFQL--LNQM 509
           GLCK    +EA +L+  M   G+       +  +             LR+ ++    N  
Sbjct: 465 GLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPF 524

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV--------AYTTIIK 561
           W+  L P + + +       V G ++    LL        SL++          Y   ++
Sbjct: 525 WMQRLIPIAFSSS-------VKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLR 577

Query: 562 A--HCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
              HC + D   A + FC+M++     SI D+T+    +   N F       ++++  +H
Sbjct: 578 NELHCIKFD--DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKF-------DIVIYLYH 628

Query: 620 QGGDLGSVFELAAVMI 635
           +  +LG   +L +  I
Sbjct: 629 KMENLGISHDLYSFTI 644



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 168/700 (24%), Positives = 303/700 (43%), Gaps = 63/700 (9%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
            + +  MV + + +  +M        I TYN+L++    +    +  D++  +       +
Sbjct: 326  FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            + T+ I++ GLC    ++ A++   +    E    +V+ N ++   CK    E A  LFC
Sbjct: 386  IITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFC 445

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV------EPDAIT-YSILA 175
             +   G+ PDA +Y I+I GLC  G   EA E    M   G+      E D +  +S   
Sbjct: 446  RLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSN 505

Query: 176  KGFHLL------------------------SQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
            K   L                         S + G  +    LL +G++P+  + +    
Sbjct: 506  KEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPE-TSLSRSFS 564

Query: 212  GYCQIGNVEEGLK--LREVMLSQGFKL-----------NVIAYSVLLSSMCKSGRIDEAL 258
            G     +  E L+  L  +     F L           +++ ++ +L+ + K  + D  +
Sbjct: 565  GASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVI 624

Query: 259  GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
             L ++ME +G+  DL +++ILI   C+  ++  A+ L  +M      P+    G++L G 
Sbjct: 625  YLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGF 684

Query: 319  CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
            C+     EA    DS+     + +VV+YN +I+G  K  ++  A++++  + +K I    
Sbjct: 685  CQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADA 744

Query: 379  VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
            VT+N+LI G   +G+  DA RLL  +    ++P+ + +T  ++ + +EGN+     L +E
Sbjct: 745  VTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKE 804

Query: 439  METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
            M  +++ P   TY  +I G C    L +A  + + M   G  PD +TYNT+I  FCK K 
Sbjct: 805  MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 864

Query: 499  LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
            +    +L  +M    L   + TYN LI G C  G L  A  +   + +  +S   V Y  
Sbjct: 865  VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 924

Query: 559  IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------------KSFFCMMLS---NG 603
            ++   C  G + KA+     + +   ++ I  Y             K  +C+  S    G
Sbjct: 925  LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 984

Query: 604  FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
              PD      M+    + G      +L   M + G +P +
Sbjct: 985  VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 1024



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 169/669 (25%), Positives = 283/669 (42%), Gaps = 34/669 (5%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDD-IKVSETPRNVY 64
           +G   DA  ++  M +  +   + T+ +L+       + D   +LY + I+ S  P NV 
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            NSI I+GLC   RL DA       A K   P+VV+ N ++S +CK    +    LF  M
Sbjct: 284 YNSI-INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G + D F+YN LIHG C  G +  AL+    M    V PD IT+ IL  G  +  +I
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A      +        IV Y ++I G C+   VE+  +L   +  +G K +   Y+++
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +CK+G   EA  L+  M+  G+   +   +     L +    +K I L      +R 
Sbjct: 463 ILGLCKNGPRREADELIRRMKEEGI---ICQMNAEDDHLEEHSSSNKEISLSLREIWERS 519

Query: 305 SPNSF--------AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL---YNIMIDGY 353
             N F        A  + + G   +  +   R       +S           Y   +   
Sbjct: 520 KSNPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNE 579

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           +      +A  L+ ++++ R  PSIV F  ++    K  K      L   ++  G+    
Sbjct: 580 LHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDL 639

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            ++T  ++ +C    +   LALL +M      P+ VT   ++ G C+  + QEAV L++ 
Sbjct: 640 YSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS 699

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G  P+ + YNT+I   CK +DL  A ++   M    +   + TYN LI GL  +G 
Sbjct: 700 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 759

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT- 592
             +A  LL  + +  I    + +T +I     EG++ +A   + +M+ +    ++  Y  
Sbjct: 760 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 819

Query: 593 --------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSG 638
                         K  F +M+S G  PD      ++  F +   +    +L   M   G
Sbjct: 820 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 879

Query: 639 LLPDKFLIN 647
           L+ D F  N
Sbjct: 880 LVGDAFTYN 888



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 208/467 (44%), Gaps = 20/467 (4%)

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L  GF    +   A+ +  +++     P IV +T L+     +   E  +   + M   G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              ++ ++++L+   C+  R+  AL +L +M  +G +P +VT+  L+ G C  +++  A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            L   M      PN   +  ++ GLC+   +  A    + +       DVV YN ++ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
              G   +A ++ R ++++ I+P +VTF +LI  F K G + +A+ L   +    ++P+ 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTY + +N  C  G +         M +K   P  VTY  +I G CK   + E ++L + 
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G   D  TYNT+I  +C+   LR A  +   M    + P   T+ IL+ GLCVNG+
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           +++A      ++E    +  VAY  +I   C    V KA   FC++              
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP------------- 448

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                    G  PD     +M++   + G      EL   M + G++
Sbjct: 449 -------VEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 212/412 (51%)

Query: 45   DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
            DI+  LY  ++      ++Y+ +I+I   C+ SRL  A+  L +     F PS+V+L ++
Sbjct: 621  DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 680

Query: 105  MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
            ++ +C+    + A  L   M  +G  P+   YN +I+GLC    +  ALE    M + G+
Sbjct: 681  LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI 740

Query: 165  EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
              DA+TY+ L  G     + + A ++++ ++ +  DP+++ +T LI  + + GN+ E   
Sbjct: 741  RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN 800

Query: 225  LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
            L + M+ +    NV  Y+ L++  C  G + +A  +   M + G  PD+VTY+ LI G C
Sbjct: 801  LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFC 860

Query: 285  KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
            K  +V   ++L+ EM  + +  ++F +  ++ G C+   +  A+  F+ ++      D+V
Sbjct: 861  KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV 920

Query: 345  LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
             YNI++D     G I +A+ +   L +  +   I+T+N +I G C+  K+ +A  L  ++
Sbjct: 921  TYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 980

Query: 405  KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
               G++P A+ Y T ++  C +G  +    L + M+     P+   Y   ++
Sbjct: 981  TRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 1032



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/449 (23%), Positives = 200/449 (44%), Gaps = 35/449 (7%)

Query: 78   RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
            +  DA     E       PS+V    +++   K+   ++   L+  M   G+  D +S+ 
Sbjct: 584  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 138  ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
            ILIH  C    +  AL     M + G  P  +T   L  GF   ++   A  ++  +   
Sbjct: 644  ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 198  GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
            G  P++V Y  +I G C+  ++   L++   M  +G + + + Y+ L+S +  SGR  +A
Sbjct: 704  GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 258  LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
              LL +M    + P+++ ++ LI    K+  + +A  LY EM  + + PN F + +++ G
Sbjct: 764  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 318  LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI--------------------------- 350
             C    + +A+  FD ++   C  DVV YN +I                           
Sbjct: 824  FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883

Query: 351  --------DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
                     GY + G +  A +++ ++++  +SP IVT+N L+   C NGK+  A  +++
Sbjct: 884  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 943

Query: 403  TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
             ++   ++   +TY   +   C    ++    L + +  K + P  + Y  +I GLC++ 
Sbjct: 944  DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1003

Query: 463  KLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              +EA +L   M   G  P +  Y+  +R
Sbjct: 1004 LQREADKLCRRMKEDGFMPSERIYDETLR 1032



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 140/332 (42%), Gaps = 15/332 (4%)

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +A   F  ++ S  +  +V +  ++     L      +   +++    IS  + +F  LI
Sbjct: 54  DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
           + FC+  +++ A  +L  +   G EPS VT+ + ++ +C    I    +L+  M      
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  V Y  +I GLCK  +L  A++LL +M   G+  D +TYNT++   C       A ++
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           L  M   ++ P   T+  LID     G+L  A  L   + + ++    V Y +II   C 
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MMLSNGFPPDQEI 610
            G ++ A   F  M  KG   ++  Y    S FC              M   GF  D   
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              ++  + Q G L    ++   M+   + PD
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 108/261 (41%), Gaps = 20/261 (7%)

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           GF  + +  DA  L   +      PS V +T  + A       + ++   Q+ME   I  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              ++T++I   C+  +L  A+ +L  M  +G  P  +T+ +++  FC    +  AF L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
             M     EP    YN LIDGLC NG+L  A  LL  +++  +    V Y T++   C  
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
           G    A               +RD        M+     PD      ++  F + G+L  
Sbjct: 225 GRWSDAARM------------LRD--------MMKRSINPDVVTFTALIDVFVKQGNLDE 264

Query: 627 VFELAAVMIKSGLLPDKFLIN 647
             EL   MI+S + P+    N
Sbjct: 265 AQELYKEMIQSSVDPNNVTYN 285


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/395 (34%), Positives = 207/395 (52%), Gaps = 1/395 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVV-SLNAIMSRYCKLGFAEVAKGL 120
           N YT   +I+GLC+      AIL+L++  G+     VV + + IM   CK G    A  L
Sbjct: 175 NSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNL 234

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M   G+ PD  +YN LIHGLC  G  +EA     +M R G+ P+  T+++L   F  
Sbjct: 235 FSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCK 294

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              IS A  ++  ++  G +PD+VTY  +I G+C +  + + +K+ E+M+ +GF  N++ 
Sbjct: 295 DGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVT 354

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS L+   CK+  I++AL LL EM   GL PD+VT+S LI G CK  K   A +L+  M 
Sbjct: 355 YSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMH 414

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
                PN      IL GL + +  +EA   F  +   N   +VV+YNI++DG    G + 
Sbjct: 415 EHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLN 474

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A +L+  L  K I   +V + ++I G CK G + DA  LL  ++ +G  P+  TY  F+
Sbjct: 475 DAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFV 534

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
               +  +I R    L  M+ K +     T  ++I
Sbjct: 535 RGLLQRYDISRSTKYLLLMKGKGLSADATTTELLI 569



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 217/459 (47%), Gaps = 1/459 (0%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+ PD ++  I+I+ LC              M + GV+P  +T++ L  G      ++ A
Sbjct: 101 GIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARA 160

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV-IAYSVLLS 246
            +    L   G   +  TY  +I G C+ G+    +   E +  +   L+V IAYS ++ 
Sbjct: 161 ARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMD 220

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           S+CK G + EAL L   M + G++PDLV Y+ LI GLC   +  +A  L   M  K I P
Sbjct: 221 SLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMP 280

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N      ++   C+  MI+ A+     ++      DVV YN +I G+  L  +G+AV+++
Sbjct: 281 NVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVF 340

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             +I K   P++VT++SLI+G+CK   +  A  LL  +   GL P  VT++T +  +C+ 
Sbjct: 341 ELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKA 400

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G  +    L   M      P   T  +++ GL K     EA+ L  +M  + +  + + Y
Sbjct: 401 GKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIY 460

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           N ++   C    L  A +L + +    ++     Y  +I GLC  G L +A+ LL+ ++E
Sbjct: 461 NIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEE 520

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           +     +  Y   ++      D+ ++  +   M  KG  
Sbjct: 521 NGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLS 559



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 236/484 (48%), Gaps = 2/484 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P V +L  I++  C L        +  +M K G+ P   ++  LI+GLC  G++  A  F
Sbjct: 104 PDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARF 163

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV-TYTVLICGYC 214
            + +   G + ++ TY  +  G       SGA   ++K+  +  D D+V  Y+ ++   C
Sbjct: 164 ADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLC 223

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           + G V E L L   M S+G + +++AY+ L+  +C  GR  EA  LL  M   G+ P++ 
Sbjct: 224 KDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQ 283

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           T+++L+   CK   + +A  +   M    + P+   + +++ G C    + +A   F+ +
Sbjct: 284 TFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELM 343

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           I    + ++V Y+ +I G+ K  NI +A+ L  +++   ++P +VT+++LI GFCK GK 
Sbjct: 344 IHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKP 403

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
             A+ L  T+  H   P+  T    ++   +       ++L +EME   +    V Y +V
Sbjct: 404 EAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIV 463

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           + G+C   KL +A +L   +   G+  D + Y T+I+  CK   L  A  LL +M  +  
Sbjct: 464 LDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGC 523

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P   TYN+ + GL    D+  +   L+ ++   +S      T ++ ++ +    + A+ 
Sbjct: 524 LPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLS-ADATTTELLISYFSANKENSALH 582

Query: 575 FFCQ 578
            F Q
Sbjct: 583 VFLQ 586



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 223/498 (44%), Gaps = 56/498 (11%)

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A     K+++    P    +T L     ++ +    + L + + S G K +V   ++++
Sbjct: 54  AALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIII 113

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           + +C          +L  M  +G+ P +VT++ LI GLC +  V +A +  + +      
Sbjct: 114 NCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQ 173

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL-YNIMIDGYVKLGNIGEAVQ 364
            NS+ +GAI+ GLC+    + A +Y + +   NC  DVV+ Y+ ++D   K G + EA+ 
Sbjct: 174 SNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALN 233

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+  +  K I P +V +NSLI+G C  G+  +A  LL  +   G+ P+  T+   ++ +C
Sbjct: 234 LFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFC 293

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           ++G I R   ++  M    + P  VTY  VI G C   ++ +AV++ E M   G  P+ +
Sbjct: 294 KDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLV 353

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TY+++I  +CK K++ KA  LL +M    L P   T++ LI G C  G  + A  L  ++
Sbjct: 354 TYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTM 413

Query: 545 QEH-----------------------------------NISLTKVAYTTIIKAHCAEGDV 569
            EH                                   N+ L  V Y  ++   C+ G +
Sbjct: 414 HEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKL 473

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
           + A   F  +  KG +I +  YT                     M+    + G L     
Sbjct: 474 NDAQELFSCLPSKGIKIDVVAYT--------------------TMIKGLCKEGLLDDAEN 513

Query: 630 LAAVMIKSGLLPDKFLIN 647
           L   M ++G LP++F  N
Sbjct: 514 LLMKMEENGCLPNEFTYN 531



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 180/384 (46%), Gaps = 32/384 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + GMV +A+ + + M    ++  +  YNSL++                            
Sbjct: 224 KDGMVCEALNLFSGMTSKGIQPDLVAYNSLIH---------------------------- 255

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
               GLC   R ++A   L     K   P+V + N ++  +CK G    AK +   M+  
Sbjct: 256 ----GLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHV 311

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+ PD  +YN +I G C+   M +A++    M   G  P+ +TYS L  G+     I+ A
Sbjct: 312 GVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKA 371

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             ++ +++  G +PD+VT++ LI G+C+ G  E   +L   M       N+   +++L  
Sbjct: 372 LFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDG 431

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           + K     EA+ L  EME + L+ ++V Y+I++ G+C   K++ A +L++ + SK I  +
Sbjct: 432 LFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKID 491

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
             A+  ++ GLC++ ++ +A      +  + C+ +   YN+ + G ++  +I  + +   
Sbjct: 492 VVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLL 551

Query: 368 QLIEKRISPSIVTFNSLIYGFCKN 391
            +  K +S    T   LI  F  N
Sbjct: 552 LMKGKGLSADATTTELLISYFSAN 575



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 9/281 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP----- 60
           + + GM+  A  ++  M  + ++  + TYNS++    H  ++  + D +KV E       
Sbjct: 292 FCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISG--HC-LLSQMGDAVKVFELMIHKGF 348

Query: 61  -RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             N+ T S +I G C+   +  A+  L E       P VV+ + ++  +CK G  E AK 
Sbjct: 349 LPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKE 408

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           LFC M ++  HP+  +  I++ GL       EA+    +M +  +E + + Y+I+  G  
Sbjct: 409 LFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMC 468

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +++ A ++   L  KG   D+V YT +I G C+ G +++   L   M   G   N  
Sbjct: 469 SFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEF 528

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
            Y+V +  + +   I  +   L  M+  GL  D  T  +LI
Sbjct: 529 TYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLI 569



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 5/177 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR----HTDIMWDLYDDIKVSETPR 61
           + + G    A  +   M E D   ++QT   +L  L     H++ +  L+ +++      
Sbjct: 397 FCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAI-SLFREMEKMNLEL 455

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   +IV+DG+C   +L DA         K     VV+   ++   CK G  + A+ L 
Sbjct: 456 NVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLL 515

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             M + G  P+ F+YN+ + GL     +  + ++   M   G+  DA T  +L   F
Sbjct: 516 MKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYF 572


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 160/659 (24%), Positives = 298/659 (45%), Gaps = 20/659 (3%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVY 64
            + G V +A  V  +MK+  ++    +YNSL+      D +    +L++ + +     N Y
Sbjct: 368  QVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGY 427

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T  + I+   +      AI   +    K   P VV+ NA++    K G   +AK +F  +
Sbjct: 428  TYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHEL 487

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
               G+ PD  +Y ++I     A + +EA++  ++M      PD +  + L    +   + 
Sbjct: 488  KSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRG 547

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
            + AWK+  +L     DP   TY  L+ G  + G V+E + L E M S  +  N+I Y+ +
Sbjct: 548  NEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTV 607

Query: 245  LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
            L  +CK+G ++ ALG+LY M   G  PDL +Y+  + GL K+D++ +A +++ +M  K +
Sbjct: 608  LDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM-KKVL 666

Query: 305  SPNSFAHGAILLGLCEKEMITEARMYFDSLIM-SNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +P+      IL    +  ++ EA       I+      D   ++ +++G +K   + +++
Sbjct: 667  APDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSI 726

Query: 364  QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +    +   RI       + LI   CK+ K  +A  L+   +  G+     +Y   +   
Sbjct: 727  EFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGL 786

Query: 424  CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
             +E  I     L  EM+     P   TY +++  + K  ++++ +++ ++M+  G     
Sbjct: 787  VDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTY 846

Query: 484  ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            +TYNTII    K K L +A  L  ++      PT  TY  L+DGL  +G +++A+ L   
Sbjct: 847  VTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDE 906

Query: 544  LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------- 593
            + ++     +  Y  ++  +   G+  K    F  MV++G    I+ YT           
Sbjct: 907  MLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGR 966

Query: 594  -----SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                 S+F  +   G  PD     +++    + G L     L   M KSG+ P+ +  N
Sbjct: 967  LNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYN 1025



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 147/581 (25%), Positives = 261/581 (44%), Gaps = 5/581 (0%)

Query: 7    SRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNV 63
            S+     +A+ V ++M E      +   NSL   LY     +  W ++ ++K        
Sbjct: 507  SKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTD 566

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             T + ++ GL ++ ++++ +  L+E     + P++++ N ++   CK G    A G+   
Sbjct: 567  CTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYN 626

Query: 124  MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
            M   G  PD  SYN  +HGL     + EA      M +  + PD  T   +   F     
Sbjct: 627  MTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM-KKVLAPDYTTLCTILPSFVKNGL 685

Query: 184  ISGAWKVIQKLLIK-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            ++ A   +++ +++ GS  D  ++  L+ G  +   +E+ ++  E +      L+    S
Sbjct: 686  MNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLS 745

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             L+  +CKS +  EA  L+ + E++G+     +Y+ LI GL  ++ +  A  L++EM   
Sbjct: 746  PLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRL 805

Query: 303  RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
               P+ F +  IL  + +   I +       +         V YN +I G VK   + EA
Sbjct: 806  GCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEA 865

Query: 363  VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            + LY +L+ +  SP+  T+  L+ G  K+GK+ DA  L D +  +G +P+   Y   +N 
Sbjct: 866  MDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNG 925

Query: 423  YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            Y   GN +++  L Q M  + I P   +YTV+I  LC   +L +++     +  +G+ PD
Sbjct: 926  YRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPD 985

Query: 483  QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             ITYN +I    +   L +A  L N M    + P   TYN LI  L   G    A  +  
Sbjct: 986  LITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYE 1045

Query: 543  SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             L ++        Y  +I  +   G    A   + QM+  G
Sbjct: 1046 ELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGG 1086



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 151/573 (26%), Positives = 256/573 (44%), Gaps = 72/573 (12%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIV 69
           G +  A   +  MKE  + ++  TYN L+Y L  +        D +  E  + + T+ IV
Sbjct: 161 GGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGY------DREAMEVYKVMATDGIV 214

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
                                     PSV + + +M  + K    E    L   M  +G+
Sbjct: 215 --------------------------PSVRTYSVLMLAFGKRD-VETVVWLLREMEDHGV 247

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P+ +SY I I  L  AG  EEA +    M   G +PD +T ++L +      ++S A  
Sbjct: 248 KPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKD 307

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           V  K+      PD VTY  L+      G+    +++   M + G+  NV+AY+ ++ ++C
Sbjct: 308 VFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALC 367

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC--------- 300
           + GR+DEA  +  +M+  G++P   +Y+ LI G  K D+++ A++L+N M          
Sbjct: 368 QVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGY 427

Query: 301 --------------------------SKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
                                     SK I P+  A  A+L  L +   +  A+  F  L
Sbjct: 428 TYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHEL 487

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                  D + Y +MI    K  N  EA++++ ++IE R  P ++  NSLI    K G+ 
Sbjct: 488 KSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRG 547

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +A ++   +K   L+P+  TY T +     EG ++ ++ LL+EM + +  P  +TY  V
Sbjct: 548 NEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTV 607

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           +  LCK  ++  A+ +L +M + G  PD  +YNT +    K   L +AF++  QM    L
Sbjct: 608 LDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK-KVL 666

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            P   T   ++     NG +  A   L +L+E+
Sbjct: 667 APDYTTLCTILPSFVKNGLMNEA---LHTLKEY 696



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 165/698 (23%), Positives = 305/698 (43%), Gaps = 67/698 (9%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETP 60
           V  + G   +A  ++ KM++   K  + T   L+  L    R +D   D++  +K S+  
Sbjct: 260 VLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAK-DVFWKMKASDQK 318

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            +  T   ++D        +  I          +  +VV+  A++   C++G  + A  +
Sbjct: 319 PDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDV 378

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL------ 174
           F  M + G+ P  +SYN LI G   A  +  ALE  N M  HG  P+  TY +       
Sbjct: 379 FDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGK 438

Query: 175 -------AKGFHLL----------------------SQISGAWKVIQKLLIKGSDPDIVT 205
                   K + L+                       ++  A +V  +L   G  PD +T
Sbjct: 439 SGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNIT 498

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           YT++I    +  N +E +K+   M+      +V+A + L+ ++ K+GR +EA  + +E++
Sbjct: 499 YTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELK 558

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
            + L P   TY+ L+ GL ++ KV + + L  EM S    PN   +  +L  LC+   + 
Sbjct: 559 EMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVN 618

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
            A     ++ M  C+ D+  YN  + G VK   + EA +++ Q+ +K ++P   T  +++
Sbjct: 619 YALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM-KKVLAPDYTTLCTIL 677

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSA----VTYTTFMNAYCEEGNIQRLLALLQEMET 441
             F KNG + +A   L T+K + L+P +     ++ + M    +   +++ +   + +  
Sbjct: 678 PSFVKNGLMNEA---LHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIAL 734

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
             I       + +I+ LCK  K  EA +L++    +GV+    +YN +I        +  
Sbjct: 735 SRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDV 794

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH--NISLTKVAYTTI 559
           A  L ++M     +P   TYN+++D +     ++  D L V  + H      T V Y TI
Sbjct: 795 AEGLFSEMKRLGCDPDEFTYNLILDAM--GKSMRIEDMLKVQKEMHCKGYESTYVTYNTI 852

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGF 604
           I        +++AM  + +++ +GF  +   Y                +  F  ML  G 
Sbjct: 853 ISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGC 912

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            P++ I  ++L  +   G+   V EL   M+  G+ PD
Sbjct: 913 KPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPD 950



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 141/552 (25%), Positives = 248/552 (44%), Gaps = 38/552 (6%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVY 64
            + G  ++A  +  ++KE++L  +  TYN+LL  L R   +  +  L +++  +  P N+ 
Sbjct: 543  KAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLI 602

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T + V+D LC+   +  A+  L     K   P + S N  +    K      A  +FC M
Sbjct: 603  TYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM 662

Query: 125  LK-------------------------------YGLHP----DAFSYNILIHGLCIAGSM 149
             K                               Y L P    D  S++ L+ G+     M
Sbjct: 663  KKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGM 722

Query: 150  EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
            E+++EF  ++    +  D    S L +      +   A ++++K    G      +Y  L
Sbjct: 723  EKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNAL 782

Query: 210  ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
            ICG      ++    L   M   G   +   Y+++L +M KS RI++ L +  EM   G 
Sbjct: 783  ICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGY 842

Query: 270  KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            +   VTY+ +I GL K   +++A+ LY ++ S+  SP    +G +L GL +   I +A  
Sbjct: 843  ESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAED 902

Query: 330  YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             FD ++   C  +  +YNI+++GY   GN  +  +L++ ++++ I+P I ++  LI   C
Sbjct: 903  LFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALC 962

Query: 390  KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
              G++ D+      +   GLEP  +TY   ++     G ++  ++L  +ME   I P   
Sbjct: 963  TAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLY 1022

Query: 450  TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            TY  +I  L K+ K  EA ++ E++   G  P+  TYN +I  +        AF    QM
Sbjct: 1023 TYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQM 1082

Query: 510  WLHNLEPTSATY 521
             +    P S+TY
Sbjct: 1083 IVGGCPPNSSTY 1094



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 227/508 (44%), Gaps = 71/508 (13%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +M + G+  ++++YN LI+ L  +G   EA+E    M   G+ P   TYS+L   F    
Sbjct: 172 MMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRD 231

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
             +  W +++++   G  P++ +YT+ I    Q G  EE  K+ + M  +G K +V+  +
Sbjct: 232 VETVVW-LLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNT 290

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           VL+  +C +GR+ +A  + ++M+A   KPD VTY  L+            I+++N M   
Sbjct: 291 VLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAM--- 347

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
                                  +A  Y D         +VV Y  ++D   ++G + EA
Sbjct: 348 -----------------------KADGYND---------NVVAYTAVVDALCQVGRVDEA 375

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             ++ Q+ +K I P   ++NSLI GF K  ++  A  L + + +HG  P+  TY  F+N 
Sbjct: 376 SDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINY 435

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           Y + G   + +   + M++K I P  V    V+  L K  +L  A ++  ++  IGV PD
Sbjct: 436 YGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPD 495

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQM----------------------------W--LH 512
            ITY  +I+   K  +  +A ++ ++M                            W   H
Sbjct: 496 NITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFH 555

Query: 513 -----NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
                NL+PT  TYN L+ GL   G +K    LL  +  ++     + Y T++   C  G
Sbjct: 556 ELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNG 615

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSF 595
           +V+ A+     M  KG    +  Y  + 
Sbjct: 616 EVNYALGMLYNMTMKGCMPDLSSYNTAL 643



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 172/353 (48%), Gaps = 35/353 (9%)

Query: 67   SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
            S +I  LC+  +  +A   +++           S NA++         +VA+GLF  M +
Sbjct: 745  SPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKR 804

Query: 127  YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG--------- 177
             G  PD F+YN+++  +  +  +E+ L+   +M   G E   +TY+ +  G         
Sbjct: 805  LGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYE 864

Query: 178  -----FHLLSQ---------------------ISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
                 + L+S+                     I  A  +  ++L  G  P+   Y +L+ 
Sbjct: 865  AMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLN 924

Query: 212  GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
            GY   GN E+  +L + M+ QG   ++ +Y+VL+ ++C +GR++++L    ++  +GL+P
Sbjct: 925  GYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEP 984

Query: 272  DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
            DL+TY++LI GL +  ++ +A+ L+N+M    I+PN + + +++L L ++    EA   +
Sbjct: 985  DLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMY 1044

Query: 332  DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            + L+ +    +V  YN +I GY   G+   A   Y Q+I     P+  T+  L
Sbjct: 1045 EELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/411 (22%), Positives = 162/411 (39%), Gaps = 77/411 (18%)

Query: 244 LLSSMCKSGRIDE-------------------------ALGL----------LYEMEAVG 268
           +L  M   GR+ +                         +LG+          L  M+  G
Sbjct: 118 MLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAG 177

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA- 327
           +  +  TY+ LI  L K     +A+++Y  M +  I P+   +  ++L   ++++ T   
Sbjct: 178 IVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRDVETVVW 237

Query: 328 --RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
             R   D  +  N    V  Y I I    + G   EA ++ +++ ++   P +VT   LI
Sbjct: 238 LLREMEDHGVKPN----VYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLI 293

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
              C  G+V+DA+ +   +K    +P  VTY T ++   + G+ + ++ +   M+     
Sbjct: 294 QILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYN 353

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
              V YT V+  LC+  ++ EA  + + M   G+ P Q +YN++I  F K   L  A +L
Sbjct: 354 DNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALEL 413

Query: 506 LNQMWLHNLEPTSATYNILID-----------------------------------GLCV 530
            N M +H   P   TY + I+                                    L  
Sbjct: 414 FNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAK 473

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           +G L  A  +   L+   +    + YT +IK      +  +AM  F +M+E
Sbjct: 474 SGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIE 524



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/313 (20%), Positives = 125/313 (39%), Gaps = 16/313 (5%)

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N M++     G + +  Q++  +  + +  ++ TF ++       G +  A   L  +K 
Sbjct: 116 NYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKE 175

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+  ++ TY   +    + G  +  + + + M T  I P+  TY+V++    K+  ++ 
Sbjct: 176 AGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKR-DVET 234

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
            V LL +M   GV P+  +Y   IR   +     +A+++L +M     +P   T  +LI 
Sbjct: 235 VVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQ 294

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
            LC  G + +A  +   ++  +    +V Y T++      GD    +  +  M   G+  
Sbjct: 295 ILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYND 354

Query: 587 SIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           ++  YT                  F  M   G  P Q     ++  F +   L    EL 
Sbjct: 355 NVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELF 414

Query: 632 AVMIKSGLLPDKF 644
             M   G  P+ +
Sbjct: 415 NHMNIHGPTPNGY 427



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 2/220 (0%)

Query: 361 EAVQLYRQLIEK-RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           EA+QL++ + ++ RI  +  + N ++     +G+V D  ++ D ++   ++ +  T+ T 
Sbjct: 94  EALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTI 153

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
             +   EG ++     L  M+   I     TY  +I  L K    +EA+++ + M   G+
Sbjct: 154 FRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGI 213

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P   TY+ ++ +F K +D+     LL +M  H ++P   +Y I I  L   G  + A  
Sbjct: 214 VPSVRTYSVLMLAFGK-RDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYK 272

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           +L  +++       V  T +I+  C  G V  A   F +M
Sbjct: 273 ILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKM 312


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/545 (26%), Positives = 263/545 (48%), Gaps = 58/545 (10%)

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           +M  Y + G    A  +  +M K G+ PD    N  IH L +   +++A+ F   M    
Sbjct: 238 VMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVE 297

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           +EP+ ITY+ L KG+  L ++  A ++I ++  KG  PD ++Y  ++   C+   ++E  
Sbjct: 298 IEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVR 357

Query: 224 KLREVML------------------------------------SQGFKLNVIAYSVLLSS 247
            L E ML                                     + F+++ + YS ++ S
Sbjct: 358 LLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHS 417

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            C+ GR+D+A  ++ EM + G  PD+VTY+ +I GLC++ KV +A ++  +M      PN
Sbjct: 418 FCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPN 477

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           + ++ A+L GLC+     EAR   +       I + + Y++++ G+ + G   EA  L R
Sbjct: 478 TVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVR 537

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++I+K   P+ V  N LI   C+  KV +A+R ++    +G   + V +TT ++ +C++ 
Sbjct: 538 EMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKD 597

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           +++  L+LL +M      P  VTYT +I  L K+ +++EA +L   M  +G+ P  +TY 
Sbjct: 598 DLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYR 657

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           T+I  +C+   +    +LL +M   + +     YN +I+ LC  G+L+ A  LL  +   
Sbjct: 658 TVIHQYCRMGRVEDLLKLLEKML--SRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRT 715

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
              +       +I+++ ++G                  I +  Y  +  C M +    PD
Sbjct: 716 ASKIDANTCHMLIESYLSKG------------------IPLMSYNVA--CRMFNRNLIPD 755

Query: 608 QEICE 612
            ++CE
Sbjct: 756 LKLCE 760



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 252/530 (47%), Gaps = 22/530 (4%)

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL---SQISG 186
            P+AF Y ++ +    AG +  A+     M + G+EPD    SI     H+L   +++  
Sbjct: 231 RPEAFGYVMVSYSR--AGKLRNAMRVLTMMQKAGIEPD---LSICNTAIHVLVMGNRLDK 285

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A + ++++ I   +P+++TY  LI GYC +  +E+ ++L   M  +G   + I+Y  ++ 
Sbjct: 286 AVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMG 345

Query: 247 SMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
            +CK  RI E   L+ +M +   L PD VTY+  +  L K     +A++   E   +R  
Sbjct: 346 FLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFR 405

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
            +   + AI+   C +  + +A+   + +    CI DVV Y  +I+G  +   + +A ++
Sbjct: 406 VDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKM 465

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
            RQ+ +    P+ V++ +L+ G CKNG   +AR +++  +     P+A+TY+  M+ +  
Sbjct: 466 LRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRR 525

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           EG       L++EM  K   PT V   ++I+ LC++ K+ EA + +E     G   + + 
Sbjct: 526 EGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVN 585

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           + T+I  FC+  DL  A  LL+ M+L N  P   TY  +ID L   G ++ A  L + + 
Sbjct: 586 FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKML 645

Query: 546 EHNISLTKVAYTTIIKAHCAEGDV-------------HKAMTFFCQMVEKGFEISIRDYT 592
              +  T V Y T+I  +C  G V              +  T + Q++EK       +  
Sbjct: 646 RVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQA 705

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                 +L      D   C +++ ++   G     + +A  M    L+PD
Sbjct: 706 YKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPD 755



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 261/546 (47%), Gaps = 6/546 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           YSR G + +A+ V+  M++  ++  +   N+ ++ L      D      + +++ E   N
Sbjct: 242 YSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPN 301

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +I G C   RL+DA+  + E   K   P  +S   +M   CK    +  + L  
Sbjct: 302 VITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLME 361

Query: 123 LMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            MLK   L PD  +YN  +H L   G  +EALEF  +        D + YS +   F   
Sbjct: 362 KMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCRE 421

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A +++ ++  KG  PD+VTYT +I G CQ   V++  K+   M   G K N ++Y
Sbjct: 422 GRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSY 481

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL+ +CK+G   EA  ++   E     P+ +TYS+L+ G  ++ K  +A  L  EM  
Sbjct: 482 TALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIK 541

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   P       ++  LC++E + EA+ + +  + + C  +VV +  +I G+ +  ++  
Sbjct: 542 KGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEA 601

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ L   +      P +VT+ ++I    K G++ +A +L   +   GL P+ VTY T ++
Sbjct: 602 ALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIH 661

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC  G ++ LL LL++M ++        Y  VI+ LC    L++A +LL  +       
Sbjct: 662 QYCRMGRVEDLLKLLEKMLSRQ--ECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKI 719

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D  T + +I S+        ++ +  +M+  NL P       +   L + G  + AD L+
Sbjct: 720 DANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLI 779

Query: 542 VSLQEH 547
           +   E 
Sbjct: 780 LRFVER 785


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 157/606 (25%), Positives = 277/606 (45%), Gaps = 41/606 (6%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I GL + S   +A+ FL         P+VV+   ++S + K       K +  +M+  G
Sbjct: 113 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 172

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG-- 186
            +P+   +N L+H  C       A +  N M   G  P  + Y+I         ++    
Sbjct: 173 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 232

Query: 187 ----AWKVIQKLLIKG---SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               A K+  ++L      +  ++  +   +CG   +G  ++  +L + M+ +GF  +  
Sbjct: 233 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCG---VGKFDKAFQLIKEMMRKGFVPDTS 289

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            YS +++ +C + ++++A  L  EM+ VG+ PD+ TY+ILI   CK   + +A  L+ EM
Sbjct: 290 TYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM 349

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            S   SP    + A++    + + + +A   F  ++ + C  + V Y  ++DG  K GNI
Sbjct: 350 RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNI 409

Query: 360 GEAVQLYRQLI--------------EKR--ISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
            +A ++Y +LI              E R  ++P++VT+ +L+ G CK  KV  A  LLD 
Sbjct: 410 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDA 469

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +   G EP+ + Y   ++ +C+ G I     +  +M      P+  TYT +I  + K  +
Sbjct: 470 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGR 529

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           L  A+++L  M     TP+ +TY  +I   C+  +  KA +LL+ M      P   TY  
Sbjct: 530 LDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 589

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE-- 581
           LIDGL   G +  +  L   +     S   V Y  +I   CA G + KA     +M +  
Sbjct: 590 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY 649

Query: 582 -----KGFEISIRDYTKSFFCM------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
                +G+  +I+ ++KSF         M S G  P   +  +++  F + G L    EL
Sbjct: 650 WPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMEL 709

Query: 631 AAVMIK 636
              M++
Sbjct: 710 HKEMME 715



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 144/583 (24%), Positives = 236/583 (40%), Gaps = 91/583 (15%)

Query: 92  KEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC----- 144
           K+FG  PS V+ NA++      G  ++   +   M + G   D F+     H LC     
Sbjct: 32  KDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRW 91

Query: 145 ----------------------IAGSME-----EALEFTNDMGRHGVEPDAITYSILAKG 177
                                 I+G ME     EA+ F + M  +   P+ +TY  L  G
Sbjct: 92  ADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    Q+    ++I  ++ +G +P+   +  L+  YC   +     KL   M + G    
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 238 VIAYSVLLSSMCKS-----------------------------------------GRIDE 256
            + Y++ + S+C                                           G+ D+
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A  L+ EM   G  PD  TYS +I  LC   KV KA  L+ EM    ++P+ + +  ++ 
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
             C+  +I +A+  F+ +    C   VV Y  +I  Y+K   + +A  ++ ++++    P
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 391

Query: 377 SIVTFNSLIYGFCKNGKV----------------ADARRLLDTIKLHGLEPSAVTYTTFM 420
           + VT+ +L+ G CK G +                AD+         H L P+ VTY   +
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALV 451

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C+   +     LL  M +    P H+ Y  +I G CK  K+  A ++   M   G  
Sbjct: 452 DGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYL 511

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P   TY ++I    K   L  A ++L+QM   +  P   TY  +IDGLC  G+ + A  L
Sbjct: 512 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 571

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L  ++E   S   V YT +I      G +  ++  F QM  KG
Sbjct: 572 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/530 (26%), Positives = 228/530 (43%), Gaps = 53/530 (10%)

Query: 28  KVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           KV++  +   L  +   D  + L  ++       +  T S VI  LC  ++++ A L  Q
Sbjct: 253 KVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ 312

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           E       P V +   ++  +CK G  E A+ LF  M   G  P   +Y  LIH    A 
Sbjct: 313 EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK 372

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD------- 200
            + +A +  + M   G  P+ +TY  L  G      IS A++V  KL I  SD       
Sbjct: 373 QVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL-IGTSDSADSDFY 431

Query: 201 ----------PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
                     P++VTY  L+ G C+   V+   +L + MLS G + N I Y  L+   CK
Sbjct: 432 FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCK 491

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           +G+ID A  +  +M   G  P + TY+ LI  + K  ++  A+++ ++M     +PN   
Sbjct: 492 AGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 551

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + A++ GLC      +A      +    C  +VV Y  +IDG  K G I  ++ L+ Q+ 
Sbjct: 552 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 611

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL------------------------ 406
            K  SP+ VT+  LI   C  G +  AR LL  +K                         
Sbjct: 612 RKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS 671

Query: 407 ---------HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME--TKAIGPTHVTYTVVI 455
                    +G  P A  Y   ++ + + G ++  + L +EM     ++   +  Y  +I
Sbjct: 672 LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLI 731

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           + LC   +++EA +L  +M   G  P+   +  +I+   + K   +A QL
Sbjct: 732 QALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/515 (25%), Positives = 228/515 (44%), Gaps = 54/515 (10%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTN 66
           G    A  +I +M          TY+ ++  L H    +  + L+ ++K+     +VYT 
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+ID  C+   ++ A    +E       P+VV+  A++  Y K      A  +F  M+ 
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEF------TNDMG----------RHGVEPDAIT 170
            G  P+  +Y  L+ GLC AG++ +A E       T+D            RH + P+ +T
Sbjct: 387 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 446

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y  L  G     ++  A +++  +L  G +P+ + Y  LI G+C+ G ++   ++   M 
Sbjct: 447 YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 506

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
             G+  +V  Y+ L+  M K GR+D A+ +L +M      P++VTY+ +I GLC+  +  
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           KA++L + M  K  SPN   + A++ GL +   I  +   F  +    C  + V Y ++I
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN--------------GKV-- 394
           +     G + +A  L  ++ +      +  +   I GF K+              G V  
Sbjct: 627 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPI 686

Query: 395 -----------ADARRLLDTIKLHG--LE-PSAVT-----YTTFMNAYCEEGNIQRLLAL 435
                      + A RL   ++LH   +E PS+V      Y + + A C    ++    L
Sbjct: 687 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 746

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
             EM  +   P    +  +IKGL +  K  EA+QL
Sbjct: 747 YSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 200/443 (45%), Gaps = 27/443 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           + + G++  A ++  +M+ +    ++ TY +L++     +      D++  +  +    N
Sbjct: 333 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392

Query: 63  VYTNSIVIDGLCQQSRLQDA------ILFLQETAGKEF----------GPSVVSLNAIMS 106
             T   ++DGLC+   +  A      ++   ++A  +F           P+VV+  A++ 
Sbjct: 393 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 452

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
             CK    + A  L   ML  G  P+   Y+ LI G C AG ++ A E    M + G  P
Sbjct: 453 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 512

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
              TY+ L        ++  A KV+ ++L     P++VTYT +I G C+IG  E+ LKL 
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 572

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
            +M  +G   NV+ Y+ L+  + K+G+ID +L L  +M   G  P+ VTY +LI  LC  
Sbjct: 573 SLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAA 632

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
             + KA  L  EM           +   + G   K  I    +  + +     +    +Y
Sbjct: 633 GLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF-SKSFIASLGI-LEEMESYGTVPIAPVY 690

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN----SLIYGFCKNGKVADARRLLD 402
            ++ID + K G +  A++L+++++E  +  S+ T N    SLI   C   +V +A RL  
Sbjct: 691 GMLIDCFSKAGRLEIAMELHKEMME--VPSSVKTDNDMYASLIQALCLASQVEEAFRLYS 748

Query: 403 TIKLHGLEPSAVTYTTFMNAYCE 425
            +   G  P    +   +    E
Sbjct: 749 EMTRRGFVPELSVFVCLIKGLVE 771



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 143/301 (47%), Gaps = 9/301 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           + + G +  A  V  +M +     S+ TY SL+  +    R    M  L   +K S TP 
Sbjct: 489 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP- 547

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + +IDGLC+    + A+  L     K   P+VV+  A++    K G  +++  LF
Sbjct: 548 NVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLF 607

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G  P+  +Y +LI+ LC AG +++A     +M +         Y    +GF   
Sbjct: 608 TQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFS-- 665

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS--QGFKLNVI 239
                +  +++++   G+ P    Y +LI  + + G +E  ++L + M+      K +  
Sbjct: 666 KSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDND 725

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L+ ++C + +++EA  L  EM   G  P+L  +  LI+GL +  K  +A+QL   +
Sbjct: 726 MYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGI 785

Query: 300 C 300
           C
Sbjct: 786 C 786



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 107/303 (35%), Gaps = 83/303 (27%)

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT------------- 418
           +R + ++ T  + +   C +    D+    D +K  G  PS VTY               
Sbjct: 3   RRRAAAVATLRASLRRTCSHA-AGDSE---DPLKDFGYRPSKVTYNALVQVLSSAGQVDL 58

Query: 419 ----------------------FMNAYCEEGN-------IQR------------------ 431
                                 F +A C+EG        I+R                  
Sbjct: 59  GFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLM 118

Query: 432 -------LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
                   ++ L  M   +  P  VTY  ++ G  K+ +L    +++  M   G  P+  
Sbjct: 119 EASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPS 178

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            +N+++ S+C  KD   A++LLN+M      P    YNI I  +C    L + D  L+ L
Sbjct: 179 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD--LLDL 236

Query: 545 QEH--------NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--S 594
            E         N  L KV      +  C  G   KA     +M+ KGF      Y+K  +
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296

Query: 595 FFC 597
           F C
Sbjct: 297 FLC 299


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 194/357 (54%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I   C++  L++A   +   A K   PS+ + NAI++  CK G    AKG+   M
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L  GL PD  +YN L+   C   +  EA E   +M R GV PD +++S L   F     +
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A    + +   G  PD V YTVL+ GYC+ GN+ E LK+R+ ML QG  L+VIAY+ +
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L+ +CK   + +A  L  EM   G  PD  T++ LI G C+   + KA+ L+  M  + I
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+  A+  ++ G C+   + +A   +D +I      + + Y I+I+ Y  +G++ EA +
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 302

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           L+  +IEK I P++VT N++I G+C++G  + A   L  +   G+ P  ++Y T +N
Sbjct: 303 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 116/356 (32%), Positives = 193/356 (54%)

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +YN LI   C  G +EEA E  N M   G++P   TY+ +  G     + + A  ++ ++
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           L  G  PD  TY  L+   C+  N  E  ++   ML QG   +++++S L++   ++  +
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D+AL    +M+  GL PD V Y++L+ G C+   + +A+++ +EM  +    +  A+  I
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           L GLC+++M+T+A   FD ++    + D   +  +I G+ + GN+ +A+ L+  + ++ I
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P IV +N+LI GFCK G++  A  L D +    + P+ +TY   +NAYC  G++     
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 302

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           L   M  K I PT VT   VIKG C+     +A + L  M   GV PD I+YNT+I
Sbjct: 303 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 197/358 (55%)

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           +VTY  LI  YC+ G +EE  ++   M  +G K ++  Y+ +++ +CK GR   A G+L 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           EM  +GL PD  TY+ L+   C++D   +A +++ EM  + + P+  +  +++       
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            + +A +YF  +     + D V+Y +++ GY + GN+ EA+++  +++E+     ++ +N
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           +++ G CK   + DA +L D +   G  P   T+TT ++ +C++GN+ + L+L   M  +
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            I P  V Y  +I G CK  ++++A +L + M    + P+ ITY  +I ++C    + +A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           F+L + M    ++PT  T N +I G C +GD   AD  L  +    ++   ++Y T+I
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 180/346 (52%)

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           ++ Y+ L+ + C+ G ++EA  ++  M   GLKP L TY+ +I GLCK+ +  +A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM +  +SP++  +  +L+  C ++  +EA+  F  ++    + D+V ++ ++  + +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           ++ +A+  +R + +  + P  V +  L++G+C+NG + +A ++ D +   G     + Y 
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T +N  C+E  +     L  EM  +   P   T+T +I G C+   + +A+ L   M   
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
            + PD + YNT+I  FCK  ++ KA +L + M    + P   TY ILI+  C  G +  A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             L   + E  I  T V   T+IK +C  GD  KA  F  +M+ KG
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 346



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 173/375 (46%), Gaps = 20/375 (5%)

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY+ LI   C++  + +A ++ N M  K + P+ F + AI+ GLC+K     A+    
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            ++      D   YN ++    +  N  EA +++ +++ + + P +V+F+SL+  F +N 
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
            +  A      +K  GL P  V YT  M+ YC  GN+   L +  EM  +      + Y 
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            ++ GLCK+  L +A +L ++M   G  PD  T+ T+I   C+  ++ KA  L   M   
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
           N++P    YN LIDG C  G+++ A  L   +    I    + Y  +I A+C+ G V +A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 573 MTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
              +  M+EKG +                    P    C  ++  + + GD     E   
Sbjct: 301 FRLWDVMIEKGIK--------------------PTLVTCNTVIKGYCRSGDSSKADEFLG 340

Query: 633 VMIKSGLLPDKFLIN 647
            MI  G+ PD    N
Sbjct: 341 RMIAKGVAPDHISYN 355



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 175/351 (49%), Gaps = 5/351 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETP 60
            Y R G++ +A  ++  M +  LK S+ TYN+++  L    R+      L + + +  +P
Sbjct: 10  AYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSP 69

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
                N+++++  C++    +A     E   +   P +VS +++M+ + +    + A   
Sbjct: 70  DTTTYNTLLVES-CRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVY 128

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M K+GL PD   Y +L+HG C  G+M EAL+  ++M   G   D I Y+ +  G   
Sbjct: 129 FRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCK 188

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              ++ A K+  +++ +G+ PD  T+T LI G+CQ GN+ + L L   M  +  K +++A
Sbjct: 189 EKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVA 248

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+   CK G +++A  L   M +  + P+ +TY ILI   C    V +A +L++ M 
Sbjct: 249 YNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMI 308

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
            K I P       ++ G C     ++A  +   +I      D + YN +I+
Sbjct: 309 EKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 3/248 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSE 58
           L  V+SR   +  A+     MK+  L      Y  L++       M +   + D++    
Sbjct: 112 LMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 171

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +V   + +++GLC++  L DA     E   +   P   +   ++  +C+ G    A 
Sbjct: 172 CVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 231

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            LF  M +  + PD  +YN LI G C  G ME+A E  + M    + P+ ITY IL   +
Sbjct: 232 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 291

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             +  +S A+++   ++ KG  P +VT   +I GYC+ G+  +  +    M+++G   + 
Sbjct: 292 CSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDH 351

Query: 239 IAYSVLLS 246
           I+Y+ L++
Sbjct: 352 ISYNTLIN 359


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 169/670 (25%), Positives = 296/670 (44%), Gaps = 41/670 (6%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
           V S  G V     V  +M E    +   T     + L       D  D I+  +   +  
Sbjct: 49  VLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTV 108

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             + +I GL + S   +A+ FL         P+VV+   ++S + K       K +  +M
Sbjct: 109 LCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMM 168

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G +P+   +N L+H  C       A +  N M   G  P  + Y+I         ++
Sbjct: 169 MTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKL 228

Query: 185 SG------AWKVIQKLLIKG---SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                   A K+  ++L      +  ++  +   +CG   +G  ++  +L + M+ +GF 
Sbjct: 229 PSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCG---VGKFDKAFQLIKEMMRKGFV 285

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +   YS +++ +C + ++++A  L  EM+ VG+ PD+ TY+ILI   CK   + +A  L
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           + EM S   SP    + A++    + + + +A   F  ++ + C  + V Y  ++DG  K
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405

Query: 356 LGNIGEAVQLYRQLI--------------EKR--ISPSIVTFNSLIYGFCKNGKVADARR 399
            GNI +A ++Y +LI              E R  ++P++VT+ +L+ G CK  KV  A  
Sbjct: 406 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           LLD +   G EP+ + Y   ++ +C+ G I     +  +M      P+  TYT +I  + 
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           K  +L  A+++L  M     TP+ +TY  +I   C+  +  KA +LL+ M      P   
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 585

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TY  LIDGL   G +  +  L   +     S   V Y  +I   CA G + KA     +M
Sbjct: 586 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645

Query: 580 VE-------KGFEISIRDYTKSFFCM------MLSNGFPPDQEICEVMLIAFHQGGDLGS 626
            +       +G+  +I+ ++KSF         M S G  P   +  +++  F + G L  
Sbjct: 646 KQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEI 705

Query: 627 VFELAAVMIK 636
             EL   M++
Sbjct: 706 AMELHKEMME 715



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 144/583 (24%), Positives = 236/583 (40%), Gaps = 91/583 (15%)

Query: 92  KEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC----- 144
           K+FG  PS V+ NA++      G  ++   +   M + G   D F+     H LC     
Sbjct: 32  KDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRW 91

Query: 145 ----------------------IAGSME-----EALEFTNDMGRHGVEPDAITYSILAKG 177
                                 I+G ME     EA+ F + M  +   P+ +TY  L  G
Sbjct: 92  ADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    Q+    ++I  ++ +G +P+   +  L+  YC   +     KL   M + G    
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 238 VIAYSVLLSSMCKS-----------------------------------------GRIDE 256
            + Y++ + S+C                                           G+ D+
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A  L+ EM   G  PD  TYS +I  LC   KV KA  L+ EM    ++P+ + +  ++ 
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
             C+  +I +A+  F+ +    C   VV Y  +I  Y+K   + +A  ++ ++++    P
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 391

Query: 377 SIVTFNSLIYGFCKNGKV----------------ADARRLLDTIKLHGLEPSAVTYTTFM 420
           + VT+ +L+ G CK G +                AD+         H L P+ VTY   +
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALV 451

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C+   +     LL  M +    P H+ Y  +I G CK  K+  A ++   M   G  
Sbjct: 452 DGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYL 511

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P   TY ++I    K   L  A ++L+QM   +  P   TY  +IDGLC  G+ + A  L
Sbjct: 512 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 571

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L  ++E   S   V YT +I      G +  ++  F QM  KG
Sbjct: 572 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 138/530 (26%), Positives = 228/530 (43%), Gaps = 53/530 (10%)

Query: 28  KVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           KV++  +   L  +   D  + L  ++       +  T S VI  LC  ++++ A L  Q
Sbjct: 253 KVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ 312

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           E       P V +   ++  +CK G  E A+ LF  M   G  P   +Y  LIH    A 
Sbjct: 313 EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK 372

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD------- 200
            + +A +  + M   G  P+ +TY  L  G      IS A++V  KL I  SD       
Sbjct: 373 QVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL-IGTSDSADSDFY 431

Query: 201 ----------PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
                     P++VTY  L+ G C+   V+   +L + MLS G + N I Y  L+   CK
Sbjct: 432 FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCK 491

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           +G+ID A  +  +M   G  P + TY+ LI  + K  ++  A+++ ++M     +PN   
Sbjct: 492 AGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 551

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + A++ GLC      +A      +    C  +VV Y  +IDG  K G I  ++ L+ Q+ 
Sbjct: 552 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 611

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL------------------------ 406
            K  SP+ VT+  LI   C  G +  AR LL  +K                         
Sbjct: 612 RKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS 671

Query: 407 ---------HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME--TKAIGPTHVTYTVVI 455
                    +G  P A  Y   ++ + + G ++  + L +EM     ++   +  Y  +I
Sbjct: 672 LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLI 731

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           + LC   +++EA +L  +M   G  P+   +  +I+   + K   +A QL
Sbjct: 732 QALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/515 (25%), Positives = 228/515 (44%), Gaps = 54/515 (10%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTN 66
           G    A  +I +M          TY+ ++  L H    +  + L+ ++K+     +VYT 
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+ID  C+   ++ A    +E       P+VV+  A++  Y K      A  +F  M+ 
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEF------TNDMG----------RHGVEPDAIT 170
            G  P+  +Y  L+ GLC AG++ +A E       T+D            RH + P+ +T
Sbjct: 387 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 446

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y  L  G     ++  A +++  +L  G +P+ + Y  LI G+C+ G ++   ++   M 
Sbjct: 447 YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 506

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
             G+  +V  Y+ L+  M K GR+D A+ +L +M      P++VTY+ +I GLC+  +  
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           KA++L + M  K  SPN   + A++ GL +   I  +   F  +    C  + V Y ++I
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN--------------GKV-- 394
           +     G + +A  L  ++ +      +  +   I GF K+              G V  
Sbjct: 627 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPI 686

Query: 395 -----------ADARRLLDTIKLHG--LE-PSAVT-----YTTFMNAYCEEGNIQRLLAL 435
                      + A RL   ++LH   +E PS+V      Y + + A C    ++    L
Sbjct: 687 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 746

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
             EM  +   P    +  +IKGL +  K  EA+QL
Sbjct: 747 YSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 200/443 (45%), Gaps = 27/443 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           + + G++  A ++  +M+ +    ++ TY +L++     +      D++  +  +    N
Sbjct: 333 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392

Query: 63  VYTNSIVIDGLCQQSRLQDA------ILFLQETAGKEF----------GPSVVSLNAIMS 106
             T   ++DGLC+   +  A      ++   ++A  +F           P+VV+  A++ 
Sbjct: 393 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 452

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
             CK    + A  L   ML  G  P+   Y+ LI G C AG ++ A E    M + G  P
Sbjct: 453 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 512

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
              TY+ L        ++  A KV+ ++L     P++VTYT +I G C+IG  E+ LKL 
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 572

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
            +M  +G   NV+ Y+ L+  + K+G+ID +L L  +M   G  P+ VTY +LI  LC  
Sbjct: 573 SLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAA 632

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
             + KA  L  EM           +   + G   K  I    +  + +     +    +Y
Sbjct: 633 GLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF-SKSFIASLGI-LEEMESYGTVPIAPVY 690

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN----SLIYGFCKNGKVADARRLLD 402
            ++ID + K G +  A++L+++++E  +  S+ T N    SLI   C   +V +A RL  
Sbjct: 691 GMLIDCFSKAGRLEIAMELHKEMME--VPSSVKTDNDMYASLIQALCLASQVEEAFRLYS 748

Query: 403 TIKLHGLEPSAVTYTTFMNAYCE 425
            +   G  P    +   +    E
Sbjct: 749 EMTRRGFVPELSVFVCLIKGLVE 771



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 149/316 (47%), Gaps = 11/316 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           + + G +  A  V  +M +     S+ TY SL+  +    R    M  L   +K S TP 
Sbjct: 489 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP- 547

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + +IDGLC+    + A+  L     K   P+VV+  A++    K G  +++  LF
Sbjct: 548 NVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLF 607

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G  P+  +Y +LI+ LC AG +++A     +M +         Y    +GF   
Sbjct: 608 TQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFS-- 665

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS--QGFKLNVI 239
                +  +++++   G+ P    Y +LI  + + G +E  ++L + M+      K +  
Sbjct: 666 KSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDND 725

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L+ ++C + +++EA  L  EM   G  P+L  +  LI+GL +  K  +A+QL   +
Sbjct: 726 MYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGI 785

Query: 300 CSKRIS--PNSFAHGA 313
           C + ++   N   HG 
Sbjct: 786 CHEGVNWQGNKSFHGG 801



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 107/303 (35%), Gaps = 83/303 (27%)

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT------------- 418
           +R + ++ T  + +   C +    D+    D +K  G  PS VTY               
Sbjct: 3   RRRAAAVATLRASLRRTCSHA-AGDSE---DPLKDFGYRPSKVTYNALVQVLSSAGQVDL 58

Query: 419 ----------------------FMNAYCEEGN-------IQR------------------ 431
                                 F +A C+EG        I+R                  
Sbjct: 59  GFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLM 118

Query: 432 -------LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
                   ++ L  M   +  P  VTY  ++ G  K+ +L    +++  M   G  P+  
Sbjct: 119 EASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPS 178

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            +N+++ S+C  KD   A++LLN+M      P    YNI I  +C    L + D  L+ L
Sbjct: 179 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD--LLDL 236

Query: 545 QEH--------NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--S 594
            E         N  L KV      +  C  G   KA     +M+ KGF      Y+K  +
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296

Query: 595 FFC 597
           F C
Sbjct: 297 FLC 299


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 228/442 (51%), Gaps = 4/442 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           V+  L +   L  A+   +    +   PS+V+ N +++  C  G    A  LF  M +  
Sbjct: 16  VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75

Query: 129 -LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            + PD ++YN LI GLC +G+ E A +  ++M    +  +  TYS + K     ++   +
Sbjct: 76  RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           +KV+++++  G +PD+  +  ++ G+ +  N+E+  ++ + M+  G+K + ++Y +L+  
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHG 195

Query: 248 MCKSGRIDEALGLLYE--MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           + K G++DE+L +L E  M A G  P+++T+S LI GLC+  ++ KA++++  M      
Sbjct: 196 LAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 255

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN + +  ++ GLC  E + +AR  F+ +  +    D V YN +I GY K G++ EA +L
Sbjct: 256 PNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 315

Query: 366 YRQLIEKR-ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           YR++     + P+IVTFN+LI GFCK GK+  A  L+  +   GL     TY   +    
Sbjct: 316 YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLS 375

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
               +   L + ++M  K      V+    + GLCK   + +A  + E     G  P+  
Sbjct: 376 RATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPE 435

Query: 485 TYNTIIRSFCKCKDLRKAFQLL 506
           T+  +  S  K   +  A +L+
Sbjct: 436 TFRILSESLIKLGRVEDAQKLM 457



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 220/451 (48%), Gaps = 4/451 (0%)

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           ++    K G    A  +F  M      P   +YN+LI+  C AG   +AL+    M R  
Sbjct: 16  VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75

Query: 164 -VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
            VEPD  TY+ L  G        GA K++ ++  K    ++ TY+ +I    +    EE 
Sbjct: 76  RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
            K+ E M++ G   +V A++ ++    +S  +++A  +   M   G KPD V+Y ILI G
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHG 195

Query: 283 LCKQDKVHKAIQLYNEMCSKRIS--PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
           L K  K+ +++++ +EM  +     PN      ++ GLC    + +A   F S++ + C 
Sbjct: 196 LAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 255

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            +   Y  +I G  +   + +A +L+ ++ +  I P  V +NSLI G+CK G + +A +L
Sbjct: 256 PNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 315

Query: 401 LDTIKL-HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
              +    GL+P+ VT+ T ++ +C+ G + R   L+ EM TK +     TY ++I GL 
Sbjct: 316 YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLS 375

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           +  KL EA+++ + M       D ++  + +   CK  ++ +A+ +          P   
Sbjct: 376 RATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPE 435

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
           T+ IL + L   G +++A  L+   +  +I+
Sbjct: 436 TFRILSESLIKLGRVEDAQKLMEPAKARDIT 466



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 199/384 (51%), Gaps = 4/384 (1%)

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            Y  ++    + G + + L++ E M S+    +++ Y+VL++S C +G   +AL L   M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 265 EAVG-LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           +    ++PD  TY+ LI GLC       A +L +EM  K I+ N F + +I+  L ++  
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
             E+    + ++ + C  DV  +N ++ G+ +  N+ +A ++Y+ ++E    P  V+++ 
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 384 LIYGFCKNGKVADARRLLDTIKLH--GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           LI+G  K GK+ ++ ++L  + +   G  P+ +T++T ++  C  G +++ L +   M  
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
               P   TYT +I GLC+  K+ +A +L E M    + PD + YN++I  +CK   + +
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 502 AFQLLNQM-WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           A +L  +M     L+PT  T+N LIDG C  G L  A+ L+  +    ++     Y  +I
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGF 584
                   + +A+  + QM EK F
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKF 395



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 202/411 (49%), Gaps = 4/411 (0%)

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
            Y  + +       ++ A +V + +  +   P +VTY VLI   C  G   + L L + M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 230 LSQG-FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
             +   + +   Y+ L+S +C SG  + A  LL EM    +  ++ TYS +I+ L K+ K
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
             ++ ++  EM +   +P+ FA   ++ G      + +AR  +  ++ S    D V Y+I
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRIS--PSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           +I G  K+G + E++++  ++  +     P+++TF++LI+G C+ G++  A  +  ++  
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G +P+  TYTT +   C    + +   L ++M    I P  V Y  +I G CK+  + E
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 467 AVQLLEDMYV-IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           A +L  +M    G+ P  +T+NT+I  FCK   L +A +L+ +M    L   + TY ILI
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            GL     L  A  +   ++E    L  V+  + +   C  G++ +A   F
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVF 422



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 198/409 (48%), Gaps = 8/409 (1%)

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +Y+ ++  L  AG + +ALE    M      P  +TY++L        +   A  + Q +
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 195 -LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
              K  +PD  TY  LI G C  GN E   KL   M  +    NV  YS ++ S+ K  +
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
            +E+  +L EM A G  PD+  ++ +++G  + + + KA ++Y  M      P++ ++  
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 314 ILLGLCEKEMITEARMYFDSLIM--SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
           ++ GL +   + E+      + M  +  + +V+ ++ +I G  + G + +A++++  ++E
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
               P+  T+ +LI G C+  KV  AR L + +    + P AV Y + +  YC+ G++  
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 432 LLALLQEMETKA-IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
              L +EM   A + PT VT+  +I G CK  KL  A +L+ +M   G+  D  TY  +I
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371

Query: 491 RSFCKCKDLRKAFQLLNQMWLHN--LEPTSATYNILIDGLCVNGDLKNA 537
               +   L +A ++  QM      L+P S      + GLC  G++  A
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVS--FVGGLCKTGNIDQA 418



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 224/480 (46%), Gaps = 40/480 (8%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSE-TPRN 62
           ++ GM+  A+ V   MK      S+ TYN L+    N        DL+  +K  +    +
Sbjct: 21  AKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPD 80

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T + +I GLC     + A   L E   K    +V + ++I+    K    E +  +  
Sbjct: 81  RWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLE 140

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+  G +PD F++N ++ G   + +ME+A E    M   G +PD ++Y IL  G   + 
Sbjct: 141 EMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIG 200

Query: 183 QISGAWKVIQKLLIKGSD--PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           ++  + K++ ++ ++ +   P+++T++ LI G C+ G +E+ L++   ML  G K N   
Sbjct: 201 KLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYT 260

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L++ +C++ ++ +A  L  +M    + PD V Y+ LI G CK+  + +A +LY EM 
Sbjct: 261 YTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM- 319

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
                    + GA L                           +V +N +IDG+ KLG +G
Sbjct: 320 ---------SGGAGLQ------------------------PTIVTFNTLIDGFCKLGKLG 346

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A +L  ++  K ++    T+  LI G  +  K+ +A  +   ++        V+  +F+
Sbjct: 347 RANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFV 406

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
              C+ GNI +  A+ +        P   T+ ++ + L K  ++++A +L+E      +T
Sbjct: 407 GGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDIT 466



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 19/315 (6%)

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y+ ++    K G + +A++++  +  +   PS+VT+N LI   C  G+   A  L  ++K
Sbjct: 13  YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72

Query: 406 LHG-LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
               +EP   TY T ++  C  GN +    LL EM  K I     TY+ +IK L K+ K 
Sbjct: 73  REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           +E+ ++LE+M   G  PD   +N +++ F +  ++ KA ++   M     +P + +Y+IL
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192

Query: 525 IDGLCVNGDLKNADCLL--VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           I GL   G L  +  +L  ++++        + ++T+I   C  G++ KA+  F  M+E 
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252

Query: 583 GFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           G + +   YT               +  F  M     PPD      ++  + + G +   
Sbjct: 253 GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEA 312

Query: 628 FELAAVMI-KSGLLP 641
            +L   M   +GL P
Sbjct: 313 EKLYREMSGGAGLQP 327



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 115/266 (43%), Gaps = 19/266 (7%)

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
            ++ ++    K G +A A  + +T+K     PS VTY   +N+ C  G   + L L Q M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 440 ET-KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           +  K + P   TY  +I GLC     + A +LL +M    +  +  TY++II+S  K   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
             +++++L +M      P    +N ++ G   + +++ A  +   + E       V+Y  
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAF 618
           +I      G + +++    +M                   M + G+ P+      ++   
Sbjct: 192 LIHGLAKIGKLDESLKILSEMA------------------MRAAGYVPNVITFSTLIHGL 233

Query: 619 HQGGDLGSVFELAAVMIKSGLLPDKF 644
            + G+L    E+   M+++G  P+K+
Sbjct: 234 CRTGELEKALEVFGSMLEAGCKPNKY 259


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/577 (26%), Positives = 290/577 (50%), Gaps = 33/577 (5%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA--GKEFGPSVVSLNAIMSR 107
           ++D++     P +V++ +I+++GLC ++R Q+A+  L   A  G +  P VVS + +++ 
Sbjct: 39  VFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           + K G  ++ K     ML   + P+  +YN +I  LC A ++++A+E    M + GV PD
Sbjct: 98  FFKEG--DLDK-----MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 150

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            +TY+ +  GF    Q   A   ++K+   G +PD+VTY  L+   C+ G   E  K+ +
Sbjct: 151 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 210

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M  +G K ++  Y  LL      G + E  GLL  M   G+ P+   +SIL+    KQ+
Sbjct: 211 SMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 270

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           KV +A+ ++++M  + ++PN+  +G ++  LC+   + +A +YF+ +I      D ++YN
Sbjct: 271 KVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYN 330

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I          +A +L+ +++++ I  S + FNS+I   CK G+V ++ +L D +   
Sbjct: 331 SLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRI 390

Query: 408 GLEPSAVT-----------YTTFMNAYCEEGNIQRLLALLQEM----------ETKAIGP 446
           G++P  +T           Y+ F+N Y    N+       +E              + GP
Sbjct: 391 GVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGP 450

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              TY +++ GLCK     +A+++ +++ ++ +  +  T+N +I +  K     +A  L 
Sbjct: 451 FLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 510

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
                + L P   TY ++ + +   G L+  D L +S++++  ++       I++     
Sbjct: 511 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 570

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           G++ +A T+   + EK F  S+   T S F  +LS G
Sbjct: 571 GEITRAGTYLSMIDEKHF--SLEASTASLFIDLLSGG 605



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 192/371 (51%), Gaps = 10/371 (2%)

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG--LKPDLVTYS 277
           E+   + + +L +G   +V +Y++LL+ +C   R  EAL LL+ M   G    PD+V+YS
Sbjct: 34  EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            +I G  K+  + K       M  +RISPN   + +I+  LC+ + + +A     +++ S
Sbjct: 93  TVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
             + D + YN ++ G+   G   EA+   +++    + P +VT+NSL+   CKNG+  +A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
           R++ D++   GL+P   TY T +  Y  +G +  +  LL  M    I P H  +++++  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
             KQ K++EA+ +   M   G+ P+ +TY T+I   CK   +  A     QM    L P 
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
           S  YN LI  LC+    + A+ L + + +  I L+ + + +II +HC EG V ++   F 
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFD 385

Query: 578 QMVEKGFEISI 588
            MV  G +  I
Sbjct: 386 LMVRIGVKPDI 396



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 103/495 (20%), Positives = 197/495 (39%), Gaps = 62/495 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL----YNLRHTDIMWDLYDDIKVSETPR 61
           +  +G   +A+  + KM+   ++  + TYNSL+     N R T+    ++D +       
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE-ARKIFDSMTKRGLKP 219

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T   ++ G   +  L +    L         P+    + ++  Y K    E A  +F
Sbjct: 220 DITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVF 279

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + GL+P+A +Y  +I  LC +G +E+A+ +   M   G+ PD+I Y+ L     + 
Sbjct: 280 SKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIF 339

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +    W+  ++L ++                               ML +G  L+ I +
Sbjct: 340 DK----WEKAEELFLE-------------------------------MLDRGICLSTIFF 364

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT-----------YSILIR------GLC 284
           + ++ S CK GR+ E+  L   M  +G+KPD++T           YS+ +        + 
Sbjct: 365 NSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMS 424

Query: 285 KQDKVHKAIQLY----NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
                 K   +     N   +    P    +  IL GLC+ ++  +A   F +L + +  
Sbjct: 425 NTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLK 484

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            +   +NIMID  +K+G   EA  L+       + P+  T+  +       G + +  +L
Sbjct: 485 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 544

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
             +++ +G    +      +    + G I R    L  ++ K       T ++ I  L  
Sbjct: 545 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLS 603

Query: 461 QWKLQEAVQLLEDMY 475
             K QE    L + Y
Sbjct: 604 GGKYQEYHIFLPEKY 618



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/352 (21%), Positives = 146/352 (41%), Gaps = 53/352 (15%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           +L   Y++   V +A+ V +KM++  L  +  TY +                        
Sbjct: 261 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT------------------------ 296

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
                   VID LC+  R++DA+L+ ++   +   P  +  N+++   C     E A+ L
Sbjct: 297 --------VIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEEL 348

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT---------- 170
           F  ML  G+      +N +I   C  G + E+ +  + M R GV+PD IT          
Sbjct: 349 FLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARR 408

Query: 171 -YSILAKGFHLLSQISGAWKVIQKLLIK----------GSDPDIVTYTVLICGYCQIGNV 219
            YS+    + + + +S      ++  +              P + TY +++ G C+    
Sbjct: 409 DYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLT 468

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           ++ L++ + +     KL    +++++ ++ K GR DEA  L     + GL P+  TY ++
Sbjct: 469 DDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 528

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
              +  Q  + +  QL+  M     + +S     I+  L ++  IT A  Y 
Sbjct: 529 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 580


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 157/606 (25%), Positives = 277/606 (45%), Gaps = 41/606 (6%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I GL + S   +A+ FL         P+VV+   ++S + K       K +  +M+  G
Sbjct: 48  MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 107

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG-- 186
            +P+   +N L+H  C       A +  N M   G  P  + Y+I         ++    
Sbjct: 108 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 167

Query: 187 ----AWKVIQKLLIKG---SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               A K+  ++L      +  ++  +   +CG   +G  ++  +L + M+ +GF  +  
Sbjct: 168 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCG---VGKFDKAFQLIKEMMRKGFVPDTS 224

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            YS +++ +C + ++++A  L  EM+ VG+ PD+ TY+ILI   CK   + +A  L+ EM
Sbjct: 225 TYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM 284

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            S   SP    + A++    + + + +A   F  ++ + C  + V Y  ++DG  K GNI
Sbjct: 285 RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNI 344

Query: 360 GEAVQLYRQLI--------------EKR--ISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
            +A ++Y +LI              E R  ++P++VT+ +L+ G CK  KV  A  LLD 
Sbjct: 345 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDA 404

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +   G EP+ + Y   ++ +C+ G I     +  +M      P+  TYT +I  + K  +
Sbjct: 405 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGR 464

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           L  A+++L  M     TP+ +TY  +I   C+  +  KA +LL+ M      P   TY  
Sbjct: 465 LDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 524

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE-- 581
           LIDGL   G +  +  L   +     S   V Y  +I   CA G + KA     +M +  
Sbjct: 525 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY 584

Query: 582 -----KGFEISIRDYTKSFFCM------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
                +G+  +I+ ++KSF         M S G  P   +  +++  F + G L    EL
Sbjct: 585 WPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMEL 644

Query: 631 AAVMIK 636
              M++
Sbjct: 645 HKEMME 650



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 235/520 (45%), Gaps = 22/520 (4%)

Query: 28  KVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           KV++  +   L  +   D  + L  ++       +  T S VI  LC  ++++ A L  Q
Sbjct: 188 KVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ 247

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           E       P V +   ++  +CK G  E A+ LF  M   G  P   +Y  LIH    A 
Sbjct: 248 EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK 307

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD------- 200
            + +A +  + M   G  P+ +TY  L  G      IS A++V  K LI  SD       
Sbjct: 308 QVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK-LIGTSDSADSDFY 366

Query: 201 ----------PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
                     P++VTY  L+ G C+   V+   +L + MLS G + N I Y  L+   CK
Sbjct: 367 FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCK 426

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           +G+ID A  +  +M   G  P + TY+ LI  + K  ++  A+++ ++M     +PN   
Sbjct: 427 AGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 486

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           + A++ GLC      +A      +    C  +VV Y  +IDG  K G I  ++ L+ Q+ 
Sbjct: 487 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 546

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            K  SP+ VT+  LI   C  G +  AR LL  +K          Y   +  + +  +  
Sbjct: 547 RKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFI 604

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI--GVTPDQITYNT 488
             L +L+EME+    P    Y ++I    K  +L+ A++L ++M  +   V  D   Y +
Sbjct: 605 ASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYAS 664

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +I++ C    + +AF+L ++M      P  + +  LI GL
Sbjct: 665 LIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 704



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 218/526 (41%), Gaps = 60/526 (11%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M + G   D F+     H LC  G   +AL+      R   + D +  + +  G    S 
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIE---REDFKLDTVLCTHMISGLMEASY 57

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
              A   + ++      P++VTY  L+ G+ +   +    ++  +M+++G   N   ++ 
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV-------------- 289
           L+ S C       A  LL  M   G  P  V Y+I I  +C Q+K+              
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 290 ---------------------------HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
                                       KA QL  EM  K   P++  +  ++  LC   
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            + +A + F  + M     DV  Y I+ID + K G I +A  L+ ++     SP++VT+ 
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM--- 439
           +LI+ + K  +V  A  +   +   G  P+ VTY   ++  C+ GNI +   +  ++   
Sbjct: 298 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 357

Query: 440 -------------ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
                        +   + P  VTY  ++ GLCK  K+  A +LL+ M   G  P+ I Y
Sbjct: 358 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 417

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           + +I  FCK   +  A ++  QM      P+  TY  LID +  +G L  A  +L  + +
Sbjct: 418 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 477

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            + +   V YT +I   C  G+  KA+     M EKG   ++  YT
Sbjct: 478 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 523



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/515 (25%), Positives = 228/515 (44%), Gaps = 54/515 (10%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTN 66
           G    A  +I +M          TY+ ++  L H    +  + L+ ++K+     +VYT 
Sbjct: 202 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 261

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+ID  C+   ++ A    +E       P+VV+  A++  Y K      A  +F  M+ 
Sbjct: 262 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 321

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEF------TNDMG----------RHGVEPDAIT 170
            G  P+  +Y  L+ GLC AG++ +A E       T+D            RH + P+ +T
Sbjct: 322 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 381

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y  L  G     ++  A +++  +L  G +P+ + Y  LI G+C+ G ++   ++   M 
Sbjct: 382 YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 441

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
             G+  +V  Y+ L+  M K GR+D A+ +L +M      P++VTY+ +I GLC+  +  
Sbjct: 442 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 501

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           KA++L + M  K  SPN   + A++ GL +   I  +   F  +    C  + V Y ++I
Sbjct: 502 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 561

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN--------------GKV-- 394
           +     G + +A  L  ++ +      +  +   I GF K+              G V  
Sbjct: 562 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPI 621

Query: 395 -----------ADARRLLDTIKLHG--LE-PSAVT-----YTTFMNAYCEEGNIQRLLAL 435
                      + A RL   ++LH   +E PS+V      Y + + A C    ++    L
Sbjct: 622 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 681

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
             EM  +   P    +  +IKGL +  K  EA+QL
Sbjct: 682 YSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 716



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 200/443 (45%), Gaps = 27/443 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           + + G++  A ++  +M+ +    ++ TY +L++     +      D++  +  +    N
Sbjct: 268 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 327

Query: 63  VYTNSIVIDGLCQQSRLQDA------ILFLQETAGKEF----------GPSVVSLNAIMS 106
             T   ++DGLC+   +  A      ++   ++A  +F           P+VV+  A++ 
Sbjct: 328 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 387

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
             CK    + A  L   ML  G  P+   Y+ LI G C AG ++ A E    M + G  P
Sbjct: 388 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 447

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
              TY+ L        ++  A KV+ ++L     P++VTYT +I G C+IG  E+ LKL 
Sbjct: 448 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 507

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
            +M  +G   NV+ Y+ L+  + K+G+ID +L L  +M   G  P+ VTY +LI  LC  
Sbjct: 508 SLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAA 567

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
             + KA  L  EM           +   + G   K  I    +  + +     +    +Y
Sbjct: 568 GLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF-SKSFIASLGI-LEEMESYGTVPIAPVY 625

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN----SLIYGFCKNGKVADARRLLD 402
            ++ID + K G +  A++L+++++E  +  S+ T N    SLI   C   +V +A RL  
Sbjct: 626 GMLIDCFSKAGRLEIAMELHKEMME--VPSSVKTDNDMYASLIQALCLASQVEEAFRLYS 683

Query: 403 TIKLHGLEPSAVTYTTFMNAYCE 425
            +   G  P    +   +    E
Sbjct: 684 EMTRRGFVPELSVFVCLIKGLVE 706



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 149/316 (47%), Gaps = 11/316 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           + + G +  A  V  +M +     S+ TY SL+  +    R    M  L   +K S TP 
Sbjct: 424 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP- 482

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + +IDGLC+    + A+  L     K   P+VV+  A++    K G  +++  LF
Sbjct: 483 NVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLF 542

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G  P+  +Y +LI+ LC AG +++A     +M +         Y    +GF   
Sbjct: 543 TQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFS-- 600

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS--QGFKLNVI 239
                +  +++++   G+ P    Y +LI  + + G +E  ++L + M+      K +  
Sbjct: 601 KSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDND 660

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L+ ++C + +++EA  L  EM   G  P+L  +  LI+GL +  K  +A+QL   +
Sbjct: 661 MYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGI 720

Query: 300 CSKRIS--PNSFAHGA 313
           C + ++   N   HG 
Sbjct: 721 CHEGVNWQGNKSFHGG 736



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 95/228 (41%), Gaps = 15/228 (6%)

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T     +  CK G+ ADA   LD I+    +   V  T  ++   E       ++ L  M
Sbjct: 12  TVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM 68

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
              +  P  VTY  ++ G  K+ +L    +++  M   G  P+   +N+++ S+C  KD 
Sbjct: 69  RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDY 128

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH--------NISL 551
             A++LLN+M      P    YNI I  +C    L + D  L+ L E         N  L
Sbjct: 129 AYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD--LLDLAEKIYGEMLAANCVL 186

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC 597
            KV      +  C  G   KA     +M+ KGF      Y+K  +F C
Sbjct: 187 NKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 234


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 237/487 (48%), Gaps = 5/487 (1%)

Query: 96   PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH--PDAFSYNILIHGLCIAGSMEEAL 153
            PS+V+ N ++  + K G  +    L   M   G    P+  +YN++I GL   G +EEA 
Sbjct: 1117 PSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAA 1176

Query: 154  EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
            E    M R   +  + TY+ L  G      +   + +  ++  +G  P +VTY  +I G 
Sbjct: 1177 ELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGL 1235

Query: 214  CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
             Q G VE        M + G   +VI Y+ LL+  CK+G + EAL L  ++   GL P +
Sbjct: 1236 LQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTV 1295

Query: 274  VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            +TY+ILI G C+   + +A  L  EM  +   PN   +  ++ G      +  AR +FD 
Sbjct: 1296 LTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDE 1355

Query: 334  LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
            ++      D   YN  I   + LG+I  A +L   L+ + IS   VT+N LI+G CK G 
Sbjct: 1356 MLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGN 1415

Query: 394  VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
            + DA+ L   +  +GL+P  +TYT  ++A+CE G ++    +   M +  + P+ VT+TV
Sbjct: 1416 LKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTV 1475

Query: 454  VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
            +I   C++  L  A      M   GV P++ITYN +I + C+    + A    ++M    
Sbjct: 1476 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERG 1535

Query: 514  LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
            L     TY +LIDG C  G+ ++A      + ++ I    + +  ++K    +G VH  +
Sbjct: 1536 LVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF--DGHVHHTI 1593

Query: 574  TFFCQMV 580
             +   ++
Sbjct: 1594 EYLDNVI 1600



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 246/516 (47%), Gaps = 20/516 (3%)

Query: 121  FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
            F  M  +G+ PD    N ++  L  A   ++      +M   G+EP  +TY+ L   F  
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 181  LSQISGAWKVIQKLLIKGSD--PDIVTYTVLICGYCQIGNVEEGLKLREVM-LSQGFKLN 237
              +      +++++  +GS   P+ VTY V+I G  + G++EE  +L E M LS+  K +
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK--KAS 1189

Query: 238  VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
               Y+ L++ +   G + +   L  EME  G+ P +VTY+ +I GL +   V  A   + 
Sbjct: 1190 SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 1249

Query: 298  EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            EM +  + P+   + ++L G C+   + EA + F  L  +     V+ YNI+IDGY +LG
Sbjct: 1250 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLG 1309

Query: 358  NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            ++ EA  L  ++ E+   P++ T+  L+ G      +A AR   D +   GL+P    Y 
Sbjct: 1310 DLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYN 1369

Query: 418  TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
            T + A    G+I R   L + +  + I    VTY ++I GLCK   L++A +L   M   
Sbjct: 1370 TRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSN 1429

Query: 478  GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
            G+ PD ITY  +I + C+   LR+A ++ N M    L P++ T+ ++I   C  G+L +A
Sbjct: 1430 GLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSA 1489

Query: 538  DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT----- 592
                  + E  +   ++ Y  +I A C  G    A   F +M+E+G   +   YT     
Sbjct: 1490 YGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDG 1549

Query: 593  ----------KSFFCMMLSNGFPPDQEICEVMLIAF 618
                        F+  M  NG  PD    + +L  F
Sbjct: 1550 NCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 221/455 (48%), Gaps = 39/455 (8%)

Query: 7    SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYD---DIKVSETPRNV 63
            +R G + +A  ++  M+ L  K S  TYN L+  L     +  +YD   +++       V
Sbjct: 1167 TRKGDLEEAAELVEGMR-LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTV 1225

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             T + +I GL Q   ++ A +   E       P V++ N++++ YCK G  + A  LF  
Sbjct: 1226 VTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGD 1285

Query: 124  MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
            + + GL P   +YNILI G C  G +EEA     +MG  G  P+  TY+IL KG   +  
Sbjct: 1286 LRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRS 1345

Query: 184  ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
            ++ A +   ++L KG  PD   Y   IC    +G++    +LREV++ +G   + + Y++
Sbjct: 1346 LAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNI 1405

Query: 244  LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
            L+  +CK+G + +A  L  +M + GL+PD +TY+ LI   C++  + +A +++N M S  
Sbjct: 1406 LIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDG 1465

Query: 304  ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            + P++                                   V + ++I  Y + GN+  A 
Sbjct: 1466 LLPSA-----------------------------------VTFTVIIHAYCRRGNLYSAY 1490

Query: 364  QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
              +R+++E+ + P+ +T+N LI+  C+ G+   A      +   GL  +  TYT  ++  
Sbjct: 1491 GWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGN 1550

Query: 424  CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            C+ GN +  +    EM    I P ++T+  ++KG 
Sbjct: 1551 CKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 215/428 (50%), Gaps = 29/428 (6%)

Query: 225  LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK--PDLVTYSILIRG 282
            + E ML  G + +++ Y+ LL S  K GR D+   LL EME  G    P+ VTY+++I G
Sbjct: 1106 VHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITG 1165

Query: 283  LCKQDKVHKAIQLYNEM-CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN--C 339
            L ++  + +A +L   M  SK+ S  SF +  ++ GL  +  +   ++Y   L M N   
Sbjct: 1166 LTRKGDLEEAAELVEGMRLSKKAS--SFTYNPLITGLLARGCVK--KVYDLQLEMENEGI 1221

Query: 340  IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
            +  VV YN MI G ++ G +  A   + ++    + P ++T+NSL+ G+CK G + +A  
Sbjct: 1222 MPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALL 1281

Query: 400  LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
            L   ++  GL P+ +TY   ++ YC  G+++    L +EM  +   P   TYT+++KG  
Sbjct: 1282 LFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSL 1341

Query: 460  KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
                L  A +  ++M   G+ PD   YNT I +     D+ +AF+L   + L  +   + 
Sbjct: 1342 NVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTV 1401

Query: 520  TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            TYNILI GLC  G+LK+A  L + +  + +    + YT +I AHC  G + +A       
Sbjct: 1402 TYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREA------- 1454

Query: 580  VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                         +  F  M+S+G  P      V++ A+ + G+L S +     M++ G+
Sbjct: 1455 -------------RKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGV 1501

Query: 640  LPDKFLIN 647
             P++   N
Sbjct: 1502 EPNEITYN 1509


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 166/660 (25%), Positives = 295/660 (44%), Gaps = 21/660 (3%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
            + G V +A   +  MK+  +  ++ TYN+L   L  L   D   +L++ ++        Y
Sbjct: 379  KVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAY 438

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T  + ID   +      AI   ++       P++V+ NA +    + G  E AK  F  +
Sbjct: 439  TYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGL 498

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             K GL PDA +YNIL+     AG +++A++  ++M  +G +P+ +  + L    +   ++
Sbjct: 499  KKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRV 558

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
              AWK+ Q++      P +VTY  L+ G  + G V+E   L + M++     N I+++ L
Sbjct: 559  DEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTL 618

Query: 245  LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
            L  +CK+G +D AL +L+ M  +   PD++TY+ +I GL K+++V+ A  L+++M  K I
Sbjct: 619  LDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVI 677

Query: 305  SPNSFAHGAILLGLCEKEMITEA-RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+      +L G+ +   I +A R+  + +       D   +  ++ G +    IG+++
Sbjct: 678  YPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSI 737

Query: 364  QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL-LDTIKLHGLEPSAVTYTTFMNA 422
                 L+   I         L+   CK+GK  DA  + L   K   + PS   Y + ++ 
Sbjct: 738  LFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDG 797

Query: 423  YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
              +    +    L  +M+     P   TY + +  L K  K++E   L E+M   G  P+
Sbjct: 798  LLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPN 857

Query: 483  QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             IT+N +I    K   L KA  L   +   +  PT  TY  LIDGL   G L+ A     
Sbjct: 858  TITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFE 917

Query: 543  SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS- 601
             + ++        Y  ++     +GDV  A   F +MV++G    ++ Y+    C+ +  
Sbjct: 918  EMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVG 977

Query: 602  --------------NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                          +G  PD     +M+    +   +     L   M   G+ PD +  N
Sbjct: 978  KVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYN 1037



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 224/470 (47%)

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           K GF   A  ++  M+  G+ P   +Y+ L+  L     +E  +    +M   G+ P+  
Sbjct: 204 KSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIY 263

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           T++I  +      +I  A+ +++++   G  PD+VTYTVLI   C  G +    +L   M
Sbjct: 264 TFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKM 323

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
            +   K + + Y  LL      G +D       EMEA G  PD+VT++ILI  LCK  KV
Sbjct: 324 KASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKV 383

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A    + M  + ++PN   +  ++ GL     + EA   F+S+           Y + 
Sbjct: 384 DEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILF 443

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           ID Y K G  G+A++ + ++    I P+IV  N+ +Y   + G++ +A+   + +K  GL
Sbjct: 444 IDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGL 503

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P A+TY   M  Y + G +   + LL EME     P  V    +I  L K  ++ EA +
Sbjct: 504 APDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWK 563

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           + + M  + + P  +TYNT++    K   +++A  L   M   +  P + ++N L+D LC
Sbjct: 564 MFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLC 623

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            NG++  A  +L  + E N     + Y T+I     E  V+ A   F QM
Sbjct: 624 KNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM 673



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 145/593 (24%), Positives = 266/593 (44%), Gaps = 80/593 (13%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
            Y + G V DA+ ++++M+E      +   NSL   LY     D  W ++  +K  +    
Sbjct: 517  YGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPT 576

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            V T + ++ GL ++ R+Q+A    +     +  P+ +S N ++   CK G  ++A  +  
Sbjct: 577  VVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLF 636

Query: 123  LMLK--------------YGL--------------------HPDAFSYNILIHGLCIAGS 148
             M +              YGL                    +PD  +   L+ G+   G 
Sbjct: 637  RMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGR 696

Query: 149  MEEAL----EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI-------- 196
            +E+A     EF + +G H    D   +  L  G  + ++I  +    + L+         
Sbjct: 697  IEDAFRVAKEFVHHVGDHA---DGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDS 753

Query: 197  -------------KGSD---------------PDIVTYTVLICGYCQIGNVEEGLKLREV 228
                         K  D               P +  Y  LI G  +    E    L   
Sbjct: 754  VLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYK 813

Query: 229  MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
            M + G   +V  Y++ L ++ KSG+I E   L  EM   G KP+ +T++I+I GL K + 
Sbjct: 814  MKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNS 873

Query: 289  VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
            + KAI LY ++ S   SP  + +G ++ GL +   + EA+ +F+ ++   C+ +  LYNI
Sbjct: 874  LDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNI 933

Query: 349  MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
            +++G+ K G++  A +L+R+++++ I P + +++ ++   C  GKV DA    + +KL G
Sbjct: 934  LMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSG 993

Query: 409  LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
            L+P  V Y   +N       ++  L+L  EM  + I P   TY  +I  L     ++EA 
Sbjct: 994  LDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAG 1053

Query: 469  QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            ++ E++ + G+ P+  TYN +IR      +  +A+ +  +M +    P + T+
Sbjct: 1054 KMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 234/465 (50%), Gaps = 8/465 (1%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F LM K  +     +Y  +   L I G + EA      M + G   +  +Y  L    H
Sbjct: 144 VFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGL---IH 200

Query: 180 LLSQISG----AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
           LL + SG    A KV ++++ +G  P + TY+ L+    +  ++E  + L + M S G +
Sbjct: 201 LLLK-SGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLR 259

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            N+  +++ +  + ++G+IDEA G+L  M+  G  PD+VTY++LI  LC   K++ A +L
Sbjct: 260 PNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKEL 319

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           + +M +    P+   +  +L    +   +   + ++  +     + DVV + I+ID   K
Sbjct: 320 FLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCK 379

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +G + EA      + ++ ++P++ T+N+LI G  +  ++ +A  L ++++  GLE +A T
Sbjct: 380 VGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYT 439

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y  F++ Y + G   + +   ++M+T  I P  V     +  L +Q +L+EA +    + 
Sbjct: 440 YILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLK 499

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G+ PD ITYN ++R + K   +  A +LL++M  +  +P     N LID L     + 
Sbjct: 500 KCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVD 559

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
            A  +   ++E  ++ T V Y T++     EG V +A   F  M+
Sbjct: 560 EAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMI 604



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 158/696 (22%), Positives = 292/696 (41%), Gaps = 93/696 (13%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           ++G   +A+ V  +M    +K S++TY++L+  L   R  + +  L  +++      N+Y
Sbjct: 204 KSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIY 263

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I I  L +  ++ +A   L+       GP VV+   ++   C  G    AK LF  M
Sbjct: 264 TFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKM 323

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
                 PD  +Y  L+      G ++   EF ++M   G  PD +T++IL      + ++
Sbjct: 324 KASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKV 383

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR------------------ 226
             A+  +  +  +G  P++ TY  LICG  ++  ++E L+L                   
Sbjct: 384 DEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILF 443

Query: 227 -----------------EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
                            E M + G   N++A +  L S+ + GR++EA      ++  GL
Sbjct: 444 IDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGL 503

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            PD +TY+IL+R   K  +V  AI+L +EM                              
Sbjct: 504 APDAITYNILMRCYGKAGRVDDAIKLLSEMEE---------------------------- 535

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
                  + C  +VV+ N +ID   K   + EA ++++++ E +++P++VT+N+L+ G  
Sbjct: 536 -------NGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLG 588

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K G+V +A  L   +      P+ +++ T ++  C+ G +   L +L  M      P  +
Sbjct: 589 KEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVL 648

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY  VI GL K+ ++  A  L   M  + + PD +T  T++    K   +  AF++  + 
Sbjct: 649 TYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEF 707

Query: 510 WLHNLEPTSATY-NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
             H  +    ++   L+ G+ +  ++  +     SL  + I         ++K  C  G 
Sbjct: 708 VHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGK 767

Query: 569 VHKAMTFFCQMVEKGFEIS-----------------IRDYTKSFFCMMLSNGFPPDQEIC 611
              A   F ++  K F I+                 + +     F  M + G  PD    
Sbjct: 768 AVDAYNVFLKLT-KSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTY 826

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            + L A  + G +  +F+L   M+  G  P+    N
Sbjct: 827 NLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHN 862



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 150/654 (22%), Positives = 283/654 (43%), Gaps = 78/654 (11%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT--------------------- 44
            Y ++G    A+    KMK   +  +I   N+ LY+L                        
Sbjct: 447  YGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPD 506

Query: 45   ----DIMWDLY-------DDIK-VSE------TPRNVYTNSIVIDGLCQQSRLQDAILFL 86
                +I+   Y       D IK +SE       P  V  NS+ ID L +  R+ +A    
Sbjct: 507  AITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSL-IDTLYKADRVDEAWKMF 565

Query: 87   QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            Q     +  P+VV+ N +++   K G  + A  LF  M+     P+  S+N L+  LC  
Sbjct: 566  QRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKN 625

Query: 147  GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
            G ++ AL+    M      PD +TY+ +  G    ++++ A+ +  ++  K   PD VT 
Sbjct: 626  GEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTL 684

Query: 207  TVLICGYCQIGNVEEGLKL-------------------------------REVMLSQGFK 235
              L+ G  + G +E+  ++                               + ++ ++   
Sbjct: 685  CTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLV 744

Query: 236  LNVIAYS-----VLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKV 289
             N I         L+  +CK G+  +A  +  ++ ++  + P L  Y+ LI GL K    
Sbjct: 745  CNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLT 804

Query: 290  HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
              A  L+ +M +   +P+ F +   L  L +   I E    ++ ++   C  + + +NI+
Sbjct: 805  EMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIV 864

Query: 350  IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
            I G VK  ++ +A+ LY  L+    SP+  T+  LI G  K G++ +A++  + +  +G 
Sbjct: 865  IFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGC 924

Query: 410  EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
             P+   Y   MN + ++G+++    L + M  + I P   +Y++++  LC   K+ +A+ 
Sbjct: 925  MPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALH 984

Query: 470  LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
              E++ + G+ PD + YN +I    + + + +A  L ++M    + P   TYN LI  L 
Sbjct: 985  YFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLG 1044

Query: 530  VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            + G ++ A  +   LQ   +      Y  +I+ H   G+  +A   + +M+  G
Sbjct: 1045 IAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGG 1098



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 168/350 (48%), Gaps = 1/350 (0%)

Query: 73   LCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
            LC+  +  DA  +FL+ T      PS+ + N+++    K    E+A GLF  M   G  P
Sbjct: 762  LCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTP 821

Query: 132  DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
            D F+YN+ +  L  +G ++E  +   +M   G +P+ IT++I+  G    + +  A  + 
Sbjct: 822  DVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLY 881

Query: 192  QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
              L+     P   TY  LI G  ++G +EE  +  E ML  G   N   Y++L++   K 
Sbjct: 882  YDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQ 941

Query: 252  GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            G ++ A  L   M   G++PDL +YSI++  LC   KV  A+  + E+    + P+   +
Sbjct: 942  GDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCY 1001

Query: 312  GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
              ++ GL   + + EA   FD +       D+  YN +I      G + EA ++Y +L  
Sbjct: 1002 NLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQL 1061

Query: 372  KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            K + P++ T+N+LI G   +G    A  +   + + G  P+  T+    N
Sbjct: 1062 KGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 139/279 (49%), Gaps = 13/279 (4%)

Query: 14   DAVFVIAKMKEL-DL---------KVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETP 60
            DA+    K+KEL DL         K +  T+N +++ L  +   D   DLY D+   +  
Sbjct: 831  DALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFS 890

Query: 61   RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
               +T   +IDGL +  RL++A  F +E       P+    N +M+ + K G  E A  L
Sbjct: 891  PTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACEL 950

Query: 121  FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
            F  M+K G+ PD  SY+I++  LC+ G +++AL +  ++   G++PD + Y+++  G   
Sbjct: 951  FRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGR 1010

Query: 181  LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              ++  A  +  ++  +G  PD+ TY  LI      G VEE  K+ E +  +G + NV  
Sbjct: 1011 SQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFT 1070

Query: 241  YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            Y+ L+     SG  D A  +  +M   G +P+  T++ L
Sbjct: 1071 YNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 243/495 (49%), Gaps = 15/495 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + +IDG C+  RL DA+  +   A     P   + N ++   C     E A+ L 
Sbjct: 157 NVVTYTALIDGYCRSGRLDDALRLI---ASMPVAPDTYTYNTVLKGLCIAKKWEEAEELM 213

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M++    P+  ++   I   C  G ++ A++  + M R+G  PD + YS L  GF   
Sbjct: 214 AEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQ 273

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A  ++  +L K   P+ V Y   + G C     E+  +L   M+ +G   N   +
Sbjct: 274 GHVDQALDLLNTMLCK---PNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATF 330

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           S+L+SS+C++  +D A+ +L +ME  G +PD V Y+I+I  L ++ +V  A++L N M  
Sbjct: 331 SMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVC 390

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   P++    A+L G C  E   +A      +   +C    + +NI+ID   + G +  
Sbjct: 391 K---PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNY 447

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A Q++ Q+   R +P IVT++SL+ GF + G V  A +L  ++     +P   +Y   + 
Sbjct: 448 ATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLK 504

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C     +    L+ EM  K   P  VT+ ++I  LC++  +  A+++LE M   G TP
Sbjct: 505 GLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTP 564

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D  TYN +I  F +   L  A +LL+ M   + +P + +YN  + GLC     ++A+ L+
Sbjct: 565 DIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELV 621

Query: 542 VSLQEHNISLTKVAY 556
             +  +  +  +V +
Sbjct: 622 AEMLRNKCTPNEVTF 636



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 235/485 (48%), Gaps = 20/485 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y R+G + DA+ +IA M    +     TYN++L  L    +  +    + + I+ +  P 
Sbjct: 168 YCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIR-NRCPP 223

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T +  I   CQ   L  A+  L +       P VV  + +++ + + G  + A  L 
Sbjct: 224 NEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLL 283

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML     P+   YN  + GLCIA   E+  E   +M R G  P+  T+S+L       
Sbjct: 284 NTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQN 340

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           + +  A +V++++   G +PD V Y ++I    + G V++ L+L   M+    K + + +
Sbjct: 341 NLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVC---KPDALGF 397

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +L   C++ R  +A  L+ +M         +T++ILI  LC+   V+ A Q++ +M  
Sbjct: 398 NAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPR 457

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
            R +P+   + ++L G  E+ ++  A   F S+    C  D+  YN ++ G  +     +
Sbjct: 458 YRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWED 514

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +L  +++ K   P+ VTFN LI   C+ G V  A  +L+ +  +G  P   TY   +N
Sbjct: 515 AGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALIN 574

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            + E+G +   L LL  M  K   P  ++Y   +KGLC+  + Q+A +L+ +M     TP
Sbjct: 575 GFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTP 631

Query: 482 DQITY 486
           +++T+
Sbjct: 632 NEVTF 636



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 239/521 (45%), Gaps = 14/521 (2%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+I  LC   RL DA   L            VS N +++ YC+ G    A+ +      
Sbjct: 94  NILIKKLCATRRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGAARA 152

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G   +  +Y  LI G C +G +++AL     M    V PD  TY+ + KG  +  +   
Sbjct: 153 TGAA-NVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWEE 208

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +++ +++     P+ VT+   I  +CQ G ++  ++L + M   G   +V+ YS L++
Sbjct: 209 AEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLIN 268

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
              + G +D+AL LL  M     KP+ V Y+  ++GLC  ++     +L  EM  K  SP
Sbjct: 269 GFSEQGHVDQALDLLNTMLC---KPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSP 325

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N      ++  LC+  ++  A    + +    C  D V YNI+I+   + G + +A++L 
Sbjct: 326 NEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLL 385

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             ++ K   P  + FN+++ GFC+  +  DA  L+  +         +T+   ++  C+ 
Sbjct: 386 NSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQN 442

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G +     + ++M      P  VTY+ ++ G  +Q  ++ A+QL   M      PD  +Y
Sbjct: 443 GLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSY 499

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           N +++  C+      A +L+ +M   +  P   T+NILI+ LC  G +  A  +L  +  
Sbjct: 500 NAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPN 559

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           +  +     Y  +I     +G +  A+     M  K   IS
Sbjct: 560 YGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCKPDAIS 600



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 217/456 (47%), Gaps = 22/456 (4%)

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           V++  L+ GYC+ G + +  ++     + G   NV+ Y+ L+   C+SGR+D+AL L+  
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGAARATG-AANVVTYTALIDGYCRSGRLDDALRLIAS 183

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M    + PD  TY+ +++GLC   K  +A +L  EM   R  PN       +   C+  +
Sbjct: 184 MP---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           +  A    D +    C  DVV+Y+ +I+G+ + G++ +A+ L   ++ K   P+ V +N+
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYNA 297

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
            + G C   +  D   L+  +   G  P+  T++  +++ C+   +   + +L++ME   
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             P  V Y ++I  L ++ ++ +A++LL  M      PD + +N +++ FC+ +    A 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMVC---KPDALGFNAVLKGFCRAERWHDAS 414

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           +L+ QM+  +      T+NILID LC NG +  A  +   +  +  +   V Y++++   
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 474

Query: 564 CAEGDVHKAMTFFCQM-----------VEKGFEISIR-DYTKSFFCMMLSNGFPPDQEIC 611
             +G V  A+  F  M           V KG   + R +        M+    PP++   
Sbjct: 475 SEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTF 534

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            +++ +  Q G +    E+   M   G  PD F  N
Sbjct: 535 NILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYN 570



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 25/280 (8%)

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI---QRLLAL 435
           ++ N LI   C   ++ADA R+LD +K       AV++ T +  YC +G +   +R+L  
Sbjct: 91  ISCNILIKKLCATRRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLG- 148

Query: 436 LQEMETKAIGPTHV-TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
                 +A G  +V TYT +I G C+  +L +A++L+  M    V PD  TYNT+++  C
Sbjct: 149 ----AARATGAANVVTYTALIDGYCRSGRLDDALRLIASM---PVAPDTYTYNTVLKGLC 201

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
             K   +A +L+ +M  +   P   T+   I   C NG L  A  LL  +  +  +   V
Sbjct: 202 IAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVV 261

Query: 555 AYTTIIKAHCAEGDVHKAM----TFFCQ-------MVEKGFEISIR-DYTKSFFCMMLSN 602
            Y+T+I     +G V +A+    T  C+          KG  I+ R +        M+  
Sbjct: 262 IYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRK 321

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           G  P++    +++ +  Q   + S  E+   M K G  PD
Sbjct: 322 GCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPD 361


>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 738

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 231/476 (48%), Gaps = 12/476 (2%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           ++D++K +    + Y  +  I+GLC+ +R       LQ+   +       +  A++  +C
Sbjct: 247 VFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFC 306

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
                + A+ +F  M K GL PD + Y  L+HG C + + ++AL     M   G++ + +
Sbjct: 307 NETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCV 366

Query: 170 TYSILAKGFHLLSQISGAWKVI---QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
            +S +    H L ++  A +V+   ++    G   D   Y +L    C++G V++ + + 
Sbjct: 367 IFSCI---LHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGML 423

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           + + S    +++  Y+ L++     G+  EA  L  EME  G KPD+V Y++L  G  + 
Sbjct: 424 DELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRN 483

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
               +A+ L N M S+ + PNS  H  I+ GLC    + EA  +F+ L   +    V +Y
Sbjct: 484 RTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIY 543

Query: 347 NIMIDGYV------KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
             +++GY       K   + EA  L R ++E  + PS V ++ +    C NG +  A  L
Sbjct: 544 TALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTL 603

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            +     G  P AVTYT  +N YC+   +     L ++M+ + I P  VTYT++I G CK
Sbjct: 604 FNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCK 663

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
              L+EA +L +DM   G+ PD I Y  II+          AFQL N+M    + P
Sbjct: 664 MNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTP 719



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 245/550 (44%), Gaps = 42/550 (7%)

Query: 76  QSRLQDAILFLQETAGKE-FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           Q+   +AI FL +T       P+++S N +++R  K    ++A  LF     +GL  + +
Sbjct: 167 QNMFVEAIDFLLQTRKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEY 226

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI------------------------- 169
           +Y I+I  LC  G  E  +   ++M   GV+ D+                          
Sbjct: 227 TYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDY 286

Query: 170 ----------TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
                      Y+ + +GF   +++  A  V  ++  +G  PD+  Y  L+ GYC   N 
Sbjct: 287 RTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNF 346

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           ++ L + + M+S+G K N + +S +L  + + GR  E + +  E +  GL  D   Y+IL
Sbjct: 347 DKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNIL 406

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
              LCK  KV  A+ + +E+ S ++  +   +  ++ G   +    EA+  F  +     
Sbjct: 407 FDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGF 466

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             DVV YN++  G+ +     EA+ L   +  + + P+  T   +I G C  GKV +A  
Sbjct: 467 KPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEE 526

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR------LLALLQEMETKAIGPTHVTYTV 453
             + +K   +E S   YT  +N YCE   I++         LL+ M    + P+ V Y+ 
Sbjct: 527 FFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSK 586

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +   LC    ++ A  L       G TPD +TY  +I  +CK   L +A +L   M    
Sbjct: 587 IFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERG 646

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           + P + TY I+I+G C    L+ A  L   ++E  I    +AYT IIK     G    A 
Sbjct: 647 ITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAF 706

Query: 574 TFFCQMVEKG 583
             + +M++ G
Sbjct: 707 QLYNEMIDMG 716



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 110/463 (23%), Positives = 206/463 (44%), Gaps = 21/463 (4%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P+I+++  LI    +   V+  L L     S G   N   Y++++ ++CK G  +  + +
Sbjct: 188 PNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRV 247

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
             EM+  G+  D   Y+  I GLCK ++      +  +  ++    + +A+ A++ G C 
Sbjct: 248 FDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCN 307

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
           +  + EA   F  +     + DV +Y  ++ GY    N  +A+ +Y+ +I + I  + V 
Sbjct: 308 ETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVI 367

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           F+ +++   + G+  +   + +  K  GL      Y    +A C+ G +   + +L E++
Sbjct: 368 FSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELK 427

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
           +  +      YT +I G   Q K  EA  L ++M   G  PD + YN +   F + +   
Sbjct: 428 SMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDF 487

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +A  LLN M    +EP S T+ I+I+GLC  G ++ A+     L+  ++ ++   YT ++
Sbjct: 488 EAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALV 547

Query: 561 KAHCAEGDVHK------AMTFFCQMVEKGFEISIRDYTKSF---------------FCMM 599
             +C    + K      A      M+E   + S   Y+K F               F + 
Sbjct: 548 NGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLF 607

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +  GF PD     +M+  + +   L    EL   M + G+ PD
Sbjct: 608 IHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPD 650



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 170/372 (45%), Gaps = 41/372 (11%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           D++++ K S    +    +I+ D LC+  ++ DA+  L E    +    +     +++ Y
Sbjct: 386 DMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGY 445

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
              G    A+ LF  M + G  PD  +YN+L  G     +  EA++  N M   GVEP++
Sbjct: 446 FLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNS 505

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE- 227
            T+ I+ +G     ++  A +    L  +  +  +  YT L+ GYC+   +E+  +L+E 
Sbjct: 506 TTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEA 565

Query: 228 -----VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
                 ML    K + + YS + +++C +G ++ A  L       G  PD VTY+I+I G
Sbjct: 566 FILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMING 625

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
            CK + + +A +L+ +M  + I+P                                   D
Sbjct: 626 YCKTNCLPEAHELFKDMKERGITP-----------------------------------D 650

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
            V Y IMI+GY K+  + EA +L++ + E+ I P ++ +  +I G   +G    A +L +
Sbjct: 651 AVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYN 710

Query: 403 TIKLHGLEPSAV 414
            +   G+ P A 
Sbjct: 711 EMIDMGMTPGAT 722



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 152/343 (44%), Gaps = 44/343 (12%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           G   + V +  + KE  L +  + YN L   L  L   D    + D++K  +   ++   
Sbjct: 379 GRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHY 438

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I+G   Q +  +A    +E   + F P VV+ N + + + +      A  L   M  
Sbjct: 439 TTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMES 498

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF-------- 178
            G+ P++ ++ I+I GLC AG +EEA EF N +    VE     Y+ L  G+        
Sbjct: 499 QGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEK 558

Query: 179 -HLLSQ--------------------------------ISGAWKVIQKLLIKGSDPDIVT 205
            H L +                                + GA  +    +  G  PD VT
Sbjct: 559 SHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVT 618

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           YT++I GYC+   + E  +L + M  +G   + + Y+++++  CK   + EA  L  +M+
Sbjct: 619 YTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMK 678

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
             G+KPD++ Y+++I+GL        A QLYNEM    ++P +
Sbjct: 679 ERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTPGA 721



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 95/435 (21%), Positives = 163/435 (37%), Gaps = 80/435 (18%)

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G   ++ TY+ +IR LC  +   K   L+ ++         F                E 
Sbjct: 90  GFSHNIQTYTSIIRILCYYNLDRKLDSLFLDIIDHSKQDPCF----------------EI 133

Query: 328 RMYFDSLI--MSNCIQDVVLYNIMIDGYVKL----GNIGEAVQLYRQLIEKR----ISPS 377
            + FDSL   +++  +D  L+N   +G+VK         EA+     L++ R    I P+
Sbjct: 134 NVLFDSLFEGVNDVNEDHYLFN-AFNGFVKACVSQNMFVEAIDF---LLQTRKNVVILPN 189

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           I++FN LI    K+ +V  A  L    K  GL  +  TYT  + A C++G+ + ++ +  
Sbjct: 190 ILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFD 249

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM+   +      Y   I+GLCK  +      +L+D         +  Y  +IR FC   
Sbjct: 250 EMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNET 309

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA--------------DCLLVS 543
            L +A  +  +M    L P    Y  L+ G C + +   A              +C++ S
Sbjct: 310 KLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFS 369

Query: 544 ---------------------LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
                                 +E  + + + AY  +  A C  G V  A+    ++   
Sbjct: 370 CILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSM 429

Query: 583 GFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
             ++ ++ YT               +S F  M   GF PD     V+   F +       
Sbjct: 430 QLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEA 489

Query: 628 FELAAVMIKSGLLPD 642
            +L   M   G+ P+
Sbjct: 490 MDLLNYMESQGVEPN 504


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 256/538 (47%), Gaps = 21/538 (3%)

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           Y+  +++ GLC + R+++    ++   G+   P  V  N ++  YC+ G  +V +GL  L
Sbjct: 277 YSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRG--DVGRGLLLL 334

Query: 124 --MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G+ P   +Y  +IH L     + +      +M   G+ P+   Y+ +       
Sbjct: 335 GEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKC 394

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
              S A  V+ +++    DPD+VT+  LI  +C+ G+VEE LKL    + +  + N ++Y
Sbjct: 395 RSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSY 454

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C  G +  A  LL EM   G  PD+VT   LI GL    +V +A+ +  +M  
Sbjct: 455 TPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAE 514

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +++ P++  +  ++ GLC+K M++ A+     ++      D  +Y  +IDG+++   + +
Sbjct: 515 RQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSD 574

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A +++  + EK     IV +N++I G+CK+G + +A   + +++  G  P   TYTT ++
Sbjct: 575 ARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLID 634

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            Y ++G+I+  L  L +M  +   P  VTY  +I G C       A  L   M   G+ P
Sbjct: 635 GYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFP 694

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL--CVNGDLKNADC 539
           + + Y  +I S  K     +A      M L++  P  AT + L++GL  C  G + N++C
Sbjct: 695 NVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYG-MINSNC 753

Query: 540 LLVSLQEHNISLTKV--------------AYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
                     +L  V              AY  II + C    + KAM    +M  KG
Sbjct: 754 SDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKG 811



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 247/562 (43%), Gaps = 36/562 (6%)

Query: 115 EVAKGLFCLMLKYGLH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
           E A+ L+  ML        D +S  +++ GLC+ G +EE           G  P A+ Y+
Sbjct: 256 ECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYN 315

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
           +L  G+     +     ++ ++ +KG  P +VTY  +I    +  ++ +   L   M  +
Sbjct: 316 VLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKER 375

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   NV  Y+ ++ ++CK     +AL +L +M A    PD+VT++ LI   C++  V +A
Sbjct: 376 GLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEA 435

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           ++L  E   + + PN  ++  ++ G C +  +  A      +I      DVV    +I G
Sbjct: 436 LKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHG 495

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
            V  G + EA+ +  ++ E+++ P    +N LI G CK   ++ A+ LL  +    ++P 
Sbjct: 496 LVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPD 555

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
              YTT ++ +     +     + + ME K      V Y  +IKG CK   + EAV  + 
Sbjct: 556 KFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMS 615

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            M  +G  PD+ TY T+I  + K  D++ A + L  M     +P   TY  LI G C  G
Sbjct: 616 SMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIG 675

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKA--------------------HCAEGDVHKA 572
           +  +A+ L  S+Q   +    V YT +I +                    HC+  D    
Sbjct: 676 NTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDA--T 733

Query: 573 MTFF------CQ--MVEKGFEISIRDYTKS----FFCMMLSNGFPPDQEICEVMLIAFHQ 620
           M +       C+  M+      + + + KS     F  ++S+G  P       ++ +  +
Sbjct: 734 MHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCR 793

Query: 621 GGDLGSVFELAAVMIKSGLLPD 642
              LG   EL   M   G LPD
Sbjct: 794 HNMLGKAMELKEKMSNKGCLPD 815



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 224/486 (46%), Gaps = 15/486 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V T   +I  L ++S L      L E   +   P+V   N ++   CK   A  A  + 
Sbjct: 345 TVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVL 404

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+     PD  ++N LI   C  G +EEAL+   +  R  +EP+ ++Y+ L  GF + 
Sbjct: 405 NQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVR 464

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  ++ +++ +G  PD+VT   LI G    G V+E L +RE M  +    +   Y
Sbjct: 465 GEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIY 524

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+S +CK   +  A  LL EM    ++PD   Y+ LI G  + DK+  A +++  M  
Sbjct: 525 NVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEE 584

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K    +  A+ A++ G C+  M+ EA M   S+    CI D   Y  +IDGY K G+I  
Sbjct: 585 KGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKA 644

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A++    ++++R  P+IVT+ SLI G+C  G    A  L  +++  GL P+ V YT  + 
Sbjct: 645 ALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIG 704

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL--CK-------------QWKLQE 466
           +  ++    +  A  + M      P   T   ++ GL  C+               K   
Sbjct: 705 SLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSA 764

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
            + + + +   G+ P    YN II S C+   L KA +L  +M      P   T+  L+ 
Sbjct: 765 LLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLY 824

Query: 527 GLCVNG 532
           G    G
Sbjct: 825 GFSSVG 830



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/460 (23%), Positives = 208/460 (45%), Gaps = 53/460 (11%)

Query: 21  KMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQS 77
           +MKE  L  ++Q YN+++Y L   R       + + +  S    +V T + +I   C++ 
Sbjct: 371 EMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREG 430

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
            +++A+  L+E   +E  P+ +S   ++  +C  G   VA  L   M+  G  PD  +  
Sbjct: 431 DVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLG 490

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
            LIHGL ++G ++EAL     M    V PDA  Y++L  G      +S A  ++ ++L +
Sbjct: 491 ALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQ 550

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
              PD   YT LI G+ +   + +  K+ E M  +G   +++AY+ ++   CKSG ++EA
Sbjct: 551 KVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEA 610

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           +  +  M  VG  PD  TY+ LI G  K+  +  A++   +M  +R  PN   + +++ G
Sbjct: 611 VMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICG 670

Query: 318 LC-----------------------------------EKEMITEARMYFDSLIMSNCIQD 342
            C                                   +K+   +A  YF+ +++++C  +
Sbjct: 671 YCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPN 730

Query: 343 VVLYNIMIDGYV--KLGNIGEA-------------VQLYRQLIEKRISPSIVTFNSLIYG 387
               + +++G    + G I                + +++ LI   + P I  +N++I+ 
Sbjct: 731 DATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFS 790

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            C++  +  A  L + +   G  P  VT+ + +  +   G
Sbjct: 791 LCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVG 830



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 140/301 (46%), Gaps = 17/301 (5%)

Query: 362 AVQLYRQLIEKRISPSIVTFNS--LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           A +LY +++ +        +++  ++ G C  G+V + RRL++     G  P AV Y   
Sbjct: 258 ARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVL 317

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ YC  G++ R L LL EME K I PT VTY  +I  L ++  L +   LL +M   G+
Sbjct: 318 IDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGL 377

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +P+   YNT+I + CKC+   +A  +LNQM     +P   T+N LI   C  GD++ A  
Sbjct: 378 SPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALK 437

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           LL       +   +++YT +I   C  G+V  A     +M+ +G    +         ++
Sbjct: 438 LLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLV 497

Query: 600 LSNGFP---------------PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           +S                   PD  I  V++    +   L +   L   M++  + PDKF
Sbjct: 498 VSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKF 557

Query: 645 L 645
           +
Sbjct: 558 V 558


>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
          Length = 690

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/527 (27%), Positives = 260/527 (49%), Gaps = 7/527 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDI-KVSETPRNV 63
           R GMV  A+ +     +L + +   +   +L +L      D++ D +D + +    P  V
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGV 217

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             +  V+D L  +  +  A+ F +    + F   +VS N ++ +   +   EVA  L  L
Sbjct: 218 SAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVL-KGLSVDQIEVASRLLSL 276

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +L  G  P+  ++  LI+G C  G M+ A +    M + G+EPD I YS L  G+     
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +    K+  + L KG   D+V ++  I  Y + G++     + + ML QG   NV+ Y++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +C+ GRI EA G+  ++   G++P +VTYS LI G CK   +     LY +M    
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEA 362
             P+   +G ++ GL ++ ++  A M F   ++   I+ +VV++N +IDG+ +L    EA
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHA-MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++++R +    I P + TF +++      G++ +A  L   +   GLEP A+ Y T ++A
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +C+       L L   M+   I        VVI  L K  ++++A +   ++    + PD
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
            +TYNT+I  +C  + L +A ++   + +    P + T  ILI  LC
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 231/473 (48%), Gaps = 8/473 (1%)

Query: 96  PSVVSLNAIM--SRYCKLGFAEVAKGL--FCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           PS VS +  +  + +CK    EV K L    L+++ G      S N ++ GL +   +E 
Sbjct: 214 PSGVSAHGFVLDALFCK---GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSV-DQIEV 269

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
           A    + +   G  P+ +T+  L  GF    ++  A+ + + +  +G +PD++ Y+ LI 
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           GY + G +  G KL    L +G KL+V+ +S  +    KSG +  A  +   M   G+ P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           ++VTY+ILI+GLC+  ++++A  +Y ++  + + P+   + +++ G C+   +      +
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
           + +I      DVV+Y +++DG  K G +  A++   +++ + I  ++V FNSLI G+C+ 
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
            +  +A ++   + ++G++P   T+TT M     EG ++  L L   M    + P  + Y
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             +I   CK  K    +QL + M    ++ D    N +I    KC  +  A +  N +  
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
             +EP   TYN +I G C    L  A+ +   L+        V  T +I   C
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 187/381 (49%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D  +DL+  ++      ++   S +IDG  +   L        +   K     VV  ++ 
Sbjct: 303 DRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSST 362

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +  Y K G    A  ++  ML  G+ P+  +Y ILI GLC  G + EA      + + G+
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
           EP  +TYS L  GF     +   + + + ++  G  PD+V Y VL+ G  + G +   ++
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
               ML Q  +LNV+ ++ L+   C+  R DEAL +   M   G+KPD+ T++ ++R   
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
            + ++ +A+ L+  M    + P++ A+  ++   C+    T     FD +  +    D+ 
Sbjct: 543 MEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIA 602

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           + N++I    K   I +A + +  LIE ++ P IVT+N++I G+C   ++ +A R+ + +
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662

Query: 405 KLHGLEPSAVTYTTFMNAYCE 425
           K+    P+ VT T  ++  C+
Sbjct: 663 KVTPFGPNTVTLTILIHVLCK 683



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 214/452 (47%), Gaps = 6/452 (1%)

Query: 128 GLHPDAFS-YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           G+ P   S +  ++  L   G + +AL+F   +   G     ++ + + KG  +  QI  
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSV-DQIEV 269

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +++  +L  G  P++VT+  LI G+C+ G ++    L +VM  +G + ++IAYS L+ 
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
              K+G +     L  +    G+K D+V +S  I    K   +  A  +Y  M  + ISP
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N   +  ++ GLC+   I EA   +  ++       +V Y+ +IDG+ K GN+     LY
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG--LEPSAVTYTTFMNAYC 424
             +I+    P +V +  L+ G  K G +  A R   ++K+ G  +  + V + + ++ +C
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF--SVKMLGQSIRLNVVVFNSLIDGWC 507

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
                   L + + M    I P   T+T V++    + +L+EA+ L   M+ +G+ PD +
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y T+I +FCK        QL + M  + +    A  N++I  L     +++A     +L
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            E  +    V Y T+I  +C+   + +A   F
Sbjct: 628 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 188/416 (45%), Gaps = 45/416 (10%)

Query: 178 FHLLSQISGAWKV------IQKLLIKGSDPDIVTYT--VLICGYCQIGNVEEGLKLREVM 229
           + +L+ + G+ +V        KL   G +P  V+    VL   +C+ G V + L    ++
Sbjct: 185 YRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLV 243

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           + +GF++ +++ + +L  +    +I+ A  LL  +   G  P++VT+  LI G CK+ ++
Sbjct: 244 MERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEM 302

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +A  L+  M  + I P                                   D++ Y+ +
Sbjct: 303 DRAFDLFKVMEQRGIEP-----------------------------------DLIAYSTL 327

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           IDGY K G +G   +L+ Q + K +   +V F+S I  + K+G +A A  +   +   G+
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            P+ VTYT  +   C++G I     +  ++  + + P+ VTY+ +I G CK   L+    
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           L EDM  +G  PD + Y  ++    K   +  A +   +M   ++      +N LIDG C
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
                  A  +   +  + I      +TT+++    EG + +A+  F +M + G E
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/408 (23%), Positives = 195/408 (47%), Gaps = 8/408 (1%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           + V+  +  +  D D+  + +  C  C+ G V++ L++       G  +   +   +L+S
Sbjct: 133 FNVLGSIRDRSLDADVCKFLMECC--CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNS 190

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVT-YSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           +  S R+D       ++   G++P  V+ +  ++  L  + +V KA+  +  +  +    
Sbjct: 191 LIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRV 250

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNC--IQDVVLYNIMIDGYVKLGNIGEAVQ 364
              +   +L GL   ++   +R+   SL++ +C    +VV +  +I+G+ K G +  A  
Sbjct: 251 GIVSCNKVLKGLSVDQIEVASRLL--SLVL-DCGPAPNVVTFCTLINGFCKRGEMDRAFD 307

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L++ + ++ I P ++ +++LI G+ K G +    +L       G++   V +++ ++ Y 
Sbjct: 308 LFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYV 367

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G++     + + M  + I P  VTYT++IKGLC+  ++ EA  +   +   G+ P  +
Sbjct: 368 KSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV 427

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           TY+++I  FCKC +LR  F L   M      P    Y +L+DGL   G + +A    V +
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
              +I L  V + ++I   C      +A+  F  M   G +  +  +T
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 109/478 (22%), Positives = 184/478 (38%), Gaps = 111/478 (23%)

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYT-VLICGYCQIGNVEEGLKLREVMLS-QGFKLN 237
           L S+ + A K  +   I G DP   T   VLI    + G  +   K+ + M++ +G   N
Sbjct: 79  LESEPNSALKYFRWAEISGKDPSFYTIAHVLI----RNGMFDVADKVFDEMITNRGKDFN 134

Query: 238 VIAY-----------SVLLSSMCKSGRIDEALGLLYEMEAVGLK-PDLVTYSILIRGLCK 285
           V+               L+   C+ G +D+AL +      +G+  P    Y +L   L  
Sbjct: 135 VLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIG 193

Query: 286 QDKVHKAIQLYNEMCSKRISPNSF-AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
            D+V      ++++C   I P+   AHG +L  L  K                       
Sbjct: 194 SDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK----------------------- 230

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
                       G + +A+  +R ++E+     IV+ N ++ G   + ++  A RLL  +
Sbjct: 231 ------------GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLV 277

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G  P+ VT+ T                                   +I G CK+ ++
Sbjct: 278 LDCGPAPNVVTFCT-----------------------------------LINGFCKRGEM 302

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
             A  L + M   G+ PD I Y+T+I  + K   L    +L +Q     ++     ++  
Sbjct: 303 DRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSST 362

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           ID    +GDL  A  +   +    IS   V YT +IK  C +G +++A   + Q++++G 
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           E SI  Y+                     ++  F + G+L S F L   MIK G  PD
Sbjct: 423 EPSIVTYSS--------------------LIDGFCKCGNLRSGFALYEDMIKMGYPPD 460


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 263/540 (48%), Gaps = 14/540 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y   G  ++A  ++ + K      S+  YN +L  L     + +   + + +K+   P N
Sbjct: 352 YGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAP-N 410

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGL 120
           + + +I+ID LC+   L+ A L +Q++  KE G  P+++++N ++ R CK    + A  +
Sbjct: 411 LTSYNILIDMLCKAGELE-AALKVQDSM-KEAGLFPNIITVNIMIDRLCKAQRLDEACSI 468

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  +      PD+ ++  LI GL   G + +A      M   G  P+A+ Y+ L + F  
Sbjct: 469 FLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFK 528

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +     K+ ++++ +G  PD++     +    + G +E+G  L E + +QG   +V +
Sbjct: 529 CGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRS 588

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS+L+  + K G   +   L YEM+  GL  D   Y+I+I G CK  KV+KA QL  EM 
Sbjct: 589 YSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMK 648

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           +K + P    +G+++ GL + + + EA M F+         +VV+Y+ +IDG+ K+G I 
Sbjct: 649 TKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRID 708

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  +  +L++K ++P+  T+N L+    K  ++ +A      +K     P+ VTY+  +
Sbjct: 709 EAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMV 768

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N  C+     +     QEM+ + + P  +TYT +I GL +   + EA  L E     G  
Sbjct: 769 NGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGI 828

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD   YN +I           A+ L  +  L      S T  +L+D       L  ADCL
Sbjct: 829 PDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDA------LHKADCL 882



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/578 (23%), Positives = 273/578 (47%), Gaps = 4/578 (0%)

Query: 18  VIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           ++ +M+E+  +V++  + +L+         D    L D++K +    ++   ++ ID   
Sbjct: 224 LLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFG 283

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +  ++  A  F  E   +   P  V+  +++   CK    + A  LF  +      P  +
Sbjct: 284 KVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVY 343

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +YN +I G    G   EA        R G  P  I Y+ +        ++  A ++++ +
Sbjct: 344 AYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM 403

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
            +  + P++ +Y +LI   C+ G +E  LK+++ M   G   N+I  ++++  +CK+ R+
Sbjct: 404 KMDAA-PNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRL 462

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           DEA  +   ++     PD VT+  LI GL +  KV+ A  LY +M     +PN+  + ++
Sbjct: 463 DEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSL 522

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           +    +     +    +  ++   C  D++L N  +D   K G I +   L+ ++  + +
Sbjct: 523 IRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGL 582

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
           +P + +++ LI+G  K G   D  +L   +K  GL      Y   ++ +C+ G + +   
Sbjct: 583 TPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQ 642

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           LL+EM+TK + PT VTY  VI GL K  +L EA  L E+     V  + + Y+++I  F 
Sbjct: 643 LLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFG 702

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K   + +A+ +L ++    L P + T+N L+D L    ++  A     +++       +V
Sbjct: 703 KVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEV 762

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            Y+ ++   C     +KA  F+ +M ++G + +   YT
Sbjct: 763 TYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYT 800



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 162/667 (24%), Positives = 289/667 (43%), Gaps = 57/667 (8%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPR 61
           V++R G V  A+ ++ +MK       +  YN        +   D+ W  + ++K      
Sbjct: 246 VFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVP 305

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEV---- 116
           +  T + +I  LC+  R+ +A+   +E    +  P V + N ++  Y  +G F E     
Sbjct: 306 DDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLL 365

Query: 117 ----AKG-----------LFCL--------------MLKYGLHPDAFSYNILIHGLCIAG 147
                KG           L CL               +K    P+  SYNILI  LC AG
Sbjct: 366 ERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAG 425

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            +E AL+  + M   G+ P+ IT +I+        ++  A  +   L  K   PD VT+ 
Sbjct: 426 ELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFC 485

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            LI G  + G V +   L E ML  G   N + Y+ L+ +  K GR ++   +  EM   
Sbjct: 486 SLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHR 545

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  PDL+  +  +  + K  ++ K   L+ E+ ++ ++P+  ++  ++ GL +     + 
Sbjct: 546 GCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDT 605

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
              F  +       D   YNI+IDG+ K G + +A QL  ++  K + P++VT+ S+I G
Sbjct: 606 YKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDG 665

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
             K  ++ +A  L +  K   ++ + V Y++ ++ + + G I     +L+E+  K + P 
Sbjct: 666 LAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 725

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             T+  ++  L K  ++ EA+   ++M  +   P+++TY+ ++   CK +   KAF    
Sbjct: 726 TYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQ 785

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M    L+P + TY  +I GL   G++  A  L    +          Y  +I+      
Sbjct: 786 EMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNAN 845

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
               A   F +   KG  I    Y+K+                C V+L A H+   L   
Sbjct: 846 KAMDAYILFEETRLKGCRI----YSKT----------------CVVLLDALHKADCLEQA 885

Query: 628 FELAAVM 634
             + AV+
Sbjct: 886 AIVGAVL 892



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 157/684 (22%), Positives = 296/684 (43%), Gaps = 57/684 (8%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           +H   +V  K K+L    S + YN+LL      R+ + +  + +++ ++    +  T   
Sbjct: 116 LHYFRWVERKTKQLH---SPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIE 172

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++    +  +L++A   ++     +F P+  +   ++        A+    L   M + G
Sbjct: 173 MVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIG 232

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
                  +  LI      G ++ AL   ++M  +    D + Y++    F  + ++  AW
Sbjct: 233 YEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAW 292

Query: 189 KVIQKLLIKGSDPDIVTYT-----------------------------------VLICGY 213
           K   +L  +G  PD VT+T                                    +I GY
Sbjct: 293 KFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGY 352

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
             +G   E   L E    +G   +VIAY+ +L+ + + G+++EAL +L  M+ +   P+L
Sbjct: 353 GSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNL 411

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            +Y+ILI  LCK  ++  A+++ + M    + PN      ++  LC+ + + EA   F  
Sbjct: 412 TSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLG 471

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L    C  D V +  +IDG  + G + +A  LY ++++   +P+ V + SLI  F K G+
Sbjct: 472 LDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGR 531

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
             D  ++   +   G  P  +    +M+   + G I++  AL +E++ + + P   +Y++
Sbjct: 532 KEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSI 591

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I GL K    ++  +L  +M   G+  D   YN +I  FCK   + KA+QLL +M    
Sbjct: 592 LIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKG 651

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           L+PT  TY  +IDGL     L  A  L    +   + L  V Y+++I      G + +A 
Sbjct: 652 LQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAY 711

Query: 574 TFFCQMVEKGFE-------------ISIRDYTKSFFCM--MLSNGFPPDQEICEVMLIAF 618
               ++++KG               +   +  ++  C   M +   PP++    +M+   
Sbjct: 712 LILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGL 771

Query: 619 HQGGDLGSVFELAAVMIKSGLLPD 642
            +       F     M K GL P+
Sbjct: 772 CKVRKFNKAFVFWQEMQKQGLKPN 795



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/459 (23%), Positives = 195/459 (42%), Gaps = 56/459 (12%)

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++++++ + G  P   T   ++  + +   + E   + E M    F+    AY+ L+ ++
Sbjct: 153 QILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGAL 212

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
             +   D  L LL +M+ +G +  +  ++ LI    ++ +V  A+ L +EM S     NS
Sbjct: 213 SAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKS-----NS 267

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           F                                D+VLYN+ ID + K+G +  A + + +
Sbjct: 268 FN------------------------------ADLVLYNVCIDCFGKVGKVDMAWKFFHE 297

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           L  + + P  VTF S+I   CK  +V +A  L + +  +   P    Y T +  Y   G 
Sbjct: 298 LKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGK 357

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
                +LL+  + K   P+ + Y  ++  L ++ K++EA+++LE M  +   P+  +YN 
Sbjct: 358 FNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNI 416

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I   CK  +L  A ++ + M    L P   T NI+ID LC    L  A  + + L    
Sbjct: 417 LIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKV 476

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ 608
            +   V + ++I      G V+ A   +    EK                ML +G  P+ 
Sbjct: 477 CTPDSVTFCSLIDGLGRHGKVNDAYMLY----EK----------------MLDSGQTPNA 516

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            +   ++  F + G      ++   M+  G  PD  L+N
Sbjct: 517 VVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLN 555


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 243/510 (47%), Gaps = 5/510 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           V+  L   +R  D     +E       PS+V+ N ++  + K G  +    L   M   G
Sbjct: 175 VLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRG 234

Query: 129 LH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
               P+  +YN++I GL   G +EEA E    M R   +  + TY+ L  G      +  
Sbjct: 235 SGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKK 293

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
            + +  ++  +G  P +VTY  +I G  Q G VE        M + G   +VI Y+ LL+
Sbjct: 294 VYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLN 353

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             CK+G + EAL L  ++   GL P ++TY+I I G C+   + +A  L  EM  +   P
Sbjct: 354 GYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLP 413

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N   +  ++ G      +  AR +FD ++      D   YN  I   + LG+I  A++L 
Sbjct: 414 NVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELR 473

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             L+ + IS   VT+N LI+G CK G + DA+ L   +  +GL+P  +TYT  ++A+CE 
Sbjct: 474 EVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCER 533

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G ++    +   M +  + P+ VT+TV+I   C++  L  A      M   GV P++ITY
Sbjct: 534 GLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITY 593

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           N +I + C+    + A    ++M    L     TY +LIDG C  G+ ++A      + +
Sbjct: 594 NVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQ 653

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           + I    + +  ++K    +G VH  + + 
Sbjct: 654 NGIHPDYLTHKALVKGF--DGHVHHTIEYL 681



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 243/505 (48%), Gaps = 20/505 (3%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M  +G+ PD    N ++  L  A   ++      +M + G+EP  +TY+ L   F  
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216

Query: 181 LSQISGAWKVIQKLLIKGSD--PDIVTYTVLICGYCQIGNVEEGLKLREVM-LSQGFKLN 237
             +      +++++  +GS   P+ VTY V+I G  + G++EE  +L E M LS+  K +
Sbjct: 217 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK--KAS 274

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              Y+ L++ +   G + +   L  EME  G+ P +VTY+ +I GL +   V  A   + 
Sbjct: 275 SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 334

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM +  + P+   + ++L G C+   + EA + F  L  +     V+ YNI IDGY +LG
Sbjct: 335 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLG 394

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           ++ EA  L  ++ E+   P++ T+  L+ G      +A AR   D +   GL+P    Y 
Sbjct: 395 DLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYN 454

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T + A    G+I R L L + +  + I    VTY ++I GLCK   L++A +L   M   
Sbjct: 455 TRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSN 514

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD ITY  +I + C+   LR+A ++ N M    L P++ T+ ++I   C  G+L +A
Sbjct: 515 GLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSA 574

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT----- 592
                 + E  +   ++ Y  +I A C  G    A   F +M+E+G   +   YT     
Sbjct: 575 YGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDG 634

Query: 593 ----------KSFFCMMLSNGFPPD 607
                       F+  M  NG  PD
Sbjct: 635 NCKVGNWEDAMRFYFEMHQNGIHPD 659



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 221/455 (48%), Gaps = 39/455 (8%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYD---DIKVSETPRNV 63
           +R G + +A  ++  M+ L  K S  TYN L+  L     +  +YD   +++       V
Sbjct: 252 TRKGDLEEAAELVEGMR-LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTV 310

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T + +I GL Q   ++ A +   E       P V++ N++++ YCK G  + A  LF  
Sbjct: 311 VTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGD 370

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           + + GL P   +YNI I G C  G +EEA     +MG  G  P+  TY+IL KG   +  
Sbjct: 371 LRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCS 430

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           ++ A +   ++L KG  PD   Y   IC    +G++   L+LREV++ +G   + + Y++
Sbjct: 431 LAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNI 490

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+  +CK+G + +A  L  +M + GL+PD +TY+ LI   C++  + +A +++N M S  
Sbjct: 491 LIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDG 550

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P++                                   V + ++I  Y + GN+  A 
Sbjct: 551 LLPSA-----------------------------------VTFTVIIHAYCRRGNLYSAY 575

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
             +R+++E+ + P+ +T+N LI+  C+ G+   A      +   GL  +  TYT  ++  
Sbjct: 576 GWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGN 635

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           C+ GN +  +    EM    I P ++T+  ++KG 
Sbjct: 636 CKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 214/428 (50%), Gaps = 29/428 (6%)

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME--AVGLKPDLVTYSILIRG 282
           + E ML  G + +++ Y+ LL S  K GR D+   LL EME    G  P+ VTY+++I G
Sbjct: 191 VHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITG 250

Query: 283 LCKQDKVHKAIQLYNEM-CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN--C 339
           L ++  + +A +L   M  SK+ S  SF +  ++ GL  +  +   ++Y   L M N   
Sbjct: 251 LTRKGDLEEAAELVEGMRLSKKAS--SFTYNPLITGLLARGCVK--KVYDLQLEMENEGI 306

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           +  VV YN MI G ++ G +  A   + ++    + P ++T+NSL+ G+CK G + +A  
Sbjct: 307 MPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALL 366

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           L   ++  GL P+ +TY   ++ YC  G+++    L +EM  +   P   TYT+++KG  
Sbjct: 367 LFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSL 426

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
               L  A +  ++M   G+ PD   YNT I +     D+ +A +L   + L  +   + 
Sbjct: 427 NVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTV 486

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           TYNILI GLC  G+LK+A  L + +  + +    + YT +I AHC  G + +A       
Sbjct: 487 TYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREA------- 539

Query: 580 VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                        +  F  M+S+G  P      V++ A+ + G+L S +     M++ G+
Sbjct: 540 -------------RKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGV 586

Query: 640 LPDKFLIN 647
            P++   N
Sbjct: 587 EPNEITYN 594



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 168/368 (45%), Gaps = 20/368 (5%)

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           +  + EM S  ++P+      +L  L +     +     + ++       +V YN ++D 
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 353 YVKLGNIGEAVQLYRQLIEKRIS---PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           ++K G   +   L +++ E R S   P+ VT+N +I G  + G + +A  L++ ++L   
Sbjct: 214 FLKEGRKDKVAMLLKEM-ETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK- 271

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           + S+ TY   +      G ++++  L  EME + I PT VTY  +I GL +   ++ A  
Sbjct: 272 KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQV 331

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
              +M  +G+ PD ITYN+++  +CK  +L++A  L   +    L PT  TYNI IDG C
Sbjct: 332 KFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYC 391

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             GDL+ A  L   + E         YT ++K       +  A  FF +M+ KG +    
Sbjct: 392 RLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCF 451

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVML------------IAFH---QGGDLGSVFELAAVM 634
            Y       ++        E+ EV++            I  H   + G+L    EL   M
Sbjct: 452 AYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKM 511

Query: 635 IKSGLLPD 642
           + +GL PD
Sbjct: 512 VSNGLQPD 519


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 244/519 (47%), Gaps = 19/519 (3%)

Query: 36  SLLYNLR-HTD-IMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKE 93
           SLL  L  H D  M+D   D + +  P +    + ++       R  DA+         +
Sbjct: 108 SLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQ 167

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
             P+    N I+      G   +A  L+  M+  G  P+  +YN+L+ GLC  G   +AL
Sbjct: 168 SRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDAL 227

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           +  ++M   G+ P+   Y++L        +I  A +++  +  KG  PD VTY   + G 
Sbjct: 228 KMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287

Query: 214 CQIGNVEEGLKLREVMLSQG-FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           C++G V E  + R VML  G F L +  YS L+  + ++ R DE  G    M    + PD
Sbjct: 288 CKVGRVNEAFQ-RLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPD 346

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +V Y+I+IRG  +  ++  A+   + M  K   P++F +  +L  LC+   +  A     
Sbjct: 347 VVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRS 406

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            ++ +N + D     IMI G  K G + EA+Q++ ++ E    P+++T+N+LI GF + G
Sbjct: 407 EMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG 466

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTT--------------FMNAYCEEGNIQRLLALLQE 438
           ++ +AR L   +++ G  PS     T               ++  C+ G + +   LL+ 
Sbjct: 467 RLEEARMLFHKMEM-GNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRS 525

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           +    + P  VTY  +I GLCK   L  AV+L +++ + G++PD+ITY T+I    +   
Sbjct: 526 IIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHR 585

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
              A  L   +      P+ + YN ++  LC    L  A
Sbjct: 586 ENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQA 624



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 151/604 (25%), Positives = 266/604 (44%), Gaps = 19/604 (3%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSE 58
           L   +S  G   DAV   ++M E   + +   YN++L  L  + ++     LY+ +  + 
Sbjct: 143 LVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAG 202

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              N  T ++++DGLC+Q    DA+    E   +   P+V     ++S  C  G  + A 
Sbjct: 203 CAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAV 262

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M   G  PD  +YN  + GLC  G + EA +    +   G       YS L  G 
Sbjct: 263 QLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGL 322

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               +    +   + +L +   PD+V YT++I G  + G +E+ L   +VM  +GF  + 
Sbjct: 323 FQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDT 382

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+ +L  +C  G ++ A  L  EM    L  D  T +I+I GLCK+  V +A+Q+++E
Sbjct: 383 FCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDE 442

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM-------------SNCIQDVVL 345
           M      P    + A++ G   +  + EARM F  + M             +N + D   
Sbjct: 443 MGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSES 502

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
              ++    + G + +A +L R +I+  + P +VT+N+LI G CK   +  A RL   ++
Sbjct: 503 LRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQ 562

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           L G+ P  +TY T ++           + L Q +      P+   Y  +++ LC+  KL 
Sbjct: 563 LKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLS 622

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD--LRKAFQLLNQMWLHNLEPTSATYNI 523
           +A+ L  D Y+       +    +  +  + +D  L    + L ++       +S  Y I
Sbjct: 623 QAINLWLD-YLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTI 681

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            + GLC      +A  +  +LQE  I +T      +I   C + +++ A+      + K 
Sbjct: 682 WLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKS 741

Query: 584 FEIS 587
             +S
Sbjct: 742 IILS 745



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 194/448 (43%), Gaps = 60/448 (13%)

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
           S P    Y  ++      G +   L L   M++ G   N   Y+VL+  +CK G   +AL
Sbjct: 168 SRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDAL 227

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +  EM   G+ P++  Y++L+  LC   K+ +A+QL   M  K   P+   + A L GL
Sbjct: 228 KMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287

Query: 319 CEKEMITEARMYFDSLIMSNCIQD------VVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           C+   + EA   F  L+M   +QD      +  Y+ +IDG  +     E    Y+ ++E+
Sbjct: 288 CKVGRVNEA---FQRLVM---LQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLER 341

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            ISP +V +  +I G  + G++ DA   LD +K  G  P    Y T +   C+ G+++R 
Sbjct: 342 NISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERA 401

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             L  EM    +     T T++I GLCK+  + EA+Q+ ++M   G  P  +TYN +I  
Sbjct: 402 HTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDG 461

Query: 493 F-----------------------------------CKCKDLRK-------------AFQ 504
           F                                   C  + LRK             A++
Sbjct: 462 FYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYK 521

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           LL  +    + P   TYN LI+GLC   +L  A  L   LQ   IS  ++ Y T+I    
Sbjct: 522 LLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLL 581

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYT 592
                + AM  F  +++ G   S+  Y 
Sbjct: 582 RAHRENDAMMLFQNILQSGSSPSLSIYN 609



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 193/417 (46%), Gaps = 7/417 (1%)

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           + G   +  A++ L+++   +GR  +A+     M+    +P    Y+ +++ L     + 
Sbjct: 130 AAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVIL 189

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A+ LYN M +   +PN   +  ++ GLC++ M  +A   FD ++    + +V +Y +++
Sbjct: 190 LALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLL 249

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
                 G I EAVQL   + +K   P  VT+N+ + G CK G+V +A + L  ++  G  
Sbjct: 250 SSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFA 309

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
                Y+  ++   +           + M  + I P  V YT++I+G  +  ++++A+  
Sbjct: 310 LGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSF 369

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L+ M   G  PD   YNT+++  C   DL +A  L ++M  +NL   S T  I+I GLC 
Sbjct: 370 LDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCK 429

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            G +  A  +   + EH    T + Y  +I     EG + +A   F +M E G   S+  
Sbjct: 430 RGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSL-- 486

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               F  + L      D E    ++    Q G +   ++L   +I SG++PD    N
Sbjct: 487 ----FLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYN 539



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 233/514 (45%), Gaps = 61/514 (11%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
           + G V++A   +  +++    + ++ Y+ L   L+  R  D  +  Y  +       +V 
Sbjct: 289 KVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVV 348

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             +I+I G  +  R++DA+ FL     K F P     N ++   C  G  E A  L   M
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L+  L  D+ +  I+I GLC  G ++EA++  ++MG HG +P  +TY+ L  GF+   ++
Sbjct: 409 LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRL 468

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +  K+ + G++P +  +  L  G  Q+ + E    LR+                L
Sbjct: 469 EEARMLFHKMEM-GNNPSL--FLRLTLGANQVCDSES---LRK----------------L 506

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  MC+SG++ +A  LL  +   G+ PD+VTY+ LI GLCK   +  A++L+ E+  K I
Sbjct: 507 VHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGI 566

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SP+   +G ++ GL       +A M F +++ S     + +YN M+    ++  + +A+ 
Sbjct: 567 SPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAIN 626

Query: 365 LY---------------------------------RQLIEKRISPSIVTFNS---LIYGF 388
           L+                                 R+LI+       ++ N     + G 
Sbjct: 627 LWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGL 686

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C+  +  DA R+  T++  G++ +       +N  C + N+   + ++    +K+I  + 
Sbjct: 687 CQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQ 746

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
                +++ LC  ++ Q+A  L   M+++G   D
Sbjct: 747 PVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMD 780


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 244/519 (47%), Gaps = 19/519 (3%)

Query: 36  SLLYNLR-HTD-IMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKE 93
           SLL  L  H D  M+D   D + +  P +    + ++       R  DA+         +
Sbjct: 108 SLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQ 167

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
             P+    N I+      G   +A  L+  M+  G  P+  +YN+L+ GLC  G   +AL
Sbjct: 168 SRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDAL 227

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           +  ++M   G+ P+   Y++L        +I  A +++  +  KG  PD VTY   + G 
Sbjct: 228 KMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287

Query: 214 CQIGNVEEGLKLREVMLSQG-FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           C++G V E  + R VML  G F L +  YS L+  + ++ R DE  G    M    + PD
Sbjct: 288 CKVGRVNEAFQ-RLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPD 346

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +V Y+I+IRG  +  ++  A+   + M  K   P++F +  +L  LC+   +  A     
Sbjct: 347 VVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRS 406

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            ++ +N + D     IMI G  K G + EA+Q++ ++ E    P+++T+N+LI GF + G
Sbjct: 407 EMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG 466

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTT--------------FMNAYCEEGNIQRLLALLQE 438
           ++ +AR L   +++ G  PS     T               ++  C+ G + +   LL+ 
Sbjct: 467 RLEEARMLFHKMEM-GNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRS 525

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           +    + P  VTY  +I GLCK   L  AV+L +++ + G++PD+ITY T+I    +   
Sbjct: 526 IIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHR 585

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
              A  L   +      P+ + YN ++  LC    L  A
Sbjct: 586 ENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQA 624



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 151/604 (25%), Positives = 267/604 (44%), Gaps = 19/604 (3%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSE 58
           L   +S  G   DAV   ++M E   + +   YN++L  L  + ++     LY+ +  + 
Sbjct: 143 LVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAG 202

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              N  T ++++DGLC+Q    DA+    E   +   P+V     ++S  C  G  + A 
Sbjct: 203 CAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAV 262

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M   G  PD  +YN  + GLC  G + EA +    +   G       YS L  G 
Sbjct: 263 QLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGL 322

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               +    +   + +L +   PD+V YT++I G  + G +E+ L   +VM  +GF  + 
Sbjct: 323 FQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDT 382

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+ +L  +C  G ++ A  L  EM    L  D  T +I+I GLCK+  V +A+Q+++E
Sbjct: 383 FCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDE 442

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM-------------SNCIQDVVL 345
           M      P    + A++ G   +  + EARM F  + M             +N ++D   
Sbjct: 443 MGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSES 502

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
              ++    + G + +A +L R +I+  + P +VT+N+LI G CK   +  A RL   ++
Sbjct: 503 LRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQ 562

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           L G+ P  +TY T ++           + L Q +      P+   Y  +++ LC+  KL 
Sbjct: 563 LKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLS 622

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD--LRKAFQLLNQMWLHNLEPTSATYNI 523
           +A+ L  D Y+       +    +  +  + +D  L    + L ++       +S  Y I
Sbjct: 623 QAINLWLD-YLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTI 681

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            + GLC      +A  +  +LQE  I +T      +I   C + +++ A+      + K 
Sbjct: 682 WLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKS 741

Query: 584 FEIS 587
             +S
Sbjct: 742 IILS 745



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/516 (24%), Positives = 234/516 (45%), Gaps = 13/516 (2%)

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
           L +        S  +  A+++ +   G    A   F  M ++   P AF YN ++  L  
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
           +G +  AL   N M   G  P+  TY++L  G         A K+  ++L +G  P++  
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKI 244

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           YTVL+   C  G ++E ++L   M  +G   + + Y+  LS +CK GR++EA   L  ++
Sbjct: 245 YTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
             G    L  YS LI GL +  +  +    Y  M  + ISP+   +  ++ G  E   I 
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +A  + D +     + D   YN ++      G++  A  L  ++++  +     T   +I
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK--- 442
            G CK G V +A ++ D +  HG +P+ +TY   ++ +  EG ++    L  +ME     
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNP 484

Query: 443 ------AIGPTHV----TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
                  +G   V    +   ++  +C+  ++ +A +LL  +   GV PD +TYNT+I  
Sbjct: 485 SLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLING 544

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            CK ++L  A +L  ++ L  + P   TY  LIDGL       +A  L  ++ +   S +
Sbjct: 545 LCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPS 604

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
              Y +++++ C    + +A+  +   + K +   +
Sbjct: 605 LSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPV 640



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 193/448 (43%), Gaps = 60/448 (13%)

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
           S P    Y  ++      G +   L L   M++ G   N   Y+VL+  +CK G   +AL
Sbjct: 168 SRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDAL 227

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +  EM   G+ P++  Y++L+  LC   K+ +A+QL   M  K   P+   + A L GL
Sbjct: 228 KMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287

Query: 319 CEKEMITEARMYFDSLIMSNCIQD------VVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           C+   + EA   F  L+M   +QD      +  Y+ +IDG  +     E    Y+ ++E+
Sbjct: 288 CKVGRVNEA---FQRLVM---LQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLER 341

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            ISP +V +  +I G  + G++ DA   LD +K  G  P    Y T +   C+ G+++R 
Sbjct: 342 NISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERA 401

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             L  EM    +     T T++I GLCK+  + EA+Q+ ++M   G  P  +TYN +I  
Sbjct: 402 HTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDG 461

Query: 493 F------------------------------------------------CKCKDLRKAFQ 504
           F                                                C+   + KA++
Sbjct: 462 FYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYK 521

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           LL  +    + P   TYN LI+GLC   +L  A  L   LQ   IS  ++ Y T+I    
Sbjct: 522 LLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLL 581

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYT 592
                + AM  F  +++ G   S+  Y 
Sbjct: 582 RAHRENDAMMLFQNILQSGSSPSLSIYN 609



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 193/417 (46%), Gaps = 7/417 (1%)

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           + G   +  A++ L+++   +GR  +A+     M+    +P    Y+ +++ L     + 
Sbjct: 130 AAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVIL 189

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A+ LYN M +   +PN   +  ++ GLC++ M  +A   FD ++    + +V +Y +++
Sbjct: 190 LALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLL 249

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
                 G I EAVQL   + +K   P  VT+N+ + G CK G+V +A + L  ++  G  
Sbjct: 250 SSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFA 309

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
                Y+  ++   +           + M  + I P  V YT++I+G  +  ++++A+  
Sbjct: 310 LGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSF 369

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L+ M   G  PD   YNT+++  C   DL +A  L ++M  +NL   S T  I+I GLC 
Sbjct: 370 LDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCK 429

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            G +  A  +   + EH    T + Y  +I     EG + +A   F +M E G   S+  
Sbjct: 430 RGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSL-- 486

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               F  + L      D E    ++    Q G +   ++L   +I SG++PD    N
Sbjct: 487 ----FLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYN 539



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 121/514 (23%), Positives = 231/514 (44%), Gaps = 61/514 (11%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
           + G V++A   +  +++    + ++ Y+ L   L+  R  D  +  Y  +       +V 
Sbjct: 289 KVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVV 348

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             +I+I G  +  R++DA+ FL     K F P     N ++   C  G  E A  L   M
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L+  L  D+ +  I+I GLC  G ++EA++  ++MG HG +P  +TY+ L  GF+   ++
Sbjct: 409 LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRL 468

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +  K+ + G++P +  +  L  G  Q+ + E    LR+                L
Sbjct: 469 EEARMLFHKMEM-GNNPSL--FLRLTLGANQVRDSES---LRK----------------L 506

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  MC+SG++ +A  LL  +   G+ PD+VTY+ LI GLCK   +  A++L+ E+  K I
Sbjct: 507 VHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGI 566

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SP+   +G ++ GL       +A M F +++ S     + +YN M+    ++  + +A+ 
Sbjct: 567 SPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAIN 626

Query: 365 LYRQLIEKRI------------------------------------SPSIVTFNSLIYGF 388
           L+   + K+                                     S S   +   + G 
Sbjct: 627 LWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGL 686

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C+  +  DA R+  T++  G++ +       +N  C + N+   + ++    +K+I  + 
Sbjct: 687 CQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQ 746

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
                +++ LC  ++ Q+A  L   M+++G   D
Sbjct: 747 PVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMD 780


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 157/544 (28%), Positives = 251/544 (46%), Gaps = 47/544 (8%)

Query: 5   VYSRTGMVH--------DAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDD 53
            YS  G++H        +A+ V  +M    +K S++TY++L+  L R  D   + +L ++
Sbjct: 201 AYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEE 260

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K      N+YT +I I  L +  R+ DA                               
Sbjct: 261 MKSIGLRPNIYTYTICIRALGRARRIDDAW------------------------------ 290

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
                G+F  M   G  PD  +Y +LI  LC AG +++A E    M      PD +TY  
Sbjct: 291 -----GIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYIT 345

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L   F  +  +    +   ++ + G  PD+VTYT+LI   C+ G+V+    + +VM ++G
Sbjct: 346 LMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKG 405

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              N+  Y+ ++  + K+ R+DEAL LL  ME++G+KP   +Y + I    K     KAI
Sbjct: 406 IFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAI 465

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
             +  M  + I P+  A  A L  L E   I+EA   F+ L       D V YN+++  Y
Sbjct: 466 DTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCY 525

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K G I +A QL  ++I K   P ++  NSLI    K G+V  A ++   +K   L P+ 
Sbjct: 526 SKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTV 585

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTY   +    +EG I + L L   M      P  +T+  ++  L K   +  A+++   
Sbjct: 586 VTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCR 645

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M ++   PD +TYNTII    +   +  AF   +QM    L P   T   LI G+  +G 
Sbjct: 646 MTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGR 704

Query: 534 LKNA 537
           +++A
Sbjct: 705 VEDA 708



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/610 (23%), Positives = 284/610 (46%), Gaps = 12/610 (1%)

Query: 1    MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVS 57
            ML   YS+ G +  A  ++++M     +  +   NSL   LY     D  W ++  +K  
Sbjct: 520  MLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNL 579

Query: 58   ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            +    V T +I++ GL ++ ++  A+            P+ ++ N+++    K    ++A
Sbjct: 580  KLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLA 639

Query: 118  KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              +FC M     +PD  +YN +I+GL   G ++ A  F + M +  + PD +T   L  G
Sbjct: 640  LKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPG 698

Query: 178  FHLLSQISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
                 ++  A KV+ + + +     +   +  L+        +EE +   E+++      
Sbjct: 699  VVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQ 758

Query: 237  NVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            +      L+  +CK  +  +A  +  +  + +G+ P L +Y+ L+ GL   +   KA++L
Sbjct: 759  DDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALEL 818

Query: 296  YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
            + +M S    PN+F +  +L    + + I +    +  +    C  + + +NI+I   VK
Sbjct: 819  FEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVK 878

Query: 356  LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
              N+ +A+ LY +L+    SP+  T+  LI G  K G+   A ++ + +  +G  P++V 
Sbjct: 879  SNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVI 938

Query: 416  YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
            Y   +N + + G I     L ++M  + I P   +YT++++ LC   ++ EAVQ  E++ 
Sbjct: 939  YNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELK 998

Query: 476  VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            + G+ PD ++YN II    K + L +A  L ++M    + P   TYN LI  L + G + 
Sbjct: 999  LTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVD 1058

Query: 536  NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF 595
             A  +   LQ   +  +   Y  +I+ H   G+  +A + F +M+  G   +   + +  
Sbjct: 1059 VAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQ-- 1116

Query: 596  FCMMLSNGFP 605
                L N +P
Sbjct: 1117 ----LPNKYP 1122



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 139/543 (25%), Positives = 245/543 (45%), Gaps = 1/543 (0%)

Query: 37  LLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGP 96
           +L   R  + M  ++D ++     RN+ T   +   L  +  +  A   L++     F  
Sbjct: 140 ILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFIL 199

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           +  S N ++      GF   A  ++  M+  G+ P   +Y+ L+  L   G   + +   
Sbjct: 200 NAYSYNGLIHLLLP-GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLL 258

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
            +M   G+ P+  TY+I  +      +I  AW + +++  +G  PD++TYTVLI   C  
Sbjct: 259 EEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAA 318

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G +++  +L   M +     + + Y  L+    K G ++       EME  G  PD+VTY
Sbjct: 319 GKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTY 378

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +ILI  LCK   V +A  + + M +K I PN   +  ++ GL +   + EA    +++  
Sbjct: 379 TILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMES 438

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                    Y + ID Y K G+  +A+  +  + ++ I PSI   N+ +Y   + G++++
Sbjct: 439 LGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISE 498

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  + + +   GL P +VTY   M  Y + G I +   LL EM +K   P  +    +I 
Sbjct: 499 AEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLIN 558

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
            L K  ++  A ++   +  + + P  +TYN ++    K   + KA +L   M      P
Sbjct: 559 TLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPP 618

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            + T+N L+D L  N  +  A  +   +   N +   + Y TII     EG +  A  FF
Sbjct: 619 NTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFF 678

Query: 577 CQM 579
            QM
Sbjct: 679 HQM 681



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 185/799 (23%), Positives = 316/799 (39%), Gaps = 159/799 (19%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
            R G     + ++ +MK + L+ +I TY   +  L   R  D  W ++ ++       +V 
Sbjct: 247  RRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVI 306

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T +++ID LC   +L  A     +       P  V+   +M ++ K+G  E  K  +  M
Sbjct: 307  TYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEM 366

Query: 125  LKYGLHPDAFSYNILIHGLCIAGS-----------------------------------M 149
               G  PD  +Y ILI  LC +G                                    +
Sbjct: 367  EVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRL 426

Query: 150  EEALEFTNDMGRHGVEPDAITY------------------------------SILAKGFH 179
            +EALE   +M   GV+P A +Y                              SI A    
Sbjct: 427  DEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNAS 486

Query: 180  LLS-----QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
            L +     +IS A  +   L   G  PD VTY +L+  Y + G +++  +L   M+S+G 
Sbjct: 487  LYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGC 546

Query: 235  KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
            + +V+  + L++++ K+GR+D A  +   ++ + L P +VTY+IL+ GL K+ K+ KA++
Sbjct: 547  EPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALE 606

Query: 295  LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI------ 348
            L+  M      PN+    ++L  L + + +  A   F  + M NC  DV+ YN       
Sbjct: 607  LFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLI 666

Query: 349  ----------------------------MIDGYVKLGNIGEAV----------------Q 364
                                        +I G V+ G + +A+                Q
Sbjct: 667  REGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQ 726

Query: 365  LYRQL---------IEKRIS-PSIVTFNS----------LIYGFCKNGKVADARRLLDTI 404
             + +L         IE+ IS   I+  NS          LI   CK  K  DA+ + D  
Sbjct: 727  FWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKF 786

Query: 405  -KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
             K  G+ P+  +Y   M+        ++ L L ++M++    P + TY +++    K  +
Sbjct: 787  TKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKR 846

Query: 464  LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
            + +   L  +M   G  P+ IT+N II +  K  +L KA  L  ++   +  PT  TY  
Sbjct: 847  INKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGP 906

Query: 524  LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            LIDGL   G  + A  +   + ++      V Y  +I      G++  A   F +MV++G
Sbjct: 907  LIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEG 966

Query: 584  FEISIRDYTKSFFCMMLS---------------NGFPPDQEICEVMLIAFHQGGDLGSVF 628
                ++ YT    C+ ++                G  PD      ++    +   L    
Sbjct: 967  IRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEAL 1026

Query: 629  ELAAVMIKSGLLPDKFLIN 647
             L + M   G+ PD +  N
Sbjct: 1027 SLFSEMKNRGISPDLYTYN 1045



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 241/498 (48%), Gaps = 40/498 (8%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F LM K  ++ +  +Y  +   L I G +  A      M   G   +A +Y+ L    H
Sbjct: 153 VFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGL---IH 209

Query: 180 LL--SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           LL     + A KV ++++ +G  P + TY+ L+    + G+  + + L E M S G + N
Sbjct: 210 LLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPN 269

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +  Y++ + ++ ++ RID+A G+  EM+  G  PD++TY++LI  LC   K+ KA +LY 
Sbjct: 270 IYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYV 329

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M +   SP+   +  ++    +   +   + +++ + +     DVV Y I+I+   K G
Sbjct: 330 KMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSG 389

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           ++  A  +   +  K I P++ T+N++I G  K  ++ +A  LL+ ++  G++P+A +Y 
Sbjct: 390 DVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYV 449

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
            F++ Y + G+  + +   + M+ + I P+       +  L +  ++ EA  +  D++  
Sbjct: 450 LFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKC 509

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM---------------------------- 509
           G++PD +TYN +++ + K   + KA QLL++M                            
Sbjct: 510 GLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAA 569

Query: 510 W-----LHNLE--PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
           W     L NL+  PT  TYNIL+ GL   G +  A  L  S+ E       + + +++  
Sbjct: 570 WKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDC 629

Query: 563 HCAEGDVHKAMTFFCQMV 580
                 V  A+  FC+M 
Sbjct: 630 LSKNDAVDLALKMFCRMT 647



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 191/434 (44%), Gaps = 16/434 (3%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   GF LN  +Y+ L+  +   G  +EAL +   M + G+KP + TYS L+  L ++  
Sbjct: 192 MTEVGFILNAYSYNGLIHLLL-PGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGD 250

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
             K + L  EM S  + PN + +   +  L     I +A   F  +    C  DV+ Y +
Sbjct: 251 TRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTV 310

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +ID     G + +A +LY ++     SP  VT+ +L+  F K G +   +R  + +++ G
Sbjct: 311 LIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDG 370

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
             P  VTYT  + A C+ G++ R   +L  M TK I P   TY  +I GL K  +L EA+
Sbjct: 371 YAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEAL 430

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +LLE+M  +GV P   +Y   I  + K  D  KA      M    + P+ A  N  +  L
Sbjct: 431 ELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTL 490

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
              G +  A+ +   L +  +S   V Y  ++K +   G + KA     +M+ KG E  +
Sbjct: 491 AETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDV 550

Query: 589 R---------------DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
                           D     F  + +    P      ++L    + G +    EL   
Sbjct: 551 MIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGS 610

Query: 634 MIKSGLLPDKFLIN 647
           M +SG  P+    N
Sbjct: 611 MTESGCPPNTITFN 624



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 176/360 (48%), Gaps = 1/360 (0%)

Query: 69   VIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
            +I  LC++ +  DA  +F + T      P++ S N +M       F E A  LF  M   
Sbjct: 766  LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825

Query: 128  GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
            G HP+ F+YN+L+     +  + +  +  ++M   G EP+AIT++I+       + ++ A
Sbjct: 826  GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885

Query: 188  WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
              +  +L+     P   TY  LI G  + G  E+ +K+ E ML  G   N + Y++L++ 
Sbjct: 886  LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945

Query: 248  MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
              KSG ID A  L  +M   G++PDL +Y+IL+  LC   ++ +A+Q + E+    + P+
Sbjct: 946  FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPD 1005

Query: 308  SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
            + ++  I+ GL +   + EA   F  +       D+  YN +I      G +  AV++Y 
Sbjct: 1006 TVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYE 1065

Query: 368  QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            +L    + PS+ T+N+LI G   +G    A  +   + + G  P+  T+    N Y   G
Sbjct: 1066 ELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 167/326 (51%)

Query: 69   VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
            ++DGL   +  + A+   ++       P+  + N ++  + K         L+  M   G
Sbjct: 802  LMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRG 861

Query: 129  LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
              P+A ++NI+I  L  + ++ +AL+   ++      P   TY  L  G     +   A 
Sbjct: 862  CEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAM 921

Query: 189  KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            K+ +++L  G  P+ V Y +LI G+ + G ++   +L + M+ +G + ++ +Y++L+  +
Sbjct: 922  KIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECL 981

Query: 249  CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
            C +GRIDEA+    E++  GL PD V+Y+ +I GL K  ++ +A+ L++EM ++ ISP+ 
Sbjct: 982  CITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDL 1041

Query: 309  FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
            + + A++L L     +  A   ++ L +      V  YN +I G+   GN  +A  ++++
Sbjct: 1042 YTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKK 1101

Query: 369  LIEKRISPSIVTFNSLIYGFCKNGKV 394
            ++    SP+  TF  L   + + G V
Sbjct: 1102 MMVVGCSPNTETFAQLPNKYPRAGLV 1127



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 120/242 (49%)

Query: 49   DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
            DLY ++   +      T   +IDGL +  R + A+   +E      GP+ V  N +++ +
Sbjct: 887  DLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGF 946

Query: 109  CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
             K G  + A  LF  M+K G+ PD  SY IL+  LCI G ++EA+++  ++   G++PD 
Sbjct: 947  GKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDT 1006

Query: 169  ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
            ++Y+ +  G     ++  A  +  ++  +G  PD+ TY  LI      G V+  +K+ E 
Sbjct: 1007 VSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEE 1066

Query: 229  MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
            +   G + +V  Y+ L+     SG  D+A  +  +M  VG  P+  T++ L     +   
Sbjct: 1067 LQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGL 1126

Query: 289  VH 290
            VH
Sbjct: 1127 VH 1128


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 229/456 (50%), Gaps = 27/456 (5%)

Query: 135 SYNILIHGLCIAGSMEEALE-----------------FTNDMGRHGVEPDAITYSILAKG 177
           SY  + H LC    + EA                   FT+ +   G     + +S+L   
Sbjct: 105 SYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNA 164

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC-----QIGNVEEGLKLREVMLSQ 232
           +      S A +  +  L++  +  I  ++   CGY      ++          E +L  
Sbjct: 165 YTDSGYFSDAIQCFR--LVRKHNLQIPFHS---CGYLFDRLMKLNLTSPAWAFYEEILDC 219

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G+  +V  ++VL+  +CK  +I+EA  L  E+   GL+P +V+++ LI G CK   + + 
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            +L   M   R+ P+ F +  ++ GLC++  + +A   F  +     + + V +  +I+G
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           +   G     +++Y+Q++ K + P ++T+N+LI G CK G + +A++L+  +   GL+P 
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             TYT  ++  C+EG+++  L + +EM  + I   +V +T +I G C++ ++ EA + L 
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +M   G+ PD  TY  +I  FCK  D++  F+LL +M      P   TYN+L++GLC  G
Sbjct: 460 EMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
            +KNA+ LL ++    +    + Y  +++ HC  G+
Sbjct: 520 QMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGN 555



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 210/429 (48%), Gaps = 35/429 (8%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S++++         DAI   +            S   +  R  KL     A   +  +L 
Sbjct: 159 SVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILD 218

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD   +N+L+H LC    + EA     ++G+ G+ P                    
Sbjct: 219 CGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPT------------------- 259

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
                           +V++  LI GYC+ GN+++G +L+  M+      +V  YSVL++
Sbjct: 260 ----------------VVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLIN 303

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CK G++D+A  L  EM   GL P+ VT++ LI G C   +    +++Y +M  K + P
Sbjct: 304 GLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKP 363

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +  ++ GLC+   + EA+     +       D   Y ++IDG  K G++  A+++ 
Sbjct: 364 DVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIR 423

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           ++++++ I    V F +LI GFC+ G+V +A R L  +   G++P   TYT  ++ +C++
Sbjct: 424 KEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKK 483

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G+++    LL+EM+     P  VTY V++ GLCKQ +++ A  LL+ M  +GV PD ITY
Sbjct: 484 GDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITY 543

Query: 487 NTIIRSFCK 495
           N ++   CK
Sbjct: 544 NILLEGHCK 552



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 206/398 (51%), Gaps = 3/398 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           + D L + +    A  F +E     + P V   N +M R CK      A+ LF  + K G
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           L P   S+N LI+G C +G++++       M  + V PD  TYS+L  G     Q+  A 
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           K+  ++  +G  P+ VT+T LI G+C  G  + G+++ + ML +G K +VI Y+ L++ +
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK G + EA  L+ EM   GLKPD  TY++LI G CK+  +  A+++  EM  + I  ++
Sbjct: 376 CKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDN 435

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
            A  A++ G C +  + EA      ++ +    D   Y ++I G+ K G++    +L ++
Sbjct: 436 VAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +      P +VT+N L+ G CK G++ +A  LLD +   G+ P  +TY   +  +C+ GN
Sbjct: 496 MQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGN 555

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            +    L  E   K +   + +YT +I  L K  K ++
Sbjct: 556 REDFDKLQSE---KGLVQDYGSYTSLIGDLRKTCKERQ 590



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 219/445 (49%), Gaps = 9/445 (2%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G H     +++L++    +G   +A++    + +H ++    +   L      L+  S A
Sbjct: 150 GTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPA 209

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W   +++L  G  PD+  + VL+   C+   + E   L   +  +G +  V++++ L++ 
Sbjct: 210 WAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLING 269

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            CKSG +D+   L   M    + PD+ TYS+LI GLCK+ ++  A +L+ EMC + + PN
Sbjct: 270 YCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPN 329

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
                 ++ G C           +  ++      DV+ YN +I+G  K+G++ EA +L  
Sbjct: 330 DVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVI 389

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++ ++ + P   T+  LI G CK G +  A  +   +   G+E   V +T  ++ +C EG
Sbjct: 390 EMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREG 449

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            +      L+EM    I P   TYT+VI G CK+  ++   +LL++M   G  P  +TYN
Sbjct: 450 QVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYN 509

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++   CK   ++ A  LL+ M    + P   TYNIL++G C +G+ ++ D L     E 
Sbjct: 510 VLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKL---QSEK 566

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKA 572
            +     +YT++I      GD+ K 
Sbjct: 567 GLVQDYGSYTSLI------GDLRKT 585



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 207/403 (51%), Gaps = 3/403 (0%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVS 57
           +L   Y+ +G   DA+     +++ +L++   +   L   L  L  T   W  Y++I   
Sbjct: 160 VLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDC 219

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
             P +V   ++++  LC++ ++ +A L   E   +   P+VVS N +++ YCK G  +  
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M++  + PD F+Y++LI+GLC  G +++A +   +M   G+ P+ +T++ L  G
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
             +  +     ++ Q++L KG  PD++TY  LI G C++G++ E  KL   M  +G K +
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              Y++L+   CK G ++ AL +  EM   G++ D V ++ LI G C++ +V +A +   
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM    I P+   +  ++ G C+K  +         +     +  VV YN++++G  K G
Sbjct: 460 EMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            +  A  L   ++   + P  +T+N L+ G CK+G   D  +L
Sbjct: 520 QMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKL 562



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 198/425 (46%), Gaps = 37/425 (8%)

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLY-----------------EMEAVGLKPDLVTY 276
           F+L++ +Y  +   +C    + EA  LL                   +EA G     + +
Sbjct: 99  FRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVF 158

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           S+L+           AIQ +  +    +     + G +   L +  + + A  +++ ++ 
Sbjct: 159 SVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILD 218

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                DV  +N+++    K   I EA  L+ ++ ++ + P++V+FN+LI G+CK+G +  
Sbjct: 219 CGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQ 278

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
             RL   +  + + P   TY+  +N  C+EG +     L  EM  + + P  VT+T +I 
Sbjct: 279 GFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLIN 338

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           G C   +    +++ + M   GV PD ITYNT+I   CK  DLR+A +L+ +M    L+P
Sbjct: 339 GHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              TY +LIDG C  GDL++A  +   + +  I L  VA+T +I   C EG V +A    
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEA---- 454

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
                   E ++R+        ML  G  PD     +++  F + GD+ + F+L   M  
Sbjct: 455 --------ERTLRE--------MLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQC 498

Query: 637 SGLLP 641
            G +P
Sbjct: 499 DGHVP 503


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 115/347 (33%), Positives = 196/347 (56%)

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +E +  F  ++   G  P+   +++L  GF  +  +  A  V  ++  +G  P +V++  
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI G C+ G VEEG +L+ VM S+    +V  +S L++ +CK GR+DE   L  EM   G
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           L P+ VT+++LI G CK  KV  A++ +  M ++ + P+   + A++ GLC+   + EAR
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
              + +  S    D + +  +IDG  K G++  A+++ R+++E+ I    V F  LI G 
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGL 362

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C++G+V DA R+L  +   G +P   TYT  ++ +C++GN+     LL+EM++    P  
Sbjct: 363 CRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGV 422

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           VTY  ++ GLCKQ +++ A  LL+ M  +GV P+ ITYN ++    K
Sbjct: 423 VTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSK 469



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 188/339 (55%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           +L  G+  N   ++VL+   CK G +  A  +  E+   GL+P +V+++ LI G CK   
Sbjct: 133 VLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGA 192

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V +  +L   M S+R+ P+ F   A++ GLC++  + E  + FD +     + + V + +
Sbjct: 193 VEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTV 252

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDG  K G +  A++ ++ ++ + + P +VT+N+LI G CK G + +ARRL++ +   G
Sbjct: 253 LIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASG 312

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L P  +T+TT ++  C+ G+++  L + + M  + I    V +TV+I GLC+  ++ +A 
Sbjct: 313 LRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAE 372

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           ++L DM   G  PD  TY  ++  FCK  ++   F+LL +M      P   TYN L++GL
Sbjct: 373 RMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGL 432

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           C  G +KNA  LL ++    ++   + Y  +++ H   G
Sbjct: 433 CKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHG 471



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 184/350 (52%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L+ +  F  E     + P+    N +M  +CK+G    A+ +F  + K GL P   S+N 
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI G C AG++EE       M    V PD  T+S L  G     ++     +  ++  KG
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P+ VT+TVLI G C+ G V+  LK  ++ML+QG + +++ Y+ L++ +CK G + EA 
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            L+ EM A GL+PD +T++ LI G CK   +  A+++   M  + I  +  A   ++ GL
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGL 362

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C    + +A      ++ +    D   Y +++D + K GN+    +L +++      P +
Sbjct: 363 CRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGV 422

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           VT+N+L+ G CK G+V +A+ LLD +   G+ P+ +TY   +  + + G+
Sbjct: 423 VTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGS 472



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 185/356 (51%)

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  +W    ++L  G  P+   + VL+ G+C++G V     + + +  +G +  V++++
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+S  CK+G ++E   L   ME+  + PD+ T+S LI GLCK+ ++ +   L++EMC K
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN      ++ G C+   +  A   F  ++      D+V YN +I+G  K+G++ EA
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +L  ++    + P  +TF +LI G CK G +  A  +   +   G+E   V +T  ++ 
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISG 361

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C +G +     +L++M +    P   TYT+V+   CK+  +    +LL++M   G  P 
Sbjct: 362 LCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPG 421

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
            +TYN ++   CK   ++ A  LL+ M    + P   TYNIL++G   +G   + D
Sbjct: 422 VVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVD 477



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 189/374 (50%), Gaps = 3/374 (0%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           W  Y ++  S  P N +  ++++ G C+   +  A L   E   +   P+VVS N ++S 
Sbjct: 127 WAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISG 186

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
            CK G  E    L  +M    + PD F+++ LI+GLC  G ++E     ++M   G+ P+
Sbjct: 187 CCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPN 246

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            +T+++L  G     ++  A K  Q +L +G  PD+VTY  LI G C++G+++E  +L  
Sbjct: 247 GVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVN 306

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M + G + + I ++ L+   CK G ++ AL +   M   G++ D V +++LI GLC+  
Sbjct: 307 EMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDG 366

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +VH A ++  +M S    P+   +  ++   C+K  +         +     +  VV YN
Sbjct: 367 RVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYN 426

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +++G  K G +  A  L   ++   ++P+ +T+N L+ G  K+G   D   + ++ K  
Sbjct: 427 ALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDV-DIFNSEK-- 483

Query: 408 GLEPSAVTYTTFMN 421
           GL     +YT  +N
Sbjct: 484 GLVKDYASYTALVN 497



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 170/315 (53%), Gaps = 3/315 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR---N 62
           + + G V  A  V  ++ +  L+ ++ ++N+L+        + + +    V E+ R   +
Sbjct: 152 FCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPD 211

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+T S +I+GLC++ RL +  L   E  GK   P+ V+   ++   CK G  ++A   F 
Sbjct: 212 VFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQ 271

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +ML  G+ PD  +YN LI+GLC  G ++EA    N+M   G+ PD IT++ L  G     
Sbjct: 272 MMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYG 331

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A ++ ++++ +G + D V +TVLI G C+ G V +  ++   MLS GFK +   Y+
Sbjct: 332 DMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYT 391

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +++   CK G +     LL EM++ G  P +VTY+ L+ GLCKQ +V  A  L + M + 
Sbjct: 392 MVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNV 451

Query: 303 RISPNSFAHGAILLG 317
            ++PN   +  +L G
Sbjct: 452 GVAPNDITYNILLEG 466



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 156/297 (52%), Gaps = 20/297 (6%)

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            +N+++ G+ K+G +G A  ++ ++ ++ + P++V+FN+LI G CK G V +  RL   +
Sbjct: 144 FFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVM 203

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           +   + P   T++  +N  C+EG +     L  EM  K + P  VT+TV+I G CK  K+
Sbjct: 204 ESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKV 263

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
             A++  + M   GV PD +TYN +I   CK  DL++A +L+N+M    L P   T+  L
Sbjct: 264 DLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTL 323

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           IDG C  GD+++A  +   + E  I L  VA+T +I   C +G VH A            
Sbjct: 324 IDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDA------------ 371

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
           E  +RD        MLS GF PD     +++  F + G++   F+L   M   G +P
Sbjct: 372 ERMLRD--------MLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVP 420



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 147/305 (48%)

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           ++ ++   Y E+      PN F    ++ G C+   +  AR+ FD +        VV +N
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I G  K G + E  +L   +  +R+ P + TF++LI G CK G++ +   L D +   
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           GL P+ VT+T  ++  C+ G +   L   Q M  + + P  VTY  +I GLCK   L+EA
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            +L+ +M   G+ PD+IT+ T+I   CK  D+  A ++  +M    +E     + +LI G
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISG 361

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC +G + +A+ +L  +           YT ++   C +G+V        +M   G    
Sbjct: 362 LCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPG 421

Query: 588 IRDYT 592
           +  Y 
Sbjct: 422 VVTYN 426



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 20/215 (9%)

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           ++R  A   E+      P    + V++ G CK   +  A  + +++   G+ P  +++NT
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           +I   CK   + + F+L   M    + P   T++ LI+GLC  G L     L   +    
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ 608
           +    V +T +I   C  G V  A+        K F+            MML+ G  PD 
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLAL--------KNFQ------------MMLAQGVRPDL 282

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
                ++    + GDL     L   M  SGL PD+
Sbjct: 283 VTYNALINGLCKVGDLKEARRLVNEMSASGLRPDR 317


>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
 gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
          Length = 886

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/554 (25%), Positives = 255/554 (46%), Gaps = 28/554 (5%)

Query: 76  QSRLQD------AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           +SR +D      A   + + + +EFG  VV        Y K G    A+  F  M   G+
Sbjct: 230 ESRPEDWQAVVSAFERIPKPSRREFGLMVVY-------YAKRGDKHHARATFENMRARGI 282

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P+AF +  L+H   +AG M  AL    +M   G+E   +TYSIL  G+   +    A  
Sbjct: 283 EPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADN 342

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           + ++   K  + + + Y+ +I  +CQ GN++   +L   M   G    +  Y  ++    
Sbjct: 343 LFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYT 402

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
                 + L +   ++  G KP +++Y  LI    K  KV KAI +  EM S  I  N+ 
Sbjct: 403 VVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNK 462

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            +  ++ G         A   F+ +I S    D  +YN++++ + K+GN+  A++++ ++
Sbjct: 463 TYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERM 522

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            ++R+ PS  TF  +I GF   G +  A   LD ++  G  P+ +TY   ++    +  +
Sbjct: 523 QKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQV 582

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           ++ +++L +M    I P   TYT++++G      + +A +    +   G+  D   Y T+
Sbjct: 583 EKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETL 642

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           +R+ CK   ++ A  +  +M    +   +  YNILIDG    GD+  A  LL  ++E  I
Sbjct: 643 LRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGI 702

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------------KSFF 596
                 +T+ I A C  GD+ +A     +M + G + +++ +T             ++  
Sbjct: 703 PPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALK 762

Query: 597 CM--MLSNGFPPDQ 608
           C   M S G  PD+
Sbjct: 763 CFEEMKSAGLKPDE 776



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 133/547 (24%), Positives = 252/547 (46%), Gaps = 30/547 (5%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSE 58
           L   Y+  G +  A+  + +MK   +++++ TY+ L+     T+      +L+ + K   
Sbjct: 292 LVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKL 351

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              N    S +I   CQ   +  A   ++E         +   +++M  Y  +   +   
Sbjct: 352 DNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCL 411

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  + + G  P   SY  LI+     G + +A+  + +M  HG++ +  TYS+L  GF
Sbjct: 412 IVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGF 471

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             L   + A+ + + ++  G  PD   Y +L+  +C++GN++  +++ E M  +  + + 
Sbjct: 472 IHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSN 531

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             +  ++     +G +  A   L  M   G  P ++TY+ LI GL ++ +V KA+ + ++
Sbjct: 532 RTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDK 591

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M    I+PN   +  I+ G      I +A  YF  +  S    DV +Y  ++    K G 
Sbjct: 592 MSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGR 651

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +  A+ + R++  ++I  +   +N LI G+ + G V +A  LL  +K  G+ P+  T+T+
Sbjct: 652 MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTS 711

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
           ++NA C+ G++QR   ++QEM    + P   T+T +IKG  +      A++  E+M   G
Sbjct: 712 YINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAG 771

Query: 479 VTPDQITYNTIIRS----------------FCKCK---------DLRKAFQLLNQMWLHN 513
           + PD+  Y+ ++ S                F  C+         DLR A       WLH 
Sbjct: 772 LKPDEAAYHCLVTSLLSRATVMEGSTYTGIFSVCREMFENDLTVDLRTAVHW--SKWLHK 829

Query: 514 LEPTSAT 520
           +E T   
Sbjct: 830 IERTGGA 836



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/580 (22%), Positives = 254/580 (43%), Gaps = 18/580 (3%)

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           +++++      N +  + ++        ++ A+  ++E   +    +VV+ + ++S Y K
Sbjct: 274 FENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGK 333

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
              A+ A  LF        + +   Y+ +IH  C +G+M+ A E   +M   G++     
Sbjct: 334 TNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDV 393

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y  +  G+ ++        V ++L   G  P I++Y  LI  Y ++G V + + + + M 
Sbjct: 394 YHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEME 453

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           S G K N   YS+L++          A  +  +M   GL+PD   Y++L+   CK   + 
Sbjct: 454 SHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMD 513

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +AI+++  M  +R+ P++     I+ G      +  A    D +  S C   V+ YN +I
Sbjct: 514 RAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALI 573

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            G V+   + +AV +  ++    I+P+  T+  ++ G+  +G +  A      IK  GL+
Sbjct: 574 HGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLK 633

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
                Y T + A C+ G +Q  LA+ +EM  + I      Y ++I G  ++  + EA  L
Sbjct: 634 LDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADL 693

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L+ M   G+ P+  T+ + I + CK  D+++A  ++ +M    L+P   T+  LI G   
Sbjct: 694 LKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAR 753

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTII-----KAHCAEGDVHKAMTFFC-QMVEKGF 584
                 A      ++   +   + AY  ++     +A   EG  +  +   C +M E   
Sbjct: 754 VSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGIFSVCREMFENDL 813

Query: 585 EISIR------------DYTKSFFCMMLSNGFPPDQEICE 612
            + +R            + T       L   FPPD    E
Sbjct: 814 TVDLRTAVHWSKWLHKIERTGGALTEALQRIFPPDWNSSE 853



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/461 (22%), Positives = 210/461 (45%), Gaps = 61/461 (13%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W+ +     +   P    + +++  Y + G+        E M ++G + N   ++ L+ +
Sbjct: 236 WQAVVSAFERIPKPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHA 295

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
              +G +  AL  + EM++ G++  +VTYSILI G  K +    A  L+ E         
Sbjct: 296 YAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKE--------- 346

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
                              A+   D+L       + ++Y+ +I  + + GN+  A +L R
Sbjct: 347 -------------------AKTKLDNL-------NGIIYSNIIHAHCQSGNMDRAEELVR 380

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL---DTIKLHGLEPSAVTYTTFMNAYC 424
           ++ E  I   I  ++S+++G+     V D ++ L   + +K  G +P+ ++Y   +N Y 
Sbjct: 381 EMEEDGIDAPIDVYHSMMHGYTV---VQDEKKCLIVFERLKECGFKPTIISYGCLINLYV 437

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G + + +A+ +EME+  I   + TY+++I G         A  + EDM   G+ PD+ 
Sbjct: 438 KVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRA 497

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            YN ++ +FCK  ++ +A ++  +M    ++P++ T+  +I+G  V GD+K A   L  +
Sbjct: 498 IYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLM 557

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
           +    + T + Y  +I     +  V KA++   +M       SI              G 
Sbjct: 558 RRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKM-------SI-------------AGI 597

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
            P++    +++  +   GD+G  FE    + +SGL  D ++
Sbjct: 598 APNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYI 638



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 134/280 (47%), Gaps = 24/280 (8%)

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            E+   PS   F  ++  + K G    AR   + ++  G+EP+A  +T+ ++AY   G++
Sbjct: 243 FERIPKPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDM 302

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           +  L+ ++EM+++ I  T VTY+++I G  K    Q A  L ++        + I Y+ I
Sbjct: 303 RGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNI 362

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV--SLQEH 547
           I + C+  ++ +A +L+ +M    ++     Y+ ++ G  V  D K   CL+V   L+E 
Sbjct: 363 IHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKK--CLIVFERLKEC 420

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
               T ++Y  +I  +   G V KA+    +M   G + + + Y+      ML NGF   
Sbjct: 421 GFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYS------MLINGF--- 471

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                   I  H   D  + F +   MIKSGL PD+ + N
Sbjct: 472 --------IHLH---DFANAFSIFEDMIKSGLQPDRAIYN 500


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 164/588 (27%), Positives = 278/588 (47%), Gaps = 18/588 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           +LA  Y R G   DA+ V+  M  ++L V   T  +        D    L + ++     
Sbjct: 186 ILARGYCRAGRSMDALGVLDSMPTMNL-VVCNTVVAGFCREGQVDEAERLVERMRDEGLA 244

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGK-EFG---PSVVSLNAIMSRYCKLGFAEV 116
            NV T +  I  LC+  R+ DA     +   K E G   P  V+ + ++S +C+ G  + 
Sbjct: 245 PNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDE 304

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A+ L  +M   G      SYN  + GL   G + EA E   +M   GV+P++ TY+I+  
Sbjct: 305 ARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVD 364

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G     +     KV   +      PD+VTYT L+  YC  GN     ++ + M  +G   
Sbjct: 365 GLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAP 424

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N   Y+VLL S+ K+GRI EA  LL  M   G   D  + +I+I GLC+ +K+  A+ + 
Sbjct: 425 NSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIV 484

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           + M         +  G++ LG   +   +   +  DS     C+ D + Y+ ++    K 
Sbjct: 485 DGM---------WNEGSLALG---RLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKE 532

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   EA +   ++I K ISP  V +++ I+G+CK+GK + A ++L  ++  G +PS  TY
Sbjct: 533 GRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTY 592

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              +  + E+ N   +L L+ EM+ K I P  +TY  +IK  C++  + +A+ LL++M  
Sbjct: 593 NLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQ 652

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             + P+  ++  +I++FCK  D   A ++ +   L         Y+++   L   G    
Sbjct: 653 NEIVPNITSFELLIKAFCKTSDFSAAQRVFDAS-LSTCGQKEVLYSLMCTQLSTYGRWLE 711

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           A  +L ++ E  IS+ +  Y  II+  C   +V         ++ KG+
Sbjct: 712 AMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGY 759



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 228/505 (45%), Gaps = 70/505 (13%)

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           ++ + L+  +L  G  PD F+ NIL+  LC AG ME A    + M     E +  ++ IL
Sbjct: 132 DLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAM----PERNEFSFGIL 187

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
           A+G                                   YC+ G   + L + + M +   
Sbjct: 188 ARG-----------------------------------YCRAGRSMDALGVLDSMPT--- 209

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
            +N++  + +++  C+ G++DEA  L+  M   GL P++VT++  I  LCK  +V  A +
Sbjct: 210 -MNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYR 268

Query: 295 LYNEMCSKR----ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           ++N+M  K       P+      +L G CE  M+ EAR+  D +     ++ V  YN  +
Sbjct: 269 IFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWL 328

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            G V+ G +GEA +L R++  + + P+  T+N ++ G CK GK  D R++ D +K   + 
Sbjct: 329 SGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMT 388

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P  VTYT+ ++AYC EGN      +L EM  K   P   TY V+++ L K  ++ EA +L
Sbjct: 389 PDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERL 448

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW-------------------- 510
           LE M   G + D  + N II   C+   L  A  +++ MW                    
Sbjct: 449 LERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTD 508

Query: 511 ---LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
                   P   TY+ L+  LC  G    A   L+ +   +IS   V Y T I  +C  G
Sbjct: 509 SSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHG 568

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT 592
               A+     M +KG + S R Y 
Sbjct: 569 KTSLAVKVLRDMEKKGCKPSTRTYN 593



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/560 (27%), Positives = 255/560 (45%), Gaps = 37/560 (6%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDA-ILFLQETAGKEFGPSVVSLNA 103
           D++  LY D+ +S    +V+T +I++  LC   R++ A  +F       EF     S   
Sbjct: 132 DLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMPERNEF-----SFGI 186

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           +   YC+ G +  A G+   M    L       N ++ G C  G ++EA      M   G
Sbjct: 187 LARGYCRAGRSMDALGVLDSMPTMNL----VVCNTVVAGFCREGQVDEAERLVERMRDEG 242

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKV---IQKLLIKG-SDPDIVTYTVLICGYCQIGNV 219
           + P+ +T++          ++  A+++   +Q+   +G   PD VT+ V++ G+C+ G V
Sbjct: 243 LAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMV 302

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           +E   L ++M   GF   V +Y+  LS + ++G + EA  LL EM   G++P+  TY+I+
Sbjct: 303 DEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNII 362

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           + GLCK+ K     ++ + + S  ++P+   + ++L   C +     A    D +    C
Sbjct: 363 VDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGC 422

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             +   YN+++    K G I EA +L  ++ EK  S    + N +I G C+N K+  A  
Sbjct: 423 APNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMD 482

Query: 400 LLDTIKLHG-----------------------LEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           ++D +   G                         P  +TY+T ++A C+EG        L
Sbjct: 483 IVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKL 542

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
            EM  K I P  V Y   I G CK  K   AV++L DM   G  P   TYN +I  F + 
Sbjct: 543 LEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREK 602

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
            +  +  +L+++M    + P   TYN LI   C  G +  A  LL  + ++ I     ++
Sbjct: 603 HNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSF 662

Query: 557 TTIIKAHCAEGDVHKAMTFF 576
             +IKA C   D   A   F
Sbjct: 663 ELLIKAFCKTSDFSAAQRVF 682



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 209/495 (42%), Gaps = 62/495 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRN 62
           +   GMV +A  ++  M+       +++YN  L  L    ++    +L  ++       N
Sbjct: 296 FCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPN 355

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            YT +I++DGLC++ +  D              P VV+  +++  YC  G A  A  +  
Sbjct: 356 SYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILD 415

Query: 123 LMLKYGLHPDAFSYNIL-----------------------------------IHGLCIAG 147
            M + G  P++F+YN+L                                   I GLC   
Sbjct: 416 EMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNN 475

Query: 148 SMEEALEFTNDM--------GRHGVE---------------PDAITYSILAKGFHLLSQI 184
            ++ A++  + M        GR G                 PD ITYS L        + 
Sbjct: 476 KLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRF 535

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A K + +++ K   PD V Y   I GYC+ G     +K+   M  +G K +   Y++L
Sbjct: 536 DEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLL 595

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +    +    DE L L+ EM+  G+ P+++TY+ LI+  C++  V+KA+ L +EM    I
Sbjct: 596 IWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEI 655

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN  +   ++   C+    + A+  FD+  +S C Q  VLY++M       G   EA+ 
Sbjct: 656 VPNITSFELLIKAFCKTSDFSAAQRVFDA-SLSTCGQKEVLYSLMCTQLSTYGRWLEAMN 714

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +   ++E RIS     +  +I G CK  +V    RLL  + + G       +   ++A  
Sbjct: 715 ILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAAFMPVIDALS 774

Query: 425 EEGNIQRLLALLQEM 439
           E G  Q +  L Q+M
Sbjct: 775 ERGKKQHVDMLSQKM 789



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/226 (21%), Positives = 89/226 (39%), Gaps = 26/226 (11%)

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y   + A  +E     + +L +++      P   T  ++++ LC   +++ A ++ + M 
Sbjct: 118 YNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAM- 176

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
                 ++ ++  + R +C+      A  +L+ M   NL       N ++ G C  G + 
Sbjct: 177 ---PERNEFSFGILARGYCRAGRSMDALGVLDSMPTMNL----VVCNTVVAGFCREGQVD 229

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF 595
            A+ L+  +++  ++   V +   I A C  G V  A   F  M EK             
Sbjct: 230 EAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEK------------- 276

Query: 596 FCMMLSNGFP-PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                  G P PDQ   +VML  F + G +     L  +M   G L
Sbjct: 277 ----WERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFL 318


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 228/456 (50%), Gaps = 9/456 (1%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ--- 192
           Y ++I+    + S+  ++ + N+M  +G  P +  ++ L       S  +  W       
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 193 -KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            K+++     D+ ++ +LI G C+ G +E+   L   +   GF  NV+ Y+ L+   CK 
Sbjct: 157 SKVVL-----DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKK 211

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G I++A  L +EM  +GL  +  TY++LI GL K     +  ++Y +M    + PN + +
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++  LC+     +A   FD +       ++V YN +I G  +   + EA ++  Q+  
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
             I+P+++T+N+LI GFC  GK+  A  L   +K  GL PS VTY   ++ +C +G+   
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              +++EME + I P+ VTYT++I    +   +++A+QL   M  +G+ PD  TY+ +I 
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            FC    + +A +L   M   N EP    YN +I G C  G    A  LL  ++E  ++ 
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAP 511

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
              +Y  +I+  C E    +A     +M++ G + S
Sbjct: 512 NVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 241/467 (51%), Gaps = 4/467 (0%)

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           I++ Y +     ++   F  M+  G  P +  +N L+  +  + S  +   F N+  +  
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSK 158

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           V  D  ++ IL KG     +I  ++ ++ +L   G  P++V YT LI G C+ G +E+  
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
            L   M   G   N   Y+VL++ + K+G   +   +  +M+  G+ P+L TY+ ++  L
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CK  +   A Q+++EM  + +S N   +  ++ GLC +  + EA    D +       ++
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           + YN +IDG+  +G +G+A+ L R L  + +SPS+VT+N L+ GFC+ G  + A +++  
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           ++  G++PS VTYT  ++ +    N+++ + L   ME   + P   TY+V+I G C + +
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           + EA +L + M      P+++ YNT+I  +CK     +A +LL +M    L P  A+Y  
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
           +I+ LC     K A+ L+  + +  I  +    + I +   A+ D H
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISR---AKNDSH 562



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 201/400 (50%), Gaps = 1/400 (0%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           W  +++ K S+   +VY+  I+I G C+   ++ +   L E     F P+VV    ++  
Sbjct: 149 WSFFNENK-SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDG 207

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
            CK G  E AK LF  M K GL  +  +Y +LI+GL   G  ++  E    M   GV P+
Sbjct: 208 CCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN 267

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
             TY+ +        +   A++V  ++  +G   +IVTY  LI G C+   + E  K+ +
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M S G   N+I Y+ L+   C  G++ +AL L  ++++ GL P LVTY+IL+ G C++ 
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
               A ++  EM  + I P+   +  ++      + + +A     S+     + DV  Y+
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           ++I G+   G + EA +L++ ++EK   P+ V +N++I G+CK G    A +LL  ++  
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            L P+  +Y   +   C+E   +    L+++M    I P+
Sbjct: 508 ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 191/427 (44%), Gaps = 16/427 (3%)

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           S+  K     Y V+++S  +S  ++ ++    EM   G  P    ++ L+  +      +
Sbjct: 87  SETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFN 146

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +    +NE  SK +  + ++ G ++ G CE   I ++      L       +VV+Y  +I
Sbjct: 147 QWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLI 205

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           DG  K G I +A  L+ ++ +  +  +  T+  LI G  KNG       + + ++  G+ 
Sbjct: 206 DGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF 265

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+  TY   MN  C++G  +    +  EM  + +    VTY  +I GLC++ KL EA ++
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           ++ M   G+ P+ ITYNT+I  FC    L KA  L   +    L P+  TYNIL+ G C 
Sbjct: 326 VDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR 385

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            GD   A  ++  ++E  I  +KV YT +I       ++ KA+     M E G    +  
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445

Query: 591 YT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
           Y+                  F  M+     P++ I   M++ + + G      +L   M 
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505

Query: 636 KSGLLPD 642
           +  L P+
Sbjct: 506 EKELAPN 512



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 139/278 (50%), Gaps = 3/278 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVY 64
           + G   DA  V  +M+E  +  +I TYN+L+  L R   +     + D +K      N+ 
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +IDG C   +L  A+   ++   +   PS+V+ N ++S +C+ G    A  +   M
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G+ P   +Y ILI     + +ME+A++    M   G+ PD  TYS+L  GF +  Q+
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A ++ + ++ K  +P+ V Y  +I GYC+ G+    LKL + M  +    NV +Y  +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           +  +CK  +  EA  L+ +M   G+ P     S++ R 
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 5/176 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYD-DIKVSE---TPR 61
           + R G    A  ++ +M+E  +K S  TY  L+     +D M       + + E    P 
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP- 441

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V+T S++I G C + ++ +A    +    K   P+ V  N ++  YCK G +  A  L 
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             M +  L P+  SY  +I  LC     +EA      M   G++P     S++++ 
Sbjct: 502 KEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 244/519 (47%), Gaps = 19/519 (3%)

Query: 36  SLLYNLR-HTD-IMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKE 93
           SLL  L  H D  M+D   D + +  P +    + ++       R  DA+         +
Sbjct: 108 SLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQ 167

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
             P+    N I+      G   +A  L+  M+  G  P+  +YN+L+ GLC  G   +AL
Sbjct: 168 SRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDAL 227

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           +  ++M   G+ P+   Y++L        +I  A +++  +  KG  PD VTY   + G 
Sbjct: 228 KMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287

Query: 214 CQIGNVEEGLKLREVMLSQG-FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           C++G V E  + R VML  G F L +  YS L+  + ++ R DE  G    M    + PD
Sbjct: 288 CKVGRVNEAFQ-RLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPD 346

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +V Y+I+IRG  +  ++  A+   + M  K   P++F +  +L  LC+   +  A     
Sbjct: 347 VVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRS 406

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            ++ +N + D     IMI G  K G + EA+Q++ ++ E    P+++T+N+LI GF + G
Sbjct: 407 EMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG 466

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTT--------------FMNAYCEEGNIQRLLALLQE 438
           ++ +AR L   +++ G  PS     T               ++  C+ G + +   LL+ 
Sbjct: 467 RLEEARMLFHKMEM-GNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRS 525

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           +    + P  VTY  +I GLCK   L  AV+L +++ + G++PD+ITY T+I    +   
Sbjct: 526 IIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHR 585

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
              A  L   +      P+ + YN ++  LC    L  A
Sbjct: 586 ENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQA 624



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 151/604 (25%), Positives = 266/604 (44%), Gaps = 19/604 (3%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSE 58
           L   +S  G   DAV   ++M E   + +   YN++L  L  + ++     LY+ +  + 
Sbjct: 143 LVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAG 202

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              N  T ++++DGLC+Q    DA+    E   +   P+V     ++S  C  G  + A 
Sbjct: 203 CAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAV 262

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   M   G  PD  +YN  + GLC  G + EA +    +   G       YS L  G 
Sbjct: 263 QLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGL 322

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               +    +   + +L +   PD+V YT++I G  + G +E+ L   +VM  +GF  + 
Sbjct: 323 FQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDT 382

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+ +L  +C  G ++ A  L  EM    L  D  T +I+I GLCK+  V +A+Q+++E
Sbjct: 383 FCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDE 442

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM-------------SNCIQDVVL 345
           M      P    + A++ G   +  + EARM F  + M             +N + D   
Sbjct: 443 MGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSES 502

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
              ++    + G + +A +L R +I+  + P +VT+N+LI G CK   +  A RL   ++
Sbjct: 503 LRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQ 562

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           L G+ P  +TY T ++           + L Q +      P+   Y  +++ LC+  KL 
Sbjct: 563 LKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLS 622

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD--LRKAFQLLNQMWLHNLEPTSATYNI 523
           +A+ L  D Y+       +    +  +  + +D  L    + L ++       +S  Y I
Sbjct: 623 QAINLWLD-YLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTI 681

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            + GLC      +A  +  +LQE  I +T      +I   C + +++ A+      + K 
Sbjct: 682 WLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKS 741

Query: 584 FEIS 587
             +S
Sbjct: 742 IILS 745



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 194/448 (43%), Gaps = 60/448 (13%)

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
           S P    Y  ++      G +   L L   M++ G   N   Y+VL+  +CK G   +AL
Sbjct: 168 SRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDAL 227

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +  EM   G+ P++  Y++L+  LC   K+ +A+QL   M  K   P+   + A L GL
Sbjct: 228 KMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287

Query: 319 CEKEMITEARMYFDSLIMSNCIQD------VVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
           C+   + EA   F  L+M   +QD      +  Y+ +IDG  +     E    Y+ ++E+
Sbjct: 288 CKVGRVNEA---FQRLVM---LQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLER 341

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            ISP +V +  +I G  + G++ DA   LD +K  G  P    Y T +   C+ G+++R 
Sbjct: 342 NISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERA 401

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             L  EM    +     T T++I GLCK+  + EA+Q+ ++M   G  P  +TYN +I  
Sbjct: 402 HTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDG 461

Query: 493 F-----------------------------------CKCKDLRK-------------AFQ 504
           F                                   C  + LRK             A++
Sbjct: 462 FYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYK 521

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           LL  +    + P   TYN LI+GLC   +L  A  L   LQ   IS  ++ Y T+I    
Sbjct: 522 LLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLL 581

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYT 592
                + AM  F  +++ G   S+  Y 
Sbjct: 582 RAHRENDAMMLFQNILQSGSSPSLSIYN 609



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 193/417 (46%), Gaps = 7/417 (1%)

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           + G   +  A++ L+++   +GR  +A+     M+    +P    Y+ +++ L     + 
Sbjct: 130 AAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVIL 189

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A+ LYN M +   +PN   +  ++ GLC++ M  +A   FD ++    + +V +Y +++
Sbjct: 190 LALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLL 249

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
                 G I EAVQL   + +K   P  VT+N+ + G CK G+V +A + L  ++  G  
Sbjct: 250 SSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFA 309

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
                Y+  ++   +           + M  + I P  V YT++I+G  +  ++++A+  
Sbjct: 310 LGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSF 369

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L+ M   G  PD   YNT+++  C   DL +A  L ++M  +NL   S T  I+I GLC 
Sbjct: 370 LDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCK 429

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            G +  A  +   + EH    T + Y  +I     EG + +A   F +M E G   S+  
Sbjct: 430 RGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSL-- 486

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               F  + L      D E    ++    Q G +   ++L   +I SG++PD    N
Sbjct: 487 ----FLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYN 539



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 233/514 (45%), Gaps = 61/514 (11%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
           + G V++A   +  +++    + ++ Y+ L   L+  R  D  +  Y  +       +V 
Sbjct: 289 KVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVV 348

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             +I+I G  +  R++DA+ FL     K F P     N ++   C  G  E A  L   M
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L+  L  D+ +  I+I GLC  G ++EA++  ++MG HG +P  +TY+ L  GF+   ++
Sbjct: 409 LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRL 468

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +  K+ + G++P +  +  L  G  Q+ + E    LR+                L
Sbjct: 469 EEARMLFHKMEM-GNNPSL--FLRLTLGANQVCDSES---LRK----------------L 506

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  MC+SG++ +A  LL  +   G+ PD+VTY+ LI GLCK   +  A++L+ E+  K I
Sbjct: 507 VHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGI 566

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SP+   +G ++ GL       +A M F +++ S     + +YN M+    ++  + +A+ 
Sbjct: 567 SPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAIN 626

Query: 365 LY---------------------------------RQLIEKRISPSIVTFNS---LIYGF 388
           L+                                 R+LI+       ++ N     + G 
Sbjct: 627 LWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGL 686

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C+  +  DA R+  T++  G++ +       +N  C + N+   + ++    +K+I  + 
Sbjct: 687 CQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQ 746

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
                +++ LC  ++ Q+A  L   M+++G   D
Sbjct: 747 PVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMD 780


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 211/400 (52%), Gaps = 3/400 (0%)

Query: 187 AWKVIQ-KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
           A+++ + +LL +  D + +TY  LI G+C+ G++E   +L   M  +G   +V+ +S ++
Sbjct: 88  AYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIV 147

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
            ++C +G +  A+   Y  E+V   PD V ++IL+ GLCK +++ +A Q+  EM  + I 
Sbjct: 148 QALCNTGNLSRAMQ--YFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIV 205

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+   + +++ GLC+   + EAR   ++++      ++V YN +I GY K G  G A QL
Sbjct: 206 PDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQL 265

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++I+    P +VTFNSLI GFC+  K+  A  +L  +K     P+ VTY   ++  C+
Sbjct: 266 IERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCD 325

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G       LL EM+ + I P  +TY  +I   C+ +++++A Q+   M   GV PD I+
Sbjct: 326 AGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGIS 385

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           Y T+  +  K +   +AF LL+ M+     P   T+N L++GLC +  L  A  LL  ++
Sbjct: 386 YCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMR 445

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
                     Y  ++   C  G V  A      MV +G +
Sbjct: 446 RVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQ 485



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 229/450 (50%), Gaps = 7/450 (1%)

Query: 134 FSYNILIHGLCIAGSMEEALEFTND--MGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           F+ N L+  L  A    +A +   D  +G+H  + + ITY+ L  GF     +  A++++
Sbjct: 70  FTCNCLLRTLVKARRHHQAYQIFRDELLGQH-CDTNHITYNTLIGGFCKAGDMERAFQLL 128

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LREVMLSQGFKLNVIAYSVLLSSMCK 250
            ++  +G  PD+VT++ ++   C  GN+   ++  RE   S     + + +++L+  +CK
Sbjct: 129 AEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE---SVECAPDSVLFNILVHGLCK 185

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           + ++ EA  ++ EM   G+ PD+VTY+ LI GLCK  ++ +A QL   M  +++ PN   
Sbjct: 186 ANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVT 245

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C+      A    + +I S    DVV +N +I G+ +   I +A ++   + 
Sbjct: 246 YNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMK 305

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           +   +P++VT+N LI G C  G+  +A  LL  +   G+ P  +TY + +  +C    I+
Sbjct: 306 KGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIE 365

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           +   +   M  + + P  ++Y  +   L K  +  EA  LL++M+  G  P+  T+N+++
Sbjct: 366 QAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLM 425

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              C  + L +A  LL  M     +P ++TY +L+ GLC  G + +A  +LV +    I 
Sbjct: 426 EGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQ 485

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
               +  TI+     EG    A+ +F Q+V
Sbjct: 486 PLVSSSGTIVHTLAREGKQDLALHYFDQVV 515



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 212/422 (50%), Gaps = 8/422 (1%)

Query: 33  TYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN+L+        M   + L  ++K      +V T+S ++  LC    L  A+ + +E+
Sbjct: 107 TYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRES 166

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
              E  P  V  N ++   CK      A+ +   M + G+ PD  +YN LI GLC +  M
Sbjct: 167 V--ECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRM 224

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           EEA +    M +  V P+ +TY+ L  G+        A ++I++++  G+ PD+VT+  L
Sbjct: 225 EEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSL 284

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G+CQ   +++  ++  +M       N++ Y+VL+S +C +GR +EA  LL EM+  G+
Sbjct: 285 ISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGI 344

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            PD++TY+ LI   C+  ++ +A Q+ N M  + + P+  ++  + + L + E   EA  
Sbjct: 345 LPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFA 404

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             D++  +  I ++  +N +++G      + EA  L   +      P+  T+  L+ G C
Sbjct: 405 LLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLC 464

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM---ETKAIGP 446
           K G+V DA+ +L  +   G++P   +  T ++    EG     L    ++   E+KA  P
Sbjct: 465 KAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDP 524

Query: 447 TH 448
           ++
Sbjct: 525 SY 526



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 212/435 (48%), Gaps = 6/435 (1%)

Query: 33  TYNSLLYNL----RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
           T N LL  L    RH        D++       N  T + +I G C+   ++ A   L E
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
              +   P VV+ ++I+   C  G    A   F   ++    PD+  +NIL+HGLC A  
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQ 188

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           + EA +   +M   G+ PD +TY+ L  G     ++  A ++++ ++ +   P++VTY  
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNT 248

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI GYC+ G      +L E M+  G   +V+ ++ L+S  C+  +ID+A  +L+ M+   
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
             P+LVTY++LI GLC   + ++A +L +EM  + I P+   + +++   C    I +A 
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAF 368

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
              + ++    I D + Y  +    +K     EA  L   + +    P++ TFNSL+ G 
Sbjct: 369 QIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGL 428

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C + ++ +AR LL  ++  G +P+A TY   +   C+ G +     +L  M ++ I P  
Sbjct: 429 CCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLV 488

Query: 449 VTYTVVIKGLCKQWK 463
            +   ++  L ++ K
Sbjct: 489 SSSGTIVHTLAREGK 503



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 130/298 (43%), Gaps = 32/298 (10%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR 61
           L + Y +TG    A  +I +M +      + T+NSL                        
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSL------------------------ 284

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
                   I G CQ+S++  A   L         P++V+ N ++S  C  G A  A  L 
Sbjct: 285 --------ISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELL 336

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G+ PD  +YN LI   C    +E+A +  N M   GV PD I+Y  LA      
Sbjct: 337 SEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKS 396

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A+ ++  +   G+ P++ T+  L+ G C    ++E   L  VM   G       Y
Sbjct: 397 ERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTY 456

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            VL++ +CK+GR+D+A  +L  M + G++P + +   ++  L ++ K   A+  ++++
Sbjct: 457 EVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQV 514



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 22/201 (10%)

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
            H+TY  +I G CK   ++ A QLL +M   G +PD +T+++I+++ C   +L +A Q  
Sbjct: 104 NHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF 163

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +       P S  +NIL+ GLC    L  A  ++  + E  I    V Y ++I   C  
Sbjct: 164 RESV--ECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKS 221

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
             + +A      MV++    ++  Y                      ++  + + G  G 
Sbjct: 222 YRMEEARQLLETMVKRKVRPNLVTYN--------------------TLIYGYCKTGCTGL 261

Query: 627 VFELAAVMIKSGLLPDKFLIN 647
             +L   MI+SG  PD    N
Sbjct: 262 AHQLIERMIQSGTHPDVVTFN 282


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 157/659 (23%), Positives = 297/659 (45%), Gaps = 20/659 (3%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVY 64
            + G V +A+ V  +MKE  +     +YNSL+      D+     +L++ +       N Y
Sbjct: 358  QVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGY 417

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T+ + I+   +  +   AI   +    K   P V + NA++      G   +AK +F  +
Sbjct: 418  THVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYEL 477

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
               G+ PD  +Y ++I     A   +EA+ F +DM   G  PD +  + L    +   + 
Sbjct: 478  KAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKG 537

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
            + AW++  KL     +P   TY  L+ G  + G V+E ++L E M    +  N+I Y+ +
Sbjct: 538  NEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTV 597

Query: 245  LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
            L  + K+G ++ A+ +LY M   G  PDL +Y+ ++ GL K++++ +A +++ +M  K +
Sbjct: 598  LDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKIL 656

Query: 305  SPNSFAHGAILLGLCEKEMITEARMYFDSLIM-SNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +P+      IL    +  ++ EA       I+ + C  D   ++ +++G +K   + +++
Sbjct: 657  APDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSI 716

Query: 364  QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +    +  + I  +      LI   CK+ K  +A +L +  K  G+     +Y + +   
Sbjct: 717  EFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGL 776

Query: 424  CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
             +E  I     L  EM+    GP   TY +++  + K  +++E +++ ++M+  G     
Sbjct: 777  VDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTY 836

Query: 484  ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            +TYNTII    K K L +A  L   +      PT  TY  L+DGL  +G + +A+ L   
Sbjct: 837  VTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNE 896

Query: 544  LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT----------- 592
            + E+        Y  ++  H   G+       F +MVE+G    I+ YT           
Sbjct: 897  MLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGR 956

Query: 593  ----KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                  +F  +   G  PD  +  +++    +   +     L   M K G++P+ +  N
Sbjct: 957  LNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYN 1015



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 152/598 (25%), Positives = 267/598 (44%), Gaps = 16/598 (2%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDIKVSETPRNVYTN 66
           G +  A   +  M+E  + ++  TYN L+Y L  +       ++Y  +       +V T 
Sbjct: 150 GGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTY 209

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S+++    ++  +   +  L E   +   P+V S    +    +    + A  +   M  
Sbjct: 210 SVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMED 269

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD  ++ ++I  LC AG + +A      M     +PD +TY  L            
Sbjct: 270 SGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQS 329

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
             +V   ++  G + +IV+YT ++   CQ+G V+E L + + M  +G      +Y+ L+S
Sbjct: 330 VVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLIS 389

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
              K+   D AL L   M A G  P+  T+ + I    K  +  KAIQ Y  M SK I P
Sbjct: 390 GFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVP 449

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +  A  A+L  L     +  A+  F  L       D + Y +MI    K     EA+  +
Sbjct: 450 DVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFF 509

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             ++E    P ++  NSLI    K GK  +A +L   +K   +EP+  TY T ++    E
Sbjct: 510 SDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGRE 569

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G ++ ++ LL+EM      P  +TY  V+  L K  ++  A+ +L  M   G  PD  +Y
Sbjct: 570 GKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSY 629

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           NT++    K + L +AF++  QM    L P  AT   ++     NG +K A   L +++E
Sbjct: 630 NTVMYGLIKEERLEEAFRMFCQMK-KILAPDYATLCTILPSFVKNGLMKEA---LHTVKE 685

Query: 547 H----NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
           +      ++ K ++ ++++    +  V K++ F   +  +G  I + D+   F C ++
Sbjct: 686 YILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRG--ILLNDF---FLCPLI 738



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 138/570 (24%), Positives = 249/570 (43%), Gaps = 40/570 (7%)

Query: 7    SRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNV 63
            S+     +A+   + M E      +   NSL   LY     +  W L+  +K  +     
Sbjct: 497  SKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTN 556

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             T + ++ GL ++ ++++ +  L+E     + P++++ N ++    K G    A  +   
Sbjct: 557  GTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYS 616

Query: 124  MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
            M + G  PD  SYN +++GL     +EEA      M +  + PD  T   +   F     
Sbjct: 617  MTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKILAPDYATLCTILPSFVKNGL 675

Query: 184  ISGAWKVIQKLLIK-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A   +++ ++K G + D  ++  L+ G  +   VE+ ++  E + S+G  LN     
Sbjct: 676  MKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLC 735

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             L+  +CK  +  EA  L  + + +G+     +Y+ LIRGL  ++ +  A  L+ EM   
Sbjct: 736  PLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL 795

Query: 303  RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
               P+ F +  IL  + +   + E       +         V YN +I G VK   + +A
Sbjct: 796  GCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQA 855

Query: 363  VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            + LY  L+ +  SP+  T+  L+ G  K+GK+ DA  L + +  +G EP+   Y   +N 
Sbjct: 856  IDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNG 915

Query: 423  YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC----------------------- 459
            +   GN + +  L ++M  + I P   +YT++I  LC                       
Sbjct: 916  HRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPD 975

Query: 460  ------------KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
                        K  +++EAV L  +M   G+ P+  TYN++I    K     +A Q+  
Sbjct: 976  LIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYE 1035

Query: 508  QMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
            ++     +P+  TYN LI G  V+G   NA
Sbjct: 1036 ELLRKGWKPSVFTYNALIRGYSVSGSTDNA 1065



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 140/552 (25%), Positives = 243/552 (44%), Gaps = 38/552 (6%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVY 64
            + G  ++A  +  K+KE+ ++ +  TYN+LL  L R   +  +  L +++  +  P N+ 
Sbjct: 533  KGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLI 592

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T + V+D L +   +  AI  L     K   P + S N +M    K    E A  +FC M
Sbjct: 593  TYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM 652

Query: 125  -----------------------------------LKYGLHPDAFSYNILIHGLCIAGSM 149
                                               LK G + D  S++ L+ G+     +
Sbjct: 653  KKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGV 712

Query: 150  EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
            E+++EF  ++   G+  +      L +      +   A ++  K    G      +Y  L
Sbjct: 713  EKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSL 772

Query: 210  ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
            I G      ++    L   M   G   +   Y+++L +M KS R++E L +  EM   G 
Sbjct: 773  IRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGY 832

Query: 270  KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            +   VTY+ +I GL K  ++ +AI LY  + S+  SP    +G +L GL +   + +A  
Sbjct: 833  ESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAEN 892

Query: 330  YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             F+ ++   C  +  +YNI+++G+   GN     QL+ +++E+ I+P I ++  LI   C
Sbjct: 893  LFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLC 952

Query: 390  KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
              G++ D       +   GLEP  + Y   ++   +   I+  ++L  EM+ K I P   
Sbjct: 953  TAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLY 1012

Query: 450  TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            TY  +I  L K  K  EA Q+ E++   G  P   TYN +IR +        A+    QM
Sbjct: 1013 TYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQM 1072

Query: 510  WLHNLEPTSATY 521
             +   +P S+TY
Sbjct: 1073 IVGGCQPNSSTY 1084



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/449 (24%), Positives = 192/449 (42%), Gaps = 7/449 (1%)

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVE---PDAITYSI-LAKGFHLLSQISGAWKVIQKL 194
           ++H L  A    EALE      R   +    ++  Y + L +    +  ++  + ++QK 
Sbjct: 71  VVHMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQ 130

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           ++K    ++ T+  +  G    G +        VM   G  LN   Y+ L+  + KSG  
Sbjct: 131 VVK---TNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFD 187

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            EA+ +   M   G+ P + TYS+L+    K+  V   + L NEM ++ + PN +++   
Sbjct: 188 AEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTIC 247

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           +  L +     EA      +  S C  DVV + ++I      G + +A  ++ ++     
Sbjct: 248 IRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQ 307

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P  VT+ +L+     +G       + + +   G   + V+YT  ++A C+ G +   LA
Sbjct: 308 KPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALA 367

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +  EM+ K + P   +Y  +I G  K      A++L   M   G +P+  T+   I  + 
Sbjct: 368 VFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYG 427

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K     KA Q    M    + P  A  N ++  L  +G L  A  +   L+   +S   +
Sbjct: 428 KSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTI 487

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            YT +IK         +AM FF  MVE G
Sbjct: 488 TYTMMIKCCSKASKADEAMNFFSDMVESG 516



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 167/351 (47%), Gaps = 35/351 (9%)

Query: 69   VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
            +I  LC+  +  +A     +  G        S N+++         ++A+ LF  M + G
Sbjct: 737  LIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLG 796

Query: 129  LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG----------- 177
              PD F+YN+++  +  +  +EE L+   +M R G E   +TY+ +  G           
Sbjct: 797  CGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAI 856

Query: 178  ---FHLLSQ---------------------ISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
               ++L+S+                     +  A  +  ++L  G +P+   Y +L+ G+
Sbjct: 857  DLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGH 916

Query: 214  CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
               GN E   +L E M+ QG   ++ +Y++L+ ++C +GR+++ L    ++  +GL+PDL
Sbjct: 917  RIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDL 976

Query: 274  VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            + Y++LI GL K +++ +A+ L+NEM  K I PN + + +++L L +     EA   ++ 
Sbjct: 977  IVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEE 1036

Query: 334  LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            L+       V  YN +I GY   G+   A   Y Q+I     P+  T+  L
Sbjct: 1037 LLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQL 1087



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 3/205 (1%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVSETPRNVY 64
            ++G + DA  +  +M E   + +   YN LL   R   +T+ +  L++ +       ++ 
Sbjct: 883  KSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIK 942

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            + +I+ID LC   RL D + + ++       P ++  N ++    K    E A  LF  M
Sbjct: 943  SYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEM 1002

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             K G+ P+ ++YN LI  L  AG   EA +   ++ R G +P   TY+ L +G+ +    
Sbjct: 1003 KKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGST 1062

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVL 209
              A+    ++++ G  P+  TY  L
Sbjct: 1063 DNAYAAYGQMIVGGCQPNSSTYMQL 1087


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 249/523 (47%), Gaps = 50/523 (9%)

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           ++ FL     + + P   S N+++S  CKLG  + A+ +   M ++G  PD  SYN LI 
Sbjct: 40  SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99

Query: 142 GLCIAGSMEEA-LEFTNDMGRHGV--EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           G C  G +  A L   +    HG   +PD ++++ L  GF  +  +   + V   +++K 
Sbjct: 100 GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKC 158

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P++VTY+  I  +C+ G ++  LK    M       NV+ ++ L+   CK+G ++ A+
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF--------- 309
            L  EM  V +  ++VTY+ LI G CK+ ++ +A ++Y+ M   R+ PNS          
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278

Query: 310 --------------------------AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
                                     A+G I+ GLC    + EA    + +  S+ + D+
Sbjct: 279 FQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDM 338

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V++  M++ Y K G +  AV +Y +LIE+   P +V  +++I G  KNG++ +A      
Sbjct: 339 VIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA-----I 393

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +     + + V YT  ++A C+EG+   +  L  ++    + P    YT  I GLCKQ  
Sbjct: 394 VYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGN 453

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           L +A +L   M   G+  D + Y T+I        + +A Q+ ++M    + P SA +++
Sbjct: 454 LVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDL 513

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           LI      G++  A  LL+ +Q   +       T +  A C++
Sbjct: 514 LIRAYEKEGNMAAASDLLLDMQRRGL------VTAVSDADCSK 550



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 251/520 (48%), Gaps = 29/520 (5%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           ++  G  P   S+N ++  +C  G ++ A +  + M R G EPD I+Y+ L  G      
Sbjct: 47  LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106

Query: 184 ISGAWKVIQKLLIKGS---DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           I  A  V++ L         PDIV++  L  G+ ++  ++E      VML +    NV+ 
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVT 165

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           YS  + + CKSG +  AL   + M+   L P++VT++ LI G CK   +  A+ LY EM 
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
             R+S N   + A++ G C+K  +  A   +  ++      + ++Y  +IDG+ + G+  
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A++   +++ + +   I  +  +I G C NGK+ +A  +++ ++   L P  V +TT M
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           NAY + G ++  + +  ++  +   P  V  + +I G+ K  +L EA+     +Y     
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-----VYFCIEK 400

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            + + Y  +I + CK  D  +  +L +++    L P    Y   I GLC  G+L +A  L
Sbjct: 401 ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKL 460

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
              + +  + L  +AYTT+I    ++G           MVE           +  F  ML
Sbjct: 461 KTRMVQEGLLLDLLAYTTLIYGLASKG----------LMVE----------ARQVFDEML 500

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           ++G  PD  + ++++ A+ + G++ +  +L   M + GL+
Sbjct: 501 NSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 238/518 (45%), Gaps = 70/518 (13%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD F+ N  IH L  +     +L+F   +   G  P   +++ +      L Q+  A  +
Sbjct: 19  PDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDI 78

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG-LKLREVMLSQGF--KLNVIAYSVLLSS 247
           +  +   G +PD+++Y  LI G+C+ G++    L L  +  S GF  K ++++++ L + 
Sbjct: 79  VHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNG 138

Query: 248 MCKSGRIDEALGLLYEMEAVGLK---PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
             K   +DE    +     V LK   P++VTYS  I   CK  ++  A++ ++ M    +
Sbjct: 139 FSKMKMLDEVFVYM----GVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDAL 194

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           SPN                                   VV +  +IDGY K G++  AV 
Sbjct: 195 SPN-----------------------------------VVTFTCLIDGYCKAGDLEVAVS 219

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           LY+++   R+S ++VT+ +LI GFCK G++  A  +   +    +EP+++ YTT ++ + 
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + G+    +  L +M  + +      Y V+I GLC   KL+EA +++EDM    + PD +
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            + T++ ++ K   ++ A  + +++     EP     + +IDG+  NG L  A  +   +
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA-IVYFCI 398

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
           ++ N     V YT +I A C EGD  +    F ++ E G                     
Sbjct: 399 EKAN----DVMYTVLIDALCKEGDFIEVERLFSKISEAGL-------------------- 434

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            PD+ +    +    + G+L   F+L   M++ GLL D
Sbjct: 435 VPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 214/444 (48%), Gaps = 10/444 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKE---LDLKVSIQTYNSLLYNLRHTDIMWDL--YDDIKVSETP 60
           + R G +  A  V+  ++       K  I ++NSL        ++ ++  Y  + +    
Sbjct: 101 HCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCS 160

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            NV T S  ID  C+   LQ A+            P+VV+   ++  YCK G  EVA  L
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           +  M +  +  +  +Y  LI G C  G M+ A E  + M    VEP+++ Y+ +  GF  
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
                 A K + K+L +G   DI  Y V+I G C  G ++E  ++ E M       +++ 
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++ ++++  KSGR+  A+ + +++   G +PD+V  S +I G+ K  ++H+AI  +   C
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF---C 397

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            ++   N   +  ++  LC++    E    F  +  +  + D  +Y   I G  K GN+ 
Sbjct: 398 IEK--ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLV 455

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A +L  +++++ +   ++ + +LIYG    G + +AR++ D +   G+ P +  +   +
Sbjct: 456 DAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLI 515

Query: 421 NAYCEEGNIQRLLALLQEMETKAI 444
            AY +EGN+     LL +M+ + +
Sbjct: 516 RAYEKEGNMAAASDLLLDMQRRGL 539



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 218/438 (49%), Gaps = 53/438 (12%)

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           LK    ++S+G+  +  +++ ++S +CK G++  A  +++ M   G +PD+++Y+ LI G
Sbjct: 41  LKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDG 100

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
            C+   +  A  +   + +        +HG I                        C  D
Sbjct: 101 HCRNGDIRSASLVLESLRA--------SHGFI------------------------CKPD 128

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           +V +N + +G+ K+  + E V +Y  ++ K  SP++VT+++ I  FCK+G++  A +   
Sbjct: 129 IVSFNSLFNGFSKMKMLDE-VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFH 187

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
           ++K   L P+ VT+T  ++ YC+ G+++  ++L +EM    +    VTYT +I G CK+ 
Sbjct: 188 SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKG 247

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           ++Q A ++   M    V P+ + Y TII  F +  D   A + L +M    +      Y 
Sbjct: 248 EMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           ++I GLC NG LK A  ++  +++ ++    V +TT++ A+   G +  A+  + +++E+
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367

Query: 583 GFEISIRDYTKS---------------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           GFE  +   +                 +FC+  +N       +  V++ A  + GD   V
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV-----MYTVLIDALCKEGDFIEV 422

Query: 628 FELAAVMIKSGLLPDKFL 645
             L + + ++GL+PDKF+
Sbjct: 423 ERLFSKISEAGLVPDKFM 440


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 258/525 (49%), Gaps = 42/525 (8%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNV 63
           ++ G    A  VI K++     V++  +N+ L +L      +  W +Y ++       NV
Sbjct: 104 TQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENV 163

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T +++I  L ++ RL +A+  +  +                                  
Sbjct: 164 NTFNLIIYALGKEGRLVEAVSVIYRS---------------------------------- 189

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM---GRHGVEPDAITYSILAKGFHL 180
            LK G+ P+  ++N++I G    G+M+ AL+    M       V+PD++TY+    GF  
Sbjct: 190 -LKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCK 248

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +  ++ A +  +++L K  +P++ TY  L+ GY ++G++E   +L + ++ +G   N + 
Sbjct: 249 IGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVI 308

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ ++  +   G ++ A  LL +M    + PD  TYSI+I GLC+   +++A +    + 
Sbjct: 309 YNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMIL 368

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
              +  ++F+H  ++  LC    +  A+    ++ +   + DVV +  +ID + K G + 
Sbjct: 369 EMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVE 428

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A+Q+Y ++I+    P+++ +NS+I GF K G    A  L+DT++  GL    VTY T +
Sbjct: 429 NAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLI 487

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + YC  G I +  AL  EM    I  +HVTY  +I  LCK   + +A +L++ M + G+ 
Sbjct: 488 HGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLI 547

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           PD +TY  +I SF K     +  +L + M L  + P   TY  ++
Sbjct: 548 PDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMV 592



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 135/543 (24%), Positives = 248/543 (45%), Gaps = 40/543 (7%)

Query: 138 ILIHGLCIAGSMEEALEFT-NDMGRHGVEP----DAI------------TYSILAKGFHL 180
           ++IH L  +   ++AL    N M  +G+ P    DA+             +  L +    
Sbjct: 46  VVIHVLVNSKRYDDALFIMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQ 105

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +    GA++VI KL + G    +  +   +    ++ +V    K+ + M+S G+  NV  
Sbjct: 106 IGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNT 165

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM- 299
           +++++ ++ K GR+ EA+ ++Y     G+ P++VT++++I G  K   +  A++L  +M 
Sbjct: 166 FNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKME 225

Query: 300 ----CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
               CS  + P+S  + + + G C+   +  A  +   ++      +V  Y  ++DGY +
Sbjct: 226 VMSGCS--VKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTR 283

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +G++  A +L  +L+EK + P+ V +NS+I+     G +  A  LL  +    + P   T
Sbjct: 284 VGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFT 343

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y+  +   C  G +      LQ +   ++     ++ VVI  LC+   L  A QLL +MY
Sbjct: 344 YSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMY 403

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
           V G+ PD +T+ T+I   CK   +  A Q+  +M     +P    YN +I+G    G   
Sbjct: 404 VRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFD 463

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT--- 592
            A  L+ +L+   +    V Y T+I  +C  G + +A   F +M   G   S   Y    
Sbjct: 464 PAILLIDTLRRMGL-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLI 522

Query: 593 ------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                       K    MM+  G  PD     +++ +F +      V EL   M+  G++
Sbjct: 523 NSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVV 582

Query: 641 PDK 643
           PD+
Sbjct: 583 PDR 585



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 134/573 (23%), Positives = 254/573 (44%), Gaps = 41/573 (7%)

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY--CK--------------- 110
           +VI  L    R  DA+  +           +  L+A++S Y  CK               
Sbjct: 46  VVIHVLVNSKRYDDALFIMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQ 105

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           +G  E A  +   +   G      ++N  +  L     +    +   +M  +G   +  T
Sbjct: 106 IGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNT 165

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL---RE 227
           ++++        ++  A  VI + L  G  P++VT+ ++I G  ++G ++  LKL    E
Sbjct: 166 FNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKME 225

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
           VM     K + + Y+  ++  CK G +  A     EM    ++P++ TY+ L+ G  +  
Sbjct: 226 VMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVG 285

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
            +  A +L +E+  K + PNS  + +I+  L  +  +  A +    +I      D   Y+
Sbjct: 286 SLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYS 345

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           I+I+G  + G + EA +  + ++E  +     + N +I   C++  +A A++LL  + + 
Sbjct: 346 IVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVR 405

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           GL P  VT+ T ++ +C++G ++  + + ++M      P  + Y  VI G  K+     A
Sbjct: 406 GLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPA 465

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           + L++ +  +G+  D +TYNT+I  +C C  + +AF L ++M    +  +  TYN LI+ 
Sbjct: 466 ILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINS 524

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC  G +  A  L+  +    +    V YT +I             T F +       I 
Sbjct: 525 LCKAGHVLQAKELMKMMVLRGLIPDYVTYTILI-------------TSFSKKCSPEEVIE 571

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
           + DY       M+  G  PD++  + M+I   Q
Sbjct: 572 LHDY-------MVLKGVVPDRQTYQTMVIPLLQ 597



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 155/322 (48%), Gaps = 4/322 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRN 62
           Y+R G + +A  +  ++ E  L  +   YNS+++ L     M     L  D+       +
Sbjct: 281 YTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPD 340

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
            +T SIVI+GLC+   L +A  FLQ            S N +++  C+      AK L  
Sbjct: 341 QFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLA 400

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   GL PD  ++  LI   C  G +E A++    M + G +P+ + Y+ +  GF    
Sbjct: 401 NMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEG 460

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
               A  +I  L   G   D+VTY  LI GYC  G +++   L   M + G   + + Y+
Sbjct: 461 SFDPAILLIDTLRRMGL-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYN 519

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L++S+CK+G + +A  L+  M   GL PD VTY+ILI    K+    + I+L++ M  K
Sbjct: 520 TLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLK 579

Query: 303 RISPNSFAHGAILLGLCEKEMI 324
            + P+   +  +++ L ++E +
Sbjct: 580 GVVPDRQTYQTMVIPLLQEESV 601



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 145/311 (46%), Gaps = 23/311 (7%)

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
           I++V  +N++I    K G + EAV +  + ++  I P++VTFN +I G  K G +  A +
Sbjct: 160 IENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALK 219

Query: 400 LLDTIKLHG---LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           L+  +++     ++P +VTY +F+N +C+ GN+       +EM  K I P   TY  ++ 
Sbjct: 220 LVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVD 279

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           G  +   L+ A +L +++   G+ P+ + YN+II       D+  A  LL+ M    + P
Sbjct: 280 GYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYP 339

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              TY+I+I+GLC NG L  A   L  + E ++     ++  +I   C   ++  A    
Sbjct: 340 DQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGA---- 395

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
                           K     M   G  PD      ++    + G + +  ++   MIK
Sbjct: 396 ----------------KQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIK 439

Query: 637 SGLLPDKFLIN 647
           +G  P+  + N
Sbjct: 440 TGEKPNLLIYN 450



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 121/302 (40%), Gaps = 58/302 (19%)

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           +N  +   +KL ++    ++Y++++      ++ TFN +IY   K G++ +A        
Sbjct: 131 WNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEA-------- 182

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
                  +V Y +                         I P  VT+ ++I G  K   + 
Sbjct: 183 ------VSVIYRSL---------------------KTGIWPNVVTFNMIIDGAIKMGAMD 215

Query: 466 EAVQLLEDMYVIG---VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            A++L+  M V+    V PD +TYN+ +  FCK  +L  A +   +M    +EP   TY 
Sbjct: 216 LALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYA 275

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            L+DG    G L+NA  L   L E  +    V Y +II     EGD+  A      M++K
Sbjct: 276 TLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDK 335

Query: 583 GFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                                  PDQ    +++    + G L   F+   ++++  L+ D
Sbjct: 336 RI--------------------YPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRD 375

Query: 643 KF 644
            F
Sbjct: 376 AF 377


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 159/629 (25%), Positives = 265/629 (42%), Gaps = 92/629 (14%)

Query: 47  MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMS 106
           M+D   D + +  P        ++       R Q+A+         +  P+    NA+  
Sbjct: 128 MFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQ 187

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
                G   +A  L+  M+  G  P++ +Y +L+ GLC  G   +AL+  ++M   G+ P
Sbjct: 188 VLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVP 247

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           D   Y++L        +I  A +++  +   G  PD VTYTV + G C+ G V+E     
Sbjct: 248 DVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRF 307

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           E++   GF L +I YS L+  + ++GR DE L    EM    + PD+  Y+ILIR   + 
Sbjct: 308 ELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEA 367

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            +   A  L +EM  K   P++F +  +L  L +   I  A+     ++ +N + D   +
Sbjct: 368 GRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTH 427

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF------------------ 388
           NIMI G  K G I +A+Q++ ++ E    P+++T+N+LI G                   
Sbjct: 428 NIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEM 487

Query: 389 ------------------------------CKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
                                         C++G+V  A +LL  I   G+ P  VTY T
Sbjct: 488 GNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNT 547

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +N  C+  N+   L L +E++ K I P  +TY  +I GL +  +  +A  L +++   G
Sbjct: 548 LINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSG 607

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL------HNLEPTSAT------------ 520
             P    YNT++RS C+ K L +A  L    WL      +NL P                
Sbjct: 608 GFPSLPIYNTMMRSLCRMKKLSQAINL----WLDYLPKKYNLSPEDEVIANARKCFEDGF 663

Query: 521 ----------------------YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
                                 Y I + GLC    + +A  +   L+E  I +T      
Sbjct: 664 LDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCAL 723

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           +I   C + +++ A+      + K F +S
Sbjct: 724 LINYLCWDRNLNAAVDIMMYTLSKRFIVS 752



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 162/650 (24%), Positives = 280/650 (43%), Gaps = 56/650 (8%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSE 58
           L   +S  G   +AV   ++M + D + +   YN++   L    ++     LY+ +  S 
Sbjct: 150 LVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSG 209

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              N  T  +++DGLC++    DA+    E   +   P V     ++S  C  G  E A 
Sbjct: 210 CLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAG 269

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L C M + G  PD  +Y + + GLC AG ++EA      +   G     I YS L  G 
Sbjct: 270 RLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGL 329

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               +         ++L K   PDI  YT+LI  + + G  ++   L + M  +GF  + 
Sbjct: 330 FQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDT 389

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+ LL ++   G ID A  L+ EM    +  D  T++I+I GLCK+  + KA+Q+++E
Sbjct: 390 FCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDE 449

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM-------------SNCIQDVVL 345
           M      P    + A++ GL    M+ EARM F  + M             +N ++D   
Sbjct: 450 MGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTES 509

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
              ++DG  + G + +A +L R +IE  + P +VT+N+LI G CK   +  A RL   ++
Sbjct: 510 LRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQ 569

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           L G+ P  +TY T ++             L Q +      P+   Y  +++ LC+  KL 
Sbjct: 570 LKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLS 629

Query: 466 EAVQL------------------------LEDMYVIGVTP-----DQI-------TYNTI 489
           +A+ L                         ED ++          DQ+        Y   
Sbjct: 630 QAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIW 689

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA-DCLLVSLQEHN 548
           +   C+ + +  A ++ + +    +  T A   +LI+ LC + +L  A D ++ +L +  
Sbjct: 690 VIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRF 749

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI--RDYTKSFF 596
           I    V    ++++ C     H A     +M   G+++ +  R+ TK   
Sbjct: 750 IVSQPVG-NRLLRSLCIRYRRHDAQALSWRMHLVGYDMDVYLREATKDLL 798



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 189/412 (45%), Gaps = 7/412 (1%)

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           + G      A+  L+ +   +GR  EA+     M     +P    Y+ + + L  +  + 
Sbjct: 137 AAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVIL 196

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A+ LYN M S    PNS  +  ++ GLC++ M  +A   FD ++    + DV +Y +++
Sbjct: 197 LALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLL 256

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
                 G I +A +L   + E    P  VT+   + G CK G+V +A    + ++  G  
Sbjct: 257 SSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFT 316

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
              + Y+  ++   + G     L+   EM  K+I P    YT++I+   +  + ++A  L
Sbjct: 317 LGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLL 376

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L++M   G  PD   YNT++++     ++ +A  L+++M  +N+   S T+NI+I GLC 
Sbjct: 377 LDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCK 436

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            G +  A  +   + EH    T + Y  +I      G + +A   F +M E G   S+  
Sbjct: 437 KGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM-EMGNNPSL-- 493

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
               F  + L      D E    ++    Q G +   ++L   +I+SG++PD
Sbjct: 494 ----FLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPD 541



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 106/270 (39%), Gaps = 18/270 (6%)

Query: 396 DARRLLDTI---KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           DA  + D +   +  GL   +  +   + A+   G  Q  +     M      PT   Y 
Sbjct: 124 DAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYN 183

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            V + L  +  +  A+ L   M   G  P+  TY  ++   CK      A ++ ++M   
Sbjct: 184 AVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLER 243

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            + P    Y +L+  LC  G +++A  LL S++E+     +V YT  +   C  G V +A
Sbjct: 244 GIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEA 303

Query: 573 MTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIA 617
              F  + + GF + +  Y+                S++  ML     PD  +  +++  
Sbjct: 304 FHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRR 363

Query: 618 FHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           F + G     F L   M   G +PD F  N
Sbjct: 364 FAEAGRTKDAFLLLDEMKDKGFVPDTFCYN 393


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 190/333 (57%)

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G  P    +++L  GF     +  A  V  ++  +G  P +V++  LI G C+ G+VEEG
Sbjct: 243 GYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEG 302

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
            +L+ VM S+G   +V  +S L++ +CK GR+DE   L  EM   GL P+ VT++ LI G
Sbjct: 303 FRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDG 362

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
            CK  KV  A++ +  M ++ + P+   + A++ GLC+   + EAR   + +  S    D
Sbjct: 363 QCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPD 422

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
            + +  +IDG  K G++  A+++ R+++E+ I    V F +LI G C+ G+V DA R+L 
Sbjct: 423 KITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLT 482

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G +P   TYT  ++ +C++G+++    LL+EM++    P  VTY  ++ GLCKQ 
Sbjct: 483 DMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQG 542

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           +++ A  LL+ M  +GV P+ ITYN ++    K
Sbjct: 543 QMKNAKMLLDAMLNVGVAPNDITYNILLDGHSK 575



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 192/349 (55%)

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           +E    L   +L  G+   +  ++VL+   CK+G +  A  +  E+   GL+P +V+++ 
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           LI G CK   V +  +L   M S+ + P+ F   A++ GLC++  + E  + FD +    
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
            + + V +  +IDG  K G +  A++ ++ ++ + + P +VT+N+LI G CK G + +AR
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 408

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           RL++ +   GL+P  +T+TT ++  C++G+++  L + + M  + I    V +T +I GL
Sbjct: 409 RLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGL 468

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           C++ ++ +A ++L DM   G  PD  TY  +I  FCK  D++  F+LL +M      P  
Sbjct: 469 CREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGV 528

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            TYN L++GLC  G +KNA  LL ++    ++   + Y  ++  H   G
Sbjct: 529 VTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 188/356 (52%)

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +I  +W +  ++L  G  P I  + VL+ G+C+ G+V     + + +  +G +  V++++
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+S  CKSG ++E   L   ME+ G+ PD+ T+S LI GLCK+ ++ +   L++EMC +
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN      ++ G C+   +  A   F  ++      D+V YN +I+G  K+G++ EA
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            +L  ++    + P  +TF +LI G CK+G +  A  +   +   G+E   V +T  ++ 
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISG 467

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C EG +     +L +M +    P   TYT+VI   CK+  ++   +LL++M   G  P 
Sbjct: 468 LCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPG 527

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
            +TYN ++   CK   ++ A  LL+ M    + P   TYNIL+DG   +G   + D
Sbjct: 528 VVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVD 583



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 180/335 (53%)

Query: 94  FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           + P +   N +M  +CK G    A+ +F  + K GL P   S+N LI G C +G +EE  
Sbjct: 244 YPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGF 303

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
                M   GV PD  T+S L  G     ++     +  ++  +G  P+ VT+T LI G 
Sbjct: 304 RLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQ 363

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+ G V+  LK  ++ML+QG + +++ Y+ L++ +CK G + EA  L+ EM A GLKPD 
Sbjct: 364 CKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDK 423

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           +T++ LI G CK   +  A+++   M  + I  +  A  A++ GLC +  + +A      
Sbjct: 424 ITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTD 483

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++ +    D   Y ++ID + K G++    +L +++      P +VT+N+L+ G CK G+
Sbjct: 484 MLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQ 543

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + +A+ LLD +   G+ P+ +TY   ++ + + G+
Sbjct: 544 MKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGS 578



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 156/299 (52%), Gaps = 20/299 (6%)

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           +  +N+++ G+ K G++G A  ++ ++ ++ + P++V+FN+LI G CK+G V +  RL  
Sbjct: 248 IYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKG 307

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            ++  G+ P   T++  +N  C+EG +     L  EM  + + P  VT+T +I G CK  
Sbjct: 308 VMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGG 367

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           K+  A++  + M   GV PD +TYN +I   CK  DL++A +L+N+M    L+P   T+ 
Sbjct: 368 KVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFT 427

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            LIDG C +GD+++A  +   + E  I L  VA+T +I   C EG VH A          
Sbjct: 428 TLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTD---- 483

Query: 583 GFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                           MLS GF PD     +++  F + GD+   F+L   M   G +P
Sbjct: 484 ----------------MLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVP 526



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 171/315 (54%), Gaps = 3/315 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP---RN 62
           + + G V +A  V  ++ +  L+ ++ ++N+L+     +  + + +    V E+     +
Sbjct: 258 FCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPD 317

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+T S +I+GLC++ RL +  L   E  G+   P+ V+   ++   CK G  ++A   F 
Sbjct: 318 VFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQ 377

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +ML  G+ PD  +YN LI+GLC  G ++EA    N+M   G++PD IT++ L  G     
Sbjct: 378 MMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDG 437

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A ++ ++++ +G + D V +T LI G C+ G V +  ++   MLS GFK +   Y+
Sbjct: 438 DMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYT 497

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           +++   CK G +     LL EM++ G  P +VTY+ L+ GLCKQ ++  A  L + M + 
Sbjct: 498 MVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNV 557

Query: 303 RISPNSFAHGAILLG 317
            ++PN   +  +L G
Sbjct: 558 GVAPNDITYNILLDG 572



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 167/366 (45%), Gaps = 23/366 (6%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEM-----EAVGLKPDLV---------TYSILIRGL--- 283
           +S +L +M +      ++GL+++         G  PD V          + + IRG    
Sbjct: 158 FSSILRTMPRHHHHHHSVGLVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENL 217

Query: 284 ------CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
                  +  ++ ++  LY E+      P  +    ++ G C+   +  AR+ FD +   
Sbjct: 218 LRRVVRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKR 277

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
                VV +N +I G  K G++ E  +L   +  + + P + TF++LI G CK G++ + 
Sbjct: 278 GLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEG 337

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             L D +   GL P+ VT+TT ++  C+ G +   L   Q M  + + P  VTY  +I G
Sbjct: 338 SLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALING 397

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LCK   L+EA +L+ +M   G+ PD+IT+ T+I   CK  D+  A ++  +M    +E  
Sbjct: 398 LCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELD 457

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
              +  LI GLC  G + +A  +L  +           YT +I   C +GDV        
Sbjct: 458 DVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLK 517

Query: 578 QMVEKG 583
           +M   G
Sbjct: 518 EMQSDG 523


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/507 (26%), Positives = 249/507 (49%), Gaps = 15/507 (2%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           ++ W +  ++K S    +    S++I+   +    + A+         +  P + + N I
Sbjct: 110 ELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLI 169

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +    +     +A  ++  MLK  L+PD  +Y ILIHGLC     ++AL   ++M   G+
Sbjct: 170 LHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGI 229

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            P+ I YSI+  G     +I  A ++  K+   G + D++TY VL+ G+C+ G +++   
Sbjct: 230 LPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFT 289

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L +++   G  L VI Y  L++ + ++ R +EA     +M    +KPD++ Y+I+IRGL 
Sbjct: 290 LLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLS 349

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           ++ +V +A+ L  EM  + + P++  + A++ G C+   + EA      +   +C  +  
Sbjct: 350 QEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNH 409

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            Y+I+I G  K G I +A  +++++ +    PS+VTFNSLI G CK  ++ +AR L   +
Sbjct: 410 TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469

Query: 405 KLHGLEPS--------------AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           ++   +PS                +    M   CE G I +   LL ++    + P   T
Sbjct: 470 EIVR-KPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRT 528

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y ++I G CK   +  A +L ++M + G  PD +TY T+I    +      A ++  QM 
Sbjct: 529 YNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMV 588

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNA 537
                P S+TY  ++   C   ++  A
Sbjct: 589 KKGCVPESSTYKTIMTWSCRENNISLA 615



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 280/602 (46%), Gaps = 25/602 (4%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPR 61
            YS  GM   AV     M++ D K  +  +N +L+ L   +   +   +Y+ +       
Sbjct: 137 AYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNP 196

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T  I+I GLC+  + QDA++   E   +   P+ +  + ++S  C+      A+ LF
Sbjct: 197 DVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLF 256

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G + D  +YN+L++G C +G +++A      + + G     I Y  L  G    
Sbjct: 257 SKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRA 316

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A    QK+L +   PD++ YT++I G  Q G V E L L   M  +G + + I Y
Sbjct: 317 RRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICY 376

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C  G +DEA  L  E+      P+  TYSILI G+CK   ++KA  ++ EM  
Sbjct: 377 NALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEK 436

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYF--------DSLIM-----SNCIQDVVLYNI 348
               P+     +++ GLC+   + EAR+ F         SL +     ++ + D+    +
Sbjct: 437 LGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQV 496

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           M++   + G I +A +L  QL++  + P I T+N LI GFCK G +  A +L   ++L G
Sbjct: 497 MMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKG 556

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
             P +VTY T ++     G  +  L + ++M  K   P   TY  ++   C++  +  A+
Sbjct: 557 HMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLAL 616

Query: 469 QL----LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            +    L D    G   +++    +  SF   ++L+ A + L +M + +     A Y I 
Sbjct: 617 SVWMKYLRDFR--GWEDEKV--RVVAESF-DNEELQTAIRRLLEMDIKSKNFDLAPYTIF 671

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           + GL        A  +   L++  ++++  +   +I   C   ++  AM  F   +E+GF
Sbjct: 672 LIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGF 731

Query: 585 EI 586
            +
Sbjct: 732 RL 733



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 225/503 (44%), Gaps = 68/503 (13%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           WKV+Q+L           ++VLI  Y + G  E+ ++   +M     K ++ A++++L  
Sbjct: 113 WKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHF 172

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           + +      AL +  +M    L PD+VTY ILI GLCK  K   A+ L++EM  + I PN
Sbjct: 173 LVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPN 232

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK------------ 355
              +  +L GLC+ + I +A+  F  +  S C +D++ YN++++G+ K            
Sbjct: 233 QIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQ 292

Query: 356 --------LGNIG---------------EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
                   LG IG               EA   Y++++ + I P ++ +  +I G  + G
Sbjct: 293 LLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEG 352

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           +V +A  LL  +   GL P  + Y   +  +C+ G +    +L  E+      P + TY+
Sbjct: 353 RVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYS 412

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM--- 509
           ++I G+CK   + +A  + ++M  +G  P  +T+N++I   CK   L +A  L  QM   
Sbjct: 413 ILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIV 472

Query: 510 -----WLHNLEPTSATYNI-----LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
                +L   + T   ++I     +++ LC +G +  A  LL+ L +  +      Y  +
Sbjct: 473 RKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNIL 532

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
           I   C  G+++ A   F +M  KG                      PD      ++   +
Sbjct: 533 INGFCKFGNINGAFKLFKEMQLKGHM--------------------PDSVTYGTLIDGLY 572

Query: 620 QGGDLGSVFELAAVMIKSGLLPD 642
           + G      E+   M+K G +P+
Sbjct: 573 RAGRNEDALEIFEQMVKKGCVPE 595



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 122/290 (42%), Gaps = 24/290 (8%)

Query: 362 AVQLYRQLIEK----RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           A +LY +++++     I  S   F+ LI  + + G    A      ++    +P    + 
Sbjct: 108 AFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFN 167

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++    +      LA+  +M    + P  VTY ++I GLCK  K Q+A+ L ++M   
Sbjct: 168 LILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDR 227

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ P+QI Y+ ++   C+ K +  A +L ++M          TYN+L++G C +G L +A
Sbjct: 228 GILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDA 287

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             LL  L +    L  + Y  +I          +A  ++ +M+ +  +            
Sbjct: 288 FTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK------------ 335

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                   PD  +  +M+    Q G +     L   M + GL PD    N
Sbjct: 336 --------PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYN 377



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/346 (21%), Positives = 133/346 (38%), Gaps = 85/346 (24%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPR--- 61
           + G+++ A  +  +M++L    S+ T+NSL+  L   + + +   L+  +++   P    
Sbjct: 420 KNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFL 479

Query: 62  ----------NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
                     ++ +  ++++ LC+   +  A   L +       P + + N +++ +CK 
Sbjct: 480 RLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKF 539

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G    A  LF  M   G  PD+ +Y  LI GL  AG  E+ALE    M + G  P++ TY
Sbjct: 540 GNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTY 599

Query: 172 SILAKGFHLLSQISGAWKV-------------------------------IQKLL---IK 197
             +       + IS A  V                               I++LL   IK
Sbjct: 600 KTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIK 659

Query: 198 GSDPDIVTYTVLICGY-----------------------------------CQIGNVEEG 222
             + D+  YT+ + G                                    C + N++  
Sbjct: 660 SKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMA 719

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           + +    L +GF+L     + LL ++    R D+AL L   MEA G
Sbjct: 720 MDVFLFTLERGFRLMPPICNQLLCNLLHLDRKDDALFLANRMEASG 765


>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 831

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 141/545 (25%), Positives = 254/545 (46%), Gaps = 23/545 (4%)

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           +++ Y K G    A+  F  M   G+ P+  SY  LIH   +A  +  A+    +M   G
Sbjct: 198 LVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEG 257

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           V P+A TYS++  G+  L  +  A +  Q+ L +    + V Y  +I  YC+ GN+E   
Sbjct: 258 VSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAE 317

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA---VGLKPDLVTYSILI 280
            +   M  QG +  +  Y++L+        +D+ L +   ++A    GL P +V+Y  LI
Sbjct: 318 AIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLI 377

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
               K  K+ KA+Q+ NEM  + I  N   +  I+ G  +      A   F+ +  +   
Sbjct: 378 NLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIK 437

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            D + YNI+++ + K G +  A++L  ++      P++ T+  +I GF K G +  A   
Sbjct: 438 PDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFET 497

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           +  +K+ G  PSA TY   M+   + G + R  +++ EM    + P   +YT +I+G   
Sbjct: 498 VRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYAC 557

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
              +  A +    +  +G+ PD I Y +++++ CK   ++    +  +M    +   +  
Sbjct: 558 IGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYI 617

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           YNIL+DG    GD+  A  ++  ++   ++    +YT+ I A C  GD+ KA     QM 
Sbjct: 618 YNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMK 677

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
           ++G + +++ YT +      S  +P      E  LI + +             M  +G++
Sbjct: 678 QQGVQPNLQAYT-TLIHGWASASYP------EKALICYDE-------------MKSAGMI 717

Query: 641 PDKFL 645
           PDK L
Sbjct: 718 PDKPL 722



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 120/537 (22%), Positives = 247/537 (45%), Gaps = 12/537 (2%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLY------DDI 54
           +L   Y + G  H A      M+   ++ ++ +Y +L++      +  DL       +++
Sbjct: 197 LLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYA---VAQDLRGAIACVEEM 253

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           +      N  T S++I G  +   ++ A  + Q    + +  + V  N I+  YCK G  
Sbjct: 254 EAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNM 313

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH---GVEPDAITY 171
           E A+ +   M + GL      YN+L+ G     ++++ L     +      G+ P  ++Y
Sbjct: 314 ERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSY 373

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
             L   +  L ++  A ++  ++  +G   +  TY+++I GY Q+G+      + E M +
Sbjct: 374 GCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSN 433

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
            G K + I Y++L+++ CK+G+++ AL LL  ME+    P L TY+I+I G  K   +  
Sbjct: 434 AGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRM 493

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A +   +M      P++  +  I+ GL +   +  A    D ++++    +   Y  +I+
Sbjct: 494 AFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIE 553

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           GY  +G++G A + + ++ E  + P ++ + SL+   CK G++     +   +   G+  
Sbjct: 554 GYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPM 613

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           +   Y   ++ + + G++     ++Q+M  + + P   +YT  I   CK   + +A + +
Sbjct: 614 NNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETI 673

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           E M   GV P+   Y T+I  +       KA    ++M    + P    Y+ ++  L
Sbjct: 674 EQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSL 730



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/406 (22%), Positives = 175/406 (43%), Gaps = 58/406 (14%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           +++L++   K G    A      M A G++P++ +Y+ LI        +  AI    EM 
Sbjct: 195 HTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEME 254

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           ++ +SPN+                                     Y+++I GY +LG++ 
Sbjct: 255 AEGVSPNA-----------------------------------ATYSVIISGYGRLGDVE 279

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A + +++ + +    + V +N++I+ +CK G +  A  ++  ++  GLE +   Y   M
Sbjct: 280 AAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLM 339

Query: 421 NAYCEEGNIQRLLALLQEMETK---AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           + Y     + + L + + ++ +    + PT V+Y  +I    K  K+ +A+Q+  +M   
Sbjct: 340 DGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQ 399

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+  ++ TY+ II  + +  D   AF +   M    ++P   TYNIL++  C NG +  A
Sbjct: 400 GIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRA 459

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             LL  ++  +   T   YT II      GD+  A           FE ++RD       
Sbjct: 460 LELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMA-----------FE-TVRD------- 500

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
            M   GF P      V++    Q G +     +   M+ +G+ P++
Sbjct: 501 -MKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNE 545



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 139/324 (42%), Gaps = 23/324 (7%)

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           AR  F+S+  +    +V  Y  +I  Y    ++  A+    ++  + +SP+  T++ +I 
Sbjct: 211 ARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIIS 270

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G+ + G V  A R            + V Y   ++AYC+ GN++R  A++  ME + +  
Sbjct: 271 GYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEA 330

Query: 447 THVTYTVVIKGL--CKQW-KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           T   Y +++ G   C+   K     + L+     G++P  ++Y  +I  + K   + KA 
Sbjct: 331 TLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKAL 390

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           Q+ N+M    ++    TY+++IDG    GD  NA  +   +    I    + Y  ++ A 
Sbjct: 391 QISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAF 450

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           C  G +++A+    +M       ++R YT                    +++  F + GD
Sbjct: 451 CKNGQMNRALELLARMESGDCPPTLRTYT--------------------IIIDGFMKIGD 490

Query: 624 LGSVFELAAVMIKSGLLPDKFLIN 647
           L   FE    M  +G  P     N
Sbjct: 491 LRMAFETVRDMKMAGFRPSAATYN 514



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 119/274 (43%), Gaps = 27/274 (9%)

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           DAR+++D  K    +P    +T  +N Y + G+     A  + M    I P   +YT +I
Sbjct: 176 DARKVVDAFK-RIKKPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLI 234

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA---FQ-LLNQMWL 511
                   L+ A+  +E+M   GV+P+  TY+ II  + +  D+  A   FQ  L++ W 
Sbjct: 235 HAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWH 294

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
           HN       YN +I   C  G+++ A+ ++ +++E  +  T   Y  ++  +     V K
Sbjct: 295 HN----DVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDK 350

Query: 572 AMTFFCQM---VEKGFEISIRDY----------TKSFFCMMLSN-----GFPPDQEICEV 613
            +  F ++    E G   ++  Y           K    + +SN     G   +++   +
Sbjct: 351 CLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSM 410

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           ++  + Q GD  + F +   M  +G+ PD    N
Sbjct: 411 IIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYN 444


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 233/479 (48%), Gaps = 44/479 (9%)

Query: 62  NVYTNSIVIDGL----CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           NV  NSI+ D L       SR +      + +    +  S +S   +M    K   +   
Sbjct: 148 NVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADV 207

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + ++  M++  + P+ F++N++I+ LC  G M +A +   DM  +G  P+ ++Y+ L  G
Sbjct: 208 EYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDG 267

Query: 178 FHLLSQISGAWK---VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
           +  L      +K   V+++++     P++ T+ +LI G+ +  N+   +K+ + ML Q  
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           K NVI+Y+ L++ +C  G+I EA+ +  +M + G++P+L+TY+ LI G CK D       
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKND------- 380

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
                                       M+ EA   F S+     +    +YN++ID Y 
Sbjct: 381 ----------------------------MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           KLG I +   L  ++  + I P + T+N LI G C+NG +  A++L D +   GL P  V
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLV 471

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           T+   M  YC +G  ++   LL+EM    + P H+TY +V+KG CK+  L+ A  +   M
Sbjct: 472 TFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531

Query: 475 -YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
                +  +  +YN +++ + +   L  A  LLN+M    L P   TY I+ + +   G
Sbjct: 532 EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 206/382 (53%), Gaps = 5/382 (1%)

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           V ++++ +   P++ T+ V+I   C+ G + +   + E M   G   NV++Y+ L+   C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269

Query: 250 K---SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           K   +G++ +A  +L EM    + P+L T++ILI G  K D +  +++++ EM  + + P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N  ++ +++ GLC    I+EA    D ++ +    +++ YN +I+G+ K   + EA+ ++
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             +  +   P+   +N LI  +CK GK+ D   L + ++  G+ P   TY   +   C  
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           GNI+    L  ++ +K + P  VT+ ++++G C++ + ++A  LL++M  +G+ P  +TY
Sbjct: 450 GNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWL-HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           N +++ +CK  +L+ A  +  QM     L    A+YN+L+ G    G L++A+ LL  + 
Sbjct: 509 NIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568

Query: 546 EHNISLTKVAYTTIIKAHCAEG 567
           E  +   ++ Y  + +    +G
Sbjct: 569 EKGLVPNRITYEIVKEEMVDQG 590



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 222/442 (50%), Gaps = 29/442 (6%)

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +L+  Y      E G +  +     G+KL+ ++   L+ ++ K  R  +   +  EM   
Sbjct: 158 MLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRR 217

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
            ++P++ T++++I  LCK  K++KA  +  +M     SPN  ++  ++ G C  ++    
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC--KLGGNG 275

Query: 328 RMYFDSLIMSNCIQDVV-----LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
           +MY    ++   +++ V      +NI+IDG+ K  N+  +++++++++++ + P+++++N
Sbjct: 276 KMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYN 335

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           SLI G C  GK+++A  + D +   G++P+ +TY   +N +C+   ++  L +   ++ +
Sbjct: 336 SLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
              PT   Y ++I   CK  K+ +   L E+M   G+ PD  TYN +I   C+  ++  A
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            +L +Q+    L P   T++IL++G C  G+ + A  LL  + +  +    + Y  ++K 
Sbjct: 456 KKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514

Query: 563 HCAEGDVHKAMTFFCQM-VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQG 621
           +C EG++  A     QM  E+   +++  Y                     V+L  + Q 
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYN--------------------VLLQGYSQK 554

Query: 622 GDLGSVFELAAVMIKSGLLPDK 643
           G L     L   M++ GL+P++
Sbjct: 555 GKLEDANMLLNEMLEKGLVPNR 576



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 213/412 (51%), Gaps = 6/412 (1%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           +LL   R  D+ + +Y ++   +   NV+T ++VI+ LC+  ++  A   +++       
Sbjct: 197 ALLKENRSADVEY-VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCS 255

Query: 96  PSVVSLNAIMSRYCKLGFAEV---AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           P+VVS N ++  YCKLG       A  +   M++  + P+  ++NILI G     ++  +
Sbjct: 256 PNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGS 315

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           ++   +M    V+P+ I+Y+ L  G     +IS A  +  K++  G  P+++TY  LI G
Sbjct: 316 MKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALING 375

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           +C+   ++E L +   +  QG       Y++L+ + CK G+ID+   L  EME  G+ PD
Sbjct: 376 FCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           + TY+ LI GLC+   +  A +L++++ SK + P+      ++ G C K    +A M   
Sbjct: 436 VGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLK 494

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL-IEKRISPSIVTFNSLIYGFCKN 391
            +         + YNI++ GY K GN+  A  +  Q+  E+R+  ++ ++N L+ G+ + 
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQK 554

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           GK+ DA  LL+ +   GL P+ +TY        ++G +  +   L  + TK+
Sbjct: 555 GKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTKS 606



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 185/393 (47%), Gaps = 37/393 (9%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           +TG ++ A  V+  MK      ++ +YN+L                              
Sbjct: 235 KTGKMNKARDVMEDMKVYGCSPNVVSYNTL------------------------------ 264

Query: 68  IVIDGLCQ---QSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             IDG C+     ++  A   L+E    +  P++ + N ++  + K      +  +F  M
Sbjct: 265 --IDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L   + P+  SYN LI+GLC  G + EA+   + M   GV+P+ ITY+ L  GF     +
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +   +  +G+ P    Y +LI  YC++G +++G  L+E M  +G   +V  Y+ L
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++ +C++G I+ A  L  ++ + GL PDLVT+ IL+ G C++ +  KA  L  EM    +
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAV 363
            P    +  ++ G C++  +  A      +     ++ +V  YN+++ GY + G + +A 
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
            L  +++EK + P+ +T+  +       G V D
Sbjct: 562 MLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 136/507 (26%), Positives = 249/507 (49%), Gaps = 15/507 (2%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           ++ W +  ++K S    +    S++I+   +    + A+         +  P + + N I
Sbjct: 110 ELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLI 169

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +    +     +A  ++  MLK  L+PD  +Y ILIHGLC     ++AL   ++M   G+
Sbjct: 170 LHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGI 229

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            P+ I YSI+  G     +I  A ++  K+   G + D++TY VL+ G+C+ G +++   
Sbjct: 230 LPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFT 289

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L +++   G  L VI Y  L++ + ++ R +EA     +M    +KPD++ Y+I+IRGL 
Sbjct: 290 LLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLS 349

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           ++ +V +A+ L  EM  + + P++  + A++ G C+   + EA      +   +C  +  
Sbjct: 350 QEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNH 409

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            Y+I+I G  K G I +A  +++++ +    PS+VTFNSLI G CK  ++ +AR L   +
Sbjct: 410 TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469

Query: 405 KLHGLEPS--------------AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
           ++   +PS                +    M   CE G I +   LL ++    + P   T
Sbjct: 470 EIVR-KPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRT 528

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y ++I G CK   +  A +L ++M + G  PD +TY T+I    +      A ++  QM 
Sbjct: 529 YNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMV 588

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNA 537
                P S+TY  ++   C   ++  A
Sbjct: 589 KKGCVPESSTYKTIMTWSCRENNISLA 615



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 158/610 (25%), Positives = 274/610 (44%), Gaps = 41/610 (6%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPR 61
            YS  GM   AV   + M++ D K  +  +N +L+ L   +   +   +Y+ +       
Sbjct: 137 AYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNP 196

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T  I+I GLC+  + QDA++   E   +   P+ +  + ++S  C+      A+ LF
Sbjct: 197 DVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLF 256

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G + D  +YN+L++G C +G +++A      + + G     I Y  L  G    
Sbjct: 257 SKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRA 316

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A    QK+L +   PD++ YT++I G  Q G V E L L   M  +G + + I Y
Sbjct: 317 RRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICY 376

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C  G +DEA  L  E+      P+  TYSILI G+CK   ++KA  ++ EM  
Sbjct: 377 NALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEK 436

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYF--------DSLIM-----SNCIQDVVLYNI 348
               P+     +++ GLC+   + EAR+ F         SL +     ++ + D+    +
Sbjct: 437 LGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQV 496

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           M++   + G I +A +L  QL++  + P I T+N LI GFCK G +  A +L   ++L G
Sbjct: 497 MMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKG 556

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
             P +VTY T ++     G  +  L + ++M  K   P   TY  ++   C++  +  A+
Sbjct: 557 HMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLAL 616

Query: 469 QLL------------EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
            +             E + V+  + D     T IR   +     K F L           
Sbjct: 617 SVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDL----------- 665

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
             A Y I + GL        A  +   L++  ++++  +   +I   C   ++  AM  F
Sbjct: 666 --APYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVF 723

Query: 577 CQMVEKGFEI 586
              +E+GF +
Sbjct: 724 LFTLERGFRL 733



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 225/503 (44%), Gaps = 68/503 (13%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           WKV+Q+L           ++VLI  Y + G  E+ ++   +M     K ++ A++++L  
Sbjct: 113 WKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHF 172

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           + +      AL +  +M    L PD+VTY ILI GLCK  K   A+ L++EM  + I PN
Sbjct: 173 LVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPN 232

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK------------ 355
              +  +L GLC+ + I +A+  F  +  S C +D++ YN++++G+ K            
Sbjct: 233 QIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQ 292

Query: 356 --------LGNIG---------------EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
                   LG IG               EA   Y++++ + I P ++ +  +I G  + G
Sbjct: 293 LLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEG 352

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           +V +A  LL  +   GL P  + Y   +  +C+ G +    +L  E+      P + TY+
Sbjct: 353 RVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYS 412

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM--- 509
           ++I G+CK   + +A  + ++M  +G  P  +T+N++I   CK   L +A  L  QM   
Sbjct: 413 ILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIV 472

Query: 510 -----WLHNLEPTSATYNI-----LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
                +L   + T   ++I     +++ LC +G +  A  LL+ L +  +      Y  +
Sbjct: 473 RKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNIL 532

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH 619
           I   C  G+++ A   F +M  KG                      PD      ++   +
Sbjct: 533 INGFCKFGNINGAFKLFKEMQLKGHM--------------------PDSVTYGTLIDGLY 572

Query: 620 QGGDLGSVFELAAVMIKSGLLPD 642
           + G      E+   M+K G +P+
Sbjct: 573 RAGRNEDALEIFEQMVKKGCVPE 595



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 122/290 (42%), Gaps = 24/290 (8%)

Query: 362 AVQLYRQLIEK----RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           A +LY +++++     I  S   F+ LI  + + G    A      ++    +P    + 
Sbjct: 108 AFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFN 167

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++    +      LA+  +M    + P  VTY ++I GLCK  K Q+A+ L ++M   
Sbjct: 168 LILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDR 227

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ P+QI Y+ ++   C+ K +  A +L ++M          TYN+L++G C +G L +A
Sbjct: 228 GILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDA 287

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             LL  L +    L  + Y  +I          +A  ++ +M+ +  +            
Sbjct: 288 FTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK------------ 335

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                   PD  +  +M+    Q G +     L   M + GL PD    N
Sbjct: 336 --------PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYN 377



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/346 (21%), Positives = 134/346 (38%), Gaps = 85/346 (24%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPR--- 61
           + G+++ A  +  +M++L    S+ T+NSL+  L   + + +   L+  +++   P    
Sbjct: 420 KNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFL 479

Query: 62  ----------NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
                     ++ +  ++++ LC+   +  A   L +       P + + N +++ +CK 
Sbjct: 480 RLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKF 539

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G    A  LF  M   G  PD+ +Y  LI GL  AG  E+ALE    M + G  P++ TY
Sbjct: 540 GNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTY 599

Query: 172 SILAKGFHLLSQISGA-------------WK------------------VIQKLL---IK 197
             +       + IS A             W+                   I++LL   IK
Sbjct: 600 KTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIK 659

Query: 198 GSDPDIVTYTVLICGY-----------------------------------CQIGNVEEG 222
             + D+  YT+ + G                                    C + N++  
Sbjct: 660 SKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMA 719

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           + +    L +GF+L     + LL ++    R D+AL L   MEA G
Sbjct: 720 MDVFLFTLERGFRLMPPICNQLLCNLLHLDRKDDALFLANRMEASG 765


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 224/455 (49%), Gaps = 17/455 (3%)

Query: 76  QSRLQD-AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
            +R  D A+   +E     F P+  + N ++  +CK G    A  +F  M   GL P+A 
Sbjct: 2   SARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAS 61

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           + N L+ GLC  G M  AL+   +M      P + +++IL +GF +  +   A +  +++
Sbjct: 62  TMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEM 118

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
              G +PD+ +Y +L+      G + E   L   M       +++ Y+VL+   CK G+ 
Sbjct: 119 KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSP---DIMTYNVLMDGYCKIGQT 175

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            EA  L+ E+   G +P++ TYSI+I   CK DKV +A +++ +M      PN+     +
Sbjct: 176 YEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL 235

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV-KLGNIGEAVQLYRQLIEKR 373
           + G C+  M+ +A   F  +    C   +V YN +ID    K G +  AV L+ +L    
Sbjct: 236 IAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG 295

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           ++P+IVT+NSLI GF +  +  D  RLL  +   G +P  +TY   ++  C    ++   
Sbjct: 296 LTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQ 353

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            L   M   A  P   T+  +I+GLC Q K++EA  +L+ M      PD  T+NTII +F
Sbjct: 354 RLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRM----TAPDMTTFNTIILAF 406

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           CK   +  A +++  M  H   P + T   L  G+
Sbjct: 407 CKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGI 441



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 228/452 (50%), Gaps = 26/452 (5%)

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
           F EV  GLF         P+A +YN+LI G C  G M +A+   +DM   G+ P+A T +
Sbjct: 13  FKEVLAGLFA--------PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  G   + Q+S A K+ +++      P   ++ +L+ G+   G   E  K    M + 
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFK---EMKAS 121

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G + ++ +Y +LLS++  SGR+ EA  L     A+   PD++TY++L+ G CK  + ++A
Sbjct: 122 GVEPDLESYHILLSALSDSGRMAEAHALF---SAMTCSPDIMTYNVLMDGYCKIGQTYEA 178

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
             L  E+      PN F +  I+   C+ + + EA   F  +I SNC+ + V +N +I G
Sbjct: 179 QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAG 238

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC-KNGKVADARRLLDTIKLHGLEP 411
           + K G + +A++L+ ++ +     +IVT+N+LI   C K G V  A  L + ++  GL P
Sbjct: 239 FCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTP 298

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + VTY + +  + E  N    L LL  M  +   P  +TY  +I GLC   ++++A +L 
Sbjct: 299 TIVTYNSLIQGFSERANDG--LRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF 356

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
             M      P+  T+N +IR  C  K + +A  +L++M      P   T+N +I   C  
Sbjct: 357 NGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMT----APDMTTFNTIILAFCKA 409

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           G + +A  ++  + +H        YTT   AH
Sbjct: 410 GAMHDAREVMKDMLKHGFYPN--TYTTYALAH 439



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 208/422 (49%), Gaps = 21/422 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRN 62
           + + G +H AV V + MK   L  +  T N+LL  L     M     L+ +++       
Sbjct: 35  FCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPT 94

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +++I++ G     R   AI F +E       P + S + ++S     G    A  LF 
Sbjct: 95  SASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFS 151

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M      PD  +YN+L+ G C  G   EA     ++ + G EP+  TYSI+   +  L 
Sbjct: 152 AMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLD 208

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  AW+V  K++     P+ VT+  LI G+C+ G +E+ +KL   M   G K  ++ Y+
Sbjct: 209 KVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYN 268

Query: 243 VLLSSMCKS-GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            L+ S+CK  G +  A+ L  ++E  GL P +VTY+ LI+G    ++ +  ++L   M +
Sbjct: 269 TLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF--SERANDGLRLLCHMHA 326

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +   P+   +  ++ GLC    + +A+  F+ +    C  +V  +N +I G      + E
Sbjct: 327 EGCKPDVITYNCLISGLCSANRVEDAQRLFNGMA---CAPNVTTFNFLIRGLCAQKKVEE 383

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A    R ++++  +P + TFN++I  FCK G + DAR ++  +  HG  P+  TYTT+  
Sbjct: 384 A----RNILDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPN--TYTTYAL 437

Query: 422 AY 423
           A+
Sbjct: 438 AH 439



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 209/434 (48%), Gaps = 51/434 (11%)

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A ++ +++L     P+  TY VLI G+C+ G + + + +   M S G   N    + LL 
Sbjct: 9   ALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLL 68

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +C+ G++  AL L  EM+A    P   +++IL+RG        +AI+ + EM +  + P
Sbjct: 69  GLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKASGVEP 125

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN-------- 358
           +  ++  +L  L +   + EA   F ++    C  D++ YN+++DGY K+G         
Sbjct: 126 DLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLM 182

Query: 359 ---------------------------IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
                                      + EA +++ ++IE    P+ VTFN+LI GFCK 
Sbjct: 183 KEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKA 242

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE-GNIQRLLALLQEMETKAIGPTHVT 450
           G + DA +L   ++  G + + VTY T +++ C++ G +   + L  ++E   + PT VT
Sbjct: 243 GMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVT 302

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  +I+G  +  +  + ++LL  M+  G  PD ITYN +I   C    +  A +L N M 
Sbjct: 303 YNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMA 360

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
                P   T+N LI GLC    ++ A  +L  +   +++     + TII A C  G +H
Sbjct: 361 ---CAPNVTTFNFLIRGLCAQKKVEEARNILDRMTAPDMT----TFNTIILAFCKAGAMH 413

Query: 571 KAMTFFCQMVEKGF 584
            A      M++ GF
Sbjct: 414 DAREVMKDMLKHGF 427



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 211/428 (49%), Gaps = 20/428 (4%)

Query: 32  QTYNSLLYNLRHTDIMW---DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
            TYN L+        M     ++ D+K S    N  T + ++ GLC+  ++  A+   +E
Sbjct: 26  HTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFRE 85

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
                F P+  S N ++  +   G    A   F  M   G+ PD  SY+IL+  L  +G 
Sbjct: 86  MQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKASGVEPDLESYHILLSALSDSGR 142

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           M EA    + M      PD +TY++L  G+  + Q   A  +++++L  G +P++ TY++
Sbjct: 143 MAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSI 199

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           +I  YC++  VEE  ++   M+      N + ++ L++  CK+G +++A+ L  EME +G
Sbjct: 200 IINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIG 259

Query: 269 LKPDLVTYSILIRGLC-KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
            K  +VTY+ LI  LC K+  V+ A+ L+N++    ++P    + +++ G  E+    + 
Sbjct: 260 CKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERA--NDG 317

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                 +    C  DV+ YN +I G      + +A +L+  +     +P++ TFN LI G
Sbjct: 318 LRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMA---CAPNVTTFNFLIRG 374

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP- 446
            C   KV +AR +LD +      P   T+ T + A+C+ G +     ++++M      P 
Sbjct: 375 LCAQKKVEEARNILDRMT----APDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPN 430

Query: 447 THVTYTVV 454
           T+ TY + 
Sbjct: 431 TYTTYALA 438



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 165/367 (44%), Gaps = 55/367 (14%)

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D+AL L  E+ A    P+  TY++LIRG CK  ++H+A+ ++++M S  + PN+     +
Sbjct: 7   DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           LLGLCE                                   +G +  A++L+R++     
Sbjct: 67  LLGLCE-----------------------------------IGQMSSALKLFREMQAGPF 91

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P+  + N L+ GF   G+   A      +K  G+EP   +Y   ++A  + G +    A
Sbjct: 92  LPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHA 148

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L   M      P  +TY V++ G CK  +  EA  L++++   G  P+  TY+ II  +C
Sbjct: 149 LFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYC 205

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K   + +A+++  +M   N  P + T+N LI G C  G L++A  L   +++     T V
Sbjct: 206 KLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIV 265

Query: 555 AYTTIIKAHCAE-GDVHKAMTFFCQMVEKGFEISIRDYTK-------------SFFCMML 600
            Y T+I + C + G V+ A+  F ++   G   +I  Y                  C M 
Sbjct: 266 TYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGLRLLCHMH 325

Query: 601 SNGFPPD 607
           + G  PD
Sbjct: 326 AEGCKPD 332



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 3/129 (2%)

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           K  +A++L +++      P+  TYN +IR FCK   + +A  + + M    L P ++T N
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            L+ GLC  G + +A  L   +Q      T  ++  +++     G   +A+ FF +M   
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKAS 121

Query: 583 GFEISIRDY 591
           G E  +  Y
Sbjct: 122 GVEPDLESY 130


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 207/387 (53%)

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G+  +  T +IL   F   SQ+S A   + K++  G +PDIVT+  L+ G+C+   + + 
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDA 170

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           L + + M+  G++ NV+ Y+ ++  +CKS ++D AL LL  ME  G++PD VTY+ LI G
Sbjct: 171 LYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISG 230

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           LC   +   A ++ + M  + I P+ F   A++    ++  I+EA   ++ +I  +   D
Sbjct: 231 LCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPD 290

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           +V Y+++I G      + EA Q++  ++ K   P +VT++ LI G+CK+ KV    +L  
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G+  + VTYT  +  YC  G +     + + M    + P  +TY V++ GLC   
Sbjct: 351 EMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNG 410

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           K+++A+ +L DM   G+  D +TYN IIR  CK  ++  A+ L   + L  L P   TY 
Sbjct: 411 KIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYT 470

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNI 549
            ++ GL   G    AD L   ++E  I
Sbjct: 471 AMMLGLYKKGLRGEADALFRKMKEDGI 497



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 219/423 (51%), Gaps = 2/423 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+   + ++S   K+   +V   L+  M   G+  +  + NIL++  C    +  AL F
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + G EPD +T+  L  GF    +I  A  +  +++  G +P++V Y  +I G C+
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              V+  L L   M   G + + + Y+ L+S +C SGR D+A  ++  M    + PD+ T
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ LI    K+ ++ +A +LY EM  + + P+   +  ++ GLC    + EA   F  ++
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C  DVV Y+I+I+GY K   +   ++L+ ++ ++ +  + VT+  LI G+C+ GK+ 
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN 378

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  +   +   G+ P+ +TY   ++  C+ G I++ L +L +M+   +    VTY ++I
Sbjct: 379 VAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIII 438

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR-KAFQLLNQMWLHNL 514
           +G+CK  ++ +A  L   + + G+TPD  TY  ++    K K LR +A  L  +M    +
Sbjct: 439 RGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYK-KGLRGEADALFRKMKEDGI 497

Query: 515 EPT 517
            P 
Sbjct: 498 LPN 500



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 200/396 (50%), Gaps = 3/396 (0%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W+ +Q L   G   ++ T  +L+  +C+   +   L     M+  G + +++ +  LL+ 
Sbjct: 104 WEQMQML---GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNG 160

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            C+  RI +AL +   M  +G +P++V Y+ +I GLCK  +V  A+ L N M    I P+
Sbjct: 161 FCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPD 220

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           +  + +++ GLC      +A      +       DV  +N +ID  VK G I EA +LY 
Sbjct: 221 AVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYE 280

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++I + + P IVT++ LIYG C   ++ +A ++   +   G  P  VTY+  +N YC+  
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSK 340

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            ++  + L  EM  + +    VTYTV+I+G C+  KL  A ++ + M   GV P+ ITYN
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYN 400

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++   C    + KA  +L  M    ++    TYNI+I G+C  G++ +A  L  SL   
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLK 460

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            ++     YT ++     +G   +A   F +M E G
Sbjct: 461 GLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDG 496



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 209/443 (47%), Gaps = 20/443 (4%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P I  ++ L+    ++   +  + L E M   G   N+   ++LL+  C+  ++  AL  
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L +M  +G +PD+VT+  L+ G C+ D+++ A+ +++ M      PN   +  I+ GLC+
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
            + +  A    + + +     D V YN +I G    G   +A ++   + ++ I P + T
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           FN+LI    K G++++A  L + +    L+P  VTY+  +   C    +     +   M 
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
           +K   P  VTY+++I G CK  K++  ++L  +M   GV  + +TY  +I+ +C+   L 
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN 378

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
            A ++   M    + P   TYN+L+ GLC NG ++ A  +L  +Q+  +    V Y  II
Sbjct: 379 VAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIII 438

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQ 620
           +  C  G+V  A   +C +  KG    I  YT                     M++  ++
Sbjct: 439 RGMCKAGEVADAWDLYCSLNLKGLTPDIWTYT--------------------AMMLGLYK 478

Query: 621 GGDLGSVFELAAVMIKSGLLPDK 643
            G  G    L   M + G+LP++
Sbjct: 479 KGLRGEADALFRKMKEDGILPNE 501



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 200/404 (49%), Gaps = 1/404 (0%)

Query: 81  DAILFLQETAGKEFGP-SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
           D +++L E       P ++ + N +++ +C+     +A      M+K G  PD  ++  L
Sbjct: 98  DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSL 157

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           ++G C    + +AL   + M   G EP+ + Y+ +  G     Q+  A  ++ ++ + G 
Sbjct: 158 LNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGI 217

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            PD VTY  LI G C  G  ++  ++   M  +    +V  ++ L+ +  K GRI EA  
Sbjct: 218 RPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEE 277

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           L  EM    L PD+VTYS+LI GLC   ++ +A Q++  M SK   P+   +  ++ G C
Sbjct: 278 LYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYC 337

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           + + +      F  +     +++ V Y ++I GY + G +  A ++++ ++   + P+I+
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNII 397

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T+N L++G C NGK+  A  +L  ++  G++   VTY   +   C+ G +     L   +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSL 457

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
             K + P   TYT ++ GL K+    EA  L   M   G+ P++
Sbjct: 458 NLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNE 501



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 190/359 (52%), Gaps = 1/359 (0%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K+   P ++ T   +++G C+  R+ DA+          + P+VV  N I+   CK   
Sbjct: 143 MKLGHEP-DIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQ 201

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            + A  L   M   G+ PDA +YN LI GLC +G  ++A    + M +  + PD  T++ 
Sbjct: 202 VDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNA 261

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L        +IS A ++ ++++ +  DPDIVTY++LI G C    ++E  ++   M+S+G
Sbjct: 262 LIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKG 321

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              +V+ YS+L++  CKS +++  + L  EM   G+  + VTY++LI+G C+  K++ A 
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAE 381

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           +++  M    + PN   +  +L GLC+   I +A +    +  S    D+V YNI+I G 
Sbjct: 382 EIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGM 441

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
            K G + +A  LY  L  K ++P I T+ +++ G  K G   +A  L   +K  G+ P+
Sbjct: 442 CKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 184/332 (55%), Gaps = 3/332 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + R   ++DA+++  +M E+  + ++  YN+++  L   +  D   DL + ++V     +
Sbjct: 161 FCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPD 220

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T + +I GLC   R  DA   +     +E  P V + NA++    K G    A+ L+ 
Sbjct: 221 AVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYE 280

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M++  L PD  +Y++LI+GLC+   ++EA +    M   G  PD +TYSIL  G+    
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSK 340

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++    K+  ++  +G   + VTYTVLI GYC+ G +    ++ + M+  G   N+I Y+
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYN 400

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           VLL  +C +G+I++AL +L +M+  G+  D+VTY+I+IRG+CK  +V  A  LY  +  K
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLK 460

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
            ++P+ + + A++LGL +K +  EA   F  +
Sbjct: 461 GLTPDIWTYTAMMLGLYKKGLRGEADALFRKM 492



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/451 (23%), Positives = 195/451 (43%), Gaps = 35/451 (7%)

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           + LL KG+     + +  ICG C       G      ML  G +                
Sbjct: 15  RNLLEKGNSGTSPSSSFSICGLCFSRRAYSGGSDYREMLRNGIRYM-------------- 60

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            ++D++L L + M      P +  +S L+  + K  K    I L+ +M    I  N    
Sbjct: 61  -KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             +L   C    ++ A  +   ++      D+V +  +++G+ +   I +A+ ++ +++E
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVE 179

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
               P++V +N++I G CK+ +V +A  LL+ +++ G+ P AVTY + ++  C  G    
Sbjct: 180 MGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDD 239

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              ++  M  + I P   T+  +I    K+ ++ EA +L E+M    + PD +TY+ +I 
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIY 299

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
             C    L +A Q+   M      P   TY+ILI+G C +  +++   L   + +  +  
Sbjct: 300 GLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEIC 611
             V YT +I+ +C  G ++ A   F  MV               FC     G PP+    
Sbjct: 360 NTVTYTVLIQGYCRAGKLNVAEEIFKWMV---------------FC-----GVPPNIITY 399

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            V+L      G +     + A M KSG+  D
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKSGMDAD 430


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 211/421 (50%)

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G+E D IT +I+      L  ++  + V+  +   G +P ++T T LI G C  GNV + 
Sbjct: 107 GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQA 166

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           + L + M    + L+V  Y VL++ +CK+G    A+G L +ME    KP++V YS ++ G
Sbjct: 167 VGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDG 226

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           LCK   V +A+ L +EM  K + PN   +  ++ GLC      EA    D ++      D
Sbjct: 227 LCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPD 286

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           + + NI++D + K G + +A  +   +I     P + T+NSLI+ +C   K+ +A R+  
Sbjct: 287 LQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFH 346

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G  P  V +T+ ++ +C++ NI + + LL+EM      P   T+T +I G C+  
Sbjct: 347 LMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAG 406

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           +   A +L  +M+  G  P+  T   I+   CK   L +A  L   M   NL+     Y+
Sbjct: 407 RPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYS 466

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           IL+DG+C  G L  A  L  SL    + +    YT +IK  C +G + KA      M E 
Sbjct: 467 ILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEEN 526

Query: 583 G 583
           G
Sbjct: 527 G 527



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 244/523 (46%), Gaps = 4/523 (0%)

Query: 68  IVIDGLCQQSRLQ---DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           I +  LC   +L+   +A+   Q  A  +  PSV     ++    +L     A  L   M
Sbjct: 43  ISMRNLCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHM 102

Query: 125 LK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
               G+  D  + NI+I+ LC    +         M + G+EP  +T + L  G  +   
Sbjct: 103 FSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGN 162

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           ++ A  +   +       D+ TY VLI G C+ G+    +     M  + +K NV+ YS 
Sbjct: 163 VAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYST 222

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++  +CK G + EAL L  EM   G++P+LVTY+ LI+GLC   +  +A  L +EM    
Sbjct: 223 IMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMG 282

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P+      ++   C++  + +A+     +I++    DV  YN +I  Y     + EA+
Sbjct: 283 MRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAM 342

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +++  ++ +   P IV F SLI+G+CK+  +  A  LL+ +   G  P   T+TT +  +
Sbjct: 343 RVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGF 402

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ G       L   M      P   T  V++ GLCK+  L EAV L + M    +  + 
Sbjct: 403 CQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNI 462

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           + Y+ ++   C    L  A++L + +    L+     Y I+I GLC  G L  A+ LL++
Sbjct: 463 VIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLIN 522

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           ++E+        Y   ++    + ++ +++ +   M +KGF +
Sbjct: 523 MEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSV 565



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 226/473 (47%), Gaps = 1/473 (0%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
            ++LN +++  C+L        +   M K GL P   +   LI+GLC+ G++ +A+   +
Sbjct: 112 TITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLAD 171

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            M +     D  TY +L  G         A   ++K+  +   P++V Y+ ++ G C+ G
Sbjct: 172 HMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDG 231

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            V E L L   M  +G + N++ Y+ L+  +C  GR  EA  LL EM  +G++PDL   +
Sbjct: 232 LVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLN 291

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           IL+   CK+ KV +A  +   M      P+ F + +++   C +  + EA   F  ++  
Sbjct: 292 ILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSR 351

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
             + D+V++  +I G+ K  NI +A+ L  ++ +    P + T+ +LI GFC+ G+   A
Sbjct: 352 GRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAA 411

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
           + L   +  +G  P+  T    ++  C+E  +   ++L + ME   +    V Y++++ G
Sbjct: 412 KELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDG 471

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           +C   KL  A +L   +   G+  +   Y  +I+  CK   L KA  LL  M  +   P 
Sbjct: 472 MCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPN 531

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK-AHCAEGDV 569
           + TYN+ + GL    ++  +   L  +++   S+       II      EGD 
Sbjct: 532 NCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLSTNEGDT 584



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 220/451 (48%), Gaps = 3/451 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R  +V     V+  M +L L+ ++ T  +L+  L    +      L D ++    P +VY
Sbjct: 124 RLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVY 183

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T  ++I+GLC+      A+ +L++   + + P+VV  + IM   CK G    A  L   M
Sbjct: 184 TYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEM 243

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G+ P+  +Y  LI GLC  G  +EA    ++M + G+ PD    +IL   F    ++
Sbjct: 244 NGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKV 303

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  VI  +++ G  PD+ TY  LI  YC    + E +++  +M+S+G   +++ ++ L
Sbjct: 304 MQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSL 363

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   CK   I++A+ LL EM  +G  PD+ T++ LI G C+  +   A +L+  M     
Sbjct: 364 IHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQ 423

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN      IL GLC++ +++EA     ++  SN   ++V+Y+I++DG    G +  A +
Sbjct: 424 VPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWE 483

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+  L  K +  ++  +  +I G CK G +  A  LL  ++ +G  P+  TY  F+    
Sbjct: 484 LFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLL 543

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            +  I R +  L  M  K       T   +I
Sbjct: 544 TKKEIARSIKYLTIMRDKGFSVDAATTEFII 574



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 166/400 (41%), Gaps = 79/400 (19%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVY 64
           +TG    AV  + KM+E + K ++  Y++++  L    ++    +L  ++       N+ 
Sbjct: 194 KTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLV 253

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I GLC   R ++A   L E       P +  LN ++  +CK G    AK +   M
Sbjct: 254 TYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFM 313

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALE----------------FTN----------- 157
           +  G  PD F+YN LIH  C+   M EA+                 FT+           
Sbjct: 314 ILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNI 373

Query: 158 --------DMGRHGVEPDAITYSILAKGF------------------------------- 178
                   +M + G  PD  T++ L  GF                               
Sbjct: 374 NKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVI 433

Query: 179 -------HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
                  +LLS+     K ++K      D +IV Y++L+ G C  G +    +L   +  
Sbjct: 434 LDGLCKENLLSEAVSLAKAMEK---SNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPG 490

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +G ++NV  Y++++  +CK G +D+A  LL  ME  G  P+  TY++ ++GL  + ++ +
Sbjct: 491 KGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIAR 550

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           +I+    M  K  S ++     I+  L   E  T+ R + 
Sbjct: 551 SIKYLTIMRDKGFSVDAATTEFIINYLSTNEGDTKIREFL 590


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 250/536 (46%), Gaps = 16/536 (2%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S +I  LC   R  DA   L +TAG   G  VV+ NA+++ YC+ G    A+ L      
Sbjct: 48  SALIRSLCAAGRTADAARAL-DTAGDAAG--VVAYNAMIAGYCRAGQVAAARRL---AAA 101

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + P+A++Y  ++  LC  G + +AL   ++M   G         ++ +          
Sbjct: 102 VPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A + +Q L  KG   D     +++   C+ G V+EG++L   + S G + ++++Y+ +L 
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 247 SMCKSGRIDEALGLLYEMEAV----------GLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            +C + R D+   L+ EM  V          G  PDL  Y+ +I G+CK      A  + 
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           + M S  + PN   +  +L GLC  E   EA      +   +C  D V +NI++D + + 
Sbjct: 282 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 341

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G +   ++L  Q++E    P ++T+ ++I GFCK G V +A  LL  +   G +P+ ++Y
Sbjct: 342 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISY 401

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           T  +   C          L+  M  +   P  VT+  +I  +CK+   ++A++LL+ M V
Sbjct: 402 TIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLV 461

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G +PD I+Y+T+I    K     +A +LLN M    + P +  Y+ +   L   G    
Sbjct: 462 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDK 521

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
              +  S+Q+  +      Y  +I + C   +  +A+ FF  MV  G   +   YT
Sbjct: 522 IIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 577



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 233/500 (46%), Gaps = 20/500 (4%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEVAK 118
           P N YT   ++  LC +  + DA+  L E   +    +    + I+   C+ G F    +
Sbjct: 105 PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVR 164

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L  L  K G   D+ + N+++  +C  G ++E +E    +   G EPD ++Y+ + KG 
Sbjct: 165 ALQVLHAK-GCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 179 HLLSQISGAWKVIQKLLIK--------------GSDPDIVTYTVLICGYCQIGNVEEGLK 224
            +  +    W  +++L+++              G  PD+  Y  +I G C+ G+ E    
Sbjct: 224 CMAKR----WDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAND 279

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           +   M S G K NV+ Y+ +L  +C + R +EA  LL EM       D VT++IL+   C
Sbjct: 280 ILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFC 339

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           +   V + I+L  +M      P+   +  ++ G C++ ++ EA M   ++    C  + +
Sbjct: 340 QNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTI 399

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            Y I++ G  +     +A +L   +I++   P+ VTFN+LI   CK G    A  LL  +
Sbjct: 400 SYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQM 459

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
            ++G  P  ++Y+T ++   + G  +  L LL  M  K I P  + Y+ +   L ++ + 
Sbjct: 460 LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRT 519

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            + +Q+ + +    V  D   YN +I S CK  +  +A      M  +   P  +TY IL
Sbjct: 520 DKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTIL 579

Query: 525 IDGLCVNGDLKNADCLLVSL 544
           I GL   G ++ A  LL  L
Sbjct: 580 IRGLASEGLVREAQDLLSEL 599



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 184/365 (50%), Gaps = 6/365 (1%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSI 68
           VH+A   +++M E      ++ Y +++  +    H ++  D+   +       NV   + 
Sbjct: 242 VHEA---LSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNT 298

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           V+ GLC   R ++A   L E   ++     V+ N ++  +C+ G  +    L   ML++G
Sbjct: 299 VLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 358

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  +Y  +I+G C  G ++EA+    +M   G +P+ I+Y+I+ KG     +   A 
Sbjct: 359 CIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQ 418

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++I  ++ +G  P+ VT+  LI   C+ G  E+ ++L + ML  G   ++I+YS ++  +
Sbjct: 419 ELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGL 478

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
            K+G+ +EAL LL  M   G+ P+ + YS +   L ++ +  K IQ+++ +    +  ++
Sbjct: 479 GKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDA 538

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             + A++  LC++     A  +F  ++ + C+ +   Y I+I G    G + EA  L  +
Sbjct: 539 ALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSE 598

Query: 369 LIEKR 373
           L  +R
Sbjct: 599 LCSRR 603



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 192/464 (41%), Gaps = 31/464 (6%)

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           + LI   C  G   +  +    + + G    V+AY+ +++  C++G++  A        A
Sbjct: 48  SALIRSLCAAGRTADAAR---ALDTAGDAAGVVAYNAMIAGYCRAGQVAAAR---RLAAA 101

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           V + P+  TY  ++R LC +  +  A+ + +EM  +  +        IL   C       
Sbjct: 102 VPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A      L    C  D    N+++    + G + E V+L R+L      P IV++N+++ 
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 387 GFCKNGKVADARRL----------LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           G C   +  D   L          L  +  HG  P    Y T ++  C++G+ +    +L
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
             M +  + P  V Y  V+KGLC   + +EA  LL +M+      D +T+N ++  FC+ 
Sbjct: 282 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 341

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
             + +  +LL QM  H   P   TY  +I+G C  G +  A  LL ++         ++Y
Sbjct: 342 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISY 401

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MMLS 601
           T ++K  C       A      M+++G   +   +    +F C              ML 
Sbjct: 402 TIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLV 461

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           NG  PD      ++    + G      EL  VMI  G+ P+  +
Sbjct: 462 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTII 505


>gi|293332227|ref|NP_001169164.1| uncharacterized protein LOC100383014 [Zea mays]
 gi|223975267|gb|ACN31821.1| unknown [Zea mays]
          Length = 469

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 224/456 (49%), Gaps = 1/456 (0%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G  PD F+YN L+HG+C  G ++EAL     M R G+ P+ +TY++L  GF   S++  A
Sbjct: 5   GCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEA 64

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             V++++  KG      TY  L+ G  +    E   ++    +     L+ IAY  LL  
Sbjct: 65  VCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYC 124

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           + K+    EA+ L  +M   G      T+SI+I    K  +     +L ++   K  +  
Sbjct: 125 LSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLG 184

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  I+      + I++A  YF  ++    +  V  YNI+ID + K G +  A++  +
Sbjct: 185 FDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIK 244

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            + E   SP++VTFN+LI G+ K G V DA+  L  +  HGL P  +T+T+ ++  C   
Sbjct: 245 VMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTH 304

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            +        EM    + P   TY V+I GLC    + +A++LL  M + G+TPD  ++N
Sbjct: 305 QLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFN 364

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
             I SFC+ + + KA +L N M  + + P S TYN LI  LC    +  A  ++++++  
Sbjct: 365 APILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESI 424

Query: 548 N-ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           + I   +  Y  ++ A    G   +A  F  ++  K
Sbjct: 425 SCIGTKQHTYWPVVGALTKMGRFSEAGMFMNKLHRK 460



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 180/395 (45%), Gaps = 2/395 (0%)

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  PD  TY  L+ G C+ G V+E L+L + M   G + NV+ Y++L+   C + R++EA
Sbjct: 5   GCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEA 64

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           + +L  M+  G+     TY  L+ G  +  +  +A ++ +E      + +S A+  +L  
Sbjct: 65  VCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYC 124

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           L + +M  EA      +     +     ++I+I   VK+    +  +L    I+K  +  
Sbjct: 125 LSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLG 184

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
              +  +I  F +   ++ A +    +   GL  S  +Y   ++ + + G ++R L  ++
Sbjct: 185 FDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIK 244

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            M+     P  VT+  +I G  K   + +A   L+ +   G+ PD IT+ ++I   C   
Sbjct: 245 VMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTH 304

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            L  AF   ++M    + P   TYN+LI GLC  G +  A  LL  ++   I+    ++ 
Sbjct: 305 QLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFN 364

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             I + C    + KA   F  M   G  +S   YT
Sbjct: 365 APILSFCRMRKIEKAQKLFNDMSRYG--VSPDSYT 397



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 179/414 (43%), Gaps = 70/414 (16%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M + G + +   Y+ L+  +C+ G +DEAL L+ +ME  G++P++VTY++L+ G C   +
Sbjct: 1   MPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASR 60

Query: 289 VHKAIQLYNEMCSKRISP-----NSFAHGA------------------------------ 313
           V +A+ +   M  K +S       S  HGA                              
Sbjct: 61  VEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHT 120

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL----------------- 356
           +L  L + +M  EA      +     +     ++I+I   VK+                 
Sbjct: 121 LLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKG 180

Query: 357 GNIG------------------EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           GN+G                  +A + + Q++   +  S+ ++N +I  F K G+V  A 
Sbjct: 181 GNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERAL 240

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
             +  ++  G  P+ VT+ T +N Y + GN+    A L+ +    + P  +T+T +I GL
Sbjct: 241 ETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGL 300

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           C   +L +A     +M   GV P+  TYN +I   C    + KA +LLN+M +  + P +
Sbjct: 301 CHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDA 360

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            ++N  I   C    ++ A  L   +  + +S     Y  +IKA C E  V +A
Sbjct: 361 YSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEA 414



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/469 (20%), Positives = 209/469 (44%), Gaps = 33/469 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           R G+V +A+ ++ +M+   ++ ++ TY                                +
Sbjct: 22  RRGIVDEALRLVKQMERAGIRPNVVTY--------------------------------T 49

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           +++DG C  SR+++A+  L+    K    +  +  +++    +    E A  +    ++ 
Sbjct: 50  MLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIES 109

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
                + +Y+ L++ L      +EA+E    M + G    + T+SI+      + + S  
Sbjct: 110 DPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDL 169

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            +++   + KG +     Y ++I  + +  ++ +  K    M+S G   +V +Y++++  
Sbjct: 170 CELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDC 229

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
             K+G ++ AL  +  M+  G  P+LVT++ LI G  K   VH A      +    + P+
Sbjct: 230 FAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPD 289

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
                +++ GLC    + +A   F  +       +V  YN++I G    G++ +A++L  
Sbjct: 290 VITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLN 349

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++    I+P   +FN+ I  FC+  K+  A++L + +  +G+ P + TY   + A C+E 
Sbjct: 350 KMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDER 409

Query: 428 NIQRLLALLQEMET-KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
            +     ++  ME+   IG    TY  V+  L K  +  EA   +  ++
Sbjct: 410 RVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGRFSEAGMFMNKLH 458



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 129/257 (50%), Gaps = 1/257 (0%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A   F  M+  GL     SYNI+I     AG +E ALE    M   G  P+ +T++ L  
Sbjct: 204 ANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLIN 263

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+  L  +  A   ++ ++  G  PD++T+T LI G C    +++       M   G + 
Sbjct: 264 GYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRP 323

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NV  Y+VL+  +C +G + +A+ LL +M+  G+ PD  +++  I   C+  K+ KA +L+
Sbjct: 324 NVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLF 383

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-QDVVLYNIMIDGYVK 355
           N+M    +SP+S+ + A++  LC++  + EA+    ++   +CI      Y  ++    K
Sbjct: 384 NDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGALTK 443

Query: 356 LGNIGEAVQLYRQLIEK 372
           +G   EA     +L  K
Sbjct: 444 MGRFSEAGMFMNKLHRK 460



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 123/242 (50%), Gaps = 1/242 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V + +IVID   +   ++ A+  ++      F P++V+ N +++ Y KLG    AK   
Sbjct: 219 SVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFL 278

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +++++GL PD  ++  LI GLC    +++A    ++M   GV P+  TY++L  G    
Sbjct: 279 KMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSA 338

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +S A +++ K+ + G  PD  ++   I  +C++  +E+  KL   M   G   +   Y
Sbjct: 339 GHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTY 398

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVG-LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           + L+ ++C   R+DEA  ++  ME++  +     TY  ++  L K  +  +A    N++ 
Sbjct: 399 NALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGRFSEAGMFMNKLH 458

Query: 301 SK 302
            K
Sbjct: 459 RK 460



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 43/258 (16%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           +++ G V  A+  I  M+E     ++ T+N+L                            
Sbjct: 230 FAKAGEVERALETIKVMQESGFSPNLVTFNTL---------------------------- 261

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
               I+G  +   + DA  FL+        P V++  +++   C     + A   F  M 
Sbjct: 262 ----INGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMS 317

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           ++G+ P+  +YN+LIHGLC AG + +A+E  N M   G+ PDA +++     F  + +I 
Sbjct: 318 EWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIE 377

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ------GFKLNVI 239
            A K+   +   G  PD  TY  LI   C    V+E    +E++L+       G K +  
Sbjct: 378 KAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEA---KEIILAMESISCIGTKQHT- 433

Query: 240 AYSVLLSSMCKSGRIDEA 257
            Y  ++ ++ K GR  EA
Sbjct: 434 -YWPVVGALTKMGRFSEA 450


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 229/478 (47%), Gaps = 35/478 (7%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LFC ML+    P    +  ++  +      +  +   + M   G+  D  +++IL  
Sbjct: 63  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F   S++S A  ++ K++  G  P IVT   L+ G+CQ    +E + L + M   GF  
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NV+ Y+ +++ +CK+  ++ AL + Y ME  G++ D VTY+ LI GL    +   A +L 
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M  ++I PN                                   V+ +  +ID +VK 
Sbjct: 243 RDMVKRKIDPN-----------------------------------VIFFTALIDTFVKE 267

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           GN+ EA  LY+++I + + P++ T+NSLI GFC +G + DA+ + D +   G  P  VTY
Sbjct: 268 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T +  +C+   ++  + L  EM  + +     TY  +I G C+  KL  A ++   M  
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            GV+PD +TYN ++   C    + KA  ++  +    ++    TYNI+I GLC    LK 
Sbjct: 388 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
           A CL  SL    +    +AY T+I   C +G   +A     +M E GF  S R Y ++
Sbjct: 448 AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDET 505



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 223/445 (50%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +  DA     E       PS+V    +++   K+   ++   L+  M   G+  D +S+ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           ILIH  C    +  AL     M + G  P  +T   L  GF   ++   A  ++  +   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  P++V Y  +I G C+  ++   L++   M  +G + + + Y+ L+S +  SGR  +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             LL +M    + P+++ ++ LI    K+  + +A  LY EM  + + PN F + +++ G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
            C    + +A+  FD ++   C  DVV YN +I G+ K   + + ++L+ ++  + +   
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
             T+N+LI+G+C+ GK+  A+++ + +   G+ P  VTY   ++  C  G I++ L +++
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           +++   +    +TY ++I+GLC+  KL+EA  L   +   GV PD I Y T+I   C+  
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYN 522
             R+A +L  +M      P+   Y+
Sbjct: 479 LQREADKLCRRMKEDGFMPSERIYD 503



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 212/412 (51%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           DI+  LY  ++      ++Y+ +I+I   C+ SRL  A+  L +     F PS+V+L ++
Sbjct: 96  DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 155

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           ++ +C+    + A  L   M  +G  P+   YN +I+GLC    +  ALE    M + G+
Sbjct: 156 LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI 215

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
             DA+TY+ L  G     + + A ++++ ++ +  DP+++ +T LI  + + GN+ E   
Sbjct: 216 RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN 275

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L + M+ +    NV  Y+ L++  C  G + +A  +   M + G  PD+VTY+ LI G C
Sbjct: 276 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFC 335

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K  +V   ++L+ EM  + +  ++F +  ++ G C+   +  A+  F+ ++      D+V
Sbjct: 336 KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV 395

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            YNI++D     G I +A+ +   L +  +   I+T+N +I G C+  K+ +A  L  ++
Sbjct: 396 TYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 455

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
              G++P A+ Y T ++  C +G  +    L + M+     P+   Y   ++
Sbjct: 456 TRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 199/422 (47%), Gaps = 15/422 (3%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +++ ++ +L+ + K  + D  + L ++ME +G+  DL +++ILI   C+  ++  A+ L 
Sbjct: 78  SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M      P+    G++L G C+     EA    DS+     + +VV+YN +I+G  K 
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
            ++  A++++  + +K I    VT+N+LI G   +G+  DA RLL  +    ++P+ + +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           T  ++ + +EGN+     L +EM  +++ P   TY  +I G C    L +A  + + M  
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G  PD +TYNT+I  FCK K +    +L  +M    L   + TYN LI G C  G L  
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---- 592
           A  +   + +  +S   V Y  ++   C  G + KA+     + +   ++ I  Y     
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 437

Query: 593 --------KSFFCMMLS---NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                   K  +C+  S    G  PD      M+    + G      +L   M + G +P
Sbjct: 438 GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497

Query: 642 DK 643
            +
Sbjct: 498 SE 499



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 133/302 (44%), Gaps = 15/302 (4%)

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  L+ ++++ R  PSIV F  ++    K  K      L   ++  G+     ++T  +
Sbjct: 62  DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + +C    +   LALL +M      P+ VT   ++ G C+  + QEAV L++ M   G  
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ + YNT+I   CK +DL  A ++   M    +   + TYN LI GL  +G   +A  L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
           L  + +  I    + +T +I     EG++ +A   + +M+ +    ++  Y         
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                  K  F +M+S G  PD      ++  F +   +    +L   M   GL+ D F 
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361

Query: 646 IN 647
            N
Sbjct: 362 YN 363


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 159/651 (24%), Positives = 296/651 (45%), Gaps = 41/651 (6%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLY----NLRHTDIMWDLYDDIKVSETPRNVY 64
            G    A  ++ KMK   L  S  TYN++L+      R    +  L +D++      ++Y
Sbjct: 168 NGEFRKAEDMLQKMKSCCLSNS-ATYNTILHWYVKKGRFKAALCVL-EDMERDSIQADIY 225

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I+ID LC+  R   A L L+     +  P   + N +++ +   G    A+ +F  M
Sbjct: 226 TYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHM 285

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L+  L P   +Y  +I G C    +++AL   ++M   GV P  +TYS L  G+  +S +
Sbjct: 286 LRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSML 345

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  ++  L  +G   +    T+LI G+CQ+G + +  ++ + ML  G   +V+ YS L
Sbjct: 346 GPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSAL 405

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++ MC+  ++ E   +L  M+  G+ P+ V Y+ LI   CK   V  A++ + ++  + +
Sbjct: 406 INGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGL 465

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             N   H A+L     + MITEA  +   +   N   + V +N +ID Y   G I EA  
Sbjct: 466 VANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFS 525

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR----LLDTIKLHGLEPSAV---TYT 417
           +Y  ++    SP++ T+ +L+ G C+ G +  A++    LLD        PSAV   T+ 
Sbjct: 526 VYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDI-------PSAVDEKTFN 578

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +   C+ G +   L + ++M      P   TYT+++ G C++ K+  A+ +L+ M   
Sbjct: 579 ALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEK 638

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL-HNLEPTSATYNILIDGLCVNGDLKN 536
           GV PD + Y  ++        ++ A  +  ++     L      YN L++G    G++  
Sbjct: 639 GVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNT 698

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFF 596
              ++  + ++ +     +Y  ++  +   G   K++  +  MV KG             
Sbjct: 699 IKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIR----------- 747

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                    PD     ++++   + G +    +    M+  G+ PDK + +
Sbjct: 748 ---------PDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFD 789



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 257/528 (48%), Gaps = 5/528 (0%)

Query: 62   NVYTNSI----VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            N+  NS+    +ID  C + ++ +A     +       P+V +   ++   C+ G    A
Sbjct: 499  NISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQA 558

Query: 118  KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
            K     +L      D  ++N L+ G+C  G+++EAL+    M ++   PD  TY+IL  G
Sbjct: 559  KQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSG 618

Query: 178  FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG-LKLREVMLSQGFKL 236
            F    +I  A  ++Q +L KG  PD V YT L+ G    G V+      +E++  +G   
Sbjct: 619  FCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYA 678

Query: 237  NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            + IAY+ L++   K G ++    ++ +M    + P+  +Y+IL+ G  K+ +  K++ LY
Sbjct: 679  DCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLY 738

Query: 297  NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
              M  K I P++  +  ++LGL E  +I  A  + + +++     D ++++I+I  + + 
Sbjct: 739  KYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEK 798

Query: 357  GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
              +  A++L+  +    +SPS  TF+++I G  +   +  +  +L  +   GL+P+   Y
Sbjct: 799  SKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHY 858

Query: 417  TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
               +NA C  G I R   L +EM+   I P  V  + +I+GLC+  KL+EAV +  +M  
Sbjct: 859  IALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMR 918

Query: 477  IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             G+ P   T+ T++ S CK   +  A  L   M L  L+    +YN+LI GLC +  + +
Sbjct: 919  SGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISD 978

Query: 537  ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            A  L   ++   +      Y T+  A  + G +         + E+G 
Sbjct: 979  ALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGL 1026



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/601 (23%), Positives = 266/601 (44%), Gaps = 71/601 (11%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T S +I+G+C+ +++ +    L         P+ V    ++  YCK G+ +VA   F
Sbjct: 398 DVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHF 457

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             + + GL  +   +N L+      G + EA  F   M R  +  ++++++ +   +   
Sbjct: 458 VDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHR 517

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A+ V   ++  G  P++ TY  L+ G CQ G++ +  +    +L     ++   +
Sbjct: 518 GKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTF 577

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL  +CK G +DEAL +  +M      PD+ TY+IL+ G C++ K+  A+ +   M  
Sbjct: 578 NALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLE 637

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLI-------------------------- 335
           K + P++ A+  +L GL  +  +  A   F  +I                          
Sbjct: 638 KGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVN 697

Query: 336 -----MSNCIQDVVL-----YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
                MS+  Q+ V      YNI++ GYVK G   +++ LY+ ++ K I P  VT+  LI
Sbjct: 698 TIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLI 757

Query: 386 YG-----------------------------------FCKNGKVADARRLLDTIKLHGLE 410
            G                                   F +  K+ +A RL + +K   L 
Sbjct: 758 LGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLS 817

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           PS+ T++  +N    +  + +   +L EM    + P H  Y  ++   C+  ++  A +L
Sbjct: 818 PSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRL 877

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
            E+M  IG+ P ++  ++IIR  C+C  L +A  + + M    + PT AT+  L+  LC 
Sbjct: 878 KEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCK 937

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
              + +A  L   ++   + +  V+Y  +I   C +  +  A+  + +M  KG   ++  
Sbjct: 938 ESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTT 997

Query: 591 Y 591
           Y
Sbjct: 998 Y 998



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 158/661 (23%), Positives = 285/661 (43%), Gaps = 20/661 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           +L   Y +   V DA   +  M +   K S    NS+L  L     +  +W    +    
Sbjct: 90  LLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFLRESLAR 149

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           + P +V T +I+++ LC     + A   LQ+        S  + N I+  Y K G  + A
Sbjct: 150 KFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLSNSA-TYNTILHWYVKKGRFKAA 208

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             +   M +  +  D ++YNI+I  LC       A      M +  + PD  TY+ L  G
Sbjct: 209 LCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLING 268

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F    +I+ A  V   +L +   P + TYT +I GYC+   +++ L +   M   G   +
Sbjct: 269 FFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPS 328

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + YS LL+  CK   +  AL L+ ++++ G+  +    +ILI G C+  ++ KA Q+  
Sbjct: 329 ELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILK 388

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            M    I P+   + A++ G+C    + E +     +  S  + + VLY  +I  Y K G
Sbjct: 389 SMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAG 448

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            +  A++ +  +  + +  + V  N+L+  F + G + +A      +    +  ++V++ 
Sbjct: 449 YVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFN 508

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +++YC  G I    ++  +M      P   TY  +++GLC+   L +A Q +  +  I
Sbjct: 509 CIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDI 568

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
               D+ T+N ++   CK   L +A  +  +M  +N  P   TY IL+ G C  G +  A
Sbjct: 569 PSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPA 628

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV-EKGFEISIRDYT---- 592
             +L  + E  +    VAYT ++     EG V  A   F +++ ++G       Y     
Sbjct: 629 LVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMN 688

Query: 593 -----------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                      K     M  N   P+     +++  + + G       L   M++ G+ P
Sbjct: 689 GYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRP 748

Query: 642 D 642
           D
Sbjct: 749 D 749



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/552 (25%), Positives = 251/552 (45%), Gaps = 41/552 (7%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDD-IKVSETPR 61
            + R GM+ +A      M  +++  +  ++N ++ +  H   +   + +YDD ++   +P 
Sbjct: 479  FYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSP- 537

Query: 62   NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            NV T   ++ GLCQ   L  A  F+             + NA++   CK G  + A  + 
Sbjct: 538  NVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDIC 597

Query: 122  CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
              M+K    PD  +Y IL+ G C  G +  AL     M   GV PD + Y+ L  G    
Sbjct: 598  EKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINE 657

Query: 182  SQISGAWKVIQKLL-------------------IKGSD-----------------PDIVT 205
             Q+  A  V Q+++                   +KG +                 P+  +
Sbjct: 658  GQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSAS 717

Query: 206  YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
            Y +L+ GY + G   + L L + M+ +G + + + Y +L+  + + G ID A+  L +M 
Sbjct: 718  YNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMV 777

Query: 266  AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
              G+ PD + + ILI    ++ K+H A++L+N M    +SP+S    A++ GL  K  + 
Sbjct: 778  LEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLD 837

Query: 326  EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
            ++      ++      +   Y  +++   ++G I  A +L  ++    I P+ V  +S+I
Sbjct: 838  QSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSII 897

Query: 386  YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
             G C+ GK+ +A  +   +   G+ P+  T+TT M++ C+E  I   L L + ME   + 
Sbjct: 898  RGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLK 957

Query: 446  PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
               V+Y V+I GLCK   + +A+ L  +M   G+ P+  TY T+  +      ++   +L
Sbjct: 958  VDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEEL 1017

Query: 506  LNQMWLHNLEPT 517
            L  +    L P 
Sbjct: 1018 LEDIEERGLIPA 1029



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/210 (19%), Positives = 83/210 (39%), Gaps = 16/210 (7%)

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
            HV + ++IK   K+ K+ +A   +  M   G     +  N+I+++  +  + +  +  L
Sbjct: 84  NHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFL 143

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +           T NIL++ LC NG+ + A+ +L  ++   +S     Y TI+  +  +
Sbjct: 144 RESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLS-NSATYNTILHWYVKK 202

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDY-------------TKSFFCM--MLSNGFPPDQEIC 611
           G    A+     M     +  I  Y              ++F  +  M  +   PD+   
Sbjct: 203 GRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTY 262

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
             ++  F   G +     +   M++  L+P
Sbjct: 263 NTLINGFFGEGKINHARCVFNHMLRQTLVP 292


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 248/514 (48%), Gaps = 24/514 (4%)

Query: 50  LYDDIKVSETPR-----NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           L+D  +V E  R     NV T + +IDG C+  RL DA+  +   A     P   + N +
Sbjct: 169 LWDAERVLEAARASGAANVVTYTALIDGYCRSGRLTDALRLI---ASMPVAPDTYTYNTV 225

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +   C     E A+ L   M++   HP+  ++   I   C  G ++ A+E    M ++G 
Sbjct: 226 LKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGC 285

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            PD + YS L  GF    ++  A K++  +L +   P+ V Y   + G C  G  +E  +
Sbjct: 286 MPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCR---PNTVCYNAALKGLCIAGRWDEVGE 342

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L   M+ +    N   +S L++S+C++   + A+ +L +M+  G  PD+V+Y+ +I    
Sbjct: 343 LIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFS 402

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           +Q     A++L N M  K   P++ +  A+L  LC  E   +A      ++  +C  + +
Sbjct: 403 EQACADDALKLLNSMLCK---PDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEM 459

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG--KVADARRLLD 402
            +NI+ID   + G + +A++++  + + R +P IVT++SLI GF + G  KVA      D
Sbjct: 460 TFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVA-----FD 514

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
             +         +Y   +   C          L+ +M TK   P  VT+ ++I  LC++ 
Sbjct: 515 LFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKG 574

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            +  A+++ E M   G+TPD  TYN +I  + +   L  A + L+ M     EP + +YN
Sbjct: 575 LVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTM---PCEPDTISYN 631

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
            ++ GLC     K+A+ L+  +   N +  +V +
Sbjct: 632 SILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/530 (26%), Positives = 253/530 (47%), Gaps = 17/530 (3%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K S     V  N++V  G C+   L DA   L E A      +VV+  A++  YC+ G 
Sbjct: 145 LKTSGAADAVSHNTLVA-GYCRDGSLWDAERVL-EAARASGAANVVTYTALIDGYCRSGR 202

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A  L   M    + PD ++YN ++ GLC A   EEA E   +M R+   P+ +T++ 
Sbjct: 203 LTDALRLIASM---PVAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFAT 259

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
             + F     +  A ++++++   G  PD+V Y+ L+ G+ + G V++ LKL   ML + 
Sbjct: 260 QIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCRP 319

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              N + Y+  L  +C +GR DE   L+ EM      P+  T+S LI  LC+      AI
Sbjct: 320 ---NTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAI 376

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           ++  +M      P+  ++  I+    E+    +A    +S++   C  D + +N ++   
Sbjct: 377 EVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCL 433

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            +     +A +L  +++++    + +TFN LI   C+NG+V DA  + + +  +   P  
Sbjct: 434 CRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDI 493

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTY++ +N + E+G  +    L + M  +A      +Y   +KGLC   +  +A +L+ D
Sbjct: 494 VTYSSLINGFSEQGLDKVAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIAD 550

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M      P+++T+N +I S C+   + +A ++  QM  + + P   TYN LI+G    G 
Sbjct: 551 MVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGC 610

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L +A   L  L         ++Y +I+K  C       A     +M+ K 
Sbjct: 611 LDDA---LKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKN 657



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/516 (24%), Positives = 245/516 (47%), Gaps = 13/516 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y R G + DA  V+   +      ++ TY +L+     +  + D    I       + YT
Sbjct: 163 YCRDGSLWDAERVLEAARASG-AANVVTYTALIDGYCRSGRLTDALRLIASMPVAPDTYT 221

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + V+ GLC   + ++A   ++E       P+ V+    +  +C+ G  + A  L   M 
Sbjct: 222 YNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMP 281

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           KYG  PD   Y+ L++G    G +++AL+  + M      P+ + Y+   KG  +  +  
Sbjct: 282 KYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTM---LCRPNTVCYNAALKGLCIAGRWD 338

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
              ++I +++ K   P+  T++ LI   CQ    E  +++ E M   G+  +V++Y+ ++
Sbjct: 339 EVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTII 398

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           S   +    D+AL LL  M     KPD ++++ +++ LC+ ++ + A +L  +M  +   
Sbjct: 399 SCFSEQACADDALKLLNSMLC---KPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCH 455

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
            N      ++  LC+   + +A   F+ +    C  D+V Y+ +I+G+ + G    A  L
Sbjct: 456 TNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDL 515

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           +R +  +     I ++N+ + G C   +  DA  L+  +      P+ VT+   +N+ C+
Sbjct: 516 FRSMPCR---ADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQ 572

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +G + R + + ++M    I P   TY  +I G  +Q  L +A++ L  M      PD I+
Sbjct: 573 KGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTM---PCEPDTIS 629

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
           YN+I++  C+ +  + A +L+ +M   N  P   T+
Sbjct: 630 YNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/500 (23%), Positives = 235/500 (47%), Gaps = 22/500 (4%)

Query: 96  PSVVSLNAIMSRYC-KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
           P+V++ N ++ + C +   A+  + L    LK     DA S+N L+ G C  GS+ +A E
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLE--ALKTSGAADAVSHNTLVAGYCRDGSLWDA-E 173

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
              +  R     + +TY+ L  G+    +++ A ++I  + +    PD  TY  ++ G C
Sbjct: 174 RVLEAARASGAANVVTYTALIDGYCRSGRLTDALRLIASMPVA---PDTYTYNTVLKGLC 230

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
                EE  +L   M+      N + ++  + + C++G +D A+ LL +M   G  PD+V
Sbjct: 231 FAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVV 290

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
            YS L+ G  +  +V  A++L + M  +   PN+  + A L GLC      E       +
Sbjct: 291 IYSTLVNGFSEHGRVDDALKLLSTMLCR---PNTVCYNAALKGLCIAGRWDEVGELIAEM 347

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           +  +C  +   ++ +I+   +      A+++  Q+ +    P +V++N++I  F +    
Sbjct: 348 VRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACA 407

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            DA +LL+++     +P  +++   +   C          L+ +M  +      +T+ ++
Sbjct: 408 DDALKLLNSMLC---KPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNIL 464

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I  LC+  ++++A+++ E M     TPD +TY+++I  F +    + AF L   M     
Sbjct: 465 IDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSM----- 519

Query: 515 EPTSA---TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
            P  A   +YN  + GLC+     +A  L+  +   +    +V +  +I + C +G V++
Sbjct: 520 -PCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNR 578

Query: 572 AMTFFCQMVEKGFEISIRDY 591
           A+  + QM + G    I  Y
Sbjct: 579 AIEVYEQMPKYGITPDIFTY 598



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/384 (22%), Positives = 173/384 (45%), Gaps = 20/384 (5%)

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P ++T +ILI+ LC + ++  A ++  E      + ++ +H  ++ G C    + +A   
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVL-EALKTSGAADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            ++   S    +VV Y  +IDGY + G + +A++L   +    ++P   T+N+++ G C 
Sbjct: 176 LEAARASG-AANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCF 231

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
             +  +A  L+  +  +   P+ VT+ T + A+C+ G + R + LL++M      P  V 
Sbjct: 232 AKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVI 291

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y+ ++ G  +  ++ +A++LL  M      P+ + YN  ++  C      +  +L+ +M 
Sbjct: 292 YSTLVNGFSEHGRVDDALKLLSTMLC---RPNTVCYNAALKGLCIAGRWDEVGELIAEMV 348

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
             +  P  AT++ LI+ LC N   + A  +L  +Q++      V+Y TII     +    
Sbjct: 349 RKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACAD 408

Query: 571 KAMTFFCQMVEKGFEISIRDYTK------------SFFCMMLSNGFPPDQEICEVMLIAF 618
            A+     M+ K   IS     K                 ML      ++    +++ + 
Sbjct: 409 DALKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSL 468

Query: 619 HQGGDLGSVFELAAVMIKSGLLPD 642
            Q G +    E+  +M K    PD
Sbjct: 469 CQNGQVKDAIEMFELMPKYRCTPD 492


>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
 gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
          Length = 888

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/554 (25%), Positives = 256/554 (46%), Gaps = 28/554 (5%)

Query: 76  QSRLQD------AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           +SR +D      A   + + + +EFG  VV        Y K G    A+  F  M   G+
Sbjct: 232 ESRPEDWQAVVSAFERIPKPSRREFGLMVVY-------YAKRGDKHHARATFENMRARGI 284

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
            P+AF +  L+H   +A  M  AL    +M   G+E   +TYSIL  G+   +    A K
Sbjct: 285 EPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADK 344

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           + ++   K  + + + Y+ +I  +CQ GN++   +L   M   G    +  Y  ++    
Sbjct: 345 LFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYT 404

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
            +    + L +   ++  G +P +++Y  LI    K  KV KA+ +  EM S  I  N+ 
Sbjct: 405 VAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNK 464

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            +  ++ G         A   F+ +I S    D  +YN++++ + K+GN+  A++++ ++
Sbjct: 465 TYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERM 524

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            ++R+ PS  TF  +I GF   G +  A   LD ++  G  P+ +TY   ++    +  +
Sbjct: 525 KKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQV 584

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           +R +++L +M    I P   TYT++++G      + +A +    +   G+  D   Y T+
Sbjct: 585 ERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETL 644

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           +R+ CK   ++ A  +  +M    +   +  YNILIDG    GD+  A  L+  ++E  I
Sbjct: 645 LRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGI 704

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------------KSFF 596
                 +T+ I A C  GD+ +A     +M + G + +++ +T             ++  
Sbjct: 705 PPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALK 764

Query: 597 CM--MLSNGFPPDQ 608
           C   M S G  PD+
Sbjct: 765 CFEEMKSAGLKPDE 778



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/555 (24%), Positives = 253/555 (45%), Gaps = 41/555 (7%)

Query: 3   AFVYSRTGMVH---------DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---L 50
           AFV+  T +VH          A+  + +MK   L++++ TY+ L+     T+       L
Sbjct: 288 AFVF--TSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKL 345

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           + + K      N    S +I   CQ   +  A   ++E         +   +++M  Y  
Sbjct: 346 FKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTV 405

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
               +    +F  + + G  P   SY  LI+     G + +AL  + +M  HG++ +  T
Sbjct: 406 AQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKT 465

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           YS+L  GF  L   + A+ + + ++  G  PD   Y +L+  +C++GN++  +++ E M 
Sbjct: 466 YSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMK 525

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +  + +   +  ++     +G +  AL  L  M   G  P ++TY+ LI GL ++ +V 
Sbjct: 526 KERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVE 585

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A+ + ++M    I+PN   +  I+ G      I +A  YF  +  S    DV +Y  ++
Sbjct: 586 RAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 645

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
               K G +  A+ + R++  ++I  +   +N LI G+ + G V +A  L+  +K  G+ 
Sbjct: 646 RACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIP 705

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+  T+T+++NA C+ G++QR   ++QEM    + P   T+T +IKG  K      A++ 
Sbjct: 706 PNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKC 765

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCK----------------CK---------DLRKAFQL 505
            E+M   G+ PD+  Y+ ++ S                   C+         DLR A   
Sbjct: 766 FEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSVCREMFENDLTVDLRTAVHW 825

Query: 506 LNQMWLHNLEPTSAT 520
               WLH +E T   
Sbjct: 826 --SKWLHEIERTGGA 838



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/580 (22%), Positives = 252/580 (43%), Gaps = 18/580 (3%)

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           +++++      N +  + ++        ++ A+  ++E   +    +VV+ + +++ Y K
Sbjct: 276 FENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGK 335

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
              AE A  LF        + +   Y+ +IH  C +G+M+ A E   +M   G++     
Sbjct: 336 TNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDV 395

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y  +  G+ +         V ++L   G  P I++Y  LI  Y +IG V + L + + M 
Sbjct: 396 YHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEME 455

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           S G K N   YS+L++          A  +  +M   GL+PD   Y++L+   CK   + 
Sbjct: 456 SHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMD 515

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +AI+++  M  +R+ P++     I+ G      +  A    D +  S C   V+ YN +I
Sbjct: 516 RAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALI 575

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            G ++   +  AV +  ++    I+P+  T+  ++ G+  +G +  A      IK  GL+
Sbjct: 576 HGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLK 635

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
                Y T + A C+ G +Q  LA+ +EM  + I      Y ++I G  ++  + EA  L
Sbjct: 636 LDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADL 695

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           ++ M   G+ P+  T+ + I + CK  D+++A  ++ +M    L+P   T+  LI G   
Sbjct: 696 MKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAK 755

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTII-----KAHCAEGDVHKAMTFFC-QMVEKGF 584
                 A      ++   +   + AY  ++     +A   EG  +  +   C +M E   
Sbjct: 756 VSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSVCREMFENDL 815

Query: 585 EISIR------------DYTKSFFCMMLSNGFPPDQEICE 612
            + +R            + T       L   FPPD    E
Sbjct: 816 TVDLRTAVHWSKWLHEIERTGGALTEALQRIFPPDWNSSE 855



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/458 (22%), Positives = 205/458 (44%), Gaps = 55/458 (12%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W+ +     +   P    + +++  Y + G+        E M ++G + N   ++ L+ +
Sbjct: 238 WQAVVSAFERIPKPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHA 297

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
              +  +  AL  + EM++ GL+  +VTYSILI G  K +    A +L+ E         
Sbjct: 298 YAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKE--------- 348

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
                              A+   D+L       + ++Y+ +I  + + GN+  A +L R
Sbjct: 349 -------------------AKTKLDNL-------NGIIYSNIIHAHCQSGNMDRAEELVR 382

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++ E  I   I  ++S+++G+           + + +K  G  PS ++Y   +N Y + G
Sbjct: 383 EMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIG 442

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            + + LA+ +EME+  I   + TY+++I G         A  + EDM   G+ PD+  YN
Sbjct: 443 KVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYN 502

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++ +FCK  ++ +A ++  +M    ++P++ T+  +I+G  V GD+K A   L  ++  
Sbjct: 503 LLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRS 562

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
             + T + Y  +I     +  V +A++   +M       SI              G  P+
Sbjct: 563 GCAPTVMTYNALIHGLIRKHQVERAVSVLDKM-------SI-------------AGIAPN 602

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           +    +++  +   GD+G  FE    + +SGL  D ++
Sbjct: 603 EHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYI 640



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 134/280 (47%), Gaps = 24/280 (8%)

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            E+   PS   F  ++  + K G    AR   + ++  G+EP+A  +T+ ++AY    ++
Sbjct: 245 FERIPKPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDM 304

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           +  L+ ++EM+++ +  T VTY+++I G  K    + A +L ++        + I Y+ I
Sbjct: 305 RGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNI 364

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV--SLQEH 547
           I + C+  ++ +A +L+ +M    ++     Y+ ++ G  V  D K   CL+V   L+E 
Sbjct: 365 IHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKK--CLIVFERLKEC 422

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
               + ++Y  +I  +   G V KA+    +M   G + + + Y+      ML NGF   
Sbjct: 423 GFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYS------MLINGF--- 473

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                   I  H   D  + F +   MIKSGL PD+ + N
Sbjct: 474 --------IHLH---DFANAFSIFEDMIKSGLQPDRAIYN 502


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 155/607 (25%), Positives = 270/607 (44%), Gaps = 40/607 (6%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           R GM + A+  + ++K+   K S  TYN+L+      D +   +         R +  + 
Sbjct: 182 RNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAF------LVHREMSNSG 235

Query: 68  IVIDG---------LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
             +DG         LC+  R  DA+  L++   +EF P  V  N ++S  C+    + A 
Sbjct: 236 FRMDGCTLGCFAYSLCKAGRCGDALSLLEK---EEFVPDTVFYNRMVSGLCEASLFQEAM 292

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +   M      P+  +Y IL+ G    G +       + M   G  P+   ++ L   +
Sbjct: 293 DILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAY 352

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV------EEGLKLREVMLSQ 232
                 S A+K+ +K++  G  P  + Y + I   C    +      E   K    ML  
Sbjct: 353 CKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDL 412

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G  LN +  S     +C +G+ D+A  ++ EM + G  PD  TYS +I  LC   KV KA
Sbjct: 413 GVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKA 472

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
             L+ EM    I P+ + +  ++   C+  +I +AR +FD ++  NC  +VV Y  +I  
Sbjct: 473 FLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHA 532

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA----RRLLDTIKLHG 408
           Y+K   + +A +L+  ++ +   P++VT+ +LI G CK G++  A     R+   I+   
Sbjct: 533 YLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSD 592

Query: 409 LE------------PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           ++            P+ +TY   ++  C+   ++    LL  M      P  + Y  +I 
Sbjct: 593 IDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALID 652

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           G CK  KL+ A ++   M   G  P+  TY+++I S  K K L    ++L++M  ++  P
Sbjct: 653 GFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTP 712

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
               Y  +IDGLC  G  + A  L++ ++E       + YT +I      G + + +  +
Sbjct: 713 NVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELY 772

Query: 577 CQMVEKG 583
             M  KG
Sbjct: 773 RDMCSKG 779



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 151/541 (27%), Positives = 258/541 (47%), Gaps = 26/541 (4%)

Query: 67  SIVIDGLCQQSRLQDA-ILFLQETAGKEFGPSVVSLNAI-MSRY----CKLGFAEVAKGL 120
           +I I  +C    L  + +L L E A  E     V LN + +S +    C  G  + A  +
Sbjct: 381 NIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEI 440

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
            C M+  G  PD  +Y+ +I  LC A  +E+A     +M ++G+ P   TY+IL   F  
Sbjct: 441 ICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCK 500

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              I  A     ++L     P++VTYT LI  Y +   V +  KL E+ML +G K NV+ 
Sbjct: 501 AGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVT 560

Query: 241 YSVLLSSMCKSGRIDEALGLLYEM----EAVGLK------------PDLVTYSILIRGLC 284
           Y+ L+   CK+G+ID+A  +   M    E+  +             P+++TY  L+ GLC
Sbjct: 561 YTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLC 620

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K ++V +A +L + M      PN   + A++ G C+   +  A+  F  +       ++ 
Sbjct: 621 KANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLY 680

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            Y+ +I+   K   +   +++  +++E   +P++V +  +I G CK GK  +A RL+  +
Sbjct: 681 TYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKM 740

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           +  G  P+ +TYT  ++ + + G I++ L L ++M +K   P  +TY V+I   C    L
Sbjct: 741 EEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLL 800

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            EA +LL++M          +Y  II  F   ++   +  LL+++  +   P  + Y IL
Sbjct: 801 DEAHRLLDEMKQTYWPRHISSYRKIIEGF--NREFITSIGLLDELSENESVPVESLYRIL 858

Query: 525 IDGLCVNGDLKNADCLL--VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           ID     G L+ A  LL  +S         K  YT++I++      V KA   +  M+ K
Sbjct: 859 IDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINK 918

Query: 583 G 583
            
Sbjct: 919 N 919



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 242/540 (44%), Gaps = 62/540 (11%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S VI  LC  S+++ A L  +E       PSV +   ++  +CK G  + A+  F  M
Sbjct: 455 TYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEM 514

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L+    P+  +Y  LIH    A  + +A +    M   G +P+ +TY+ L  G     QI
Sbjct: 515 LRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQI 574

Query: 185 SGAWKVIQKLL--IKGSD--------------PDIVTYTVLICGYCQIGNVEEGLKLREV 228
             A ++  ++   I+ SD              P+I+TY  L+ G C+   VEE  +L + 
Sbjct: 575 DKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDT 634

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   G + N I Y  L+   CK+G+++ A  +  +M   G  P+L TYS LI  L K+ +
Sbjct: 635 MSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKR 694

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           +   +++ ++M     +PN   +  ++ GLC+     EA      +    C  +V+ Y  
Sbjct: 695 LDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTA 754

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK--- 405
           MIDG+ K+G I + ++LYR +  K  +P+ +T+  LI   C  G + +A RLLD +K   
Sbjct: 755 MIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTY 814

Query: 406 -----------LHGLEPSAVT-------------------YTTFMNAYCEEGNIQRLLAL 435
                      + G     +T                   Y   ++ + + G ++  L L
Sbjct: 815 WPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNL 874

Query: 436 LQEMETK---AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L+E+ +    A+   ++ YT +I+ L    K+ +A +L   M    V P+  T+  +I+ 
Sbjct: 875 LEEISSSPSLAVANKYL-YTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKG 933

Query: 493 FCKCKDLRKAFQLLN---QMWLH------NLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
             +    ++A QL +   QM  H      N + T A    +   L   G +K   C LVS
Sbjct: 934 LTRVGKWQEALQLSDSICQMVCHVCSNFVNYKTTRALPLCIKHFLISTGFMKRYQCELVS 993



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 232/503 (46%), Gaps = 31/503 (6%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRNVYTNSI 68
           V  A  +  +MK+  +  S+ TY  L+ +     ++    + +D++       NV T + 
Sbjct: 469 VEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTS 528

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM---- 124
           +I    +  ++ DA    +    +   P+VV+  A++  +CK G  + A  ++  M    
Sbjct: 529 LIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDI 588

Query: 125 ------LKYGLH------PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
                 + + L       P+  +Y  L+ GLC A  +EEA E  + M  +G EP+ I Y 
Sbjct: 589 ESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYD 648

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  GF    ++  A +V  K+  +G  P++ TY+ LI    +   ++  LK+   ML  
Sbjct: 649 ALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLEN 708

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
               NV+ Y+ ++  +CK G+ +EA  L+ +ME VG  P+++TY+ +I G  K  K+ + 
Sbjct: 709 SCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQC 768

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           ++LY +MCSK  +PN   +  ++   C   ++ EA    D +  +   + +  Y  +I+G
Sbjct: 769 LELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEG 828

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           + +      ++ L  +L E    P    +  LI  F K G++  A  LL+ I      PS
Sbjct: 829 FNR--EFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEI---SSSPS 883

Query: 413 AVT-----YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
                   YT+ + +      + +   L   M  K + P   T+  +IKGL +  K QEA
Sbjct: 884 LAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEA 943

Query: 468 VQLLEDM--YVIGVTPDQITYNT 488
           +QL + +   V  V  + + Y T
Sbjct: 944 LQLSDSICQMVCHVCSNFVNYKT 966



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 134/579 (23%), Positives = 234/579 (40%), Gaps = 77/579 (13%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N LI   C  G    ALE    +   G +    TY+ L + F    ++  A+ V +++  
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSN 233

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
            G   D  T        C+ G   + L L E    + F  + + Y+ ++S +C++    E
Sbjct: 234 SGFRMDGCTLGCFAYSLCKAGRCGDALSLLE---KEEFVPDTVFYNRMVSGLCEASLFQE 290

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+ +L  M ++   P++VTY IL+ G   + ++ +  ++ + M ++   PN     +++ 
Sbjct: 291 AMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVH 350

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI-------------------DGYVKL- 356
             C+    + A   F  +I   C    +LYNI I                     Y ++ 
Sbjct: 351 AYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEML 410

Query: 357 ---------------------GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                                G   +A ++  +++ K   P   T++ +I   C   KV 
Sbjct: 411 DLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVE 470

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L + +K +G+ PS  TYT  ++++C+ G IQ+      EM      P  VTYT +I
Sbjct: 471 KAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLI 530

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
               K  K+ +A +L E M + G  P+ +TY  +I   CK   + KA Q+  +M   ++E
Sbjct: 531 HAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQ-GDIE 589

Query: 516 -----------------PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
                            P   TY  L+DGLC    ++ A  LL ++  +     ++ Y  
Sbjct: 590 SSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDA 649

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---KSFF------------CMMLSNG 603
           +I   C  G +  A   F +M E+G+  ++  Y+    S F              ML N 
Sbjct: 650 LIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENS 709

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             P+  I   M+    + G     + L   M + G  P+
Sbjct: 710 CTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPN 748



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 189/418 (45%), Gaps = 21/418 (5%)

Query: 189 KVIQKLLIKGSDPD------IVTYTVLICGYCQIGNV--EEGLKLREVMLSQGFKLNVIA 240
           +V  K L++  D D      ++ + +  C    + NV  EE  +L++     G+K +   
Sbjct: 152 RVSHKFLMQIRDDDRELLRKLLNFLIQKCCRNGMWNVALEELGRLKDF----GYKASPTT 207

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+    ++ ++D A  +  EM   G + D  T       LCK  +   A+ L  +  
Sbjct: 208 YNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEK-- 265

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            +   P++  +  ++ GLCE  +  EA    D +   +CI +VV Y I++ G +  G +G
Sbjct: 266 -EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLG 324

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
              ++   ++ +   P+   FNSL++ +CK+   + A +L   +   G +P  + Y  F+
Sbjct: 325 RCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFI 384

Query: 421 NAYC--EEGNIQRLLALLQ----EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            + C  EE     LL L +    EM    +    V  +   + LC   K  +A +++ +M
Sbjct: 385 GSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEM 444

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G  PD  TY+ +I   C    + KAF L  +M  + + P+  TY ILID  C  G +
Sbjct: 445 MSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLI 504

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           + A      +   N +   V YT++I A+     V  A   F  M+ +G + ++  YT
Sbjct: 505 QQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYT 562



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 144/300 (48%), Gaps = 7/300 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           + +TG + +A  V  KM E     ++ TY+SL   L+  +  D++  +   +  +    N
Sbjct: 654 FCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPN 713

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V   + +IDGLC+  + ++A   + +       P+V++  A++  + K+G  E    L+ 
Sbjct: 714 VVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYR 773

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G  P+  +Y +LI+  C  G ++EA    ++M +        +Y  + +GF+   
Sbjct: 774 DMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFN--R 831

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LREVMLSQGFKL-NVIA 240
           +   +  ++ +L    S P    Y +LI  + + G +E  L  L E+  S    + N   
Sbjct: 832 EFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYL 891

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+ S+  + ++D+A  L   M    + P+L T+  LI+GL +  K  +A+QL + +C
Sbjct: 892 YTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSIC 951



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 98/275 (35%), Gaps = 25/275 (9%)

Query: 375 SPSIVTFNSLIYGFCKNGKVAD--ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
           S + V +N+LI   C N    D  + + L  I+    E         +   C  G     
Sbjct: 130 SHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRNGMWNVA 189

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L  L  ++      +  TY  +I+   +  KL  A  +  +M   G   D  T      S
Sbjct: 190 LEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYS 249

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            CK      A  LL +       P +  YN ++ GLC     + A  +L  ++  +    
Sbjct: 250 LCKAGRCGDALSLLEK---EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPN 306

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE 612
            V Y  ++     +G + +                     K    MM++ G  P++E+  
Sbjct: 307 VVTYRILLSGCLGKGQLGRC--------------------KRILSMMMTEGCYPNREMFN 346

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            ++ A+ +  D    ++L   MIK G  P   L N
Sbjct: 347 SLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYN 381


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 250/510 (49%), Gaps = 23/510 (4%)

Query: 22  MKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQD 81
           +K L        +N  LY LRH          +     P +V   + +I GL     +  
Sbjct: 61  LKSLSRSCKAGNFNESLYFLRHL---------VNKGHKP-DVVLCTKLIHGLFTSKTIDK 110

Query: 82  AI--LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
           AI  + + E  G    P +++ NAI++ +C+    + A  +   M   G  PD  +YNIL
Sbjct: 111 AIQVMHILENHGH---PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNIL 167

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           I  LC  G ++ ALEF N + +   +P  +TY+IL +   L   I  A K++ ++L    
Sbjct: 168 IGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINL 227

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            PD+ TY  +I G C+ G V+   ++   + S+G+  +VI Y++LL  +   G+ +    
Sbjct: 228 QPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYE 287

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           L+ +M A G + ++VTYS+LI  +C+  KV + + L  +M  K + P+ + +  ++  LC
Sbjct: 288 LMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALC 347

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           ++  +  A    D +I   C+ D+V YN ++    K     EA+ ++ +L E   SP+  
Sbjct: 348 KEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNAS 407

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL--Q 437
           ++NS+       G    A  ++  +   G++P  +TY + ++  C +G +   + LL   
Sbjct: 408 SYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDM 467

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR--SFCK 495
           EME+    P+ V+Y +V+ GLCK  ++ +A+++L  M   G  P++ TY  +I    F  
Sbjct: 468 EMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGG 527

Query: 496 C----KDLRKAFQLLNQMWLHNLEPTSATY 521
           C    +DL      ++ +  H+ E    T+
Sbjct: 528 CLNDARDLATTLVNMDAISEHSFERLYKTF 557



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 219/429 (51%), Gaps = 3/429 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I G C+ +R+  A   L     K F P +V+ N ++   C  G  + A      +LK  
Sbjct: 132 IITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKEN 191

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P   +Y ILI    + G ++EA++  ++M    ++PD  TY+ + +G      +  A+
Sbjct: 192 CKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAF 251

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++I  +  KG  PD++TY +L+ G    G  E G +L   M+++G + NV+ YSVL+SS+
Sbjct: 252 QIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSV 311

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C+ G+++E +GLL +M+  GLKPD   Y  LI  LCK+ +V  AI++ + M S    P+ 
Sbjct: 312 CRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDI 371

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             +  IL  LC+++   EA   F+ L    C  +   YN M       G+   A+ +  +
Sbjct: 372 VNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILE 431

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE--PSAVTYTTFMNAYCEE 426
           +++K + P  +T+NSLI   C++G V +A  LL  +++   E  PS V+Y   +   C+ 
Sbjct: 432 MLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKV 491

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
             +   + +L  M  K   P   TYT +I+G+     L +A  L   +  +    +  ++
Sbjct: 492 SRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISEH-SF 550

Query: 487 NTIIRSFCK 495
             + ++FCK
Sbjct: 551 ERLYKTFCK 559



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 243/508 (47%), Gaps = 40/508 (7%)

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +SR CK G    +      ++  G  PD      LIHGL  + ++++A++  + +  HG 
Sbjct: 64  LSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG- 122

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            PD I Y+ +  GF   ++I  A++V+ ++  KG  PDIVTY +LI   C  G ++  L+
Sbjct: 123 HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALE 182

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
            +  +L +  K  V+ Y++L+ +    G IDEA+ LL EM  + L+PD+ TY+ +IRG+C
Sbjct: 183 FKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMC 242

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           ++  V +A Q+ + + SK  +P+   +  +L GL  +            ++   C  +VV
Sbjct: 243 REGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVV 302

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            Y+++I    + G + E V L + + +K + P    ++ LI   CK G+V  A  +LD +
Sbjct: 303 TYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVM 362

Query: 405 KLHGLEPSAVTYTTFMNAYCEE-----------------------------------GNI 429
              G  P  V Y T +   C++                                   G+ 
Sbjct: 363 ISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHK 422

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG--VTPDQITYN 487
            R L ++ EM  K + P  +TY  +I  LC+   + EA++LL DM +      P  ++YN
Sbjct: 423 VRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYN 482

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++   CK   +  A ++L  M      P   TY  LI+G+   G L +A  L  +L   
Sbjct: 483 IVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNM 542

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           + ++++ ++  + K  C + DV++ +  
Sbjct: 543 D-AISEHSFERLYKTFC-KLDVYRQLNL 568



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 221/451 (49%), Gaps = 3/451 (0%)

Query: 144 CIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
           C AG+  E+L F   +   G +PD +  + L  G      I  A +V+  L   G  PD+
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH-PDL 126

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           + Y  +I G+C+   ++   ++ + M ++GF  +++ Y++L+ S+C  G +D AL    +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           +     KP +VTY+ILI     Q  + +A++L +EM    + P+ F + +I+ G+C +  
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           +  A     S+       DV+ YNI++ G +  G      +L   ++ +    ++VT++ 
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI   C++GKV +   LL  +K  GL+P    Y   + A C+EG +   + +L  M +  
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDG 366

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             P  V Y  ++  LCKQ +  EA+ + E +  +G +P+  +YN++  +        +A 
Sbjct: 367 CVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRAL 426

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS--LQEHNISLTKVAYTTIIK 561
            ++ +M    ++P   TYN LI  LC +G +  A  LLV   ++      + V+Y  ++ 
Sbjct: 427 GMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLL 486

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             C    V  A+     MV+KG   +   YT
Sbjct: 487 GLCKVSRVSDAIEVLAAMVDKGCRPNETTYT 517



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 212/447 (47%), Gaps = 18/447 (4%)

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+ GN  E L     ++++G K +V+  + L+  +  S  ID+A+ +++ +E  G  PDL
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           + Y+ +I G C+ +++  A Q+ + M +K  SP+   +  ++  LC + M+  A  + + 
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           L+  NC   VV Y I+I+  +  G I EA++L  +++E  + P + T+NS+I G C+ G 
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V  A +++ +I   G  P  +TY   +     +G  +    L+ +M  +      VTY+V
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I  +C+  K++E V LL+DM   G+ PD   Y+ +I + CK   +  A ++L+ M    
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDG 366

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
             P    YN ++  LC       A  +   L E   S    +Y ++  A  + G   +A+
Sbjct: 367 CVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRAL 426

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCM-----------------MLSNGFPPDQEICEVMLI 616
               +M++KG +     Y     C+                 M S+   P      ++L+
Sbjct: 427 GMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLL 486

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPDK 643
              +   +    E+ A M+  G  P++
Sbjct: 487 GLCKVSRVSDAIEVLAAMVDKGCRPNE 513


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 134/502 (26%), Positives = 256/502 (50%), Gaps = 2/502 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V++ S VI+ L +  +L DA+    E + +   P V   N ++  + K    ++A  L+
Sbjct: 183 DVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLW 242

Query: 122 CLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
             +L+   ++P+  ++NI+I GL   G +++ L+  + M ++  E D  TYS L  G   
Sbjct: 243 DKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCD 302

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A  V  +L+ + +  D+VTY  ++ G+C+ G ++E L+L  +M  Q   +N+++
Sbjct: 303 EGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIM-EQRNSVNIVS 361

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y++L+  + ++G+IDEA  +   M A G   D  TY I I GLC    V+KA+ +  E+ 
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVE 421

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           SK    + +A+ +I+  LC+K  + EA      +       +  + N +I G ++   + 
Sbjct: 422 SKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLS 481

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A  L R + +    P++V++N LI G C+ GK  +A   +  +  +GL+P   TY+  +
Sbjct: 482 DASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILL 541

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
              C +  I+  L L  +     + P  + + ++I GLC   KL +A+ ++ +M     T
Sbjct: 542 GGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            + +TYNT++  + K +D  +A  +   M+   L+P   +YN ++ GLC+   +  A   
Sbjct: 602 ANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEF 661

Query: 541 LVSLQEHNISLTKVAYTTIIKA 562
               + H I  T   +  +++A
Sbjct: 662 FDDARNHGIFPTVYTWNILVRA 683



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 248/506 (49%), Gaps = 4/506 (0%)

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAG 147
           ETAG    P++ + N ++   CK    E A+G    M K G  PD FSY+ +I+ L   G
Sbjct: 141 ETAG--VAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTG 198

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS-DPDIVTY 206
            +++ALE  ++M    V PD   Y+IL  GF        A ++  KLL   S  P++ T+
Sbjct: 199 KLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTH 258

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            ++I G  + G V++ LK+ + M     + ++  YS L+  +C  G +D+A  +  E+  
Sbjct: 259 NIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVE 318

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
                D+VTY+ ++ G C+  K+ ++++L+  M  +R S N  ++  ++ GL E   I E
Sbjct: 319 RKAFIDVVTYNTMLGGFCRCGKIKESLELWRIM-EQRNSVNIVSYNILIKGLLENGKIDE 377

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A M +  +       D   Y I I G    G + +A+ + +++  K     +  + S+I 
Sbjct: 378 ATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIID 437

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             CK  ++ +A  L+  +  HG+E ++      +     +  +     L++ M      P
Sbjct: 438 CLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLP 497

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
           T V+Y ++I GLC+  K  EA   +++M   G+ PD  TY+ ++   C+ + +  A +L 
Sbjct: 498 TVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELW 557

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           +Q     LEP    +NILI GLC  G L +A  ++ +++  N +   V Y T+++ +   
Sbjct: 558 HQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKV 617

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYT 592
            D ++A   +  M + G +  I  Y 
Sbjct: 618 RDSNRATVIWGYMYKMGLQPDIISYN 643



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 231/486 (47%), Gaps = 22/486 (4%)

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G EP   +Y+ L   F    Q      +       G  P++ TY VLI   C+    E+ 
Sbjct: 109 GCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
                 M  +GFK +V +YS +++ + K+G++D+AL L  EM    + PD+  Y+ILI G
Sbjct: 169 RGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDG 228

Query: 283 LCKQDKVHKAIQLYNEMCS-KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
             K+     A+QL++++     + PN   H  ++ GL +   + +    +D +  +   +
Sbjct: 229 FLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREK 288

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D+  Y+ +I G    GN+ +A  ++ +L+E++    +VT+N+++ GFC+ GK+ ++  L 
Sbjct: 289 DLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELW 348

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             ++      + V+Y   +    E G I     + + M  K     + TY + I GLC  
Sbjct: 349 RIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVN 407

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
             + +A+ +++++   G   D   Y +II   CK + L +A  L+ +M  H +E  S   
Sbjct: 408 GYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVC 467

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N LI GL  +  L +A  L+  + ++    T V+Y  +I   C  G   +A  F  +M+E
Sbjct: 468 NALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLE 527

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
            G +  ++ Y+      +L  G   D++I E+ L  +HQ              ++SGL P
Sbjct: 528 NGLKPDLKTYS------ILLGGLCRDRKI-ELALELWHQ-------------FLQSGLEP 567

Query: 642 DKFLIN 647
           D  + N
Sbjct: 568 DVMMHN 573



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 214/455 (47%), Gaps = 55/455 (12%)

Query: 22  MKELDLKVSIQTYNSLLY------NLRHTDIM-------------WDLYDDIKVSETPRN 62
           +KE D K+++Q ++ LL       N++  +IM               ++D +K +E  ++
Sbjct: 230 LKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKD 289

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           +YT S +I GLC +  +  A     E   ++    VV+ N ++  +C+ G  + +  L+ 
Sbjct: 290 LYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWR 349

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +M +     +  SYNILI GL   G ++EA      M   G   D  TY I   G  +  
Sbjct: 350 IMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNG 408

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN----- 237
            ++ A  V+Q++  KG   D+  Y  +I   C+   +EE   L + M   G +LN     
Sbjct: 409 YVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCN 468

Query: 238 ------------------------------VIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
                                         V++Y++L+  +C++G+  EA   + EM   
Sbjct: 469 ALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLEN 528

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           GLKPDL TYSIL+ GLC+  K+  A++L+++     + P+   H  ++ GLC    + +A
Sbjct: 529 GLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDA 588

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                ++   NC  ++V YN +++GY K+ +   A  ++  + +  + P I+++N+++ G
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKG 648

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            C   +V+ A    D  + HG+ P+  T+   + A
Sbjct: 649 LCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRA 683



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 139/267 (52%), Gaps = 10/267 (3%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETA--GKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           +VY  + +ID LC++ RL++A   ++E +  G E    V   NA++    +      A  
Sbjct: 428 DVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVC--NALIGGLIRDSRLSDASL 485

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M K G  P   SYNILI GLC AG   EA  F  +M  +G++PD  TYSIL  G  
Sbjct: 486 LMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLC 545

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +I  A ++  + L  G +PD++ + +LI G C +G +++ + +   M  +    N++
Sbjct: 546 RDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605

Query: 240 AYSVLLSSMCK---SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            Y+ L+    K   S R     G +Y+M   GL+PD+++Y+ +++GLC   +V  AI+ +
Sbjct: 606 TYNTLMEGYFKVRDSNRATVIWGYMYKM---GLQPDIISYNTILKGLCLCHRVSYAIEFF 662

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEM 323
           ++  +  I P  +    ++  +  ++M
Sbjct: 663 DDARNHGIFPTVYTWNILVRAVVNRKM 689



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 166/355 (46%), Gaps = 10/355 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL------RHTDIMWDLYDDIKVSET 59
           + R G + +++ +   M++ +  V+I +YN L+  L          ++W L   +     
Sbjct: 335 FCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRL---MPAKGY 390

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             +  T  I I GLC    +  A+  +QE   K     V +  +I+   CK    E A  
Sbjct: 391 AADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASN 450

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M K+G+  ++   N LI GL     + +A      MG++G  P  ++Y+IL  G  
Sbjct: 451 LVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLC 510

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +   A   ++++L  G  PD+ TY++L+ G C+   +E  L+L    L  G + +V+
Sbjct: 511 EAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVM 570

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            +++L+  +C  G++D+A+ ++  ME      +LVTY+ L+ G  K    ++A  ++  M
Sbjct: 571 MHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYM 630

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
               + P+  ++  IL GLC    ++ A  +FD          V  +NI++   V
Sbjct: 631 YKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVV 685



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 10/198 (5%)

Query: 390 KNGKVADARRLLDTIKLH-GLEPSAVTYTTFMNAYCEE---GNIQRLLALLQEMETKAIG 445
           KN + A A  L D+   H G   SAV Y   +    E     ++ R++ L++  E K   
Sbjct: 21  KNPRAAFA--LFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQECKCDE 78

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMY-VIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
              ++   VIK   K      A+ + + M  + G  P   +YNT++ +F + K   K   
Sbjct: 79  DVALS---VIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVES 135

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           L        + P   TYN+LI   C   + + A   L  + +        +Y+T+I    
Sbjct: 136 LFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLA 195

Query: 565 AEGDVHKAMTFFCQMVEK 582
             G +  A+  F +M E+
Sbjct: 196 KTGKLDDALELFDEMSER 213


>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 913

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 235/497 (47%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS      ++  Y K G    A+  F  M   G+ P+AF +  L+H   +A  M  AL  
Sbjct: 275 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 334

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
           T +M   G+E   +TYSIL  GF  ++    A  + ++      D + + Y+ +I  +CQ
Sbjct: 335 TEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQ 394

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            GN++   +L   M   G    + AY  ++          + L +   ++     P +++
Sbjct: 395 SGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIIS 454

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y  LI    K  KV KAI +  EM S  I  N+  +  ++ G       T A   F+ ++
Sbjct: 455 YGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEML 514

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            S    D  +YN++I+ + K+GN+  A+++  ++ ++R+ PS   F  +I GF   G + 
Sbjct: 515 KSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMK 574

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  +LD ++  G  P+ +TY   ++    +  ++R +++L +M    I P   TYT+++
Sbjct: 575 RALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIM 634

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           +G      + +A +    +   G+  D   Y T++R+ CK   ++ A  +  +M    + 
Sbjct: 635 RGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIA 694

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
             +  YNILIDG    GD+  A  L+  ++E  +      YT+ I A C  GD+ +A T 
Sbjct: 695 RNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTV 754

Query: 576 FCQMVEKGFEISIRDYT 592
             +M + G + +++ YT
Sbjct: 755 IDEMSDVGLKPNLKTYT 771



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 246/503 (48%), Gaps = 14/503 (2%)

Query: 3   AFVYSRTGMVH---------DAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDL 50
           AFV+  T +VH          A+    +MK   ++++I TY+ L+     +  T    +L
Sbjct: 312 AFVF--TSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNL 369

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           + + K +    N    S +I   CQ   +  A   + E         + + +++M  Y  
Sbjct: 370 FKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTI 429

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           +   +    +F  + +    P   SY  LI+     G + +A+  + +M   G++ +  T
Sbjct: 430 IQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKT 489

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           YS+L  GF  L   + A+++ +++L  G  PD   Y +LI  +C++GN++  +++ E M 
Sbjct: 490 YSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQ 549

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +  + +  A+  ++     +G +  AL +L  M   G  P ++TY+ LI GL ++++V 
Sbjct: 550 KERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVE 609

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A+ + N+M    I+PN   +  I+ G      I +A  YF  +       DV +Y  ++
Sbjct: 610 RAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLL 669

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
               K G +  A+ + R++  ++I+ +   +N LI G+ + G V +A  L+  +K  G+ 
Sbjct: 670 RACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVP 729

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+  TYT+++NA C+ G++QR   ++ EM    + P   TYT +IKG  +      A++ 
Sbjct: 730 PNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKC 789

Query: 471 LEDMYVIGVTPDQITYNTIIRSF 493
            E+M + G+ PD+  Y+ ++ S 
Sbjct: 790 FEEMKLAGLKPDEAAYHCLVTSL 812



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 136/582 (23%), Positives = 260/582 (44%), Gaps = 18/582 (3%)

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           +++++      N +  + ++        ++ A+   +E   +    ++V+ + ++S + K
Sbjct: 300 FENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGK 359

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           +   + A  LF          +   Y+ +IH  C +G+M+ A E  ++M   G++     
Sbjct: 360 INDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDA 419

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y  +  G+ ++        V ++L      P I++Y  LI  Y +IG V + + + + M 
Sbjct: 420 YHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEME 479

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           S G K N   YS+L+S          A  +  EM   GL+PD   Y++LI   CK   + 
Sbjct: 480 SSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMD 539

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +AI++  +M  +R+ P++ A   I+ G      +  A    D +  S C   V+ YN +I
Sbjct: 540 RAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALI 599

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            G ++   +  AV +  ++    I+P+  T+  ++ G+   G +A A      IK  GL+
Sbjct: 600 HGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLK 659

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
                Y T + A C+ G +Q  LA+ +EM ++ I      Y ++I G  ++  + EA  L
Sbjct: 660 LDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADL 719

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           ++ M   GV P+  TY + I + CK  D+++A  ++++M    L+P   TY  LI G   
Sbjct: 720 MKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWAR 779

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTII-----KAHCAEGDVHKAMTFFC-QMVEKGF 584
                 A      ++   +   + AY  ++     +A   EG  +  +   C +M E   
Sbjct: 780 ASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSVCREMFENDL 839

Query: 585 EISIR---DYTKSFFCMMLSNG---------FPPDQEICEVM 614
            + +R    +++    + ++ G         FPPD    EV+
Sbjct: 840 TVDMRTAVHWSRWLHKIEMTGGALTEALQRIFPPDWNSFEVL 881



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/401 (23%), Positives = 182/401 (45%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W+ +     +   P    + ++I  Y + G+        E M ++G + N   ++ L+ +
Sbjct: 262 WQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHA 321

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
              +  +  AL    EM+A G++  +VTYSILI G  K +    A  L+ E  +     N
Sbjct: 322 YAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLN 381

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  I+   C+   +  A      +        +  Y+ M+ GY  + +  + + ++ 
Sbjct: 382 GIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFE 441

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           +L E   +PSI+++  LI  + K GKVA A  +   ++  G++ +  TY+  ++ +    
Sbjct: 442 RLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLH 501

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           +      + +EM    + P    Y ++I+  CK   +  A+++LE M    + P    + 
Sbjct: 502 DFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFR 561

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            II  F    D+++A  +L+ M      PT  TYN LI GL     ++ A  +L  +   
Sbjct: 562 PIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIA 621

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
            I+  +  YT I++ + A GD+ KA  +F ++ E G ++ +
Sbjct: 622 GITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDV 662



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/391 (19%), Positives = 171/391 (43%), Gaps = 15/391 (3%)

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           KP    + ++I    K+   H A   +  M ++ I PN+F   +++        +  A  
Sbjct: 274 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 333

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             + +        +V Y+I+I G+ K+ +   A  L+++        + + ++++I+  C
Sbjct: 334 CTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHC 393

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           ++G +  A  L+  ++  G++     Y + M+ Y    + ++ L + + ++     P+ +
Sbjct: 394 QSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSII 453

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           +Y  +I    K  K+ +A+ + ++M   G+  +  TY+ +I  F    D   AF++  +M
Sbjct: 454 SYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEM 513

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               L+P  A YN+LI+  C  G++  A  +L  +Q+  +  +  A+  II+     GD+
Sbjct: 514 LKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDM 573

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN---------------GFPPDQEICEVM 614
            +A+     M   G   ++  Y      ++  N               G  P++    ++
Sbjct: 574 KRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTII 633

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           +  +   GD+   FE    + + GL  D ++
Sbjct: 634 MRGYAATGDIAKAFEYFTKIKEGGLKLDVYI 664



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 3/292 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVS 57
           +L   + + G +  A+ ++ KM++  ++ S + +  ++        M    D+ D ++ S
Sbjct: 527 LLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRS 586

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
                V T + +I GL ++++++ A+  L + +     P+  +   IM  Y   G    A
Sbjct: 587 GCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKA 646

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              F  + + GL  D + Y  L+   C +G M+ AL  T +M    +  +   Y+IL  G
Sbjct: 647 FEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDG 706

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +     +  A  +++++   G  P+I TYT  I   C+ G+++    + + M   G K N
Sbjct: 707 WARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPN 766

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           +  Y+ L+    ++   D AL    EM+  GLKPD   Y  L+  L  +  V
Sbjct: 767 LKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATV 818



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 145/312 (46%), Gaps = 33/312 (10%)

Query: 361 EAVQLYRQLIEKRIS--------------PSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           EA + +R+++E R                PS   F  +I  + K G    AR   + ++ 
Sbjct: 246 EACREFRRVVESRPEDWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRA 305

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+EP+A  +T+ ++AY    +++  L+  +EM+ + I  T VTY+++I G  K    Q 
Sbjct: 306 RGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQS 365

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A  L ++        + I Y+ II + C+  ++ +A +L+++M    ++     Y+ ++ 
Sbjct: 366 ADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMH 425

Query: 527 GLCVNGDLKNADCLLV--SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           G  +  D K   CL+V   L+E   + + ++Y  +I  +   G V KA+    +M   G 
Sbjct: 426 GYTIIQDEKK--CLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGI 483

Query: 585 E-------------ISIRDYTKSF--FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
           +             I + D+T +F  F  ML +G  PD+ I  +++ AF + G++     
Sbjct: 484 KHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIR 543

Query: 630 LAAVMIKSGLLP 641
           +   M K  + P
Sbjct: 544 ILEKMQKERMQP 555



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 3/218 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT-DIM--WDLYDDIKVSETPRNVY 64
           R   V  AV V+ KM    +  +  TY  ++     T DI   ++ +  IK      +VY
Sbjct: 604 RKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVY 663

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
               ++   C+  R+Q A+   +E + ++   +    N ++  + + G    A  L   M
Sbjct: 664 IYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQM 723

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G+ P+  +Y   I+  C AG M+ A    ++M   G++P+  TY+ L KG+   S  
Sbjct: 724 KEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLP 783

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
             A K  +++ + G  PD   Y  L+        V EG
Sbjct: 784 DRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEG 821


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 203/372 (54%)

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            G +PD +TY ++  G         A+ ++ K+     +P ++ Y  +I G C+  ++++
Sbjct: 10  KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 69

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            L L + M ++G + NV+ YS L+S +C  GR  +A  LL +M    + PD+ T+S LI 
Sbjct: 70  ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 129

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
              K+ K+ +A +LY+EM  + I P+   + +++ G C  + + EA+  F+ ++  +C  
Sbjct: 130 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 189

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           DVV YN +I G+ K   + E ++++R++ ++ +  + VT+N LI G  + G    A+ + 
Sbjct: 190 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 249

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +   G+ P+ +TY T ++  C+ G +++ + + + ++   + PT  TY ++I+G+CK 
Sbjct: 250 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 309

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            K+++   L  ++ + GV PD + YNT+I  FC+     +A  L  +M      P S  Y
Sbjct: 310 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 369

Query: 522 NILIDGLCVNGD 533
           N LI     +GD
Sbjct: 370 NTLIRARLRDGD 381



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 200/395 (50%)

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           +I +++ KG  PD+VTY V++ G C+ G+ +    L   M     +  V+ Y+ ++  +C
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K   +D+AL L  EME  G++P++VTYS LI  LC   +   A +L ++M  ++I+P+ F
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
              A++    ++  + EA   +D ++  +    +V Y+ +I+G+     + EA Q++  +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           + K   P +VT+N+LI GFCK  +V +   +   +   GL  + VTY   +    + G+ 
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
                + +EM +  + P  +TY  ++ GLCK  KL++A+ + E +    + P   TYN +
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I   CK   +   + L   + L  ++P    YN +I G C  G  + AD L   ++E   
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
                 Y T+I+A   +GD   +     +M   GF
Sbjct: 363 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 397



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 200/361 (55%)

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           + L + M+++G + +++ Y V+++ +CK G  D A  LL +ME   L+P ++ Y+ +I G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           LCK   +  A+ L+ EM +K I PN   + +++  LC     ++A      +I      D
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           V  ++ +ID +VK G + EA +LY +++++ I PSIVT++SLI GFC + ++ +A+++ +
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +      P  VTY T +  +C+   ++  + + +EM  + +    VTY ++I+GL +  
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
               A ++ ++M   GV P+ +TYNT++   CK   L KA  +   +    +EPT  TYN
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           I+I+G+C  G +++   L  +L    +    VAY T+I   C +G   +A   F +M E 
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360

Query: 583 G 583
           G
Sbjct: 361 G 361



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 205/408 (50%), Gaps = 4/408 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M+  G  PD  +Y ++++GLC  G  + A    N M +  +EP  + Y+ +  G      
Sbjct: 7   MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A  + +++  KG  P++VTY+ LI   C  G   +  +L   M+ +    +V  +S 
Sbjct: 67  MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+ +  K G++ EA  L  EM    + P +VTYS LI G C  D++ +A Q++  M SK 
Sbjct: 127 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 186

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+   +  ++ G C+ + + E    F  +     + + V YNI+I G  + G+   A 
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 246

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +++++++   + P+I+T+N+L+ G CKNGK+  A  + + ++   +EP+  TY   +   
Sbjct: 247 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 306

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ G ++    L   +  K + P  V Y  +I G C++   +EA  L ++M   G  P+ 
Sbjct: 307 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 366

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT----YNILIDG 527
             YNT+IR+  +  D   + +L+ +M        ++T     N+L DG
Sbjct: 367 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 414



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 200/390 (51%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P +V+   +++  CK G  ++A  L   M +  L P    YN +I GLC    M++AL  
Sbjct: 14  PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 73

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M   G+ P+ +TYS L        + S A +++  ++ +  +PD+ T++ LI  + +
Sbjct: 74  FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 133

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G + E  KL + M+ +    +++ YS L++  C   R+DEA  +   M +    PD+VT
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 193

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI+G CK  +V + ++++ EM  + +  N+  +  ++ GL +      A+  F  ++
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 +++ YN ++DG  K G + +A+ ++  L   ++ P+I T+N +I G CK GKV 
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 313

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           D   L   + L G++P  V Y T ++ +C +G+ +   AL +EM+     P    Y  +I
Sbjct: 314 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 373

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +   +    + + +L+++M   G   D  T
Sbjct: 374 RARLRDGDREASAELIKEMRSCGFAGDAST 403



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 194/380 (51%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T  +V++GLC++     A   L +    +  P V+  N I+   CK    + A  LF
Sbjct: 15  DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 74

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G+ P+  +Y+ LI  LC  G   +A    +DM    + PD  T+S L   F   
Sbjct: 75  KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 134

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A K+  +++ +  DP IVTY+ LI G+C    ++E  ++ E M+S+    +V+ Y
Sbjct: 135 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 194

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   CK  R++E + +  EM   GL  + VTY+ILI+GL +      A +++ EM S
Sbjct: 195 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 254

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             + PN   +  +L GLC+   + +A + F+ L  S     +  YNIMI+G  K G + +
Sbjct: 255 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 314

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
              L+  L  K + P +V +N++I GFC+ G   +A  L   +K  G  P++  Y T + 
Sbjct: 315 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 374

Query: 422 AYCEEGNIQRLLALLQEMET 441
           A   +G+ +    L++EM +
Sbjct: 375 ARLRDGDREASAELIKEMRS 394



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 191/400 (47%), Gaps = 15/400 (3%)

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           + L+  M A G +PDLVTY +++ GLCK+     A  L N+M   ++ P    +  I+ G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC+ + + +A   F  +       +VV Y+ +I      G   +A +L   +IE++I+P 
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           + TF++LI  F K GK+ +A +L D +    ++PS VTY++ +N +C    +     + +
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            M +K   P  VTY  +IKG CK  +++E +++  +M   G+  + +TYN +I+   +  
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
           D   A ++  +M    + P   TYN L+DGLC NG L+ A  +   LQ   +  T   Y 
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSN 602
            +I+  C  G V      FC +  KG +  +  Y    S FC              M  +
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           G  P+      ++ A  + GD  +  EL   M   G   D
Sbjct: 361 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 400



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 199/372 (53%)

Query: 44  TDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNA 103
           TD+ ++L + ++  +    V   + +IDGLC+   + DA+   +E   K   P+VV+ ++
Sbjct: 32  TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 91

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           ++S  C  G    A  L   M++  ++PD F+++ LI      G + EA +  ++M +  
Sbjct: 92  LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 151

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           ++P  +TYS L  GF +  ++  A ++ + ++ K   PD+VTY  LI G+C+   VEEG+
Sbjct: 152 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 211

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           ++   M  +G   N + Y++L+  + ++G  D A  +  EM + G+ P+++TY+ L+ GL
Sbjct: 212 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 271

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CK  K+ KA+ ++  +   ++ P  + +  ++ G+C+   + +    F +L +     DV
Sbjct: 272 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 331

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V YN MI G+ + G+  EA  L++++ E    P+   +N+LI    ++G    +  L+  
Sbjct: 332 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 391

Query: 404 IKLHGLEPSAVT 415
           ++  G    A T
Sbjct: 392 MRSCGFAGDAST 403



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 183/358 (51%), Gaps = 3/358 (0%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A  ++ KM++  L+  +  YN+++  L   +H D   +L+ +++      NV T S +I 
Sbjct: 35  AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 94

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
            LC   R  DA   L +   ++  P V + +A++  + K G    A+ L+  M+K  + P
Sbjct: 95  CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 154

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
              +Y+ LI+G C+   ++EA +    M      PD +TY+ L KGF    ++    +V 
Sbjct: 155 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 214

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           +++  +G   + VTY +LI G  Q G+ +   ++ + M+S G   N++ Y+ LL  +CK+
Sbjct: 215 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 274

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G++++A+ +   ++   ++P + TY+I+I G+CK  KV     L+  +  K + P+  A+
Sbjct: 275 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 334

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
             ++ G C K    EA   F  +     + +   YN +I   ++ G+   + +L +++
Sbjct: 335 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 392



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 141/298 (47%), Gaps = 15/298 (5%)

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L  +++ K   P +VT+  ++ G CK G    A  LL+ ++   LEP  + Y T ++  C
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +  ++   L L +EMETK I P  VTY+ +I  LC   +  +A +LL DM    + PD  
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           T++ +I +F K   L +A +L ++M   +++P+  TY+ LI+G C++  L  A  +   +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG---------------FEISIR 589
              +     V Y T+IK  C    V + M  F +M ++G               F+    
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           D  +  F  M+S+G PP+      +L    + G L     +   + +S + P  +  N
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 141/285 (49%), Gaps = 15/285 (5%)

Query: 3   AFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIK------V 56
           AFV  + G + +A  +  +M +  +  SI TY+SL+        M D  D+ K      V
Sbjct: 130 AFV--KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF----CMHDRLDEAKQMFEFMV 183

Query: 57  SET--PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           S+   P +V T + +I G C+  R+++ +   +E + +    + V+ N ++    + G  
Sbjct: 184 SKHCFP-DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           ++A+ +F  M+  G+ P+  +YN L+ GLC  G +E+A+     + R  +EP   TY+I+
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
            +G     ++   W +   L +KG  PD+V Y  +I G+C+ G+ EE   L + M   G 
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
             N   Y+ L+ +  + G  + +  L+ EM + G   D  T  ++
Sbjct: 363 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 407



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)

Query: 30  SIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           +I TYN+LL  L     +     +++ ++ S+    +YT +I+I+G+C+  +++D     
Sbjct: 260 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 319

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
              + K   P VV+ N ++S +C+ G  E A  LF  M + G  P++  YN LI      
Sbjct: 320 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 379

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           G  E + E   +M   G   DA T  ++    H
Sbjct: 380 GDREASAELIKEMRSCGFAGDASTIGLVTNMLH 412


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 159/609 (26%), Positives = 282/609 (46%), Gaps = 57/609 (9%)

Query: 35  NSLLYNL-RH--TDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAG 91
           NSLL  L +H   +I   +YD++       + YT  I++ GLC++ +++D    +++  G
Sbjct: 141 NSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWG 200

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           +   P++V  N ++  YCK G  E A  LF  +   G  P   +Y  +I+G C  G  E 
Sbjct: 201 RGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEV 260

Query: 152 ALEFTNDMGRHGVEPDAITYS-ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
             +   +M   G++     Y+ I+   F    +I  A   +  ++  G DPD+ TY +LI
Sbjct: 261 VDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAA-DTVGWMIKSGCDPDMATYNILI 319

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C  G V +  +L E  + +G   N ++Y+ L+ + CK G    AL LL +M   G K
Sbjct: 320 TGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHK 379

Query: 271 PDLVTYS-----------------------------------ILIRGLCKQDKVHKAIQL 295
           PDLVTY+                                   +L+ GLCK+ ++  A  L
Sbjct: 380 PDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVL 439

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
             EM  + ++P++F    ++ G        EA+  F+  I       VV YN MI GY K
Sbjct: 440 LAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCK 499

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G + +A+  ++++I+   SP   T++++I G+ K   +  A R+   +     +P+ VT
Sbjct: 500 FGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVT 559

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           YT  +N +C  G+I R     ++M +  + P  VTYT++I   CK   L +A    E M 
Sbjct: 560 YTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQML 619

Query: 476 VIGVTPDQITYNTIIRSFCKCKDL----RKAFQLLNQMWLHNL--------EPTSATYNI 523
           +    P+ +TYN ++       D     +++ Q  N + L +         +  +A+YN 
Sbjct: 620 MEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNS 679

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG---DVHKAMTFFCQMV 580
           ++  LC +  +K+A  L   +         V+   ++   C EG   D +  ++  C++ 
Sbjct: 680 ILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVIS--CKLN 737

Query: 581 EKGFEISIR 589
           E+  +++++
Sbjct: 738 ERELQVAVK 746



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 160/614 (26%), Positives = 265/614 (43%), Gaps = 63/614 (10%)

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK-YGLHPDAFSYNILIHGLCIAGSME 150
           K+  P+  + + ++S +   G  + A   +   +K +   PD FS N L++ L   G +E
Sbjct: 95  KDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVE 154

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            A +  ++M     E D  T  I+ KG     ++   WK+I+K   +G  P+IV Y  LI
Sbjct: 155 IACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLI 214

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL- 269
            GYC+ G+ E    L + +  +GF   V  Y  +++  CK G+ +    LL EM   GL 
Sbjct: 215 DGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLD 274

Query: 270 ----------------------------------KPDLVTYSILIRGLCKQDKVHKAIQL 295
                                              PD+ TY+ILI G C   +VHKA QL
Sbjct: 275 VSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQL 334

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
             +   + + PN  ++  ++   C++     A      +       D+V Y  +I G + 
Sbjct: 335 LEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIV 394

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G +  A+ +  +++EK + P    +N L+ G CK G++  A+ LL  +    + P A  
Sbjct: 395 AGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFI 454

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
             T ++ +   G+ +    L +    K I P  V Y  +IKG CK   +++A+   + M 
Sbjct: 455 TATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMI 514

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
               +PD+ TY+TII  + K  DL  A ++   M     +P   TY +LI+G C++GD+ 
Sbjct: 515 QGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDIN 574

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV-EK------------ 582
            A+     +    +    V YT +I   C   ++ KA +FF QM+ EK            
Sbjct: 575 RAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLM 634

Query: 583 -------GFEISIRDYTKS-------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
                   F IS +   ++        F MM+S+G+         +LI   Q   +    
Sbjct: 635 NGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHAL 694

Query: 629 ELAAVMIKSGLLPD 642
            L   M+  G LPD
Sbjct: 695 HLRDKMMSKGFLPD 708



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/561 (25%), Positives = 259/561 (46%), Gaps = 50/561 (8%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P  V+ N++ IDG C++   + A +  +E   K F P+V +  AI++ +CK G  EV   
Sbjct: 205 PNIVFYNTL-IDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDK 263

Query: 120 LFC-----------------------------------LMLKYGLHPDAFSYNILIHGLC 144
           L                                      M+K G  PD  +YNILI G C
Sbjct: 264 LLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSC 323

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
             G + +A +      + G+ P+ ++Y+ L   +    +   A  ++ K+  +G  PD+V
Sbjct: 324 SCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLV 383

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TY  LI G    G V+  L +R  M+ +G   +   Y+VL+S +CK GR+  A  LL EM
Sbjct: 384 TYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEM 443

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
               + PD    + L+ G  +     +A +L+     K I P    + A++ G C+  M+
Sbjct: 444 LDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMM 503

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            +A + F  +I      D   Y+ +IDGY+K+ ++  A++++  +++    P++VT+  L
Sbjct: 504 KDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLL 563

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I GFC +G +  A +    +    L+P+ VTYT  +  +C+  N+ +  +  ++M  +  
Sbjct: 564 INGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKC 623

Query: 445 GPTHVTYTVVIKGLC---------KQWKLQEAVQLLED---MYVIGVTPDQITYNTIIRS 492
            P  VTY  ++ GL          ++ +  E   +LE    M   G      +YN+I+  
Sbjct: 624 LPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILIC 683

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL-VSLQEHNISL 551
            C+ K ++ A  L ++M      P   +   L+ GLC+ G  ++ + ++   L E  + +
Sbjct: 684 LCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQV 743

Query: 552 TKVAYTTIIKAHCAEGDVHKA 572
             V Y+  + A  ++G   +A
Sbjct: 744 A-VKYSEKLDAFLSQGQTSEA 763



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 170/363 (46%), Gaps = 16/363 (4%)

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQDVVLYNIMIDGYVKLG 357
           M SK + P   A   ++    +  ++  A  ++ + I + +C+ DV   N +++  VK G
Sbjct: 92  MKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHG 151

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            +  A ++Y +++++       T   ++ G CK GKV D  +L++     G  P+ V Y 
Sbjct: 152 KVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYN 211

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T ++ YC++G+ +R   L +E++ K   PT  TY  +I G CK+ K +   +LL +M   
Sbjct: 212 TLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSER 271

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+      YN II +  K     +A   +  M     +P  ATYNILI G C  G++  A
Sbjct: 272 GLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKA 331

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
           + LL    +  +   KV+YT +I  +C +G+  +A+    +M E+G +  +  Y      
Sbjct: 332 EQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHG 391

Query: 598 M---------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +               M+  G  PD  I  V++    + G L +   L A M+   + PD
Sbjct: 392 LIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPD 451

Query: 643 KFL 645
            F+
Sbjct: 452 AFI 454



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 187/446 (41%), Gaps = 19/446 (4%)

Query: 215 QIGNVEEGLKLREVMLSQ---GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
           QI + E GL+       Q   G  LN  + S LL  + +     E   LL  M++  L P
Sbjct: 40  QIHDPEMGLEFFHWASKQSNCGNYLNEFSCSSLLRLLARRRLFSEVESLLKIMKSKDLMP 99

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCS-KRISPNSFAHGAILLGLCEKEMITEARMY 330
               +S++I        V +A++ Y          P+ F+  ++L  L +   +  A   
Sbjct: 100 TREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKV 159

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
           +D ++  N   D     IM+ G  K G + +  +L  +   +   P+IV +N+LI G+CK
Sbjct: 160 YDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCK 219

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G    A  L   +K+ G  P+  TY   +N +C++G  + +  LL EM  + +  +   
Sbjct: 220 KGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHI 279

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  +I    K     EA   +  M   G  PD  TYN +I   C C ++ KA QLL Q  
Sbjct: 280 YNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAI 339

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              L P   +Y  LI   C  G+   A  LL+ + E       V Y  +I      G+V 
Sbjct: 340 KRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVD 399

Query: 571 KAMTFFCQMVEKGF--EISIRDYTKSFFCM-------------MLSNGFPPDQEICEVML 615
            A+T   +MVEKG   + +I +   S  C              ML     PD  I   ++
Sbjct: 400 VALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLV 459

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLP 641
             F + GD     +L  + I+ G+ P
Sbjct: 460 DGFIRHGDFEEAKKLFELTIEKGIDP 485



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 122/284 (42%), Gaps = 21/284 (7%)

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT-IKLHGLEPSAVTYTTF 419
           E   L + +  K + P+   F+ +I  F   G V  A     T IK+H   P   +  + 
Sbjct: 84  EVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSL 143

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +N   + G ++    +  EM  +     + T  +++KGLCK+ K+++  +L+E  +  G 
Sbjct: 144 LNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGC 203

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+ + YNT+I  +CK  D  +A  L  ++ +    PT  TY  +I+G C  G  +  D 
Sbjct: 204 MPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDK 263

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           LLV + E  + ++   Y  II A                     F+   R         M
Sbjct: 264 LLVEMSERGLDVSIHIYNNIIDAQ--------------------FKHGCRIEAADTVGWM 303

Query: 600 LSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           + +G  PD     +++      G++    +L    IK GLLP+K
Sbjct: 304 IKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNK 347


>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
 gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 263/525 (50%), Gaps = 3/525 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA-EVAKGL 120
           +VY  + +I       R ++A++  ++   +   P++++ N I++ Y K+G      KGL
Sbjct: 32  DVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGL 91

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSM-EEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           F  M   G+ PD ++YN LI   C  GS+ EEA     DM   G  PD +TY+ L   + 
Sbjct: 92  FEGMKNAGVLPDEYTYNTLIT-CCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYG 150

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +   A +V++++ + G  P IVTY  LI  Y + G ++E ++L+  M+  G  L+V 
Sbjct: 151 KSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVF 210

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ LLS   ++G+ + A+ +  EM A G KP++ T++ LI+    + K  + ++++ E+
Sbjct: 211 TYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEI 270

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            +    P+      +L    +  M +E    F  +  +  + +   YN +I  Y + G+ 
Sbjct: 271 KNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSF 330

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A+ +Y++++E  I+P + T+N+++    + G    + ++   +K    +P+ +TY + 
Sbjct: 331 DQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSL 390

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++AY     I R+LAL +E+ +  I P  V    ++    K   L EA     ++   G 
Sbjct: 391 LHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGF 450

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           +PD  T N ++  + + +   K  ++LN M      P+ ATYN L+     + + + ++ 
Sbjct: 451 SPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEE 510

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +L  +    I    ++Y T+I A+C  G + +A   F +M E G 
Sbjct: 511 VLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGL 555



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/583 (22%), Positives = 250/583 (42%), Gaps = 4/583 (0%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVY 64
            G   +AV V  KM+E   K ++ TYN +L       + W+    L++ +K +    + Y
Sbjct: 46  NGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEY 105

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I    + S  ++A    ++     F P  V+ NA++  Y K    + A  +   M
Sbjct: 106 TYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREM 165

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G  P   +YN LI      G ++EA+E  N M   G+  D  TY+ L  GF    + 
Sbjct: 166 EVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKD 225

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +V  ++   G  P+I T+  LI  +   G   E +K+ E + +     +++ ++ L
Sbjct: 226 ESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTL 285

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L+   ++G   E  G+  EM+  G  P+  TY+ LI    +     +A+ +Y  M    I
Sbjct: 286 LAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGI 345

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +P+   + A+L  L    +  ++   F  +    C  + + Y  ++  Y     IG  + 
Sbjct: 346 TPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLA 405

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L  ++    I P  V   +L+    K   + +A      +K  G  P   T    ++ Y 
Sbjct: 406 LAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYG 465

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
                 +   +L  M      P+  TY  ++    +    + + ++L+++   G+ PD I
Sbjct: 466 RRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTI 525

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           +YNT+I ++C+   +++A ++ ++M    L P   TYN  +     +   ++A  ++  +
Sbjct: 526 SYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYM 585

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
            +H     +  Y +++  +C       A+ F   + E    IS
Sbjct: 586 IKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISSLHELDPHIS 628



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 136/572 (23%), Positives = 248/572 (43%), Gaps = 40/572 (6%)

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           I+S   K G   VA  L   + K G   D ++Y  LI      G   EA+     M   G
Sbjct: 4   IISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLL----IKGSDPDIVTYTVLICGYCQIGNV 219
            +P  ITY+++    ++  ++   W  I+ L       G  PD  TY  LI   C+ G++
Sbjct: 64  CKPTLITYNVI---LNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLIT-CCRRGSL 119

Query: 220 -EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
            EE   + + M S GF  + + Y+ LL    KS R  EA+ +L EME  G  P +VTY+ 
Sbjct: 120 HEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNS 179

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           LI    +   + +A++L N+M    I+ + F +  +L G         A   F  +  + 
Sbjct: 180 LISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAG 239

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           C  ++  +N +I  +   G   E ++++ ++      P IVT+N+L+  F +NG  ++  
Sbjct: 240 CKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVS 299

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            +   +K  G  P   TY T ++AY   G+  + + + + M    I P   TY  V+  L
Sbjct: 300 GVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAAL 359

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
            +    +++ ++  +M      P+++TY +++ ++   K++ +   L  ++    +EP +
Sbjct: 360 ARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHA 419

Query: 519 ATYNILIDGLCVNGDLKNADC-LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
                L+        L N+ C LLV  +   + L +  ++  +    A   ++     F 
Sbjct: 420 VLLKTLV--------LVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFT 471

Query: 578 Q-------MVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVML 615
           +       M E GF  S+  Y               ++     +L+ G  PD      ++
Sbjct: 472 KTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVI 531

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            A+ + G +     + + M +SGL+PD    N
Sbjct: 532 FAYCRNGRMKEASRIFSEMRESGLVPDVITYN 563



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/515 (22%), Positives = 228/515 (44%), Gaps = 40/515 (7%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
           VY ++    +A+ V+ +M+      SI TYNSL+                          
Sbjct: 148 VYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLI-------------------------- 181

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            ++   DGL     L++A+    +         V +   ++S + + G  E A  +F  M
Sbjct: 182 -SAYARDGL-----LKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEM 235

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF---HLL 181
              G  P+  ++N LI      G   E ++   ++      PD +T++ L   F    + 
Sbjct: 236 RAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMD 295

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           S++SG +K +++    G  P+  TY  LI  Y + G+ ++ + + + ML  G   ++  Y
Sbjct: 296 SEVSGVFKEMKR---AGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTY 352

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +L+++ + G  +++  +  EM+    KP+ +TY  L+       ++ + + L  E+CS
Sbjct: 353 NAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICS 412

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             I P++     ++L   + +++ EA + F  L       D+   N M+  Y +     +
Sbjct: 413 GVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTK 472

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
             ++   + E   +PS+ T+NSL+Y   ++     +  +L  I   G++P  ++Y T + 
Sbjct: 473 TNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIF 532

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           AYC  G ++    +  EM    + P  +TY   +         ++A+ ++  M   G  P
Sbjct: 533 AYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKP 592

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           +Q TYN+++  +CK      A   ++   LH L+P
Sbjct: 593 NQNTYNSVVDGYCKHNHRDDAIMFISS--LHELDP 625



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/368 (22%), Positives = 158/368 (42%), Gaps = 23/368 (6%)

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +++I  L K+ KV  A  L N++       + +A+ +++          EA M F  +  
Sbjct: 2   AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQ-LYRQLIEKRISPSIVTFNSLIYGFCKNGKV- 394
             C   ++ YN++++ Y K+G     ++ L+  +    + P   T+N+LI   C+ G + 
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLI-TCCRRGSLH 120

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +A  +   +K  G  P  VTY   ++ Y +    +  + +L+EME     P+ VTY  +
Sbjct: 121 EEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSL 180

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I    +   L+EA++L   M   G+  D  TY T++  F +      A ++  +M     
Sbjct: 181 ISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGC 240

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
           +P   T+N LI    ++G+      ++   +E             IK  C   D+    T
Sbjct: 241 KPNICTFNALIK---MHGNRGKFAEMMKVFEE-------------IKNSCCVPDIVTWNT 284

Query: 575 FFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
                 + G +  +       F  M   GF P+++    ++ A+ + G      ++   M
Sbjct: 285 LLAVFGQNGMDSEV----SGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRM 340

Query: 635 IKSGLLPD 642
           +++G+ PD
Sbjct: 341 LEAGITPD 348



 Score = 42.4 bits (98), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 82/210 (39%), Gaps = 18/210 (8%)

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            V+I  L K+ K+  A  LL D++  G   D   Y ++I +       R+A  +  +M  
Sbjct: 2   AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNA-DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              +PT  TYN++++     G   N    L   ++   +   +  Y T+I   C  G +H
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITC-CRRGSLH 120

Query: 571 -KAMTFFCQMVEKGF-------EISIRDYTKS--------FFCMMLSNGFPPDQEICEVM 614
            +A   F  M   GF          +  Y KS            M  NG  P       +
Sbjct: 121 EEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSL 180

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           + A+ + G L    EL   M++ G+  D F
Sbjct: 181 ISAYARDGLLKEAMELKNQMVEGGINLDVF 210



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 7/89 (7%)

Query: 4   FVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKV-----SE 58
           F Y R G + +A  + ++M+E  L   + TYN+ + +     +  D  D ++       +
Sbjct: 532 FAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCK 591

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
             +N Y +  V+DG C+ +   DAI+F+ 
Sbjct: 592 PNQNTYNS--VVDGYCKHNHRDDAIMFIS 618


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 193/342 (56%)

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
           EF  ++  +G  P+   ++IL  GF  +  +  A  V  ++  +G  P +V++  LI GY
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C+  NVEEG  L+ VM S+    +V  YS L++ +CK  R++EA GL  EM  +GL P+ 
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNG 331

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           VT++ LI G CK  K+  A++ +  M  + I P+   + A++ GLC    + EAR   + 
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNE 391

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +I +    D + +  ++DG  K G++  A+++  +++E+ I    V F +LI G C++G+
Sbjct: 392 MIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGR 451

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           V DA R+L  +   G +P   TYT  ++ +C++G+++    LL+EM+     P  VTY  
Sbjct: 452 VRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNA 511

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           ++ G CKQ +++ A  LL  M  + V P+ IT+N ++   CK
Sbjct: 512 LMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCK 553



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 189/339 (55%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           +L  G+  NV  +++L+   CK G +  A  +  E+   GL+P +V+++ LI G C+   
Sbjct: 217 VLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKN 276

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V +   L + M S+RISP+ F + A++ GLC++  + EA   FD +     + + V +  
Sbjct: 277 VEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTT 336

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDG  K G I  A++ +  + ++ I P ++T+N+LI G C++G + +AR+LL+ +  +G
Sbjct: 337 LIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNG 396

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
            +P  +T+TT M+  C++G++   L +   M  + I    V +T +I GLC+  ++++A 
Sbjct: 397 FKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAE 456

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           ++L+DM   G  PD  TY  +I  FCK  D++   +LL +M      P   TYN L++G 
Sbjct: 457 RMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGF 516

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           C  G +KNA  LL ++    +    + +  ++  HC  G
Sbjct: 517 CKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 193/360 (53%)

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
           +L +   L  Q    W+   ++L  G  P++  + +L+ G+C+IG+V     + + +  +
Sbjct: 196 LLRRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRR 255

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G + +V++++ L+S  C+S  ++E   L   ME+  + PD+ TYS LI GLCK+ +V +A
Sbjct: 256 GLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEA 315

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
             L++EMC   + PN      ++ G C+   I  A   F+ +       D++ YN +I+G
Sbjct: 316 NGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALING 375

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
             + G++ EA +L  ++I     P  +TF +L+ G CK+G +  A  + D +   G+E  
Sbjct: 376 LCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELD 435

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            V +T  ++  C +G ++    +L++M +    P   TYT+VI   CK+  ++   +LL+
Sbjct: 436 DVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLK 495

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +M   G  P  +TYN ++  FCK   ++ A  LL+ M    + P   T+NIL+DG C +G
Sbjct: 496 EMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 209/424 (49%), Gaps = 7/424 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVS 57
           L   Y+ +  + DA+  +  +K+ +  + +   + LL  +    +     W+ Y ++   
Sbjct: 161 LIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVLDY 220

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
             P NVY  +I++ G C+   + +A +   E + +   PSVVS N ++S YC+    E  
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L  +M    + PD F+Y+ LI+GLC    +EEA    ++M   G+ P+ +T++ L  G
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                +I  A +  + +  +G  PD++TY  LI G C+ G+++E  KL   M+  GFK +
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            I ++ L+   CK G +D AL +   M   G++ D V ++ LI GLC+  +V  A ++  
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLK 460

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M S    P+   +  ++   C+K  +         +     +  VV YN +++G+ K G
Sbjct: 461 DMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQG 520

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            +  A  L   ++   + P+ +TFN L+ G CK+G   D  ++ +  K  GL     +YT
Sbjct: 521 QMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDF-KIFNGEK--GLVSDYASYT 577

Query: 418 TFMN 421
             +N
Sbjct: 578 ALVN 581



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 181/344 (52%)

Query: 85  FLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
           F  E     + P+V   N +M  +CK+G    A+ +F  + + GL P   S+N LI G C
Sbjct: 213 FYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYC 272

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
            + ++EE     + M    + PD  TYS L  G    S++  A  +  ++   G  P+ V
Sbjct: 273 RSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGV 332

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           T+T LI G C+ G ++  L+  E+M  +G + ++I Y+ L++ +C+ G + EA  LL EM
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEM 392

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              G KPD +T++ L+ G CK   +  A+++ + M  + I  +  A  A++ GLC    +
Sbjct: 393 IGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRV 452

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            +A      ++ +    D   Y ++ID + K G++    +L +++      P +VT+N+L
Sbjct: 453 RDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNAL 512

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + GFCK G++ +A+ LL  +    + P+ +T+   ++ +C+ G+
Sbjct: 513 MNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGS 556



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 175/370 (47%), Gaps = 9/370 (2%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK--QDKVHKAIQ 294
           +V+ +  L+ +   S  I++A+  L  ++       +     L+R + K  Q   H   +
Sbjct: 154 SVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGH-CWE 212

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
            Y E+      PN +    ++ G C+   +  ARM FD +        VV +N +I GY 
Sbjct: 213 FYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYC 272

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           +  N+ E   L   +  +RISP + T+++LI G CK  +V +A  L D +   GL P+ V
Sbjct: 273 RSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGV 332

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           T+TT ++  C+ G I   L   + M+ + I P  +TY  +I GLC+   L+EA +LL +M
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEM 392

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G  PD+IT+ T++   CK  D+  A ++ ++M    +E     +  LI GLC +G +
Sbjct: 393 IGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRV 452

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
           ++A+ +L  +           YT +I   C +GDV        +M   G    +  Y   
Sbjct: 453 RDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYN-- 510

Query: 595 FFCMMLSNGF 604
                L NGF
Sbjct: 511 ----ALMNGF 516



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 153/297 (51%), Gaps = 15/297 (5%)

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           G   + Y ++++    P++  FN L++GFCK G V +AR + D I   GL PS V++ T 
Sbjct: 208 GHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTL 267

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ YC   N++    L   ME++ I P   TY+ +I GLCK+ +++EA  L ++M  +G+
Sbjct: 268 ISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGL 327

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+ +T+ T+I   CK   +  A +    M    + P   TYN LI+GLC +GDLK A  
Sbjct: 328 VPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARK 387

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC 597
           LL  +  +     K+ +TT++   C +GD+  A+    +MVE+G E+    +T   S  C
Sbjct: 388 LLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLC 447

Query: 598 M-------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                         MLS G  PD     +++  F + GD+    +L   M + G +P
Sbjct: 448 RDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVP 504



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/300 (21%), Positives = 127/300 (42%), Gaps = 21/300 (7%)

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK-NGKVADARR 399
             V++++ +I  Y     I +A+Q  R + +   S  +   + L+    K N +      
Sbjct: 153 HSVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWE 212

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
               +  +G  P+   +   M+ +C+ G++     +  E+  + + P+ V++  +I G C
Sbjct: 213 FYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYC 272

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           +   ++E   L   M    ++PD  TY+ +I   CK   + +A  L ++M    L P   
Sbjct: 273 RSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGV 332

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           T+  LIDG C +G +  A      +++  I    + Y  +I   C +GD+ +A     +M
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEM 392

Query: 580 VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
           +                     NGF PD+     ++    + GD+ S  E+   M++ G+
Sbjct: 393 I--------------------GNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGI 432


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 261/559 (46%), Gaps = 24/559 (4%)

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLKYGL--HPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
           A++    K    + AK +  LM K  +   P+AF Y ++ +    AG +  A+     M 
Sbjct: 139 AMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSR--AGKLRNAMRXLTMMQ 196

Query: 161 RHGVEPDAITYSILAKGFHLL---SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           + G+EPD    SI     H+L   +++  A + ++++ I    P+++TY  LI GYC + 
Sbjct: 197 KAGIEPD---LSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLH 253

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTY 276
            +E+  +L   M  +G   + I+Y  ++  +CK  RI E   L+ +M +   L PD VTY
Sbjct: 254 RLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTY 313

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           +  +  L K     +A++   E   +R   +   + AI+   C +  + +A+   + +  
Sbjct: 314 NTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFS 373

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
             CI DVV Y  +I+G  +   + +A ++ RQ+ +    P+ V++ +L+ G CKNG   +
Sbjct: 374 KGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLE 433

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           AR +++  +     P+A+TY+  M+ +  EG       L++EM  K   PT V   ++I+
Sbjct: 434 AREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQ 493

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
            LC++ K+ EA + +E     G   + + + T+I  FC+  DL  A  LL+ M+L N  P
Sbjct: 494 SLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHP 553

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV------- 569
              TY  +ID L   G ++ A  L + +       T V Y T+I  +C  G V       
Sbjct: 554 DVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLL 613

Query: 570 ------HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
                  +  T + Q++EK       +        +L      D   C +++ ++   G 
Sbjct: 614 EKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGI 673

Query: 624 LGSVFELAAVMIKSGLLPD 642
               + +A  M    L+PD
Sbjct: 674 PLMSYNVACRMFNRNLIPD 692



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/546 (26%), Positives = 258/546 (47%), Gaps = 6/546 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           YSR G + +A+  +  M++  ++  +   N+ ++ L      D      + +++ E   N
Sbjct: 179 YSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPN 238

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +I G C   RL+DA   + E   K   P  +S   +M   CK    +  + L  
Sbjct: 239 VITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLME 298

Query: 123 LMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            MLK   L PD  +YN  +H L   G  +EALEF  +        D + YS +   F   
Sbjct: 299 KMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCRE 358

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A +++ ++  KG  PD+VTYT +I G CQ   V++  K+   M   G K N ++Y
Sbjct: 359 GRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSY 418

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL+ +CK+G   EA  ++   E     P+ +TYS+L+ G  ++ K  +A  L  EM  
Sbjct: 419 TALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIK 478

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K   P       ++  LC++E + EA+ + +  + + C  +VV +  +I G+ +  ++  
Sbjct: 479 KGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEA 538

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ L   +      P +VT+ ++I    K G++ +A +L   +   G  P+ VTY T ++
Sbjct: 539 ALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIH 598

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            YC  G ++ LL LL++M ++        Y  VI+ LC    L++A +LL  +       
Sbjct: 599 QYCRMGRVEDLLKLLEKMLSRQ--ECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKI 656

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D  T + +I S+        ++ +  +M+  NL P       +   L + G  + AD L+
Sbjct: 657 DANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLI 716

Query: 542 VSLQEH 547
           +   E 
Sbjct: 717 LRFVER 722



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/476 (23%), Positives = 220/476 (46%), Gaps = 21/476 (4%)

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           D I Y  + +         GA +V++ +  +  +     +  ++  Y + G +   ++  
Sbjct: 133 DPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXL 192

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
            +M   G + ++   +  +  +    R+D+A+  L  M+ V + P+++TY+ LI+G C  
Sbjct: 193 TMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDL 252

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM-SNCIQDVVL 345
            ++  A +L  EM  K  SP+  ++  ++  LC+++ I E R+  + ++  SN + D V 
Sbjct: 253 HRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVT 312

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN  +    K G+  EA++  R+  E+R     V ++++++ FC+ G++  A+ +++ + 
Sbjct: 313 YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 372

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             G  P  VTYT+ +N  C+E  + +   +L++M      P  V+YT ++ GLCK     
Sbjct: 373 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSL 432

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA +++         P+ ITY+ ++  F +     +A  L+ +M      PT    N+LI
Sbjct: 433 EAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLI 492

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
             LC    +  A   +     +  ++  V +TT+I   C + D+  A++    M      
Sbjct: 493 QSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY----- 547

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                         LSN   PD      ++ A  + G +    +LA  M++ G +P
Sbjct: 548 --------------LSNKH-PDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIP 588


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 252/491 (51%), Gaps = 21/491 (4%)

Query: 26  DLKVSIQTYNSLLYNLRHT--------DIMWDLYDDIKVSETPRNVYT----NSIVID-- 71
           +L+ S+  + SL+ N  H         D+++ +Y D  + E    V+     N + ID  
Sbjct: 122 NLRCSVSDFVSLIDNRFHEPKFVEKLCDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDR 181

Query: 72  -------GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
                   L +  ++  ++ F ++    +   +V S+  ++   CK G  E AK L   M
Sbjct: 182 SCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEM 241

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G+ P+  +YN L++        E   E    M    V  +A TY++L + +    +I
Sbjct: 242 TGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKI 301

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A KV +K+L +G + DI  +T +I   C++GN++    L + +  +G   N   Y  L
Sbjct: 302 AEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGAL 361

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   C SG++D A  L+ EM++ GL  +LV ++ LI G CK+  + +A+++ + M  K  
Sbjct: 362 IHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGF 421

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             + F +  I  GLC+     EA+ +  +++      + V + IMID + K GN+ EA +
Sbjct: 422 ENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAER 481

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +++ + +K   P++VT+N+LI G+ K GK+ +A RL D ++  G+     TYTT ++  C
Sbjct: 482 VFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGEC 541

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             G ++  L LL E+  K +  + VTYT +I GL K+ + +EA +L ++M   G+TPD  
Sbjct: 542 VFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDR 601

Query: 485 TYNTIIRSFCK 495
            Y +++ +  K
Sbjct: 602 VYTSLVANLHK 612



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 201/410 (49%)

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
           G F  M+++ +    +S  I+I GLC  G +E A +   +M   G++P+ +TY+ L   +
Sbjct: 201 GFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAY 260

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             +    G  ++++ + +     +  TYT+LI  Y   G + E  K+ E ML +G + ++
Sbjct: 261 IKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADI 320

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             ++ ++S  CK G +  A  L  E+   GL  +  TY  LI G C   ++  A  L NE
Sbjct: 321 HVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNE 380

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M S+ +  N      ++ G C+K MI EA    D +       D+  YN +  G  KL  
Sbjct: 381 MQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNR 440

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             EA +    ++EK + P+ V+F  +I   CK G + +A R+   +K  G +P+ VTY T
Sbjct: 441 HEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNT 500

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++ Y ++G ++    L  EME+  +     TYT ++ G C   K++EA+ LL ++   G
Sbjct: 501 LIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKG 560

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +    +TY  II    K     +AF+L ++M    L P    Y  L+  L
Sbjct: 561 LAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANL 610



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 222/441 (50%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F  M+  GL  D  S  + +  L  +  M  +L F   M    V+    + +I+  G  
Sbjct: 167 VFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLC 226

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A  ++ ++  KG  P++VTY  L+  Y +I + E   ++  +M       N  
Sbjct: 227 KKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAA 286

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y++L+     SG+I EA  +  +M   G++ D+  ++ +I   CK   + +A  L++E+
Sbjct: 287 TYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDEL 346

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             + +  N+  +GA++ G C    +  A M  + +       ++V++N +I+GY K G I
Sbjct: 347 NERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMI 406

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA+++   + +K     I T+N++  G CK  +  +A+R L T+   G++P+AV++T  
Sbjct: 407 DEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIM 466

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ +C+EGN+     + Q+M+ K   P  VTY  +I G  K+ KL+EA +L ++M  IG+
Sbjct: 467 IDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGM 526

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           T D  TY T++   C    + +A  LLN++    L  +  TY  +I GL   G  + A  
Sbjct: 527 TSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFR 586

Query: 540 LLVSLQEHNISLTKVAYTTII 560
           L   +    ++     YT+++
Sbjct: 587 LYDEMMAAGLTPDDRVYTSLV 607



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 122/253 (48%), Gaps = 17/253 (6%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN----------LRHTDIMWDLYDDIKVSE 58
           +G +  A  ++ +M+   L +++  +N+L+            LR  D+M       +   
Sbjct: 368 SGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVM-------EKKG 420

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +++T + +  GLC+ +R ++A  +L     K   P+ VS   ++  +CK G    A+
Sbjct: 421 FENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAE 480

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M K G  P+  +YN LI G    G ++EA    ++M   G+  D  TY+ L  G 
Sbjct: 481 RVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGE 540

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
            +  ++  A  ++ ++  KG    IVTYT +I G  + G  EE  +L + M++ G   + 
Sbjct: 541 CVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDD 600

Query: 239 IAYSVLLSSMCKS 251
             Y+ L++++ K+
Sbjct: 601 RVYTSLVANLHKT 613



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 5/211 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR 61
           Y + GM+ +A+ +   M++   +  I TYN++   L    RH +    L+  ++    P 
Sbjct: 400 YCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDP- 458

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  + +I+ID  C++  L +A    Q+   K   P+VV+ N ++  Y K G  + A  L 
Sbjct: 459 NAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLK 518

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G+  D ++Y  L+HG C+ G +EEAL   N++ R G+    +TY+ +  G    
Sbjct: 519 DEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKE 578

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
            +   A+++  +++  G  PD   YT L+  
Sbjct: 579 GRSEEAFRLYDEMMAAGLTPDDRVYTSLVAN 609



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 3/142 (2%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLY---DDIKVSETPR 61
           ++ + G + +A  V   MK+   K ++ TYN+L+        + + Y   D+++      
Sbjct: 469 IHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTS 528

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++YT + ++ G C   ++++A+  L E   K    S+V+  AI+S   K G +E A  L+
Sbjct: 529 DIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLY 588

Query: 122 CLMLKYGLHPDAFSYNILIHGL 143
             M+  GL PD   Y  L+  L
Sbjct: 589 DEMMAAGLTPDDRVYTSLVANL 610


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 195/360 (54%)

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           PD ITY+IL +     S +  A K++ ++  +G  PD+VTY VL+ G C+ G ++E +K 
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
              M S G + NVI ++++L SMC +GR  +A  LL EM   G  P +VT++ILI  LC+
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
           +  + +AI +  +M +   +PNS ++  +L G C+++ +  A  Y + ++   C  D+V 
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN M+    K G +  AV+L  QL  K  SP ++T+N++I G  K GK   A  LL  ++
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             GL+P  +TY++ +     EG ++  +    ++E   + P   TY  ++ GLCK  +  
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
            A+  L  M   G  P +++Y  +I         ++A +LLN++    +   S+   +++
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 199/373 (53%)

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +V+ + L K   PD++TYT+LI   C    V + +KL + M S+G K +V+ Y+VL++ M
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CK GR+DEA+  L  M + G +P+++T++I++R +C   +   A +L  EM  K  SP+ 
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
                ++  LC K ++  A    + +    C  + + YN ++ G+ K   +  A+Q    
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           ++ +   P IVT+N+++   CK+GKV  A  LL+ +   G  P  +TY T ++   + G 
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
             + + LL EM  K + P  +TY+ +I GL ++ K++EA++   D+   GV P+  TYN+
Sbjct: 242 TDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNS 301

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           I+   CK +   +A   L  M     +PT  +Y ILI+G+   G  K A  LL  L    
Sbjct: 302 IMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361

Query: 549 ISLTKVAYTTIIK 561
           +     A   +++
Sbjct: 362 VVKKSSAEQVVVR 374



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 194/362 (53%)

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
           +PD  +Y ILI   C    + +A++  ++MG  G +PD +TY++L  G     ++  A K
Sbjct: 13  YPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIK 72

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
            +  +   GS P+++T+ +++   C  G   +  KL   M+ +G   +V+ +++L++ +C
Sbjct: 73  FLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLC 132

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           + G +  A+ +L +M   G  P+ ++Y+ L+ G CK+ K+ +AIQ    M S+   P+  
Sbjct: 133 RKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIV 192

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            +  +L  LC+   +  A    + L    C   ++ YN +IDG  K+G   +AV+L  ++
Sbjct: 193 TYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEM 252

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
             K + P ++T++SLI G  + GKV +A +    ++  G++P+A TY + M   C+    
Sbjct: 253 RGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQT 312

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
            R +  L  M +K   PT V+YT++I+G+  +   +EA++LL ++   GV         +
Sbjct: 313 DRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVV 372

Query: 490 IR 491
           +R
Sbjct: 373 VR 374



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 184/347 (53%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +VI Y++L+ + C    + +A+ LL EM + G KPD+VTY++L+ G+CK+ ++ +AI+  
Sbjct: 15  DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           N M S    PN   H  IL  +C      +A      ++   C   VV +NI+I+   + 
Sbjct: 75  NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G +G A+ +  ++     +P+ +++N L++GFCK  K+  A + L+ +   G  P  VTY
Sbjct: 135 GLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTY 194

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            T + A C++G +   + LL ++ +K   P  +TY  VI GL K  K  +AV+LL +M  
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRG 254

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+ PD ITY+++I    +   + +A +  + +    ++P + TYN ++ GLC       
Sbjct: 255 KGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDR 314

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           A   L  +       T+V+YT +I+    EG   +A+    ++  +G
Sbjct: 315 AIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 180/325 (55%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L D++       +V T +++++G+C++ RL +AI FL         P+V++ N I+   C
Sbjct: 38  LLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMC 97

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
             G    A+ L   M++ G  P   ++NILI+ LC  G +  A++    M  HG  P+++
Sbjct: 98  STGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSL 157

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+ L  GF    ++  A + ++ ++ +G  PDIVTY  ++   C+ G V+  ++L   +
Sbjct: 158 SYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQL 217

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
            S+G    +I Y+ ++  + K G+ D+A+ LL+EM   GLKPD++TYS LI GL ++ KV
Sbjct: 218 SSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKV 277

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            +AI+ ++++    + PN+F + +I+ GLC+ +    A  +   +I   C    V Y I+
Sbjct: 278 EEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTIL 337

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRI 374
           I+G    G   EA++L  +L  + +
Sbjct: 338 IEGIANEGLAKEALELLNELCSRGV 362



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 168/322 (52%)

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD++TY+ILI   C +  V +A++L +EM S+   P+   +  ++ G+C++  + EA  +
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            +S+       +V+ +NI++      G   +A +L  +++ K  SPS+VTFN LI   C+
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G +  A  +L+ +  HG  P++++Y   ++ +C+E  + R +  L+ M ++   P  VT
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y  ++  LCK  K+  AV+LL  +   G +P  ITYNT+I    K     +A +LL++M 
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              L+P   TY+ LI GL   G ++ A      ++   +      Y +I+   C      
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 571 KAMTFFCQMVEKGFEISIRDYT 592
           +A+ F   M+ KG + +   YT
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYT 335



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 178/348 (51%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T +I+I+  C +S +  A+  L E   +   P VV+ N +++  CK G  + A    
Sbjct: 15  DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M  YG  P+  ++NI++  +C  G   +A +   +M R G  P  +T++IL       
Sbjct: 75  NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             +  A  +++K+   G  P+ ++Y  L+ G+C+   ++  ++  E+M+S+G   +++ Y
Sbjct: 135 GLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTY 194

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +L+++CK G++D A+ LL ++ + G  P L+TY+ +I GL K  K  +A++L +EM  
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRG 254

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           K + P+   + +++ GL  +  + EA  +F  +       +   YN ++ G  K      
Sbjct: 255 KGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDR 314

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           A+     +I K   P+ V++  LI G    G   +A  LL+ +   G+
Sbjct: 315 AIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 129/276 (46%), Gaps = 3/276 (1%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRNVYT 65
           TG   DA  ++ +M       S+ T+N L+  L    ++    D+ + +       N  +
Sbjct: 99  TGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLS 158

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + ++ G C++ ++  AI +L+    +   P +V+ N +++  CK G  + A  L   + 
Sbjct: 159 YNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLS 218

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G  P   +YN +I GL   G  ++A+E  ++M   G++PD ITYS L  G     ++ 
Sbjct: 219 SKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVE 278

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A K    +   G  P+  TY  ++ G C+    +  +     M+S+G K   ++Y++L+
Sbjct: 279 EAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILI 338

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
             +   G   EAL LL E+ + G+        +++R
Sbjct: 339 EGIANEGLAKEALELLNELCSRGVVKKSSAEQVVVR 374


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 249/496 (50%), Gaps = 7/496 (1%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           ++ S  P +V   + ++  LC++ R  DA   ++         + V+ +A+   YC++G 
Sbjct: 79  VESSLCPPDVALANRLVRDLCRRGRPADAARVVEACGS---AATAVTYSALADGYCRVGR 135

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            + A+ +   M    + P A++YN L+H LC+ G + +AL   ++M   G  PD +TY+I
Sbjct: 136 LDEARRVVDGM---PVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNI 192

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L +          A ++I  + ++G  P  VTY V++ G C+ G+V+   +L   + S G
Sbjct: 193 LLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYG 252

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              N + Y+ +L  +  +GR ++   L+ EM +    P   T S++I  LC++    +AI
Sbjct: 253 CTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAI 312

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           +L  +M     + N   + A++ GLCE+  +  A     ++    C  ++  YNI++ G 
Sbjct: 313 RLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGL 372

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
                  +A  L  ++ +    P I+TFN++I   C+ G    A  +   +   G  P++
Sbjct: 373 CNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNS 432

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTY++ +    + G +++ L LL EM +K   P  + Y ++ + L ++ KL EA+Q++  
Sbjct: 433 VTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNP-EINYHLLAECLNEEDKLVEAIQMVHK 491

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           +   G++P  + YNTI+   C+     +A  +L+ M      P  +TY+ILI GL   G 
Sbjct: 492 LQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGY 551

Query: 534 LKNADCLLVSLQEHNI 549
           +K A  LL +L   ++
Sbjct: 552 MKEARELLSTLSSRDV 567



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 209/426 (49%), Gaps = 1/426 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + Y  + ++  LC + +++DA++ L     +   P VV+ N ++   CK      A  L 
Sbjct: 151 SAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELI 210

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            LM   G  P   +YN+++ G+C  G ++ A E  N +  +G  P+ + Y+ + KG    
Sbjct: 211 DLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTA 270

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +     ++I ++  +   P   T +V+I   CQ G  +  ++L E M       N++ Y
Sbjct: 271 GRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTY 330

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++S +C+ G +D AL LL  M+  G KP++ TY+IL++GLC  ++   A  L  +M  
Sbjct: 331 NAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQ 390

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               P+      I+  LC+K +  +A   F  +    C  + V Y+ +I+G  K G + +
Sbjct: 391 TDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQ 450

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           +++L  ++  K  +P I  ++ L     +  K+ +A +++  ++  G+ P AV Y T + 
Sbjct: 451 SLELLNEMGSKGFNPEI-NYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILL 509

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C  G   + + +L  M +    P   TY+++I+GL  +  ++EA +LL  +    V  
Sbjct: 510 GLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIV 569

Query: 482 DQITYN 487
           D +  N
Sbjct: 570 DNLIKN 575



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 232/488 (47%), Gaps = 9/488 (1%)

Query: 96  PSVVSLNAIMSRYCKLGF-AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
           P V   N ++   C+ G  A+ A+    ++   G    A +Y+ L  G C  G ++EA  
Sbjct: 86  PDVALANRLVRDLCRRGRPADAAR----VVEACGSAATAVTYSALADGYCRVGRLDEARR 141

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
             + M    V P A  Y+ L     +  Q+  A  ++  +L +G  PD+VTY +L+   C
Sbjct: 142 VVDGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAAC 198

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           +     + ++L ++M  +G     + Y+V++  MC+ G +D A  LL  + + G  P+ V
Sbjct: 199 KGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTV 258

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
            Y+ +++GL    +     +L  EM S+   P+      ++  LC++ +   A    + +
Sbjct: 259 NYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKM 318

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
              +C  ++V YN ++ G  + G++  A+ L   +      P+I T+N L+ G C   + 
Sbjct: 319 SKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERW 378

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            DA  L+  +      P  +T+ T +   C++G   + + + ++M  K   P  VTY+ V
Sbjct: 379 EDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSV 438

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I+GL K  K++++++LL +M   G  P +I Y+ +     +   L +A Q+++++    +
Sbjct: 439 IEGLAKTGKMEQSLELLNEMGSKGFNP-EINYHLLAECLNEEDKLVEAIQMVHKLQDTGI 497

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
            P +  YN ++ GLC NG    A  +L ++        +  Y+ +I+    EG + +A  
Sbjct: 498 SPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARE 557

Query: 575 FFCQMVEK 582
               +  +
Sbjct: 558 LLSTLSSR 565



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 224/516 (43%), Gaps = 60/516 (11%)

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
           PD    + L +      + + A +V++     GS    VTY+ L  GYC++G ++E    
Sbjct: 86  PDVALANRLVRDLCRRGRPADAARVVEAC---GSAATAVTYSALADGYCRVGRLDEA--- 139

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
           R V+       +  AY+ L+ ++C  G++ +AL LL  M   G  PD+VTY+IL+   CK
Sbjct: 140 RRVVDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACK 199

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
                +A++L + M  +  +P +  +  I+ G+C +  +  AR   +SL    C  + V 
Sbjct: 200 GRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVN 259

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN ++ G    G   +  +L  ++  +   PS  T + +I   C+ G    A RLL+ + 
Sbjct: 260 YNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMS 319

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
            H    + VTY   ++  CE+G++   L LL  M+T    P   TY +++KGLC   + +
Sbjct: 320 KHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWE 379

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           +A  L+  M      PD +T+NTII   C+     +A ++  QM      P S TY+ +I
Sbjct: 380 DAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVI 439

Query: 526 DGLCVNGDLKN----------------------ADCL------------LVSLQEHNISL 551
           +GL   G ++                       A+CL            +  LQ+  IS 
Sbjct: 440 EGLAKTGKMEQSLELLNEMGSKGFNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISP 499

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEIC 611
             V Y TI+   C  G   +A+     MV  G             CM       PD+   
Sbjct: 500 QAVLYNTILLGLCRNGKTDQAIDILSNMVSDG-------------CM-------PDESTY 539

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            +++      G +    EL + +    ++ D  + N
Sbjct: 540 SILIQGLAHEGYMKEARELLSTLSSRDVIVDNLIKN 575



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 212/446 (47%), Gaps = 7/446 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSE 58
           LA  Y R G + +A  V+  M  L    S   YN L++ L     + D   L D++    
Sbjct: 126 LADGYCRVGRLDEARRVVDGMPVLP---SAYAYNPLMHALCVRGQVRDALVLLDNMLYRG 182

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +V T +I+++  C+    + A+  +     +   P+ V+ N IM   C+ G  + A+
Sbjct: 183 CAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYAR 242

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L   +  YG  P+  +YN ++ GL  AG  E+  E   +M      P   T S++    
Sbjct: 243 ELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSL 302

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                   A ++++K+       +IVTY  ++ G C+ G+V+  L L   M + G K N+
Sbjct: 303 CQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNI 362

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y++L+  +C + R ++A  L+ +M      PD++T++ +I  LC++    +A++++ +
Sbjct: 363 FTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQ 422

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  K   PNS  + +++ GL +   + ++    + +  S      + Y+++ +   +   
Sbjct: 423 MPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEM-GSKGFNPEINYHLLAECLNEEDK 481

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           + EA+Q+  +L +  ISP  V +N+++ G C+NGK   A  +L  +   G  P   TY+ 
Sbjct: 482 LVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSI 541

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAI 444
            +     EG ++    LL  + ++ +
Sbjct: 542 LIQGLAHEGYMKEARELLSTLSSRDV 567


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 259/520 (49%), Gaps = 22/520 (4%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           LC   + + A   ++E  G+ F P   + + +++  C     E+A  LF  M + GL  D
Sbjct: 417 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 476

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
            ++Y I++   C AG +E+A ++ N+M   G  P+ +TY+ L   +    ++S A ++ +
Sbjct: 477 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 536

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML----------------SQGFKL 236
            +L +G  P+IVTY+ LI G+C+ G VE+  ++ E M                     + 
Sbjct: 537 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 596

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NV+ Y  LL   CKS R++EA  LL  M   G +P+ + Y  LI GLCK  K+ +A ++ 
Sbjct: 597 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 656

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM         + + +++    + +    A      ++ ++C  +VV+Y  MIDG  K+
Sbjct: 657 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 716

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   EA +L + + EK   P++VT+ ++I GF   GK+     LL+ +   G+ P+ VTY
Sbjct: 717 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 776

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT-YTVVIKGLCKQWKLQEAVQLLEDMY 475
              ++  C+ G +     LL+EM+ +   PTH   Y  VI+G  K++   E++ LL+++ 
Sbjct: 777 RVLIDHCCKNGALDVAHNLLEEMK-QTHWPTHTAGYRKVIEGFNKEF--IESLGLLDEIG 833

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM--WLHNLEPTSATYNILIDGLCVNGD 533
                P    Y  +I +  K + L  A +LL ++  +   L   S+TYN LI+ LC+   
Sbjct: 834 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 893

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           ++ A  L   + +  +     ++ ++IK       + +A+
Sbjct: 894 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 933



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/550 (26%), Positives = 247/550 (44%), Gaps = 25/550 (4%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I    +  RL  A L  +E +         +L       CK+G    A     L+
Sbjct: 196 TYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREA---LTLV 252

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
                 PD   Y  LI GLC A   EEA++F N M      P+ +TYS L  G     Q+
Sbjct: 253 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 312

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
               +V+  ++++G  P    +  L+  YC  G+     KL + M+  G     + Y++L
Sbjct: 313 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 372

Query: 245 LSSMCKSGR------IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + S+C          +D A     EM A G+  + +  S   R LC   K  KA  +  E
Sbjct: 373 IGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 432

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  +   P++  +  +L  LC    +  A + F+ +     + DV  Y IM+D + K G 
Sbjct: 433 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 492

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I +A + + ++ E   +P++VT+ +LI+ + K  KV+ A  L +T+   G  P+ VTY+ 
Sbjct: 493 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 552

Query: 419 FMNAYCEEGNIQRLLALLQEM----------------ETKAIGPTHVTYTVVIKGLCKQW 462
            ++ +C+ G +++   + + M                +  +  P  VTY  ++ G CK  
Sbjct: 553 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 612

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           +++EA +LL+ M + G  P+QI Y+ +I   CK   L +A ++  +M  H    T  TY+
Sbjct: 613 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 672

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            LID          A  +L  + E++ +   V YT +I   C  G   +A      M EK
Sbjct: 673 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 732

Query: 583 GFEISIRDYT 592
           G + ++  YT
Sbjct: 733 GCQPNVVTYT 742



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 170/660 (25%), Positives = 278/660 (42%), Gaps = 98/660 (14%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           D  + ++ +    NV T S ++ G   + +L      L     +   PS    N+++  Y
Sbjct: 282 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 341

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG-------------------------- 142
           C  G    A  L   M+K G  P    YNILI                            
Sbjct: 342 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAA 401

Query: 143 ---------------LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
                          LC AG  E+A     +M   G  PD  TYS +       S++  A
Sbjct: 402 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 461

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           + + +++   G   D+ TYT+++  +C+ G +E+  K    M   G   NV+ Y+ L+ +
Sbjct: 462 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 521

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC-SKRIS- 305
             K+ ++  A  L   M + G  P++VTYS LI G CK  +V KA Q++  MC SK +  
Sbjct: 522 YLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 581

Query: 306 --------------PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
                         PN   +GA+L G C+   + EAR   D++ M  C  + ++Y+ +ID
Sbjct: 582 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 641

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G  K+G + EA ++  ++ E     ++ T++SLI  + K  +   A ++L  +  +   P
Sbjct: 642 GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP 701

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + V YT  ++  C+ G       L+Q ME K   P  VTYT +I G     K++  ++LL
Sbjct: 702 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 761

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM----W----------------- 510
           E M   GV P+ +TY  +I   CK   L  A  LL +M    W                 
Sbjct: 762 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 821

Query: 511 ------------LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA--Y 556
                         +  P  + Y +LID L     L+ A  LL  +   + +L   +  Y
Sbjct: 822 FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTY 881

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
            ++I++ C    V  A   F +M +KG    ++      FC ++  G   + +I E +L+
Sbjct: 882 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS-----FCSLI-KGLFRNSKISEALLL 935



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 211/454 (46%), Gaps = 27/454 (5%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN-LRHTDIMW--DLYDDIKVSETPRN 62
           + + G++  A     +M+E+    ++ TY +L++  L+   + +  +L++ +       N
Sbjct: 487 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 546

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAG-----------KEFG-----PSVVSLNAIMS 106
           + T S +IDG C+  +++ A    +   G           K++      P+VV+  A++ 
Sbjct: 547 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 606

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
            +CK    E A+ L   M   G  P+   Y+ LI GLC  G ++EA E   +M  HG   
Sbjct: 607 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 666

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
              TYS L   +  + +   A KV+ K+L     P++V YT +I G C++G  +E  KL 
Sbjct: 667 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 726

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           ++M  +G + NV+ Y+ ++      G+I+  L LL  M + G+ P+ VTY +LI   CK 
Sbjct: 727 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 786

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
             +  A  L  EM       ++  +  ++ G   KE I E+    D +   +    + +Y
Sbjct: 787 GALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF-NKEFI-ESLGLLDEIGQDDTAPFLSVY 844

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV----TFNSLIYGFCKNGKVADARRLLD 402
            ++ID  +K   +  A++L  ++     S ++V    T+NSLI   C   KV  A +L  
Sbjct: 845 RLLIDNLIKAQRLEMALRLLEEV--ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 902

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            +   G+ P   ++ + +        I   L LL
Sbjct: 903 EMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 936



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 131/578 (22%), Positives = 230/578 (39%), Gaps = 75/578 (12%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N+L+   C  GS   ALE    +      P   TY+ L + F    ++  A  + +++ +
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 222

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
                D  T        C++G   E L L E   ++ F  + + Y+ L+S +C++   +E
Sbjct: 223 ANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEE 279

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+  L  M A    P++VTYS L+ G   + ++ +  ++ N M  +   P+     +++ 
Sbjct: 280 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 339

Query: 317 GLCE-----------KEMITEARM----YFDSLIMSNC---------------------- 339
             C            K+M+    M     ++ LI S C                      
Sbjct: 340 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEML 399

Query: 340 IQDVVLYNIMIDGYVK----LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              VVL  I +  + +     G   +A  + R++I +   P   T++ ++   C   K+ 
Sbjct: 400 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 459

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L + +K  GL     TYT  ++++C+ G I++      EM      P  VTYT +I
Sbjct: 460 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 519

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM------ 509
               K  K+  A +L E M   G  P+ +TY+ +I   CK   + KA Q+  +M      
Sbjct: 520 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 579

Query: 510 ---------WLHNLE-PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
                    +  N E P   TY  L+DG C +  ++ A  LL ++        ++ Y  +
Sbjct: 580 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 639

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISI---------------RDYTKSFFCMMLSNGF 604
           I   C  G + +A     +M E GF  ++               +D        ML N  
Sbjct: 640 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 699

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            P+  I   M+    + G     ++L  +M + G  P+
Sbjct: 700 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 737



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 35/299 (11%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +IDGLC+  +L +A     E +   F  ++ + ++++ RY K+   ++A  +   ML+  
Sbjct: 639 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 698

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P+   Y  +I GLC  G  +EA +    M   G +P+ +TY+ +  GF ++ +I    
Sbjct: 699 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 758

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM--------------LSQGF 234
           ++++++  KG  P+ VTY VLI   C+ G ++    L E M              + +GF
Sbjct: 759 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 818

Query: 235 KLNVI-------------------AYSVLLSSMCKSGRIDEALGLLYEME--AVGLKPDL 273
               I                    Y +L+ ++ K+ R++ AL LL E+   +  L    
Sbjct: 819 NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYS 878

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
            TY+ LI  LC  +KV  A QL++EM  K + P   +  +++ GL     I+EA +  D
Sbjct: 879 STYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 937



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 126/305 (41%), Gaps = 29/305 (9%)

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN +I  ++K   +  A  ++R++    +     T     Y  CK GK  +A  L++T  
Sbjct: 197 YNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET-- 254

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
                P  V YT  ++  CE    +  +  L  M   +  P  VTY+ ++ G   + +L 
Sbjct: 255 -ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLG 313

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
              ++L  M + G  P    +N+++ ++C   D   A++LL +M      P    YNILI
Sbjct: 314 RCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI 373

Query: 526 DGLCVNGDLKNADCLLVSLQEHN------ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
             +C + D  N D L ++ + ++      + L K+  ++  +  C+ G   KA +     
Sbjct: 374 GSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSV---- 429

Query: 580 VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                   IR+        M+  GF PD      +L        +   F L   M + GL
Sbjct: 430 --------IRE--------MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 473

Query: 640 LPDKF 644
           + D +
Sbjct: 474 VADVY 478



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 105/281 (37%), Gaps = 26/281 (9%)

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           RQ+  K  +P    +N+L+    ++         L  I+    E         +  +C  
Sbjct: 116 RQIGYKHTAP---VYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRN 172

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G+    L  L  ++     P+  TY  +I+   K  +L  A  +  +M +  +  D  T 
Sbjct: 173 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTL 232

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
                S CK    R+A  L+      N  P +  Y  LI GLC     + A   L  ++ 
Sbjct: 233 RCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA 289

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPP 606
            +     V Y+T++   C  G ++K     C+ V                 MM+  G  P
Sbjct: 290 TSCLPNVVTYSTLL---C--GCLNKKQLGRCKRV---------------LNMMMMEGCYP 329

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             +I   ++ A+   GD    ++L   M+K G +P   + N
Sbjct: 330 SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN 370


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 183/713 (25%), Positives = 311/713 (43%), Gaps = 96/713 (13%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
           V  R G + DA  ++  M++      + TY  L+  L      D   +LY  ++ S    
Sbjct: 271 VLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKP 330

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T   ++        L+    F  E     + P VV+   ++   CK G  + A  + 
Sbjct: 331 DLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDML 390

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M   G+ P+  +YN LI GL     ++EALE  N+M   GV P A +Y +    +  L
Sbjct: 391 DVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKL 450

Query: 182 SQISGAWKVIQKLLIKGS-----------------------------------DPDIVTY 206
                A    +K+  +G                                     PD VTY
Sbjct: 451 GDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTY 510

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            +++  Y + G +++  KL   MLS+G + ++I  + L+ ++ K+GR+DEA  +   ++ 
Sbjct: 511 NMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKD 570

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           + L P +VTY+ILI GL K+ K+ KA+ L+  M      PN+    A+L  LC+ + +  
Sbjct: 571 LKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDL 630

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
           A   F  + + NC  DV+ YN +I G +K G  G A   Y Q+ +K +SP  VT  +L+ 
Sbjct: 631 ALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLP 689

Query: 387 GFCKNGKVADARRL-LDTIKLHGLEPSAVTYTTFM---------------------NAYC 424
           G  K+G+V DA ++ ++ +   GL+ S   +   M                     N+ C
Sbjct: 690 GVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSIC 749

Query: 425 EEGN-IQRLLALLQEME------------TKAIG--PTHVTYTVVIKGLCKQWKLQEAVQ 469
           ++ N I  L+ +L + +            TK++G  PT  +Y  ++ GL      + A++
Sbjct: 750 QDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALK 809

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           L  +M   G  P+  TYN ++ +  K K + + F+L N+M     +P   T+NI+I  L 
Sbjct: 810 LFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALV 869

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            +  +  A  L   +   + S T   Y  +I      G   +AM  F +M          
Sbjct: 870 KSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEM---------P 920

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           DY     C        P+  I  +++  F + G++    +L   MIK G+ PD
Sbjct: 921 DYQ----C-------KPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPD 962



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 254/551 (46%), Gaps = 3/551 (0%)

Query: 32  QTYNSLLYNLR---HTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
           +T N +L  LR     + M  ++D ++     RN  T   +   L  +  ++ A   L +
Sbjct: 123 ETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGK 182

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
                F  +  S N ++    + GF + A  ++  M+  GL P   +Y+ L+  L     
Sbjct: 183 MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRD 242

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
               ++   +M   G+ P+  TY+I  +      +I  A+ +++ +  +G  PD+VTYTV
Sbjct: 243 TGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTV 302

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           LI   C  G +++  +L   M +   K +++ Y  L+S     G ++       EMEA G
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
             PD+VTY+IL+  LCK  KV +A  + + M  + I PN   +  ++ GL     + EA 
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL 422

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             F+++           Y + ID Y KLG+  +A+  + ++ ++ I PSI   N+ +Y  
Sbjct: 423 ELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSL 482

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
            + G++ +A+ + + I   GL P +VTY   M  Y + G I +   LL EM ++   P  
Sbjct: 483 AEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDI 542

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           +    +I  L K  ++ EA Q+   +  + + P  +TYN +I    K   L KA  L   
Sbjct: 543 IVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGS 602

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M      P + T+N L+D LC N  +  A  +   +   N S   + Y TII     EG 
Sbjct: 603 MKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGR 662

Query: 569 VHKAMTFFCQM 579
              A  F+ QM
Sbjct: 663 AGYAFWFYHQM 673



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 149/573 (26%), Positives = 267/573 (46%), Gaps = 5/573 (0%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNV 63
           S  G +  A F + KM++    ++  +YN L+Y L       +   +Y  +       ++
Sbjct: 168 SIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSM 227

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T S ++  L ++      +  L+E       P++ +    +    + G  + A G+   
Sbjct: 228 KTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKT 287

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G  PD  +Y +LI  LC AG +++A E    M     +PD +TY  L   F     
Sbjct: 288 MEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGD 347

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +    +   ++   G  PD+VTYT+L+   C+ G V++   + +VM  +G   N+  Y+ 
Sbjct: 348 LETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNT 407

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+S +    R+DEAL L   ME++G+ P   +Y + I    K     KA+  + +M  + 
Sbjct: 408 LISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRG 467

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           I P+  A  A L  L E   I EA+  F+ +       D V YN+M+  Y K G I +A 
Sbjct: 468 IMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKAT 527

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L  +++ +   P I+  NSLI    K G+V +A ++   +K   L P+ VTY   +   
Sbjct: 528 KLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGL 587

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            +EG + + L L   M+     P  VT+  ++  LCK   +  A+++   M ++  +PD 
Sbjct: 588 GKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDV 647

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TYNTII    K      AF   +QM    L P   T   L+ G+  +G +++A  +++ 
Sbjct: 648 LTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVME 706

Query: 544 -LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
            + +  +  +   +  +++    E ++ +A++F
Sbjct: 707 FVHQSGLQTSNQVWGELMECILIEAEIEEAISF 739



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 161/655 (24%), Positives = 280/655 (42%), Gaps = 53/655 (8%)

Query: 45   DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
            D  +D+ D ++V     N++T + +I GL    RL +A+            P+  S    
Sbjct: 384  DQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLF 443

Query: 105  MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
            +  Y KLG  E A   F  M K G+ P   + N  ++ L   G + EA +  ND+   G+
Sbjct: 444  IDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGL 503

Query: 165  EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
             PD++TY+++ K +    QI  A K++ ++L +G +PDI+    LI    + G V+E  +
Sbjct: 504  SPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQ 563

Query: 225  LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
            +   +        V+ Y++L++ + K G++ +AL L   M+  G  P+ VT++ L+  LC
Sbjct: 564  MFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLC 623

Query: 285  KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
            K D V  A++++  M     SP+   +  I+ GL ++     A  ++  +        V 
Sbjct: 624  KNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVT 683

Query: 345  LYNIMIDGYVKLGNIGEAVQLYRQ---------------------LIEKRISPSI----- 378
            LY ++  G VK G + +A+++  +                     LIE  I  +I     
Sbjct: 684  LYTLL-PGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEG 742

Query: 379  VTFNS----------LIYGFCKNGKVADARRLLDTI-KLHGLEPSAVTYTTFMNAYCEEG 427
            +  NS          LI   CK  K  DA++L D   K  G  P+  +Y   M+      
Sbjct: 743  LVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCN 802

Query: 428  NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
              +  L L  EM+     P   TY +++    K  ++ E  +L  +M   G  P+ IT+N
Sbjct: 803  ITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHN 862

Query: 488  TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
             II +  K   + KA  L  ++   +  PT  TY  LI GL   G  + A  +   + ++
Sbjct: 863  IIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDY 922

Query: 548  NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS------ 601
                    Y  +I      G+V+ A   F +M+++G    ++ YT    C+ ++      
Sbjct: 923  QCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDA 982

Query: 602  ---------NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                      G  PD     +M+    +   L     L + M   G+ P+ +  N
Sbjct: 983  VHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYN 1037



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/554 (25%), Positives = 257/554 (46%), Gaps = 41/554 (7%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRNVY 64
            + G V +A  +  ++K+L L  ++ TYN L+  L     +    DL+  +K S  P N  
Sbjct: 554  KAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTV 613

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T + ++D LC+   +  A+            P V++ N I+    K G A  A   +  M
Sbjct: 614  TFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM 673

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND-MGRHGVEPDAITYSILAKGFHLLSQ 183
             K+ L PD  +   L+ G+   G +E+A++   + + + G++     +  L +   + ++
Sbjct: 674  KKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAE 732

Query: 184  ISGAWKVIQKL--------------LIK----------------------GSDPDIVTYT 207
            I  A    + L              LI+                      G+ P   +Y 
Sbjct: 733  IEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYN 792

Query: 208  VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
             L+ G       E  LKL   M + G   N+  Y++LL +  KS RIDE   L  EM   
Sbjct: 793  CLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCR 852

Query: 268  GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
            G KP+++T++I+I  L K + ++KA+ LY E+ S   SP    +G ++ GL +     EA
Sbjct: 853  GCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEA 912

Query: 328  RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
               F+ +    C  +  +YNI+I+G+ K GN+  A  L++++I++ I P + ++  L+  
Sbjct: 913  MKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVEC 972

Query: 388  FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
                G+V DA    + +KL GL+P  V+Y   +N   +   ++  L+L  EM+ + I P 
Sbjct: 973  LFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPE 1032

Query: 448  HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
              TY  +I        + +A ++ E++  +G+ P+  TYN +IR   K  +  +AF +  
Sbjct: 1033 LYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFK 1092

Query: 508  QMWLHNLEPTSATY 521
            +M +    P + T+
Sbjct: 1093 KMMIVGCSPNAGTF 1106



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 140/586 (23%), Positives = 268/586 (45%), Gaps = 8/586 (1%)

Query: 1    MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVS 57
            M+   YS+ G +  A  ++ +M     +  I   NSL   LY     D  W ++  +K  
Sbjct: 512  MMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDL 571

Query: 58   ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            +    V T +I+I GL ++ +L  A+            P+ V+ NA++   CK    ++A
Sbjct: 572  KLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLA 631

Query: 118  KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              +FC M      PD  +YN +I+GL   G    A  F + M +  + PD +T   L  G
Sbjct: 632  LKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPG 690

Query: 178  FHLLSQISGAWKVIQKLLIKGS--DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                 ++  A K++ + + +      + V   ++ C   +   +EE +   E ++     
Sbjct: 691  VVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIE-AEIEEAISFAEGLVCNSIC 749

Query: 236  LNVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             +      L+  +CK  +  +A  L  +  +++G  P   +Y+ L+ GL   +    A++
Sbjct: 750  QDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALK 809

Query: 295  LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
            L+ EM +    PN F +  +L    + + I E    ++ ++   C  +++ +NI+I   V
Sbjct: 810  LFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALV 869

Query: 355  KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
            K  +I +A+ LY ++I    SP+  T+  LI G  K G+  +A ++ + +  +  +P+  
Sbjct: 870  KSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCA 929

Query: 415  TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
             Y   +N + + GN+     L + M  + I P   +YT++++ L    ++ +AV   E++
Sbjct: 930  IYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEEL 989

Query: 475  YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
             + G+ PD ++YN +I    K + L +A  L ++M    + P   TYN LI      G +
Sbjct: 990  KLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMV 1049

Query: 535  KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
              A  +   LQ   +      Y  +I+ H   G+  +A + F +M+
Sbjct: 1050 DQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMM 1095



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 234/477 (49%), Gaps = 10/477 (2%)

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G  E    +F LM K  ++ +  +Y  +   L I G + +A      M + G   +A +Y
Sbjct: 136 GRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSY 195

Query: 172 S-----ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
           +     +L  GF        A KV ++++ +G  P + TY+ L+    +  +    + L 
Sbjct: 196 NGLIYFLLQPGF-----CKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLL 250

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           E M + G + N+  Y++ +  + ++GRID+A G+L  ME  G  PD+VTY++LI  LC  
Sbjct: 251 EEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAA 310

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            K+ KA +LY +M +    P+   +  ++        +   + ++  +       DVV Y
Sbjct: 311 GKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTY 370

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
            I+++   K G + +A  +   +  + I P++ T+N+LI G     ++ +A  L + ++ 
Sbjct: 371 TILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMES 430

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+ P+A +Y  F++ Y + G+ ++ L   ++M+ + I P+       +  L +  +++E
Sbjct: 431 LGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIRE 490

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A  +  D++  G++PD +TYN +++ + K   + KA +LL +M     EP     N LID
Sbjct: 491 AKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLID 550

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            L   G +  A  +   L++  ++ T V Y  +I     EG + KA+  F  M E G
Sbjct: 551 TLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESG 607



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 143/627 (22%), Positives = 258/627 (41%), Gaps = 41/627 (6%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW---DLYDDIKVSETPRN 62
            Y + G    A+    KMK+  +  SI   N+ LY+L     +    D+++DI       +
Sbjct: 447  YGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPD 506

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
              T ++++    +  ++  A   L E   +   P ++ +N+++    K G  + A  +F 
Sbjct: 507  SVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFG 566

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             +    L P   +YNILI GL   G + +AL+    M   G  P+ +T++ L        
Sbjct: 567  RLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKND 626

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
             +  A K+  ++ I    PD++TY  +I G  + G           M       +V  Y+
Sbjct: 627  AVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYT 686

Query: 243  VLLSSMCKSGRIDEALGLLYEM---------------------------EAVGLKPDLVT 275
             LL  + K GR+++A+ ++ E                            EA+     LV 
Sbjct: 687  -LLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVC 745

Query: 276  YSI---------LIRGLCKQDKVHKAIQLYNEMC-SKRISPNSFAHGAILLGLCEKEMIT 325
             SI         LIR LCKQ K   A +L+++   S    P   ++  ++ GL    +  
Sbjct: 746  NSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITE 805

Query: 326  EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
             A   F  +  + C  ++  YN+++D + K   I E  +LY +++ +   P+I+T N +I
Sbjct: 806  AALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIII 865

Query: 386  YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
                K+  +  A  L   I      P+  TY   +    + G  +  + + +EM      
Sbjct: 866  SALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCK 925

Query: 446  PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
            P    Y ++I G  K   +  A  L + M   G+ PD  +Y  ++        +  A   
Sbjct: 926  PNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHY 985

Query: 506  LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
              ++ L  L+P + +YN++I+GL  +  L+ A  L   ++   IS     Y  +I     
Sbjct: 986  FEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGN 1045

Query: 566  EGDVHKAMTFFCQMVEKGFEISIRDYT 592
             G V +A   F ++   G E ++  Y 
Sbjct: 1046 AGMVDQAGKMFEELQFMGLEPNVFTYN 1072



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 162/360 (45%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   GF LN  +Y+ L+  + + G   EAL +   M + GLKP + TYS L+  L ++  
Sbjct: 183 MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRD 242

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
               + L  EM +  + PN + +   +  L     I +A     ++    C  DVV Y +
Sbjct: 243 TGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTV 302

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +ID     G + +A +LY ++      P +VT+ +L+  F   G +   +R    ++  G
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
             P  VTYT  + A C+ G + +   +L  M  + I P   TY  +I GL    +L EA+
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL 422

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +L  +M  +GV P   +Y   I  + K  D  KA     +M    + P+ A  N  +  L
Sbjct: 423 ELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSL 482

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
              G ++ A  +   +    +S   V Y  ++K +   G + KA     +M+ +G E  I
Sbjct: 483 AEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDI 542



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 171/381 (44%), Gaps = 36/381 (9%)

Query: 73   LCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
            LC+Q +  DA  LF + T      P+  S N +M         E A  LF  M   G  P
Sbjct: 762  LCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCP 821

Query: 132  DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
            + F+YN+L+     +  ++E  E  N+M   G +P+ IT++I+       + I+ A  + 
Sbjct: 822  NIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLY 881

Query: 192  QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             +++     P   TY  LI G  + G  EE +K+ E M     K N   Y++L++   K+
Sbjct: 882  YEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKA 941

Query: 252  GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            G ++ A  L   M   G++PDL +Y+IL+  L    +V  A+  + E+    + P++   
Sbjct: 942  GNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDT--- 998

Query: 312  GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
                                            V YN+MI+G  K   + EA+ L+ ++  
Sbjct: 999  --------------------------------VSYNLMINGLGKSRRLEEALSLFSEMKN 1026

Query: 372  KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
            + ISP + T+N+LI  F   G V  A ++ + ++  GLEP+  TY   +  + + GN  R
Sbjct: 1027 RGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDR 1086

Query: 432  LLALLQEMETKAIGPTHVTYT 452
              ++ ++M      P   T+ 
Sbjct: 1087 AFSVFKKMMIVGCSPNAGTFA 1107



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 181/446 (40%), Gaps = 50/446 (11%)

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G VE+   + ++M  Q    N   Y  +  ++   G I +A   L +M   G   +  +Y
Sbjct: 136 GRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSY 195

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + LI  L +     +A+++Y  M S+ + P+   + A+++ L  +               
Sbjct: 196 NGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRR-------------- 241

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                                + G  + L  ++    + P+I T+   I    + G++ D
Sbjct: 242 ---------------------DTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDD 280

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  +L T++  G  P  VTYT  ++A C  G + +   L  +M   +  P  VTY  ++ 
Sbjct: 281 AYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMS 340

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
                  L+   +   +M   G  PD +TY  ++ + CK   + +AF +L+ M +  + P
Sbjct: 341 KFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVP 400

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              TYN LI GL     L  A  L  +++   ++ T  +Y   I  +   GD  KA+  F
Sbjct: 401 NLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTF 460

Query: 577 CQMVEKGFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAFHQG 621
            +M ++G   SI     S + +               + + G  PD     +M+  + + 
Sbjct: 461 EKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKA 520

Query: 622 GDLGSVFELAAVMIKSGLLPDKFLIN 647
           G +    +L   M+  G  PD  ++N
Sbjct: 521 GQIDKATKLLTEMLSEGCEPDIIVVN 546


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 259/520 (49%), Gaps = 22/520 (4%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           LC   + + A   ++E  G+ F P   + + +++  C     E+A  LF  M + GL  D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
            ++Y I++   C AG +E+A ++ N+M   G  P+ +TY+ L   +    ++S A ++ +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML----------------SQGFKL 236
            +L +G  P+IVTY+ LI G+C+ G VE+  ++ E M                     + 
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NV+ Y  LL   CKS R++EA  LL  M   G +P+ + Y  LI GLCK  K+ +A ++ 
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM         + + +++    + +    A      ++ ++C  +VV+Y  MIDG  K+
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   EA +L + + EK   P++VT+ ++I GF   GK+     LL+ +   G+ P+ VTY
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT-YTVVIKGLCKQWKLQEAVQLLEDMY 475
              ++  C+ G +     LL+EM+ +   PTH   Y  VI+G  K++   E++ LL+++ 
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMK-QTHWPTHTAGYRKVIEGFNKEF--IESLGLLDEIG 874

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM--WLHNLEPTSATYNILIDGLCVNGD 533
                P    Y  +I +  K + L  A +LL ++  +   L   S+TYN LI+ LC+   
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           ++ A  L   + +  +     ++ ++IK       + +A+
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/550 (26%), Positives = 247/550 (44%), Gaps = 25/550 (4%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I    +  RL  A L  +E +         +L       CK+G    A     L+
Sbjct: 237 TYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREA---LTLV 293

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
                 PD   Y  LI GLC A   EEA++F N M      P+ +TYS L  G     Q+
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
               +V+  ++++G  P    +  L+  YC  G+     KL + M+  G     + Y++L
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413

Query: 245 LSSMCKSGR------IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + S+C          +D A     EM A G+  + +  S   R LC   K  KA  +  E
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  +   P++  +  +L  LC    +  A + F+ +     + DV  Y IM+D + K G 
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I +A + + ++ E   +P++VT+ +LI+ + K  KV+ A  L +T+   G  P+ VTY+ 
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593

Query: 419 FMNAYCEEGNIQRLLALLQEM----------------ETKAIGPTHVTYTVVIKGLCKQW 462
            ++ +C+ G +++   + + M                +  +  P  VTY  ++ G CK  
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           +++EA +LL+ M + G  P+QI Y+ +I   CK   L +A ++  +M  H    T  TY+
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            LID          A  +L  + E++ +   V YT +I   C  G   +A      M EK
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773

Query: 583 GFEISIRDYT 592
           G + ++  YT
Sbjct: 774 GCQPNVVTYT 783



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 170/660 (25%), Positives = 278/660 (42%), Gaps = 98/660 (14%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           D  + ++ +    NV T S ++ G   + +L      L     +   PS    N+++  Y
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG-------------------------- 142
           C  G    A  L   M+K G  P    YNILI                            
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442

Query: 143 ---------------LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
                          LC AG  E+A     +M   G  PD  TYS +       S++  A
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           + + +++   G   D+ TYT+++  +C+ G +E+  K    M   G   NV+ Y+ L+ +
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC-SKRIS- 305
             K+ ++  A  L   M + G  P++VTYS LI G CK  +V KA Q++  MC SK +  
Sbjct: 563 YLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622

Query: 306 --------------PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
                         PN   +GA+L G C+   + EAR   D++ M  C  + ++Y+ +ID
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G  K+G + EA ++  ++ E     ++ T++SLI  + K  +   A ++L  +  +   P
Sbjct: 683 GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP 742

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + V YT  ++  C+ G       L+Q ME K   P  VTYT +I G     K++  ++LL
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM----W----------------- 510
           E M   GV P+ +TY  +I   CK   L  A  LL +M    W                 
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 862

Query: 511 ------------LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA--Y 556
                         +  P  + Y +LID L     L+ A  LL  +   + +L   +  Y
Sbjct: 863 FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTY 922

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
            ++I++ C    V  A   F +M +KG    ++      FC ++  G   + +I E +L+
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS-----FCSLI-KGLFRNSKISEALLL 976



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 239/538 (44%), Gaps = 26/538 (4%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYT 65
            G    A  VI +M          TY+ +L    N    ++ + L++++K      +VYT
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            +I++D  C+   ++ A  +  E       P+VV+  A++  Y K      A  LF  ML
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G  P+  +Y+ LI G C AG +E+A +    M      PD   Y              
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY-------------- 626

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
                 ++       P++VTY  L+ G+C+   VEE  KL + M  +G + N I Y  L+
Sbjct: 627 -----FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +CK G++DEA  +  EM   G    L TYS LI    K  +   A ++ ++M     +
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN   +  ++ GLC+     EA      +    C  +VV Y  MIDG+  +G I   ++L
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++  K ++P+ VT+  LI   CKNG +  A  LL+ +K          Y   +  + +
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK 861

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT--PDQ 483
           E      L LL E+      P    Y ++I  L K  +L+ A++LLE++     T     
Sbjct: 862 E--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYS 919

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
            TYN++I S C    +  AFQL ++M    + P   ++  LI GL  N  +  A  LL
Sbjct: 920 STYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 211/454 (46%), Gaps = 27/454 (5%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN-LRHTDIMW--DLYDDIKVSETPRN 62
           + + G++  A     +M+E+    ++ TY +L++  L+   + +  +L++ +       N
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAG-----------KEFG-----PSVVSLNAIMS 106
           + T S +IDG C+  +++ A    +   G           K++      P+VV+  A++ 
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 647

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
            +CK    E A+ L   M   G  P+   Y+ LI GLC  G ++EA E   +M  HG   
Sbjct: 648 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
              TYS L   +  + +   A KV+ K+L     P++V YT +I G C++G  +E  KL 
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           ++M  +G + NV+ Y+ ++      G+I+  L LL  M + G+ P+ VTY +LI   CK 
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
             +  A  L  EM       ++  +  ++ G   KE I E+    D +   +    + +Y
Sbjct: 828 GALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF-NKEFI-ESLGLLDEIGQDDTAPFLSVY 885

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV----TFNSLIYGFCKNGKVADARRLLD 402
            ++ID  +K   +  A++L  ++     S ++V    T+NSLI   C   KV  A +L  
Sbjct: 886 RLLIDNLIKAQRLEMALRLLEEV--ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 943

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            +   G+ P   ++ + +        I   L LL
Sbjct: 944 EMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 131/578 (22%), Positives = 230/578 (39%), Gaps = 75/578 (12%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N+L+   C  GS   ALE    +      P   TY+ L + F    ++  A  + +++ +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
                D  T        C++G   E L L E   ++ F  + + Y+ L+S +C++   +E
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEE 320

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+  L  M A    P++VTYS L+ G   + ++ +  ++ N M  +   P+     +++ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 317 GLCE-----------KEMITEARM----YFDSLIMSNC---------------------- 339
             C            K+M+    M     ++ LI S C                      
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440

Query: 340 IQDVVLYNIMIDGYVK----LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              VVL  I +  + +     G   +A  + R++I +   P   T++ ++   C   K+ 
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L + +K  GL     TYT  ++++C+ G I++      EM      P  VTYT +I
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM------ 509
               K  K+  A +L E M   G  P+ +TY+ +I   CK   + KA Q+  +M      
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620

Query: 510 ---------WLHNLE-PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
                    +  N E P   TY  L+DG C +  ++ A  LL ++        ++ Y  +
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISI---------------RDYTKSFFCMMLSNGF 604
           I   C  G + +A     +M E GF  ++               +D        ML N  
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            P+  I   M+    + G     ++L  +M + G  P+
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/356 (21%), Positives = 134/356 (37%), Gaps = 59/356 (16%)

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           +YN ++D  V+  +     +  +Q+ +          N L+   C+NG  + A   L  +
Sbjct: 167 VYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRL 226

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM------------------------- 439
           K     PS  TY   + A+ +   +     + +EM                         
Sbjct: 227 KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKW 286

Query: 440 -------ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
                  ET+   P  V YT +I GLC+    +EA+  L  M      P+ +TY+T++  
Sbjct: 287 REALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL-- 344

Query: 493 FCKC---KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
            C C   K L +  ++LN M +    P+   +N L+   C +GD   A  LL  + +   
Sbjct: 345 -CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 403

Query: 550 SLTKVAYTTIIKAHCAEGD------VHKAMTFFCQMVEKGF---EISIRDYTK------- 593
               V Y  +I + C + D      +  A   + +M+  G    +I++  +T+       
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463

Query: 594 -----SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                S    M+  GF PD      +L        +   F L   M + GL+ D +
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY 519



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 105/281 (37%), Gaps = 26/281 (9%)

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           RQ+  K  +P    +N+L+    ++         L  I+    E         +  +C  
Sbjct: 157 RQIGYKHTAP---VYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRN 213

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G+    L  L  ++     P+  TY  +I+   K  +L  A  +  +M +  +  D  T 
Sbjct: 214 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTL 273

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
                S CK    R+A  L+      N  P +  Y  LI GLC     + A   L  ++ 
Sbjct: 274 RCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA 330

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPP 606
            +     V Y+T++   C  G ++K     C+ V                 MM+  G  P
Sbjct: 331 TSCLPNVVTYSTLL---C--GCLNKKQLGRCKRV---------------LNMMMMEGCYP 370

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             +I   ++ A+   GD    ++L   M+K G +P   + N
Sbjct: 371 SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN 411


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 259/520 (49%), Gaps = 22/520 (4%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           LC   + + A   ++E  G+ F P   + + +++  C     E+A  LF  M + GL  D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
            ++Y I++   C AG +E+A ++ N+M   G  P+ +TY+ L   +    ++S A ++ +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML----------------SQGFKL 236
            +L +G  P+IVTY+ LI G+C+ G VE+  ++ E M                     + 
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NV+ Y  LL   CKS R++EA  LL  M   G +P+ + Y  LI GLCK  K+ +A ++ 
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM         + + +++    + +    A      ++ ++C  +VV+Y  MIDG  K+
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G   EA +L + + EK   P++VT+ ++I GF   GK+     LL+ +   G+ P+ VTY
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT-YTVVIKGLCKQWKLQEAVQLLEDMY 475
              ++  C+ G +     LL+EM+ +   PTH   Y  VI+G  K++   E++ LL+++ 
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMK-QTHWPTHTAGYRKVIEGFNKEF--IESLGLLDEIG 874

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM--WLHNLEPTSATYNILIDGLCVNGD 533
                P    Y  +I +  K + L  A +LL ++  +   L   S+TYN LI+ LC+   
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           ++ A  L   + +  +     ++ ++IK       + +A+
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/550 (26%), Positives = 247/550 (44%), Gaps = 25/550 (4%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I    +  RL  A L  +E +         +L       CK+G    A     L+
Sbjct: 237 TYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREA---LTLV 293

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
                 PD   Y  LI GLC A   EEA++F N M      P+ +TYS L  G     Q+
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
               +V+  ++++G  P    +  L+  YC  G+     KL + M+  G     + Y++L
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413

Query: 245 LSSMCKSGR------IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + S+C          +D A     EM A G+  + +  S   R LC   K  KA  +  E
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  +   P++  +  +L  LC    +  A + F+ +     + DV  Y IM+D + K G 
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I +A + + ++ E   +P++VT+ +LI+ + K  KV+ A  L +T+   G  P+ VTY+ 
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593

Query: 419 FMNAYCEEGNIQRLLALLQEM----------------ETKAIGPTHVTYTVVIKGLCKQW 462
            ++ +C+ G +++   + + M                +  +  P  VTY  ++ G CK  
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           +++EA +LL+ M + G  P+QI Y+ +I   CK   L +A ++  +M  H    T  TY+
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            LID          A  +L  + E++ +   V YT +I   C  G   +A      M EK
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773

Query: 583 GFEISIRDYT 592
           G + ++  YT
Sbjct: 774 GCQPNVVTYT 783



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 170/660 (25%), Positives = 278/660 (42%), Gaps = 98/660 (14%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           D  + ++ +    NV T S ++ G   + +L      L     +   PS    N+++  Y
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG-------------------------- 142
           C  G    A  L   M+K G  P    YNILI                            
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442

Query: 143 ---------------LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
                          LC AG  E+A     +M   G  PD  TYS +       S++  A
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           + + +++   G   D+ TYT+++  +C+ G +E+  K    M   G   NV+ Y+ L+ +
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC-SKRIS- 305
             K+ ++  A  L   M + G  P++VTYS LI G CK  +V KA Q++  MC SK +  
Sbjct: 563 YLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622

Query: 306 --------------PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
                         PN   +GA+L G C+   + EAR   D++ M  C  + ++Y+ +ID
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G  K+G + EA ++  ++ E     ++ T++SLI  + K  +   A ++L  +  +   P
Sbjct: 683 GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP 742

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + V YT  ++  C+ G       L+Q ME K   P  VTYT +I G     K++  ++LL
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM----W----------------- 510
           E M   GV P+ +TY  +I   CK   L  A  LL +M    W                 
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 862

Query: 511 ------------LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA--Y 556
                         +  P  + Y +LID L     L+ A  LL  +   + +L   +  Y
Sbjct: 863 FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTY 922

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLI 616
            ++I++ C    V  A   F +M +KG    ++      FC ++  G   + +I E +L+
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS-----FCSLI-KGLFRNSKISEALLL 976



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 239/538 (44%), Gaps = 26/538 (4%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYT 65
            G    A  VI +M          TY+ +L    N    ++ + L++++K      +VYT
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            +I++D  C+   ++ A  +  E       P+VV+  A++  Y K      A  LF  ML
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G  P+  +Y+ LI G C AG +E+A +    M      PD   Y              
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY-------------- 626

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
                 ++       P++VTY  L+ G+C+   VEE  KL + M  +G + N I Y  L+
Sbjct: 627 -----FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +CK G++DEA  +  EM   G    L TYS LI    K  +   A ++ ++M     +
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN   +  ++ GLC+     EA      +    C  +VV Y  MIDG+  +G I   ++L
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
             ++  K ++P+ VT+  LI   CKNG +  A  LL+ +K          Y   +  + +
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK 861

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT--PDQ 483
           E      L LL E+      P    Y ++I  L K  +L+ A++LLE++     T     
Sbjct: 862 E--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYS 919

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
            TYN++I S C    +  AFQL ++M    + P   ++  LI GL  N  +  A  LL
Sbjct: 920 STYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 211/454 (46%), Gaps = 27/454 (5%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN-LRHTDIMW--DLYDDIKVSETPRN 62
           + + G++  A     +M+E+    ++ TY +L++  L+   + +  +L++ +       N
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAG-----------KEFG-----PSVVSLNAIMS 106
           + T S +IDG C+  +++ A    +   G           K++      P+VV+  A++ 
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 647

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEP 166
            +CK    E A+ L   M   G  P+   Y+ LI GLC  G ++EA E   +M  HG   
Sbjct: 648 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707

Query: 167 DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLR 226
              TYS L   +  + +   A KV+ K+L     P++V YT +I G C++G  +E  KL 
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           ++M  +G + NV+ Y+ ++      G+I+  L LL  M + G+ P+ VTY +LI   CK 
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
             +  A  L  EM       ++  +  ++ G   KE I E+    D +   +    + +Y
Sbjct: 828 GALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF-NKEFI-ESLGLLDEIGQDDTAPFLSVY 885

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV----TFNSLIYGFCKNGKVADARRLLD 402
            ++ID  +K   +  A++L  ++     S ++V    T+NSLI   C   KV  A +L  
Sbjct: 886 RLLIDNLIKAQRLEMALRLLEEV--ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 943

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            +   G+ P   ++ + +        I   L LL
Sbjct: 944 EMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 131/578 (22%), Positives = 230/578 (39%), Gaps = 75/578 (12%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N+L+   C  GS   ALE    +      P   TY+ L + F    ++  A  + +++ +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
                D  T        C++G   E L L E   ++ F  + + Y+ L+S +C++   +E
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEE 320

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+  L  M A    P++VTYS L+ G   + ++ +  ++ N M  +   P+     +++ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 317 GLCE-----------KEMITEARM----YFDSLIMSNC---------------------- 339
             C            K+M+    M     ++ LI S C                      
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440

Query: 340 IQDVVLYNIMIDGYVK----LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              VVL  I +  + +     G   +A  + R++I +   P   T++ ++   C   K+ 
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L + +K  GL     TYT  ++++C+ G I++      EM      P  VTYT +I
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM------ 509
               K  K+  A +L E M   G  P+ +TY+ +I   CK   + KA Q+  +M      
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620

Query: 510 ---------WLHNLE-PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
                    +  N E P   TY  L+DG C +  ++ A  LL ++        ++ Y  +
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISI---------------RDYTKSFFCMMLSNGF 604
           I   C  G + +A     +M E GF  ++               +D        ML N  
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            P+  I   M+    + G     ++L  +M + G  P+
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 35/299 (11%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +IDGLC+  +L +A     E +   F  ++ + ++++ RY K+   ++A  +   ML+  
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P+   Y  +I GLC  G  +EA +    M   G +P+ +TY+ +  GF ++ +I    
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM--------------LSQGF 234
           ++++++  KG  P+ VTY VLI   C+ G ++    L E M              + +GF
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859

Query: 235 KLNVI-------------------AYSVLLSSMCKSGRIDEALGLLYEME--AVGLKPDL 273
               I                    Y +L+ ++ K+ R++ AL LL E+   +  L    
Sbjct: 860 NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYS 919

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
            TY+ LI  LC  +KV  A QL++EM  K + P   +  +++ GL     I+EA +  D
Sbjct: 920 STYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/356 (21%), Positives = 134/356 (37%), Gaps = 59/356 (16%)

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           +YN ++D  V+  +     +  +Q+ +          N L+   C+NG  + A   L  +
Sbjct: 167 VYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRL 226

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM------------------------- 439
           K     PS  TY   + A+ +   +     + +EM                         
Sbjct: 227 KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKW 286

Query: 440 -------ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
                  ET+   P  V YT +I GLC+    +EA+  L  M      P+ +TY+T++  
Sbjct: 287 REALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL-- 344

Query: 493 FCKC---KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
            C C   K L +  ++LN M +    P+   +N L+   C +GD   A  LL  + +   
Sbjct: 345 -CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 403

Query: 550 SLTKVAYTTIIKAHCAEGD------VHKAMTFFCQMVEKGF---EISIRDYTK------- 593
               V Y  +I + C + D      +  A   + +M+  G    +I++  +T+       
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463

Query: 594 -----SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                S    M+  GF PD      +L        +   F L   M + GL+ D +
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY 519



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 105/281 (37%), Gaps = 26/281 (9%)

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           RQ+  K  +P    +N+L+    ++         L  I+    E         +  +C  
Sbjct: 157 RQIGYKHTAP---VYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRN 213

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G+    L  L  ++     P+  TY  +I+   K  +L  A  +  +M +  +  D  T 
Sbjct: 214 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTL 273

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
                S CK    R+A  L+      N  P +  Y  LI GLC     + A   L  ++ 
Sbjct: 274 RCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA 330

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPP 606
            +     V Y+T++   C  G ++K     C+ V                 MM+  G  P
Sbjct: 331 TSCLPNVVTYSTLL---C--GCLNKKQLGRCKRV---------------LNMMMMEGCYP 370

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             +I   ++ A+   GD    ++L   M+K G +P   + N
Sbjct: 371 SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN 411


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 189/343 (55%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           +L  GF LNV  +++L++  CK G I +A  +  E+    L+P +V+++ LI G CK   
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGN 290

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           +    +L + M   R  P+ F + A++  LC++  +  A   F  +     I + V++  
Sbjct: 291 LDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTT 350

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I G+ + G I    + Y++++ K + P IV +N+L+ GFCKNG +  AR ++D +   G
Sbjct: 351 LIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L P  VTYTT ++ +C  G++   L + +EM+   I    V ++ +I G+CK+ ++ +A 
Sbjct: 411 LRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAE 470

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           + L +M   G+ PD +TY  ++ +FCK  D +  F+LL +M      P   TYN+L++GL
Sbjct: 471 RALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGL 530

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
           C  G +KNAD LL ++    +    + Y T+++ H    +  K
Sbjct: 531 CKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASK 573



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 188/342 (54%)

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G   +   ++IL   F     I  A KV  ++  +   P +V++  LI GYC++GN++ G
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVG 294

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
            +L+  M     + +V  YS L++++CK  ++D A  L YEM   GL P+ V ++ LI G
Sbjct: 295 FRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHG 354

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
             +  ++    + Y +M SK + P+   +  ++ G C+   +  AR   D +I      D
Sbjct: 355 HSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
            V Y  +IDG+ + G++  A+++ +++ +  I    V F++LI G CK G+V DA R L 
Sbjct: 415 KVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALR 474

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G++P  VTYT  M+A+C++G+ Q    LL+EM++    P  VTY V++ GLCK  
Sbjct: 475 EMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLG 534

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
           +++ A  LL+ M  +GV PD ITYNT++    +  +  K ++
Sbjct: 535 QMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASKHYK 576



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 198/422 (46%), Gaps = 41/422 (9%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSE 58
           L   Y   G + D +      ++ +  V I+   +LL     L  T  +W  Y +I  + 
Sbjct: 176 LMITYMDLGFIPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAG 235

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
            P NVY  +I+++  C++  + DA     E   +   P+VVS N +++ YCK+G  +V  
Sbjct: 236 FPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGF 295

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF----------TND---------- 158
            L   M K    PD F+Y+ LI+ LC    M+ A              ND          
Sbjct: 296 RLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGH 355

Query: 159 ---------------MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
                          M   G++PD + Y+ L  GF     +  A  ++  ++ +G  PD 
Sbjct: 356 SRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           VTYT LI G+C+ G+V+  L++R+ M   G +L+ + +S L+  MCK GR+ +A   L E
Sbjct: 416 VTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALRE 475

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M   G+KPD VTY++++   CK+       +L  EM S    PN   +  +L GLC+   
Sbjct: 476 MLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQ 535

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           +  A M  D+++    + D + YN +++G+ +  N   A + Y+Q  E  I   + ++ S
Sbjct: 536 MKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHAN---ASKHYKQKPEIGIVADLASYKS 592

Query: 384 LI 385
           L+
Sbjct: 593 LV 594



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 177/347 (51%)

Query: 85  FLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
           F  E     F  +V   N +M+++CK G    A+ +F  + K  L P   S+N LI+G C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYC 286

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
             G+++      + M +    PD  TYS L       +++ GA ++  ++  +G  P+ V
Sbjct: 287 KVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDV 346

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            +T LI G+ + G ++   +  + MLS+G + +++ Y+ L++  CK+G +  A  ++  M
Sbjct: 347 IFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              GL+PD VTY+ LI G C+   V  A+++  EM    I  +     A++ G+C++  +
Sbjct: 407 IRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRV 466

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            +A      ++ +    D V Y +M+D + K G+     +L +++      P++VT+N L
Sbjct: 467 IDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVL 526

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           + G CK G++ +A  LLD +   G+ P  +TY T +  +    N  +
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASK 573



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 142/309 (45%), Gaps = 15/309 (4%)

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           ++D  +KL   G     Y ++++     ++  FN L+  FCK G + DA+++ D I    
Sbjct: 211 LLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRS 270

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L P+ V++ T +N YC+ GN+     L   ME     P   TY+ +I  LCK+ K+  A 
Sbjct: 271 LRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAH 330

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +L  +M   G+ P+ + + T+I    +   +    +   +M    L+P    YN L++G 
Sbjct: 331 RLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           C NGDL  A  ++  +    +   KV YTT+I   C  GDV  A+    +M + G E+  
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDR 450

Query: 589 RDYTKSFFCM---------------MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             ++     M               ML  G  PD     +M+ AF + GD  + F+L   
Sbjct: 451 VGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510

Query: 634 MIKSGLLPD 642
           M   G +P+
Sbjct: 511 MQSDGHIPN 519



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 163/353 (46%), Gaps = 20/353 (5%)

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
            Y E+       N +    ++   C++  I +A+  FD +   +    VV +N +I+GY 
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYC 286

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K+GN+    +L   + + R  P + T+++LI   CK  K+  A RL   +   GL P+ V
Sbjct: 287 KVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDV 346

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            +TT ++ +   G I  +    Q+M +K + P  V Y  ++ G CK   L  A  +++ M
Sbjct: 347 IFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+ PD++TY T+I  FC+  D+  A ++  +M  + +E     ++ LI G+C  G +
Sbjct: 407 IRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRV 466

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
            +A+  L  +    +    V YT ++ A C +GD   A T F  + E             
Sbjct: 467 IDAERALREMLRAGMKPDDVTYTMMMDAFCKKGD---AQTGFKLLKE------------- 510

Query: 595 FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               M S+G  P+     V+L    + G + +   L   M+  G++PD    N
Sbjct: 511 ----MQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYN 559



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 114/252 (45%), Gaps = 8/252 (3%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIM--WDLYDD-IKVSETPR 61
           +SR G +        KM    L+  I  YN+L+    ++ D++   ++ D  I+    P 
Sbjct: 355 HSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V T + +IDG C+   +  A+   +E          V  +A++   CK G    A+   
Sbjct: 415 KV-TYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERAL 473

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             ML+ G+ PD  +Y +++   C  G  +   +   +M   G  P+ +TY++L  G   L
Sbjct: 474 REMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKL 533

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            Q+  A  ++  +L  G  PD +TY  L+ G+ +  N  +  K +  +   G   ++ +Y
Sbjct: 534 GQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASKHYKQKPEI---GIVADLASY 590

Query: 242 SVLLSSMCKSGR 253
             L++ + ++ +
Sbjct: 591 KSLVNELYRASK 602


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/547 (25%), Positives = 259/547 (47%), Gaps = 9/547 (1%)

Query: 43  HTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLN 102
             D  ++L D++K      +V  +S +I GLC++ R+ +A+   + + G+E  P+V++ N
Sbjct: 126 QVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFK-SMGEECSPNVITYN 184

Query: 103 AIMSRYCKLGFAEVAKGLFCLMLK-----YGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
            +++  CK    + A  LF  M K     +G  PD  SY+ +I  LC A  +++A E+  
Sbjct: 185 TVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFK 244

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            M   G  P+ +TYS L  G   + + S   +++  +  KG   +I+ +  ++    +  
Sbjct: 245 RMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKND 304

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
             E+  +  E +L  G K NV+ Y+V +  +CK+GR+DEA  +L EM    + PD++TYS
Sbjct: 305 EQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYS 364

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            +I G CK  ++ KA  ++  M      P+      +L G  E +   EA    + ++ +
Sbjct: 365 SIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA 424

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
             I  +  YN+++D      ++  A+++Y ++  K+  P   T+  LI   C+  +V +A
Sbjct: 425 GFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEA 484

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
           +  LD ++   + P+       +   C++G +    ++L  +      P   T+ ++++ 
Sbjct: 485 KEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEE 544

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           L  + K + A +LL      G   D  TY+  +   CK     +A +++ QM L  + P 
Sbjct: 545 LYLRKKWEAASKLLRSP---GFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPD 601

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             TY  ++  LC    +++A      +     +   V YT +I   C+     +A   F 
Sbjct: 602 EGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFE 661

Query: 578 QMVEKGF 584
            MV  GF
Sbjct: 662 AMVAAGF 668



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/568 (24%), Positives = 270/568 (47%), Gaps = 30/568 (5%)

Query: 82  AILFLQETAGKE-FGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILI 140
           A  F Q    K  F  +  +   +++ + K    E A  L    L+    P+   Y  +I
Sbjct: 59  AWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVI 118

Query: 141 HGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
           +G C AG +++A E  ++M   GV+ D + +S L +G     +I  A +  + +  + S 
Sbjct: 119 NGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECS- 177

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVM-----LSQGFKLNVIAYSVLLSSMCKSGRID 255
           P+++TY  ++ G C+   ++E L+L + M      S G + +VI+YS ++ ++CK+ R+D
Sbjct: 178 PNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVD 237

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
           +A      M AVG  P++VTYS LI GLCK D+  + ++L   M  K    N     A+L
Sbjct: 238 KAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAML 297

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
             L + +   +A  +F+ L+ S    +VV YN+ + G  K G + EA ++  +++E +++
Sbjct: 298 HALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVT 357

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P ++T++S+I GFCK G++  A  +   + +H   P  VT+ T ++ + E    +    +
Sbjct: 358 PDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRV 417

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
            ++M      P   TY V++  +C    ++ A+++   M      PD  TY  +I+  C+
Sbjct: 418 HEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCR 477

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
            + + +A + L+ M   N+ P  A  + L++ LC  G++  A  +L ++ E         
Sbjct: 478 ARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGET 537

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVML 615
           +  +++                       E+ +R   ++   ++ S GF  D     + +
Sbjct: 538 FKILVE-----------------------ELYLRKKWEAASKLLRSPGFVADAATYSLCV 574

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPDK 643
               + G      E+   M+  G+ PD+
Sbjct: 575 AEICKAGKPDEAVEVIEQMVLKGVRPDE 602



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/563 (24%), Positives = 262/563 (46%), Gaps = 14/563 (2%)

Query: 29  VSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP---RNVYTNSIVIDGLCQQSRLQDAILF 85
           V+ +    +L  +   D+ W  +        P    N YT +++++   +  R ++A   
Sbjct: 41  VTPEVAGRVLQQVEDPDVAWTFFQ--WAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRL 98

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
           L+E       P+ +    +++ +CK G  + A  L   M + G+  D   ++ LI GLC 
Sbjct: 99  LKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCR 158

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK-----GSD 200
            G ++EALE    MG     P+ ITY+ +  G    ++I  A ++   +  +     G +
Sbjct: 159 KGRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCE 217

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           PD+++Y+ +I   C+   V++  +  + M + G   NV+ YS L+  +CK  R  E L L
Sbjct: 218 PDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLEL 277

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L  M+  G   +++ ++ ++  L K D+  KA Q +  +      PN   +   + GLC+
Sbjct: 278 LLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCK 337

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              + EA      ++ S    DV+ Y+ +IDG+ K G + +A  ++ +++     P  VT
Sbjct: 338 AGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVT 397

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           F +L++GF ++ K  +A R+ + +   G  P   TY   M+  C   +++  L +  +M+
Sbjct: 398 FMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMK 457

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            K   P   TY  +I+ LC+  ++ EA + L+ M    V P+    + ++   CK  ++ 
Sbjct: 458 RKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVD 517

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
           +A  +L+ +     +P   T+ IL++ L +    + A  LL S            Y+  +
Sbjct: 518 EACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRS---PGFVADAATYSLCV 574

Query: 561 KAHCAEGDVHKAMTFFCQMVEKG 583
              C  G   +A+    QMV KG
Sbjct: 575 AEICKAGKPDEAVEVIEQMVLKG 597



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 220/465 (47%), Gaps = 11/465 (2%)

Query: 29  VSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
           +S  T    L   +  D  ++ +  ++      NV T S +IDGLC+  R  + +  L  
Sbjct: 221 ISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLH 280

Query: 89  TAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGS 148
              K FG +++  NA++    K    E A   F  +LK G  P+  +YN+ +HGLC AG 
Sbjct: 281 MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGR 340

Query: 149 MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           ++EA     +M    V PD ITYS +  GF    ++  A  V  ++++    P  VT+  
Sbjct: 341 VDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMT 400

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           L+ G+ +     E  ++ E M++ GF   +  Y+VL+  +C +  ++ AL + ++M+   
Sbjct: 401 LLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 460

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
            +PD  TY+ LI+ LC+  +V +A +  + M +  + PN     A++  LC++  + EA 
Sbjct: 461 RQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEAC 520

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV----TFNSL 384
              D+++   C      + I+++          A +L R       SP  V    T++  
Sbjct: 521 SVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLR-------SPGFVADAATYSLC 573

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           +   CK GK  +A  +++ + L G+ P   TY   + + C    ++  +A  ++M ++  
Sbjct: 574 VAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGC 633

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
            P  VTYT++I   C      EA ++ E M   G TP   T  T+
Sbjct: 634 APGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 35/260 (13%)

Query: 31  IQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
           +QTYN L+  +   D +    ++Y  +K  +   +  T + +I  LC+  R+ +A  FL 
Sbjct: 430 LQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLD 489

Query: 88  ETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP---------------- 131
                   P+    +A++   CK G  + A  +   +++ G  P                
Sbjct: 490 VMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRK 549

Query: 132 ----------------DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
                           DA +Y++ +  +C AG  +EA+E    M   GV PD  TY  + 
Sbjct: 550 KWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVL 609

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
           +    L ++  A    +K+  +G  P +VTYT+LI   C     +E  ++ E M++ GF 
Sbjct: 610 RSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFT 669

Query: 236 LNVIAYSVLLSSMCKSGRID 255
                   L S +  +G  D
Sbjct: 670 PQAQTMRTLSSCLRDAGYQD 689


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 216/406 (53%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F LML     P    ++ L   +   G  E  +  + ++   G+E D  + SIL   F  
Sbjct: 50  FRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCH 109

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           L ++     V+ K+L  G +P IVT+T L+ G C  G +++ + L + ML +G + NV  
Sbjct: 110 LHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYT 169

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+V+++S+ KSG+ +EALG L +ME VG  P++V YS LI G C + ++ +A  +++ M 
Sbjct: 170 YNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMV 229

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           SK  +PN + + +++ G C+ E I EA    D  +    + D+V +  +I G  + G   
Sbjct: 230 SKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPL 289

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A QL+R +     +P+I+T+  L+ G CK+G + +A  L   ++   ++P+ V YT  +
Sbjct: 290 AAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILI 349

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           ++ C+ G I+    L   +  + + P   TYT ++  LCK+  + EA +L   M   G T
Sbjct: 350 DSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCT 409

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           PD+  YN II+ F + KD   A QL+ +M        +AT  +L D
Sbjct: 410 PDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLND 455



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 182/336 (54%)

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G + DI + ++LI  +C +  V+ GL +   +L  G + +++ ++ LL+ +C  G++D+ 
Sbjct: 92  GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQV 151

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           + L  +M   GL+P++ TY+++I  L K  K ++A+    +M      PN   +  ++ G
Sbjct: 152 MMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDG 211

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
            C +  + EAR  FD ++   C  +V  Y  +++GY K+  I EAVQL  + + K + P 
Sbjct: 212 YCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPD 271

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           IVTF ++I G C+ G+   A++L   I  HG  P+ +TY   ++  C+ GN++   AL Q
Sbjct: 272 IVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQ 331

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           EM+   + P  V YT++I  LCK  K+++  +L   +   G+ P+  TY  ++ + CK  
Sbjct: 332 EMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEG 391

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
            + +A +L  +M      P    YN++I G   + D
Sbjct: 392 LIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKD 427



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 189/355 (53%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           SL+ +++ +C L   +    +   +LK GL P   ++  L++GLC+ G M++ +   +DM
Sbjct: 99  SLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDM 158

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
              G++P+  TY+++        + + A   ++++   G  P++V Y+ LI GYC  G +
Sbjct: 159 LVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQM 218

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           +E   + ++M+S+G   NV  Y+ L++  CK  RI+EA+ LL E    GL PD+VT++ +
Sbjct: 219 DEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTI 278

Query: 280 IRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
           I GLC+  +   A QL+  +C+   +PN   +G +L GLC+   + EA   F  +  S  
Sbjct: 279 ISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTV 338

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             ++V+Y I+ID   K G I +  +L+ +LI++ + P++ T+ +L+   CK G + +A +
Sbjct: 339 KPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHK 398

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
           L   ++  G  P    Y   +  + +  +      L++EM  +       T  ++
Sbjct: 399 LFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 198/393 (50%)

Query: 23  KELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDA 82
           K L   V      S +  + H + +  L  +I+     +++++ SI+I+  C   R+   
Sbjct: 57  KPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFG 116

Query: 83  ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
           +  L +       PS+V+   +++  C  G  +    L+  ML  GL P+ ++YN++I+ 
Sbjct: 117 LSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINS 176

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           L  +G   EAL F   M + G  P+ + YS L  G+ L  Q+  A  V   ++ KG  P+
Sbjct: 177 LSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPN 236

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           + TYT L+ GYC+I  +EE ++L +  L +G   +++ ++ ++S +C++GR   A  L  
Sbjct: 237 VYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFR 296

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
            + A G  P+++TY +L+ GLCK   + +A  L+ EM    + PN   +  ++  LC+  
Sbjct: 297 YICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCG 356

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            I + +  F  LI      +V  Y  ++    K G I EA +L+R++ E   +P    +N
Sbjct: 357 KIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYN 416

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            +I GF ++   + AR+L++ +   G    A T
Sbjct: 417 VIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 195/405 (48%), Gaps = 20/405 (4%)

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           ++ +S L SS+ + G  +  + L  E+E +G++ D+ + SILI   C   +V   + + +
Sbjct: 62  IVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLS 121

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           ++    + P+      +L GLC +  + +  M +D +++     +V  YN++I+   K G
Sbjct: 122 KILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSG 181

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
              EA+   +Q+ +    P++V +++LI G+C  G++ +AR + D +   G  P+  TYT
Sbjct: 182 KANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYT 241

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           + MN YC+   I+  + LL E   K + P  VT+T +I GLC+  +   A QL   +   
Sbjct: 242 SLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAH 301

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G TP+ +TY  ++   CK  +L +AF L  +M    ++P    Y ILID LC  G +K+ 
Sbjct: 302 GHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDG 361

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             L   L +  +      YT ++ A C EG + +A   F +M E                
Sbjct: 362 KELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEE---------------- 405

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
               +G  PD+    V++  F Q  D     +L   M+  G   D
Sbjct: 406 ----DGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSAD 446



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 140/276 (50%), Gaps = 3/276 (1%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL--YNLR-HTDIMWDLYDDIKVSETPRNV 63
           S++G  ++A+  + +M+++    ++  Y++L+  Y LR   D    ++D +       NV
Sbjct: 178 SKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNV 237

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           YT + +++G C+  R+++A+  L ET  K   P +V+   I+S  C+ G    A+ LF  
Sbjct: 238 YTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRY 297

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +  +G  P+  +Y +L+ GLC  G++EEA     +M R  V+P+ + Y+IL        +
Sbjct: 298 ICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGK 357

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I    ++  +L+ +G  P++ TYT L+   C+ G + E  KL   M   G   +  AY+V
Sbjct: 358 IKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNV 417

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
           ++    +      A  L+ EM   G   D  T ++L
Sbjct: 418 IIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 254/517 (49%), Gaps = 30/517 (5%)

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
             +AI  L +T  + F P ++S N +M+R  + G  ++A  ++  + + GL+P+ ++Y I
Sbjct: 173 FDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGI 232

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
            I  LC  G+ EEA++   +M   GV P+A+T S   +G     +    ++ ++ L    
Sbjct: 233 FIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAAN 292

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
              D   YT +I G+C    ++E   +   M+++G   +   Y  L+ + CK+G + +A+
Sbjct: 293 WPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAV 352

Query: 259 GLLYEMEAVGLKPDLVT----------------YSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L  +M + G+K +LV                 Y+I++  LCK  KV +A++L NEM  +
Sbjct: 353 ALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGR 412

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
           R+S +   +  ++ G C +  + +A+  F+ +       D+V YNI++ G+ + G   EA
Sbjct: 413 RMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEA 472

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++L   +  + + P+  T N +I G C  GKV +A   L+T++   LE     Y+  ++ 
Sbjct: 473 LELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDG 528

Query: 423 YCEEGNIQRLLALLQEMETKAI--------GPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           YC+    ++   L   +  + I         P  + Y  +I   C+   ++ A QL+ DM
Sbjct: 529 YCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRA-QLVFDM 587

Query: 475 YV-IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
            V  G+TPD ITY  +I  +C+   LR+A  + N M    ++P   TY +++DG     +
Sbjct: 588 LVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNN 647

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
           L++A  L   +    +    V YT ++   C  G  H
Sbjct: 648 LQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGSRH 684



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 167/668 (25%), Positives = 286/668 (42%), Gaps = 86/668 (12%)

Query: 15  AVFVIAKMKELDLKVSIQTYN--SLLYNLRH-TDIMWDLYDDIKVSETPRNVYTNSIVID 71
           AV+  +K    D  + + T     + YNL++  ++ W  +  +K S    NV T + +I 
Sbjct: 45  AVYTYSKDSVGDRFIDLNTSRVVEIFYNLKNEPNLAWSFFTQLKESGFQHNVDTYAALIR 104

Query: 72  GLCQQSRLQDAILFLQETAGKE---FGPSVVSL-----------------------NAIM 105
            LC+    +     L E  G +    G  + +L                       + ++
Sbjct: 105 VLCRWRLERKLQSLLSEIVGSKESVLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLV 164

Query: 106 SRYCKLG-FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
             Y ++G F E    LF    + G  P   S N L++ L   G ++ A+     + R G+
Sbjct: 165 KAYVRVGMFDEAIDALFQTK-RRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGL 223

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            P+  TY I  K          A  V +++   G +P+ VT +  I G C     + G +
Sbjct: 224 NPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYE 283

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
               + +  + ++  AY+ ++   C   ++ EA  +  +M   G+ PD   Y  LI   C
Sbjct: 284 ALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYC 343

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K   + +A+ L+N+M S  I  N               ++ + + + DS I      D V
Sbjct: 344 KAGNLLQAVALHNDMVSNGIKTN---------------LVDQFKEFRDSGI----FLDEV 384

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           LYNI++D   KLG + EAV+L  ++  +R+S  +V + +LI G+C  GK+ DA+ + + +
Sbjct: 385 LYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEM 444

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           K  G+EP  VTY   +  +   G  +  L LL  + T+ + P   T+  +I+GLC   K+
Sbjct: 445 KERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKV 504

Query: 465 QEAVQLLEDMYVIGVTPDQI--TYNTIIRSFCKCKDLRKAFQLLN--------QMWLHNL 514
           +EA   L  +       D+    Y+ ++  +CK    RKA++L +        +M   ++
Sbjct: 505 KEAEAFLNTL------EDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDV 558

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
           EP    Y  LI   C +GD+K A  +   L E  I+   + YT +I  +C    + +A  
Sbjct: 559 EPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARD 618

Query: 575 FFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
            F  M E+G +  +  YT                    V+L    +  +L     L   M
Sbjct: 619 IFNDMKERGIKPDVITYT--------------------VVLDGHSKTNNLQDAINLYDEM 658

Query: 635 IKSGLLPD 642
           I  GL PD
Sbjct: 659 IARGLQPD 666



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/521 (26%), Positives = 247/521 (47%), Gaps = 31/521 (5%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RH--TDIMWDLYDDIKVS 57
           ML   Y R GM  +A+  + + K       I + N L+  L  H   D+   +Y  +K  
Sbjct: 162 MLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRL 221

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               N YT  I I  LC++   ++A+   +E       P+ V+ +  +   C    +++ 
Sbjct: 222 GLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLG 281

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL--- 174
                 +       D F+Y  +I G C    ++EA +   DM   G+ PD   Y  L   
Sbjct: 282 YEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHA 341

Query: 175 -AKGFHLLSQI-------SGAWKV-----IQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
             K  +LL  +       S   K       ++    G   D V Y +++   C++G VEE
Sbjct: 342 YCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEE 401

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            ++L   M  +   L+V+ Y+ L++  C  G++ +A  +  EM+  G++PD+VTY+IL+ 
Sbjct: 402 AVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVG 461

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           G  +     +A++L + + ++ + PNS  H  I+ GLC    + EA  + ++L    C++
Sbjct: 462 GFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTL-EDKCLE 520

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI--------SPSIVTFNSLIYGFCKNGK 393
           +   Y+ M+DGY K     +A +L+ +L ++ I         P+ + +  LI  FC++G 
Sbjct: 521 N---YSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGD 577

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           +  A+ + D +   G+ P  +TYT  +N YC    ++    +  +M+ + I P  +TYTV
Sbjct: 578 MKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTV 637

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           V+ G  K   LQ+A+ L ++M   G+ PD +TY  ++   C
Sbjct: 638 VLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKC 678



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 215/448 (47%), Gaps = 31/448 (6%)

Query: 8   RTGMVHDAVFVIAKMKELDLK---VSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
           R G   +AV V  +M+E  +    V+  TY   L + + +D+ ++    ++ +  P + +
Sbjct: 239 RKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTF 298

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             + VI G C + +L++A     +   +   P      A++  YCK G    A  L   M
Sbjct: 299 AYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDM 358

Query: 125 LKYGLHP----------------DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           +  G+                  D   YNI++  LC  G +EEA+E  N+M    +  D 
Sbjct: 359 VSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDV 418

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           + Y+ L  G+ L  ++  A  + +++  +G +PDIVTY +L+ G+ + G  +E L+L + 
Sbjct: 419 VHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDC 478

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           + +QG K N   ++ ++  +C +G++ EA   L  +E   L+     YS ++ G CK + 
Sbjct: 479 IGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANF 534

Query: 289 VHKAIQLYNEMCSKRI--------SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
             KA +L++ +  + I         PN   +G ++   C    +  A++ FD L+     
Sbjct: 535 TRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGIT 594

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            DV+ Y +MI+GY ++  + EA  ++  + E+ I P ++T+  ++ G  K   + DA  L
Sbjct: 595 PDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINL 654

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
            D +   GL+P  VTYT  +   C  G+
Sbjct: 655 YDEMIARGLQPDIVTYTALLPGKCNFGS 682



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 39/289 (13%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +L +++K      +V   + +I G C Q +L DA    +E   +   P +V+ N ++  +
Sbjct: 404 ELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGF 463

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM--------- 159
            + G  + A  L   +   GL P++ ++N +I GLC+AG ++EA  F N +         
Sbjct: 464 SRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYS 523

Query: 160 ----------------------GRHG--------VEPDAITYSILAKGFHLLSQISGAWK 189
                                  + G        VEP+ I Y  L   F     +  A  
Sbjct: 524 AMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQL 583

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           V   L+ +G  PD++TYT++I GYC++  + E   +   M  +G K +VI Y+V+L    
Sbjct: 584 VFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHS 643

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           K+  + +A+ L  EM A GL+PD+VTY+ L+ G C     H   Q   E
Sbjct: 644 KTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGSRHFDNQWLEE 692



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 15/258 (5%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDIKVSETPRN 62
           Y   G + DA  +  +MKE  ++  I TYN L+       +     +L D I       N
Sbjct: 428 YCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPN 487

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             T++ +I+GLC   ++++A  FL     K     + + +A++  YCK  F   A  LF 
Sbjct: 488 SATHNRIIEGLCMAGKVKEAEAFLNTLEDK----CLENYSAMVDGYCKANFTRKAYELFS 543

Query: 123 LMLKYGL--------HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
            + K G+         P+   Y  LI   C  G M+ A    + +   G+ PD ITY+++
Sbjct: 544 RLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMM 603

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G+  ++ +  A  +   +  +G  PD++TYTV++ G+ +  N+++ + L + M+++G 
Sbjct: 604 INGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGL 663

Query: 235 KLNVIAYSVLLSSMCKSG 252
           + +++ Y+ LL   C  G
Sbjct: 664 QPDIVTYTALLPGKCNFG 681


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 148/576 (25%), Positives = 278/576 (48%), Gaps = 6/576 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDL-YDDIKVSETPR 61
           Y R      A+ V  ++    L   + +YN+L+         D  ++L Y  I+ S +P 
Sbjct: 132 YRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPD 191

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            V  NS+ IDGLC+   +  +   L++       P+  + N+++  Y   G  + +  +F
Sbjct: 192 VVTYNSL-IDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVF 250

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   GL P   + N  IH LC    ++EA +  + M   G +P+ I+YS L  G+   
Sbjct: 251 KEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAE 310

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
              +    ++  ++ KG  P+   + +LI  Y + G +++ + + E M ++G   + + +
Sbjct: 311 GCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 370

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++SS+C+ GR+D+AL     M  +G+ P    Y  LI+G C   ++ KA +L +EM +
Sbjct: 371 ATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMN 430

Query: 302 KRISPNSFAH-GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           K I P    +  +I+  L ++  + E +   D ++ +    +VV +N +++GY  +GN+ 
Sbjct: 431 KDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNME 490

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  L   +    I P+   + +L+ G+CKNG++ DA  +   +   G++P++V Y   +
Sbjct: 491 EAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIIL 550

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +   +         +  EM       +  TY VV+ GLC+     EA  LLE ++ + V 
Sbjct: 551 HGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK 610

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            D IT+N +I +  K    ++A +L   +  + L PT  TYN++I  L      + AD L
Sbjct: 611 FDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNL 670

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            +S+++   +        I++    + +V KA  + 
Sbjct: 671 FISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYL 706



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 144/589 (24%), Positives = 256/589 (43%), Gaps = 56/589 (9%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
            P++ + N ++  Y ++   E+A  +F  +L+ GL PD  SYN LI G    G +++A E
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
               M    V PD +TY+ L  G     ++  + +V+++++  G  P+  TY  LI GY 
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
             G  +E +++ + M S G    V+  +  + ++C+  RI EA  +   M   G KP+++
Sbjct: 239 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 298

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           +YS L+ G   +        L N M SK I PN      ++       M+ +A + F+ +
Sbjct: 299 SYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDM 358

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC----- 389
                I D V +  +I    ++G + +A+  +  +++  + PS   +  LI G C     
Sbjct: 359 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGEL 418

Query: 390 -------------------------------KNGKVADARRLLDTIKLHGLEPSAVTYTT 418
                                          K G+VA+ + ++D +   G  P+ VT+ +
Sbjct: 419 VKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNS 478

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            M  YC  GN++   ALL  M +  I P    Y  ++ G CK  ++ +A+ +  DM   G
Sbjct: 479 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 538

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           V P  + YN I+    + +    A ++ ++M       +  TY +++ GLC N     A+
Sbjct: 539 VKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEAN 598

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            LL  L   N+    + +  +I A    G   +A   F  +   G   ++  Y      +
Sbjct: 599 MLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYN-----L 653

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           M+SN    +         ++ +  +L    E      KSG  PD  L+N
Sbjct: 654 MISNLIKEE---------SYEEADNLFISVE------KSGRAPDSRLLN 687



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 127/512 (24%), Positives = 241/512 (47%), Gaps = 6/512 (1%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVYTNSIVIDGL 73
           V+ +M +  ++ + +TYNSL+Y    T  MW     ++ ++  S     V   +  I  L
Sbjct: 214 VLEQMVDAGIRPNNKTYNSLIYGY-STAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHAL 272

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           C+ +R+++A         K   P+++S + ++  Y   G       L  LM+  G+ P+ 
Sbjct: 273 CRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNH 332

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
             +NILI+     G M++A+    DM   G+ PD +T++ +      + ++  A      
Sbjct: 333 RFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 392

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY-SVLLSSMCKSG 252
           ++  G  P    Y  LI G C  G + +  +L   M+++      + Y S +++++ K G
Sbjct: 393 MVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEG 452

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
           R+ E   ++  M   G +P++VT++ L+ G C    + +A  L + M S  I PN + +G
Sbjct: 453 RVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 512

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++ G C+   I +A   F  ++        VLYNI++ G  +      A +++ ++IE 
Sbjct: 513 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIES 572

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
             + SI T+  ++ G C+N    +A  LL+ +    ++   +T+   ++A  + G  Q  
Sbjct: 573 GTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEA 632

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             L   + T  + PT  TY ++I  L K+   +EA  L   +   G  PD    N I+R 
Sbjct: 633 KELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRM 692

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
             K  ++ KA   L+ +  +NL   ++T ++L
Sbjct: 693 LLKKAEVAKASNYLSIIDENNLTLEASTISLL 724



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/509 (24%), Positives = 230/509 (45%), Gaps = 4/509 (0%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSE 58
           L + YS  GM  ++V V  +M    L   +   NS ++ L RH  I    D++D + +  
Sbjct: 233 LIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKG 292

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              N+ + S ++ G   +    +    +     K   P+    N +++ Y + G  + A 
Sbjct: 293 PKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAM 352

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M   G+ PD  ++  +I  LC  G +++AL   N M   GV P    Y  L +G 
Sbjct: 353 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGC 412

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTY-TVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
               ++  A ++I +++ K   P  V Y + +I    + G V EG  + ++M+  G + N
Sbjct: 413 CNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPN 472

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           V+ ++ L+   C  G ++EA  LL  M ++G++P+   Y  L+ G CK  ++  A+ ++ 
Sbjct: 473 VVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFR 532

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M  K + P S  +  IL GL +    T A+  F  +I S     +  Y +++ G  +  
Sbjct: 533 DMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNN 592

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
              EA  L  +L    +   I+TFN +I    K G+  +A+ L   I  +GL P+  TY 
Sbjct: 593 CTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYN 652

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++   +E + +    L   +E     P       +++ L K+ ++ +A   L  +   
Sbjct: 653 LMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDEN 712

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
            +T +  T + +   F +    R+  +LL
Sbjct: 713 NLTLEASTISLLASLFSREGKCREHIKLL 741



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 15/220 (6%)

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
           A  PT  TY ++I    +  + + A+ +   +   G+ PD  +YNT+I  F K  ++ KA
Sbjct: 117 ADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKA 176

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
           ++L  +M   ++ P   TYN LIDGLC   ++  ++ +L  + +  I      Y ++I  
Sbjct: 177 YELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYG 236

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRD---------------YTKSFFCMMLSNGFPPD 607
           +   G   +++  F +M   G    + +                 K  F  M+  G  P+
Sbjct: 237 YSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPN 296

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                 +L  +   G   ++  L  +M+  G++P+    N
Sbjct: 297 IISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFN 336


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 226/435 (51%)

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           E A  LF  M+     P    +  L+         E  + F+  M  +G+  D  +++IL
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
              F   S++S A  V+ K++  G +P IVT+  L+ G+C +  + +   L  +M+  G+
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
           + NV+ Y+ L+  +CK+G ++ AL LL EME  GL  D+VTY+ L+ GLC   +   A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           +  +M  + I+P+     A++    ++  + EA+  +  +I S+   + V YN +I+G  
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
             G + +A + +  +  K   P++VT+N+LI GFCK   V +  +L   +   G      
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           TY T ++ YC+ G ++  L +   M ++ + P  +T+ +++ GLC   +++ A+   +DM
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
                    + YN +I   CK   + KA++L  ++ +  ++P + TY I+I GLC NG  
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472

Query: 535 KNADCLLVSLQEHNI 549
           + AD L+  ++E  I
Sbjct: 473 READELIRRMKEEGI 487



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 211/443 (47%), Gaps = 35/443 (7%)

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
           G     R +DA     E    +  PS+V    +++    L   E        M  YG+  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D +S+ ILIH  C    +  AL     M + G EP  +T+  L  GF L+++I  A+ ++
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             ++  G +P++V Y  LI G C+ G +   L+L   M  +G   +V+ Y+ LL+ +C S
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           GR  +A  +L +M    + PD+VT++ LI    KQ  + +A +LY EM    + PN+  +
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
            +I+ GLC    + +A+  FD +    C  +VV YN +I G+ K   + E ++L++++  
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADA---------RR-----LLDTIKLHGLEPSA---- 413
           +  +  I T+N+LI+G+C+ GK+  A         RR     +   I LHGL  +     
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404

Query: 414 -----------------VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
                            V Y   ++  C+   +++   L   +  + + P   TYT++I 
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464

Query: 457 GLCKQWKLQEAVQLLEDMYVIGV 479
           GLCK    +EA +L+  M   G+
Sbjct: 465 GLCKNGPRREADELIRRMKEEGI 487



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 198/419 (47%)

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L  GF    +   A+ +  +++     P IV +T L+     +   E  +   + M   G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              ++ ++++L+   C+  R+  AL +L +M  +G +P +VT+  L+ G C  +++  A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            L   M      PN   +  ++ GLC+   +  A    + +       DVV YN ++ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
              G   +A ++ R ++++ I+P +VTF +LI  F K G + +A+ L   +    ++P+ 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTY + +N  C  G +         M +K   P  VTY  +I G CK   + E ++L + 
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G   D  TYNT+I  +C+   LR A  +   M    + P   T+ IL+ GLCVNG+
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +++A      ++E    +  VAY  +I   C    V KA   FC++  +G +   R YT
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 140/332 (42%), Gaps = 15/332 (4%)

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           +A   F  ++ S  +  +V +  ++     L      +   +++    IS  + +F  LI
Sbjct: 54  DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
           + FC+  +++ A  +L  +   G EPS VT+ + ++ +C    I    +L+  M      
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  V Y  +I GLCK  +L  A++LL +M   G+  D +TYNT++   C       A ++
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           L  M   ++ P   T+  LID     G+L  A  L   + + ++    V Y +II   C 
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MMLSNGFPPDQEI 610
            G ++ A   F  M  KG   ++  Y    S FC              M   GF  D   
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              ++  + Q G L    ++   M+   + PD
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 108/261 (41%), Gaps = 20/261 (7%)

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           GF  + +  DA  L   +      PS V +T  + A       + ++   Q+ME   I  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              ++T++I   C+  +L  A+ +L  M  +G  P  +T+ +++  FC    +  AF L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
             M     EP    YN LIDGLC NG+L  A  LL  +++  +    V Y T++   C  
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
           G    A               +RD        M+     PD      ++  F + G+L  
Sbjct: 225 GRWSDAARM------------LRD--------MMKRSINPDVVTFTALIDVFVKQGNLDE 264

Query: 627 VFELAAVMIKSGLLPDKFLIN 647
             EL   MI+S + P+    N
Sbjct: 265 AQELYKEMIQSSVDPNNVTYN 285



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 38/212 (17%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPR 61
           V+ + G + +A  +  +M +  +  +  TYNS++  L     ++D    +D +       
Sbjct: 255 VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV T + +I G C+   + + +   Q  + + F   + + N ++  YC++G   VA  +F
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIF 374

Query: 122 CLMLKYGLHPDAFS-----------------------------------YNILIHGLCIA 146
           C M+   + PD  +                                   YNI+IHGLC A
Sbjct: 375 CWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKA 434

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             +E+A E    +   GV+PDA TY+I+  G 
Sbjct: 435 DKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 156/623 (25%), Positives = 283/623 (45%), Gaps = 39/623 (6%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPR 61
           V++R G V  A+ ++ +MK   L   I  YN            D+ W  + ++K      
Sbjct: 239 VFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMP 298

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQE---------------------TAGK---EFG-- 95
           +  T + +I  LC+ +RL +A+   ++                     +AGK    +G  
Sbjct: 299 DDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLL 358

Query: 96  ---------PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
                    PSV++ N I++   K    E A  +F  M +  + P+  +YNILI  LC  
Sbjct: 359 ERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCRE 417

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G +  ALE  +DM R G+ P+ +T +I+        ++  A  + + +  K   P+ VT+
Sbjct: 418 GKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTF 477

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
           + LI G  + G V++   L E ML  G     I Y+ L+ S  K GR ++   +  EM  
Sbjct: 478 SSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVH 537

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            G  PDL   +  +  + K  +  K   L+ E+ +    P++ ++  ++ GL +  +  E
Sbjct: 538 TGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANE 597

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
               F ++    C+ D   YN +IDG+ K G + +A QL  ++  K   P++VT+ S+I 
Sbjct: 598 TYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVID 657

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
           G  K  ++ +A  L +  K +G++ + V Y++ ++ + + G I     +++E+  K + P
Sbjct: 658 GLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 717

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              T+  ++  L K  ++ EA+   + M  +   P+QITY+ +I   C+ +   KAF   
Sbjct: 718 NVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFW 777

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
            +M    L+P + TY  +I GL   G++  A  L    + +       +Y  +I+   + 
Sbjct: 778 QEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSA 837

Query: 567 GDVHKAMTFFCQMVEKGFEISIR 589
                A   F +   KG  I  +
Sbjct: 838 NKAMDAYALFEETRLKGCNIHTK 860



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/623 (23%), Positives = 284/623 (45%), Gaps = 39/623 (6%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
           ++  + +A  +I  M++   + +   Y  L   L  +R  D M  L+  ++      NV+
Sbjct: 172 KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVH 231

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             + +I    ++ R+  A+  L E         +V  N  +  + K G  +++   F  M
Sbjct: 232 LFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEM 291

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             +GL PD  +Y  +I  LC A  ++EA+E    + ++   P A  Y+ +  G+    + 
Sbjct: 292 KSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKF 351

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A+ ++++   KGS P ++ Y  ++    +   VEE L++ E M       NV  Y++L
Sbjct: 352 DEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP-NVPTYNIL 410

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +C+ G+++ AL +  +ME  GL P+++T +I+I  LCK  K+ +A  ++  M  K  
Sbjct: 411 IDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVC 470

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +PN+    +++ GL +   + +A   ++ ++    +   ++Y  +I  + K G   +  +
Sbjct: 471 TPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHK 530

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT------- 417
           +Y++++    SP +   N+ +    K G+    R L   I  HG  P A +Y+       
Sbjct: 531 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLV 590

Query: 418 ----------------------------TFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
                                         ++ +C+ G + +   LL+EM+ K   PT V
Sbjct: 591 KAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVV 650

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TY  VI GL K  +L EA  L E+    G+  + + Y+++I  F K   + +A+ ++ ++
Sbjct: 651 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL 710

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               L P   T+N L+D L    ++  A     S+++      ++ Y+ +I   C     
Sbjct: 711 MQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKF 770

Query: 570 HKAMTFFCQMVEKGFEISIRDYT 592
           +KA  F+ +M + G + +   YT
Sbjct: 771 NKAFVFWQEMQKLGLKPNTITYT 793



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 151/614 (24%), Positives = 254/614 (41%), Gaps = 88/614 (14%)

Query: 86  LQETAGKEFGPSV-----VSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILI 140
           L+E +   FGPS      +  N + SR  +  F      +   M K+   P   +Y ILI
Sbjct: 148 LEEMSLSGFGPSSNISIELVANCVKSRKLREAF-----DIIQTMRKFKFRPAFSAYTILI 202

Query: 141 HGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
             L      +  L   + M   G E +   ++ L + F    ++  A  ++ ++     D
Sbjct: 203 GALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLD 262

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL-- 258
            DIV Y V I  + + G V+   K    M S G   + + Y+ ++  +CK+ R+DEA+  
Sbjct: 263 ADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVEL 322

Query: 259 ---------------------------------GLLYEMEAVGLKPDLVTYSILIRGLCK 285
                                            GLL   +A G  P ++ Y+ ++  L K
Sbjct: 323 FEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGK 382

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
           + +V +A++++ EM  +   PN   +  ++  LC +  +  A    D +  +    +V+ 
Sbjct: 383 KRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLT 441

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
            NIMID   K   + EA  ++  + +K  +P+ VTF+SLI G  K G+V DA  L + + 
Sbjct: 442 VNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKML 501

Query: 406 LHGLEPSAVTYT-----------------------------------TFMNAYCEEGNIQ 430
             G  P A+ YT                                   T+M+   + G  +
Sbjct: 502 DCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETE 561

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           +  AL +E+      P   +Y+++I GL K     E  +L   M   G   D   YN +I
Sbjct: 562 KGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVI 621

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
             FCK   + KA+QLL +M +    PT  TY  +IDGL     L  A  L    + + I 
Sbjct: 622 DGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIK 681

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEI 610
           L  V Y+++I      G + +A     ++++KG   ++  +     C++  +     +EI
Sbjct: 682 LNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN----CLL--DALVKAEEI 735

Query: 611 CEVMLIAFHQGGDL 624
            E  LI F    DL
Sbjct: 736 NEA-LICFQSMKDL 748



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 207/465 (44%), Gaps = 21/465 (4%)

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A+ +IQ +      P    YT+LI    ++   +  L L   M   G+++NV  ++
Sbjct: 175 KLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFT 234

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+    + GR+D AL LL EM++  L  D+V Y++ I    K  KV  + + ++EM S 
Sbjct: 235 TLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSH 294

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+   + +++  LC+   + EA   F+ L  +  +     YN MI GY   G   EA
Sbjct: 295 GLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEA 354

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
             L  +   K   PS++ +N ++    K  +V +A R+ + +K   + P+  TY   ++ 
Sbjct: 355 YGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDM 413

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C EG +   L +  +ME   + P  +T  ++I  LCK  KL+EA  + E M     TP+
Sbjct: 414 LCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPN 473

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +T++++I    KC  +  A+ L  +M      P +  Y  LI      G  ++      
Sbjct: 474 AVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG----- 528

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
               H I      Y  ++   C+       +T     ++  F+    +  ++ F  + ++
Sbjct: 529 ----HKI------YKEMVHTGCSPD-----LTLINTYMDCVFKAGETEKGRALFREINAH 573

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           GF PD     +++    + G     +EL   M + G + D    N
Sbjct: 574 GFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYN 618


>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Brachypodium distachyon]
          Length = 721

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/540 (26%), Positives = 250/540 (46%), Gaps = 14/540 (2%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A+ +  LM++ G+      +  L+     AG +  A+     M   G  PD    ++   
Sbjct: 145 ARRVVRLMIRRGVRRGPRQFAHLMLSYSRAGKLRSAMRVLQLMQTDGCAPDISICNVAVN 204

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
              +  ++  A     ++   G +PD+VTY  LI G C +  V E L++  VML  G   
Sbjct: 205 VLVVAGRVDKALGFADRMRRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPP 264

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEA-VGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           + I+Y  ++S +CK  R+ E   LL  M    GL  D VTY++LI  L K     +A++ 
Sbjct: 265 DKISYYTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEF 324

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
             E   KR   +   + A++   C    + EA+     +I   C  DVV Y+ ++DG+ +
Sbjct: 325 LRESEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCR 384

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +G I +A ++ + + +    P+IVT  +L+ G CK GK ++A  LL+        PS +T
Sbjct: 385 IGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDIT 444

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y+  M+ +  EG ++    ++ +M  K   PT V   ++I  LCK+ K  EA + +E   
Sbjct: 445 YSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQ 504

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
             G T + + + T+I  F +  DL  A  LL+ ++L N  P   TY ++++ L   G LK
Sbjct: 505 SKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLK 564

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM-------------TFFCQMVEK 582
            A  L+  +    +  T V Y T+I  +C +G V + +             + + Q++EK
Sbjct: 565 EATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEELVDLLDKMLARQELKSVYNQVIEK 624

Query: 583 GFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                  +        +L      D + C +++ +F   G     + +A  M +  L+PD
Sbjct: 625 LCAFGKLNEAYGLLSKVLRTASQRDAQTCHILMESFLNRGLTIQAYNVACRMFQRNLIPD 684



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/557 (26%), Positives = 262/557 (47%), Gaps = 16/557 (2%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMK----ELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVS 57
           L   YSR G +  A+ V+  M+      D+ +     N L+   R  D      D ++  
Sbjct: 167 LMLSYSRAGKLRSAMRVLQLMQTDGCAPDISICNVAVNVLVVAGR-VDKALGFADRMRRV 225

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               +V T + +I GLC   R+ +A+  +         P  +S   +MS  CK       
Sbjct: 226 GVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEV 285

Query: 118 KGLFCLMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           + L   M    GL  D  +YN+LIH L   G  +EALEF  +        D + YS +  
Sbjct: 286 RSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAVVH 345

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F L  +++ A +++ +++ K   PD+VTY+ ++ G+C+IG +++  K+ + M   G K 
Sbjct: 346 SFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKP 405

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N++ ++ LL+ +CK G+  EA  LL +       P  +TYS+++ G  ++ K+ ++  + 
Sbjct: 406 NIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDVV 465

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M  K   P +     ++  LC++    EA+ + +      C  +VV +  +I G+ + 
Sbjct: 466 AQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSRQ 525

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G++  A+ L   L      P +VT+  ++    + G++ +A  L++ +   GL P+ VTY
Sbjct: 526 GDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTY 585

Query: 417 TTFMNAYCEEGNIQRLLALLQEM----ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            T ++ YCE+G ++ L+ LL +M    E K++      Y  VI+ LC   KL EA  LL 
Sbjct: 586 RTVIHRYCEKGTVEELVDLLDKMLARQELKSV------YNQVIEKLCAFGKLNEAYGLLS 639

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            +       D  T + ++ SF       +A+ +  +M+  NL P       + D L +  
Sbjct: 640 KVLRTASQRDAQTCHILMESFLNRGLTIQAYNVACRMFQRNLIPDLKLCQKVDDRLVLEE 699

Query: 533 DLKNADCLLVSLQEHNI 549
             + A  L+V   E  +
Sbjct: 700 RKQAAGKLIVKFVERGL 716


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 190/341 (55%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           +L  G+  NV  ++VL++ +CK G++ +A  +  E+   GL+P  V+++ LI G CK   
Sbjct: 223 ILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGN 282

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + +  +L   M   R+ P+ F + A++ GLC++  + +A   F  +     + + V +  
Sbjct: 283 LEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTT 342

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +I+G  K G +  A+++Y+Q+  K +   +V +N+LI G CK G   +AR+ +  +   G
Sbjct: 343 LINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRG 402

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L P   TYTT ++  C+EG+++  L + +EM  + I   +V +T +I GLC+  K+ +A 
Sbjct: 403 LIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAE 462

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           + L +M   G+ PD  TY  ++  FCK  D++  F+LL +M      P   TYN+L++GL
Sbjct: 463 RTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGL 522

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
           C  G +KNAD LL ++    +    + Y  +++ HC  G +
Sbjct: 523 CKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKL 563



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 205/414 (49%), Gaps = 70/414 (16%)

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           A+ F  E     + P+V + N +M+R CK G  + A+ +F  + K GL P A S+N LI+
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
           G C +G++EE                         GF L   +   ++V          P
Sbjct: 276 GYCKSGNLEE-------------------------GFRL-KMVMEEFRVF---------P 300

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D+ TY+ LI G C+   +E+   L + M  +G   N + ++ L++  CK+GR+D AL + 
Sbjct: 301 DVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIY 360

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            +M   GLK DLV Y+ LI GLCK     +A +   EM  + + P+ F            
Sbjct: 361 QQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFT----------- 409

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
                                   Y  ++DG  K G++  A+++ ++++++ I    V F
Sbjct: 410 ------------------------YTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAF 445

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
            ++I G C++GK+ DA R L  +   GL+P   TYT  M+ +C++G+++    LL+EM++
Sbjct: 446 TAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQS 505

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
               P  +TY V++ GLCKQ +++ A  LL  M  +GV PD ITYN +++  CK
Sbjct: 506 DGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCK 559



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 194/395 (49%), Gaps = 3/395 (0%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPR 61
           VY+  G V DA+      K+ +LK+       LL     +    +  + Y +I  S  P 
Sbjct: 171 VYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPP 230

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NVYT +++++ LC++ +++DA L   E       P+ VS N +++ YCK G  E    L 
Sbjct: 231 NVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLK 290

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            +M ++ + PD F+Y+ LI GLC    +E+A     +M   G+ P+ +T++ L  G    
Sbjct: 291 MVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKN 350

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A ++ Q++  KG   D+V Y  LI G C+ G   E  K    M  +G   +   Y
Sbjct: 351 GRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTY 410

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + LL   CK G ++ AL +  EM   G++ D V ++ +I GLC+  K+  A +   EM  
Sbjct: 411 TTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLR 470

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             + P+   +  ++ G C+K  +         +     I  V+ YN++++G  K G +  
Sbjct: 471 AGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKN 530

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           A  L   ++   + P  +T+N L+ G CK+GK+ D
Sbjct: 531 ADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGD 565



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 175/342 (51%)

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG 252
           ++L  G  P++ T+ VL+   C+ G V++   + + +   G +   ++++ L++  CKSG
Sbjct: 222 EILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSG 281

Query: 253 RIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHG 312
            ++E   L   ME   + PD+ TYS LI GLCK+ ++  A  L+ EMC + + PN     
Sbjct: 282 NLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFT 341

Query: 313 AILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK 372
            ++ G C+   +  A   +  +       D+VLYN +IDG  K G   EA +   ++ ++
Sbjct: 342 TLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKR 401

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
            + P   T+ +L+ G CK G +  A  +   +   G++   V +T  ++  C +G I   
Sbjct: 402 GLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDA 461

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
              L+EM    + P   TYT+V+ G CK+  ++   +LL++M   G  P  ITYN ++  
Sbjct: 462 ERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNG 521

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
            CK   ++ A  LLN M    + P   TYNIL+ G C +G L
Sbjct: 522 LCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKL 563



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 170/356 (47%)

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
           ++ ++G   +   +  L+S   + G + +A+      +   LK        L+  + K  
Sbjct: 152 ILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMS 211

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
               A++ Y E+      PN +    ++  LC++  + +A++ FD +  +      V +N
Sbjct: 212 SPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFN 271

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I+GY K GN+ E  +L   + E R+ P + T+++LI G CK  ++ DA  L   +   
Sbjct: 272 TLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDR 331

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           GL P+ VT+TT +N  C+ G +   L + Q+M TK +    V Y  +I GLCK    +EA
Sbjct: 332 GLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREA 391

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            + + +M   G+ PD+ TY T++   CK  DL  A ++  +M    ++  +  +  +I G
Sbjct: 392 RKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISG 451

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           LC +G + +A+  L  +    +      YT ++   C +GDV        +M   G
Sbjct: 452 LCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDG 507



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 120/244 (49%), Gaps = 3/244 (1%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D+  ++Y  +       ++   + +IDGLC+    ++A  F+ E   +   P   +   +
Sbjct: 354 DLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTL 413

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +   CK G  E+A  +   M+K G+  D  ++  +I GLC  G + +A     +M R G+
Sbjct: 414 LDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGL 473

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
           +PD  TY+++  GF     +   +K+++++   G  P ++TY VL+ G C+ G V+    
Sbjct: 474 KPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADM 533

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L   ML+ G   + I Y++LL   CK G++ +   +  EM   GL  D  +Y  L+  L 
Sbjct: 534 LLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM---GLVSDYASYRSLLHELS 590

Query: 285 KQDK 288
           K  K
Sbjct: 591 KASK 594


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 232/474 (48%), Gaps = 1/474 (0%)

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
           +  ++  + ++G    A G+   M   GL P + + N ++     +G ++ A    ++M 
Sbjct: 173 MRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMS 232

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
             GV PD+ ++ ++  G     +I  A + +  ++ +G  PD  T T+++   C+ G V 
Sbjct: 233 VRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVN 292

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
             +     M+  GFK N+I ++ L+  +CK G I +A  +L EM   G KP++ T++ LI
Sbjct: 293 RAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 352

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRI-SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
            GLCK+    KA +L+ ++    I  PN   + +++ G C+++ +  A M F  +     
Sbjct: 353 DGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 412

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             +V  Y  +I+G+ K GN   A +L   + ++   P+I T+N++I   CK  +  +A  
Sbjct: 413 FPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYE 472

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           LL+     GLE   VTYT  +   C++ +I++ LA    M             ++I   C
Sbjct: 473 LLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFC 532

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           +Q K++E+ +L + +  +G+ P + TY ++I  +CK  D   A +  + M  H   P S 
Sbjct: 533 RQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSF 592

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           TY  LI GLC    +  A  L  ++ +  +S  +V   T+   +C   D   AM
Sbjct: 593 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAM 646



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/546 (24%), Positives = 243/546 (44%), Gaps = 48/546 (8%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           RL +A+  + +   +   PS +++N ++    + G  + A+ +F  M   G+ PD+ S+ 
Sbjct: 185 RLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFK 244

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           +++ G    G ++EA  + + M + G  PD  T +++         ++ A    +K++  
Sbjct: 245 LMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDL 304

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG----- 252
           G  P+++ +T LI G C+ G++++  ++ E M+  G+K NV  ++ L+  +CK G     
Sbjct: 305 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 364

Query: 253 -------------------------------RIDEALGLLYEMEAVGLKPDLVTYSILIR 281
                                          +++ A  L   M+  GL P++ TY+ LI 
Sbjct: 365 FRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 424

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           G CK     +A +L N M  +   PN + + A++  LC+K    EA    +         
Sbjct: 425 GHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEA 484

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D V Y I+I    K  +I +A+  + ++ +      +   N LI  FC+  K+ ++ RL 
Sbjct: 485 DGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 544

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +   GL P+  TYT+ ++ YC+EG+    L     M+     P   TY  +I GLCK+
Sbjct: 545 QLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 604

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL----NQMWLHNLEPT 517
             + EA +L E M   G++P ++T  T+   +CK  D   A  +L     ++W+      
Sbjct: 605 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKKLWIR----- 659

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             T   L+  LC    +  A      L E + S  +V       A C+E   +  +    
Sbjct: 660 --TVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTA-CSESGKNNLVADLT 716

Query: 578 QMVEKG 583
           + + +G
Sbjct: 717 ERISRG 722



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 200/417 (47%), Gaps = 16/417 (3%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +L +  + GR++EA+G++ +M+  GL P  +T + ++    +   +  A  +++EM  + 
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P+S +   +++G      I EA  +   +I    I D     +++    + G +  A+
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
             +R++I+    P+++ F SLI G CK G +  A  +L+ +  +G +P+  T+T  ++  
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355

Query: 424 CEEGNIQRLLAL-LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           C+ G  ++   L L+ + +    P   TYT +I G CK+ KL  A  L   M   G+ P+
Sbjct: 356 CKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 415

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             TY T+I   CK  +  +A++L+N M      P   TYN +ID LC       A  LL 
Sbjct: 416 VNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLN 475

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR------------- 589
                 +    V YT +I+  C + D+ +A+ FFC+M + GFE  +R             
Sbjct: 476 KAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 535

Query: 590 --DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
               ++  F +++S G  P +E    M+  + + GD     +    M + G +PD F
Sbjct: 536 KMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSF 592



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 231/475 (48%), Gaps = 8/475 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           +S  G +++AV ++  M+   L  S  T N +L     +   D   +++D++ V     +
Sbjct: 180 FSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPD 239

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +  +++ G  +  ++Q+A  +L     + F P   +   I+S  C+ G    A   F 
Sbjct: 240 SSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFR 299

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+  G  P+  ++  LI GLC  GS+++A E   +M R+G +P+  T++ L  G     
Sbjct: 300 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 359

Query: 183 QISGAWKVIQKLLIKGSD---PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               A+++  KL+   SD   P++ TYT +I GYC+   +     L   M  QG   NV 
Sbjct: 360 WTEKAFRLFLKLV--RSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 417

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L++  CK+G  D A  L+  M+  G +P++ TY+ +I  LCK+ +  +A +L N+ 
Sbjct: 418 TYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKA 477

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            S  +  +   +  ++   C++  I +A  +F  +  +    D+ L NI+I  + +   +
Sbjct: 478 FSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKM 537

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            E+ +L++ ++   + P+  T+ S+I G+CK G    A +    +K HG  P + TY + 
Sbjct: 538 KESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSL 597

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           ++  C++  +     L + M  + + P  VT   +    CK+     A+ +LE +
Sbjct: 598 ISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPL 652



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 215/441 (48%), Gaps = 8/441 (1%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVYT 65
            G+V+ A++   KM +L  K ++  + SL+  L +   I   +++ +++  +    NVYT
Sbjct: 288 NGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYT 347

Query: 66  NSIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           ++ +IDGLC++   + A  LFL+      + P+V +  +++  YCK      A+ LF  M
Sbjct: 348 HTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM 407

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + GL P+  +Y  LI+G C AG+ + A E  N M   G  P+  TY+ +       S+ 
Sbjct: 408 KEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRA 467

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A++++ K    G + D VTYT+LI   C+  ++++ L     M   GF+ ++   ++L
Sbjct: 468 PEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNIL 527

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +++ C+  ++ E+  L   + ++GL P   TY+ +I G CK+     A++ ++ M     
Sbjct: 528 IAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGC 587

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+SF +G+++ GLC+K M+ EA   ++++I        V    +   Y K  +   A+ 
Sbjct: 588 VPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMI 647

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +   L +K     I T  +L+   C   KV  A      +         VT   F  A C
Sbjct: 648 VLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTA-C 703

Query: 425 EEGNIQRLLALLQEMETKAIG 445
            E     L+A L E  ++ +G
Sbjct: 704 SESGKNNLVADLTERISRGVG 724


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 230/444 (51%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           +  DA+            PS++    ++S   K+   +V   LF  M   G+ P   + N
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           I++H +C++     A  F   M + G EPD +T++ L  G+   ++I  A  +  ++L  
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  P++VTYT LI   C+  ++   ++L   M + G + NV+ Y+ L++ +C+ GR  +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
             LL +M    ++P+++T++ LI    K  K+ +A +LYN M    + P+ F +G+++ G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC   ++ EAR  F  +  + C  + V+Y  +I G+ K   + + ++++ ++ +K +  +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            +T+  LI G+C  G+   A+ + + +      P   TY   ++  C  G +++ L + +
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            M  + +    VTYT++I+G+CK  K+++A  L   ++  G+ P+ ITY T+I  FC+  
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482

Query: 498 DLRKAFQLLNQMWLHNLEPTSATY 521
            + +A  L  +M      P  + Y
Sbjct: 483 LIHEADSLFKKMKEDGFLPNESVY 506



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 220/453 (48%), Gaps = 16/453 (3%)

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
           IL  G H L Q + A  +  +++     P I+ +T L+    ++   +  + L E M   
Sbjct: 54  ILRNGLHNL-QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G    +   ++++  +C S +   A   L +M  +G +PDLVT++ L+ G C  +++  A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           I L++++      PN   +  ++  LC+   +  A   F+ +  +    +VV YN ++ G
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
             ++G  G+A  L R ++++RI P+++TF +LI  F K GK+ +A+ L + +    + P 
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             TY + +N  C  G +     +   ME     P  V YT +I G CK  ++++ +++  
Sbjct: 293 VFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFY 352

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +M   GV  + ITY  +I+ +C       A ++ NQM      P   TYN+L+DGLC NG
Sbjct: 353 EMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            ++ A  +   +++  + +  V YT II+  C  G V  A   FC +  KG + ++  YT
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYT 472

Query: 593 K---------------SFFCMMLSNGFPPDQEI 610
                           S F  M  +GF P++ +
Sbjct: 473 TMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 217/435 (49%)

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
            +AL+    M      P  I ++ L      +++      + +++ I G  P + T  ++
Sbjct: 65  NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           +   C              M+  GF+ +++ ++ LL+  C   RI++A+ L  ++  +G 
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           KP++VTY+ LIR LCK   ++ A++L+N+M +    PN   + A++ GLCE     +A  
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               ++      +V+ +  +ID +VK+G + EA +LY  +I+  + P + T+ SLI G C
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
             G + +AR++   ++ +G  P+ V YTT ++ +C+   ++  + +  EM  K +    +
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TYTV+I+G C   +   A ++   M      PD  TYN ++   C    + KA  +   M
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               ++    TY I+I G+C  G +++A  L  SL    +    + YTT+I   C  G +
Sbjct: 425 RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLI 484

Query: 570 HKAMTFFCQMVEKGF 584
           H+A + F +M E GF
Sbjct: 485 HEADSLFKKMKEDGF 499



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 213/416 (51%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           S++  +   D++  L++ +++   P  + T +IV+  +C  S+   A  FL +     F 
Sbjct: 91  SVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFE 150

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P +V+  ++++ YC     E A  LF  +L  G  P+  +Y  LI  LC    +  A+E 
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            N MG +G  P+ +TY+ L  G   + +   A  +++ ++ +  +P+++T+T LI  + +
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +G + E  +L  VM+      +V  Y  L++ +C  G +DEA  + Y ME  G  P+ V 
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G CK  +V   ++++ EM  K +  N+  +  ++ G C       A+  F+ + 
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D+  YN+++DG    G + +A+ ++  + ++ +  +IVT+  +I G CK GKV 
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           DA  L  ++   G++P+ +TYTT ++ +C  G I    +L ++M+     P    Y
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 181/332 (54%), Gaps = 3/332 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y     + DA+ +  ++  +  K ++ TY +L+  L   RH +   +L++ +  + +  N
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + ++ GLC+  R  DA   L++   +   P+V++  A++  + K+G    AK L+ 
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +M++  ++PD F+Y  LI+GLC+ G ++EA +    M R+G  P+ + Y+ L  GF    
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK 342

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++    K+  ++  KG   + +TYTVLI GYC +G  +   ++   M S+    ++  Y+
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           VLL  +C +G++++AL +   M    +  ++VTY+I+I+G+CK  KV  A  L+  + SK
Sbjct: 403 VLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK 462

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
            + PN   +  ++ G C + +I EA   F  +
Sbjct: 463 GMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 180/425 (42%), Gaps = 28/425 (6%)

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
           A  ++ + KGFHL S          +  ++ S+P     ++ +CG+C             
Sbjct: 6   ATGFASIVKGFHLHSH---------RHRLQISNPRTAA-SLSLCGFC------------- 42

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
               + F     +Y  +L +   + + ++AL L   M      P ++ ++ L+  + K +
Sbjct: 43  -FWIRAFS----SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMN 97

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +    I L+ +M    I P       ++  +C       A  +   ++      D+V + 
Sbjct: 98  RYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFT 157

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +++GY     I +A+ L+ Q++     P++VT+ +LI   CKN  +  A  L + +  +
Sbjct: 158 SLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN 217

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G  P+ VTY   +   CE G       LL++M  + I P  +T+T +I    K  KL EA
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            +L   M  + V PD  TY ++I   C    L +A Q+   M  +   P    Y  LI G
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
            C +  +++   +   + +  +    + YT +I+ +C  G    A   F QM  +     
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397

Query: 588 IRDYT 592
           IR Y 
Sbjct: 398 IRTYN 402



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 20/234 (8%)

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           PS + +T  ++   +      +++L ++M+   I P   T  +V+  +C   +   A   
Sbjct: 81  PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L  M  +G  PD +T+ +++  +C    +  A  L +Q+     +P   TY  LI  LC 
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
           N  L +A  L   +  +      V Y  ++   C  G    A      M+++  E ++  
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           +T                     ++ AF + G L    EL  VMI+  + PD F
Sbjct: 261 FT--------------------ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF 294



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/208 (18%), Positives = 79/208 (37%), Gaps = 15/208 (7%)

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           +Y  +++      +  +A+ L   M      P  I +  ++    K         L  QM
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
            +  + P   T NI++  +C++     A C L  + +       V +T+++  +C    +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCM---------------MLSNGFPPDQEICEVM 614
             A+  F Q++  GF+ ++  YT    C+               M +NG  P+      +
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +    + G  G    L   M+K  + P+
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPN 257


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 210/421 (49%)

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G+E D IT +I+      L  ++  + V+  +   G +P ++T T LI G C  GNV + 
Sbjct: 107 GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQA 166

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           + L + M    + L+V  Y VL++ +CK+G    A+  L +ME    KP++V YS ++ G
Sbjct: 167 VGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDG 226

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           LCK   V +A+ L +EM  K + PN   +  ++ GLC      E     D +I      D
Sbjct: 227 LCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLD 286

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           +   NI++D + K G + +A  +   +I     P + T+NSLI+ +C   K+ +A R+  
Sbjct: 287 LQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFH 346

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G  P  V +T+ ++ +C++ NI +++ LL+EM      P  VT+T +I G C+  
Sbjct: 347 LMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAG 406

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           +   A +L  +M+  G  P+  T   I+   CK   L +A  L   M   NL+     Y+
Sbjct: 407 RPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYS 466

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           IL+DG+C  G L  A  L  SL    + +    YT +IK  C +G + KA      M E 
Sbjct: 467 ILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEEN 526

Query: 583 G 583
           G
Sbjct: 527 G 527



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/569 (25%), Positives = 263/569 (46%), Gaps = 8/569 (1%)

Query: 22  MKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQ- 80
           M      +SI++ +  L+  +H     + YD    +++  N     I +  LC+  +++ 
Sbjct: 1   MGTFSRSLSIRSPSFSLFFSKHCHCSTNTYD----TDSHSNGTQFLISMRNLCKSGKVKN 56

Query: 81  --DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC-LMLKYGLHPDAFSYN 137
             +A+   Q  A  +  PSV     ++    +L     A  L   +    G+  D  + N
Sbjct: 57  IDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTITLN 116

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           I+I+ LC    +         M + G+EP  +T + L  G  +   ++ A  ++  +   
Sbjct: 117 IVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKM 176

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
               D+ TY VLI G C+ G+    ++    M  + +K NV+ YS ++  +CK G + EA
Sbjct: 177 RYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEA 236

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L L  EM   G++P+LVTY+ LI+GLC   +  +   L +EM    +  +      ++  
Sbjct: 237 LNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDA 296

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
            C++  + +A+     +I++    DV  YN +I  Y     + EA++++  ++ +   P 
Sbjct: 297 FCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPD 356

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           IV F SLI+G+CK+  +     LL+ +   G  P  VT+TT +  +C+ G       L  
Sbjct: 357 IVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFL 416

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
            M      P   T  V++ GLCK   L EAV L E M    +  + + Y+ ++   C   
Sbjct: 417 NMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAG 476

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
            L  A++L + +    L+    TY I+I GLC  G L  A+ LL++++E+        Y 
Sbjct: 477 KLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYN 536

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
             ++    + ++ +++ +   M +KGF +
Sbjct: 537 VFVQGLLTKKEIARSIKYLTIMRDKGFSV 565



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 229/480 (47%), Gaps = 1/480 (0%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
            ++LN +++  C+L        +   M K GL P   +   LI+GLC+ G++ +A+   +
Sbjct: 112 TITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVD 171

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            M +     D  TY +L  G         A + ++K+  +   P++V Y+ ++ G C+ G
Sbjct: 172 HMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDG 231

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
            V E L L   M  +G + N++ Y+ L+  +C  GR  E   LL EM  +G++ DL T +
Sbjct: 232 LVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLN 291

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           IL+   CK+ KV +A  +   M      P+ F + +++   C +  + EA   F  ++  
Sbjct: 292 ILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSR 351

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
            C+ D+V++  +I G+ K  NI + + L  ++ +    P +VT+ +LI GFC+ G+   A
Sbjct: 352 GCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAA 411

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
           + L   +  +G  P+  T    ++  C+   +   ++L + ME   +    V Y++++ G
Sbjct: 412 KELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDG 471

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           +C   KL  A +L   +   G+  +  TY  +I+  CK   L KA  LL  M  +   P 
Sbjct: 472 MCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPD 531

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISL-TKVAYTTIIKAHCAEGDVHKAMTFF 576
           + TYN+ + GL    ++  +   L  +++   S+       TI      EGD      FF
Sbjct: 532 NCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLSTNEGDTRIREFFF 591



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 219/451 (48%), Gaps = 3/451 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R  +V     V+  M +L L+ ++ T  +L+  L    +      L D ++    P +VY
Sbjct: 124 RLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVY 183

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T  ++I+GLC+      A+ +L++   + + P+VV  + IM   CK G    A  L   M
Sbjct: 184 TYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEM 243

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G+ P+  +Y  LI GLC  G  +E     ++M + G+  D  T +IL   F    ++
Sbjct: 244 SGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKV 303

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  VI  +++ G  PD+ TY  LI  YC    + E +++  +M+S+G   +++ ++ L
Sbjct: 304 MQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSL 363

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   CK   I++ + LL EM  +G  PD+VT++ LI G C+  +   A +L+  M     
Sbjct: 364 IHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQ 423

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN      IL GLC+  +++EA    +++  SN   ++V+Y+I++DG    G +  A +
Sbjct: 424 VPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWE 483

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L+  L  K +  ++ T+  +I G CK G +  A  LL  ++ +G  P   TY  F+    
Sbjct: 484 LFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLL 543

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            +  I R +  L  M  K       T  + I
Sbjct: 544 TKKEIARSIKYLTIMRDKGFSVDAATTEITI 574



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 217/483 (44%), Gaps = 56/483 (11%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
           P +  +T+L+    ++ +    + L + +  S G + + I  +++++ +C+   +     
Sbjct: 74  PSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFS 133

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           +L  M  +GL+P ++T + LI GLC Q  V +A+ L + M   R   + + +G ++ GLC
Sbjct: 134 VLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLC 193

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           +      A  +   +   N   +VV+Y+ ++DG  K G + EA+ L  ++  K + P++V
Sbjct: 194 KTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLV 253

Query: 380 TFNSLIYG-----------------------------------FCKNGKVADARRLLDTI 404
           T+  LI G                                   FCK GKV  A+ ++  +
Sbjct: 254 TYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFM 313

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
            L G  P   TY + ++ YC +  +   + +   M ++   P  V +T +I G CK   +
Sbjct: 314 ILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNI 373

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            + + LLE+M  +G  PD +T+ T+I  FC+      A +L   M  +   P   T  ++
Sbjct: 374 NKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVI 433

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +DGLC    L  A  L  ++++ N+ L  V Y+ ++   C+ G ++ A   F  +  KG 
Sbjct: 434 LDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGL 493

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           +I++  YT                    +M+    + G L    +L   M ++G LPD  
Sbjct: 494 QINVYTYT--------------------IMIKGLCKQGSLDKAEDLLINMEENGCLPDNC 533

Query: 645 LIN 647
             N
Sbjct: 534 TYN 536


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 157/603 (26%), Positives = 270/603 (44%), Gaps = 32/603 (5%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           R G+ + A+  + ++K+L  K S  TYN+L+         D  + ++ ++  S    + Y
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY 268

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T    +  LC+  R ++A+  +++   +EF    V    ++S  C+    E A      M
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
                 P+  +Y IL+ G      +       + M   G  P    ++ L   +      
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN--------VEEGLKLREVMLSQGFKL 236
           S A+K+++K+   G  P  V Y +LI G C  GN        +E   K    ML     L
Sbjct: 386 SYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSLDVLELAEKAYGEMLDAHVVL 443

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N +  S L   +C +G+ ++A  ++ EM + G  PD  TYS +I  LC   KV  A  L+
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM S  + P+ F +  ++   C+  ++ +AR +FD ++   C  +VV Y  +I  Y+K 
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-------- 408
             +  A +L+  ++ +   P++VT+ +LI G CK+G++  A ++   ++ +         
Sbjct: 564 RKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY 623

Query: 409 --------LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
                    +P+  TY   ++  C+   ++    LL  M  +   P H+ Y  +I G CK
Sbjct: 624 FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             KL EA  +   M   G  P+  TY+++I    K K L  A ++L++M  ++  P    
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y  +IDGLC  G    A  L+  ++E       V YT +I      G V K +    QM 
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803

Query: 581 EKG 583
            KG
Sbjct: 804 AKG 806



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 174/693 (25%), Positives = 299/693 (43%), Gaps = 79/693 (11%)

Query: 8   RTGMVHDAVFVIAKMK-ELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           + G   +A+ +I K + +LD  +  Q  + L       + M D    ++ S    NV T 
Sbjct: 279 KAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAM-DFLSRMRSSSCIPNVVTY 337

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
            I++ G  ++ +L      L     +   PS    N+++  YC+ G    A  L   M  
Sbjct: 338 RILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGD 397

Query: 127 YGLHPDAFSYNILIHG-----------------------------------------LCI 145
            G  P    YNILI G                                         LC 
Sbjct: 398 CGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCG 457

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
           AG  E+A     +M   G  PD  TYS +       S++  A+ + +++      PD+ T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           YT+LI  +C++G +++  K  + M+  G   NV+ Y+ L+ +  K+ ++  A  L   M 
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR----------------ISPNSF 309
           + G  P++VTY+ LI G CK  ++ KA Q+Y  M                      PN F
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            +GA++ GLC+   + EAR   D + +  C  + ++Y+ +IDG+ K+G + EA  ++ ++
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            E+   P++ T++SLI    K+ ++  A ++L  +  +   P+ + YT  ++  C+ G  
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
                L+  ME K   P  VTYT +I G  K  K+ + ++L+  M   G  P+ +TY  +
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I   C    L  A QLL++M         A Y  +I+G   N +   +  LL  + E+  
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVA 875

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
                AY  +I + C  G +  A+    +M       S   Y+ +            D++
Sbjct: 876 VPIIPAYRILIDSFCKAGRLELALELHKEMS------SCTSYSAA------------DKD 917

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +   ++ +      +   FEL A MIK G +P+
Sbjct: 918 LYSSLIESLSLASKVDKAFELYADMIKRGGIPE 950



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 234/525 (44%), Gaps = 26/525 (4%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
            G    A  +I +M          TY+    LL N    D  + L++++K +    +V+T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            +I+ID  C+   LQ A  +  E       P+VV+  A++  Y K      A  LF +ML
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G  P+  +Y  LI G C +G +E+A +    M  +   PD   Y  +  G        
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG-------- 629

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
                         DP+I TY  L+ G C+   V+E   L +VM  +G + N I Y  L+
Sbjct: 630 -----------NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALI 678

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              CK G++DEA  +  +M   G  P++ TYS LI  L K  ++  A+++ + M     +
Sbjct: 679 DGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCA 738

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN   +  ++ GLC+     EA      +    C  +VV Y  MIDG+ K G + + ++L
Sbjct: 739 PNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLEL 798

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
            RQ+  K  +P+ VT+  LI   C  G + DA +LLD +K          Y   +  +  
Sbjct: 799 MRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR 858

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG--VTPDQ 483
           E  I   L LL E+      P    Y ++I   CK  +L+ A++L ++M         D+
Sbjct: 859 EFIIS--LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADK 916

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
             Y+++I S      + KAF+L   M      P  + +  L+ GL
Sbjct: 917 DLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGL 961



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 189/423 (44%), Gaps = 26/423 (6%)

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+   C++G  + AL  L  ++ +G KP  +TY+ L+R   + D++  A  ++ EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIG 360
              + + +  G  +  LC+     EA     +LI     + D V+Y  MI G  +     
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREAL----ALIEKEEFKLDTVIYTQMISGLCEASLFE 316

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+    ++      P++VT+  L+ G  +  ++   +R+L  +   G  PS   + + +
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ--EAVQLLE----DM 474
           +AYC  G+      LL++M      P +V Y ++I G+C   KL   + ++L E    +M
Sbjct: 377 HAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEM 436

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
               V  +++  + + R  C      KA+ ++ +M      P ++TY+ +I  LC    +
Sbjct: 437 LDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKV 496

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-- 592
            NA  L   ++ +++      YT +I + C  G + +A  +F +MV  G   ++  YT  
Sbjct: 497 DNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTAL 556

Query: 593 -------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                           F MMLS G  P+      ++    + G +    ++ A M  +  
Sbjct: 557 IHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNAD 616

Query: 640 LPD 642
           +PD
Sbjct: 617 IPD 619



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 189/387 (48%), Gaps = 11/387 (2%)

Query: 23  KELDLKVSIQTYNSLLYNLRHTDI-MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQD 81
           K   ++ + Q Y  +  N    D+ M+   DD  + +   N++T   ++DGLC+  ++++
Sbjct: 597 KSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP--NIFTYGALVDGLCKAHKVKE 654

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           A   L   + +   P+ +  +A++  +CK+G  + A+ +F  M + G  P+ ++Y+ LI 
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
            L     ++ AL+  + M  +   P+ I Y+ +  G   + +   A++++  +  KG  P
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           ++VTYT +I G+ + G V++ L+L   M ++G   N + Y VL++  C +G +D+A  LL
Sbjct: 775 NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            EM+       +  Y  +I G  ++  +  ++ L +E+      P   A+  ++   C+ 
Sbjct: 835 DEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKA 892

Query: 322 EMITEARMYFDSLIMSNCIQ----DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
             +  A        MS+C      D  LY+ +I+       + +A +LY  +I++   P 
Sbjct: 893 GRLELALELHKE--MSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPE 950

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTI 404
           +  F  L+ G  +  +  +A +L D I
Sbjct: 951 LSIFFYLVKGLIRINRWEEALQLSDCI 977



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 133/305 (43%), Gaps = 29/305 (9%)

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN ++  +++   +  A  ++R++ +   +    T    ++  CK G+  +A   L  I+
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA---LALIE 291

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
               +   V YT  ++  CE    +  +  L  M + +  P  VTY +++ G  ++ +L 
Sbjct: 292 KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
              ++L  M   G  P +  +N++I ++C+  D   A++LL +M     +P    YNILI
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411

Query: 526 DGLCVNGDLKNADCLLVS------LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            G+C N  L + D L ++      + + ++ L KV  + + +  C  G   KA +     
Sbjct: 412 GGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSI---- 467

Query: 580 VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                   IR+        M+S GF PD      ++        + + F L   M  + +
Sbjct: 468 --------IRE--------MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV 511

Query: 640 LPDKF 644
           +PD F
Sbjct: 512 VPDVF 516



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 135/322 (41%), Gaps = 70/322 (21%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL D + V     N      +IDG C+  +L +A +   + + + +GP+V + ++++ R 
Sbjct: 657 DLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRL 716

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
            K    ++A  +   ML+    P+   Y  +I GLC  G  +EA    + M   G  P+ 
Sbjct: 717 FKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNV 776

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +TY+ +  GF    ++    ++++++  KG  P+ VTY VLI   C  G +++  +L + 
Sbjct: 777 VTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836

Query: 229 M--------------LSQGFKLNVI-------------------AYSVLLSSMCKSGRID 255
           M              + +GF    I                   AY +L+ S CK+GR++
Sbjct: 837 MKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896

Query: 256 EALGLLYEMEAV-------------------------------------GLKPDLVTYSI 278
            AL L  EM +                                      G  P+L  +  
Sbjct: 897 LALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFY 956

Query: 279 LIRGLCKQDKVHKAIQLYNEMC 300
           L++GL + ++  +A+QL + +C
Sbjct: 957 LVKGLIRINRWEEALQLSDCIC 978



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 143/351 (40%), Gaps = 53/351 (15%)

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY------------------ 386
           L N++I    + G    A++   +L +    PS +T+N+L+                   
Sbjct: 199 LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREM 258

Query: 387 ---GFCKNG-----------KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              GF  +G           K    R  L  I+    +   V YT  ++  CE    +  
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEA 318

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           +  L  M + +  P  VTY +++ G  ++ +L    ++L  M   G  P +  +N++I +
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS------LQE 546
           +C+  D   A++LL +M     +P    YNILI G+C N  L + D L ++      + +
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLD 438

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS------------ 594
            ++ L KV  + + +  C  G   KA +   +M+ KGF      Y+K             
Sbjct: 439 AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDN 498

Query: 595 ---FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
               F  M SN   PD     +++ +F + G L    +    M++ G  P+
Sbjct: 499 AFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 18/211 (8%)

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            V+I+  C+      A++ L  +  +G  P ++TYN ++R F +   L  A+ +  +M  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
                   T    +  LC  G  + A   L  +++    L  V YT +I   C      +
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREA---LALIEKEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 572 AMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLI 616
           AM F  +M       ++  Y                K    MM++ G  P + I   ++ 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           A+ + GD    ++L   M   G  P   + N
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYN 408


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 225/437 (51%), Gaps = 4/437 (0%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKE--FGPSVVSLNAIMSRYCKLGFAEVAK 118
           R V + + V++ + Q+     A+ F +   G +    P+V+S N ++   CKLG  + A 
Sbjct: 133 RTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAI 192

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M      PD F+Y  L+ GLC    ++EA+   ++M   G  P ++T+++L  G 
Sbjct: 193 EVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGL 252

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +    K++  + +KG  P+ VTY  +I G C  G +++ + L + M++     N 
Sbjct: 253 CKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPND 312

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y  L++ + K GR  + + LL  +E  G   +   YS LI GL K++K  +A+ L+ +
Sbjct: 313 VTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKK 372

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  K   PN   + A++ GLC +  + EA+     ++   C  +   Y+ +I G+ K GN
Sbjct: 373 MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGN 432

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             +A+++++++ +    P+ + ++ LI+G C++GK+ +A  +   +   GL P  V Y++
Sbjct: 433 SQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSS 492

Query: 419 FMNAYCEEGNIQRLLALLQEM--ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            ++  C  G+++  L L  EM  +     P  VTY ++++ LCKQ  +  A+ LL  M  
Sbjct: 493 MIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLD 552

Query: 477 IGVTPDQITYNTIIRSF 493
            G  PD IT N  + + 
Sbjct: 553 RGCNPDLITCNIFLNAL 569



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 232/469 (49%), Gaps = 21/469 (4%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D   +++ ++ + +   +V+T   ++DGLC++ R+ +A+L L E   +   PS V+ N +
Sbjct: 189 DRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVL 248

Query: 105 MSRYCKLG-FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           ++  CK G    V K +  + LK G  P+  +YN +I+GLC+ G +++A+   + M    
Sbjct: 249 INGLCKKGDMVRVTKLVDNMFLK-GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASK 307

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
             P+ +TY  L  G     +      ++  L  +G   +   Y+ LI G  +    EE +
Sbjct: 308 CVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAM 367

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
            L + M+ +G + N++ YS L+  +C+ G++DEA  +L EM   G  P+  TYS LI+G 
Sbjct: 368 GLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGF 427

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
            K     KAI+++ EM      PN   +  ++ GLCE   + EA M +  ++      DV
Sbjct: 428 FKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDV 487

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLI--EKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           V Y+ MI G    G++   ++L+ +++  E    P +VT+N L+   CK   ++ A  LL
Sbjct: 488 VAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLL 547

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           +++   G  P  +T   F+N            AL +++     G   +   VV   L K+
Sbjct: 548 NSMLDRGCNPDLITCNIFLN------------ALREKLNPPQDGREFLDELVV--RLHKR 593

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
            ++  A +++E M    + P+  T+  II   CK K   K   ++++ W
Sbjct: 594 QRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPK---KVQAIIDKCW 639



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 189/344 (54%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NV+++++++ +MCK G +D A+ +  EM     +PD+ TY  L+ GLCK+D++ +A+ L 
Sbjct: 171 NVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLL 230

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           +EM  +   P+S     ++ GLC+K  +       D++ +  C+ + V YN +I+G    
Sbjct: 231 DEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLK 290

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G + +AV L  +++  +  P+ VT+ +LI G  K G+  D   LL +++  G   +   Y
Sbjct: 291 GKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAY 350

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           +T ++   +E   +  + L ++M  K   P  V Y+ +I GLC++ KL EA ++L +M  
Sbjct: 351 STLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVN 410

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G TP+  TY+++I+ F K  + +KA ++  +M  +N  P    Y++LI GLC +G L+ 
Sbjct: 411 KGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLRE 470

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           A  +   +    +    VAY+++I   C  G V   +  F +M+
Sbjct: 471 AMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 514



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 217/447 (48%), Gaps = 7/447 (1%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P+++++ ++I   C++G V+  +++   M  Q  + +V  Y  L+  +CK  RIDEA+ L
Sbjct: 170 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 229

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L EM+  G  P  VT+++LI GLCK+  + +  +L + M  K   PN   +  I+ GLC 
Sbjct: 230 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 289

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
           K  + +A    D ++ S C+ + V Y  +I+G VK G   + V L   L E+    +   
Sbjct: 290 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 349

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +++LI G  K  K  +A  L   +   G +P+ V Y+  ++  C EG +     +L EM 
Sbjct: 350 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 409

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            K   P   TY+ +IKG  K    Q+A+++ ++M      P++I Y+ +I   C+   LR
Sbjct: 410 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 469

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL--QEHNISLTKVAYTT 558
           +A  +   M    L P    Y+ +I GLC  G ++    L   +  QE +     V Y  
Sbjct: 470 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 529

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ---EICEVML 615
           +++A C +  +  A+     M+++G    +   T + F   L     P Q   E  + ++
Sbjct: 530 LLRALCKQNSISHAIDLLNSMLDRGCNPDL--ITCNIFLNALREKLNPPQDGREFLDELV 587

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +  H+   +    ++  VM++  L P+
Sbjct: 588 VRLHKRQRIVGAAKIIEVMLQKFLPPN 614



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 208/427 (48%), Gaps = 19/427 (4%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMW--DLYDDIKVSETPRNVYTNSI 68
           + +AV ++ +M+      S  T+N L+  L +  D++    L D++ +     N  T + 
Sbjct: 223 IDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 282

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+GLC + +L  A+  L      +  P+ V+   +++   K G +     L   + + G
Sbjct: 283 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 342

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
            H + ++Y+ LI GL      EEA+     M   G +P+ + YS L  G     ++  A 
Sbjct: 343 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 402

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +++ +++ KG  P+  TY+ LI G+ + GN ++ +++ + M       N I YSVL+  +
Sbjct: 403 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 462

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM-CSKRIS-P 306
           C+ G++ EA+ +   M   GL+PD+V YS +I GLC    V   ++L+NEM C +  S P
Sbjct: 463 CEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 522

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +  +L  LC++  I+ A    +S++   C  D++  NI ++   +  N     Q  
Sbjct: 523 DVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLN---PPQDG 579

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           R+ +++           L+    K  ++  A ++++ +    L P+A T+   +   C+ 
Sbjct: 580 REFLDE-----------LVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKP 628

Query: 427 GNIQRLL 433
             +Q ++
Sbjct: 629 KKVQAII 635


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 248/518 (47%), Gaps = 32/518 (6%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           +++LI      G  E+AL  + +M      PD+     +  G     +    W   Q ++
Sbjct: 169 FSLLIMEFLEMGLFEDALWVSREMR---CSPDSKACLAILNGLVRRRRFDSVWVDYQLMI 225

Query: 196 IKGSDPDIVTYTVLI-CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
            +G  PD+  Y+VL  C + Q G   +  KL + M S G K NV  Y++ +  +C+  ++
Sbjct: 226 SRGLVPDVHIYSVLFQCCFKQ-GFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKM 284

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           +EA  +   M+  G+ P+L TYS +I G CK   + +A  LY E+    + PN    G +
Sbjct: 285 EEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTL 344

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G C+   +  AR  F  ++      ++ +YN +I G  K GN+ EA+ L  ++    +
Sbjct: 345 VDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNL 404

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
           SP + T+  LI G C   ++A+A RL   +K   + PS+VTY + ++ +C+E NI++ L 
Sbjct: 405 SPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALD 464

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L  EM +  + P  +T++ +I G CK   ++ A+ L  +M + G+ PD +TY T+I +  
Sbjct: 465 LCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHF 524

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK- 553
           K  ++++A +L + M    + P   T+  L+DG    G L  +D +   L+ +  +  K 
Sbjct: 525 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL--SDAIDFYLENNQAATGKS 582

Query: 554 ---------VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY------------- 591
                    V +T +I+  C  G + +A  FF  M   G    I  Y             
Sbjct: 583 IVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRI 642

Query: 592 --TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
             T    C M+  G  P+  + +++ + + + G L S 
Sbjct: 643 TDTMMLHCDMIKTGILPNLMVNQLLAMFYQENGYLRSA 680



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 247/489 (50%), Gaps = 21/489 (4%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +++GL ++ R     +  Q    +   P V   + +     K GF    + L   M   G
Sbjct: 204 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLG 263

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + P+ + Y I I  LC    MEEA +    M  HGV P+  TYS +  G+     +  A+
Sbjct: 264 VKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAY 323

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            + +++L+    P++V +  L+ G+C+   +     L   M+  G   N+  Y+ L+   
Sbjct: 324 GLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQ 383

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CKSG + EA+GLL EME++ L PD+ TY+ILI GLC ++++ +A +L+  M ++RI P+S
Sbjct: 384 CKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSS 443

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             + +++ G C++  I +A      +  S    +++ ++ +IDGY K+ NI  A+ LY +
Sbjct: 444 VTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFE 503

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  K I P +VT+ +LI    K   + +A RL   +   G+ P+  T+   ++ + +EG 
Sbjct: 504 MTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 563

Query: 429 IQRLLALLQEMETKAIGPT--------HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +   +    E    A G +        +V +T +I+GLC+   +  A +   DM   GVT
Sbjct: 564 LSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVT 623

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH-NLEPTSATYNILIDGLCV-----NGDL 534
           PD  +Y +++++  + K      ++ + M LH ++  T    N++++ L       NG L
Sbjct: 624 PDIWSYVSMLKAHLREK------RITDTMMLHCDMIKTGILPNLMVNQLLAMFYQENGYL 677

Query: 535 KNADCLLVS 543
           ++A C L +
Sbjct: 678 RSA-CFLTN 685



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 215/410 (52%), Gaps = 11/410 (2%)

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           I+     I  +++LI  + ++G  E+ L + RE+  S   K    A   +L+ + +  R 
Sbjct: 159 IQSPKFSIGVFSLLIMEFLEMGLFEDALWVSREMRCSPDSK----ACLAILNGLVRRRRF 214

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           D        M + GL PD+  YS+L +   KQ    K  +L +EM S  + PN + +   
Sbjct: 215 DSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIY 274

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           +  LC +  + EA   F+ + +   + ++  Y+ MIDGY K GN+ +A  LY++++   +
Sbjct: 275 IRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAEL 334

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P++V F +L+ GFCK  ++  AR L   +   G++P+   Y   ++  C+ GN+   + 
Sbjct: 335 LPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMG 394

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           LL EME+  + P   TYT++I GLC + +L EA +L + M    + P  +TYN++I  FC
Sbjct: 395 LLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFC 454

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K  ++ KA  L ++M    +EP   T++ LIDG C   ++K A  L   +    I    V
Sbjct: 455 KEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVV 514

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
            YTT+I AH  E ++ +A+  +  M+E G  I   D+T  F C++  +GF
Sbjct: 515 TYTTLIDAHFKEANMKEALRLYSDMLEAG--IHPNDHT--FACLV--DGF 558



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 221/439 (50%), Gaps = 23/439 (5%)

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           ++M+S+G   +V  YSVL     K G   +   LL EM ++G+KP++  Y+I IR LC++
Sbjct: 222 QLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRE 281

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
           +K+ +A +++  M    + PN + + A++ G C+   + +A   +  ++++  + +VV++
Sbjct: 282 NKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVF 341

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
             ++DG+ K   +  A  L+  +++  + P++  +N LI+G CK+G + +A  LL  ++ 
Sbjct: 342 GTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMES 401

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
             L P   TYT  +N  C E  +     L Q M+ + I P+ VTY  +I G CK++ +++
Sbjct: 402 LNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEK 461

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A+ L  +M   GV P+ IT++T+I  +CK ++++ A  L  +M +  + P   TY  LID
Sbjct: 462 ALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLID 521

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ-------- 578
                 ++K A  L   + E  I      +  ++     EG +  A+ F+ +        
Sbjct: 522 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGK 581

Query: 579 -MVEK------GFEISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
            +V++      GF   I    ++        FF  M S G  PD      ML A  +   
Sbjct: 582 SIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKR 641

Query: 624 LGSVFELAAVMIKSGLLPD 642
           +     L   MIK+G+LP+
Sbjct: 642 ITDTMMLHCDMIKTGILPN 660



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 208/440 (47%), Gaps = 46/440 (10%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLC 74
           ++ +M  L +K ++  Y   + +L   + M +   +++ +K+     N+YT S +IDG C
Sbjct: 255 LLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYC 314

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +   L+ A    +E    E  P+VV    ++  +CK      A+ LF  M+K+G+ P+ +
Sbjct: 315 KTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLY 374

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
            YN LIHG C +G+M EA+   ++M    + PD  TY+IL  G     +++ A ++ Q++
Sbjct: 375 VYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRM 434

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             +   P  VTY  LI G+C+  N+E+ L L   M S G + N+I +S L+   CK   I
Sbjct: 435 KNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNI 494

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
             A+GL +EM   G+ PD+VTY+ LI    K+  + +A++LY++M    I PN       
Sbjct: 495 KAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHT---- 550

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
                                          +  ++DG+ K G + +A+  Y +  +   
Sbjct: 551 -------------------------------FACLVDGFWKEGRLSDAIDFYLENNQAAT 579

Query: 375 SPSIVT--------FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             SIV         F  LI G C+NG +  A R    +K  G+ P   +Y + + A+  E
Sbjct: 580 GKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLRE 639

Query: 427 GNIQRLLALLQEMETKAIGP 446
             I   + L  +M    I P
Sbjct: 640 KRITDTMMLHCDMIKTGILP 659


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 207/387 (53%)

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G+  +  T +IL   F   SQ+S A   + K++  G +P IVT+  L+ G+C+   V + 
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           L + + M+  G+K NV+ Y+ ++  +CKS ++D AL LL  ME  G+ PD+VTY+ LI G
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           LC   +   A ++ + M  + I P+ F   A++    ++  ++EA  +++ +I  +   D
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           +V Y+++I G      + EA +++  ++ K   P +VT++ LI G+CK+ KV    +L  
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   G+  + VTYT  +  YC  G +     + + M    + P  +TY V++ GLC   
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           K+++A+ +L DM   G+  D +TYN IIR  CK  ++  A+ +   +    L P   TY 
Sbjct: 411 KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYT 470

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNI 549
            ++ GL   G  + AD L   ++E  I
Sbjct: 471 TMMLGLYKKGLRREADALFRKMKEDGI 497



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 199/396 (50%), Gaps = 3/396 (0%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W+ +Q L   G   ++ T  +L+  +C+   +   L     M+  G + +++ +  LL+ 
Sbjct: 104 WEQMQML---GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            C+  R+ +AL +  +M  +G KP++V Y+ +I GLCK  +V  A+ L N M    I P+
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              + +++ GLC     ++A      +       DV  +N +ID  VK G + EA + Y 
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++I + + P IVT++ LIYG C   ++ +A  +   +   G  P  VTY+  +N YC+  
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            ++  + L  EM  + +    VTYT++I+G C+  KL  A ++   M   GV P+ ITYN
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++   C    + KA  +L  M  + ++    TYNI+I G+C  G++ +A  +  SL   
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +      YTT++     +G   +A   F +M E G
Sbjct: 461 GLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 212/422 (50%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+   + ++S   K+   +V   L+  M   G+  +  + NIL++  C    +  AL F
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + G EP  +T+  L  GF    ++  A  +  +++  G  P++V Y  +I G C+
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              V+  L L   M   G   +V+ Y+ L+S +C SGR  +A  ++  M    + PD+ T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ LI    K+ +V +A + Y EM  + + P+   +  ++ GLC    + EA   F  ++
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C  DVV Y+I+I+GY K   +   ++L+ ++ ++ +  + VT+  LI G+C+ GK+ 
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  +   +   G+ P+ +TY   ++  C+ G I++ L +L +M+   +    VTY ++I
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           +G+CK  ++ +A  +   +   G+ PD  TY T++    K    R+A  L  +M    + 
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498

Query: 516 PT 517
           P 
Sbjct: 499 PN 500



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 228/470 (48%), Gaps = 35/470 (7%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGL 73
           D  F + + + L          S +  ++  D++  L++ +++   P N+ T +I+++  
Sbjct: 67  DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDA 133
           C+ S+L  A+ FL +       PS+V+  ++++ +C+      A  +F  M+  G  P+ 
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
             YN +I GLC +  ++ AL+  N M + G+ PD +TY+ L  G     + S A +++  
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +  +   PD+ T+  LI    + G V E  +  E M+ +    +++ YS+L+  +C   R
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +DEA  +   M + G  PD+VTYSILI G CK  KV   ++L+ EM  + +  N+     
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT----- 361

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
                                         V Y I+I GY + G +  A +++R+++   
Sbjct: 362 ------------------------------VTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           + P+I+T+N L++G C NGK+  A  +L  ++ +G++   VTY   +   C+ G +    
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
            +   +  + + P   TYT ++ GL K+   +EA  L   M   G+ P++
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 194/392 (49%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P I  ++ L+    ++   +  + L E M   G   N+   ++LL+  C+  ++  AL  
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L +M  +G +P +VT+  L+ G C+ D+V+ A+ ++++M      PN   +  I+ GLC+
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
            + +  A    + +       DVV YN +I G    G   +A ++   + ++ I P + T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           FN+LI    K G+V++A    + +    L+P  VTY+  +   C    +     +   M 
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
           +K   P  VTY+++I G CK  K++  ++L  +M   GV  + +TY  +I+ +C+   L 
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
            A ++  +M    + P   TYN+L+ GLC NG ++ A  +L  +Q++ +    V Y  II
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438

Query: 561 KAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +  C  G+V  A   +C +  +G    I  YT
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYT 470



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 186/372 (50%), Gaps = 32/372 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           + R   V+DA+++  +M  +  K ++  YN+                             
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNT----------------------------- 191

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
              +IDGLC+  ++ +A+  L        GP VV+ N+++S  C  G    A  +   M 
Sbjct: 192 ---IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K  ++PD F++N LI      G + EA EF  +M R  ++PD +TYS+L  G  + S++ 
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A ++   ++ KG  PD+VTY++LI GYC+   VE G+KL   M  +G   N + Y++L+
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              C++G+++ A  +   M   G+ P+++TY++L+ GLC   K+ KA+ +  +M    + 
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
            +   +  I+ G+C+   + +A   + SL     + D+  Y  M+ G  K G   EA  L
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488

Query: 366 YRQLIEKRISPS 377
           +R++ E  I P+
Sbjct: 489 FRKMKEDGILPN 500



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 75/202 (37%), Gaps = 20/202 (9%)

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P+   ++ ++  + K  K    + L E M ++G+  +  T N ++  FC+C  L  A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
           L +M     EP+  T+  L++G C    + +A  +   +         V Y TII   C 
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
              V  A+    +M EK                   +G  PD      ++      G   
Sbjct: 199 SKQVDNALDLLNRM-EK-------------------DGIGPDVVTYNSLISGLCSSGRWS 238

Query: 626 SVFELAAVMIKSGLLPDKFLIN 647
               + + M K  + PD F  N
Sbjct: 239 DATRMVSCMTKREIYPDVFTFN 260


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/616 (23%), Positives = 275/616 (44%), Gaps = 37/616 (6%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           +A  ++  M+    + +   Y +L   L  +  +D M  L++ ++      NV+  + +I
Sbjct: 44  EAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLI 103

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
               ++ R+  A+  L E     F   +V  N  +  + K+G  ++A   F  M   GL 
Sbjct: 104 RVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLV 163

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD  +Y  ++  LC A  ++EA+E    M ++   P A  Y+ +  G+    +   A+ +
Sbjct: 164 PDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSL 223

Query: 191 IQKLLIKGSDPDIV----------------------------------TYTVLICGYCQI 216
           +++   KG  P +V                                  TY ++I   C+ 
Sbjct: 224 LERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKA 283

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           GNVE   K+R+ M   G   NV   ++++  +CK+ ++DEA  +   M+     PD  T+
Sbjct: 284 GNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATF 343

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
             LI GL KQ +V  A ++Y  M      PN   + +++    + +   +    +  ++ 
Sbjct: 344 CSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMR 403

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           S C  D++L N  +D   K G   +   L+ ++  +   P   +++ LI+   K G   +
Sbjct: 404 SGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARE 463

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
              L   +K  G       Y T ++ +C+ G + +   LL+EM+T    PT VTY  V+ 
Sbjct: 464 TYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVD 523

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GL K  +L EA  L E+    G+  +Q+ Y+++I  F K   + +A+ ++ +M    L P
Sbjct: 524 GLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTP 583

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              T+N L+DGL    ++  A     S+++   +  ++ Y  +I   C     +KA  F+
Sbjct: 584 NVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFW 643

Query: 577 CQMVEKGFEISIRDYT 592
            +M ++G + +   YT
Sbjct: 644 QEMQKQGLKPNTITYT 659



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 152/618 (24%), Positives = 275/618 (44%), Gaps = 43/618 (6%)

Query: 42  RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSL 101
           R+ D +  +  ++ ++      YT   ++    +  +L +A   LQ     +F P+  + 
Sbjct: 5   RNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAY 64

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
             ++    ++G ++    LF  M + G   +      LI      G ++ AL   ++M  
Sbjct: 65  TTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKS 124

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT-------------- 207
           +  + D + Y++    F  + ++  AWK   ++   G  PD VTYT              
Sbjct: 125 NTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDE 184

Query: 208 ---------------------VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
                                 +I GY   G  +E   L E   ++G   +V+AY+ +L+
Sbjct: 185 AVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILT 244

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            + K G+ D+AL +  EM+   + P+L TY+I+I  LCK   V  A ++ + M    + P
Sbjct: 245 CLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFP 303

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N      ++  LC+ + + EA   F+ +    C  D   +  +IDG  K G + +A ++Y
Sbjct: 304 NVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIY 363

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++++    P++V + SLI  F K  +  D  ++   +   G  P  +   T+M+   + 
Sbjct: 364 ERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKA 423

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G  ++  AL +E++ +   P   +Y+++I  L K    +E  +L   M   G   D   Y
Sbjct: 424 GETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAY 483

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
           NT+I  FCK   + KA+QLL +M      PT  TY  ++DGL     L  A  L    + 
Sbjct: 484 NTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKS 543

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPP 606
           + I L +V Y+++I      G V +A     +M++KG   ++  YT  + C++  +G   
Sbjct: 544 NGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNV--YT--WNCLL--DGLVK 597

Query: 607 DQEICEVMLIAFHQGGDL 624
            +EI E  L+ F    DL
Sbjct: 598 AEEINEA-LVCFQSMKDL 614



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 214/450 (47%)

Query: 81  DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILI 140
           D  L + E   ++  P++ + N I+   CK G  E A  +   M + GL P+  + NI+I
Sbjct: 253 DKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMI 312

Query: 141 HGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
             LC A  ++EA      M      PD  T+  L  G     ++  A+++ +++L     
Sbjct: 313 DRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQI 372

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P++V YT LI  + +    E+G K+ + M+  G   +++  +  +  + K+G  ++   L
Sbjct: 373 PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRAL 432

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
             E++A G  PD  +YSILI  L K     +  +LY  M  +    ++ A+  ++ G C+
Sbjct: 433 FEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCK 492

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
              + +A    + +        VV Y  ++DG  K+  + EA  L+ +     I  + V 
Sbjct: 493 SGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVI 552

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           ++SLI GF K G+V +A  +++ +   GL P+  T+   ++   +   I   L   Q M+
Sbjct: 553 YSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMK 612

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
                P  +TY ++I GLCK  K  +A    ++M   G+ P+ ITY  +I    K  ++ 
Sbjct: 613 DLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVA 672

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           +A  L  +       P SA+YN +I+GL +
Sbjct: 673 QASSLFERFRASGGIPDSASYNAMIEGLSI 702



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 230/498 (46%), Gaps = 4/498 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
           + G    A+ +  +MK  D   ++ TYN    +L    + +  + + D +K +    NV 
Sbjct: 248 KKGKTDKALRIFEEMKR-DAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVR 306

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I+ID LC+  +L +A    +    K   P   +  +++    K G  + A  ++  M
Sbjct: 307 TINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERM 366

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L     P+   Y  LI         E+  +   +M R G  PD +  +          + 
Sbjct: 367 LDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGET 426

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
                + +++  +G  PD  +Y++LI    + G   E  +L   M  QG  L+  AY+ +
Sbjct: 427 EKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTV 486

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   CKSG++++A  LL EM+ +G  P +VTY  ++ GL K D++ +A  L+ E  S  I
Sbjct: 487 IDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGI 546

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             N   + +++ G  +   + EA +  + ++      +V  +N ++DG VK   I EA+ 
Sbjct: 547 ELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALV 606

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
            ++ + + + +P+ +T+  LI G CK  K   A      ++  GL+P+ +TYT  ++   
Sbjct: 607 CFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLA 666

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + GN+ +  +L +        P   +Y  +I+GL    +  +A QL E+  + G +    
Sbjct: 667 KSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTK 726

Query: 485 TYNTIIRSFCKCKDLRKA 502
           T   ++ +  K + L +A
Sbjct: 727 TCVALLDALHKAECLEQA 744



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 121/532 (22%), Positives = 218/532 (40%), Gaps = 86/532 (16%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P    YT LI    ++G  +  L L   M   G+++NV   + L+    + GR+D AL L
Sbjct: 59  PAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSL 118

Query: 261 L-----------------------------------YEMEAVGLKPDLVTYSILIRGLCK 285
           L                                   +EM+A GL PD VTY+ ++  LCK
Sbjct: 119 LDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCK 178

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
            +++ +A++++ +M   R  P ++A+  +++G        EA    +      CI  VV 
Sbjct: 179 ANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVA 238

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN ++    K G   +A++++ ++ ++   P++ T+N +I   CK G V  A ++ D +K
Sbjct: 239 YNCILTCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMK 297

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             GL P+  T    ++  C+   +    ++ + M+ K   P   T+  +I GL KQ ++ 
Sbjct: 298 EAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVD 357

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK---------------------------- 497
           +A ++ E M      P+ + Y ++IR+F KC                             
Sbjct: 358 DAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYM 417

Query: 498 -------DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
                  +  K   L  ++      P + +Y+ILI  L   G  +    L  ++++    
Sbjct: 418 DCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCV 477

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SF 595
           L   AY T+I   C  G V+KA     +M   G   ++  Y                   
Sbjct: 478 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYML 537

Query: 596 FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           F    SNG   +Q I   ++  F + G +   + +   M++ GL P+ +  N
Sbjct: 538 FEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWN 589



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 119/294 (40%), Gaps = 21/294 (7%)

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           VK   + EA  L + +   +  P+   + +LI    + G+      L + ++  G E + 
Sbjct: 37  VKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNV 96

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
              TT +  +  EG +   L+LL EM++       V Y V I    K  K+  A +   +
Sbjct: 97  HLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHE 156

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M   G+ PD +TY +++   CK   L +A ++  QM  +   P +  YN +I G    G 
Sbjct: 157 MKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGK 216

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
              A  LL   +      + VAY  I+     +G   KA+  F +M              
Sbjct: 217 FDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM--------- 267

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                       P+     +++    + G++ + F++   M ++GL P+   IN
Sbjct: 268 ------------PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTIN 309


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 224/425 (52%), Gaps = 4/425 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFG-PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           ++D   + +   ++ +F   +    +G  + + ++ ++  Y K G  ++A   F     Y
Sbjct: 129 LLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDY 188

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G    A S N ++  L   G +        +M R  +  + +T+ ++  G   + +   A
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
             V++ +   G  P ++TY  +I GYC+ G + +   L + M+++    N I +++L+  
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG 308

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
            C+   +  A  +  EM+  GL+P++VTY+ LI GLC   K+ +A+ L ++M    + PN
Sbjct: 309 FCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPN 368

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              + A++ G C+K+M+ EAR   D +       +V+ +N +ID Y K G + +A  L  
Sbjct: 369 VVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRS 428

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            +++  + P++ T+N LI GFC+ G V +AR+L   ++ +GL+   VTY   ++A C++G
Sbjct: 429 MMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKG 488

Query: 428 NIQRLLALLQE---METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
             ++ + LL E   ME K      VTY V+IKG C + KL+EA +LL +M   G+ P++ 
Sbjct: 489 ETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRT 548

Query: 485 TYNTI 489
           TY+ +
Sbjct: 549 TYDIL 553



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 189/345 (54%), Gaps = 6/345 (1%)

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           +IG VE   K    M+ +   +NV+ + V+++ +CK G+  +A  ++ +M+A G  P ++
Sbjct: 209 RIGVVESVYK---EMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVI 265

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+ +I G CK  K+ KA  L  EM +KRI PN      ++ G C  E +T A+  F+ +
Sbjct: 266 TYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEM 325

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                  +VV YN +I+G    G + EA+ L  ++    + P++VT+N+LI GFCK   +
Sbjct: 326 QRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKML 385

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +AR +LD I   GL P+ +T+ T ++AY + G +     L   M    + P   TY  +
Sbjct: 386 KEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCL 445

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I G C++  ++EA +L ++M   G+  D +TYN ++ + CK  + RKA +LL++M L   
Sbjct: 446 IVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEK 505

Query: 515 EPTSA---TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
           +   A   TYN+LI G C  G L+ A+ LL  + E  +   +  Y
Sbjct: 506 KGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 550



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 228/419 (54%), Gaps = 8/419 (1%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           ++L+      G M+ ALE  +  G +G    A++ + +        +I     V ++++ 
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           +    ++VT+ V+I G C++G  ++   + E M + GF  +VI Y+ ++   CK+G++ +
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A  LL EM A  + P+ +T++ILI G C+ + V  A +++ EM  + + PN   + +++ 
Sbjct: 283 ADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLIN 342

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           GLC    + EA    D +       +VV YN +I+G+ K   + EA ++   + ++ ++P
Sbjct: 343 GLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAP 402

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           +++TFN+LI  + K G++ DA  L   +   G+ P+  TY   +  +C EGN++    L 
Sbjct: 403 NVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLA 462

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI---GVTPDQITYNTIIRSF 493
           +EME   +    VTY +++  LCK+ + ++AV+LL++M ++   G   + +TYN +I+ F
Sbjct: 463 KEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGF 522

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
           C    L +A +LLN+M    L P   TY+IL D +   G + + D  L     +N+S++
Sbjct: 523 CNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHL-----YNVSIS 576



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 219/433 (50%), Gaps = 15/433 (3%)

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           FH LS + G+W     +++           +L+  Y + G ++  L+  +     GF+L+
Sbjct: 145 FHSLS-VLGSWGCANSIIVD----------MLVWAYVKNGEMDLALEGFDRAGDYGFRLS 193

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            ++ + +L S+ K GRI     +  EM    +  ++VT+ ++I GLCK  K  KA  +  
Sbjct: 194 ALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVE 253

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M +   SP+   +  I+ G C+   + +A      ++      + + +NI+IDG+ +  
Sbjct: 254 DMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDE 313

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N+  A +++ ++  + + P++VT+NSLI G C NGK+ +A  L D +   GL+P+ VTY 
Sbjct: 314 NVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYN 373

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N +C++  ++    +L ++  + + P  +T+  +I    K  ++ +A  L   M   
Sbjct: 374 ALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDT 433

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           GV P+  TYN +I  FC+  ++++A +L  +M  + L+    TYNIL+D LC  G+ + A
Sbjct: 434 GVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKA 493

Query: 538 DCLL---VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS 594
             LL     +++       V Y  +IK  C +G + +A     +M+EKG  I  R     
Sbjct: 494 VRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGL-IPNRTTYDI 552

Query: 595 FFCMMLSNGFPPD 607
               M+  GF PD
Sbjct: 553 LRDEMMEKGFIPD 565



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 167/316 (52%), Gaps = 3/316 (0%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           D+ +D+K      +V T + +IDG C+  ++  A   L+E   K   P+ ++ N ++  +
Sbjct: 250 DVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF 309

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           C+      AK +F  M + GL P+  +YN LI+GLC  G ++EAL   + M   G++P+ 
Sbjct: 310 CRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +TY+ L  GF     +  A +++  +  +G  P+++T+  LI  Y + G +++   LR +
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           ML  G   NV  Y+ L+   C+ G + EA  L  EME  GLK DLVTY+IL+  LCK+ +
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489

Query: 289 VHKAIQLYNEMC---SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
             KA++L +EM     K    N   +  ++ G C K  + EA    + ++    I +   
Sbjct: 490 TRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 549

Query: 346 YNIMIDGYVKLGNIGE 361
           Y+I+ D  ++ G I +
Sbjct: 550 YDILRDEMMEKGFIPD 565



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 203/402 (50%), Gaps = 6/402 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVS 57
           ML + Y + G +  A+    +  +   ++S  + N +L +L       ++  +Y ++   
Sbjct: 164 MLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR 223

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               NV T  +VI+GLC+  + Q A   +++     F PSV++ N I+  YCK G    A
Sbjct: 224 RIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKA 283

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L   M+   +HP+  ++NILI G C   ++  A +   +M R G++P+ +TY+ L  G
Sbjct: 284 DALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLING 343

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A  +  K+   G  P++VTY  LI G+C+   ++E  ++ + +  +G   N
Sbjct: 344 LCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPN 403

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           VI ++ L+ +  K+GR+D+A  L   M   G+ P++ TY+ LI G C++  V +A +L  
Sbjct: 404 VITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM---SNCIQDVVLYNIMIDGYV 354
           EM    +  +   +  ++  LC+K    +A    D + +        ++V YN++I G+ 
Sbjct: 464 EMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFC 523

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
             G + EA +L  +++EK + P+  T++ L     + G + D
Sbjct: 524 NKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 565



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 147/296 (49%), Gaps = 20/296 (6%)

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N M+   VK G IG    +Y+++I +RI  ++VTF+ +I G CK GK   A  +++ +K 
Sbjct: 198 NPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKA 257

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G  PS +TY T ++ YC+ G + +  ALL+EM  K I P  +T+ ++I G C+   +  
Sbjct: 258 WGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTA 317

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A ++ E+M   G+ P+ +TYN++I   C    L +A  L ++M    L+P   TYN LI+
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           G C    LK A  +L  + +  ++   + + T+I A+   G +  A              
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRS--------- 428

Query: 587 SIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                      MML  G  P+      +++ F + G++    +LA  M  +GL  D
Sbjct: 429 -----------MMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKAD 473



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 133/265 (50%), Gaps = 6/265 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           + R   V  A  V  +M+   L+ ++ TYNSL+  L      D    L D +       N
Sbjct: 309 FCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPN 368

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +I+G C++  L++A   L +   +   P+V++ N ++  Y K G  + A  L  
Sbjct: 369 VVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRS 428

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +ML  G+ P+  +YN LI G C  G+++EA +   +M  +G++ D +TY+IL        
Sbjct: 429 MMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKG 488

Query: 183 QISGAWKVIQKLLI---KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           +   A +++ ++ +   KG   +IVTY VLI G+C  G +EE  +L   ML +G   N  
Sbjct: 489 ETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRT 548

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEM 264
            Y +L   M + G I +  G LY +
Sbjct: 549 TYDILRDEMMEKGFIPDIDGHLYNV 573


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 244/494 (49%), Gaps = 25/494 (5%)

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKE--FGPSVVSLNAIMSRYCKLGFAEVAK 118
           R V + + V++ + Q+     A+ F +   G +    P+V+S N ++   CKLG  + A 
Sbjct: 149 RTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAI 208

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M      PD F+Y  L+ GLC    ++EA+   ++M   G  P ++T+++L  G 
Sbjct: 209 EVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGL 268

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                +    K++  + +KG  P+ VTY  +I G C  G +++ + L + M++     N 
Sbjct: 269 CKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPND 328

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y  L++ + K GR  + + LL  +E  G   +   YS LI GL K++K  +A+ L+ +
Sbjct: 329 VTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKK 388

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  K   PN   + A++ GLC +  + EA+     ++   C  +   Y+ +I G+ K GN
Sbjct: 389 MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGN 448

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             +A+++++++ +    P+ + ++ LI+G C++GK+ +A  +   +   GL P  V Y++
Sbjct: 449 SQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSS 508

Query: 419 FMNAYCEEGNIQRLLALLQEM--ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
            ++  C  G+++  L L  EM  +     P  VTY ++++ LCKQ  +  A+ LL  M  
Sbjct: 509 MIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLD 568

Query: 477 IGVTPDQITYNTII-------------RSFC--------KCKDLRKAFQLLNQMWLHNLE 515
            G  PD IT N  +             R F         K + +  A +++  M    L 
Sbjct: 569 RGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLP 628

Query: 516 PTSATYNILIDGLC 529
           P ++T+  +I  LC
Sbjct: 629 PNASTWERIIPELC 642



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 232/469 (49%), Gaps = 21/469 (4%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D   +++ ++ + +   +V+T   ++DGLC++ R+ +A+L L E   +   PS V+ N +
Sbjct: 205 DRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVL 264

Query: 105 MSRYCKLG-FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           ++  CK G    V K +  + LK G  P+  +YN +I+GLC+ G +++A+   + M    
Sbjct: 265 INGLCKKGDMVRVTKLVDNMFLK-GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASK 323

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
             P+ +TY  L  G     +      ++  L  +G   +   Y+ LI G  +    EE +
Sbjct: 324 CVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAM 383

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
            L + M+ +G + N++ YS L+  +C+ G++DEA  +L EM   G  P+  TYS LI+G 
Sbjct: 384 GLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGF 443

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
            K     KAI+++ EM      PN   +  ++ GLCE   + EA M +  ++      DV
Sbjct: 444 FKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDV 503

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLI--EKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           V Y+ MI G    G++   ++L+ +++  E    P +VT+N L+   CK   ++ A  LL
Sbjct: 504 VAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLL 563

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           +++   G  P  +T   F+N            AL +++     G   +   VV   L K+
Sbjct: 564 NSMLDRGCNPDLITCNIFLN------------ALREKLNPPQDGREFLDELVV--RLHKR 609

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
            ++  A +++E M    + P+  T+  II   CK K   K   ++++ W
Sbjct: 610 QRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPK---KVQAIIDKCW 655



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 189/344 (54%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NV+++++++ +MCK G +D A+ +  EM     +PD+ TY  L+ GLCK+D++ +A+ L 
Sbjct: 187 NVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLL 246

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           +EM  +   P+S     ++ GLC+K  +       D++ +  C+ + V YN +I+G    
Sbjct: 247 DEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLK 306

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G + +AV L  +++  +  P+ VT+ +LI G  K G+  D   LL +++  G   +   Y
Sbjct: 307 GKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAY 366

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           +T ++   +E   +  + L ++M  K   P  V Y+ +I GLC++ KL EA ++L +M  
Sbjct: 367 STLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVN 426

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G TP+  TY+++I+ F K  + +KA ++  +M  +N  P    Y++LI GLC +G L+ 
Sbjct: 427 KGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLRE 486

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           A  +   +    +    VAY+++I   C  G V   +  F +M+
Sbjct: 487 AMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 530



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 217/447 (48%), Gaps = 7/447 (1%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P+++++ ++I   C++G V+  +++   M  Q  + +V  Y  L+  +CK  RIDEA+ L
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 245

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L EM+  G  P  VT+++LI GLCK+  + +  +L + M  K   PN   +  I+ GLC 
Sbjct: 246 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 305

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
           K  + +A    D ++ S C+ + V Y  +I+G VK G   + V L   L E+    +   
Sbjct: 306 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 365

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           +++LI G  K  K  +A  L   +   G +P+ V Y+  ++  C EG +     +L EM 
Sbjct: 366 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 425

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            K   P   TY+ +IKG  K    Q+A+++ ++M      P++I Y+ +I   C+   LR
Sbjct: 426 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 485

Query: 501 KAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL--QEHNISLTKVAYTT 558
           +A  +   M    L P    Y+ +I GLC  G ++    L   +  QE +     V Y  
Sbjct: 486 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 545

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ---EICEVML 615
           +++A C +  +  A+     M+++G    +   T + F   L     P Q   E  + ++
Sbjct: 546 LLRALCKQNSISHAIDLLNSMLDRGCNPDL--ITCNIFLNALREKLNPPQDGREFLDELV 603

Query: 616 IAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +  H+   +    ++  VM++  L P+
Sbjct: 604 VRLHKRQRIVGAAKIIEVMLQKFLPPN 630



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 208/427 (48%), Gaps = 19/427 (4%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDIMW--DLYDDIKVSETPRNVYTNSI 68
           + +AV ++ +M+      S  T+N L+  L +  D++    L D++ +     N  T + 
Sbjct: 239 IDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 298

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I+GLC + +L  A+  L      +  P+ V+   +++   K G +     L   + + G
Sbjct: 299 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 358

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
            H + ++Y+ LI GL      EEA+     M   G +P+ + YS L  G     ++  A 
Sbjct: 359 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 418

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           +++ +++ KG  P+  TY+ LI G+ + GN ++ +++ + M       N I YSVL+  +
Sbjct: 419 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 478

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM-CSKRIS-P 306
           C+ G++ EA+ +   M   GL+PD+V YS +I GLC    V   ++L+NEM C +  S P
Sbjct: 479 CEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 538

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +  +L  LC++  I+ A    +S++   C  D++  NI ++   +  N     Q  
Sbjct: 539 DVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLN---PPQDG 595

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           R+ +++           L+    K  ++  A ++++ +    L P+A T+   +   C+ 
Sbjct: 596 REFLDE-----------LVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKP 644

Query: 427 GNIQRLL 433
             +Q ++
Sbjct: 645 KKVQAII 651


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 227/446 (50%), Gaps = 4/446 (0%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           S L N +H   +  L+   + +    ++ T SI+I+  C Q+ +  A         + F 
Sbjct: 65  SSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFH 124

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFC--LMLKYGLHPDAFSYNILIHGLCIAGSMEEAL 153
           P+ ++LN ++   C  G  E+ K L+    ++  G   D  SY  LI+GLC  G  +   
Sbjct: 125 PNAITLNTLIKGLCFRG--EIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVA 182

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
                +  H V+PD + Y+ +         +  A  V  ++++KG  PD+VTYT LI G+
Sbjct: 183 RLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGF 242

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C +G+++E   L   M  +    NV  +++L+ ++ K G++ EA  LL  M    +KPD+
Sbjct: 243 CIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDV 302

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
            TY+ LI G    D+V  A  ++  M  + ++P+   +  ++ GLC+ +M+ EA   F+ 
Sbjct: 303 FTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEE 362

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +   N I D+V YN +IDG  K  ++  A+ L +++ E+ I P + ++  L+ G CK+G+
Sbjct: 363 MKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGR 422

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + DA+ +   +   G   +   YT  +N  C+ G     L L  +ME K   P  VT+ +
Sbjct: 423 LEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDI 482

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +I+ L ++ +  +A ++L +M   G+
Sbjct: 483 IIRALFEKDENDKAEKILREMIARGL 508



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 223/463 (48%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F LML     P  F +N ++  L         +        +G+ PD  T SIL   F  
Sbjct: 45  FNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCH 104

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
            + I+ A+ V   +L +G  P+ +T   LI G C  G +++ L   + +++QGF+L+ ++
Sbjct: 105 QAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVS 164

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y  L++ +CK+G       LL ++E   +KPD+V Y+ +I  LCK   +  A  +Y+EM 
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 224

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K ISP+   +  ++ G C    + EA    + + + N   +V  +NI+ID   K G + 
Sbjct: 225 VKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMK 284

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA  L   +++  I P + T+NSLI G+    +V  A+ +  ++   G+ P    YT  +
Sbjct: 285 EAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMI 344

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N  C+   +   ++L +EM+ K + P  VTY  +I GLCK   L+ A+ L + M   G+ 
Sbjct: 345 NGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQ 404

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD  +Y  ++   CK   L  A ++  ++           Y +LI+ LC  G    A  L
Sbjct: 405 PDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDL 464

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
              +++       V +  II+A   + +  KA     +M+ +G
Sbjct: 465 KSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARG 507



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 219/455 (48%), Gaps = 1/455 (0%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P   + N+I +  L         I   ++       P + +L+ +++ +C      +A  
Sbjct: 55  PPTFHFNNI-LSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFS 113

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F  +LK G HP+A + N LI GLC  G +++AL F + +   G + D ++Y  L  G  
Sbjct: 114 VFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLC 173

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              +     ++++KL      PD+V Y  +I   C+   + +   +   M+ +G   +V+
Sbjct: 174 KTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 233

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+ L+   C  G + EA  LL EM+   + P++ T++ILI  L K+ K+ +A  L   M
Sbjct: 234 TYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVM 293

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               I P+ F + +++ G    + +  A+  F S+       DV  Y  MI+G  K   +
Sbjct: 294 MKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMV 353

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA+ L+ ++  K + P IVT+NSLI G CKN  +  A  L   +K  G++P   +YT  
Sbjct: 354 DEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTIL 413

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C+ G ++    + Q +  K        YTV+I  LCK     EA+ L   M   G 
Sbjct: 414 LDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGC 473

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
            PD +T++ IIR+  +  +  KA ++L +M    L
Sbjct: 474 MPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 201/452 (44%), Gaps = 50/452 (11%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++ +LSS+  +      + L  + E  G+ PDL T SILI   C Q  +  A  ++  + 
Sbjct: 60  FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            +   PN+     ++ GLC +  I +A  + D L+      D V Y  +I+G  K G   
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
              +L R+L    + P +V +N++I   CKN  + DA  +   + + G+ P  VTYTT +
Sbjct: 180 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 239

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM------ 474
           + +C  G+++   +LL EM+ K I P   T+ ++I  L K+ K++EA  LL  M      
Sbjct: 240 HGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIK 299

Query: 475 -----------------------YVI------GVTPDQITYNTIIRSFCKCKDLRKAFQL 505
                                  YV       GVTPD   Y  +I   CK K + +A  L
Sbjct: 300 PDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSL 359

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
             +M   N+ P   TYN LIDGLC N  L+ A  L   ++E  I     +YT ++   C 
Sbjct: 360 FEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCK 419

Query: 566 EGDVHKAMTFFCQMVEKGFEISIRDYT--------KSFF-------CMMLSNGFPPDQEI 610
            G +  A   F +++ KG+ +++  YT          FF         M   G  PD   
Sbjct: 420 SGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVT 479

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            ++++ A  +  +     ++   MI  GLL +
Sbjct: 480 FDIIIRALFEKDENDKAEKILREMIARGLLKE 511



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 145/301 (48%)

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A+  +N M   R  P +F    IL  L   +        F     +    D+   +I+I+
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
            +    +I  A  ++  ++++   P+ +T N+LI G C  G++  A    D +   G + 
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
             V+Y T +N  C+ G  + +  LL+++E  ++ P  V Y  +I  LCK   L +A  + 
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            +M V G++PD +TY T+I  FC    L++AF LLN+M L N+ P   T+NILID L   
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKE 280

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           G +K A  LL  + +  I      Y ++I  +    +V  A   F  M ++G    ++ Y
Sbjct: 281 GKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCY 340

Query: 592 T 592
           T
Sbjct: 341 T 341



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 166/338 (49%), Gaps = 3/338 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           +TG       ++ K++   +K  +  YN+++ +L    ++ D   +Y ++ V     +V 
Sbjct: 174 KTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 233

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I G C    L++A   L E   K   P+V + N ++    K G  + AK L  +M
Sbjct: 234 TYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVM 293

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +K  + PD F+YN LI G  +   ++ A      M + GV PD   Y+ +  G      +
Sbjct: 294 MKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMV 353

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  + +++  K   PDIVTY  LI G C+  ++E  + L + M  QG + +V +Y++L
Sbjct: 354 DEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTIL 413

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L  +CKSGR+++A  +   + A G   ++  Y++LI  LCK     +A+ L ++M  K  
Sbjct: 414 LDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGC 473

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
            P++     I+  L EK+   +A      +I    +++
Sbjct: 474 MPDAVTFDIIIRALFEKDENDKAEKILREMIARGLLKE 511



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 125/286 (43%), Gaps = 20/286 (6%)

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           AV  +  ++  R  P    FN+++     N        L    + +G+ P   T +  +N
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C + +I    ++   +  +   P  +T   +IKGLC + ++++A+   + +   G   
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           DQ++Y T+I   CK  + +   +LL ++  H+++P    YN +I+ LC N  L +A  + 
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLS 601
             +    IS   V YTT+I   C  G + +A +   +M  K    ++  +          
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFN--------- 271

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                      +++ A  + G +     L AVM+K+ + PD F  N
Sbjct: 272 -----------ILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYN 306


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 251/527 (47%), Gaps = 14/527 (2%)

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           NS+++  L +  +L DA+ F Q +  +   P+V S N ++  +      EV   L   M 
Sbjct: 1   NSLLL-ALVRGGQLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREMK 56

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE-------PDAITYSILAKGF 178
             G+  +  ++ +++  LC    +++A+ + N               PD++TY+ +  G 
Sbjct: 57  ARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGL 116

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                     +  +K++    +P ++TYTVL+ G C+   VE    + E M+ +G K ++
Sbjct: 117 FKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDI 176

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           IAYS L+  + K+GR+DEA  L+  M A G  P  V Y+ ++ GLCK  ++ +A++   E
Sbjct: 177 IAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQE 236

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  +R+ P    +  I+ G      + EA    + +   +C  D + Y + I+    +G 
Sbjct: 237 MRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGR 296

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
             EA +++  ++EK   P + T+  +I  FCK G +A A  +L  +    ++P+   YT 
Sbjct: 297 REEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTM 356

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            M+ + +   ++  L L Q +    I P+ VTY  VI  LCK  K+ EA++LL +M    
Sbjct: 357 IMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRK 416

Query: 479 --VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             + P  +TY+ II    K     +AF LL +M  + + P   TY  LI  L   G +  
Sbjct: 417 EELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSR 476

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           A  LL  + +  I      Y T+++  C   DV  A     +M+  G
Sbjct: 477 AMELLEEMLKAGIFPDDHTYGTLVQILC-RSDVDAAWDLLQEMMRNG 522



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 227/462 (49%), Gaps = 41/462 (8%)

Query: 33  TYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TY ++   L+   + D   + Y+ +  S+    + T ++++DGLC+  +++ A    +E 
Sbjct: 108 TYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEM 167

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             K   P +++ ++++    K G  + A+ L  LM+  G  P A +Y  ++ GLC  G +
Sbjct: 168 IRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRI 227

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +EA++   +M R  + P   TYS +  G+  + ++  A+ V++++  +   PD ++YT+ 
Sbjct: 228 QEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMF 287

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I     IG  EE  K+ E M+ +G K ++  Y +++ + CK G +  A  +L  M+   +
Sbjct: 288 IEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAV 347

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           KP+   Y++++ G  K  ++ +A++LY  +    I P++  +  ++  LC          
Sbjct: 348 KPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALC---------- 397

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR--ISPSIVTFNSLIYG 387
                                    KL  + EA++L R++  ++  + PSIVT++ +I+G
Sbjct: 398 -------------------------KLKKMDEALELLREMQRRKEELEPSIVTYSMIIHG 432

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
             K G    A  LL  +  +G+ P   TYT+ +      G + R + LL+EM    I P 
Sbjct: 433 LGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPD 492

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
             TY  +++ LC+   +  A  LL++M   G TP++ T+  +
Sbjct: 493 DHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAV 533



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 224/488 (45%), Gaps = 35/488 (7%)

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           Q+S A    Q  +   S+P++ ++ +L+ G+    + E    L   M ++G   N   + 
Sbjct: 12  QLSDALGFFQSSI---SEPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHG 68

Query: 243 VLLSSMCK-----------SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           V+LS++C            + R +EA  L   +EA    PD VTY+ ++ GL K      
Sbjct: 69  VILSALCARRDLDKAVSYFNSRTEEACRLFEAIEA----PDSVTYTAIVDGLFKAGNYDA 124

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
            ++ Y +M + +  P    +  ++ GLC+   +  A   F+ +I      D++ Y+ +ID
Sbjct: 125 GLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLID 184

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G  K G + EA +L   +I +   P+ V + S++ G CK G++ +A + +  ++   L P
Sbjct: 185 GLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRP 244

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
              TY+  +  Y   G ++   A+++EM  +   P  ++YT+ I+ L    + +EA ++ 
Sbjct: 245 RVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVF 304

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
           E M   G  PD  TY  II +FCK   +  A  +L  M    ++P    Y +++DG   +
Sbjct: 305 ETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKS 364

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI--SIR 589
             L+ A  L   + +  I  + V Y T+I A C    + +A+    +M  +  E+  SI 
Sbjct: 365 SRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIV 424

Query: 590 DYT-------------KSF--FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVM 634
            Y+             ++F     M+ NG  PD      ++      G +    EL   M
Sbjct: 425 TYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEM 484

Query: 635 IKSGLLPD 642
           +K+G+ PD
Sbjct: 485 LKAGIFPD 492



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 190/411 (46%), Gaps = 30/411 (7%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           LL ++ + G++ +ALG     ++   +P++ +++IL+RG   +D       L  EM ++ 
Sbjct: 3   LLLALVRGGQLSDALGFF---QSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKARG 59

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC-------IQDVVLYNIMIDGYVKL 356
           I+ N   HG IL  LC +  + +A  YF+S     C         D V Y  ++DG  K 
Sbjct: 60  ITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKA 119

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           GN    ++ Y +++  +  P+++T+  L+ G CK  KV  A  + + +   G +P  + Y
Sbjct: 120 GNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAY 179

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           ++ ++   + G +     L+  M  +   PT V YT ++ GLCK  ++QEAV+ +++M  
Sbjct: 180 SSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRR 239

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             + P   TY+ I+  +     + +AF ++ +M   +  P + +Y + I+ L   G  + 
Sbjct: 240 RRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREE 299

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFF 596
           A+ +  ++ E         Y  II   C EG +  A T   ++++K              
Sbjct: 300 AEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSM-AAATHVLRLMDKA------------- 345

Query: 597 CMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                    P++ I  +++  F +   L    EL   ++K G+LP     N
Sbjct: 346 ------AVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYN 390



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 6/276 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRN 62
           Y   G V +A  V+ +M + D      +Y      LY++   +    +++ +       +
Sbjct: 256 YIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPD 315

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           ++T  I+ID  C++  +  A   L+        P+      IM  + K    E A  L+ 
Sbjct: 316 MHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQ 375

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG--VEPDAITYSILAKGFHL 180
            +LK G+ P   +YN +I+ LC    M+EALE   +M R    +EP  +TYS++  G   
Sbjct: 376 RILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGK 435

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +     A+ ++ +++  G  PD  TYT LI      G V   ++L E ML  G   +   
Sbjct: 436 VGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHT 495

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           Y  L+  +C+S  +D A  LL EM   G  P+  T+
Sbjct: 496 YGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTF 530


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 241/474 (50%), Gaps = 28/474 (5%)

Query: 23  KELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRL 79
           K +++  ++ T+N ++  +    ++ D   ++ D+ VS+   +VYT   ++DGLC+  R+
Sbjct: 161 KGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRI 220

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEVAKGLFCLMLKYGLHPDAFSYNI 138
            +A+  L E       PS V+ N +++  CK G  A VAK +  + LK G  P+  +YN 
Sbjct: 221 DEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLK-GCAPNEVTYNT 279

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LIHGLC+ G +E+A+   + M      P+ +TY  +  G     +     +V+  +  +G
Sbjct: 280 LIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERG 339

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
              +   Y+ LI G  + G  +E ++L + M  +  +LN I YS ++  +C+ G+ DEAL
Sbjct: 340 YHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEAL 399

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +L EM     KP+  TYS L++G  +    HKAI+++ +M     + N   +  ++ GL
Sbjct: 400 EVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGL 459

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI--EKRISP 376
           C+   + EA M +  ++   C  DVV Y  MI+G    G + +A+QLY +++  E    P
Sbjct: 460 CKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQP 519

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE----------- 425
            +VT+N L+   CK   ++ A  LL+++   G +P  VT   F+    E           
Sbjct: 520 DVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREF 579

Query: 426 -EGNIQRLL---------ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
            +G + RLL          +++ M  K + P   T+T V++ LC   K+Q A+Q
Sbjct: 580 LDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQ 633



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 218/441 (49%), Gaps = 5/441 (1%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKE---FGPSVVSLNAIMSRYCKLGFA 114
           E  R V + + V++ + Q+     A+ F     G +     P+V++ N ++   CK+G  
Sbjct: 126 ECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLV 185

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           + A  +F  M      PD ++Y  L+ GLC A  ++EA+   ++M   G  P  +T+++L
Sbjct: 186 DDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVL 245

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G      ++   K++  + +KG  P+ VTY  LI G C  G +E+ + L + M+S   
Sbjct: 246 INGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKC 305

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             NV+ Y  +++ + K GR  +   +L  ME  G   +   YS LI GL K+ K  +A+Q
Sbjct: 306 VPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQ 365

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L+ EM  K    N+  + A++ GLC      EA      +  + C  +   Y+ ++ G+ 
Sbjct: 366 LFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFF 425

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           + GN  +A+++++ + +   + + V ++ LI+G CK+GKV +A  +   +   G +P  V
Sbjct: 426 EAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVV 485

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEM--ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            Y + +N     G ++  L L  EM  +     P  VTY +++  LCKQ  +  A+ LL 
Sbjct: 486 AYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLN 545

Query: 473 DMYVIGVTPDQITYNTIIRSF 493
            M   G  PD +T    +R+ 
Sbjct: 546 SMLDRGCDPDLVTCIIFLRTL 566



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 222/479 (46%), Gaps = 70/479 (14%)

Query: 104 IMSRYCKLGFAEVAKGLFCLML-KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH 162
           I   Y K    E A GLF  M  ++       S+N +++ +   G    ALEF N     
Sbjct: 101 IFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYN----- 155

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
                   + I AKG ++                    P+++T+ ++I   C++G V++ 
Sbjct: 156 --------HVIGAKGVNI-------------------SPNVLTFNLVIKTMCKVGLVDDA 188

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           +++   M     + +V  Y  L+  +CK+ RIDEA+ LL EM+  G  P  VT+++LI G
Sbjct: 189 VQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLING 248

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           LCK+  + +  +L + M  K  +PN   +  ++ GLC K  + +A    D ++ S C+ +
Sbjct: 249 LCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPN 308

Query: 343 VVLYNIMIDGYVKLGNI-----------------------------------GEAVQLYR 367
           VV Y  +I+G VK G                                      EA+QL++
Sbjct: 309 VVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFK 368

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           ++  K    + + ++++I G C++GK  +A  +L  +  +  +P+A TY++ M  + E G
Sbjct: 369 EMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAG 428

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           N  + + + ++M         V Y+V+I GLCK  K++EA+ +   M   G  PD + Y 
Sbjct: 429 NGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYG 488

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLH--NLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           ++I        +  A QL N+M     + +P   TYNIL++ LC    +  A  LL S+
Sbjct: 489 SMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSM 547



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 188/370 (50%), Gaps = 8/370 (2%)

Query: 219 VEEGLKLR------EVMLSQGFKL--NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
           ++EGL  R       V+ ++G  +  NV+ +++++ +MCK G +D+A+ +  +M     +
Sbjct: 142 IQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQ 201

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           PD+ TY  L+ GLCK D++ +A+ L +EM      P+      ++ GLC+K  +      
Sbjct: 202 PDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKL 261

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            D++ +  C  + V YN +I G    G + +A+ L  +++  +  P++VT+ ++I G  K
Sbjct: 262 VDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVK 321

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G+  D  R+L  ++  G   +   Y+  ++   +EG  Q  + L +EM  K      + 
Sbjct: 322 QGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIV 381

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y+ VI GLC+  K  EA+++L +M      P+  TY+++++ F +  +  KA ++   M 
Sbjct: 382 YSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMA 441

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
            HN       Y++LI GLC +G +K A  +   +         VAY ++I      G V 
Sbjct: 442 KHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVE 501

Query: 571 KAMTFFCQMV 580
            A+  + +M+
Sbjct: 502 DALQLYNEML 511



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 190/363 (52%), Gaps = 9/363 (2%)

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEM---EAVGLKPDLVTYSILIRGLCKQDKVHK 291
           K  V +++ +L+ + + G    AL     +   + V + P+++T++++I+ +CK   V  
Sbjct: 128 KRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDD 187

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A+Q++ +M   +  P+ + +  ++ GLC+ + I EA    D + +  C    V +N++I+
Sbjct: 188 AVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLIN 247

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G  K G++    +L   +  K  +P+ VT+N+LI+G C  GK+  A  LLD +      P
Sbjct: 248 GLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVP 307

Query: 412 SAVTYTTFMNAYCEEGNI---QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + VTY T +N   ++G      R+LAL   ME +        Y+ +I GL K+ K QEA+
Sbjct: 308 NVVTYGTIINGLVKQGRALDGARVLAL---MEERGYHVNEYVYSALISGLFKEGKSQEAM 364

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           QL ++M V     + I Y+ +I   C+     +A ++L++M  +  +P + TY+ L+ G 
Sbjct: 365 QLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGF 424

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
              G+   A  +   + +HN +  +V Y+ +I   C +G V +AM  + QM+ KG +  +
Sbjct: 425 FEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDV 484

Query: 589 RDY 591
             Y
Sbjct: 485 VAY 487


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 157/603 (26%), Positives = 270/603 (44%), Gaps = 32/603 (5%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           R G+ + A+  + ++K+L  K S  TYN+L+         D  + ++ ++  S    + Y
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY 268

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T    +  LC+  R ++A+  +++   +EF    V    ++S  C+    E A      M
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
                 P+  +Y IL+ G      +       + M   G  P    ++ L   +      
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN--------VEEGLKLREVMLSQGFKL 236
           S A+K+++K+   G  P  V Y +LI G C  GN        +E   K    ML     L
Sbjct: 386 SYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSLDVLELAEKAYGEMLDAHVVL 443

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N +  S L   +C +G+ ++A  ++ EM + G  PD  TYS +I  LC   KV  A  L+
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM S  + P+ F +  ++   C+  ++ +AR +FD ++   C  +VV Y  +I  Y+K 
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-------- 408
             +  A +L+  ++ +   P++VT+ +LI G CK+G++  A ++   ++ +         
Sbjct: 564 RKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY 623

Query: 409 --------LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
                    +P+  TY   ++  C+   ++    LL  M  +   P H+ Y  +I G CK
Sbjct: 624 FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             KL EA  +   M   G  P+  TY+++I    K K L  A ++L++M  ++  P    
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y  +IDGLC  G    A  L+  ++E       V YT +I      G V K +    QM 
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803

Query: 581 EKG 583
            KG
Sbjct: 804 AKG 806



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 174/693 (25%), Positives = 298/693 (43%), Gaps = 79/693 (11%)

Query: 8   RTGMVHDAVFVIAKMK-ELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           + G   +A+ +I K + +LD  +  Q  + L       + M D    ++ S    NV T 
Sbjct: 279 KAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAM-DFLSRMRSSSCIPNVVTY 337

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
            I++ G  ++ +L      L     +   PS    N+++  YC+ G    A  L   M  
Sbjct: 338 RILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGD 397

Query: 127 YGLHPDAFSYNILIHG-----------------------------------------LCI 145
            G  P    YNILI G                                         LC 
Sbjct: 398 CGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCG 457

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
           AG  E+A     +M   G  PD  TYS +       S++  A+ + +++      PD+ T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           YT+LI  +C++G +++  K  + M+  G   NV+ Y+ L+ +  K+ ++  A  L   M 
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR----------------ISPNSF 309
           + G  P++VTY+ LI G CK  ++ KA Q+Y  M                      PN F
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            +GA++ GLC+   + EAR   D + +  C  + ++Y+ +IDG+ K+G + EA  ++ ++
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            E+   P++ T++SLI    K+ ++  A ++L  +  +   P+ + YT  ++  C+ G  
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
                L+  ME K   P  VTYT +I G  K  K+ + ++L+  M   G  P+ +TY  +
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I   C    L  A QLL++M         A Y  +I+G   N +   +  LL  + E+  
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVA 875

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
                AY  +I + C  G +  A+     M       S   Y+ +            D++
Sbjct: 876 VPIIPAYRILIDSFCKAGRLELALELHKXMS------SCTSYSAA------------DKD 917

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +   ++ +      +   FEL A MIK G +P+
Sbjct: 918 LYSSLIESLSLASKVDKAFELYADMIKRGGIPE 950



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 218/485 (44%), Gaps = 20/485 (4%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +  T S VI  LC  S++ +A L  +E       P V +   ++  +CK+G  + A+  F
Sbjct: 479 DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWF 538

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M++ G  P+  +Y  LIH    A  M  A E    M   G  P+ +TY+ L  G    
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598

Query: 182 SQISGAWKVIQKLLIKGS----------------DPDIVTYTVLICGYCQIGNVEEGLKL 225
            QI  A ++  ++                     DP+I TY  L+ G C+   V+E   L
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
            +VM  +G + N I Y  L+   CK G++DEA  +  +M   G  P++ TYS LI  L K
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
             ++  A+++ + M     +PN   +  ++ GLC+     EA      +    C  +VV 
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y  MIDG+ K G + + ++L RQ+  K  +P+ VT+  LI   C  G + DA +LLD +K
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
                     Y   +  +  E  I   L LL E+      P    Y ++I   CK  +L+
Sbjct: 839 QTYWPKHMAGYRKVIEGFNREFIIS--LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896

Query: 466 EAVQLLEDMYVIG--VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
            A++L + M         D+  Y+++I S      + KAF+L   M      P  + +  
Sbjct: 897 LALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFY 956

Query: 524 LIDGL 528
           L+ GL
Sbjct: 957 LVKGL 961



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 189/423 (44%), Gaps = 26/423 (6%)

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+   C++G  + AL  L  ++ +G KP  +TY+ L+R   + D++  A  ++ EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIG 360
              + + +  G  +  LC+     EA     +LI     + D V+Y  MI G  +     
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREAL----ALIEKEEFKLDTVIYTQMISGLCEASLFE 316

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+    ++      P++VT+  L+ G  +  ++   +R+L  +   G  PS   + + +
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ--EAVQLLE----DM 474
           +AYC  G+      LL++M      P +V Y ++I G+C   KL   + ++L E    +M
Sbjct: 377 HAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEM 436

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
               V  +++  + + R  C      KA+ ++ +M      P ++TY+ +I  LC    +
Sbjct: 437 LDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKV 496

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-- 592
            NA  L   ++ +++      YT +I + C  G + +A  +F +MV  G   ++  YT  
Sbjct: 497 DNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTAL 556

Query: 593 -------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                           F MMLS G  P+      ++    + G +    ++ A M  +  
Sbjct: 557 IHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNAD 616

Query: 640 LPD 642
           +PD
Sbjct: 617 IPD 619



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 182/373 (48%), Gaps = 11/373 (2%)

Query: 23  KELDLKVSIQTYNSLLYNLRHTDI-MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQD 81
           K   ++ + Q Y  +  N    D+ M+   DD  + +   N++T   ++DGLC+  ++++
Sbjct: 597 KSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP--NIFTYGALVDGLCKAHKVKE 654

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
           A   L   + +   P+ +  +A++  +CK+G  + A+ +F  M + G  P+ ++Y+ LI 
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
            L     ++ AL+  + M  +   P+ I Y+ +  G   + +   A++++  +  KG  P
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           ++VTYT +I G+ + G V++ L+L   M ++G   N + Y VL++  C +G +D+A  LL
Sbjct: 775 NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            EM+       +  Y  +I G  ++  +  ++ L +E+      P   A+  ++   C+ 
Sbjct: 835 DEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKA 892

Query: 322 EMITEARMYFDSLIMSNCIQ----DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
             +  A        MS+C      D  LY+ +I+       + +A +LY  +I++   P 
Sbjct: 893 GRLELALELHKX--MSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPE 950

Query: 378 IVTFNSLIYGFCK 390
           +  F  L+ G  +
Sbjct: 951 LSIFFYLVKGLIR 963



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 133/305 (43%), Gaps = 29/305 (9%)

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN ++  +++   +  A  ++R++ +   +    T    ++  CK G+  +A   L  I+
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA---LALIE 291

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
               +   V YT  ++  CE    +  +  L  M + +  P  VTY +++ G  ++ +L 
Sbjct: 292 KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
              ++L  M   G  P +  +N++I ++C+  D   A++LL +M     +P    YNILI
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411

Query: 526 DGLCVNGDLKNADCLLVSLQEH------NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            G+C N  L + D L ++ + +      ++ L KV  + + +  C  G   KA +     
Sbjct: 412 GGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSI---- 467

Query: 580 VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                   IR+        M+S GF PD      ++        + + F L   M  + +
Sbjct: 468 --------IRE--------MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV 511

Query: 640 LPDKF 644
           +PD F
Sbjct: 512 VPDVF 516



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 143/351 (40%), Gaps = 53/351 (15%)

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY------------------ 386
           L N++I    + G    A++   +L +    PS +T+N+L+                   
Sbjct: 199 LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREM 258

Query: 387 ---GFCKNG-----------KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              GF  +G           K    R  L  I+    +   V YT  ++  CE    +  
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEA 318

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           +  L  M + +  P  VTY +++ G  ++ +L    ++L  M   G  P +  +N++I +
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH----- 547
           +C+  D   A++LL +M     +P    YNILI G+C N  L + D L ++ + +     
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLD 438

Query: 548 -NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS------------ 594
            ++ L KV  + + +  C  G   KA +   +M+ KGF      Y+K             
Sbjct: 439 AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDN 498

Query: 595 ---FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
               F  M SN   PD     +++ +F + G L    +    M++ G  P+
Sbjct: 499 AFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 18/211 (8%)

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            V+I+  C+      A++ L  +  +G  P ++TYN ++R F +   L  A+ +  +M  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
                   T    +  LC  G  + A   L  +++    L  V YT +I   C      +
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREA---LALIEKEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 572 AMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLI 616
           AM F  +M       ++  Y                K    MM++ G  P + I   ++ 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           A+ + GD    ++L   M   G  P   + N
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYN 408


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 157/603 (26%), Positives = 270/603 (44%), Gaps = 32/603 (5%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVY 64
           R G+ + A+  + ++K+L  K S  TYN+L+         D  + ++ ++  S    + Y
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY 268

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T    +  LC+  R ++A+  +++   +EF    V    ++S  C+    E A      M
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
                 P+  +Y IL+ G      +       + M   G  P    ++ L   +      
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN--------VEEGLKLREVMLSQGFKL 236
           S A+K+++K+   G  P  V Y +LI G C  GN        +E   K    ML     L
Sbjct: 386 SYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSLDVLELAEKAYGEMLDAHVVL 443

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N +  S L   +C +G+ ++A  ++ EM + G  PD  TYS +I  LC   KV  A  L+
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM S  + P+ F +  ++   C+  ++ +AR +FD ++   C  +VV Y  +I  Y+K 
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-------- 408
             +  A +L+  ++ +   P++VT+ +LI G CK+G++  A ++   ++ +         
Sbjct: 564 RKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY 623

Query: 409 --------LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
                    +P+  TY   ++  C+   ++    LL  M  +   P H+ Y  +I G CK
Sbjct: 624 FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             KL EA  +   M   G  P+  TY+++I    K K L  A ++L++M  ++  P    
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y  +IDGLC  G    A  L+  ++E       V YT +I      G V K +    QM 
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803

Query: 581 EKG 583
            KG
Sbjct: 804 AKG 806



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 174/693 (25%), Positives = 299/693 (43%), Gaps = 79/693 (11%)

Query: 8   RTGMVHDAVFVIAKMK-ELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           + G   +A+ +I K + +LD  +  Q  + L       + M D    ++ S    NV T 
Sbjct: 279 KAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAM-DFLSRMRSSSCIPNVVTY 337

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
            I++ G  ++ +L      L     +   PS    N+++  YC+ G    A  L   M  
Sbjct: 338 RILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGD 397

Query: 127 YGLHPDAFSYNILIHG-----------------------------------------LCI 145
            G  P    YNILI G                                         LC 
Sbjct: 398 CGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCG 457

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
           AG  E+A     +M   G  PD  TYS +       S++  A+ + +++      PD+ T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           YT+LI  +C++G +++  K  + M+  G   NV+ Y+ L+ +  K+ ++  A  L   M 
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR----------------ISPNSF 309
           + G  P++VTY+ LI G CK  ++ KA Q+Y  M                      PN F
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            +GA++ GLC+   + EAR   D + +  C  + ++Y+ +IDG+ K+G + EA  ++ ++
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            E+   P++ T++SLI    K+ ++  A ++L  +  +   P+ + YT  ++  C+ G  
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
                L+  ME K   P  VTYT +I G  K  K+ + ++L+  M   G  P+ +TY  +
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I   C    L  A QLL++M         A Y  +I+G   N +   +  LL  + E+  
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVA 875

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
                AY  +I + C  G +  A+    +M       S   Y+ +            D++
Sbjct: 876 VPIIPAYRILIDSFCKAGRLELALELHKEMS------SCTSYSAA------------DKD 917

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +   ++ +      +   FEL A MIK G +P+
Sbjct: 918 LYSSLIESLSLASKVDKAFELYADMIKRGGIPE 950



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 234/525 (44%), Gaps = 26/525 (4%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
            G    A  +I +M          TY+    LL N    D  + L++++K +    +V+T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            +I+ID  C+   LQ A  +  E       P+VV+  A++  Y K      A  LF +ML
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G  P+  +Y  LI G C +G +E+A +    M  +   PD   Y  +  G        
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG-------- 629

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
                         DP+I TY  L+ G C+   V+E   L +VM  +G + N I Y  L+
Sbjct: 630 -----------NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALI 678

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              CK G++DEA  +  +M   G  P++ TYS LI  L K  ++  A+++ + M     +
Sbjct: 679 DGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCA 738

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN   +  ++ GLC+     EA      +    C  +VV Y  MIDG+ K G + + ++L
Sbjct: 739 PNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLEL 798

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
            RQ+  K  +P+ VT+  LI   C  G + DA +LLD +K          Y   +  +  
Sbjct: 799 MRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR 858

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG--VTPDQ 483
           E  I   L LL E+      P    Y ++I   CK  +L+ A++L ++M         D+
Sbjct: 859 EFIIS--LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADK 916

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
             Y+++I S      + KAF+L   M      P  + +  L+ GL
Sbjct: 917 DLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGL 961



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 189/423 (44%), Gaps = 26/423 (6%)

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +VL+   C++G  + AL  L  ++ +G KP  +TY+ L+R   + D++  A  ++ EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIG 360
              + + +  G  +  LC+     EA     +LI     + D V+Y  MI G  +     
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREAL----ALIEKEEFKLDTVIYTQMISGLCEASLFE 316

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+    ++      P++VT+  L+ G  +  ++   +R+L  +   G  PS   + + +
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ--EAVQLLE----DM 474
           +AYC  G+      LL++M      P +V Y ++I G+C   KL   + ++L E    +M
Sbjct: 377 HAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEM 436

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
               V  +++  + + R  C      KA+ ++ +M      P ++TY+ +I  LC    +
Sbjct: 437 LDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKV 496

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-- 592
            NA  L   ++ +++      YT +I + C  G + +A  +F +MV  G   ++  YT  
Sbjct: 497 DNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTAL 556

Query: 593 -------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                           F MMLS G  P+      ++    + G +    ++ A M  +  
Sbjct: 557 IHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNAD 616

Query: 640 LPD 642
           +PD
Sbjct: 617 IPD 619



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 190/389 (48%), Gaps = 15/389 (3%)

Query: 23  KELDLKVSIQTYNSLLYNLRHTDIMWDLY---DDIKVSETPRNVYTNSIVIDGLCQQSRL 79
           K   ++ + Q Y  +  N    D+  D+Y   DD  + +   N++T   ++DGLC+  ++
Sbjct: 597 KSGQIEKACQIYARMRGNADIPDV--DMYFKIDDGNIRDP--NIFTYGALVDGLCKAHKV 652

Query: 80  QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
           ++A   L   + +   P+ +  +A++  +CK+G  + A+ +F  M + G  P+ ++Y+ L
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSL 712

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           I  L     ++ AL+  + M  +   P+ I Y+ +  G   + +   A++++  +  KG 
Sbjct: 713 IDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGC 772

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            P++VTYT +I G+ + G V++ L+L   M ++G   N + Y VL++  C +G +D+A  
Sbjct: 773 HPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQ 832

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           LL EM+       +  Y  +I G  ++  +  ++ L +E+      P   A+  ++   C
Sbjct: 833 LLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFC 890

Query: 320 EKEMITEARMYFDSLIMSNCIQ----DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
           +   +  A        MS+C      D  LY+ +I+       + +A +LY  +I++   
Sbjct: 891 KAGRLELALELHKE--MSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGI 948

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           P +  F  L+ G  +  +  +A +L D I
Sbjct: 949 PELSIFFYLVKGLIRINRWEEALQLSDCI 977



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 133/305 (43%), Gaps = 29/305 (9%)

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN ++  +++   +  A  ++R++ +   +    T    ++  CK G+  +A   L  I+
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA---LALIE 291

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
               +   V YT  ++  CE    +  +  L  M + +  P  VTY +++ G  ++ +L 
Sbjct: 292 KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
              ++L  M   G  P +  +N++I ++C+  D   A++LL +M     +P    YNILI
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411

Query: 526 DGLCVNGDLKNADCLLVSLQEH------NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
            G+C N  L + D L ++ + +      ++ L KV  + + +  C  G   KA +     
Sbjct: 412 GGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSI---- 467

Query: 580 VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                   IR+        M+S GF PD      ++        + + F L   M  + +
Sbjct: 468 --------IRE--------MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV 511

Query: 640 LPDKF 644
           +PD F
Sbjct: 512 VPDVF 516



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 135/322 (41%), Gaps = 70/322 (21%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           DL D + V     N      +IDG C+  +L +A +   + + + +GP+V + ++++ R 
Sbjct: 657 DLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRL 716

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
            K    ++A  +   ML+    P+   Y  +I GLC  G  +EA    + M   G  P+ 
Sbjct: 717 FKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNV 776

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           +TY+ +  GF    ++    ++++++  KG  P+ VTY VLI   C  G +++  +L + 
Sbjct: 777 VTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836

Query: 229 M--------------LSQGFKLNVI-------------------AYSVLLSSMCKSGRID 255
           M              + +GF    I                   AY +L+ S CK+GR++
Sbjct: 837 MKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896

Query: 256 EALGLLYEMEAV-------------------------------------GLKPDLVTYSI 278
            AL L  EM +                                      G  P+L  +  
Sbjct: 897 LALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFY 956

Query: 279 LIRGLCKQDKVHKAIQLYNEMC 300
           L++GL + ++  +A+QL + +C
Sbjct: 957 LVKGLIRINRWEEALQLSDCIC 978



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 143/351 (40%), Gaps = 53/351 (15%)

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY------------------ 386
           L N++I    + G    A++   +L +    PS +T+N+L+                   
Sbjct: 199 LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREM 258

Query: 387 ---GFCKNG-----------KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
              GF  +G           K    R  L  I+    +   V YT  ++  CE    +  
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEA 318

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           +  L  M + +  P  VTY +++ G  ++ +L    ++L  M   G  P +  +N++I +
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH----- 547
           +C+  D   A++LL +M     +P    YNILI G+C N  L + D L ++ + +     
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLD 438

Query: 548 -NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKS------------ 594
            ++ L KV  + + +  C  G   KA +   +M+ KGF      Y+K             
Sbjct: 439 AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDN 498

Query: 595 ---FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
               F  M SN   PD     +++ +F + G L    +    M++ G  P+
Sbjct: 499 AFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 18/211 (8%)

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            V+I+  C+      A++ L  +  +G  P ++TYN ++R F +   L  A+ +  +M  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
                   T    +  LC  G  + A   L  +++    L  V YT +I   C      +
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREA---LALIEKEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 572 AMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLI 616
           AM F  +M       ++  Y                K    MM++ G  P + I   ++ 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           A+ + GD    ++L   M   G  P   + N
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYN 408


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 234/459 (50%), Gaps = 4/459 (0%)

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           D  + NI I+ LC              M + G+EP  +T + +  G  +   ++ A  ++
Sbjct: 109 DVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLV 168

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           +K+   G   +  TY  L+ G C+IG+    L+  + M+ +    NV+ Y+ +L  +CK 
Sbjct: 169 EKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKR 228

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ-DKVHKAIQLYNEMCSKR-ISPNSF 309
           G + EALGLL+EM  V ++P++VTY+ LI+GLC +     + + L+NEM +++ I P+  
Sbjct: 229 GLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQ 288

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
               ++ G C++ ++  A      ++      +VV YN +I GY     + EA++++  +
Sbjct: 289 TFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLM 348

Query: 370 IEKRIS--PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           + +     PS+VT NSLI+G+CK  +V  A  LL  +   GL+P   T+T+ +  +CE  
Sbjct: 349 VREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVK 408

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
                  L   M+     P   T  VV+ GL K W   EAV L   M   G+  D + YN
Sbjct: 409 KPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYN 468

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++   CK   L  A +LL+ + +  L+  S TYNI+I GLC  G L +A+ LL  ++E+
Sbjct: 469 IMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKEN 528

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
                K +Y   ++    + D+ ++  +   M +KGF +
Sbjct: 529 GCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPV 567



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 242/469 (51%), Gaps = 26/469 (5%)

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           K+   P  V  N+IV +GLC +  +  A+  +++     +  +  +  A+++  CK+G  
Sbjct: 138 KIGLEPTLVTLNTIV-NGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIG-- 194

Query: 115 EVAKGLFCL--MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
           + +  L CL  M+K  L P+   YN ++ GLC  G + EAL   ++MG   VEP+ +TY+
Sbjct: 195 DTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYN 254

Query: 173 ILAKGFHLLSQISGAWK-----VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            L +G   L    G W+       + +  KG  PD+ T+++L+ G+C+     EGL LR 
Sbjct: 255 CLIQG---LCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCK-----EGLLLRA 306

Query: 228 -----VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM--EAVGLKPDLVTYSILI 280
                 M+  G + NV+ Y+ L++  C   +++EA+ +   M  E  G  P +VT++ LI
Sbjct: 307 ESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLI 366

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
            G CK  +V KA+ L +EM  K + P+ F   +++ G CE +    AR  F ++     +
Sbjct: 367 HGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQV 426

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            ++    +++DG +K     EAV L+R +++  +   IV +N ++ G CK GK+ DAR+L
Sbjct: 427 PNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKL 486

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L  + + GL+  + TY   +   C EG +     LL++M+     P   +Y V ++GL +
Sbjct: 487 LSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLR 546

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           ++ +  + + L+ M   G   D  T   +IR F    +  K+F+   Q+
Sbjct: 547 KYDIARSRKYLQIMKDKGFPVDATTAELLIR-FLSANEEDKSFKEFPQI 594



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 218/451 (48%), Gaps = 36/451 (7%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIV 69
           G V+ A++++ KM+ L    + +TY +L                                
Sbjct: 159 GDVNHALWLVEKMENLGYHCNARTYGAL-------------------------------- 186

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           ++GLC+      A+  L++   +  GP+VV  NAI+   CK G    A GL   M    +
Sbjct: 187 VNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNV 246

Query: 130 HPDAFSYNILIHGLCIA-GSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLLSQISGA 187
            P+  +YN LI GLC   G   E +   N+M    G+ PD  T+SIL  GF     +  A
Sbjct: 247 EPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRA 306

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--NVIAYSVLL 245
             V+  ++  G +P++VTY  LI GYC    +EE +++  +M+ +G     +V+ ++ L+
Sbjct: 307 ESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLI 366

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              CK   +D+A+ LL EM   GL PD+ T++ LI G C+  K   A +L+  M      
Sbjct: 367 HGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQV 426

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN      +L GL +  + +EA   F +++ S    D+V+YNIM+DG  K+G + +A +L
Sbjct: 427 PNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKL 486

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
              ++ K +     T+N +I G C+ G + DA  LL  +K +G  P+  +Y  F+     
Sbjct: 487 LSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLR 546

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           + +I R    LQ M+ K       T  ++I+
Sbjct: 547 KYDIARSRKYLQIMKDKGFPVDATTAELLIR 577



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 222/478 (46%), Gaps = 39/478 (8%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           V +LN  ++  C +    +   +  LM K GL P   + N +++GLCI G +  AL    
Sbjct: 110 VCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVE 169

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            M   G   +A TY  L  G   +   SGA + ++K++ +   P++V Y  ++ G C+ G
Sbjct: 170 KMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRG 229

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS-GRIDEALGLLYEMEA-VGLKPDLVT 275
            V E L L   M     + NV+ Y+ L+  +C   G   E +GL  EM A  G+ PD+ T
Sbjct: 230 LVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQT 289

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           +SIL+ G CK+  + +A  +   M    + PN   + +++ G C +  + EA   F  ++
Sbjct: 290 FSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMV 349

Query: 336 MSN--CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
                C+  VV +N +I G+ K+  + +A+ L  +++ K + P + T+ SLI GFC+  K
Sbjct: 350 REGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKK 409

Query: 394 VADARRLLDTIKLHG-------------------LEPSAVT----------------YTT 418
              AR L  T+K HG                   L+  AVT                Y  
Sbjct: 410 PLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNI 469

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++  C+ G +     LL  +  K +     TY ++IKGLC++  L +A +LL  M   G
Sbjct: 470 MLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENG 529

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
             P++ +YN  ++   +  D+ ++ + L  M        + T  +LI  L  N + K+
Sbjct: 530 CPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIRFLSANEEDKS 587



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 223/499 (44%), Gaps = 57/499 (11%)

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           + ++AK  H  + IS   K++  L       D+ T  + I   C +     G  +  +M 
Sbjct: 81  FGLVAKSQHYATAIS-LIKILHSL--GDGSADVCTLNIAINCLCHMRKTTLGFAVLGLMT 137

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
             G +  ++  + +++ +C  G ++ AL L+ +ME +G   +  TY  L+ GLCK     
Sbjct: 138 KIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTS 197

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A++   +M  + + PN   + AIL GLC++ ++ EA      + + N   +VV YN +I
Sbjct: 198 GALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLI 257

Query: 351 DGYV-KLGNIGEAVQLYRQLI-EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
            G   + G   E V L+ +++ EK I P + TF+ L+ GFCK G +  A  ++  +   G
Sbjct: 258 QGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIG 317

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG--PTHVTYTVVIKGLCKQWKLQE 466
           +EP+ VTY + +  YC    ++  + +   M  +  G  P+ VT+  +I G CK  ++ +
Sbjct: 318 VEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDK 377

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT------ 520
           A+ LL +M   G+ PD  T+ ++I  FC+ K    A +L   M  H   P   T      
Sbjct: 378 AMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLD 437

Query: 521 -----------------------------YNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
                                        YNI++DG+C  G L +A  LL  +    + +
Sbjct: 438 GLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKI 497

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS-----------IRDY----TKSFF 596
               Y  +IK  C EG +  A     +M E G   +           +R Y    ++ + 
Sbjct: 498 DSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYL 557

Query: 597 CMMLSNGFPPDQEICEVML 615
            +M   GFP D    E+++
Sbjct: 558 QIMKDKGFPVDATTAELLI 576



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 204/432 (47%), Gaps = 31/432 (7%)

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +V   ++ ++ +C   +      +L  M  +GL+P LVT + ++ GLC +  V+ A+ L 
Sbjct: 109 DVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLV 168

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M +     N+  +GA++ GLC+    + A      ++  N   +VV+YN ++DG  K 
Sbjct: 169 EKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKR 228

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL----DTIKLHGLEPS 412
           G +GEA+ L  ++    + P++VT+N LI G C  G+    R  +    + +   G+ P 
Sbjct: 229 GLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLC--GEFGGWREGVGLFNEMVAEKGIVPD 286

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             T++  ++ +C+EG + R  +++  M    + P  VTY  +I G C + +++EA+++  
Sbjct: 287 VQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFG 346

Query: 473 DMYV--IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
            M     G  P  +T+N++I  +CK K++ KA  LL++M    L+P   T+  LI G C 
Sbjct: 347 LMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCE 406

Query: 531 NGDLKNADCLLVSLQEH----NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
                 A  L  +++EH    N+    V    ++K         +A+T F  M++ G ++
Sbjct: 407 VKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDS----EAVTLFRAMMKSGLDL 462

Query: 587 SIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
            I  Y                +     +L  G   D     +M+    + G L    EL 
Sbjct: 463 DIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELL 522

Query: 632 AVMIKSGLLPDK 643
             M ++G  P+K
Sbjct: 523 RKMKENGCPPNK 534



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 176/334 (52%), Gaps = 13/334 (3%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW----DLYDDIKVSE--TPR 61
           + G+V +A+ ++ +M  ++++ ++ TYN L+  L      W     L++++   +   P 
Sbjct: 227 KRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVP- 285

Query: 62  NVYTNSIVIDGLCQQSRL--QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           +V T SI++DG C++  L   ++++      G E  P+VV+ N++++ YC     E A  
Sbjct: 286 DVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVE--PNVVTYNSLIAGYCLRSQMEEAMR 343

Query: 120 LFCLMLK--YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           +F LM++   G  P   ++N LIHG C    +++A+   ++M   G++PD  T++ L  G
Sbjct: 344 VFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGG 403

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F  + +   A ++   +   G  P++ T  V++ G  +     E + L   M+  G  L+
Sbjct: 404 FCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLD 463

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           ++ Y+++L  MCK G++++A  LL  +   GLK D  TY+I+I+GLC++  +  A +L  
Sbjct: 464 IVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLR 523

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           +M      PN  ++   + GL  K  I  +R Y 
Sbjct: 524 KMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYL 557



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 6/257 (2%)

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE-KRISPSIVTFNSLIYGFCKNGKVADA 397
           CIQD   +N++     K  +   A+ L + L      S  + T N  I   C   K    
Sbjct: 73  CIQD---FNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLG 129

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             +L  +   GLEP+ VT  T +N  C EG++   L L+++ME         TY  ++ G
Sbjct: 130 FAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNG 189

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LCK      A++ L+ M    + P+ + YN I+   CK   + +A  LL++M + N+EP 
Sbjct: 190 LCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPN 249

Query: 518 SATYNILIDGLC--VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
             TYN LI GLC    G  +        + E  I      ++ ++   C EG + +A + 
Sbjct: 250 VVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESV 309

Query: 576 FCQMVEKGFEISIRDYT 592
              MV  G E ++  Y 
Sbjct: 310 VGFMVRIGVEPNVVTYN 326


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 238/458 (51%), Gaps = 3/458 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS++    +++   K+   +V   L   +   G+  D ++ N+L++  C +     A  F
Sbjct: 69  PSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSF 128

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              + + G EPD  T++ L  GF L ++I  A  ++ +++  G  PD+V YT +I   C+
Sbjct: 129 LGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCK 188

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G+V+  L L   M + G + +V+ Y+ L++ +C SGR  +A  LL  M    +KPD++T
Sbjct: 189 NGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVIT 248

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ LI    K+ K+  A +LYNEM    I+PN F + +++ GLC +  + EAR  F  + 
Sbjct: 249 FNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLME 308

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C  DVV Y  +I+G+ K   + +A++++ ++ +K ++ + +T+ +LI GF   GK  
Sbjct: 309 TKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPN 368

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG---PTHVTYT 452
            A+ +   +   G+ P+  TY   ++  C  G + + L + ++M+ + I    P   TY 
Sbjct: 369 VAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYN 428

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
           V++ GLC   KL++A+ +  DM    +    ITY  II+  CK   ++ A  L   +   
Sbjct: 429 VLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSK 488

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
            ++P   TY  +I GL   G +  A  L   ++E  +S
Sbjct: 489 GVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 225/446 (50%), Gaps = 3/446 (0%)

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
            EAL+  + M      P  I ++ L      + +      + + L I G   D+ T  +L
Sbjct: 53  NEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLL 112

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           +  +CQ             ++  GF+ ++  ++ L++  C   RI+EA+ ++ +M  +G+
Sbjct: 113 MNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGI 172

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           KPD+V Y+ +I  LCK   V  A+ L+N+M +  I P+   + +++ GLC      +A +
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADL 232

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               ++      DV+ +N +ID +VK G + +A +LY ++I+  I+P+I T+ SLI G C
Sbjct: 233 LLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLC 292

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
             G++ +AR++   ++  G  P  V YT+ +N +C+   ++  + +  EM  K +    +
Sbjct: 293 MEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTI 352

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           TYT +I+G     K   A ++   M   GV P+  TYN ++   C    + KA  +   M
Sbjct: 353 TYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDM 412

Query: 510 WLHNLE---PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
               ++   P   TYN+L+ GLC NG L+ A  +   +Q+ ++ +  + YT II+  C  
Sbjct: 413 QKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKA 472

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYT 592
           G V  A+  FC +  KG + ++  YT
Sbjct: 473 GKVKDALNLFCSLPSKGVKPNVVTYT 498



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 232/476 (48%), Gaps = 4/476 (0%)

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           L F E A  LF  M++    P    +  L++ +      +  +     +   GV  D  T
Sbjct: 50  LQFNE-ALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYT 108

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
            ++L   F   SQ   A   + KL+  G +PDI T+T LI G+C    +EE + +   M+
Sbjct: 109 CNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMV 168

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
             G K +V+ Y+ ++ S+CK+G +D AL L  +ME  G++PD+V Y+ L+ GLC   +  
Sbjct: 169 EMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWR 228

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
            A  L   M  ++I P+     A++    ++  + +A+  ++ +I  +   ++  Y  +I
Sbjct: 229 DADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLI 288

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           +G    G + EA Q++  +  K   P +V + SLI GFCK  KV DA ++   +   GL 
Sbjct: 289 NGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLT 348

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
            + +TYTT +  +   G       +   M ++ + P   TY V++  LC   K+ +A+ +
Sbjct: 349 GNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMI 408

Query: 471 LEDMY---VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
            EDM    + GV P+  TYN ++   C    L KA  +   M   +++    TY I+I G
Sbjct: 409 FEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQG 468

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +C  G +K+A  L  SL    +    V YTT+I     EG + +A   F +M E G
Sbjct: 469 MCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 227/452 (50%), Gaps = 11/452 (2%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           +++  ++  D++ +L   +++     ++YT +++++  CQ S+   A  FL +     F 
Sbjct: 79  NVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFE 138

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P + +  ++++ +C     E A  +   M++ G+ PD   Y  +I  LC  G ++ AL  
Sbjct: 139 PDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSL 198

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK----VIQKLLIKGSDPDIVTYTVLIC 211
            N M  +G+ PD + Y+ L  G       SG W+    +++ ++ +   PD++T+  LI 
Sbjct: 199 FNQMENYGIRPDVVMYTSLVNGLC----NSGRWRDADLLLRGMMKRKIKPDVITFNALID 254

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
            + + G + +  +L   M+      N+  Y+ L++ +C  GR+DEA  + Y ME  G  P
Sbjct: 255 AFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFP 314

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
           D+V Y+ LI G CK  KV  A++++ EM  K ++ N+  +  ++ G         A+  F
Sbjct: 315 DVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVF 374

Query: 332 DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS---PSIVTFNSLIYGF 388
             ++      ++  YN+++      G + +A+ ++  + ++ I    P+I T+N L++G 
Sbjct: 375 GHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGL 434

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C NGK+  A  +   ++   ++   +TYT  +   C+ G ++  L L   + +K + P  
Sbjct: 435 CYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNV 494

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           VTYT +I GL ++  + EA  L   M   GV+
Sbjct: 495 VTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 161/358 (44%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y  +L +   S + +EAL L   M      P ++ ++ L+  + K  K    I L   + 
Sbjct: 39  YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
              +S + +    ++   C+      A  +   L+      D+  +  +I+G+     I 
Sbjct: 99  IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EA+ +  Q++E  I P +V + ++I   CKNG V +A  L + ++ +G+ P  V YT+ +
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N  C  G  +    LL+ M  + I P  +T+  +I    K+ KL +A +L  +M  + + 
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIA 278

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+  TY ++I   C    L +A Q+   M      P    Y  LI+G C    +++A  +
Sbjct: 279 PNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKI 338

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
              + +  ++   + YTT+I+     G  + A   F  MV +G   +IR Y     C+
Sbjct: 339 FYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCL 396


>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
 gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
          Length = 901

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 235/497 (47%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS      ++  Y K G    A+  F  M   G+ P+AF +  L+H   +A  M  AL  
Sbjct: 262 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 321

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M   G+E   +TYSIL  GF  ++    A  + ++   K S  + + Y+ +I  +CQ
Sbjct: 322 VEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQ 381

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            GN+E   +L   M   G    +  Y  ++         ++ L +   ++  G KP +++
Sbjct: 382 SGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIIS 441

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y  L+    K  KV KA+ +  EM S  I  N+  +  ++ G         A   F+ ++
Sbjct: 442 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 501

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            S    D  +YN++I+ + K+GN+  A+ +  ++ ++R+ PS   F  +I G+   G + 
Sbjct: 502 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 561

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A   LD ++  G  P+ +TY   ++    +  +QR +++L +M    I P   TYT+++
Sbjct: 562 SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 621

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           +G      + +A +    +   G+  D   Y T++R+ CK   ++ A  +  +M    + 
Sbjct: 622 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 681

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
             +  YNILIDG    GD+  A+ L+  ++E  +      YT+ I A C  GD+ +A   
Sbjct: 682 RNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKV 741

Query: 576 FCQMVEKGFEISIRDYT 592
             +MV+ G + +++ YT
Sbjct: 742 IEEMVDVGLKPNVKTYT 758



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 139/555 (25%), Positives = 258/555 (46%), Gaps = 41/555 (7%)

Query: 3   AFVYSRTGMVH---------DAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDL 50
           AFV+  T +VH          A+  + +MK   L+++I TY+ L+     +  +    +L
Sbjct: 299 AFVF--TSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNL 356

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           + + K   +  N    S +I   CQ   ++ A   ++E         +   +++M  Y  
Sbjct: 357 FKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTI 416

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           +        +F  + + G  P   SY  L++     G + +AL  + +M   G++ +  T
Sbjct: 417 IQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKT 476

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           YS+L  GF  L   + A+ + +++L  G  PD   Y +LI  +C++GN++  + + E M 
Sbjct: 477 YSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQ 536

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +  + +  A+  ++     +G +  AL  L  M   G  P ++TY+ LI GL ++ KV 
Sbjct: 537 KERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQ 596

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A+ + ++M    I+PN   +  I+ G      I +A  YF  +  S    DV +Y  ++
Sbjct: 597 RAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 656

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
               K G +  A+ + R++  ++I  +   +N LI G+ + G V +A  L+  +K  G+ 
Sbjct: 657 RACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVP 716

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+  TYT+++NA C+ G++QR   +++EM    + P   TYT +IKG  +      A++ 
Sbjct: 717 PNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKC 776

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCK----------------CK---------DLRKAFQL 505
            E+M + G+ PD+ +Y+ ++ S                   C+         DLR A   
Sbjct: 777 FEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVHW 836

Query: 506 LNQMWLHNLEPTSAT 520
               WLH +E T   
Sbjct: 837 --SRWLHKIERTGGA 849



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 139/582 (23%), Positives = 259/582 (44%), Gaps = 18/582 (3%)

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           +++++      N +  + ++        ++ A+  ++E   +    ++V+ + ++S + K
Sbjct: 287 FENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAK 346

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           +  ++ A  LF          +   Y+ +IH  C +G+ME A E   +M   G++     
Sbjct: 347 INDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDV 406

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y  +  G+ ++   +    V ++L   G  P I++Y  L+  Y +IG V + L + + M 
Sbjct: 407 YHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEME 466

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           S G K N   YS+L++          A  +  EM   GL+PD   Y++LI   CK   + 
Sbjct: 467 SCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMD 526

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +AI +  +M  +R+ P++ A   I+ G      +  A    D +  S C+  V+ YN +I
Sbjct: 527 RAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALI 586

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            G V+   +  AV +  ++    I+P+  T+  ++ G+  +G +  A      IK  GL+
Sbjct: 587 HGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLK 646

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
                Y T + A C+ G +Q  LA+ +EM  + I      Y ++I G  ++  + EA  L
Sbjct: 647 LDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDL 706

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC- 529
           ++ M   GV P+  TY + I + CK  D+++A +++ +M    L+P   TY  LI G   
Sbjct: 707 MKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWAR 766

Query: 530 VNGDLKNADCL----LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC-QMVEKGF 584
           V+   +   C     L  L+    S   +  + + +A   EG  +  +   C +M E   
Sbjct: 767 VSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDL 826

Query: 585 EISIR------------DYTKSFFCMMLSNGFPPDQEICEVM 614
            + +R            + T       L   FPPD    E +
Sbjct: 827 TVDLRTAVHWSRWLHKIERTGGALTEALQRIFPPDWNSLEFL 868



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/470 (22%), Positives = 207/470 (44%), Gaps = 15/470 (3%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W+ +     +   P    + ++I  Y + G+        E M ++G + N   ++ L+ +
Sbjct: 249 WQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHA 308

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
              +  +  AL  + EM++ GL+  +VTYSILI G  K +    A  L+ E  +K  S N
Sbjct: 309 YAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLN 368

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  I+   C+   +  A      +        + +Y+ M+ GY  + N  + + ++ 
Sbjct: 369 GIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFE 428

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           +L E    PSI+++  L+  + K GKVA A  +   ++  G++ +  TY+  +N +    
Sbjct: 429 RLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLH 488

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           +     A+ +EM    + P    Y ++I+  CK   +  A+ +LE M    + P    + 
Sbjct: 489 DFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFR 548

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            II  +    D++ A   L+ M      PT  TYN LI GL     ++ A  +L  +   
Sbjct: 549 PIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIA 608

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------------KSF 595
            I+  +  YT I++ + A GD+ KA  +F ++ E G ++ +  Y             +S 
Sbjct: 609 GITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSA 668

Query: 596 FCMMLSNGF---PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             +     F   P +  I  +++  + + GD+    +L   M + G+ P+
Sbjct: 669 LAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPN 718



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 133/292 (45%), Gaps = 3/292 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVS 57
           +L   + + G +  A+ ++ KM++  ++ S + +  ++        M    D  D ++ S
Sbjct: 514 LLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRS 573

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
                V T + +I GL ++ ++Q A+  L + +     P+  +   IM  Y   G    A
Sbjct: 574 GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKA 633

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              F  + + GL  D + Y  L+   C +G M+ AL  T +M    +  +   Y+IL  G
Sbjct: 634 FEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDG 693

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +     +  A  +++++   G  P+I TYT  I   C+ G+++   K+ E M+  G K N
Sbjct: 694 WARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPN 753

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           V  Y+ L+    +    D AL    EM+  GLKPD  +Y  L+  L  +  V
Sbjct: 754 VKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATV 805



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 145/304 (47%), Gaps = 40/304 (13%)

Query: 361 EAVQLYRQLIEKRI--------------SPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           EA + +R+++E R                PS   F  +I  + K G    AR   + ++ 
Sbjct: 233 EACREFRRVVESRPDNWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRA 292

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+EP+A  +T+ ++AY    +++  L+ ++EM+++ +  T VTY+++I G  K    Q 
Sbjct: 293 RGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQS 352

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A  L ++      + + I Y+ II + C+  ++ +A +L+ +M    ++     Y+ ++ 
Sbjct: 353 ADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMH 412

Query: 527 GLCVNGDLKNAD-CLLV--SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           G  +   ++N + CL+V   L+E     + ++Y  ++  +   G V KA++   +M   G
Sbjct: 413 GYTI---IQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCG 469

Query: 584 FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
            + + + Y+      ML NGF           I  H   D  + F +   M++SGL PD+
Sbjct: 470 IKHNNKTYS------MLINGF-----------IHLH---DFANAFAIFEEMLRSGLQPDR 509

Query: 644 FLIN 647
            + N
Sbjct: 510 AIYN 513


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 231/474 (48%), Gaps = 1/474 (0%)

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
           +  ++  + ++G    A G+   M   GL P + + N ++      G +E A    ++M 
Sbjct: 150 MRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMS 209

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
             GV PD+ +Y ++  G     +I  A + +  ++ +G  PD  T T+++   C+ G V 
Sbjct: 210 VRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVN 269

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
             +     M+  GFK N+I ++ L+  +CK G I +A  +L EM   G KP++ T++ LI
Sbjct: 270 RAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 329

Query: 281 RGLCKQDKVHKAIQLYNEMC-SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
            GLCK+    KA +L+ ++  S    PN   + +++ G C+++ +  A M F  +     
Sbjct: 330 DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 389

Query: 340 IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
             +V  Y  +I+G+ K G+ G A +L   + ++   P+I T+N+ I   CK  +  +A  
Sbjct: 390 FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYE 449

Query: 400 LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
           LL+     GLE   VTYT  +   C++ +I + LA    M             ++I   C
Sbjct: 450 LLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFC 509

Query: 460 KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
           +Q K++E+ +L + +  +G+ P + TY ++I  +CK  D+  A +  + M  H   P S 
Sbjct: 510 RQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSF 569

Query: 520 TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           TY  LI GLC    +  A  L  ++ +  +S  +V   T+   +C   D   AM
Sbjct: 570 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM 623



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 138/546 (25%), Positives = 244/546 (44%), Gaps = 48/546 (8%)

Query: 78  RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
           RL +A+  + +   +   PS +++N ++    +LG  E A+ +F  M   G+ PD+ SY 
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 221

Query: 138 ILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIK 197
           +++ G    G ++EA  +   M + G  PD  T +++         ++ A    +K++  
Sbjct: 222 LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 281

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG----- 252
           G  P+++ +T LI G C+ G++++  ++ E M+  G+K NV  ++ L+  +CK G     
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341

Query: 253 -------------------------------RIDEALGLLYEMEAVGLKPDLVTYSILIR 281
                                          +++ A  L   M+  GL P++ TY+ LI 
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           G CK     +A +L N M  +   PN + + A +  LC+K    EA    +         
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D V Y I+I    K  +I +A+  + ++ +      +   N LI  FC+  K+ ++ RL 
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +   GL P+  TYT+ ++ YC+EG+I   L     M+     P   TY  +I GLCK+
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL----NQMWLHNLEPT 517
             + EA +L E M   G++P ++T  T+   +CK  D   A  LL     ++W+      
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIR----- 636

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             T   L+  LC    +  A      L E + S  +V       A C+E   +  +T   
Sbjct: 637 --TVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTA-CSESGKNNLVTDLT 693

Query: 578 QMVEKG 583
           + + +G
Sbjct: 694 ERISRG 699



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 219/439 (49%), Gaps = 1/439 (0%)

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G + EA+    DM   G+ P +IT + + +    L  I  A  V  ++ ++G  PD  +Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            +++ G  + G ++E  +    M+ +GF  +    +++L+++C++G ++ A+    +M  
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
           +G KP+L+ ++ LI GLCK+  + +A ++  EM      PN + H A++ GLC++    +
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340

Query: 327 ARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
           A   F  L+ S+  + +V  Y  MI GY K   +  A  L+ ++ E+ + P++ T+ +LI
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G CK G    A  L++ +   G  P+  TY   +++ C++        LL +  +  + 
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
              VTYT++I+  CKQ  + +A+     M   G   D    N +I +FC+ K ++++ +L
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 520

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
              +    L PT  TY  +I   C  GD+  A     +++ H        Y ++I   C 
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 580

Query: 566 EGDVHKAMTFFCQMVEKGF 584
           +  V +A   +  M+++G 
Sbjct: 581 KSMVDEACKLYEAMIDRGL 599



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 201/417 (48%), Gaps = 16/417 (3%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +L +  + GR++EA+G++ +M+  GL P  +T + ++    +   +  A  +++EM  + 
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P+S ++  +++G      I EA  +   +I    I D     +++    + G +  A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
             +R++I+    P+++ F SLI G CK G +  A  +L+ +  +G +P+  T+T  ++  
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332

Query: 424 CEEGNIQRLLAL-LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           C+ G  ++   L L+ + +    P   TYT +I G CK+ KL  A  L   M   G+ P+
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             TY T+I   CK     +A++L+N M      P   TYN  ID LC       A  LL 
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR------------- 589
                 +    V YT +I+  C + D+++A+ FFC+M + GFE  +R             
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512

Query: 590 --DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
               ++  F +++S G  P +E    M+  + + GD+    +    M + G +PD F
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSF 569



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 226/473 (47%), Gaps = 4/473 (0%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           +S  G +++AV ++  M+   L  S  T N +L     L   +   +++D++ V     +
Sbjct: 157 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 216

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
             +  +++ G  +  ++Q+A  +L     + F P   +   I++  C+ G    A   F 
Sbjct: 217 SSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR 276

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M+  G  P+  ++  LI GLC  GS+++A E   +M R+G +P+  T++ L  G     
Sbjct: 277 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 336

Query: 183 QISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
               A+++  KL+   +  P++ TYT +I GYC+   +     L   M  QG   NV  Y
Sbjct: 337 WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 396

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L++  CK+G    A  L+  M   G  P++ TY+  I  LCK+ +  +A +L N+  S
Sbjct: 397 TTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFS 456

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             +  +   +  ++   C++  I +A  +F  +  +    D+ L NI+I  + +   + E
Sbjct: 457 CGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 516

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           + +L++ ++   + P+  T+ S+I  +CK G +  A +    +K HG  P + TY + ++
Sbjct: 517 SERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 576

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
             C++  +     L + M  + + P  VT   +    CK+     A+ LLE +
Sbjct: 577 GLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL 629



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 211/441 (47%), Gaps = 8/441 (1%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYT 65
            G+V+ A++   KM +L  K ++  + SL+  L     +   +++ +++  +    NVYT
Sbjct: 265 NGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYT 324

Query: 66  NSIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           ++ +IDGLC++   + A  LFL+      + P+V +  +++  YCK      A+ LF  M
Sbjct: 325 HTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM 384

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + GL P+  +Y  LI+G C AGS   A E  N MG  G  P+  TY+         S+ 
Sbjct: 385 KEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRA 444

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A++++ K    G + D VTYT+LI   C+  ++ + L     M   GF+ ++   ++L
Sbjct: 445 PEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNIL 504

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +++ C+  ++ E+  L   + ++GL P   TY+ +I   CK+  +  A++ ++ M     
Sbjct: 505 IAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGC 564

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+SF +G+++ GLC+K M+ EA   ++++I        V    +   Y K  +   A+ 
Sbjct: 565 VPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMI 624

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L   L +K     I T  +L+   C   KV  A      +         VT   F  A C
Sbjct: 625 LLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTA-C 680

Query: 425 EEGNIQRLLALLQEMETKAIG 445
            E     L+  L E  ++ +G
Sbjct: 681 SESGKNNLVTDLTERISRGVG 701



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 91/197 (46%), Gaps = 20/197 (10%)

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
           H     +++   +  +L EAV ++ DM   G+TP  IT N ++    +   +  A  + +
Sbjct: 147 HEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFD 206

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M +  + P S++Y +++ G   +G ++ AD  L  + +          T I+ A C  G
Sbjct: 207 EMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG 266

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
            V++A+ +F +M++ GF+ ++ ++T                     ++    + G +   
Sbjct: 267 LVNRAIWYFRKMIDLGFKPNLINFTS--------------------LIDGLCKKGSIKQA 306

Query: 628 FELAAVMIKSGLLPDKF 644
           FE+   M+++G  P+ +
Sbjct: 307 FEMLEEMVRNGWKPNVY 323


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 231/474 (48%), Gaps = 1/474 (0%)

Query: 101  LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
            +  ++  + ++G    A G+   M   GL P + + N ++      G +E A    ++M 
Sbjct: 751  MRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMS 810

Query: 161  RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
              GV PD+ +Y ++  G     +I  A + +  ++ +G  PD  T T+++   C+ G V 
Sbjct: 811  VRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVN 870

Query: 221  EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
              +     M+  GFK N+I ++ L+  +CK G I +A  +L EM   G KP++ T++ LI
Sbjct: 871  RAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 930

Query: 281  RGLCKQDKVHKAIQLYNEMC-SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC 339
             GLCK+    KA +L+ ++  S    PN   + +++ G C+++ +  A M F  +     
Sbjct: 931  DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 990

Query: 340  IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR 399
              +V  Y  +I+G+ K G+ G A +L   + ++   P+I T+N+ I   CK  +  +A  
Sbjct: 991  FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYE 1050

Query: 400  LLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLC 459
            LL+     GLE   VTYT  +   C++ +I + LA    M             ++I   C
Sbjct: 1051 LLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFC 1110

Query: 460  KQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA 519
            +Q K++E+ +L + +  +G+ P + TY ++I  +CK  D+  A +  + M  H   P S 
Sbjct: 1111 RQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSF 1170

Query: 520  TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
            TY  LI GLC    +  A  L  ++ +  +S  +V   T+   +C   D   AM
Sbjct: 1171 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM 1224



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 245/546 (44%), Gaps = 48/546 (8%)

Query: 78   RLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYN 137
            RL +A+  + +   +   PS +++N ++    +LG  E A+ +F  M   G+ PD+ SY 
Sbjct: 763  RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 822

Query: 138  ILIHG-----------------------------------LCIAGSMEEALEFTNDMGRH 162
            +++ G                                   LC  G +  A+ +   M   
Sbjct: 823  LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 882

Query: 163  GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
            G +P+ I ++ L  G      I  A++++++++  G  P++ T+T LI G C+ G  E+ 
Sbjct: 883  GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 942

Query: 223  LKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
             +L  +++ S  +K NV  Y+ ++   CK  +++ A  L   M+  GL P++ TY+ LI 
Sbjct: 943  FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 1002

Query: 282  GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
            G CK     +A +L N M  +   PN + + A +  LC+K    EA    +         
Sbjct: 1003 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 1062

Query: 342  DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
            D V Y I+I    K  +I +A+  + ++ +      +   N LI  FC+  K+ ++ RL 
Sbjct: 1063 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 1122

Query: 402  DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
              +   GL P+  TYT+ ++ YC+EG+I   L     M+     P   TY  +I GLCK+
Sbjct: 1123 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 1182

Query: 462  WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL----NQMWLHNLEPT 517
              + EA +L E M   G++P ++T  T+   +CK  D   A  LL     ++W+      
Sbjct: 1183 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIR----- 1237

Query: 518  SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
              T   L+  LC    +  A      L E + S  +V       A C+E   +  +T   
Sbjct: 1238 --TVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTA-CSESGKNNLVTDLT 1294

Query: 578  QMVEKG 583
            + + +G
Sbjct: 1295 ERISRG 1300



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 219/438 (50%), Gaps = 1/438 (0%)

Query: 147  GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
            G + EA+    DM   G+ P +IT + + +    L  I  A  V  ++ ++G  PD  +Y
Sbjct: 762  GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 821

Query: 207  TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             +++ G  + G ++E  +    M+ +GF  +    +++L+++C++G ++ A+    +M  
Sbjct: 822  KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 881

Query: 267  VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            +G KP+L+ ++ LI GLCK+  + +A ++  EM      PN + H A++ GLC++    +
Sbjct: 882  LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 941

Query: 327  ARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
            A   F  L+ S+  + +V  Y  MI GY K   +  A  L+ ++ E+ + P++ T+ +LI
Sbjct: 942  AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 1001

Query: 386  YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
             G CK G    A  L++ +   G  P+  TY   +++ C++        LL +  +  + 
Sbjct: 1002 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 1061

Query: 446  PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
               VTYT++I+  CKQ  + +A+     M   G   D    N +I +FC+ K ++++ +L
Sbjct: 1062 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 1121

Query: 506  LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCA 565
               +    L PT  TY  +I   C  GD+  A     +++ H        Y ++I   C 
Sbjct: 1122 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 1181

Query: 566  EGDVHKAMTFFCQMVEKG 583
            +  V +A   +  M+++G
Sbjct: 1182 KSMVDEACKLYEAMIDRG 1199



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 201/417 (48%), Gaps = 16/417 (3%)

Query: 244  LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
            +L +  + GR++EA+G++ +M+  GL P  +T + ++    +   +  A  +++EM  + 
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 304  ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            + P+S ++  +++G      I EA  +   +I    I D     +++    + G +  A+
Sbjct: 814  VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873

Query: 364  QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
              +R++I+    P+++ F SLI G CK G +  A  +L+ +  +G +P+  T+T  ++  
Sbjct: 874  WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933

Query: 424  CEEGNIQRLLAL-LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+ G  ++   L L+ + +    P   TYT +I G CK+ KL  A  L   M   G+ P+
Sbjct: 934  CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 993

Query: 483  QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
              TY T+I   CK     +A++L+N M      P   TYN  ID LC       A  LL 
Sbjct: 994  VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 1053

Query: 543  SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR------------- 589
                  +    V YT +I+  C + D+++A+ FFC+M + GFE  +R             
Sbjct: 1054 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 1113

Query: 590  --DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                ++  F +++S G  P +E    M+  + + GD+    +    M + G +PD F
Sbjct: 1114 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSF 1170



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 235/500 (47%), Gaps = 15/500 (3%)

Query: 6    YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
            +S  G +++AV ++  M+   L  S  T N +L     L   +   +++D++ V     +
Sbjct: 758  FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 817

Query: 63   VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
              +  +++ G  +  ++Q+A  +L     + F P   +   I++  C+ G    A   F 
Sbjct: 818  SSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR 877

Query: 123  LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
             M+  G  P+  ++  LI GLC  GS+++A E   +M R+G +P+  T++ L  G     
Sbjct: 878  KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 937

Query: 183  QISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
                A+++  KL+   +  P++ TYT +I GYC+   +     L   M  QG   NV  Y
Sbjct: 938  WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 997

Query: 242  SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            + L++  CK+G    A  L+  M   G  P++ TY+  I  LCK+ +  +A +L N+  S
Sbjct: 998  TTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFS 1057

Query: 302  KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
              +  +   +  ++   C++  I +A  +F  +  +    D+ L NI+I  + +   + E
Sbjct: 1058 CGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 1117

Query: 362  AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            + +L++ ++   + P+  T+ S+I  +CK G +  A +    +K HG  P + TY + ++
Sbjct: 1118 SERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 1177

Query: 422  AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
              C++  +     L + M  + + P  VT   +    CK+     A+ LLE +       
Sbjct: 1178 GLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL------- 1230

Query: 482  DQ----ITYNTIIRSFCKCK 497
            D+     T  T++R  C  K
Sbjct: 1231 DKKLWIRTVRTLVRKLCSEK 1250



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 212/441 (48%), Gaps = 8/441 (1%)

Query: 9    TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVYT 65
             G+V+ A++   KM +L  K ++  + SL+  L +   I   +++ +++  +    NVYT
Sbjct: 866  NGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYT 925

Query: 66   NSIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            ++ +IDGLC++   + A  LFL+      + P+V +  +++  YCK      A+ LF  M
Sbjct: 926  HTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM 985

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             + GL P+  +Y  LI+G C AGS   A E  N MG  G  P+  TY+         S+ 
Sbjct: 986  KEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRA 1045

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
              A++++ K    G + D VTYT+LI   C+  ++ + L     M   GF+ ++   ++L
Sbjct: 1046 PEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNIL 1105

Query: 245  LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
            +++ C+  ++ E+  L   + ++GL P   TY+ +I   CK+  +  A++ ++ M     
Sbjct: 1106 IAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGC 1165

Query: 305  SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             P+SF +G+++ GLC+K M+ EA   ++++I        V    +   Y K  +   A+ 
Sbjct: 1166 VPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMI 1225

Query: 365  LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
            L   L +K     I T  +L+   C   KV  A      +         VT   F  A C
Sbjct: 1226 LLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTA-C 1281

Query: 425  EEGNIQRLLALLQEMETKAIG 445
             E     L+  L E  ++ +G
Sbjct: 1282 SESGKNNLVTDLTERISRGVG 1302



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/195 (21%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
           H     +++   +  +L EAV ++ DM   G+TP  IT N ++    +   +  A  + +
Sbjct: 748 HEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFD 807

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M +  + P S++Y +++ G   +G ++ AD  L  + +          T I+ A C  G
Sbjct: 808 EMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG 867

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
            V++A+ +F +M++ GF+ ++ ++T                     ++    + G +   
Sbjct: 868 LVNRAIWYFRKMIDLGFKPNLINFTS--------------------LIDGLCKKGSIKQA 907

Query: 628 FELAAVMIKSGLLPD 642
           FE+   M+++G  P+
Sbjct: 908 FEMLEEMVRNGWKPN 922


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 157/633 (24%), Positives = 283/633 (44%), Gaps = 79/633 (12%)

Query: 22  MKELDLKVSIQTYNSLLYNL-RHTDIMW--DLYDDIKVSETPRNVYTNSIVIDGLCQQSR 78
           ++  + K  + TYN LL  L RH D+     +++ +       N +T ++++   C +  
Sbjct: 120 LQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERN 179

Query: 79  LQDAILFLQETAGKEFGPSV------------------------------VSLNAIMSRY 108
             +A+ F  E   K F PS                               V++  ++ + 
Sbjct: 180 SDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKA 239

Query: 109 CKLGF-----AEVAKGLFCLMLKYGLHPDA--FSYNILIH-------------------- 141
             + F     A  A  LF  M+K G  PDA  +SY +L H                    
Sbjct: 240 LLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVES 299

Query: 142 --------------GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
                         GLC +G +E+A E    M +  +      Y +L +      +I  A
Sbjct: 300 KAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIRLLIESGRIDKA 358

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            +   ++  +   P   T   +I   C+ G V+  L L E M+ +G+  ++  +S+L++ 
Sbjct: 359 EEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINE 418

Query: 248 MCKSGRIDEALGLLYEMEA--VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR-I 304
           +CK+ +I EA   L  M+           +Y+ L+  LCK  KVH+A  +++ M S+R  
Sbjct: 419 LCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSF 478

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+  ++  ++ G C+ + +  A   +  +I  NC+ +V  YN  ++G ++ G I +A  
Sbjct: 479 VPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQG 538

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +Y +++    SP ++T+++LI+GF    K   A  L +T+   G  P+AVTY   ++  C
Sbjct: 539 VYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLC 598

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +E        L ++M  +   P  VTYT ++ G C   K+++AV++ ++M   G  PD +
Sbjct: 599 KESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV 658

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            YN +++ F +     +A QL   M     +P + ++NI+IDGL     L +A  +   +
Sbjct: 659 AYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 718

Query: 545 -QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            Q+H  S   V Y ++I   C E  + +AM  F
Sbjct: 719 EQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVF 751



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 241/494 (48%), Gaps = 6/494 (1%)

Query: 74  CQQSRLQDAILFLQETAGKEFGP-SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           C+   L +A     E A +   P + V+  A +S  CK G  E A    C  ++  L   
Sbjct: 280 CKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEA-CRTMQESLSSS 338

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
              Y++LI  L  +G +++A E   ++    ++P + T   + +      ++  A  +++
Sbjct: 339 QPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLE 398

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ--GFKLNVIAYSVLLSSMCK 250
            ++ +G  PD+ T+++LI   C+   ++E  +  + M  +      +  +Y+ LL+S+CK
Sbjct: 399 TMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCK 458

Query: 251 SGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           + ++ +A  +   M       PD+V+YSILI G CK D++ +A +LY +M      PN  
Sbjct: 459 AKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVT 518

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            + A L GL  K  I +A+  ++ ++ + C  DV+ Y+ +I G+       +A +L+  +
Sbjct: 519 TYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETM 578

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           I +   P+ VT+N L++G CK  K  +A  L   +   G +P  VTYTT +  +C  G I
Sbjct: 579 ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKI 638

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           ++ + +  EM +K   P  V Y  ++KG  +  K  EA QL + M      PD +++N +
Sbjct: 639 EQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIM 698

Query: 490 IRSFCKCKDLRKAFQLLNQMWL-HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           I    K K L  A ++  +M   H   P   TYN LI GLC    L  A  +   +    
Sbjct: 699 IDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLK 758

Query: 549 ISLTKVAYTTIIKA 562
           +S    A+  +++A
Sbjct: 759 LSPDPHAFNVLLEA 772



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/602 (23%), Positives = 261/602 (43%), Gaps = 62/602 (10%)

Query: 81  DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILI 140
           +A+ F +    + F   V + N ++ +  +    + A  +F  M+  G+ P+ F+Y +L+
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171

Query: 141 HGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK------------------------ 176
              C   + +EA+ F  +M   G +P +  Y  + +                        
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231

Query: 177 -----------GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
                       F +  +   A K+ + ++  G  PD   Y+ ++  +C++ N++E  KL
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKL 291

Query: 226 -REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
             E+ +     LN +A++  LS +CKSG+I++A      M+   L      Y +LIR L 
Sbjct: 292 FLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLLI 350

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           +  ++ KA +   E+  + I P+S    +++  LC+   +  A    +++I      D+ 
Sbjct: 351 ESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMA 410

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT---FNSLIYGFCKNGKVADARRLL 401
            ++++I+   K   I EA Q + Q ++++IS    +   +NSL+   CK  KV  A  + 
Sbjct: 411 THSMLINELCKADKIQEA-QEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIF 469

Query: 402 DT-IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
            T +      P  V+Y+  ++ +C+   + R   L ++M      P   TY   + GL +
Sbjct: 470 STMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMR 529

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
           + ++ +A  + E+M   G +PD ITY+T+I  F   +   +A +L   M      P + T
Sbjct: 530 KGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVT 589

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           YN L+ GLC       A  L   + E      +V YTT++   C  G + +A+  F +MV
Sbjct: 590 YNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMV 649

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
            KG +                    PD      +L  F + G  G   +L  VM+     
Sbjct: 650 SKGHD--------------------PDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCK 689

Query: 641 PD 642
           PD
Sbjct: 690 PD 691



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 173/329 (52%), Gaps = 6/329 (1%)

Query: 34  YNSLLYNLRHTDIMWDLYDDIKVSETPR----NVYTNSIVIDGLCQQSRLQDAILFLQET 89
           YNSLL +L     +   +       + R    +V + SI+IDG C+   L  A    ++ 
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                 P+V + NA ++   + G    A+G++  M+  G  PD  +Y+ LIHG  +A   
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           ++A E    M   G  P+A+TY+ L  G    S+   A ++ +K++ +G DPD VTYT L
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + G+C +G +E+ +++ + M+S+G   +V+AY+ LL    ++G+  EA  L   M +   
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR-ISPNSFAHGAILLGLCEKEMITEAR 328
           KPD V+++I+I GL K  ++  A++++  M      SP+   + +++ GLC ++ ++EA 
Sbjct: 689 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 748

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
             F  +       D   +N++++  +K G
Sbjct: 749 KVFKEIDRLKLSPDPHAFNVLLEA-IKCG 776


>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
          Length = 879

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 235/497 (47%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS      ++  Y K G    A+  F  M   G+ P+AF +  L+H   +A  M  AL  
Sbjct: 240 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 299

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M   G+E   +TYSIL  GF  ++    A  + ++   K S  + + Y+ +I  +CQ
Sbjct: 300 VEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQ 359

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            GN+E   +L   M   G    +  Y  ++         ++ L +   ++  G KP +++
Sbjct: 360 SGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIIS 419

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y  L+    K  KV KA+ +  EM S  I  N+  +  ++ G         A   F+ ++
Sbjct: 420 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 479

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            S    D  +YN++I+ + K+GN+  A+ +  ++ ++R+ PS   F  +I G+   G + 
Sbjct: 480 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 539

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A   LD ++  G  P+ +TY   ++    +  +QR +++L +M    I P   TYT+++
Sbjct: 540 SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 599

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           +G      + +A +    +   G+  D   Y T++R+ CK   ++ A  +  +M    + 
Sbjct: 600 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 659

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
             +  YNILIDG    GD+  A+ L+  ++E  +      YT+ I A C  GD+ +A   
Sbjct: 660 RNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKV 719

Query: 576 FCQMVEKGFEISIRDYT 592
             +MV+ G + +++ YT
Sbjct: 720 IEEMVDVGLKPNVKTYT 736



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/555 (25%), Positives = 258/555 (46%), Gaps = 41/555 (7%)

Query: 3   AFVYSRTGMVH---------DAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDL 50
           AFV+  T +VH          A+  + +MK   L+++I TY+ L+     +  +    +L
Sbjct: 277 AFVF--TSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNL 334

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           + + K   +  N    S +I   CQ   ++ A   ++E         +   +++M  Y  
Sbjct: 335 FKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTI 394

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           +        +F  + + G  P   SY  L++     G + +AL  + +M   G++ +  T
Sbjct: 395 IQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKT 454

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           YS+L  GF  L   + A+ + +++L  G  PD   Y +LI  +C++GN++  + + E M 
Sbjct: 455 YSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQ 514

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +  + +  A+  ++     +G +  AL  L  M   G  P ++TY+ LI GL ++ KV 
Sbjct: 515 KERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQ 574

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A+ + ++M    I+PN   +  I+ G      I +A  YF  +  S    DV +Y  ++
Sbjct: 575 RAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 634

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
               K G +  A+ + R++  ++I  +   +N LI G+ + G V +A  L+  +K  G+ 
Sbjct: 635 RACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVP 694

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+  TYT+++NA C+ G++QR   +++EM    + P   TYT +IKG  +      A++ 
Sbjct: 695 PNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKC 754

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCK----------------CK---------DLRKAFQL 505
            E+M + G+ PD+ +Y+ ++ S                   C+         DLR A   
Sbjct: 755 FEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVHW 814

Query: 506 LNQMWLHNLEPTSAT 520
               WLH +E T   
Sbjct: 815 --SRWLHKIERTGGA 827



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 139/582 (23%), Positives = 259/582 (44%), Gaps = 18/582 (3%)

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           +++++      N +  + ++        ++ A+  ++E   +    ++V+ + ++S + K
Sbjct: 265 FENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAK 324

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           +  ++ A  LF          +   Y+ +IH  C +G+ME A E   +M   G++     
Sbjct: 325 INDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDV 384

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y  +  G+ ++   +    V ++L   G  P I++Y  L+  Y +IG V + L + + M 
Sbjct: 385 YHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEME 444

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           S G K N   YS+L++          A  +  EM   GL+PD   Y++LI   CK   + 
Sbjct: 445 SCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMD 504

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +AI +  +M  +R+ P++ A   I+ G      +  A    D +  S C+  V+ YN +I
Sbjct: 505 RAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALI 564

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            G V+   +  AV +  ++    I+P+  T+  ++ G+  +G +  A      IK  GL+
Sbjct: 565 HGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLK 624

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
                Y T + A C+ G +Q  LA+ +EM  + I      Y ++I G  ++  + EA  L
Sbjct: 625 LDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDL 684

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC- 529
           ++ M   GV P+  TY + I + CK  D+++A +++ +M    L+P   TY  LI G   
Sbjct: 685 MKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWAR 744

Query: 530 VNGDLKNADCL----LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC-QMVEKGF 584
           V+   +   C     L  L+    S   +  + + +A   EG  +  +   C +M E   
Sbjct: 745 VSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDL 804

Query: 585 EISIR------------DYTKSFFCMMLSNGFPPDQEICEVM 614
            + +R            + T       L   FPPD    E +
Sbjct: 805 TVDLRTAVHWSRWLHKIERTGGALTEALQRIFPPDWNSLEFL 846



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/470 (22%), Positives = 207/470 (44%), Gaps = 15/470 (3%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W+ +     +   P    + ++I  Y + G+        E M ++G + N   ++ L+ +
Sbjct: 227 WQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHA 286

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
              +  +  AL  + EM++ GL+  +VTYSILI G  K +    A  L+ E  +K  S N
Sbjct: 287 YAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLN 346

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  I+   C+   +  A      +        + +Y+ M+ GY  + N  + + ++ 
Sbjct: 347 GIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFE 406

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           +L E    PSI+++  L+  + K GKVA A  +   ++  G++ +  TY+  +N +    
Sbjct: 407 RLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLH 466

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           +     A+ +EM    + P    Y ++I+  CK   +  A+ +LE M    + P    + 
Sbjct: 467 DFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFR 526

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            II  +    D++ A   L+ M      PT  TYN LI GL     ++ A  +L  +   
Sbjct: 527 PIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIA 586

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------------KSF 595
            I+  +  YT I++ + A GD+ KA  +F ++ E G ++ +  Y             +S 
Sbjct: 587 GITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSA 646

Query: 596 FCMMLSNGF---PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             +     F   P +  I  +++  + + GD+    +L   M + G+ P+
Sbjct: 647 LAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPN 696



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 133/292 (45%), Gaps = 3/292 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVS 57
           +L   + + G +  A+ ++ KM++  ++ S + +  ++        M    D  D ++ S
Sbjct: 492 LLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRS 551

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
                V T + +I GL ++ ++Q A+  L + +     P+  +   IM  Y   G    A
Sbjct: 552 GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKA 611

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              F  + + GL  D + Y  L+   C +G M+ AL  T +M    +  +   Y+IL  G
Sbjct: 612 FEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDG 671

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +     +  A  +++++   G  P+I TYT  I   C+ G+++   K+ E M+  G K N
Sbjct: 672 WARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPN 731

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           V  Y+ L+    +    D AL    EM+  GLKPD  +Y  L+  L  +  V
Sbjct: 732 VKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATV 783



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 145/304 (47%), Gaps = 40/304 (13%)

Query: 361 EAVQLYRQLIEKRI--------------SPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           EA + +R+++E R                PS   F  +I  + K G    AR   + ++ 
Sbjct: 211 EACREFRRVVESRPDNWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRA 270

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+EP+A  +T+ ++AY    +++  L+ ++EM+++ +  T VTY+++I G  K    Q 
Sbjct: 271 RGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQS 330

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A  L ++      + + I Y+ II + C+  ++ +A +L+ +M    ++     Y+ ++ 
Sbjct: 331 ADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMH 390

Query: 527 GLCVNGDLKNAD-CLLV--SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           G  +   ++N + CL+V   L+E     + ++Y  ++  +   G V KA++   +M   G
Sbjct: 391 GYTI---IQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCG 447

Query: 584 FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
            + + + Y+      ML NGF           I  H   D  + F +   M++SGL PD+
Sbjct: 448 IKHNNKTYS------MLINGF-----------IHLH---DFANAFAIFEEMLRSGLQPDR 487

Query: 644 FLIN 647
            + N
Sbjct: 488 AIYN 491


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 234/479 (48%), Gaps = 44/479 (9%)

Query: 62  NVYTNSIVIDGL----CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           NV  NSI+ D L       SR +      + +    +  S +S   +M    K   +   
Sbjct: 148 NVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADV 207

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
           + L+  M++  + P+ F++N++I+ LC  G M +A +   DM  +G  P+ ++Y+ L  G
Sbjct: 208 EYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDG 267

Query: 178 FHLLSQISGAWK---VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
           +  L      +K   V+++++     P++ T+ +LI G+ +  N+   LK+ + ML Q  
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDV 327

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             NVI Y+ L++ +C  G+I+EA+G+  +M + G++P+L+TY  LI G CK   + +A+ 
Sbjct: 328 IPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALD 387

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           +++ +  +   P +                   RM                YN++ID Y 
Sbjct: 388 MFDSVKGQGTRPTT-------------------RM----------------YNMLIDAYC 412

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           KLG I +   L  ++  + I P + T+N LI G C+NG +  A++L D +   GL P  V
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLV 471

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           T+   M  YC  G  ++   LL+EM    + P H+TY +++KG CK+  L+ A  +   M
Sbjct: 472 TFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQM 531

Query: 475 -YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
                +  +  +YN +++ + +   L  A  LLN+M    L P   TY I+ + +   G
Sbjct: 532 EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKG 590



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 214/389 (55%), Gaps = 6/389 (1%)

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L + M+ +  + NV  ++V+++++CK+G++++A  ++ +M+  G  P++V+Y+ LI G C
Sbjct: 210 LYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYC 269

Query: 285 K---QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ 341
           K     K++KA  +  EM    +SPN      ++ G  + + +  +   F  ++  + I 
Sbjct: 270 KLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIP 329

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           +V+ YN +I+G    G I EA+ +  +++   + P+++T++SLI GFCKNG + +A  + 
Sbjct: 330 NVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMF 389

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
           D++K  G  P+   Y   ++AYC+ G I    AL +EME + I P   TY  +I GLC+ 
Sbjct: 390 DSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
             ++ A +L + +   G+ PD +T++ ++  +C   + RKA  LL +M    L+P   TY
Sbjct: 450 GNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTY 508

Query: 522 NILIDGLCVNGDLKNADCLLVSLQ-EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           NI++ G C  G+LK A  +   ++ E  + +   +Y  +++ +  +G +  A     +M+
Sbjct: 509 NIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568

Query: 581 EKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
           EKG  +  R   +     M+  GF PD E
Sbjct: 569 EKGL-VPNRITYEIVKEEMVDKGFVPDIE 596



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 223/442 (50%), Gaps = 29/442 (6%)

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +L+  Y      E G +  +     G+KL+ ++   L+ ++ K  R  +   L  EM   
Sbjct: 158 MLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRR 217

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
            ++P++ T++++I  LCK  K++KA  +  +M     SPN  ++  ++ G C  ++    
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYC--KLGGNG 275

Query: 328 RMYFDSLIMSNCIQDVV-----LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
           +MY    ++   +++ V      +NI+IDG+ K  N+  +++++++++++ + P+++T+N
Sbjct: 276 KMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYN 335

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
           SLI G C  GK+ +A  + D +   G++P+ +TY + +N +C+ G ++  L +   ++ +
Sbjct: 336 SLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQ 395

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
              PT   Y ++I   CK  K+ +   L E+M   G+ PD  TYN +I   C+  ++  A
Sbjct: 396 GTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
            +L +Q+    L P   T++IL++G C  G+ + A  LL  + +  +    + Y  ++K 
Sbjct: 456 KKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKG 514

Query: 563 HCAEGDVHKAMTFFCQM-VEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQG 621
           +C EG++  A     QM  E+   +++  Y                     V+L  + Q 
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYN--------------------VLLQGYSQK 554

Query: 622 GDLGSVFELAAVMIKSGLLPDK 643
           G L     L   M++ GL+P++
Sbjct: 555 GKLEDANMLLNEMLEKGLVPNR 576



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 216/412 (52%), Gaps = 6/412 (1%)

Query: 36  SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG 95
           +LL   R  D+ + LY ++   +   NV+T ++VI+ LC+  ++  A   +++     + 
Sbjct: 197 ALLKQNRSADVEY-LYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYS 255

Query: 96  PSVVSLNAIMSRYCKLGFAE---VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           P+VVS N ++  YCKLG       A  +   M++  + P+  ++NILI G     ++  +
Sbjct: 256 PNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGS 315

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
           L+   +M    V P+ ITY+ L  G     +I+ A  +  K++  G  P+++TY  LI G
Sbjct: 316 LKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLING 375

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           +C+ G ++E L + + +  QG +     Y++L+ + CK G+ID+   L  EME  G+ PD
Sbjct: 376 FCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           + TY+ LI GLC+   +  A +L++++ +K + P+      ++ G C +    +A M   
Sbjct: 436 VGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLK 494

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL-IEKRISPSIVTFNSLIYGFCKN 391
            +         + YNIM+ GY K GN+  A  +  Q+  E+R+  ++ ++N L+ G+ + 
Sbjct: 495 EMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQK 554

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           GK+ DA  LL+ +   GL P+ +TY        ++G +  +   L  + TK+
Sbjct: 555 GKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPDIEGHLFNVSTKS 606



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 180/357 (50%), Gaps = 8/357 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKV------SETPR 61
           +TG ++ A  V+  MK      ++ +YN+L+           +Y    V      +E   
Sbjct: 235 KTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSP 294

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+ T +I+IDG  +   L  ++   +E   ++  P+V++ N++++  C  G    A G+ 
Sbjct: 295 NLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMR 354

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+  G+ P+  +Y+ LI+G C  G M+EAL+  + +   G  P    Y++L   +  L
Sbjct: 355 DKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKL 414

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I   + + +++  +G  PD+ TY  LI G C+ GN+E   KL + + ++G   +++ +
Sbjct: 415 GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLP-DLVTF 473

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM-C 300
            +L+   C  G   +A  LL EM  +GLKP  +TY+I+++G CK+  +  A  +  +M  
Sbjct: 474 HILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEK 533

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            +R+  N  ++  +L G  +K  + +A M  + ++    + + + Y I+ +  V  G
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKG 590



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 145/312 (46%), Gaps = 19/312 (6%)

Query: 350 IDGYVKLGNIGEAVQLYRQL-IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +DG+V+ G+  +   ++  + +   +  + +  + L+  +  N +             +G
Sbjct: 124 LDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYG 183

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
            + SA++    M A  ++     +  L +EM  + I P   T+ VVI  LCK  K+ +A 
Sbjct: 184 YKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKC---KDLRKAFQLLNQMWLHNLEPTSATYNILI 525
            ++EDM V G +P+ ++YNT+I  +CK      + KA  +L +M  + + P   T+NILI
Sbjct: 244 DVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILI 303

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           DG   + +L  +  +   + + ++    + Y ++I   C  G +++A+    +MV  G +
Sbjct: 304 DGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQ 363

Query: 586 ISIRDYTK--SFFC---MM----------LSNGFPPDQEICEVMLIAFHQGGDLGSVFEL 630
            ++  Y    + FC   MM             G  P   +  +++ A+ + G +   F L
Sbjct: 364 PNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 631 AAVMIKSGLLPD 642
              M + G++PD
Sbjct: 424 KEEMEREGIVPD 435


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 161/586 (27%), Positives = 278/586 (47%), Gaps = 15/586 (2%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNV 63
           S  G +  A F + KM+E    ++  +YN L++ L   R      ++Y  + +     ++
Sbjct: 166 SVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSL 225

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T S ++ GL ++  ++  +  L+E       P+V +    +    + G    A  +   
Sbjct: 226 QTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKR 285

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM--GRHGVEPDAITYSILAKGF--- 178
           M   G  PD  +Y +LI  LC A  ++ A E    M  GRH  +PD +TY  L   F   
Sbjct: 286 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRH--KPDRVTYITLLDRFSDN 343

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             L  ++  W  ++K    G  PD+VT+T+L+   C+ GN  E     +VM  QG   N+
Sbjct: 344 RDLDSVNQFWSEMEK---DGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNL 400

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+ L+  + +  R+D+AL +   ME++G+KP   TY + I    K      A++ + +
Sbjct: 401 HTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 460

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M +K I+PN  A  A L  L +     EA+  F  L     + D V YN+M+  Y K+G 
Sbjct: 461 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 520

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I EA++L  +++E    P ++  NSLI    K  +V +A ++   +K   L+P+ VTY T
Sbjct: 521 IDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 580

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +    + G IQ  + L + M  K   P  +T+  +   LCK  ++  A+++L  M  +G
Sbjct: 581 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 640

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
             PD  TYNTII    K   +++A    +QM    + P   T   L+ G+   G +++A 
Sbjct: 641 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKAGLIEDAY 699

Query: 539 CLLVS-LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            ++ + L         + +  ++ +  AE  +  A++F  ++V  G
Sbjct: 700 KIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANG 745



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 151/603 (25%), Positives = 280/603 (46%), Gaps = 13/603 (2%)

Query: 1    MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVS 57
            M+   YS+ G + +A+ ++++M E   +  +   NSL   LY     D  W ++  +K  
Sbjct: 510  MMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 569

Query: 58   ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            +    V T + ++ GL +  ++Q+AI   +    K   P+ ++ N +    CK     +A
Sbjct: 570  KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 629

Query: 118  KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              +   M+  G  PD F+YN +I GL   G ++EA+ F + M +  V PD +T   L  G
Sbjct: 630  LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPG 688

Query: 178  FHLLSQISGAWKVIQKLLIKGSD-PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
                  I  A+K+I   L   +D P  + +  L+        ++  +   E +++ G   
Sbjct: 689  VVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICR 748

Query: 237  NVIAYSVLLSSMCKSGRIDEALG--LLYE--MEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
            +    S+L+  +  S + + A G  +L+E   + +G++P L TY++LI GL + D +  A
Sbjct: 749  D--GDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 806

Query: 293  IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
              ++ ++ +    P+   +  +L    +   I E    +  +    C  + + +NI+I G
Sbjct: 807  QDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISG 866

Query: 353  YVKLGNIGEAVQLYRQLIEKR-ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
             VK GN+ +A+ LY  L+  R  SP+  T+  LI G  K+G++ +A++L + +  +G  P
Sbjct: 867  LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRP 926

Query: 412  SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
            +   Y   +N + + G      AL + M  + + P   TY+V++  LC   ++ E +   
Sbjct: 927  NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 986

Query: 472  EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL-HNLEPTSATYNILIDGLCV 530
             ++   G+ PD + YN II    K   L +A  L N+M     + P   TYN LI  L +
Sbjct: 987  RELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGI 1046

Query: 531  NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
             G ++ A  +   +Q   +      +  +I+ +   G    A   +  MV  GF  +   
Sbjct: 1047 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1106

Query: 591  YTK 593
            Y +
Sbjct: 1107 YEQ 1109



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 244/482 (50%), Gaps = 6/482 (1%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F LM K  +  D  +Y  +   L + G + +A      M   G   +A +Y+ L    H
Sbjct: 142 VFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGL---IH 198

Query: 180 LLSQ---ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           LL +    + A +V +++++ G  P + TY+ L+ G  +  ++E  + L + M + G K 
Sbjct: 199 LLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKP 258

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NV  +++ +  + ++G+I+EA  +L  M+  G  PD+VTY++LI  LC   K+  A +++
Sbjct: 259 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 318

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M + R  P+   +  +L    +   +     ++  +     + DVV + I++D   K 
Sbjct: 319 AKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKA 378

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           GN GEA      + ++ I P++ T+N+LI G  +  ++ DA  + D ++  G++P+A TY
Sbjct: 379 GNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTY 438

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
             F++ Y + G+    L   ++M+TK I P  V     +  L K  + +EA Q+   +  
Sbjct: 439 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 498

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
           IG+ PD +TYN +++ + K  ++ +A +LL++M  +  EP     N LI+ L     +  
Sbjct: 499 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDE 558

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFF 596
           A  + + ++E  +  T V Y T++      G + +A+  F  MV+KG   +   +   F 
Sbjct: 559 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 618

Query: 597 CM 598
           C+
Sbjct: 619 CL 620



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 256/555 (46%), Gaps = 7/555 (1%)

Query: 30  SIQTYNSLLYNLR---HTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
           + +T N +L  LR     + M  ++D ++     R+  T   +   L  +  L+ A   L
Sbjct: 119 TTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFAL 178

Query: 87  QETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
           ++   +EFG   +  S N ++    K  F   A  ++  M+  G  P   +Y+ L+ GL 
Sbjct: 179 RKM--REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLG 236

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
               +E  +    +M   G++P+  T++I  +      +I+ A+++++++  +G  PD+V
Sbjct: 237 KRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVV 296

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TYTVLI   C    ++   ++   M +   K + + Y  LL     +  +D       EM
Sbjct: 297 TYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEM 356

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           E  G  PD+VT++IL+  LCK     +A    + M  + I PN   +  ++ GL     +
Sbjct: 357 EKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRL 416

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            +A   FD++           Y + ID Y K G+   A++ + ++  K I+P+IV  N+ 
Sbjct: 417 DDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 476

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           +Y   K G+  +A+++   +K  GL P +VTY   M  Y + G I   + LL EM     
Sbjct: 477 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCC 536

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  +    +I  L K  ++ EA ++   M  + + P  +TYNT++    K   +++A +
Sbjct: 537 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 596

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           L   M      P + T+N L D LC N ++  A  +L  + +         Y TII    
Sbjct: 597 LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 656

Query: 565 AEGDVHKAMTFFCQM 579
             G V +AM FF QM
Sbjct: 657 KNGQVKEAMCFFHQM 671



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 140/561 (24%), Positives = 252/561 (44%), Gaps = 46/561 (8%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
            +   V +A  +  +MKE+ LK ++ TYN+LL  L     + +   L++ +     P N  
Sbjct: 552  KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 611

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T + + D LC+   +  A+  L +       P V + N I+    K G  + A   F  M
Sbjct: 612  TFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 671

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEA-------------------------------- 152
             K  ++PD  +   L+ G+  AG +E+A                                
Sbjct: 672  KKL-VYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAG 730

Query: 153  ----LEFTNDMGRHGV--EPDAITYSILAKGFHLLSQISGAWKVIQKLLIK-GSDPDIVT 205
                + F+  +  +G+  + D+I   I+   F   +  SGA  + +K     G  P + T
Sbjct: 731  IDNAVSFSERLVANGICRDGDSILVPIIRYSFKH-NNASGARMLFEKFTKDLGVQPKLPT 789

Query: 206  YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
            Y +LI G  +   +E    +   + + G   +V  Y+ LL +  KSG+IDE   +  EM 
Sbjct: 790  YNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMS 849

Query: 266  AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR-ISPNSFAHGAILLGLCEKEMI 324
            A   +P+ +T++I+I GL K   V  A+ LY ++ S R  SP +  +G ++ GL +   +
Sbjct: 850  AHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRL 909

Query: 325  TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
             EA+  F+ +    C  +  +YNI+I+G+ K G    A  L+++++++ + P + T++ L
Sbjct: 910  YEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVL 969

Query: 385  IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME-TKA 443
            +   C  G+V +       +K  GL P  V Y   +N   +   ++  L L  EM+ ++ 
Sbjct: 970  VDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRG 1029

Query: 444  IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
            I P   TY  +I  L     ++EA ++  ++   G+ P+  T+N +IR +        A+
Sbjct: 1030 ITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAY 1089

Query: 504  QLLNQMWLHNLEPTSATYNIL 524
             +   M      P + TY  L
Sbjct: 1090 AVYQTMVTGGFSPNTGTYEQL 1110



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 175/379 (46%), Gaps = 24/379 (6%)

Query: 64   YTNSIVIDGLCQQSRLQDAIL-----------------FLQETAGKEFG--PSVVSLNAI 104
            ++  +V +G+C+     D+IL                  L E   K+ G  P + + N +
Sbjct: 737  FSERLVANGICRDG---DSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLL 793

Query: 105  MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
            +    +    E+A+ +F  +   G  PD  +YN L+     +G ++E  E   +M  H  
Sbjct: 794  IGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHEC 853

Query: 165  EPDAITYSILAKGFHLLSQISGAWKVIQKLLI-KGSDPDIVTYTVLICGYCQIGNVEEGL 223
            EP+ IT++I+  G      +  A  +   L+  +   P   TY  LI G  + G + E  
Sbjct: 854  EPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 913

Query: 224  KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
            +L E M   G + N   Y++L++   K+G  D A  L   M   G++PDL TYS+L+  L
Sbjct: 914  QLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 973

Query: 284  CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-D 342
            C   +V + +  + E+    ++P+   +  I+ GL +   + EA + F+ +  S  I  D
Sbjct: 974  CMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPD 1033

Query: 343  VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
            +  YN +I      G + EA ++Y ++    + P++ TFN+LI G+  +GK   A  +  
Sbjct: 1034 LYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1093

Query: 403  TIKLHGLEPSAVTYTTFMN 421
            T+   G  P+  TY    N
Sbjct: 1094 TMVTGGFSPNTGTYEQLPN 1112



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 4/207 (1%)

Query: 7    SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVSETPRNV 63
            S++G +++A  +   M +   + +   YN L+         D    L+  +       ++
Sbjct: 904  SKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 963

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             T S+++D LC   R+ + + + +E       P VV  N I++   K    E A  LF  
Sbjct: 964  KTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNE 1023

Query: 124  MLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M K  G+ PD ++YN LI  L IAG +EEA +  N++ R G+EP+  T++ L +G+ L  
Sbjct: 1024 MKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1083

Query: 183  QISGAWKVIQKLLIKGSDPDIVTYTVL 209
            +   A+ V Q ++  G  P+  TY  L
Sbjct: 1084 KPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 126/314 (40%), Gaps = 21/314 (6%)

Query: 330 YFDSLI-MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
           YF S+   SN +      N M++     G I E   ++  + ++ I     T+ ++    
Sbjct: 106 YFKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCL 165

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
              G +  A   L  ++  G   +A +Y   ++   +       + + + M      P+ 
Sbjct: 166 SVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSL 225

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
            TY+ ++ GL K+  ++  + LL++M  +G+ P+  T+   IR   +   + +A+++L +
Sbjct: 226 QTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKR 285

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M      P   TY +LID LC    L  A  +   ++       +V Y T++       D
Sbjct: 286 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRD 345

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
           +                    D    F+  M  +G  PD     +++ A  + G+ G  F
Sbjct: 346 L--------------------DSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 385

Query: 629 ELAAVMIKSGLLPD 642
               VM   G+LP+
Sbjct: 386 AKLDVMRDQGILPN 399


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 242/482 (50%), Gaps = 46/482 (9%)

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYS------ILAKGFHLLSQISGAWKVIQKLLIKGSD 200
             +++A+   N + R    P A  ++      + +K +H +  +S      QK+  +G  
Sbjct: 65  NDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS------QKMEFRGIK 118

Query: 201 PDIVTYTVLICGYCQIG----NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           P++    +LI  +CQ+G     + +     + +++ GF L+ ++Y  L+  +CK G    
Sbjct: 119 PNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 178

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           AL LL  ++   ++ + V Y+ +I G+CK   V+ A  LY+EM SK ISPN   + A++ 
Sbjct: 179 ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 238

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           G      + +A   F+ +I+ N   D   +NI++DG+ K   + E   ++  ++++ I P
Sbjct: 239 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 298

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
            +VT+NSL+ G+C   +V  A+ + +T+   G+ P   +Y   +N +C+   + + + L 
Sbjct: 299 DVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 358

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
            EM  K I P  VTY  +I GL K  ++  A+QL++ M+  GV P+ +TYN+II +  K 
Sbjct: 359 NEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKT 418

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
             + KA  L+ +     ++P+  TY ILIDGLC              ++ ++I++    Y
Sbjct: 419 HQVDKAIALITKFKDQGIQPSMYTYTILIDGLC-------------KVEGYDITVN--TY 463

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIR--------DYTKSFFCMMLS 601
             +I   C +G   +A++   +M +         +EI+IR        D  +  F  M++
Sbjct: 464 NVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMIT 523

Query: 602 NG 603
            G
Sbjct: 524 RG 525



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 229/472 (48%), Gaps = 20/472 (4%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           ++ + TP     N I +  L +       +   Q+   +   P++ + N ++  +C+LG 
Sbjct: 78  LRQNPTPPAFEFNKI-LGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGL 136

Query: 114 --AEVAKGLFC--LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
              ++ +       ++  G H D  SY  LIHGLC  G    AL+    +    V+ +A+
Sbjct: 137 IPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAV 196

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
            Y+ +  G      ++ A+ +  +++ KG  P++VTY+ LI G+  +G +++ + L   +
Sbjct: 197 MYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKI 256

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           + +  K +   +++L+   CK  ++ E   +   M   G+ PD+VTY+ L+ G C   +V
Sbjct: 257 ILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEV 316

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
           + A  ++N M    ++P+  ++  ++ G C+ + + +A   F+ +   N I +VV YN +
Sbjct: 317 NTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSL 376

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           IDG  K G I  A+QL  Q+ ++ + P+I+T+NS+I    K  +V  A  L+   K  G+
Sbjct: 377 IDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGI 436

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
           +PS  TYT  ++  C               + +    T  TY V+I G CK+    EA+ 
Sbjct: 437 QPSMYTYTILIDGLC---------------KVEGYDITVNTYNVMIHGFCKKGLFDEALS 481

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
           LL  M      P+ +TY   IRS     +  KA +L  +M    L   SA+Y
Sbjct: 482 LLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASY 533



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 231/491 (47%), Gaps = 14/491 (2%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           + R+ V PD+     + K F     +     +I   LI  +  + ++Y+     +    +
Sbjct: 11  LPRYYVVPDS---HFVPKKFQSFQFLKNTHFLIS-FLILLTKINFISYSSTSTTFHSNND 66

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           V++ + L   +L Q        ++ +L S+ KS      L L  +ME  G+KP+L   +I
Sbjct: 67  VDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNI 126

Query: 279 LIRGLCKQD----KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           LI   C+      ++H+A   ++++ +     +  ++G ++ GLC+   + E R   D L
Sbjct: 127 LIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCK---VGETRAALDLL 183

Query: 335 --IMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             +    +Q + V+YN +I G  K  ++ +A  LY +++ K ISP++VT+++LI GF   
Sbjct: 184 QRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVV 243

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           GK+ DA  L + I L  ++P   T+   ++ +C++  ++    +   M  + I P  VTY
Sbjct: 244 GKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTY 303

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             ++ G C   ++  A  +   M   GV PD  +YN +I  FCK K + KA  L N+M  
Sbjct: 304 NSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHC 363

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
            N+ P   TYN LIDGL  +G +  A  L+  + +  +    + Y +II A      V K
Sbjct: 364 KNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDK 423

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           A+    +  ++G + S+  YT     +    G+        VM+  F + G       L 
Sbjct: 424 AIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLL 483

Query: 632 AVMIKSGLLPD 642
           + M  S  +P+
Sbjct: 484 SKMKDSSCIPN 494



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 204/430 (47%), Gaps = 24/430 (5%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSI 68
           +H A     K+  L   +   +Y +L++ L     T    DL   +       N    + 
Sbjct: 141 IHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNT 200

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           VI G+C+   + DA     E   K   P+VV+ +A++S +  +G  + A  LF  ++   
Sbjct: 201 VIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILEN 260

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + PD +++NIL+ G C    M+E       M + G+ PD +TY+ L  G+ L+ +++ A 
Sbjct: 261 IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAK 320

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            +   +   G +PDI +Y +LI G+C+I  V++ + L   M  +    NV+ Y+ L+  +
Sbjct: 321 SIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGL 380

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
            KSGRI  AL L+ +M   G+ P+++TY+ +I  L K  +V KAI L  +   + I P+ 
Sbjct: 381 SKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSM 440

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
           + +  ++ GLC+ E        +D  + +        YN+MI G+ K G   EA+ L  +
Sbjct: 441 YTYTILIDGLCKVEG-------YDITVNT--------YNVMIHGFCKKGLFDEALSLLSK 485

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + +    P+ VT+   I     N +   A +L   +   GL   + +Y       C    
Sbjct: 486 MKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASYP------CSSMK 539

Query: 429 IQRLLALLQE 438
           I + L ++Q 
Sbjct: 540 IHQSLTMVQH 549


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 144/513 (28%), Positives = 242/513 (47%), Gaps = 26/513 (5%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           +++LI      G  EEAL  + +M      PD+     +  G     +    W   Q ++
Sbjct: 135 FSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLMI 191

Query: 196 IKGSDPDIVTYTVLI-CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
            +G  PD+  Y VL  C + Q G   +  KL + M S G K NV  Y++ +  +C+  ++
Sbjct: 192 SRGLVPDVHIYFVLFQCCFKQ-GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           +EA  +   M+  G+ P+L TYS +I G CK   V +A  LY E+    + PN    G +
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G C+   +  AR  F  ++      ++ +YN +I G+ K GN+ EAV L  ++    +
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
           SP + T+  LI G C   +VA+A RL   +K   + PS+ TY + ++ YC+E N+++ L 
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L  EM    + P  +T++ +I G C    ++ A+ L  +M + G+ PD +TY  +I +  
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K  ++++A +L + M    + P   T+  L+DG    G L  A        +       V
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHV 550

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
            +T +I+  C  G + +A  FF  M   G    I  Y        +  G   ++ I + M
Sbjct: 551 GFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVS------MLKGHLQEKRITDTM 604

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +              L   MIK+G+LP+  L+N
Sbjct: 605 M--------------LQCDMIKTGILPN-LLVN 622



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 236/475 (49%), Gaps = 1/475 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +++GL ++ R     +  Q    +   P V     +     K G     + L   M   G
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + P+ + Y I I  LC    MEEA +    M +HGV P+  TYS +  G+     +  A+
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            + +++L+    P++V +  L+ G+C+   +     L   M+  G   N+  Y+ L+   
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           CKSG + EA+GLL EME++ L PD+ TY+ILI GLC +D+V +A +L+ +M ++RI P+S
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSS 409

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             + +++ G C++  + +A      +  S    +++ ++ +IDGY  + +I  A+ LY +
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           +  K I P +VT+ +LI    K   + +A RL   +   G+ P+  T+   ++ + +EG 
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           +   +   QE   +     HV +T +I+GLC+   +  A +   DM   G+TPD  +Y +
Sbjct: 530 LSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVS 589

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +++   + K +     L   M    + P      +L      NG +K+A C L +
Sbjct: 590 MLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA-CFLTN 643



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 210/443 (47%), Gaps = 38/443 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           + G+      ++ +M  L +K ++  Y   + +L   + M +   +++ +K      N+Y
Sbjct: 211 KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLY 270

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S +IDG C+   ++ A    +E    E  P+VV    ++  +CK      A+ LF  M
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHM 330

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +K+G+ P+ + YN LIHG C +G+M EA+   ++M    + PD  TY+IL  G  +  Q+
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A ++ QK+  +   P   TY  LI GYC+  N+E+ L L   M + G + N+I +S L
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   C    I  A+GL +EM   G+ PD+VTY+ LI    K+  + +A++LY++M    I
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            PN                                      +  ++DG+ K G +  A+ 
Sbjct: 511 HPNDHT-----------------------------------FACLVDGFWKEGRLSVAID 535

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
            Y++  ++R   + V F  LI G C+NG +  A R    ++  G+ P   +Y + +  + 
Sbjct: 536 FYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHL 595

Query: 425 EEGNIQRLLALLQEMETKAIGPT 447
           +E  I   + L  +M    I P 
Sbjct: 596 QEKRITDTMMLQCDMIKTGILPN 618



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 201/405 (49%), Gaps = 38/405 (9%)

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME-------------------------- 265
           Q  K ++  +S+L+    + G  +EAL +  EM+                          
Sbjct: 126 QSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWV 185

Query: 266 ------AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
                 + GL PD+  Y +L +   KQ    K  +L +EM S  I PN + +   +L LC
Sbjct: 186 DYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLC 245

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
               + EA   F+ +     + ++  Y+ MIDGY K GN+ +A  LY++++   + P++V
Sbjct: 246 RDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVV 305

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
            F +L+ GFCK  ++  AR L   +   G++P+   Y   ++ +C+ GN+   + LL EM
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
           E+  + P   TYT++I GLC + ++ EA +L + M    + P   TYN++I  +CK  ++
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
            +A  L ++M    +EP   T++ LIDG C   D+K A  L   +    I    V YT +
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
           I AH  E ++ +A+  +  M+E G  I   D+T  F C++  +GF
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAG--IHPNDHT--FACLV--DGF 524



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 152/299 (50%), Gaps = 5/299 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N+Y  + +I G C+   + +A+  L E       P V +   +++  C       A  LF
Sbjct: 338 NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLF 397

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M    + P + +YN LIHG C   +ME+AL+  ++M   GVEP+ IT+S L  G+  +
Sbjct: 398 QKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNV 457

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
             I  A  +  ++ IKG  PD+VTYT LI  + +  N++E L+L   ML  G   N   +
Sbjct: 458 RDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTF 517

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+    K GR+  A+    E        + V ++ LI GLC+   + +A + +++M S
Sbjct: 518 ACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRS 577

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM-----IDGYVK 355
             I+P+  ++ ++L G  +++ IT+  M    +I +  + ++++  ++      +GYVK
Sbjct: 578 CGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVK 636


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 155/590 (26%), Positives = 265/590 (44%), Gaps = 81/590 (13%)

Query: 72  GLCQQSRLQDAILFLQETAGK-------------EFG--PSVVSLNAIMSRYCKLGFA-E 115
           GL   +   +A++F   +AG+             EFG  P+    NA++      G A  
Sbjct: 134 GLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVP 193

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
           +A  L+  M+  G  P+  +YN+LIHGLC  G+  +AL+  ++M   G+ P+  T++IL 
Sbjct: 194 LALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILL 253

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG-F 234
                  Q+  A  ++  +  KG  PD VTY   + G C+ G V+E ++  E +   G F
Sbjct: 254 SSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTF 313

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYE-MEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            L +  YS L+  +  +GR +E      E +E   + PD+V Y+I+IRG  +  + + A 
Sbjct: 314 VLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAF 373

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
             ++EM  K  +P++F +  +L  LC+   +  AR     ++ +N + D+  Y  MI G 
Sbjct: 374 AFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGL 433

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF------------------------- 388
            K   + EA+Q++  ++E    PS++T+N LI G                          
Sbjct: 434 CKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLF 493

Query: 389 -----------------------CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
                                  C++G+V  A +LL  I   G+ P  VTY T +N  C+
Sbjct: 494 LRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCK 553

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
             N+   L L +E++ K      +TY  +I  L +  +  +A+ L +D+   G TP    
Sbjct: 554 VRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPI 613

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD--CL--- 540
           YN+++RS C+ + L +A  L    W  +L      YN+L     ++   K  +  CL   
Sbjct: 614 YNSMMRSLCRMQKLSQAINL----WFDHL---PRKYNLLAQDEVISSARKKFEEGCLHEA 666

Query: 541 ---LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
              L+ + +   S+    YT  +      G +  A+  F  + E G +I+
Sbjct: 667 VRELIKIDQEYGSVNSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDIT 716



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 156/613 (25%), Positives = 285/613 (46%), Gaps = 27/613 (4%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMK-ELDLKVSIQTYNSLLYNLRHT----DIMWDLYDDIKV 56
           L F ++  G  H+AV   ++M+ E   + +   YN++L  L  +     +   LY+ +  
Sbjct: 145 LIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVA 204

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           +    N  T +++I GLC++    DA+    E   +   P+V +   ++S  C  G  + 
Sbjct: 205 AGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKE 264

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT-YSILA 175
           A+ L   M   G  PD  +YN  + GLC AG ++EA+E    +   G     +  YS L 
Sbjct: 265 AENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLI 324

Query: 176 KGFHLLSQISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
            G  L  +    ++   ++L +    PDIV YT++I G  + G   +     + M  +GF
Sbjct: 325 DGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGF 384

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             +   Y+ LL ++C +G +D A  L+ EM    +  D+ TY+ +I GLCK+  V +A+Q
Sbjct: 385 TPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQ 444

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF--------DSLIM-----SNCIQ 341
           +++ M      P+   +  ++ GL     + EARM F         SL +     +N ++
Sbjct: 445 VFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVR 504

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D      +++   + G + +A +L R +I+  + P +VT+N+L+ G CK   +  A RL 
Sbjct: 505 DSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLF 564

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +++ G     +TY T +++          L L Q++      P+   Y  +++ LC+ 
Sbjct: 565 RELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRM 624

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD---LRKAFQLLNQMWLHNLEPTS 518
            KL +A+ L  D   +    + +  + +I S  K  +   L +A + L ++        S
Sbjct: 625 QKLSQAINLWFDH--LPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNS 682

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
             Y I + GL   G +++A  +   L+E  I +T      + K  C EG++  A+     
Sbjct: 683 CPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNLGAAVDVMLY 742

Query: 579 MVEKGFEISIRDY 591
            ++KGF  ++R Y
Sbjct: 743 TLKKGF--TMRRY 753



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 176/451 (39%), Gaps = 100/451 (22%)

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK-RISPNSFAHGAILLGLCEK 321
           + +A GL+P    +  LI       + H+A++ ++ M  +    P +F + A+L      
Sbjct: 129 DAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVL------ 182

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
                       L+ S                   G +  A+ LY +++     P+  T+
Sbjct: 183 ----------RVLVASG------------------GAVPLALALYNRMVAAGCLPNRATY 214

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N LI+G CK G   DA +L D +   G+ P+  T+T  +++ C  G ++    LL  ME 
Sbjct: 215 NVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMED 274

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM-----YVIG------------------ 478
           K   P  VTY   + GLCK  ++ EA++ LE +     +V+G                  
Sbjct: 275 KGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYE 334

Query: 479 --------------VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
                         V+PD + Y  +IR   +      AF   ++M      P +  YN L
Sbjct: 335 EGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTL 394

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +  LC  GDL  A  L+  +  +N+ L    YTT+I   C E  V +AM  F  MVE G 
Sbjct: 395 LKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGC 454

Query: 585 EISIRDY---------------TKSFFCMMLSNGFPP-------------DQEICEVMLI 616
             S+  Y                +  F  M     P              D E  + ++ 
Sbjct: 455 HPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVE 514

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           +  Q G +   ++L   +I SG++PD    N
Sbjct: 515 SMCQSGQVLKAYKLLRGIIDSGVVPDVVTYN 545



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/444 (23%), Positives = 196/444 (44%), Gaps = 30/444 (6%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+I G  +  R  DA  F  E   K F P     N ++   C  G  + A+ L   M++
Sbjct: 357 TIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVR 416

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             +  D  +Y  +I GLC    ++EA++  + M   G  P  +TY++L  G +   ++  
Sbjct: 417 NNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEE 476

Query: 187 AWKVIQKLLIKGSDP--------------DIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
           A  +  K+ + G++P              D  T   L+   CQ G V +  KL   ++  
Sbjct: 477 ARMLFYKMEV-GNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDS 535

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   +V+ Y+ LL+ +CK   +D AL L  E++  G   D +TY  LI  L +  + + A
Sbjct: 536 GVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDA 595

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA-RMYFDSLIMSNCI--QDVVLYNIM 349
           + L+ ++     +P+   + +++  LC  + +++A  ++FD L     +  QD V+ +  
Sbjct: 596 LTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISSAR 655

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY-----GFCKNGKVADARRLLDTI 404
                + G + EAV   R+LI  +I     + NS  Y     G  + G++ DA ++   +
Sbjct: 656 KK--FEEGCLHEAV---RELI--KIDQEYGSVNSCPYTIWLIGLIQAGRIEDALKIFHIL 708

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           +  G++ +           C EGN+   + ++     K           ++  LC   + 
Sbjct: 709 EESGIDITPACCVHLSKYLCLEGNLGAAVDVMLYTLKKGFTMRRYVGNRLLCSLCIHHRR 768

Query: 465 QEAVQLLEDMYVIGVTPDQITYNT 488
           ++A  L   M+++G   D   + +
Sbjct: 769 KDAQALAWRMHLVGYDMDAYLHES 792


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 152/578 (26%), Positives = 271/578 (46%), Gaps = 23/578 (3%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEF-GPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           S+ +   C+   L  A   L+E   K+   PS  +  +++    K G  + A  L   ML
Sbjct: 272 SLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEML 331

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             G+  +  +   LI G C    +  AL   + M + G  P+++T+S+L + F    ++ 
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A +  +K+ + G  P +     +I G+ +    EE LKL +     G   NV   + +L
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTIL 450

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           S +CK G+ DEA  LL +ME+ G+ P++V+Y+ ++ G C+Q  +  A  +++ +  K + 
Sbjct: 451 SWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLK 510

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           PN++ +  ++ G         A    + +  SN   + V+Y  +I+G  K+G   +A +L
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570

Query: 366 YRQLIE-KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
              +IE KR+  S +++NS+I GF K G++  A    + +  +G+ P+ +TYT+ MN  C
Sbjct: 571 LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLC 630

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +   + + L +  EM+ K +      Y  +I G CK+  ++ A  L  ++   G+ P Q 
Sbjct: 631 KNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP 690

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            YN++I  F    ++  A  L  +M    L     TY  LIDGL  +G+L  A  L   +
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM 750

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
           Q   +   ++ YT I+     +G   K +  F +M +                    N  
Sbjct: 751 QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKK--------------------NNV 790

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            P+  I   ++   ++ G+L   F L   M+  G+LPD
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPD 828



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 241/483 (49%), Gaps = 2/483 (0%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L+D ++      N  T S++I+   +   ++ A+ F ++       PSV  ++ I+  + 
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           K    E A  LF    + GL  + F  N ++  LC  G  +EA E  + M   G+ P+ +
Sbjct: 421 KGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           +Y+ +  G      +  A  V   +L KG  P+  TY++LI G  +  + +  L++   M
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDK 288
            S   ++N + Y  +++ +CK G+  +A  LL  M E   L    ++Y+ +I G  K+ +
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGE 599

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           +  A+  Y EMC   ISPN   + +++ GLC+   + +A    D +       D+  Y  
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 659

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDG+ K  N+  A  L+ +L+E+ ++PS   +NSLI GF   G +  A  L   +   G
Sbjct: 660 LIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG 719

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           L     TYTT ++   ++GN+     L  EM+   + P  + YTV++ GL K+ +  + V
Sbjct: 720 LRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVV 779

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           ++ E+M    VTP+ + YN +I    +  +L +AF+L ++M    + P  AT++IL+ G 
Sbjct: 780 KMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQ 839

Query: 529 CVN 531
             N
Sbjct: 840 VGN 842



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 246/521 (47%), Gaps = 4/521 (0%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + VI    +Q  + DAI    E        +VV+  ++++ +CK      A  LF  M
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K G  P++ ++++LI      G ME+ALEF   M   G+ P       + +G+    + 
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKH 425

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A K+  +    G     V  T+L    C+ G  +E  +L   M S+G   NV++Y+ +
Sbjct: 426 EEALKLFDESFETGLANVFVCNTIL-SWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   C+   +D A  +   +   GLKP+  TYSILI G  +      A+++ N M S  I
Sbjct: 485 MLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNI 544

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN--CIQDVVLYNIMIDGYVKLGNIGEA 362
             N   +  I+ GLC+    ++AR    ++I     C+   + YN +IDG+ K G +  A
Sbjct: 545 EVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS-CMSYNSIIDGFFKEGEMDSA 603

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           V  Y ++    ISP+++T+ SL+ G CKN ++  A  + D +K  G++     Y   ++ 
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDG 663

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +C+  N++   AL  E+  + + P+   Y  +I G      +  A+ L + M   G+  D
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD 723

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             TY T+I    K  +L  A +L  +M    L P    Y ++++GL   G       +  
Sbjct: 724 LGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFE 783

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            ++++N++   + Y  +I  H  EG++ +A     +M++KG
Sbjct: 784 EMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/583 (23%), Positives = 267/583 (45%), Gaps = 53/583 (9%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           AK L+  M+  G+  D  +  +L+          EALE  +     G EPD++ YS+  +
Sbjct: 217 AKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQ 276

Query: 177 GFHLLSQISGAWKVIQKLLIKG-SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                  ++ A  +++++  K    P   TYT +I    + GN+++ ++L++ MLS G  
Sbjct: 277 ACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGIS 336

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           +NV+A + L++  CK+  +  AL L  +ME  G  P+ VT+S+LI    K  ++ KA++ 
Sbjct: 337 MNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEF 396

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           Y +M    ++P+ F    I+ G  + +   EA   FD    +  + +V + N ++    K
Sbjct: 397 YKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTILSWLCK 455

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
            G   EA +L  ++  + I P++V++N+++ G C+   +  AR +   I   GL+P+  T
Sbjct: 456 QGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYT 515

Query: 416 YT-----------------------------------TFMNAYCEEGNIQRLLALLQEM- 439
           Y+                                   T +N  C+ G   +   LL  M 
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
           E K +  + ++Y  +I G  K+ ++  AV   E+M   G++P+ ITY +++   CK   +
Sbjct: 576 EEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRM 635

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
            +A ++ ++M    ++     Y  LIDG C   ++++A  L   L E  ++ ++  Y ++
Sbjct: 636 DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSL 695

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------------KSFFCMMLSNGF 604
           I      G++  A+  + +M++ G    +  YT                  +  M + G 
Sbjct: 696 ISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL 755

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
            PD+ I  V++    + G    V ++   M K+ + P+  + N
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN 798



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 184/429 (42%), Gaps = 70/429 (16%)

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRID---------------------------- 255
           KL +   S GF++N  A++ LL++  K  + D                            
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208

Query: 256 -------EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
                  EA  L   M A+G+  D VT  +L+R   +++K  +A+++ +    +   P+S
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSN-CIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
             +   +   C+   +  A      +     C+     Y  +I   VK GN+ +A++L  
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           +++   IS ++V   SLI G CKN  +  A  L D ++  G  P++VT++  +  + + G
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG 388

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKG------------------------------ 457
            +++ L   ++ME   + P+      +I+G                              
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNT 448

Query: 458 ----LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
               LCKQ K  EA +LL  M   G+ P+ ++YN ++   C+ K++  A  + + +    
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           L+P + TY+ILIDG   N D +NA  ++  +   NI +  V Y TII   C  G   KA 
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568

Query: 574 TFFCQMVEK 582
                M+E+
Sbjct: 569 ELLANMIEE 577



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 113/262 (43%), Gaps = 16/262 (6%)

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           +L+D+ K  G E ++  +   +NAY ++      + ++ +M    + P        +  L
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
            ++  L EA +L   M  IGV  D +T   ++R+  + +   +A ++L++      EP S
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISL-TKVAYTTIIKAHCAEGDVHKAMTFFC 577
             Y++ +   C   DL  A+ LL  ++E  + + ++  YT++I A   +G++  A+    
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328

Query: 578 QMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           +M+  G  +++   T                  F  M   G  P+     V++  F + G
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG 388

Query: 623 DLGSVFELAAVMIKSGLLPDKF 644
           ++    E    M   GL P  F
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVF 410


>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
          Length = 905

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 147/533 (27%), Positives = 252/533 (47%), Gaps = 55/533 (10%)

Query: 73  LCQQS----RLQDAILF---LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           LC+QS     L    LF   L E + +EFG  +V        Y K G    A+  F  M 
Sbjct: 272 LCKQSLDVLDLTYPFLFKKLLHEPSRREFGLMIVY-------YAKRGDKHHARATFENMR 324

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF------H 179
             G+ P+AF +  L+H   +A  M  AL    +M   G+E   +TYSIL  GF      H
Sbjct: 325 ARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSH 384

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               +  A ++++++   G D  I  Y  ++ GY  I N  + L + E +   GFK ++I
Sbjct: 385 QSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSII 444

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           +Y  LL+   K G++ +AL +  EME+ G+K +  TYS+LI G          I L++  
Sbjct: 445 SYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGF---------IHLHD-- 493

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
                  N+FA                    F+ ++ S    D  +YN++I+ + K+GN+
Sbjct: 494 -----FANAFA-------------------IFEEMLRSGLQPDRAIYNLLIEAFCKMGNM 529

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A+ +  ++ ++R+ PS   F  +I G+   G +  A   LD ++  G  P+ +TY   
Sbjct: 530 DRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNAL 589

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++    +  +QR +++L +M    I P   TYT++++G      + +A +    +   G+
Sbjct: 590 IHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGL 649

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
             D   Y T++R+ CK   ++ A  +  +M    +   +  YNILIDG    GD+  A+ 
Sbjct: 650 KLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAED 709

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           L+  ++E  +      YT+ I A C  GD+ +A     +MV+ G + +++ YT
Sbjct: 710 LMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYT 762



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/549 (24%), Positives = 249/549 (45%), Gaps = 36/549 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRN 62
           Y++ G  H A      M+   ++ +   + SL++     R         +++K       
Sbjct: 307 YAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELT 366

Query: 63  VYTNSIVIDGLC------QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           + T SI+I G        Q   ++ A   ++E         +   +++M  Y  +     
Sbjct: 367 IVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENK 426

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
              +F  + + G  P   SY  L++     G + +AL  + +M   G++ +  TYS+L  
Sbjct: 427 CLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLIN 486

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           GF  L   + A+ + +++L  G  PD   Y +LI  +C++GN++  + + E M  +  + 
Sbjct: 487 GFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQP 546

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +  A+  ++     +G +  AL  L  M   G  P ++TY+ LI GL ++ KV +A+ + 
Sbjct: 547 SNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVL 606

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           ++M    I+PN   +  I+ G      I +A  YF  +  S    DV +Y  ++    K 
Sbjct: 607 DKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKS 666

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G +  A+ + R++  ++I  +   +N LI G+ + G V +A  L+  +K  G+ P+  TY
Sbjct: 667 GRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTY 726

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           T+++NA C+ G++QR   +++EM    + P   TYT +IKG  +      A++  E+M +
Sbjct: 727 TSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKL 786

Query: 477 IGVTPDQITYNTIIRSFCK----------------CK---------DLRKAFQLLNQMWL 511
            G+ PD+ +Y+ ++ S                   C+         DLR A       WL
Sbjct: 787 AGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVHW--SRWL 844

Query: 512 HNLEPTSAT 520
           H +E T   
Sbjct: 845 HKIERTGGA 853



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/555 (22%), Positives = 232/555 (41%), Gaps = 66/555 (11%)

Query: 98  VVSLNAIMSRY---CKLGFAEVAKGLFCLMLKYGLH-PDAFSYNILIHGLCIAGSMEEAL 153
           +  L+ ++S Y   CK    +V    +  + K  LH P    + ++I      G    A 
Sbjct: 259 IPKLSGVVSAYFPLCKQSL-DVLDLTYPFLFKKLLHEPSRREFGLMIVYYAKRGDKHHAR 317

Query: 154 EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
               +M   G+EP+A  ++ L   + +   + GA   ++++  +G +  IVTY++LI G+
Sbjct: 318 ATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGF 377

Query: 214 CQI------GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            +I      GN+E   +L   M   G    +  Y  ++         ++ L +   ++  
Sbjct: 378 AKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKEC 437

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G KP +++Y  L+    K  KV KA+ +  EM S  I  N+                   
Sbjct: 438 GFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNN------------------- 478

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                             Y+++I+G++ L +   A  ++ +++   + P    +N LI  
Sbjct: 479 ----------------KTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEA 522

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           FCK G +  A  +L+ ++   ++PS   +   +  Y   G+++  L  L  M      PT
Sbjct: 523 FCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPT 582

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            +TY  +I GL ++ K+Q AV +L+ M + G+TP++ TY  I+R +    D+ KAF+   
Sbjct: 583 VMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFT 642

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           ++    L+     Y  L+   C +G +++A  +   +    I      Y  +I      G
Sbjct: 643 KIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRG 702

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           DV +A     QM E                    +G PP+       + A  + GD+   
Sbjct: 703 DVWEAEDLMKQMKE--------------------DGVPPNIHTYTSYINACCKAGDMQRA 742

Query: 628 FELAAVMIKSGLLPD 642
            ++   M+  GL P+
Sbjct: 743 EKVIEEMVDVGLKPN 757



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 175/382 (45%), Gaps = 26/382 (6%)

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           +P    + ++I    K+   H A   +  M ++ I PN+F   +++        +  A  
Sbjct: 294 EPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 353

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKL------GNIGEAVQLYRQLIEKRISPSIVTFNS 383
             + +        +V Y+I+I G+ K+      GN+  A +L R++ E  I   I  ++S
Sbjct: 354 CVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHS 413

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           +++G+           + + +K  G +PS ++Y   +N Y + G + + L++ +EME+  
Sbjct: 414 MMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCG 473

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           I   + TY+++I G         A  + E+M   G+ PD+  YN +I +FCK  ++ +A 
Sbjct: 474 IKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAI 533

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
            +L +M    ++P++  +  +I+G  V GD+K+A   L  ++      T + Y  +I   
Sbjct: 534 CILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL 593

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
             +  V +A++   +M       SI              G  P++    +++  +   GD
Sbjct: 594 VRKHKVQRAVSVLDKM-------SI-------------AGITPNEHTYTIIMRGYAASGD 633

Query: 624 LGSVFELAAVMIKSGLLPDKFL 645
           +G  FE    + +SGL  D ++
Sbjct: 634 IGKAFEYFTKIKESGLKLDVYI 655


>gi|26449752|dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]
          Length = 593

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 240/450 (53%), Gaps = 5/450 (1%)

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           +S ++  LC Q +L  A+   ++       P +++ N +++  CK G+ E A GL   M 
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G  P+  SYN LI GLC   ++++AL   N M ++G+ P+ +T +I+         I 
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243

Query: 186 GAWKVIQKLLIKGSDP----DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
              K + + ++  S      DIV  T+L+    + GNV + L++ + M  +    + + Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +V++  +C SG +  A G + +M   G+ PD+ TY+ LI  LCK+ K  +A  L+  M +
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             ++P+  ++  I+ GLC    +  A  +  S++ S+ + +V+L+N++IDGY + G+   
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ +   ++   + P++ T N+LI+G+ K G++ DA  + + ++   + P   TY   + 
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLG 483

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           A C  G+++    L  EM  +   P  +TYT +++GLC + +L++A  LL  +   G+T 
Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITI 543

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           D + +  + + + + +   +A+ L+ + WL
Sbjct: 544 DHVPFLILAKKYTRLQRPGEAY-LVYKKWL 572



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 192/384 (50%), Gaps = 4/384 (1%)

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C  G ++  L LR+ M+  G    +I ++ LL+ +CK+G I++A GL+ EM  +G  P+ 
Sbjct: 132 CLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNC 191

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           V+Y+ LI+GLC  + V KA+ L+N M    I PN      I+  LC+K +I         
Sbjct: 192 VSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLE 251

Query: 334 LIM----SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
            I+    +N   D+V+  I++D   K GN+ +A+++++++ +K +    V +N +I G C
Sbjct: 252 EILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLC 311

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
            +G +  A   +  +   G+ P   TY T ++A C+EG       L   M+   + P  +
Sbjct: 312 SSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQI 371

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           +Y V+I+GLC    +  A + L  M    + P+ + +N +I  + +  D   A  +LN M
Sbjct: 372 SYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLM 431

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
             + ++P   T N LI G    G L +A  +   ++   I      Y  ++ A C  G +
Sbjct: 432 LSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHL 491

Query: 570 HKAMTFFCQMVEKGFEISIRDYTK 593
             A   + +M+ +G +  I  YT+
Sbjct: 492 RLAFQLYDEMLRRGCQPDIITYTE 515



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 154/321 (47%)

Query: 53  DIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
           D   +  P ++   +I++D   +   +  A+   +E + K      V  N I+   C  G
Sbjct: 255 DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSG 314

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
               A G  C M+K G++PD F+YN LI  LC  G  +EA +    M   GV PD I+Y 
Sbjct: 315 NMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYK 374

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
           ++ +G  +   ++ A + +  +L     P+++ + V+I GY + G+    L +  +MLS 
Sbjct: 375 VIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSY 434

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G K NV   + L+    K GR+ +A  +  EM +  + PD  TY++L+   C    +  A
Sbjct: 435 GVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLA 494

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            QLY+EM  +   P+   +  ++ GLC K  + +A      +  +    D V + I+   
Sbjct: 495 FQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKK 554

Query: 353 YVKLGNIGEAVQLYRQLIEKR 373
           Y +L   GEA  +Y++ +  R
Sbjct: 555 YTRLQRPGEAYLVYKKWLATR 575



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 180/390 (46%), Gaps = 21/390 (5%)

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           L  +S ++R LC Q K+  A+ L  +M    + P    H  +L GLC+   I +A     
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVR 180

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +       + V YN +I G   + N+ +A+ L+  + +  I P+ VT N +++  C+ G
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240

Query: 393 KVA-DARRLLDTIKLHGLEPSA----VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            +  + ++LL+ I L   + +A    V  T  M++  + GN+ + L + +EM  K +   
Sbjct: 241 VIGNNNKKLLEEI-LDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPAD 299

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            V Y V+I+GLC    +  A   + DM   GV PD  TYNT+I + CK     +A  L  
Sbjct: 300 SVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHG 359

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M    + P   +Y ++I GLC++GD+  A+  L+S+ + ++    + +  +I  +   G
Sbjct: 360 TMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYG 419

Query: 568 DVHKAMTFFCQMVEKGFEIS-------IRDYTKSFFCM--------MLSNGFPPDQEICE 612
           D   A++    M+  G + +       I  Y K    +        M S    PD     
Sbjct: 420 DTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYN 479

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           ++L A    G L   F+L   M++ G  PD
Sbjct: 480 LLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 127/257 (49%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +++ ++     P +    +++I GLC    +  A  F+ +   +   P V + N ++S  
Sbjct: 286 EVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISAL 345

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK G  + A  L   M   G+ PD  SY ++I GLCI G +  A EF   M +  + P+ 
Sbjct: 346 CKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEV 405

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           + ++++  G+      S A  V+  +L  G  P++ T   LI GY + G + +   ++  
Sbjct: 406 LLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNE 465

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M S     +   Y++LL + C  G +  A  L  EM   G +PD++TY+ L+RGLC + +
Sbjct: 466 MRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGR 525

Query: 289 VHKAIQLYNEMCSKRIS 305
           + KA  L + + +  I+
Sbjct: 526 LKKAESLLSRIQATGIT 542



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 125/285 (43%), Gaps = 19/285 (6%)

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           +S++   C  GK+  A  L   +   G+ P  +T+   +N  C+ G I++   L++EM  
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK----CK 497
               P  V+Y  +IKGLC    + +A+ L   M   G+ P+++T N I+ + C+      
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
           + +K  + +      N         IL+D    NG++  A  +   + + N+    V Y 
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYN 304

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MMLSN 602
            II+  C+ G++  A  F C MV++G    +  Y    S  C              M + 
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           G  PDQ   +V++      GD+    E    M+KS LLP+  L N
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWN 409



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 3/228 (1%)

Query: 33  TYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN+L+  L      D   DL+  ++      +  +  ++I GLC    +  A  FL   
Sbjct: 337 TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSM 396

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                 P V+  N ++  Y + G    A  +  LML YG+ P+ ++ N LIHG    G +
Sbjct: 397 LKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRL 456

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
            +A    N+M    + PD  TY++L      L  +  A+++  ++L +G  PDI+TYT L
Sbjct: 457 IDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTEL 516

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           + G C  G +++   L   + + G  ++ + + +L     +  R  EA
Sbjct: 517 VRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 19/248 (7%)

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           +++ M   C +G +   L L ++M    + P  +T+  ++ GLCK   +++A  L+ +M 
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            +G +P+ ++YNT+I+  C   ++ KA  L N M  + + P   T NI++  LC  G + 
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243

Query: 536 NADCLL----VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------F 584
           N +  L    +   + N  L  V  T ++ +    G+V +A+  + +M +K        +
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303

Query: 585 EISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
            + IR    S        F C M+  G  PD      ++ A  + G      +L   M  
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363

Query: 637 SGLLPDKF 644
            G+ PD+ 
Sbjct: 364 GGVAPDQI 371


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 249/521 (47%), Gaps = 12/521 (2%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEVAKGLFCL 123
           T +I+IDGL +  R+ +A  + +E       P+  +   +++   K G  AE  +     
Sbjct: 194 TWTILIDGLFRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAER----- 247

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +L+    P   +Y  +I G C AG M +A     DM R G + D +TY+ L  G   L +
Sbjct: 248 VLQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQE 307

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG-FKLNVIAYS 242
           I  A+++++++      PDI TY +LI G C+   + E   L   + ++     NV++Y+
Sbjct: 308 IDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYN 367

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+    K+ R+++A  L  EM   G  PD+VTYS LIRGLC   +  +A     EM  K
Sbjct: 368 TLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGK 427

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
           +I P    + +++ GLC    +  A   FDS++ + C  ++ +YN +I G  K G + +A
Sbjct: 428 KILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDA 487

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
               +++ E+  SP  VT+ +LI G C+  +  +A  L       G+E S  +    + +
Sbjct: 488 KLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIAS 547

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
                  QR+L ++         PT   Y  VI+ LCK+  L EA QLLEDM   G+ PD
Sbjct: 548 LRCLEQAQRVLRVVL---ATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPD 604

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             T + ++ + C+      A   L +M     +P+  TY+ L++ L   G    A  +L 
Sbjct: 605 GSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLR 664

Query: 543 SLQEHNISLT-KVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            L  H      ++ Y  +I A+  +  V +A     ++  K
Sbjct: 665 RLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSK 705



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 153/596 (25%), Positives = 282/596 (47%), Gaps = 16/596 (2%)

Query: 26  DLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDA 82
           D + ++ TYN     L  T   +  + L+ +    E   +  T  I+I GLC   +L+ A
Sbjct: 85  DFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLA 144

Query: 83  ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
               +E   +   P V++   +++  CK G  E+A   F  M      P A ++ ILI G
Sbjct: 145 CSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSI---PCAATWTILIDG 201

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           L  A  ++EA  +  +M +H   P+  TY+++  G     +++ A +V+Q++ +    P 
Sbjct: 202 LFRAIRVDEACYYFEEM-KHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPV----PT 256

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           +  YT +I G+C+ G++ +   L E M  +G++ + + Y+ L+   C+   ID A  LL 
Sbjct: 257 LANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLE 316

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR-ISPNSFAHGAILLGLCEK 321
           EM++    PD+ TY ILI GLC+  ++ +A  L   + ++   +PN  ++  ++ G  + 
Sbjct: 317 EMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKA 376

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             + +A   F  ++ +    DVV Y+ +I G    G   EA     +++ K+I P +  +
Sbjct: 377 ARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVY 436

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           +S+I G C+ G++  A  + D++  +G +P+   Y + +   C+ G +      ++EM  
Sbjct: 437 SSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTE 496

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           +   P  VTY  +I GLC+  +  EA  L       G+   + + N +I S  +C  L +
Sbjct: 497 RGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASL-RC--LEQ 553

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A ++L  +      PT+  Y  +I+ LC   +L  A  LL  +    I         ++ 
Sbjct: 554 AQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVG 613

Query: 562 AHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIA 617
           A C +     AM F  +MV  G + S+  Y+ +    +   G P +  +    LI+
Sbjct: 614 AMCRQDKAVVAMAFLEEMVRLGSKPSVGTYS-TLLNALFKAGKPSEAHVVLRRLIS 668



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 255/566 (45%), Gaps = 42/566 (7%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR--------NVYT 65
           D +F   ++ E         + ++  N  +T ++  L    KV+E  R         +  
Sbjct: 200 DGLFRAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLAN 259

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + VI G C+   +  A   L++   K +    ++ N ++  +C+L   + A  L   M 
Sbjct: 260 YTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMK 319

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GRHGVEPDAITYSILAKGFHLLSQI 184
                PD F+Y+ILI GLC A  + EA +    +       P+ ++Y+ L  GF   +++
Sbjct: 320 SNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARV 379

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A+++  +++  G  PD+VTY+ LI G C  G   E     E M+ +     V  YS +
Sbjct: 380 NDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSV 439

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +S +C++G +D A  +   M A G +P+L  Y+ LI GLCK  ++  A     EM  +  
Sbjct: 440 ISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGC 499

Query: 305 SPNSFAHGAILLGLCEKEMITEA-RMYFDSL--------------IMS-NCIQD------ 342
           SP+   +G +++GLC      EA  +Y  SL              I S  C++       
Sbjct: 500 SPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLR 559

Query: 343 VVL----------YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
           VVL          Y  +I+   K  N+ EA QL   +I   I P   T ++L+   C+  
Sbjct: 560 VVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQD 619

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM-ETKAIGPTHVTY 451
           K   A   L+ +   G +PS  TY+T +NA  + G       +L+ +    +  P  + Y
Sbjct: 620 KAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWY 679

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             +I     Q +++EA  +L+++         + YNT+++   + ++L+  ++LL +M  
Sbjct: 680 VGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKR 739

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNA 537
           +      AT+NILI G C  G    A
Sbjct: 740 NEFVVNEATFNILIQGFCRLGQTDRA 765



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/521 (26%), Positives = 242/521 (46%), Gaps = 21/521 (4%)

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +YN     L   G  EEA     +     + PD+ITY IL +G     ++  A  + +++
Sbjct: 92  TYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEM 151

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           + +G  P ++T   L+   C+ GN+E  L+  E M S         +++L+  + ++ R+
Sbjct: 152 VDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPC---AATWTILIDGLFRAIRV 208

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
           DEA     EM+   + P+  TY+++I GL K  KV +A ++  EM      P    + ++
Sbjct: 209 DEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQEM----PVPTLANYTSV 263

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           + G C+   + +A    + +       D + YN +I G+ +L  I  A +L  ++     
Sbjct: 264 IGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDF 323

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH-GLEPSAVTYTTFMNAYCEEGNIQRLL 433
            P I T++ LI G C+  ++++AR LL T++      P+ V+Y T ++ + +   +    
Sbjct: 324 VPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAY 383

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            L  EM T    P  VTY+ +I+GLC   +  EA   LE+M    + P    Y+++I   
Sbjct: 384 QLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGL 443

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           C+  +L  A  + + M  +  +P  A YN LI GLC  G L +A   +  + E   S   
Sbjct: 444 CRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDG 503

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI----------SIR--DYTKSFFCMMLS 601
           V Y T+I   C      +A   + + +E+G EI          S+R  +  +    ++L+
Sbjct: 504 VTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLA 563

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            G  P       ++ +  +  +L    +L   MI +G+ PD
Sbjct: 564 TGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPD 604



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 241/536 (44%), Gaps = 41/536 (7%)

Query: 83  ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG 142
           + F      ++F  +V + N       + G  E A  LF       L PD+ +Y ILI G
Sbjct: 75  VFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRG 134

Query: 143 LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG-------------FHLLSQI--SGA 187
           LC  G ++ A     +M   G+ P  +T   L                F  +S I  +  
Sbjct: 135 LCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAAT 194

Query: 188 WKVIQKLLIKG----------------SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           W ++   L +                 + P+  TYTV+I G  + G V E     E +L 
Sbjct: 195 WTILIDGLFRAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEA----ERVLQ 250

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +     +  Y+ ++   CK+G + +A  LL +M+  G + D +TY+ LI G C+  ++ +
Sbjct: 251 EMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDR 310

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQDVVLYNIMI 350
           A +L  EM S    P+ F +  ++ GLC  + ++EAR    +L    +C  +VV YN +I
Sbjct: 311 AYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLI 370

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           DG+ K   + +A QL+ +++     P +VT+++LI G C  G+ ++A   L+ +    + 
Sbjct: 371 DGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKIL 430

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P    Y++ ++  C  G +     +   M      P    Y  +I GLCK  +L +A   
Sbjct: 431 PKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLR 490

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL-C 529
           +++M   G +PD +TY T+I   C+     +A  L  +     +E +  + N++I  L C
Sbjct: 491 VKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRC 550

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
               L+ A  +L  +     S T   Y T+I++ C E ++ +A      M+  G +
Sbjct: 551 ----LEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIK 602



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 178/397 (44%), Gaps = 44/397 (11%)

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           Q F+  V  Y+    ++ ++G+ +EA  L  E     L PD +TY ILIRGLC   K+  
Sbjct: 84  QDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKL 143

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNC------------ 339
           A  LY EM  + + P       +L  LC+   +  A  YF+ +    C            
Sbjct: 144 ACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLF 203

Query: 340 -------------------IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
                              I +   Y ++I+G VK G + EA     +++++   P++  
Sbjct: 204 RAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEA----ERVLQEMPVPTLAN 259

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           + S+I G CK G +  A  LL+ +K  G +   +TY T ++ +C    I R   LL+EM+
Sbjct: 260 YTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMK 319

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL-----EDMYVIGVTPDQITYNTIIRSFCK 495
           +    P   TY ++I GLC+  +L EA  LL     ED      TP+ ++YNT+I  F K
Sbjct: 320 SNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNED----DCTPNVVSYNTLIDGFSK 375

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              +  A+QL  +M      P   TY+ LI GLC  G    A   L  +    I      
Sbjct: 376 AARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPV 435

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           Y+++I   C  G++  A T F  MV  G + ++  Y 
Sbjct: 436 YSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYN 472



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 236/517 (45%), Gaps = 46/517 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRN 62
           + + G +  A  ++  MK    +    TYN+L++    L+  D  ++L +++K ++   +
Sbjct: 267 HCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPD 326

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKE-FGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++T  I+I GLC+  RL +A   L     ++   P+VVS N ++  + K      A  LF
Sbjct: 327 IFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLF 386

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-GR------------------- 161
             M+  G HPD  +Y+ LI GLC AG   EA  +  +M G+                   
Sbjct: 387 LEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRA 446

Query: 162 ---------------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
                          +G +P+   Y+ L  G     ++  A   ++++  +G  PD VTY
Sbjct: 447 GELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTY 506

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM-CKSGRIDEALGLLYEME 265
             LI G C+    +E   L    L QG +++  + +V+++S+ C    +++A  +L  + 
Sbjct: 507 GTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRC----LEQAQRVLRVVL 562

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
           A G  P    Y+ +I  LCK++ + +A QL  +M    I P+     A++  +C ++   
Sbjct: 563 ATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAV 622

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS-PSIVTFNSL 384
            A  + + ++       V  Y+ +++   K G   EA  + R+LI      P  + +  L
Sbjct: 623 VAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGL 682

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I  +    +V +AR +L  +K      S V Y T +       N+Q +  LL+EM+    
Sbjct: 683 IAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEF 742

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
                T+ ++I+G C+  +   AV++L +M  + +TP
Sbjct: 743 VVNEATFNILIQGFCRLGQTDRAVRVLSEMKKV-LTP 778


>gi|18420848|ref|NP_568460.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75154065|sp|Q8L6Y3.1|PP396_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g24830
 gi|22655280|gb|AAM98230.1| putative protein [Arabidopsis thaliana]
 gi|30725398|gb|AAP37721.1| At5g24830 [Arabidopsis thaliana]
 gi|332005984|gb|AED93367.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 593

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 240/450 (53%), Gaps = 5/450 (1%)

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
           +S ++  LC Q +L  A+   ++       P +++ N +++  CK G+ E A GL   M 
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G  P+  SYN LI GLC   ++++AL   N M ++G+ P+ +T +I+         I 
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243

Query: 186 GAWKVIQKLLIKGSDP----DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
              K + + ++  S      DIV  T+L+    + GNV + L++ + M  +    + + Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           +V++  +C SG +  A G + +M   G+ PD+ TY+ LI  LCK+ K  +A  L+  M +
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
             ++P+  ++  I+ GLC    +  A  +  S++ S+ + +V+L+N++IDGY + G+   
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ +   ++   + P++ T N+LI+G+ K G++ DA  + + ++   + P   TY   + 
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLG 483

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           A C  G+++    L  EM  +   P  +TYT +++GLC + +L++A  LL  +   G+T 
Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITI 543

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           D + +  + + + + +   +A+ L+ + WL
Sbjct: 544 DHVPFLILAKKYTRLQRPGEAY-LVYKKWL 572



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 192/384 (50%), Gaps = 4/384 (1%)

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C  G ++  L LR+ M+  G    +I ++ LL+ +CK+G I++A GL+ EM  +G  P+ 
Sbjct: 132 CLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNC 191

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           V+Y+ LI+GLC  + V KA+ L+N M    I PN      I+  LC+K +I         
Sbjct: 192 VSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLE 251

Query: 334 LIM----SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
            I+    +N   D+V+  I++D   K GN+ +A+++++++ +K +    V +N +I G C
Sbjct: 252 EILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLC 311

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
            +G +  A   +  +   G+ P   TY T ++A C+EG       L   M+   + P  +
Sbjct: 312 SSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQI 371

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           +Y V+I+GLC    +  A + L  M    + P+ + +N +I  + +  D   A  +LN M
Sbjct: 372 SYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLM 431

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
             + ++P   T N LI G    G L +A  +   ++   I      Y  ++ A C  G +
Sbjct: 432 LSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHL 491

Query: 570 HKAMTFFCQMVEKGFEISIRDYTK 593
             A   + +M+ +G +  I  YT+
Sbjct: 492 RLAFQLYDEMLRRGCQPDIITYTE 515



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 154/321 (47%)

Query: 53  DIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
           D   +  P ++   +I++D   +   +  A+   +E + K      V  N I+   C  G
Sbjct: 255 DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSG 314

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
               A G  C M+K G++PD F+YN LI  LC  G  +EA +    M   GV PD I+Y 
Sbjct: 315 NMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYK 374

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
           ++ +G  +   ++ A + +  +L     P+++ + V+I GY + G+    L +  +MLS 
Sbjct: 375 VIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSY 434

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G K NV   + L+    K GR+ +A  +  EM +  + PD  TY++L+   C    +  A
Sbjct: 435 GVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLA 494

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            QLY+EM  +   P+   +  ++ GLC K  + +A      +  +    D V + I+   
Sbjct: 495 FQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKK 554

Query: 353 YVKLGNIGEAVQLYRQLIEKR 373
           Y +L   GEA  +Y++ +  R
Sbjct: 555 YTRLQRPGEAYLVYKKWLATR 575



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 180/390 (46%), Gaps = 21/390 (5%)

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           L  +S ++R LC Q K+  A+ L  +M    + P    H  +L GLC+   I +A     
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVR 180

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +       + V YN +I G   + N+ +A+ L+  + +  I P+ VT N +++  C+ G
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240

Query: 393 KVA-DARRLLDTIKLHGLEPSA----VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            +  + ++LL+ I L   + +A    V  T  M++  + GN+ + L + +EM  K +   
Sbjct: 241 VIGNNNKKLLEEI-LDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPAD 299

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            V Y V+I+GLC    +  A   + DM   GV PD  TYNT+I + CK     +A  L  
Sbjct: 300 SVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHG 359

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
            M    + P   +Y ++I GLC++GD+  A+  L+S+ + ++    + +  +I  +   G
Sbjct: 360 TMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYG 419

Query: 568 DVHKAMTFFCQMVEKGFEIS-------IRDYTKSFFCM--------MLSNGFPPDQEICE 612
           D   A++    M+  G + +       I  Y K    +        M S    PD     
Sbjct: 420 DTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYN 479

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           ++L A    G L   F+L   M++ G  PD
Sbjct: 480 LLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 127/257 (49%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +++ ++     P +    +++I GLC    +  A  F+ +   +   P V + N ++S  
Sbjct: 286 EVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISAL 345

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK G  + A  L   M   G+ PD  SY ++I GLCI G +  A EF   M +  + P+ 
Sbjct: 346 CKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEV 405

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           + ++++  G+      S A  V+  +L  G  P++ T   LI GY + G + +   ++  
Sbjct: 406 LLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNE 465

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M S     +   Y++LL + C  G +  A  L  EM   G +PD++TY+ L+RGLC + +
Sbjct: 466 MRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGR 525

Query: 289 VHKAIQLYNEMCSKRIS 305
           + KA  L + + +  I+
Sbjct: 526 LKKAESLLSRIQATGIT 542



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 125/285 (43%), Gaps = 19/285 (6%)

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           +S++   C  GK+  A  L   +   G+ P  +T+   +N  C+ G I++   L++EM  
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK----CK 497
               P  V+Y  +IKGLC    + +A+ L   M   G+ P+++T N I+ + C+      
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
           + +K  + +      N         IL+D    NG++  A  +   + + N+    V Y 
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYN 304

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MMLSN 602
            II+  C+ G++  A  F C MV++G    +  Y    S  C              M + 
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           G  PDQ   +V++      GD+    E    M+KS LLP+  L N
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWN 409



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 3/228 (1%)

Query: 33  TYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN+L+  L      D   DL+  ++      +  +  ++I GLC    +  A  FL   
Sbjct: 337 TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSM 396

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                 P V+  N ++  Y + G    A  +  LML YG+ P+ ++ N LIHG    G +
Sbjct: 397 LKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRL 456

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
            +A    N+M    + PD  TY++L      L  +  A+++  ++L +G  PDI+TYT L
Sbjct: 457 IDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTEL 516

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           + G C  G +++   L   + + G  ++ + + +L     +  R  EA
Sbjct: 517 VRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 19/247 (7%)

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           +++ M   C +G +   L L ++M    + P  +T+  ++ GLCK   +++A  L+ +M 
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            +G +P+ ++YNT+I+  C   ++ KA  L N M  + + P   T NI++  LC  G + 
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243

Query: 536 NADCLL----VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------F 584
           N +  L    +   + N  L  V  T ++ +    G+V +A+  + +M +K        +
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303

Query: 585 EISIRDYTKS--------FFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
            + IR    S        F C M+  G  PD      ++ A  + G      +L   M  
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363

Query: 637 SGLLPDK 643
            G+ PD+
Sbjct: 364 GGVAPDQ 370


>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
          Length = 709

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 238/511 (46%), Gaps = 14/511 (2%)

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
           AG +  A+     M + G  PD    ++      +  ++  A +  +++   G DPD+VT
Sbjct: 176 AGKLRSAMRVLQLMQKDGCAPDICICNVAVNVLVVAGRVDKALEFAERMRRVGVDPDVVT 235

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           Y  LI G C    + E L++   ML  G   + I+Y  ++S +CK  R+ E   LL  M 
Sbjct: 236 YNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRVAEVWNLLERMR 295

Query: 266 A-VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              G+ PD +TY++LI GL K     +A+    E   KR   +   + AI+   C    +
Sbjct: 296 NDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHSFCLNGRM 355

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
           +EA+     +I   C  DVV Y+ ++DG+ ++G + +A ++ + + +    P+ VT  +L
Sbjct: 356 SEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTAL 415

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           + G CK GK ++A  LL+  +     PS +TY+  M+ +  EG +     ++ +M  K  
Sbjct: 416 LNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVMQMLQKGF 475

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            PT V   ++I  LCK+ K   A   +E     G   + + + T+I  F +  DL  A  
Sbjct: 476 FPTAVEINLLIHALCKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALS 535

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           LL+ M+L N  P   TY +++D L   G +K A  L+  +    +  T V Y T+I  +C
Sbjct: 536 LLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTYRTVIHRYC 595

Query: 565 AEGDVHKAMTFFCQMVEK-GFEISIRDYTK------------SFFCMMLSNGFPPDQEIC 611
            +G V   +    +M+ K GF  +     +            +    +L +    D + C
Sbjct: 596 EKGAVEDLLNLLDKMLTKQGFSSAYNQVIEKLCAFGKLSEAYNLLSKVLRSASKRDAQTC 655

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            +++ +F   G     + +A  M +  L+PD
Sbjct: 656 HILMDSFLNRGLPLQSYNVACRMFQRNLIPD 686



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 253/519 (48%), Gaps = 6/519 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSI---QTYNSLLYNLRHTDIMWDLYDDIKVSE 58
           L   YSR G +  A+ V+  M++      I       ++L      D   +  + ++   
Sbjct: 169 LMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNVAVNVLVVAGRVDKALEFAERMRRVG 228

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK-LGFAEVA 117
              +V T + +I GLC   R+ +A+  +         P  +S   +MS  CK    AEV 
Sbjct: 229 VDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRVAEVW 288

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L  +    G+ PD  +YN+LIHGL   G  +EAL F  +        D + YS +   
Sbjct: 289 NLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHS 348

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           F L  ++S A ++I +++ KG  PD+VTY+ ++ G+C+IG +++  K+ + M   G K N
Sbjct: 349 FCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPN 408

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + ++ LL+ +CK G+  EA  LL + E     P  +TYS+++ G  ++ K+ ++  +  
Sbjct: 409 TVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVM 468

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M  K   P +     ++  LC+++    A+ + +      C  +VV +  +I G+ + G
Sbjct: 469 QMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGFSRQG 528

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           ++  A+ L   +      P +VT+  ++    + GK+ +A  L++ +   GL P+ VTY 
Sbjct: 529 DLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTYR 588

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T ++ YCE+G ++ LL LL +M TK    +   Y  VI+ LC   KL EA  LL  +   
Sbjct: 589 TVIHRYCEKGAVEDLLNLLDKMLTKQGFSS--AYNQVIEKLCAFGKLSEAYNLLSKVLRS 646

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
               D  T + ++ SF       +++ +  +M+  NL P
Sbjct: 647 ASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQRNLIP 685


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 246/502 (49%), Gaps = 18/502 (3%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           S  A++   CK G  +    +   + + GL P   +YN+L+  LC +G +EEA      M
Sbjct: 13  SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 72

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNV 219
            + G+ P  +T+ IL  G     +      V+Q++   G  P+ V Y  LI  +C+ G+ 
Sbjct: 73  EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 132

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
            + L+L + M+ +  K   + Y+++  ++CK G ++ A  +L +M ++G+      ++ +
Sbjct: 133 SQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTV 192

Query: 280 IRGLCKQDK-VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA-RMYFDSL--- 334
           +  L ++ + +   + + NEM ++ + PN     A +  LC+     EA  ++F +L   
Sbjct: 193 VAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKG 252

Query: 335 ------------IMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
                       +++  I+ D + YNIMI G  K   + EA++L+  +  +   P + TF
Sbjct: 253 KYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTF 312

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N+L++ +C  GK+ +   LLD +K  GL+P  V+Y T ++ +C+  +I++    L E+  
Sbjct: 313 NTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMD 372

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           + + P    Y  +I G  +   +  A+  +E M   G+ P  +TY +++   C    + +
Sbjct: 373 RGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEE 432

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A  + +Q   +N++     Y I+I G C  G +  A      ++   IS  K+ YTT++ 
Sbjct: 433 AKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMY 492

Query: 562 AHCAEGDVHKAMTFFCQMVEKG 583
           A+   G+  +A   F +MV  G
Sbjct: 493 AYSKSGNSEEASKLFDEMVGSG 514



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 134/518 (25%), Positives = 247/518 (47%), Gaps = 55/518 (10%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N Y+ + +I  LC+  ++      L E       P+VV+ N +M   CK G  E A  L 
Sbjct: 10  NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLK 69

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+ P   ++ ILI+GL       E      +M + GV P+ + Y+ L  G+H  
Sbjct: 70  GRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI-GWHCR 128

Query: 182 -SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN--- 237
               S A ++  ++++K   P  VTY ++    C+ G +E   ++ E MLS G  ++   
Sbjct: 129 KGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGL 188

Query: 238 ---VIAY------------------------------SVLLSSMCKSGRIDEALGLLYE- 263
              V+A+                              +  +  +CK G+  EA+G+ ++ 
Sbjct: 189 FNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKT 248

Query: 264 ----------------MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
                           M   G++ D +TY+I+IRG CK  K+ +AI+L+ +M  +   P+
Sbjct: 249 LNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPD 308

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
            F    +L   C    + E     D +       D+V Y  +IDG+ K  +I +A +   
Sbjct: 309 LFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLT 368

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           +L+++ + P++  +N+LI G+ +NG ++ A   ++T+K +G++P+ VTY + M   C  G
Sbjct: 369 ELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAG 428

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            ++    +  +     +    + YT++I+G CK  K+ EAV   E+M   G++P+++TY 
Sbjct: 429 LVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYT 488

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           T++ ++ K  +  +A +L ++M    + P + TY  LI
Sbjct: 489 TLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 242/504 (48%), Gaps = 21/504 (4%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           + G V     ++A++    L+ ++ TYN L+  L      +  + L   ++      +V 
Sbjct: 23  KAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVV 82

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T  I+I+GL +  R  +  + LQE       P+ V  N ++  +C+ G    A  LF  M
Sbjct: 83  TFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEM 142

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD-AITYSILAKGFHLLSQ 183
           +   + P A +YN++   LC  G ME A     DM   G+     +  +++A       +
Sbjct: 143 VLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRR 202

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN-----------------VEEGLKLR 226
           +     +  +++ +G  P+    T  +   C+ G                  ++E  K+ 
Sbjct: 203 LESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVI 262

Query: 227 EVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           + ML++G +L+ I Y++++   CK  +++EA+ L  +M   G KPDL T++ L+   C  
Sbjct: 263 QTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNL 322

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            K+ +   L ++M ++ + P+  ++G I+ G C+ + I +A+ Y   L+      +V +Y
Sbjct: 323 GKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIY 382

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N +I GY + G+I  A+     +    I P+ VT+ SL+Y  C  G V +A+ +    + 
Sbjct: 383 NALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARE 442

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
           + ++   + YT  +  YC+ G +   +A  +EM ++ I P  +TYT ++    K    +E
Sbjct: 443 NNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEE 502

Query: 467 AVQLLEDMYVIGVTPDQITYNTII 490
           A +L ++M   GV PD ITY T+I
Sbjct: 503 ASKLFDEMVGSGVIPDNITYGTLI 526



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 226/515 (43%), Gaps = 103/515 (20%)

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           S+   LN  +Y+ ++ ++CK+G++D    +L E+   GL+P +VTY++L+  LCK  +V 
Sbjct: 4   SRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVE 63

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A +L   M    ++P+    G ++ GL   E   E  +    +       + V+YN +I
Sbjct: 64  EAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 123

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD-------- 402
             + + G+  +A++L+ +++ K++ P+ VT+N +    CK G++  A R+L+        
Sbjct: 124 GWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMT 183

Query: 403 ----------------TIKL------------HGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
                           T +L             G+ P+    T  M   C+ G  Q  + 
Sbjct: 184 VHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVG 243

Query: 435 L-----------------LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           +                 +Q M  K I    +TY ++I+G CK  K++EA++L  DM   
Sbjct: 244 IWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRR 303

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC-------- 529
           G  PD  T+NT++ ++C    + + F LL+QM    L+P   +Y  +IDG C        
Sbjct: 304 GFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKA 363

Query: 530 ---------------------------VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
                                       NGD+  A   + +++ + I  T V Y +++  
Sbjct: 364 KEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYW 423

Query: 563 HCAEGDVHKAMTFFCQMVEK-------GFEISIRDYTK--------SFFCMMLSNGFPPD 607
            C  G V +A T F Q  E        G+ I I+ Y K        ++F  M S G  P+
Sbjct: 424 MCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPN 483

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +     ++ A+ + G+     +L   M+ SG++PD
Sbjct: 484 KLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPD 518



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 219/481 (45%), Gaps = 66/481 (13%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTY----NSLLYNLRHTDIMWDLYDDIKVSETPRNV 63
           ++G V +A  +  +M++  +  S+ T+    N L    R  ++   L +  ++  +P  V
Sbjct: 58  KSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEV 117

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             N + I   C++     A+    E   K+  P+ V+ N I    CK G  E A+ +   
Sbjct: 118 IYNEL-IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILED 176

Query: 124 MLKYGLHPDAFSYNILIHGLC-IAGSMEEALEFTNDMGRHGVEPD--------------- 167
           ML  G+      +N ++  L      +E  +  TN+M   G+ P+               
Sbjct: 177 MLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGG 236

Query: 168 ------AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
                  I +  L KG ++      A KVIQ +L KG + D +TY ++I G C+   +EE
Sbjct: 237 KHQEAVGIWFKTLNKGKYMKE----ATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEE 292

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
            +KL   M  +GFK ++  ++ LL + C  G+++E   LL +M+  GL+PD+V+Y  +I 
Sbjct: 293 AIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIID 352

Query: 282 GLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG------------------------ 317
           G CK   + KA +   E+  + + PN F + A++ G                        
Sbjct: 353 GHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQP 412

Query: 318 -----------LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
                      +C   ++ EA+  F     +N    V+ Y IMI GY KLG + EAV  +
Sbjct: 413 TNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYF 472

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++  + ISP+ +T+ +L+Y + K+G   +A +L D +   G+ P  +TY T +    E+
Sbjct: 473 EEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEK 532

Query: 427 G 427
           G
Sbjct: 533 G 533



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 79/152 (51%)

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
           E++ +     +YT +IK LCK  K+    ++L +++  G+ P  +TYN ++ + CK   +
Sbjct: 3   ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
            +AF+L  +M    + P+  T+ ILI+GL           +L  +++  +S  +V Y  +
Sbjct: 63  EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNEL 122

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           I  HC +G   +A+  F +MV K  + +   Y
Sbjct: 123 IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTY 154


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 219/431 (50%), Gaps = 2/431 (0%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           ++  N I+    KL +      L   M   G+  +  + +ILI+  C  G M  +     
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            + + G  P+ IT++ L KG  L  ++        K++ +    + V+Y  L+ G C+ G
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
                +KL  ++  +  + NV+ YS ++  +CK   ++EA  L  EM+A  + P+++TY+
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            LI   C   ++  A  L +EM  K I+P+ +    ++  LC++     A+  F +++  
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQM 247

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
               +V  YNIMI+G  K   + EA+ L R+++ K + P  VT+NSLI G CK+G++  A
Sbjct: 248 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA 307

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
             L++ +   G     VTYT+ ++A C+  N+ +  AL  +M+ + I PT  TYT +I G
Sbjct: 308 LNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDG 367

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
           LCK  +L+ A +L + + V G   D  TY  +I   CK     +A  + ++M  +   P 
Sbjct: 368 LCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPN 427

Query: 518 SATYNILIDGL 528
           + T+ I+I  L
Sbjct: 428 AVTFEIIIRSL 438



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 218/413 (52%), Gaps = 2/413 (0%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           ++V+L+ +++ +C LG    +  L   +LK G  P+  ++  L+ GLC+ G +++ L F 
Sbjct: 44  NLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFH 103

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           + +     + + ++Y  L  G     +   A K+++ +  + + P++V Y+ +I G C+ 
Sbjct: 104 DKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKD 163

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
             V E   L   M ++    NVI Y+ L+ + C +G++  A  LL+EM    + PD+ T+
Sbjct: 164 KLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTF 223

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           SILI  LCK+ K   A Q+++ M    ++PN +++  ++ GLC+ + + EA      ++ 
Sbjct: 224 SILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH 281

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
            N + D V YN +IDG  K G I  A+ L  ++  +     +VT+ SL+   CKN  +  
Sbjct: 282 KNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDK 341

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  L   +K  G++P+  TYT  ++  C+ G ++    L Q +  K       TYTV+I 
Sbjct: 342 ATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMIS 401

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           GLCK+    EA+ +   M   G  P+ +T+  IIRS  +  +  KA +LL++M
Sbjct: 402 GLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 206/405 (50%), Gaps = 9/405 (2%)

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           +++ +KG + ++VT ++LI  +C +G +     L   +L  G+  N I ++ L+  +C  
Sbjct: 34  KQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLK 93

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G + + L    ++ A   + + V+Y  L+ GLCK  +   AI+L   +  +   PN   +
Sbjct: 94  GEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMY 153

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
            AI+ GLC+ +++ EA   +  +       +V+ YN +I  +   G +  A  L  ++I 
Sbjct: 154 SAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMIL 213

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K I+P + TF+ LI   CK GK  +A+++   +   G+ P+  +Y   +N  C+   +  
Sbjct: 214 KNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDE 271

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            + LL+EM  K + P  VTY  +I GLCK  ++  A+ L+ +M+  G   D +TY +++ 
Sbjct: 272 AMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLD 331

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
           + CK ++L KA  L  +M    ++PT  TY  LIDGLC  G LKNA  L   L      +
Sbjct: 332 ALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCI 391

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG-------FEISIR 589
               YT +I   C EG   +A+    +M + G       FEI IR
Sbjct: 392 DVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIR 436



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 234/468 (50%), Gaps = 30/468 (6%)

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           LL++ + P I+ +  ++    ++      + L + M  +G + N++  S+L++  C  G+
Sbjct: 2   LLVRHTSP-IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQ 60

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
           +  +  LL ++  +G  P+ +T++ L++GLC + +V K +  ++++ ++    N  ++G 
Sbjct: 61  MAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGT 120

Query: 314 ILLGLCE----KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
           +L GLC+    +  I   RM  D     N    VV+Y+ +IDG  K   + EA  LY ++
Sbjct: 121 LLNGLCKTGETRCAIKLLRMIEDRSTRPN----VVMYSAIIDGLCKDKLVNEAYDLYSEM 176

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG-N 428
             + I P+++T+N+LI  FC  G++  A  LL  + L  + P   T++  ++A C+EG N
Sbjct: 177 DAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKN 236

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
            +++   + +M    + P   +Y ++I GLCK  ++ EA+ LL +M    + PD +TYN+
Sbjct: 237 AKQIFHAMVQM---GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNS 293

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTS-ATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           +I   CK   +  A  L+N+M  H  +P    TY  L+D LC N +L  A  L + ++E 
Sbjct: 294 LIDGLCKSGRITSALNLMNEMH-HRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKER 352

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------- 597
            I  T   YT +I   C  G +  A   F  ++ KG  I +  YT   S  C        
Sbjct: 353 GIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEA 412

Query: 598 -----MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                 M  NG  P+    E+++ +  +  +     +L   MI  GLL
Sbjct: 413 LAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 211/426 (49%), Gaps = 38/426 (8%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K+   P N  T + ++ GLC +  ++  + F  +   + F  + VS   +++  CK G 
Sbjct: 72  LKLGYXP-NTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGE 130

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A  L  ++      P+   Y+ +I GLC    + EA +  ++M    + P+ ITY+ 
Sbjct: 131 TRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNT 190

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L   F L  Q+ GA+ ++ ++++K  +PD+ T+++LI   C+ G  +   ++   M+  G
Sbjct: 191 LICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMG 248

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              NV +Y+++++ +CK  R+DEA+ LL EM    + PD VTY+ LI GLCK  ++  A+
Sbjct: 249 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSAL 308

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            L NEM   R  P                                   DVV Y  ++D  
Sbjct: 309 NLMNEM-HHRGQP----------------------------------ADVVTYTSLLDAL 333

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K  N+ +A  L+ ++ E+ I P++ T+ +LI G CK G++ +A+ L   + + G     
Sbjct: 334 CKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDV 393

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            TYT  ++  C+EG     LA+  +ME     P  VT+ ++I+ L ++ +  +A +LL +
Sbjct: 394 WTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHE 453

Query: 474 MYVIGV 479
           M   G+
Sbjct: 454 MIAKGL 459



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 175/360 (48%), Gaps = 2/360 (0%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
            +D +       N  +   +++GLC+    + AI  L+    +   P+VV  +AI+   C
Sbjct: 102 FHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLC 161

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           K      A  L+  M    + P+  +YN LI   C+AG +  A    ++M    + PD  
Sbjct: 162 KDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVY 221

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           T+SIL     L  +   A ++   ++  G +P++ +Y ++I G C+   V+E + L   M
Sbjct: 222 TFSILIDA--LCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREM 279

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           L +    + + Y+ L+  +CKSGRI  AL L+ EM   G   D+VTY+ L+  LCK   +
Sbjct: 280 LHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNL 339

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
            KA  L+ +M  + I P  + + A++ GLC+   +  A+  F  L++  C  DV  Y +M
Sbjct: 340 DKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVM 399

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           I G  K G   EA+ +  ++ +    P+ VTF  +I    +  +   A +LL  +   GL
Sbjct: 400 ISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 160/317 (50%), Gaps = 23/317 (7%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL------------YNLRHTDIMWDLYDDIK 55
           +  +V++A  + ++M   ++  ++ TYN+L+            ++L H  I+ ++  D  
Sbjct: 162 KDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPD-- 219

Query: 56  VSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
                  VYT SI+ID LC++ +    I       G    P+V S N +++  CK    +
Sbjct: 220 -------VYTFSILIDALCKEGKNAKQIFHAMVQMG--VNPNVYSYNIMINGLCKCKRVD 270

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            A  L   ML   + PD  +YN LI GLC +G +  AL   N+M   G   D +TY+ L 
Sbjct: 271 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 330

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
                   +  A  +  K+  +G  P + TYT LI G C+ G ++   +L + +L +G  
Sbjct: 331 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 390

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           ++V  Y+V++S +CK G  DEAL +  +ME  G  P+ VT+ I+IR L ++D+  KA +L
Sbjct: 391 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 450

Query: 296 YNEMCSKRISPNSFAHG 312
            +EM +K +      HG
Sbjct: 451 LHEMIAKGLLGFRNFHG 467



 Score = 43.1 bits (100), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 55/118 (46%)

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M ++  T   I +N I+ S  K K       L  QM +  +E    T +ILI+  C  G 
Sbjct: 1   MLLVRHTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQ 60

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           +  +  LL  + +       + +TT++K  C +G+V K + F  ++V + F+ +   Y
Sbjct: 61  MAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSY 118


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 251/527 (47%), Gaps = 5/527 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV + +I+IDG C+   ++ A+ FL+E       P+  + ++I+  +CK G    A  +F
Sbjct: 43  NVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVF 102

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G  PD  ++N+L+ GL  A  + EA E    M   G +PD +TY+ +  G    
Sbjct: 103 AEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKW 162

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            ++  A  +++++  +   P  VTYT LI   C+   +++  ++ E M          AY
Sbjct: 163 KKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAY 222

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH-KAIQLYNEMC 300
           SVL + + ++G++ EA  +  +M    +     TYS+++ GL K D  + +A +L  EM 
Sbjct: 223 SVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMM 282

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K+I+P+ +A+  ++ GLC+     EA+  F  +        VV YN +++G +    + 
Sbjct: 283 GKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQ 342

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A++L   ++++   P   ++N +I GFC NG   +A  L   +   G+  +  TY   +
Sbjct: 343 DAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMI 402

Query: 421 NAYCEEGNIQRLLALLQEMET----KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
             + ++        L + M++    K   P   TY ++I  LCK  +++EA +LL  M  
Sbjct: 403 VGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRD 462

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G  P    +  ++    +   L  AF+L  +M   N +    + NIL+DG+   G +  
Sbjct: 463 KGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDE 522

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           A   L  + +  I   K  Y  ++   C +G   +A     ++V  G
Sbjct: 523 AKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 569



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 244/518 (47%), Gaps = 26/518 (5%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           ML+ GL P+A  YN LI  LC AG + EA  +   M +H   P+ ++Y+I+  G+     
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARN 59

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           I  A   ++++   G  P    Y+ ++  +C+ GNV + + +   M ++G + +++ ++V
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           LLS + ++ +I EA  L   M + G KPD+VTY+ +I GLCK  K+ +A+ L   M  + 
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           +SP    +  ++  LC+   + +A   F+ +    C      Y+++ +   + G + EA 
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEAS 239

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCK-NGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++Y  +  K +  +  T++ ++ G  K +G   +A +L+  +    + P    Y+  +N 
Sbjct: 240 RVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILING 299

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+         + QEM  + I PT VTY  +++GL    KLQ+A++L   M   G  PD
Sbjct: 300 LCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPD 359

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             +YN +IR FC   D  +A+ L   M    +   + TYN +I G   +    +A  L  
Sbjct: 360 TCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFK 419

Query: 543 SLQ----EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            +Q    +   +     Y  +I + C    V +A      M +KGF  S++         
Sbjct: 420 RMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLK--------- 470

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
                      I EV+L    + G L   FEL   M +
Sbjct: 471 -----------IWEVLLSRLARAGRLDDAFELYKEMSR 497



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/569 (26%), Positives = 262/569 (46%), Gaps = 25/569 (4%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+ +  N ++S  CK G    A+     M ++   P+  SYNI+I G C A ++E+AL F
Sbjct: 8   PNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAF 66

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M   G  P    YS + + F     +S A  V  ++  KG +PDIV + VL+ G  +
Sbjct: 67  LREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWR 126

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              + E  +L   M S+G K +V+ Y+ +++ +CK  ++DEA+ LL  M+   + P  VT
Sbjct: 127 ARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVT 186

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA-RMYFDSL 334
           Y+ LI  LCK  ++ +A +++ +M     +    A+  +   L     + EA R+Y D  
Sbjct: 187 YTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMC 246

Query: 335 IMSNCIQDVVLYNIMIDGYVKL--GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
             + C+ D   Y++++ G  K+  GN+ EA +L  +++ K+I+P    ++ LI G CK  
Sbjct: 247 RKNVCMTDNT-YSLVVLGLSKMDGGNV-EAAKLVTEMMGKKIAPDFYAYSILINGLCKAR 304

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           +  +A+ +   ++  G+ P+ VTY T +        +Q  + L   M  +   P   +Y 
Sbjct: 305 RPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYN 364

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
           ++I+G C      EA  L +DM   G+  +  TYN +I  F K +    A+ L  +M   
Sbjct: 365 LMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSG 424

Query: 513 NLE----PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
             +    P   TY ILI  LC    ++ A  LL ++++     +   +  ++      G 
Sbjct: 425 KNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGR 484

Query: 569 VHKAMTFF-------CQMVEKGFEISIR--------DYTKSFFCMMLSNGFPPDQEICEV 613
           +  A   +       CQ +     I +         D  K F   M   G  PD+   + 
Sbjct: 485 LDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDK 544

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +++     G      +L   +++ G  P+
Sbjct: 545 LVVGLCWQGKADQARKLVEELVRDGKRPE 573



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 128/544 (23%), Positives = 243/544 (44%), Gaps = 14/544 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRN 62
           + +TG V  A+ V A+M     +  I  +N LL   +  R      +L+  +       +
Sbjct: 89  FCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPD 148

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +I GLC+  +L +A+  L+    ++  P+ V+   ++   CK    + A  +F 
Sbjct: 149 VVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFE 208

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M +        +Y++L + L  AG + EA    +DM R  V     TYS++  G   LS
Sbjct: 209 KMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLG---LS 265

Query: 183 QISG----AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
           ++ G    A K++ +++ K   PD   Y++LI G C+     E  ++ + M  +G    V
Sbjct: 266 KMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTV 325

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y+ LL  +  + ++ +A+ L Y M   G  PD  +Y+++IRG C     ++A  L+ +
Sbjct: 326 VTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQD 385

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN----CIQDVVLYNIMIDGYV 354
           M    I  N++ +  +++G  + E  + A M F  +           ++  Y I+I    
Sbjct: 386 MIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLC 445

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K   + EA +L   + +K   PS+  +  L+    + G++ DA  L   +     +    
Sbjct: 446 KTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVG 505

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           +    ++     G++      L++M    I P   TY  ++ GLC Q K  +A +L+E++
Sbjct: 506 SSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 565

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G  P+      ++ + C   D + A++    +    +E T   +N L+   C+   L
Sbjct: 566 VRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCLARKL 625

Query: 535 KNAD 538
              D
Sbjct: 626 DYLD 629



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 195/420 (46%), Gaps = 22/420 (5%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           ML  G   N I Y+ L+S +CK+G + EA   L  M      P++V+Y+I+I G CK   
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARN 59

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           + KA+    EM      P   A+ +I+   C+   +++A   F  +    C  D+V +N+
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           ++ G  +   I EA +L+R +  +   P +VT+N++I G CK  K+ +A  LL+ +K   
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P+ VTYTT ++  C+   +Q+   + ++M       T   Y+V+   L +  KL EA 
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEAS 239

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR-KAFQLLNQMWLHNLEPTSATYNILIDG 527
           ++  DM    V     TY+ ++    K      +A +L+ +M    + P    Y+ILI+G
Sbjct: 240 RVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILING 299

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC       A  +   ++   IS T V Y T+++   +   +  AM              
Sbjct: 300 LCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMEL------------ 347

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                 ++F  ML  G  PD     +M+  F   GD    + L   MIK G++ + +  N
Sbjct: 348 ------TYF--MLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYN 399



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 4/217 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N++T  I+I  LC+  ++++A   L     K F PS+     ++SR  + G  + A  L+
Sbjct: 433 NMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELY 492

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M +        S NIL+ G+   GS++EA +F   M   G+ PD  TY  L  G    
Sbjct: 493 KEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQ 552

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A K++++L+  G  P+      L+   C  G+ +   +    + S G ++ +  +
Sbjct: 553 GKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMH 612

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           + L++S C + ++D  L ++ + E V   PD++   I
Sbjct: 613 NTLVTSCCLARKLD-YLDMIEQREGV---PDVIVERI 645


>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
 gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 158/610 (25%), Positives = 293/610 (48%), Gaps = 33/610 (5%)

Query: 16  VFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQ 75
           V VI  M   + KVS+    SLL NL       D+Y            YT+  +I     
Sbjct: 1   VAVIINMLGKEGKVSVAA--SLLNNLHKDGFEPDVY-----------AYTS--LITACVS 45

Query: 76  QSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA-EVAKGLFCLMLKYGLHPDAF 134
             R ++A++  ++   +   P++++ N I++ Y K+G       GLF  M   G+ PD +
Sbjct: 46  NGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEY 105

Query: 135 SYNILIHGLCIAGSM-EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
           +YN LI   C  GS+ EEA     DM   G  PD +TY+ L   +    +I  A +V+++
Sbjct: 106 TYNTLIT-CCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLRE 164

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           + + G  P IVTY  LI  Y + G +EE ++L+  M+ +G KL+V  Y+ +LS   ++G+
Sbjct: 165 MEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGK 224

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGA 313
            + A+ +  EM   G KP++ T++ LI+    + K  + ++++ E+      P+      
Sbjct: 225 DESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNT 284

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           +L    +  M +E    F  +     + +   YN +I  Y + G+  +A+ +Y+++++  
Sbjct: 285 LLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTG 344

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           I+P + T+N+++    + G    + ++L  ++    +P+ +T+ + ++AY     I R+L
Sbjct: 345 ITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRML 404

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
           AL +E+ +  I P  V    ++    K   L EA +   ++   G +PD  T N +I  +
Sbjct: 405 ALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIY 464

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
            + + + K  ++LN M      P+ ATYN L+     + + + ++ +L  +    I    
Sbjct: 465 GRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDI 524

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT--------KSFF-------CM 598
           ++Y T+I A+C  G + +A   F +M E G    +  Y          S F       C 
Sbjct: 525 ISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCY 584

Query: 599 MLSNGFPPDQ 608
           M+ +G  P+Q
Sbjct: 585 MIKHGCKPNQ 594



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/586 (22%), Positives = 251/586 (42%), Gaps = 4/586 (0%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVY 64
            G   +AV V  KM+E   K ++ TYN +L       + W+    L++ +K +    + Y
Sbjct: 46  NGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEY 105

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I    + S  ++A    ++     F P  V+ N ++  Y K    + A  +   M
Sbjct: 106 TYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREM 165

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G  P   +YN LI      G +EEA+E  N M   G++ D  TY+ +  GF    + 
Sbjct: 166 EVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKD 225

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +V +++   G  P+I T+  LI  +   G   E +K+ E +       +++ ++ L
Sbjct: 226 ESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTL 285

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L+   ++G   E  G+  EM+ VG  P+  TY+ LI    +     +A+ +Y  M    I
Sbjct: 286 LAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGI 345

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           +P+   + A+L  L    +  ++      +    C  + + +  ++  Y     IG  + 
Sbjct: 346 TPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLA 405

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L  ++    I P  V   +L+    K   + +A R    +K  G  P   T    +  Y 
Sbjct: 406 LAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYG 465

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
               + +   +L  M+     P+  TY  ++    +    + + ++L+++   G+ PD I
Sbjct: 466 RRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDII 525

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           +YNT+I ++C+   +++A  + ++M    L P   TYN  +     +   + A  ++  +
Sbjct: 526 SYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYM 585

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRD 590
            +H     +  Y ++I  +C       A+ F   + E    IS  D
Sbjct: 586 IKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFISSLHELDPHISRED 631



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/552 (24%), Positives = 248/552 (44%), Gaps = 43/552 (7%)

Query: 5   VYSRTGMVHDAVF-VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIK-VSET 59
           VY + GM  + +  +   MK   +     TYN+L+   R   +  +   +++D+K +   
Sbjct: 77  VYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFV 136

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P  V  N++ +D   +  R+++AI  L+E       PS+V+ N+++S Y + G  E A  
Sbjct: 137 PDKVTYNTL-LDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAME 195

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M++ G+  D F+Y  ++ G    G  E A+    +M   G +P+  T++ L K   
Sbjct: 196 LKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHG 255

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              + +   KV +++ I    PDIVT+  L+  + Q G   E   + + M   GF     
Sbjct: 256 NRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERD 315

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR------------------ 281
            Y+ L+S+  + G  D+A+ +   M   G+ PDL TY+ ++                   
Sbjct: 316 TYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEM 375

Query: 282 --GLCKQDK---------------VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
             G+CK ++               + + + L  E+CS  I P++     ++L   + +++
Sbjct: 376 QDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLL 435

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            EA   F  L       D+   N MI  Y +   + +  ++   + E   +PS+ T+NSL
Sbjct: 436 LEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSL 495

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           +Y   ++     +  +L  I   G++P  ++Y T + AYC  G ++    +  EM    +
Sbjct: 496 MYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGL 555

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  +TY   +         +EA+ ++  M   G  P+Q TYN++I  +CK      A +
Sbjct: 556 IPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIK 615

Query: 505 LLNQMWLHNLEP 516
            ++   LH L+P
Sbjct: 616 FISS--LHELDP 625



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/560 (24%), Positives = 246/560 (43%), Gaps = 28/560 (5%)

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           K G   VA  L   + K G  PD ++Y  LI      G   EA+     M   G +P  I
Sbjct: 10  KEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLI 69

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLL----IKGSDPDIVTYTVLICGYCQIGNV-EEGLK 224
           TY+++    ++  ++   W  I  L       G  PD  TY  LI   C+ G++ EE   
Sbjct: 70  TYNVI---LNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITC-CRRGSLYEEAAA 125

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           + E M S GF  + + Y+ LL    KS RI EA+ +L EME  G  P +VTY+ LI    
Sbjct: 126 VFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYA 185

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           +   + +A++L N+M  + I  + F + A+L G         A   F+ +  + C  ++ 
Sbjct: 186 RDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNIC 245

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            +N +I  +   G   E ++++ ++      P IVT+N+L+  F +NG  ++   +   +
Sbjct: 246 TFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 305

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           K  G  P   TY T ++AY   G+  + +A+ + M    I P   TY  V+  L +    
Sbjct: 306 KRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLW 365

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN-- 522
           +++ ++L +M      P+++T+ +++ ++   K++ +   L  ++    +EP +      
Sbjct: 366 EQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTL 425

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           +L++  C    L  A+   + L+    S        +I  +     V K       M E 
Sbjct: 426 VLVNSKC--DLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKES 483

Query: 583 GFEISIRDY---------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
           GF  S+  Y               ++     +L+ G  PD      ++ A+ + G +   
Sbjct: 484 GFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEA 543

Query: 628 FELAAVMIKSGLLPDKFLIN 647
             + + M +SGL+PD    N
Sbjct: 544 SHIFSEMRESGLIPDVITYN 563



 Score = 40.4 bits (93), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 7/89 (7%)

Query: 4   FVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDD-----IKVSE 58
           F Y R G + +A  + ++M+E  L   + TYN+ + +    D M++   D     IK   
Sbjct: 532 FAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASY-AADSMFEEAIDVVCYMIKHGC 590

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQ 87
            P     NS VIDG C+ +R  DAI F+ 
Sbjct: 591 KPNQNTYNS-VIDGYCKLNRRDDAIKFIS 618


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/603 (25%), Positives = 265/603 (43%), Gaps = 31/603 (5%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLY---DDIKVSETPRNVY 64
           R G  + A+  + ++K+   K S  TYN+L+      D +   Y    ++       + Y
Sbjct: 188 RNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRY 247

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S     LC+  + ++A   + E   ++F P  V  N ++S  C+    E A  +   M
Sbjct: 248 TLSCFAYSLCKGGKCREAFDLIDE--AEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRM 305

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
                 P+  +Y IL+ G    G +       + M   G  P+   ++ L   +      
Sbjct: 306 RSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDY 365

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL--------KLREVMLSQGFKL 236
           S A+K+ +K++  G  P  + Y + I   C   N E+          K    ML  G  L
Sbjct: 366 SYAYKLFKKMIKCGCQPGYLVYNIFIGSVC--SNEEQPSSDILDLVEKAYSEMLDLGVVL 423

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N +  S     +C +G+ D+A  ++ EM   G  PD  TYS +I  LC   KV KA  L+
Sbjct: 424 NKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLF 483

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            EM    I P+ + +  ++   C+  +I +AR +FD ++   C  +VV Y  +I  Y+K 
Sbjct: 484 EEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKA 543

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA----RRLLDTIKLHGLE-- 410
             +  A +L+  ++ +   P++VT+ +LI G CK G++  A     R+   I+   ++  
Sbjct: 544 KQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKY 603

Query: 411 ----------PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
                     P+ +TY   ++  C+   ++    LL  M      P  + Y  VI G CK
Sbjct: 604 FKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCK 663

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT 520
             KLQ+A ++   M   G +P+  TY++ I    K   L    ++L++M  ++  P    
Sbjct: 664 IGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVI 723

Query: 521 YNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMV 580
           Y  ++DGLC  G    A  L++ ++E   +   V YT +I      G + + +  F  M 
Sbjct: 724 YTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMC 783

Query: 581 EKG 583
            KG
Sbjct: 784 SKG 786



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 155/549 (28%), Positives = 267/549 (48%), Gaps = 30/549 (5%)

Query: 67  SIVIDGLC-QQSRLQDAILFLQETAGKEFGPSVVSLNAI-MSRY----CKLGFAEVAKGL 120
           +I I  +C  + +    IL L E A  E     V LN + +S +    C  G  + A  +
Sbjct: 388 NIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKI 447

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
            C M+  G  PD  +Y+ +I  LC A  +E+A     +M R+G+ P   TY+IL   F  
Sbjct: 448 ICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCK 507

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              I  A K   ++L KG  P++VTYT LI  Y +   +    +L E+ML +G K NV+ 
Sbjct: 508 AGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVT 567

Query: 241 YSVLLSSMCKSGRIDEALGLLYEM----EAVGLK------------PDLVTYSILIRGLC 284
           Y+ L+   CK+G+I++A  +   M    E+  +             P+++TY  L+ GLC
Sbjct: 568 YTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLC 627

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K ++V +A +L + M +    PN   + A++ G C+   + +A+  F  +       ++ 
Sbjct: 628 KANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLY 687

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            Y+  ID   K   +   +++  +++E   +P++V +  ++ G CK GK  +A +L+  +
Sbjct: 688 TYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKM 747

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           +  G  P+ VTYT  ++ + + G I++ L L ++M +K   P  +TY V+I   C    L
Sbjct: 748 EEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLL 807

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            EA +LL++M         +++  II  F +  +   +  LL+++  +   P  + Y IL
Sbjct: 808 DEAYKLLDEMKQTYWPKHILSHRKIIEGFSQ--EFITSIGLLDELSENESVPVDSLYRIL 865

Query: 525 IDGLCVNGDLKNADCLL---VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           ID     G L+ A  LL    S   H +S  K  Y ++I+       V KA+  +  M+ 
Sbjct: 866 IDNYIKAGRLEVALDLLEEISSSPSHAVS-NKYLYASLIENLSHASKVDKALELYASMIS 924

Query: 582 KGF--EISI 588
           K    E+SI
Sbjct: 925 KNVVPELSI 933



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 138/543 (25%), Positives = 243/543 (44%), Gaps = 46/543 (8%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD   YN ++ GLC A   EEA++  + M      P+ +TY IL  G     Q+    ++
Sbjct: 277 PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRI 336

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
           +  ++ +G  P+   +  LI  YC+  +     KL + M+  G +   + Y++ + S+C 
Sbjct: 337 LSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCS 396

Query: 251 ------SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
                 S  +D       EM  +G+  + V  S   R LC   K  +A ++  EM  K  
Sbjct: 397 NEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGF 456

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+   +  ++  LC+   + +A   F+ +  +  +  V  Y I+ID + K G I +A +
Sbjct: 457 VPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARK 516

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
            + +++ K  +P++VT+ +LI+ + K  ++  A  L + + L G +P+ VTYT  ++ +C
Sbjct: 517 WFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHC 576

Query: 425 EEGNIQRLLALLQEME----------------TKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + G I++   +   M                     GP  +TY  ++ GLCK  +++EA 
Sbjct: 577 KAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAH 636

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +LL+ M   G  P+QI Y+ +I  FCK   L+ A ++  +M      P   TY+  ID L
Sbjct: 637 ELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCL 696

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
             +  L     +L  + E++ +   V YT ++   C  G   +A     +M EKG   ++
Sbjct: 697 FKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNV 756

Query: 589 RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD----KF 644
             YT                     M+  F + G +    EL   M   G  P+    + 
Sbjct: 757 VTYT--------------------AMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRV 796

Query: 645 LIN 647
           LIN
Sbjct: 797 LIN 799



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 157/621 (25%), Positives = 268/621 (43%), Gaps = 60/621 (9%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSE--TPRN 62
           V+ R   +  A  V  +M      +   T +   Y+L       + +D I  +E   P  
Sbjct: 220 VFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDFVPDT 279

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V+ N +V  GLC+ S  ++A+  L         P+VV+   ++S   + G     K +  
Sbjct: 280 VFYNRMV-SGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILS 338

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL-------- 174
           +M+  G +P+   +N LIH  C +     A +    M + G +P  + Y+I         
Sbjct: 339 MMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNE 398

Query: 175 ---------------------------------AKGFHLLSQISGAWKVIQKLLIKGSDP 201
                                            A+      +   A+K+I +++ KG  P
Sbjct: 399 EQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVP 458

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D  TY+ +I   C    VE+   L E M   G   +V  Y++L+ S CK+G I +A    
Sbjct: 459 DDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWF 518

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            EM   G  P++VTY+ LI    K  ++  A +L+  M  +   PN   + A++ G C+ 
Sbjct: 519 DEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKA 578

Query: 322 EMITEA-----RMYFD----------SLIMSNCI-QDVVLYNIMIDGYVKLGNIGEAVQL 365
             I +A     RM  D           L  +NC   +V+ Y  ++DG  K   + EA +L
Sbjct: 579 GQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHEL 638

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
              ++     P+ + ++++I GFCK GK+ DA+ +   +   G  P+  TY++F++   +
Sbjct: 639 LDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFK 698

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +  +  +L +L +M   +  P  V YT ++ GLCK  K  EA +L+  M   G  P+ +T
Sbjct: 699 DNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVT 758

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           Y  +I  F K   + +  +L   M      P   TY +LI+  C NG L  A  LL  ++
Sbjct: 759 YTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMK 818

Query: 546 EHNISLTKVAYTTIIKAHCAE 566
           +       +++  II+    E
Sbjct: 819 QTYWPKHILSHRKIIEGFSQE 839



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 134/578 (23%), Positives = 239/578 (41%), Gaps = 74/578 (12%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N L+   C  G    ALE    +   G +P   TY+ L + F    ++  A+ V +++L 
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
                D  T +      C+ G   E   L  +  ++ F  + + Y+ ++S +C++   +E
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDL--IDEAEDFVPDTVFYNRMVSGLCEASLFEE 297

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+ +L+ M +    P++VTY IL+ G  ++ ++ +  ++ + M ++   PN     +++ 
Sbjct: 298 AMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIH 357

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI-------------------DGYVKL- 356
             C+    + A   F  +I   C    ++YNI I                     Y ++ 
Sbjct: 358 AYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEML 417

Query: 357 ---------------------GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                                G   +A ++  +++ K   P   T++ +I   C   KV 
Sbjct: 418 DLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVE 477

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L + +K +G+ PS  TYT  ++++C+ G IQ+      EM  K   P  VTYT +I
Sbjct: 478 KAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALI 537

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW----- 510
               K  ++  A +L E M + G  P+ +TY  +I   CK   + KA Q+  +M      
Sbjct: 538 HAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIES 597

Query: 511 ----------LHNLE-PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
                      +N E P   TY  L+DGLC    +K A  LL ++  H     ++ Y  +
Sbjct: 598 SDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAV 657

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM---------------MLSNGF 604
           I   C  G +  A   F +M E+G+  ++  Y+    C+               ML N  
Sbjct: 658 IDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSC 717

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            P+  I   M+    + G     ++L   M + G  P+
Sbjct: 718 TPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPN 755



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 213/479 (44%), Gaps = 61/479 (12%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           + L++++K +    +VYT +I+ID  C+   +Q A  +  E   K   P+VV+  A++  
Sbjct: 480 FSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHA 539

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME----------------- 150
           Y K     VA  LF +ML  G  P+  +Y  LI G C AG +E                 
Sbjct: 540 YLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSD 599

Query: 151 ----------------------------------EALEFTNDMGRHGVEPDAITYSILAK 176
                                             EA E  + M  HG EP+ I Y  +  
Sbjct: 600 MDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVID 659

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           GF  + ++  A +V  K+  +G  P++ TY+  I    +   ++  LK+   ML      
Sbjct: 660 GFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTP 719

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NV+ Y+ ++  +CK G+ DEA  L+ +ME  G  P++VTY+ +I G  K  K+ + ++L+
Sbjct: 720 NVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELF 779

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +MCSK  +PN   +  ++   C   ++ EA    D +  +   + ++ +  +I+G+ + 
Sbjct: 780 RDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQ- 838

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS-AVT 415
                ++ L  +L E    P    +  LI  + K G++  A  LL+ I      PS AV+
Sbjct: 839 -EFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEI---SSSPSHAVS 894

Query: 416 ----YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
               Y + +        + + L L   M +K + P       +IKGL K  K QEA+QL
Sbjct: 895 NKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQL 953



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/354 (21%), Positives = 140/354 (39%), Gaps = 58/354 (16%)

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI------------------- 385
           L N ++    + G    A++   +L +    PS  T+N+LI                   
Sbjct: 178 LLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREM 237

Query: 386 ----------------YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
                           Y  CK GK  +A  L+D  +     P  V Y   ++  CE    
Sbjct: 238 LSYAFVMDRYTLSCFAYSLCKGGKCREAFDLID--EAEDFVPDTVFYNRMVSGLCEASLF 295

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           +  + +L  M + +  P  VTY +++ G  ++ +L    ++L  M   G  P++  +N++
Sbjct: 296 EEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSL 355

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN- 548
           I ++CK +D   A++L  +M     +P    YNI I  +C N +  ++D L +  + ++ 
Sbjct: 356 IHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSE 415

Query: 549 -----ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------- 593
                + L KV  +   +  C  G   +A    C+M+ KGF      Y+K          
Sbjct: 416 MLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASK 475

Query: 594 -----SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                S F  M  NG  P      +++ +F + G +    +    M+  G  P+
Sbjct: 476 VEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPN 529



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 142/304 (46%), Gaps = 7/304 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRN 62
           + + G + DA  V  KM E     ++ TY+S    L+     D++  +   +  +    N
Sbjct: 661 FCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPN 720

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V   + ++DGLC+  +  +A   + +   K   P+VV+  A++  + K G  E    LF 
Sbjct: 721 VVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFR 780

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M   G  P+  +Y +LI+  C  G ++EA +  ++M +       +++  + +GF    
Sbjct: 781 DMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFS--Q 838

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL--NVIA 240
           +   +  ++ +L    S P    Y +LI  Y + G +E  L L E + S       N   
Sbjct: 839 EFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYL 898

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+ ++  + ++D+AL L   M +  + P+L     LI+GL K DK  +A+QL + +C
Sbjct: 899 YASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSIC 958

Query: 301 SKRI 304
              I
Sbjct: 959 QMDI 962



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 87/224 (38%), Gaps = 22/224 (9%)

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C  G     L  L  ++     P+  TY  +I+   +  KL  A  +  +M       D+
Sbjct: 187 CRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDR 246

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            T +    S CK    R+AF L+++    +  P +  YN ++ GLC     + A  +L  
Sbjct: 247 YTLSCFAYSLCKGGKCREAFDLIDEA--EDFVPDTVFYNRMVSGLCEASLFEEAMDILHR 304

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNG 603
           ++  +     V Y  ++     +G + +                     K    MM++ G
Sbjct: 305 MRSSSCIPNVVTYRILLSGCLRKGQLGRC--------------------KRILSMMITEG 344

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             P++EI   ++ A+ +  D    ++L   MIK G  P   + N
Sbjct: 345 CYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYN 388


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 242/502 (48%), Gaps = 18/502 (3%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M + G +P  +TY++L +     S    A  V+ ++  KG  P+IVTY V+I G C+ G 
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           V++  ++   + S GF+ ++++Y+ +L  +C + R D+   L  EM      P+ VT+ +
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           L+R  C+   V +AIQ+  +M     +PN+     ++  +C++  + +A  + +++ M  
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           C  D + Y  ++ G  + G    A +L  +++ K   P+ VTFN+ I   C+ G +  A 
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           +L++ +  +G     VTY   ++ +C +G +   L L   +  +   P  +TYT ++ GL
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGL 474

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           C   +L  A +LL +M       + +T+N ++  FC+   + +A +L+NQM  H   P  
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 534

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            T+N L+DG+  + + + A  LL  L    +SL  + Y++++     E    +A+     
Sbjct: 535 ITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHA 594

Query: 579 MVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           + + G    +  Y K                FF  M+SNG  P++    +++      G 
Sbjct: 595 VQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGL 654

Query: 624 LGSVFELAAVMIKSGLLPDKFL 645
           L     + + +   G+L    L
Sbjct: 655 LKEARYVLSELYAKGVLSKSLL 676



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 236/482 (48%), Gaps = 34/482 (7%)

Query: 96  PSVVSLNAIMSRYCKL-GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
           PSVV+   ++   CK  GF E A  +   M   G  P+  +YN++I+G+C  G +++A E
Sbjct: 185 PSVVTYTVLLEAVCKSSGFGE-AMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKE 243

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
             N +  +G +PD ++Y+ + KG     +      +  +++ K   P+ VT+ +L+  +C
Sbjct: 244 ILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFC 303

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           + G VE  +++ + M   G   N    +++++++CK GR+D+A   L  M   G  PD +
Sbjct: 304 RGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTI 363

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           +Y+ ++RGLC+  +   A +L  EM  K   PN       +  LC+K +I +A    + +
Sbjct: 364 SYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELM 423

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL------------------------- 369
               C   +V YN ++ G+   G +  A++L+  L                         
Sbjct: 424 PEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAA 483

Query: 370 -------IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
                  I+K    + VTFN L+  FC+ G V +A  L++ +  HG  P+ +T+ T ++ 
Sbjct: 484 AELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDG 543

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
             ++ N +  L LL  + +K +    +TY+ V+  L ++ + +EA+Q+L  +  +G+ P 
Sbjct: 544 ITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPK 603

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
              YN I+ + CK  +  +A      M  +   P  +TY ILI+GL   G LK A  +L 
Sbjct: 604 VGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLS 663

Query: 543 SL 544
            L
Sbjct: 664 EL 665



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 226/460 (49%), Gaps = 3/460 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           ML+ G  P   +Y +L+  +C +    EA+   ++M   G  P+ +TY+++  G     +
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A +++ +L   G  PDIV+YT ++ G C     ++   L   M+ +    N + + +
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           L+   C+ G ++ A+ +L +M   G  P+    +I+I  +CKQ +V  A    N M    
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +P++ ++  +L GLC       A+     ++  NC  + V +N  I    + G I +A+
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +L   + E   S  IVT+N+L++GFC  G+V  A  L + +     EP+ +TYTT +   
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGL 474

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C    +     LL EM  K      VT+ V++   C++  ++EA++L+  M   G TP+ 
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 534

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           IT+NT++    K  +  +A +LL+ +    +   + TY+ ++D L      + A  +L +
Sbjct: 535 ITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHA 594

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +Q+  +      Y  I+ A C   +  +A+ FF  MV  G
Sbjct: 595 VQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNG 634



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 214/475 (45%), Gaps = 41/475 (8%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R G V DA  ++ ++     +  I +Y ++L  L   R  D +  L+ ++   +   N  
Sbjct: 234 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 293

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T  +++   C+   ++ AI  LQ+ +     P+    N +++  CK G  + A      M
Sbjct: 294 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 353

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             YG +PD  SY  ++ GLC AG  E A E   +M R                       
Sbjct: 354 GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVR----------------------- 390

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
                       K   P+ VT+   IC  CQ G +E+ +KL E+M   G  + ++ Y+ L
Sbjct: 391 ------------KNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNAL 438

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   C  GR+D AL L   +     +P+ +TY+ L+ GLC  +++  A +L  EM  K  
Sbjct: 439 VHGFCVQGRVDSALELFNNLPC---EPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDC 495

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             N+     ++   C+K  + EA    + ++   C  +++ +N ++DG  K  N  EA++
Sbjct: 496 PLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALE 555

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L   L+ K +S   +T++S++    +  +  +A ++L  ++  G+ P    Y   + A C
Sbjct: 556 LLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALC 615

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +     + +     M +    P   TY ++I+GL  +  L+EA  +L ++Y  GV
Sbjct: 616 KRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 670



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 157/349 (44%), Gaps = 15/349 (4%)

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
           C  R +P      +   G       +  R    +++   C   VV Y ++++   K    
Sbjct: 147 CPSRPTPTPTRPSS---GASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGF 203

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           GEA+ +  ++  K  +P+IVT+N +I G C+ G+V DA+ +L+ +  +G +P  V+YTT 
Sbjct: 204 GEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTV 263

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           +   C       +  L  EM  K   P  VT+ ++++  C+   ++ A+Q+L+ M   G 
Sbjct: 264 LKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGC 323

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
           TP+    N +I + CK   +  A+  LN M ++   P + +Y  ++ GLC  G  ++A  
Sbjct: 324 TPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKE 383

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC 597
           LL  +   N    +V + T I   C +G + +A+     M E G  + I  Y      FC
Sbjct: 384 LLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFC 443

Query: 598 MM--------LSNGFP--PDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           +         L N  P  P+      +L        L +  EL A MI+
Sbjct: 444 VQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQ 492



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/374 (23%), Positives = 169/374 (45%), Gaps = 45/374 (12%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL--------RHTDIMWDLYD 52
           ML   + R GMV  A+ V+ +M +        T N+ L N+           D  +D  +
Sbjct: 297 MLVRFFCRGGMVERAIQVLQQMSQHGC-----TPNTTLCNIVINAICKQGRVDDAYDFLN 351

Query: 53  DIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG 112
           ++ +     +  + + V+ GLC+  R + A   L E   K   P+ V+ N  +   C+ G
Sbjct: 352 NMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKG 411

Query: 113 FAEVAKGLFCLMLKYGL--------------------------------HPDAFSYNILI 140
             E A  L  LM +YG                                  P+  +Y  L+
Sbjct: 412 LIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLL 471

Query: 141 HGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD 200
            GLC A  ++ A E   +M +     +A+T+++L   F     +  A +++ +++  G  
Sbjct: 472 TGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCT 531

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P+++T+  L+ G  +  N EE L+L   ++S+G  L+ I YS ++  + +  R +EA+ +
Sbjct: 532 PNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQM 591

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L+ ++ +G++P +  Y+ ++  LCK+ +  +AI  +  M S    PN   +  ++ GL  
Sbjct: 592 LHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAH 651

Query: 321 KEMITEARMYFDSL 334
           + ++ EAR     L
Sbjct: 652 EGLLKEARYVLSEL 665



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 6/268 (2%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
           +  + G++  A+ +I  M E    V I TYN+L++        D   +L++++       
Sbjct: 406 ILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEP--- 462

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  T + ++ GLC   RL  A   L E   K+   + V+ N ++S +C+ GF E A  L 
Sbjct: 463 NTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELV 522

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M+++G  P+  ++N L+ G+    + EEALE  + +   GV  D ITYS +       
Sbjct: 523 NQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRE 582

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A +++  +   G  P +  Y  ++   C+    ++ +     M+S G   N   Y
Sbjct: 583 DRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTY 642

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGL 269
            +L+  +   G + EA  +L E+ A G+
Sbjct: 643 IILIEGLAHEGLLKEARYVLSELYAKGV 670


>gi|242055653|ref|XP_002456972.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
 gi|241928947|gb|EES02092.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
          Length = 821

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 152/606 (25%), Positives = 279/606 (46%), Gaps = 65/606 (10%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLL--------YNLRHTDIM-WDLYDDIKVSETPRNVY 64
           +A  V   M E+ +K+ +Q Y+S +        Y+L +  +  + +  +I     P   +
Sbjct: 241 EAFRVWVGMIEMGVKLDVQGYSSFIIGLCDCGKYDLAYNMVRRYAVLQEISQERVPIEAF 300

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             ++VIDGLC++ +L++                                   A+ +  + 
Sbjct: 301 AYNMVIDGLCKEMKLEE-----------------------------------AEKVLEIK 325

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            ++G  PD + Y+ LIH  C  G++E+A     DM  HG+E +      L +    L  I
Sbjct: 326 TRHGSTPDLYGYSYLIHSHCKMGNLEKAWYHIEDMVSHGIEINCHIVGSLLQCLRKLGMI 385

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           S      QK    G   D V Y V +  YC++GN+ E +KL   M++ G   + I Y+ L
Sbjct: 386 SEVIVHFQKFRDLGLHLDGVLYNVAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCL 445

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++  C  G  + A  +  +M    +KPD+VTY+IL  G  +   V K   L   M  + +
Sbjct: 446 INGYCLKGETENAWQVFEQMLKANIKPDVVTYNILSSGYSRNGLVMKVFDLLEHMMDQGL 505

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV-VLYNIMIDGYVKLGNIGEAV 363
            PNS  +G  + G C    ++EA + F+ ++    I ++ VLY+ M+ GY+  G    A 
Sbjct: 506 EPNSLTYGIAIAGFCRGGNLSEAEVLFN-IVEEKGIDNIDVLYSSMVCGYLHSGWTDHAY 564

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L+ ++ ++      ++ + LI G C++ KV +A  +   +    + P  ++Y+  ++AY
Sbjct: 565 MLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTVCSMMLEKNVVPHVISYSKLISAY 624

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+  +++       +M  + +      YT+++ G CK  +LQEA +L   M  +G+ PD 
Sbjct: 625 CQSRDMRNAHLWFHDMVERGLSDV-TAYTILMNGYCKVGQLQEACELFVQMVNLGIKPDV 683

Query: 484 ITYNTIIRSFCKCKDLRKAFQ-----------------LLNQMWLHNLEPTSATYNILID 526
           + Y  ++    K + L++ +Q                 LL+ M    +EP    Y +LI 
Sbjct: 684 VAYTVLLDGHLK-ETLQQGWQGIAKERRTFFLRTKHKVLLSSMKEMEIEPDVTCYTVLIY 742

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           G C    L+ A  L   +    ++    AYTT+I  +C++G++ KA   F +M++KG + 
Sbjct: 743 GQCKAEYLEEARGLFDEMLAKGLTPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKGMKP 802

Query: 587 SIRDYT 592
            +  ++
Sbjct: 803 DVLSFS 808



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 149/580 (25%), Positives = 264/580 (45%), Gaps = 38/580 (6%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT--- 156
           SLN +     +   A+ A  ++  M++ G+  D   Y+  I GLC  G  + A       
Sbjct: 225 SLNIVTRSLFQANKADEAFRVWVGMIEMGVKLDVQGYSSFIIGLCDCGKYDLAYNMVRRY 284

Query: 157 ---NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY 213
               ++ +  V  +A  Y+++  G     ++  A KV++     GS PD+  Y+ LI  +
Sbjct: 285 AVLQEISQERVPIEAFAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIHSH 344

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           C++GN+E+     E M+S G ++N      LL  + K G I E +    +   +GL  D 
Sbjct: 345 CKMGNLEKAWYHIEDMVSHGIEINCHIVGSLLQCLRKLGMISEVIVHFQKFRDLGLHLDG 404

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           V Y++ +   CK   +++A++L NEM +  + P+   +  ++ G C K     A   F+ 
Sbjct: 405 VLYNVAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQ 464

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++ +N   DVV YNI+  GY + G + +   L   ++++ + P+ +T+   I GFC+ G 
Sbjct: 465 MLKANIKPDVVTYNILSSGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGN 524

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           +++A  L + ++  G++   V Y++ +  Y   G       L   +  +     H++ + 
Sbjct: 525 LSEAEVLFNIVEEKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSK 584

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I GLC+  K+QEA  +   M    V P  I+Y+ +I ++C+ +D+R A    + M    
Sbjct: 585 LINGLCRDEKVQEASTVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERG 644

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE------- 566
           L   +A Y IL++G C  G L+ A  L V +    I    VAYT ++  H  E       
Sbjct: 645 LSDVTA-YTILMNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTVLLDGHLKETLQQGWQ 703

Query: 567 GDVHKAMTFFCQ---------MVEKGFEISIRDYT---------------KSFFCMMLSN 602
           G   +  TFF +         M E   E  +  YT               +  F  ML+ 
Sbjct: 704 GIAKERRTFFLRTKHKVLLSSMKEMEIEPDVTCYTVLIYGQCKAEYLEEARGLFDEMLAK 763

Query: 603 GFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           G  PD +    ++  +   G++    +L   MI  G+ PD
Sbjct: 764 GLTPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKGMKPD 803



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 132/584 (22%), Positives = 237/584 (40%), Gaps = 97/584 (16%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM 159
           ++N ++  Y     A+    +FC + + G  P  ++ N L+  +  +      +   + M
Sbjct: 155 AVNCLIKAYTTCHDAQETVDMFCHLCRLGFVPTLWACNFLLKFVSQSSDSHMVVAAYDRM 214

Query: 160 GRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG-- 217
               +  DA + +I+ +     ++   A++V   ++  G   D+  Y+  I G C  G  
Sbjct: 215 KCFQLTLDAQSLNIVTRSLFQANKADEAFRVWVGMIEMGVKLDVQGYSSFIIGLCDCGKY 274

Query: 218 ----NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
               N+     + + +  +   +   AY++++  +CK  +++EA  +L      G  PDL
Sbjct: 275 DLAYNMVRRYAVLQEISQERVPIEAFAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDL 334

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
             YS LI   CK   + KA     +M S  I  N    G++L  L +  MI+E  ++F  
Sbjct: 335 YGYSYLIHSHCKMGNLEKAWYHIEDMVSHGIEINCHIVGSLLQCLRKLGMISEVIVHFQK 394

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
                   D VLYN+ +D                                    +CK G 
Sbjct: 395 FRDLGLHLDGVLYNVAMD-----------------------------------AYCKLGN 419

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + +A +LL+ +   GL P  + YT  +N YC +G  +    + ++M    I P  VTY +
Sbjct: 420 MNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNI 479

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA---FQLLNQMW 510
           +  G  +   + +   LLE M   G+ P+ +TY   I  FC+  +L +A   F ++ +  
Sbjct: 480 LSSGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKG 539

Query: 511 LHNLEP--------------TSATYNI------------------LIDGLCVNGDLKNAD 538
           + N++               T   Y +                  LI+GLC +  ++ A 
Sbjct: 540 IDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEAS 599

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCM 598
            +   + E N+    ++Y+ +I A+C   D+  A  +F  MVE+G    +  YT      
Sbjct: 600 TVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERGLS-DVTAYT------ 652

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +L NG+      C+V        G L    EL   M+  G+ PD
Sbjct: 653 ILMNGY------CKV--------GQLQEACELFVQMVNLGIKPD 682



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 167/371 (45%), Gaps = 56/371 (15%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +I+G C +   ++A    ++       P VV+ N + S Y + G       L   M+ 
Sbjct: 443 TCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILSSGYSRNGLVMKVFDLLEHMMD 502

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF-------- 178
            GL P++ +Y I I G C  G++ EA    N +   G++   + YS +  G+        
Sbjct: 503 QGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDNIDVLYSSMVCGYLHSGWTDH 562

Query: 179 ----------------HLL-----------SQISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
                           HL             ++  A  V   +L K   P +++Y+ LI 
Sbjct: 563 AYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTVCSMMLEKNVVPHVISYSKLIS 622

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
            YCQ  ++         M+ +G   +V AY++L++  CK G++ EA  L  +M  +G+KP
Sbjct: 623 AYCQSRDMRNAHLWFHDMVERGLS-DVTAYTILMNGYCKVGQLQEACELFVQMVNLGIKP 681

Query: 272 DLVTYSILI------------RGLCKQDKV------HKAIQLYNEMCSKRISPNSFAHGA 313
           D+V Y++L+            +G+ K+ +       HK   L + M    I P+   +  
Sbjct: 682 DVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKV--LLSSMKEMEIEPDVTCYTV 739

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++ G C+ E + EAR  FD ++      DV  Y  +I+GY   G I +A  L++++I+K 
Sbjct: 740 LIYGQCKAEYLEEARGLFDEMLAKGLTPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKG 799

Query: 374 ISPSIVTFNSL 384
           + P +++F+ L
Sbjct: 800 MKPDVLSFSVL 810



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 19/241 (7%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S +I+GLC+  ++Q+A         K   P V+S + ++S YC+      A   F  M++
Sbjct: 583 SKLINGLCRDEKVQEASTVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVE 642

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL  D  +Y IL++G C  G ++EA E    M   G++PD + Y++L  G HL   +  
Sbjct: 643 RGL-SDVTAYTILMNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTVLLDG-HLKETLQQ 700

Query: 187 AWKVI------------QKLLIKGS-----DPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
            W+ I             K+L+        +PD+  YTVLI G C+   +EE   L + M
Sbjct: 701 GWQGIAKERRTFFLRTKHKVLLSSMKEMEIEPDVTCYTVLIYGQCKAEYLEEARGLFDEM 760

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           L++G   +V AY+ L++  C  G I +A  L  EM   G+KPD++++S+L +   +  KV
Sbjct: 761 LAKGLTPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKGMKPDVLSFSVLHQRTLRHRKV 820

Query: 290 H 290
           H
Sbjct: 821 H 821



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 90/426 (21%), Positives = 169/426 (39%), Gaps = 61/426 (14%)

Query: 229 MLSQGF--KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI--LIRGLC 284
           +LS  F  K+ V  +  +LS     G   E L L+  +        +++Y++  LI+   
Sbjct: 107 ILSHSFQGKMLVSLFCEILSGTDSGG--PEILALIDHLRKTCATSHVLSYAVNCLIKAYT 164

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ--- 341
                 + + ++  +C     P  +A   +L  + +    +++ M   +     C Q   
Sbjct: 165 TCHDAQETVDMFCHLCRLGFVPTLWACNFLLKFVSQS---SDSHMVVAAYDRMKCFQLTL 221

Query: 342 DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
           D    NI+     +     EA +++  +IE  +   +  ++S I G C  GK        
Sbjct: 222 DAQSLNIVTRSLFQANKADEAFRVWVGMIEMGVKLDVQGYSSFIIGLCDCGK-------- 273

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
                            +  AY    N+ R  A+LQE+  + +      Y +VI GLCK+
Sbjct: 274 -----------------YDLAY----NMVRRYAVLQEISQERVPIEAFAYNMVIDGLCKE 312

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
            KL+EA ++LE     G TPD   Y+ +I S CK  +L KA+  +  M  H +E      
Sbjct: 313 MKLEEAEKVLEIKTRHGSTPDLYGYSYLIHSHCKMGNLEKAWYHIEDMVSHGIEINCHIV 372

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
             L+  L   G +          ++  + L  V Y   + A+C  G++++A+    +M  
Sbjct: 373 GSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYNVAMDAYCKLGNMNEAVKLLNEM-- 430

Query: 582 KGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                             ++ G  PD+     ++  +   G+  + +++   M+K+ + P
Sbjct: 431 ------------------MAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKP 472

Query: 642 DKFLIN 647
           D    N
Sbjct: 473 DVVTYN 478


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 242/483 (50%), Gaps = 15/483 (3%)

Query: 89  TAGKEFG-PSVVSLNAIMSRYCKLGFA--------EVAKGLFCLMLKYGLHPDAFSYNIL 139
           + G EF  PS+V       ++C + F         + +  +F    K G   D  S    
Sbjct: 106 SIGGEFNEPSIVE------KFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEF 159

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           +  L  +G+ME  +EF   M   G+E    +++ +  G     ++  A  ++ +L+ KG 
Sbjct: 160 LLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGF 219

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            P ++TY  L+ GY +I +V    ++  +M       NV  Y++L+    +S +I+EA  
Sbjct: 220 KPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEK 279

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           L  EM   G++PD+  Y+ +I   CK   + +A  L++EM  +R+ PN++ +GA++ G C
Sbjct: 280 LFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGAC 339

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           +   +  A M  + +       + V++N ++DGY K G I EA++L   + +K       
Sbjct: 340 KAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAF 399

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T N +  GFC++ +  +A+RLL T++  G+ P+ V+++  ++ YC+E N      L + M
Sbjct: 400 TCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVM 459

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
           E K   P+ VTY   I+  CK+ K++EA +L+ +M   G+ PD  TY ++I       ++
Sbjct: 460 EKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNV 519

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
            +A +L N+M    L     TY ++I GL  +G    A  L   + +  I      Y+++
Sbjct: 520 DRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSL 579

Query: 560 IKA 562
           I +
Sbjct: 580 IAS 582



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 218/428 (50%)

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
            L +   ++  + FL++         V S  A++   CK G    AK L   ++  G  P
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 221

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
              +YN L++G      +    E  + M ++ V+ +  TY++L + +   S+I  A K+ 
Sbjct: 222 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 281

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            ++L KG +PD+  YT +I   C+ GN++    L + M  +    N   Y  L++  CK+
Sbjct: 282 DEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA 341

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G +  A  ++ +M++ G+  + V ++ L+ G CK+  + +A++L N M  K    ++F  
Sbjct: 342 GEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTC 401

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             I  G C      EA+    ++       +VV ++I+ID Y K  N  EA +L++ + +
Sbjct: 402 NIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEK 461

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K  +PS+VT+N+ I  +CK GK+ +A +L++ ++  GL P   TYT+ ++     GN+ R
Sbjct: 462 KGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDR 521

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            L L  EM    +    VTYTV+I GL K  +  EA +L ++M   G+ PD   Y+++I 
Sbjct: 522 ALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIA 581

Query: 492 SFCKCKDL 499
           S  K   L
Sbjct: 582 SLHKVGPL 589



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 203/426 (47%), Gaps = 20/426 (4%)

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           GN+E  ++    M+  G ++ V +++ ++  +CK G +  A  L+ E+   G KP ++TY
Sbjct: 167 GNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITY 226

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + L+ G  +   V    ++ + M    +  N   +  ++        I EA   FD ++ 
Sbjct: 227 NTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLK 286

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                DV +Y  +I+   K GN+  A  L+ ++ E+R+ P+  T+ +LI G CK G++  
Sbjct: 287 KGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKA 346

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  +++ ++  G++ + V + T M+ YC++G I   L L   M+ K       T  ++  
Sbjct: 347 AEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIAS 406

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           G C+  + +EA +LL  M   GV P+ ++++ +I  +CK ++  +A +L   M      P
Sbjct: 407 GFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 466

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           +  TYN  I+  C  G ++ A  L+  +QE  +      YT++I    A G+V +A+  F
Sbjct: 467 SVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELF 526

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
            +M + G   ++  YT                    V++    + G     F+L   M K
Sbjct: 527 NEMPQLGLNRNVVTYT--------------------VIISGLSKDGRADEAFKLYDEMNK 566

Query: 637 SGLLPD 642
            G++PD
Sbjct: 567 EGIVPD 572



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 189/394 (47%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + V+DGLC++  +  A   + E   K F PSV++ N +++ Y ++        +  LM K
Sbjct: 192 TAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEK 251

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             +  +  +Y +LI     +  +EEA +  ++M + G+EPD   Y+ +         +  
Sbjct: 252 NVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKR 311

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A+ +  ++  +   P+  TY  LI G C+ G ++    +   M S+G  +N + ++ L+ 
Sbjct: 312 AFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMD 371

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             CK G IDEAL L   M+  G + D  T +I+  G C+ ++  +A +L   M  + ++P
Sbjct: 372 GYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAP 431

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N  +   ++   C+++   EAR  F  +        VV YN  I+ Y K G + EA +L 
Sbjct: 432 NVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLI 491

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++ E+ + P   T+ SLI G   +G V  A  L + +   GL  + VTYT  ++   ++
Sbjct: 492 NEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKD 551

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           G       L  EM  + I P    Y+ +I  L K
Sbjct: 552 GRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 585



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 193/397 (48%), Gaps = 38/397 (9%)

Query: 27  LKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAI 83
            K S+ TYN+LL     ++    + ++   ++ +    NV T +++I+   + S++++A 
Sbjct: 219 FKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAE 278

Query: 84  LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGL 143
               E   K   P V    +I++  CK G  + A  LF  M +  L P+A++Y  LI+G 
Sbjct: 279 KLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGA 338

Query: 144 CIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
           C AG M+ A    NDM   GV                                   D + 
Sbjct: 339 CKAGEMKAAEMMVNDMQSKGV-----------------------------------DVNR 363

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           V +  L+ GYC+ G ++E L+L+ +M  +GF+++    +++ S  C+S R +EA  LL  
Sbjct: 364 VIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLT 423

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           ME  G+ P++V++SILI   CK+    +A +L+  M  K  +P+   + A +   C+K  
Sbjct: 424 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 483

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           + EA    + +     + D   Y  +IDG    GN+  A++L+ ++ +  ++ ++VT+  
Sbjct: 484 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 543

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +I G  K+G+  +A +L D +   G+ P    Y++ +
Sbjct: 544 IISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 580



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 161/321 (50%), Gaps = 3/321 (0%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL-YNLRHTDI--MWDLYDDIKVS 57
           ML   YSR+  + +A  +  +M +  ++  +  Y S++ +N +  ++   + L+D++   
Sbjct: 263 MLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTER 322

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               N YT   +I+G C+   ++ A + + +   K    + V  N +M  YCK G  + A
Sbjct: 323 RLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEA 382

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L  +M + G   DAF+ NI+  G C +   EEA      M   GV P+ +++SIL   
Sbjct: 383 LRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDI 442

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +      + A ++ + +  KG  P +VTY   I  YC+ G +EE  KL   M  +G   +
Sbjct: 443 YCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPD 502

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              Y+ L+     SG +D AL L  EM  +GL  ++VTY+++I GL K  +  +A +LY+
Sbjct: 503 TYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYD 562

Query: 298 EMCSKRISPNSFAHGAILLGL 318
           EM  + I P+   + +++  L
Sbjct: 563 EMNKEGIVPDDGIYSSLIASL 583



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 172/352 (48%), Gaps = 20/352 (5%)

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           ++   +M    I     +  A++ GLC+K  +  A+   D L+       V+ YN +++G
Sbjct: 173 VEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNG 232

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           Y+++ ++G   ++   + +  +  ++ T+  LI  + ++ K+ +A +L D +   G+EP 
Sbjct: 233 YIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPD 292

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
              YT+ +N  C+ GN++R   L  EM  + + P   TY  +I G CK  +++ A  ++ 
Sbjct: 293 VYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVN 352

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           DM   GV  +++ +NT++  +CK   + +A +L N M     E  + T NI+  G C + 
Sbjct: 353 DMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSN 412

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             + A  LL++++E  ++   V+++ +I  +C E +  +A   F  M +KG   S+  Y 
Sbjct: 413 RREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTY- 471

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                    N F          +  + + G +   ++L   M + GL+PD +
Sbjct: 472 ---------NAF----------IERYCKKGKMEEAYKLINEMQERGLMPDTY 504



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 104/209 (49%), Gaps = 2/209 (0%)

Query: 376 PSIV-TFNSLIYGFCKNGKVADAR-RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           PSIV  F  +++    + ++ D+   + D  +  G E    +   F+ A    GN++  +
Sbjct: 114 PSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCV 173

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
             L++M    I     ++T V+ GLCK+ ++  A  L++++   G  P  ITYNT++  +
Sbjct: 174 EFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGY 233

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
            + KD+    ++L+ M  + ++    TY +LI+    +  ++ A+ L   + +  I    
Sbjct: 234 IEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDV 293

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
             YT+II  +C  G++ +A   F +M E+
Sbjct: 294 YIYTSIINWNCKFGNMKRAFVLFDEMTER 322


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 193/379 (50%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P  F ++ ++  L         +        +GV P+  T +IL   F  L+ I+ A+ V
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              +L +G  PD +T   LI G C  G ++  L   + +++QGF+L+ ++Y  L++ +CK
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           +G       LL ++E   +KPD+V Y+ +I  LCK  +V  A  LY+EM  K ISPN F 
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C    + EA    + + + N   DV  +NI+ID   K G I EA+ L+ ++ 
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK 330

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            K + P+IVT+ SLI G CKN  +  A  L   +K  G++P   +YT  ++A C+ G ++
Sbjct: 331 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 390

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
                 Q +  K       TY V+I GLCK     + + L   M   G  PD IT+ TII
Sbjct: 391 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTII 450

Query: 491 RSFCKCKDLRKAFQLLNQM 509
            +  +  +  KA + L +M
Sbjct: 451 CALFEKDENDKAEKFLREM 469



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 186/394 (47%)

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           ++ + +   P   +    ++  L +       I   ++       P++ +LN +++ +C 
Sbjct: 81  FNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCH 140

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           L     A  +F  +LK G HPDA + N LI GLC  G ++ AL F + +   G + D ++
Sbjct: 141 LAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVS 200

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y  L  G     +     ++++KL      PD+V YT +I   C+   V +   L   M+
Sbjct: 201 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMI 260

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +G   NV  Y+ L+   C  G + EA  LL EM+   + PD+ T++ILI  L K+ K+ 
Sbjct: 261 VKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKID 320

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +AI L+ EM  K + PN   + +++ GLC+   +  A      +       DV  Y I++
Sbjct: 321 EAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 380

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           D   K G +  A Q ++ L+ K    ++ T+N +I G CK G   D   L   ++  G  
Sbjct: 381 DALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCM 440

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           P A+T+ T + A  E+    +    L+EM  + +
Sbjct: 441 PDAITFKTIICALFEKDENDKAEKFLREMIARGL 474



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 174/366 (47%), Gaps = 15/366 (4%)

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A+  +N M   R  P +F    IL  L + +        F     +    ++   NI+I+
Sbjct: 77  AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
            +  L +I  A  ++  ++++   P  +T N+LI G C  G++  A    D +   G + 
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQL 196

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
             V+Y T +N  C+ G  + +  LL+++E  ++ P  V YT +I  LCK  ++ +A  L 
Sbjct: 197 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLY 256

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            +M V G++P+  TYNT+I  FC   +L++AF LLN+M L N+ P   T+NILID L   
Sbjct: 257 SEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKE 316

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           G +  A  L   ++  N+    V YT++I   C    + +A+    +M E+G +  +  Y
Sbjct: 317 GKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSY 376

Query: 592 T---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           T               K FF  +L  G+  +     VM+    + G  G V +L + M  
Sbjct: 377 TILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEG 436

Query: 637 SGLLPD 642
            G +PD
Sbjct: 437 KGCMPD 442



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 189/377 (50%), Gaps = 5/377 (1%)

Query: 35  NSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEF 94
           +SL+ N +H   +  L+   + +    N+ T +I+I+  C  + +  A         + +
Sbjct: 101 SSLVKN-KHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGY 159

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFC--LMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
            P  ++LN ++   C  G  E+ + L+    ++  G   D  SY  LI+GLC AG  +  
Sbjct: 160 HPDAITLNTLIKGLCFCG--EIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAV 217

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
                 +  H V+PD + Y+ +        ++  A  +  ++++KG  P++ TY  LI G
Sbjct: 218 ARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYG 277

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           +C +GN++E   L   M  +    +V  +++L+ ++ K G+IDEA+ L  EM+   + P+
Sbjct: 278 FCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPN 337

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
           +VTY+ LI GLCK   + +AI L  +M  + I P+ +++  +L  LC+   +  A+ +F 
Sbjct: 338 IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQ 397

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            L++     +V  YN+MI+G  K G  G+ + L  ++  K   P  +TF ++I    +  
Sbjct: 398 HLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKD 457

Query: 393 KVADARRLLDTIKLHGL 409
           +   A + L  +   GL
Sbjct: 458 ENDKAEKFLREMIARGL 474



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 162/343 (47%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           +  +LSS+ K+      + L  + ++ G+ P+L T +ILI   C    +  A  ++  + 
Sbjct: 96  FDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANIL 155

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            +   P++     ++ GLC    I  A  + D ++      D V Y  +I+G  K G   
Sbjct: 156 KRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETK 215

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
              +L R+L    + P +V + ++I+  CKN +V DA  L   + + G+ P+  TY T +
Sbjct: 216 AVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLI 275

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
             +C  GN++   +LL EM+ K I P   T+ ++I  L K+ K+ EA+ L E+M    + 
Sbjct: 276 YGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMF 335

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ +TY ++I   CK   L +A  L  +M    ++P   +Y IL+D LC  G L+NA   
Sbjct: 336 PNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQF 395

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
              L      L    Y  +I   C  G     M    +M  KG
Sbjct: 396 FQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKG 438



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 178/357 (49%), Gaps = 4/357 (1%)

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           S L K  H L+ IS    + ++    G  P++ T  +LI  +C + ++     +   +L 
Sbjct: 101 SSLVKNKHYLTVIS----LFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILK 156

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           +G+  + I  + L+  +C  G I  AL    ++ A G + D V+Y  LI GLCK  +   
Sbjct: 157 RGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKA 216

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
             +L  ++    + P+   +  I+  LC+ + + +A   +  +I+     +V  YN +I 
Sbjct: 217 VARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIY 276

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G+  +GN+ EA  L  ++  K I+P + TFN LI    K GK+ +A  L + +K   + P
Sbjct: 277 GFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFP 336

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           + VTYT+ ++  C+  +++R +AL ++M+ + I P   +YT+++  LCK  +L+ A Q  
Sbjct: 337 NIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFF 396

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           + + V G   +  TYN +I   CK         L ++M      P + T+  +I  L
Sbjct: 397 QHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICAL 453



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 122/268 (45%), Gaps = 44/268 (16%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY------NLRHTDIMWDLYDDIKVSETPR 61
           +   V DA  + ++M    +  ++ TYN+L+Y      NL+     + L +++K+     
Sbjct: 245 KNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEA---FSLLNEMKLKNINP 301

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +VYT +I+ID L ++ ++ +AI   +E   K   P++V+  +++   CK    E A  L 
Sbjct: 302 DVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALC 361

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+ PD +SY IL+  LC  G +E A +F                          
Sbjct: 362 KKMKEQGIQPDVYSYTILLDALCKGGRLENAKQF-------------------------- 395

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
                     Q LL+KG   ++ TY V+I G C+ G   + + L+  M  +G   + I +
Sbjct: 396 ---------FQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITF 446

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGL 269
             ++ ++ +    D+A   L EM A GL
Sbjct: 447 KTIICALFEKDENDKAEKFLREMIARGL 474



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 28/256 (10%)

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           VA   R+L    L    P    +   +++  +  +   +++L ++ ++  + P   T  +
Sbjct: 78  VASFNRML----LMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNI 133

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           +I   C    +  A  +  ++   G  PD IT NT+I+  C C ++++A    +++    
Sbjct: 134 LINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQG 193

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
            +    +Y  LI+GLC  G+ K    LL  L+ H++    V YTTII   C    V  A 
Sbjct: 194 FQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDAC 253

Query: 574 TFFCQMVEKGFEISIRDYTKSF--FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
             + +M+ KG   ++  Y      FC+M                      G+L   F L 
Sbjct: 254 DLYSEMIVKGISPNVFTYNTLIYGFCIM----------------------GNLKEAFSLL 291

Query: 632 AVMIKSGLLPDKFLIN 647
             M    + PD +  N
Sbjct: 292 NEMKLKNINPDVYTFN 307


>gi|414878622|tpg|DAA55753.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
          Length = 573

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 259/555 (46%), Gaps = 27/555 (4%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAI------LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
           +V+  S  I GLC   +   A         LQE + +      ++ N ++   CK    +
Sbjct: 9   DVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDGLCKEMKLK 68

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            A+ +  +  ++G  PD +SY+ LIH  C  G++E+A     DM  HG+E +    + L 
Sbjct: 69  EAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEINCYIVAYLL 128

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
           +    L  +S      QK    G   D V Y + +  YC++GN+ E +KL   M++    
Sbjct: 129 QCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLNEMMAGSLV 188

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            + I Y+ L++  C  G  + A  +  EM    +KPD+VTY+IL  G  +   V K   +
Sbjct: 189 PDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNGLVMKVFDI 248

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV-VLYNIMIDGYV 354
              M  + + PNS  +G  + G C    ++EA + F+ ++    I ++ VLY  M+ GY+
Sbjct: 249 LEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFN-IVEERGIDNINVLYGSMVCGYL 307

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
             G    A  L+ ++ ++      ++ + LI G C++ KV +A  +   +    + P  +
Sbjct: 308 HSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEKNVVPDVI 367

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           +Y+  ++AYC+  ++        +M  + +    + YTV++ G CK  +LQEA +L   M
Sbjct: 368 SYSKLISAYCQTRDMHNARLWFHDMVERGLSDV-IVYTVLMNGYCKVGRLQEACELFVQM 426

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQ-----------------LLNQMWLHNLEPT 517
             +G+ PD + Y  ++    K + L++ +Q                 LLN M    +EP 
Sbjct: 427 INLGIKPDVVAYTVLLDGHLK-ETLQQGWQGIAKERRTFFLRTKHKVLLNSMKDMEIEPD 485

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
              Y +LIDG C    L+ A  L   +    +      YT +I  +C++G++ KA   F 
Sbjct: 486 VTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGYCSQGEIAKAEDLFQ 545

Query: 578 QMVEKGFEISIRDYT 592
           +M+ KG +  +  ++
Sbjct: 546 EMIAKGMKPDVLSFS 560



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/563 (24%), Positives = 253/563 (44%), Gaps = 96/563 (17%)

Query: 22  MKELDLKVSIQTYNSLLYNL---RHTDIMWDLY------DDIKVSETPRNVYTNSIVIDG 72
           M E+ +K+ +  ++S +  L      D+ +++        +I     P      ++VIDG
Sbjct: 1   MIEMGVKLDVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDG 60

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE---------VAKG--LF 121
           LC++ +L++A   L+        P + S + ++  +CK+G  E         V+ G  + 
Sbjct: 61  LCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEIN 120

Query: 122 CLMLKY------------------------GLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           C ++ Y                        G+H D   YNI +   C  G+M EA++  N
Sbjct: 121 CYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLN 180

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           +M    + PD I Y+ L  G+ L  +   AW+V +++L     PD+VTY +L  GY + G
Sbjct: 181 EMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNG 240

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP------ 271
            V +   + E M+ QG + N + Y + ++  C+ G + EA  L   +E  G+        
Sbjct: 241 LVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYG 300

Query: 272 -----------------------------DLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
                                        D ++ S LI GLC+ +KV +A  +   M  K
Sbjct: 301 SMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEK 360

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+  ++  ++   C+   +  AR++F  ++    + DV++Y ++++GY K+G + EA
Sbjct: 361 NVVPDVISYSKLISAYCQTRDMHNARLWFHDMV-ERGLSDVIVYTVLMNGYCKVGRLQEA 419

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNG------KVADARR----------LLDTIKL 406
            +L+ Q+I   I P +V +  L+ G  K         +A  RR          LL+++K 
Sbjct: 420 CELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLNSMKD 479

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
             +EP    YT  ++  C+   ++    L  EM  K + P   TYT +I G C Q ++ +
Sbjct: 480 MEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGYCSQGEIAK 539

Query: 467 AVQLLEDMYVIGVTPDQITYNTI 489
           A  L ++M   G+ PD ++++ +
Sbjct: 540 AEDLFQEMIAKGMKPDVLSFSVL 562



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/560 (24%), Positives = 257/560 (45%), Gaps = 46/560 (8%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT------NDMGRHGVEPDAITYSILAKG 177
           M++ G+  D   ++  I GLC  G  + A           ++ +  V  +A+ Y+++  G
Sbjct: 1   MIEMGVKLDVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDG 60

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A KV++     GS PD+ +Y+ LI  +C++GN+E+     E M+S G ++N
Sbjct: 61  LCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEIN 120

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
               + LL  + K G + E +    +   +G+  D V Y+I +   CK   +++A++L N
Sbjct: 121 CYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLN 180

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM +  + P+   +  ++ G C K     A   F+ ++ +N   DVV YNI+  GY + G
Sbjct: 181 EMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNG 240

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + +   +   ++++ + P+ +T+   I GFC+ G +++A  L + ++  G++   V Y 
Sbjct: 241 LVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYG 300

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           + +  Y   G       L   +  +      ++ + +I GLC+  K+ EA  + + M   
Sbjct: 301 SMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEK 360

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT----YNILIDGLCVNGD 533
            V PD I+Y+ +I ++C+ +D+  A     ++W H++     +    Y +L++G C  G 
Sbjct: 361 NVVPDVISYSKLISAYCQTRDMHNA-----RLWFHDMVERGLSDVIVYTVLMNGYCKVGR 415

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE-------GDVHKAMTFFCQMVEKGFEI 586
           L+ A  L V +    I    VAYT ++  H  E       G   +  TFF +   K    
Sbjct: 416 LQEACELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLN 475

Query: 587 SIRD---------YT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           S++D         YT               +  F  ML+ G  PD      ++  +   G
Sbjct: 476 SMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGYCSQG 535

Query: 623 DLGSVFELAAVMIKSGLLPD 642
           ++    +L   MI  G+ PD
Sbjct: 536 EIAKAEDLFQEMIAKGMKPD 555



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 19/241 (7%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S +I+GLC+  ++ +A    +    K   P V+S + ++S YC+      A+  F  M++
Sbjct: 335 SKLINGLCRDEKVGEASTVCKMMLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVE 394

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL  D   Y +L++G C  G ++EA E    M   G++PD + Y++L  G HL   +  
Sbjct: 395 RGL-SDVIVYTVLMNGYCKVGRLQEACELFVQMINLGIKPDVVAYTVLLDG-HLKETLQQ 452

Query: 187 AWKVIQK-------------LLIKGSD----PDIVTYTVLICGYCQIGNVEEGLKLREVM 229
            W+ I K             LL    D    PD+  YTVLI G C+   +EE   L + M
Sbjct: 453 GWQGIAKERRTFFLRTKHKVLLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEM 512

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           L++G   +V  Y+ L++  C  G I +A  L  EM A G+KPD++++S+L +   + +K 
Sbjct: 513 LAKGLIPDVHTYTALINGYCSQGEIAKAEDLFQEMIAKGMKPDVLSFSVLHKRTLRHEKA 572

Query: 290 H 290
           H
Sbjct: 573 H 573



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 21/191 (10%)

Query: 474 MYVIGVTPDQITYNTIIRSFCKCK------DLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           M  +GV  D   +++ I   C C       ++ + + +L ++    +   +  YN++IDG
Sbjct: 1   MIEMGVKLDVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDG 60

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC    LK A+ +L     H  +    +Y+ +I +HC  G++ KA      MV  G EI+
Sbjct: 61  LCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEIN 120

Query: 588 IRDYTKSFFCM----MLSN-----------GFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
                    C+    M+S            G   D  +  + + A+ + G++    +L  
Sbjct: 121 CYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLN 180

Query: 633 VMIKSGLLPDK 643
            M+   L+PDK
Sbjct: 181 EMMAGSLVPDK 191


>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Brachypodium distachyon]
          Length = 864

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 159/567 (28%), Positives = 251/567 (44%), Gaps = 59/567 (10%)

Query: 33  TYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGK 92
           T N+LL  L     M DL   +  +   RN +++ I+  G C+  R  DA+  L   A  
Sbjct: 145 TRNALLEALSAAGRM-DLARRVFDAMPARNEFSSGILARGYCRAGRSADALAVLD--AMP 201

Query: 93  EFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA 152
           E   ++V  N +++ +C+ G  + A+ L   M   GL P+  ++N  I  LC AG + EA
Sbjct: 202 EM--NLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEA 259

Query: 153 LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICG 212
               NDM                           AW+  Q L      PD VT+ V++ G
Sbjct: 260 YRIFNDMQE-------------------------AWE--QGL----PRPDQVTFDVMLSG 288

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           +C  G V+E   L ++M   GF   V +Y+  LS + K+GR+ EA  LL EM   G++P+
Sbjct: 289 FCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPN 348

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
             TY+I++ GLCK+ K     ++ + + S  ++P+   + ++L   C K   T A    D
Sbjct: 349 SYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILD 408

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +    C  ++  YN+++   +K G   E  +L  ++ EK  S    + N +I G C+N 
Sbjct: 409 EMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNS 468

Query: 393 KVADARRLLDTIKLHGLE-----------------------PSAVTYTTFMNAYCEEGNI 429
           K+  A  ++D +   G                         P  +TY+T MNA C+EG  
Sbjct: 469 KLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRF 528

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
                 L EM  K I P  V Y   I G C   K   A+++L DM      P   +YN +
Sbjct: 529 DEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLL 588

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I  F + +   +  +L+++M    +     TYN LI   C  G +  A  LL  + ++ I
Sbjct: 589 IWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEI 648

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFF 576
                ++  +IKA C   D   A   F
Sbjct: 649 VPNVTSFGLLIKAFCKTADFSAAQRVF 675



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 233/518 (44%), Gaps = 49/518 (9%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFT----NDMGRHGVEPDAITYSILAKGFHLLSQ 183
           G  P    YN L+    +A   E+ L+       D+   G  PD  T + L +      +
Sbjct: 103 GAAPPTPVYNRLL----LAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGR 158

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A +V   +  +       +  +L  GYC+ G   + L + + M     ++N++  + 
Sbjct: 159 MDLARRVFDAMPARNE----FSSGILARGYCRAGRSADALAVLDAMP----EMNLVVCNT 210

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +++  C+ GR+DEA  L+  M A GL P++VT++  I  LCK  +V +A +++N+M    
Sbjct: 211 VVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAW 270

Query: 304 ----ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
                 P+      +L G C+  M+ EA +  D +     ++ V  YN  + G VK G +
Sbjct: 271 EQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRV 330

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
           GEA +L  ++  + + P+  T+N ++ G CK GK  D RR+ D ++   + P  VTYT+ 
Sbjct: 331 GEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSL 390

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++AYC +GN      +L EM  K   P   TY V+++ L K  +  E  +LLE M   G 
Sbjct: 391 LHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGY 450

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMW------LHNLE-----------------P 516
           + D  + N II   C+   L  A  +++ MW      L  L                  P
Sbjct: 451 SLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLP 510

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              TY+ L++ LC  G    A   LV +   +IS   V Y T I  +C  G    A+   
Sbjct: 511 DRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVL 570

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
             M ++    S R Y       +L  GF   Q+  E++
Sbjct: 571 RDMEKRSCNPSTRSYN------LLIWGFQEKQKSDEIL 602



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 162/622 (26%), Positives = 273/622 (43%), Gaps = 57/622 (9%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           +LA  Y R G   DA+ V+  M E++L V            R  D    L D ++     
Sbjct: 179 ILARGYCRAGRSADALAVLDAMPEMNLVVCNTVVAGFCREGR-VDEAERLVDRMRAQGLA 237

Query: 61  RNVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFG---PSVVSLNAIMSRYCKLGFAEV 116
            NV T +  I  LC+  R+ +A  +F       E G   P  V+ + ++S +C  G  + 
Sbjct: 238 PNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDE 297

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  L  +M   G      SYN  + GL   G + EA E  ++M   GV+P++ TY+I+  
Sbjct: 298 ATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVD 357

Query: 177 GFHLLSQISGAWKV--IQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           G   L +   A+ V  ++  +  G   PD+VTYT L+  YC  GN     ++ + M  +G
Sbjct: 358 G---LCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKG 414

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              N+  Y+VLL S+ K+GR  E   LL  M   G   D  + +I+I GLC+  K+  A+
Sbjct: 415 CAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAM 474

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            + + M         +  G + L       ++   +  DS I  +C+ D + Y+ +++  
Sbjct: 475 DIVDGM---------WNEGRLALRRLGNSFVS---LVSDSSISKSCLPDRITYSTLMNAL 522

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K G   EA +   ++I K ISP  V +++ I+G+C +GK + A ++L  ++     PS 
Sbjct: 523 CKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPST 582

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            +Y   +  + E+     +L L+ EM+ K I    +TY  +IK  C +  + +A+ LL++
Sbjct: 583 RSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDE 642

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN-----------------------QMW 510
           M    + P+  ++  +I++FCK  D   A ++ +                         W
Sbjct: 643 MLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVALSTCGQKEVLYCLMCTELSTYARW 702

Query: 511 LH-----------NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
           +             +   S  Y  +I GLC   +  +A  LL        S     +  +
Sbjct: 703 IEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKLFIAKGYSFDPATFMPV 762

Query: 560 IKAHCAEGDVHKAMTFFCQMVE 581
           I A    G  H A     +M+E
Sbjct: 763 IDALSESGKKHDADMLSEKMME 784



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 86/236 (36%), Gaps = 26/236 (11%)

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           L G  P    Y   + A   E  +  + AL +++      P   T   +++ L    ++ 
Sbjct: 101 LGGAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMD 160

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
            A ++ + M       ++ +   + R +C+      A  +L+ M   NL       N ++
Sbjct: 161 LARRVFDAM----PARNEFSSGILARGYCRAGRSADALAVLDAMPEMNL----VVCNTVV 212

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
            G C  G +  A+ L+  ++   ++   V +   I A C  G V +A   F  M E    
Sbjct: 213 AGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEA--- 269

Query: 586 ISIRDYTKSFFCMMLSNGFP-PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLL 640
                            G P PDQ   +VML  F   G +     L  +M   G L
Sbjct: 270 --------------WEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFL 311


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 242/483 (50%), Gaps = 15/483 (3%)

Query: 89  TAGKEFG-PSVVSLNAIMSRYCKLGFA--------EVAKGLFCLMLKYGLHPDAFSYNIL 139
           + G EF  PS+V       ++C + F         + +  +F    K G   D  S    
Sbjct: 110 SIGGEFNEPSIVE------KFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEF 163

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           +  L  +G+ME  +EF   M   G+E    +++ +  G     ++  A  ++ +L+ KG 
Sbjct: 164 LLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGF 223

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            P ++TY  L+ GY +I +V    ++  +M       NV  Y++L+    +S +I+EA  
Sbjct: 224 KPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEK 283

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           L  EM   G++PD+  Y+ +I   CK   + +A  L++EM  +R+ PN++ +GA++ G C
Sbjct: 284 LFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGAC 343

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           +   +  A M  + +       + V++N ++DGY K G I EA++L   + +K       
Sbjct: 344 KAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAF 403

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T N +  GFC++ +  +A+RLL T++  G+ P+ V+++  ++ YC+E N      L + M
Sbjct: 404 TCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVM 463

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
           E K   P+ VTY   I+  CK+ K++EA +L+ +M   G+ PD  TY ++I       ++
Sbjct: 464 EKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNV 523

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
            +A +L N+M    L     TY ++I GL  +G    A  L   + +  I      Y+++
Sbjct: 524 DRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSL 583

Query: 560 IKA 562
           I +
Sbjct: 584 IAS 586



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 218/428 (50%)

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP 131
            L +   ++  + FL++         V S  A++   CK G    AK L   ++  G  P
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 225

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
              +YN L++G      +    E  + M ++ V+ +  TY++L + +   S+I  A K+ 
Sbjct: 226 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 285

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
            ++L KG +PD+  YT +I   C+ GN++    L + M  +    N   Y  L++  CK+
Sbjct: 286 DEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA 345

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G +  A  ++ +M++ G+  + V ++ L+ G CK+  + +A++L N M  K    ++F  
Sbjct: 346 GEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTC 405

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             I  G C      EA+    ++       +VV ++I+ID Y K  N  EA +L++ + +
Sbjct: 406 NIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEK 465

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           K  +PS+VT+N+ I  +CK GK+ +A +L++ ++  GL P   TYT+ ++     GN+ R
Sbjct: 466 KGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDR 525

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            L L  EM    +    VTYTV+I GL K  +  EA +L ++M   G+ PD   Y+++I 
Sbjct: 526 ALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIA 585

Query: 492 SFCKCKDL 499
           S  K   L
Sbjct: 586 SLHKVGPL 593



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 203/426 (47%), Gaps = 20/426 (4%)

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           GN+E  ++    M+  G ++ V +++ ++  +CK G +  A  L+ E+   G KP ++TY
Sbjct: 171 GNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITY 230

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + L+ G  +   V    ++ + M    +  N   +  ++        I EA   FD ++ 
Sbjct: 231 NTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLK 290

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                DV +Y  +I+   K GN+  A  L+ ++ E+R+ P+  T+ +LI G CK G++  
Sbjct: 291 KGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKA 350

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  +++ ++  G++ + V + T M+ YC++G I   L L   M+ K       T  ++  
Sbjct: 351 AEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIAS 410

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           G C+  + +EA +LL  M   GV P+ ++++ +I  +CK ++  +A +L   M      P
Sbjct: 411 GFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 470

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
           +  TYN  I+  C  G ++ A  L+  +QE  +      YT++I    A G+V +A+  F
Sbjct: 471 SVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELF 530

Query: 577 CQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
            +M + G   ++  YT                    V++    + G     F+L   M K
Sbjct: 531 NEMPQLGLNRNVVTYT--------------------VIISGLSKDGRADEAFKLYDEMNK 570

Query: 637 SGLLPD 642
            G++PD
Sbjct: 571 EGIVPD 576



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 189/394 (47%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + V+DGLC++  +  A   + E   K F PSV++ N +++ Y ++        +  LM K
Sbjct: 196 TAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEK 255

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             +  +  +Y +LI     +  +EEA +  ++M + G+EPD   Y+ +         +  
Sbjct: 256 NVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKR 315

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A+ +  ++  +   P+  TY  LI G C+ G ++    +   M S+G  +N + ++ L+ 
Sbjct: 316 AFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMD 375

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             CK G IDEAL L   M+  G + D  T +I+  G C+ ++  +A +L   M  + ++P
Sbjct: 376 GYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAP 435

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N  +   ++   C+++   EAR  F  +        VV YN  I+ Y K G + EA +L 
Sbjct: 436 NVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLI 495

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            ++ E+ + P   T+ SLI G   +G V  A  L + +   GL  + VTYT  ++   ++
Sbjct: 496 NEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKD 555

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           G       L  EM  + I P    Y+ +I  L K
Sbjct: 556 GRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 589



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 193/397 (48%), Gaps = 38/397 (9%)

Query: 27  LKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAI 83
            K S+ TYN+LL     ++    + ++   ++ +    NV T +++I+   + S++++A 
Sbjct: 223 FKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAE 282

Query: 84  LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGL 143
               E   K   P V    +I++  CK G  + A  LF  M +  L P+A++Y  LI+G 
Sbjct: 283 KLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGA 342

Query: 144 CIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
           C AG M+ A    NDM   GV                                   D + 
Sbjct: 343 CKAGEMKAAEMMVNDMQSKGV-----------------------------------DVNR 367

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           V +  L+ GYC+ G ++E L+L+ +M  +GF+++    +++ S  C+S R +EA  LL  
Sbjct: 368 VIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLT 427

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           ME  G+ P++V++SILI   CK+    +A +L+  M  K  +P+   + A +   C+K  
Sbjct: 428 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 487

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           + EA    + +     + D   Y  +IDG    GN+  A++L+ ++ +  ++ ++VT+  
Sbjct: 488 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 547

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +I G  K+G+  +A +L D +   G+ P    Y++ +
Sbjct: 548 IISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 584



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 161/321 (50%), Gaps = 3/321 (0%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL-YNLRHTDI--MWDLYDDIKVS 57
           ML   YSR+  + +A  +  +M +  ++  +  Y S++ +N +  ++   + L+D++   
Sbjct: 267 MLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTER 326

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               N YT   +I+G C+   ++ A + + +   K    + V  N +M  YCK G  + A
Sbjct: 327 RLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEA 386

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             L  +M + G   DAF+ NI+  G C +   EEA      M   GV P+ +++SIL   
Sbjct: 387 LRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDI 446

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +      + A ++ + +  KG  P +VTY   I  YC+ G +EE  KL   M  +G   +
Sbjct: 447 YCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPD 506

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              Y+ L+     SG +D AL L  EM  +GL  ++VTY+++I GL K  +  +A +LY+
Sbjct: 507 TYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYD 566

Query: 298 EMCSKRISPNSFAHGAILLGL 318
           EM  + I P+   + +++  L
Sbjct: 567 EMNKEGIVPDDGIYSSLIASL 587



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 172/352 (48%), Gaps = 20/352 (5%)

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           ++   +M    I     +  A++ GLC+K  +  A+   D L+       V+ YN +++G
Sbjct: 177 VEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNG 236

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           Y+++ ++G   ++   + +  +  ++ T+  LI  + ++ K+ +A +L D +   G+EP 
Sbjct: 237 YIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPD 296

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
              YT+ +N  C+ GN++R   L  EM  + + P   TY  +I G CK  +++ A  ++ 
Sbjct: 297 VYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVN 356

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           DM   GV  +++ +NT++  +CK   + +A +L N M     E  + T NI+  G C + 
Sbjct: 357 DMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSN 416

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
             + A  LL++++E  ++   V+++ +I  +C E +  +A   F  M +KG   S+  Y 
Sbjct: 417 RREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTY- 475

Query: 593 KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                    N F          +  + + G +   ++L   M + GL+PD +
Sbjct: 476 ---------NAF----------IERYCKKGKMEEAYKLINEMQERGLMPDTY 508



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 104/209 (49%), Gaps = 2/209 (0%)

Query: 376 PSIV-TFNSLIYGFCKNGKVADAR-RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
           PSIV  F  +++    + ++ D+   + D  +  G E    +   F+ A    GN++  +
Sbjct: 118 PSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCV 177

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
             L++M    I     ++T V+ GLCK+ ++  A  L++++   G  P  ITYNT++  +
Sbjct: 178 EFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGY 237

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
            + KD+    ++L+ M  + ++    TY +LI+    +  ++ A+ L   + +  I    
Sbjct: 238 IEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDV 297

Query: 554 VAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
             YT+II  +C  G++ +A   F +M E+
Sbjct: 298 YIYTSIINWNCKFGNMKRAFVLFDEMTER 326


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 193/358 (53%)

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           ++ +V E       +L  G       +++L+  M +SG++  A  +  EM   G+ P +V
Sbjct: 221 RLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVV 280

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           T++ L+ G+CK   ++ A  L   M    ++P+ + +GA + GLC+   I +A   F+ +
Sbjct: 281 TFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEM 340

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                  + V++  +ID + K GN+   ++L+R++  + I   +V +N+L  G C+   +
Sbjct: 341 RERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDL 400

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
             A  +++ ++ +GL+P  VTYTT ++ +C+EG +   + + QEM  + +    VTYT +
Sbjct: 401 KAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTL 460

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I GL K  +  ++ ++L +M   G+ PD  TY  +I +FCK  D++  F+LL +M     
Sbjct: 461 ISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGR 520

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
           +P   TYN++++G C+ G +KNAD LL ++    +    + Y  ++  HC  G V  A
Sbjct: 521 KPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDA 578



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 191/358 (53%)

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           S+ EA  F   +   GV P+A  +++L +      +++ A  +  ++L +G  P +VT+ 
Sbjct: 224 SVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFN 283

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            L+ G C+  ++     LR +M   G   +V  Y   +  +CK+GRI +A+ +  EM   
Sbjct: 284 TLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRER 343

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G+ P+ V ++ LI   CK+  V   ++L+ EM ++ I  +  A+ A+  GLC    +  A
Sbjct: 344 GVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAA 403

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
               + +  +    D V Y  +IDG+ K G +  A+++ +++ ++ ++   VT+ +LI G
Sbjct: 404 NDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISG 463

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
             K+G+  D+ R+L  +   GLEP   TYT  ++A+C+  +++    LL+EM+ K   P 
Sbjct: 464 LSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPG 523

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
            VTY VV+ G C   +++ A  LL  M  IGV PD ITYN ++   CK   +R A +L
Sbjct: 524 VVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEEL 581



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 190/405 (46%), Gaps = 38/405 (9%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P     N +M    + G    A+ +F  ML+ G+ P   ++N L+ G+C A  +  A   
Sbjct: 242 PEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANAL 301

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + GV PD  TY    +G     +I  A ++ +++  +G +P+ V +T LI  +C+
Sbjct: 302 RGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCK 361

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            GNV  GL+L   M ++G K +++AY+ L + +C+   +  A  ++ EM   GLKPD VT
Sbjct: 362 EGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVT 421

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI G CK+ ++  A+++  EM  + ++                              
Sbjct: 422 YTTLIDGFCKEGELDMAMEMKQEMSDEGVA------------------------------ 451

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 D V Y  +I G  K G   ++ ++  +++E  + P   T+  +I  FCKN  V 
Sbjct: 452 -----LDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVK 506

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
              +LL  ++  G +P  VTY   MN +C  G ++    LL  M    + P  +TY +++
Sbjct: 507 TGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILL 566

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLR 500
            G CK  K+++A +L       G+  D   Y ++I  F K K  +
Sbjct: 567 DGHCKHGKVRDAEELKS---AKGMVSDFGLYTSLINEFVKKKSTK 608



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 161/317 (50%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           +++D++     P  V T + ++ G+C+ S L  A       A     P V +  A M   
Sbjct: 265 NMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGL 324

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK G  + A  +F  M + G++P+   +  LI   C  G++   LE   +M   G++ D 
Sbjct: 325 CKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDL 384

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           + Y+ LA G   +  +  A  +++++   G  PD VTYT LI G+C+ G ++  +++++ 
Sbjct: 385 VAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQE 444

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M  +G  L+ + Y+ L+S + KSGR  ++  +L EM   GL+PD  TY+++I   CK   
Sbjct: 445 MSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSD 504

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
           V    +L  EM +K   P    +  ++ G C    +  A M  ++++      D + YNI
Sbjct: 505 VKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNI 564

Query: 349 MIDGYVKLGNIGEAVQL 365
           ++DG+ K G + +A +L
Sbjct: 565 LLDGHCKHGKVRDAEEL 581



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 161/334 (48%), Gaps = 5/334 (1%)

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G++  L  +S L+  L     V +A   Y ++    + P +     ++  +     +  A
Sbjct: 207 GVRVPLPAWSDLMNRL---PSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASA 263

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
           R  FD ++       VV +N ++ G  K  ++  A  L   + +  ++P + T+ + + G
Sbjct: 264 RNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQG 323

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            CK G++ DA  + + ++  G+ P+ V +TT ++A+C+EGN+   L L +EM T+ I   
Sbjct: 324 LCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTD 383

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
            V Y  +  GLC+   L+ A  ++E+M   G+ PD++TY T+I  FCK  +L  A ++  
Sbjct: 384 LVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQ 443

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
           +M    +     TY  LI GL  +G   +++ +L  + E  +      YT +I A C   
Sbjct: 444 EMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNS 503

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT--KSFFCMM 599
           DV        +M  KG +  +  Y    + FC++
Sbjct: 504 DVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCIL 537



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 148/302 (49%), Gaps = 15/302 (4%)

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           +L ++ EA   Y QL++  + P    FN L+    ++GK+A AR + D +   G+ P+ V
Sbjct: 221 RLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVV 280

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           T+ T M+  C+  ++    AL   M    + P   TY   ++GLCK  ++Q+AV++ E+M
Sbjct: 281 TFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEM 340

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              GV P+ + + T+I + CK  ++    +L  +M    ++     YN L +GLC   DL
Sbjct: 341 RERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDL 400

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-- 592
           K A+ ++  ++ + +   KV YTT+I   C EG++  AM    +M ++G  +    YT  
Sbjct: 401 KAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTL 460

Query: 593 -------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                        +   C M+  G  PD     +++ AF +  D+ + F+L   M   G 
Sbjct: 461 ISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGR 520

Query: 640 LP 641
            P
Sbjct: 521 KP 522



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 15/216 (6%)

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            + P    + ++++ + +  KL  A  + ++M   GV P  +T+NT++   CK  DL  A
Sbjct: 239 GVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSA 298

Query: 503 FQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
             L   M    + P   TY   + GLC  G +++A  +   ++E  ++   V +TT+I A
Sbjct: 299 NALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDA 358

Query: 563 HCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM-------------MLSNGFPPD 607
           HC EG+V   +    +M  +G +  +  Y    +  C              M +NG  PD
Sbjct: 359 HCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPD 418

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           +     ++  F + G+L    E+   M   G+  D+
Sbjct: 419 KVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDE 454


>gi|414878623|tpg|DAA55754.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
          Length = 891

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/568 (26%), Positives = 262/568 (46%), Gaps = 34/568 (5%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAI------LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE 115
           +V+  S  I GLC   +   A         LQE + +      ++ N ++   CK    +
Sbjct: 167 DVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDGLCKEMKLK 226

Query: 116 VAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILA 175
            A+ +  +  ++G  PD +SY+ LIH  C  G++E+A     DM  HG+E +    + L 
Sbjct: 227 EAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEINCYIVAYLL 286

Query: 176 KGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFK 235
           +    L  +S      QK    G   D V Y + +  YC++GN+ E +KL   M++    
Sbjct: 287 QCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLNEMMAGSLV 346

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            + I Y+ L++  C  G  + A  +  EM    +KPD+VTY+IL  G  +   V K   +
Sbjct: 347 PDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNGLVMKVFDI 406

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV-VLYNIMIDGYV 354
              M  + + PNS  +G  + G C    ++EA + F+ ++    I ++ VLY  M+ GY+
Sbjct: 407 LEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFN-IVEERGIDNINVLYGSMVCGYL 465

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
             G    A  L+ ++ ++      ++ + LI G C++ KV +A  +   +    + P  +
Sbjct: 466 HSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEKNVVPDVI 525

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           +Y+  ++AYC+  ++        +M  + +    + YTV++ G CK  +LQEA +L   M
Sbjct: 526 SYSKLISAYCQTRDMHNARLWFHDMVERGLSDV-IVYTVLMNGYCKVGRLQEACELFVQM 584

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQ-----------------LLNQMWLHNLEPT 517
             +G+ PD + Y  ++    K + L++ +Q                 LLN M    +EP 
Sbjct: 585 INLGIKPDVVAYTVLLDGHLK-ETLQQGWQGIAKERRTFFLRTKHKVLLNSMKDMEIEPD 643

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
              Y +LIDG C    L+ A  L   +    +      YT +I  +C++G++ KA   F 
Sbjct: 644 VTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGYCSQGEIAKAEDLFQ 703

Query: 578 QMVEKGFEISIRDYTKSFFCMMLSNGFP 605
           +M+ KG +  I       + MM   G P
Sbjct: 704 EMIAKGMKPDI-------WSMMRVIGVP 724



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 248/556 (44%), Gaps = 96/556 (17%)

Query: 22  MKELDLKVSIQTYNSLLYNL---RHTDIMWDLY------DDIKVSETPRNVYTNSIVIDG 72
           M E+ +K+ +  ++S +  L      D+ +++        +I     P      ++VIDG
Sbjct: 159 MIEMGVKLDVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDG 218

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAE---------VAKG--LF 121
           LC++ +L++A   L+        P + S + ++  +CK+G  E         V+ G  + 
Sbjct: 219 LCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEIN 278

Query: 122 CLMLKY------------------------GLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           C ++ Y                        G+H D   YNI +   C  G+M EA++  N
Sbjct: 279 CYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLN 338

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
           +M    + PD I Y+ L  G+ L  +   AW+V +++L     PD+VTY +L  GY + G
Sbjct: 339 EMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNG 398

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP------ 271
            V +   + E M+ QG + N + Y + ++  C+ G + EA  L   +E  G+        
Sbjct: 399 LVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYG 458

Query: 272 -----------------------------DLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
                                        D ++ S LI GLC+ +KV +A  +   M  K
Sbjct: 459 SMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEK 518

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + P+  ++  ++   C+   +  AR++F  ++    + DV++Y ++++GY K+G + EA
Sbjct: 519 NVVPDVISYSKLISAYCQTRDMHNARLWFHDMV-ERGLSDVIVYTVLMNGYCKVGRLQEA 577

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNG------KVADARR----------LLDTIKL 406
            +L+ Q+I   I P +V +  L+ G  K         +A  RR          LL+++K 
Sbjct: 578 CELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLNSMKD 637

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
             +EP    YT  ++  C+   ++    L  EM  K + P   TYT +I G C Q ++ +
Sbjct: 638 MEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGYCSQGEIAK 697

Query: 467 AVQLLEDMYVIGVTPD 482
           A  L ++M   G+ PD
Sbjct: 698 AEDLFQEMIAKGMKPD 713



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/560 (24%), Positives = 257/560 (45%), Gaps = 46/560 (8%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT------NDMGRHGVEPDAITYSILAKG 177
           M++ G+  D   ++  I GLC  G  + A           ++ +  V  +A+ Y+++  G
Sbjct: 159 MIEMGVKLDVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDG 218

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A KV++     GS PD+ +Y+ LI  +C++GN+E+     E M+S G ++N
Sbjct: 219 LCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEIN 278

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
               + LL  + K G + E +    +   +G+  D V Y+I +   CK   +++A++L N
Sbjct: 279 CYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLN 338

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM +  + P+   +  ++ G C K     A   F+ ++ +N   DVV YNI+  GY + G
Sbjct: 339 EMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNG 398

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + +   +   ++++ + P+ +T+   I GFC+ G +++A  L + ++  G++   V Y 
Sbjct: 399 LVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYG 458

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           + +  Y   G       L   +  +      ++ + +I GLC+  K+ EA  + + M   
Sbjct: 459 SMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEK 518

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSAT----YNILIDGLCVNGD 533
            V PD I+Y+ +I ++C+ +D+  A     ++W H++     +    Y +L++G C  G 
Sbjct: 519 NVVPDVISYSKLISAYCQTRDMHNA-----RLWFHDMVERGLSDVIVYTVLMNGYCKVGR 573

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE-------GDVHKAMTFFCQMVEKGFEI 586
           L+ A  L V +    I    VAYT ++  H  E       G   +  TFF +   K    
Sbjct: 574 LQEACELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLN 633

Query: 587 SIRD---------YT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           S++D         YT               +  F  ML+ G  PD      ++  +   G
Sbjct: 634 SMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGYCSQG 693

Query: 623 DLGSVFELAAVMIKSGLLPD 642
           ++    +L   MI  G+ PD
Sbjct: 694 EIAKAEDLFQEMIAKGMKPD 713



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 145/330 (43%), Gaps = 61/330 (18%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY------NLRHTDIMWDLYDDI 54
           +LA  YSR G+V     ++  M +  L+ +  TY   +       NL   ++++++ ++ 
Sbjct: 389 ILASGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEER 448

Query: 55  KVSETPRNVYTNSIV----------------------------------IDGLCQQSRLQ 80
            +     NV   S+V                                  I+GLC+  ++ 
Sbjct: 449 GIDNI--NVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVG 506

Query: 81  DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILI 140
           +A    +    K   P V+S + ++S YC+      A+  F  M++ GL  D   Y +L+
Sbjct: 507 EASTVCKMMLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVERGL-SDVIVYTVLM 565

Query: 141 HGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK------- 193
           +G C  G ++EA E    M   G++PD + Y++L  G HL   +   W+ I K       
Sbjct: 566 NGYCKVGRLQEACELFVQMINLGIKPDVVAYTVLLDG-HLKETLQQGWQGIAKERRTFFL 624

Query: 194 ------LLIKGSD----PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
                 LL    D    PD+  YTVLI G C+   +EE   L + ML++G   +V  Y+ 
Sbjct: 625 RTKHKVLLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTA 684

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDL 273
           L++  C  G I +A  L  EM A G+KPD+
Sbjct: 685 LINGYCSQGEIAKAEDLFQEMIAKGMKPDI 714



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 21/191 (10%)

Query: 474 MYVIGVTPDQITYNTIIRSFCKCK------DLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           M  +GV  D   +++ I   C C       ++ + + +L ++    +   +  YN++IDG
Sbjct: 159 MIEMGVKLDVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDG 218

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           LC    LK A+ +L     H  +    +Y+ +I +HC  G++ KA      MV  G EI+
Sbjct: 219 LCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEIN 278

Query: 588 IRDYTKSFFCM----MLSN-----------GFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
                    C+    M+S            G   D  +  + + A+ + G++    +L  
Sbjct: 279 CYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLN 338

Query: 633 VMIKSGLLPDK 643
            M+   L+PDK
Sbjct: 339 EMMAGSLVPDK 349



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 24/190 (12%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL-YNLRHT-DIMWD-------------- 49
           Y + G + +A  +  +M  L +K  +  Y  LL  +L+ T    W               
Sbjct: 568 YCKVGRLQEACELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTK 627

Query: 50  ---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMS 106
              L + +K  E   +V   +++IDG C+   L++A     E   K   P V +  A+++
Sbjct: 628 HKVLLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALIN 687

Query: 107 RYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE---FTNDMGRHG 163
            YC  G    A+ LF  M+  G+ PD +S   +I G+ ++G     L+    ++ +GR G
Sbjct: 688 GYCSQGEIAKAEDLFQEMIAKGMKPDIWSMMRVI-GVPMSGRRTPGLKDCSLSSALGRQG 746

Query: 164 VEPDAITYSI 173
            + D  T+S+
Sbjct: 747 EQNDG-TFSV 755


>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 566

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 206/407 (50%), Gaps = 2/407 (0%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M++ G  PD F    L++ LC A  M +A++    M   G+ PDA +Y+ L        
Sbjct: 87  FMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKG 146

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A +++ K+   G   + VTY  L+ G C  GN+ + L+L + ++ +G   N   YS
Sbjct: 147 NVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYS 206

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            LL +  K    DEA  LL E+ A G +P+LV+Y++L+ GLCK+ +   AI+L+ E+ SK
Sbjct: 207 FLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSK 266

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             SPN  ++  +L  LC +    EA +    +         V YNI+I      G    A
Sbjct: 267 GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHA 326

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           +++  ++I  R  P+  ++N +I   CK+GK+    + LD +      P+  TY   +  
Sbjct: 327 LEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA-IAT 385

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            CEEG +Q   +++Q +  K    T   Y +VI  LC++     A QLL +M   G TPD
Sbjct: 386 LCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPD 445

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
             TY+++IR  C    L +A ++ + M  +N +P +  YN LI G C
Sbjct: 446 SFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPDTENYNSLILGCC 491



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 235/474 (49%), Gaps = 3/474 (0%)

Query: 41  LRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVS 100
           LR TD  + L   ++  + P +V+  + ++  LC+  +++ AI  ++   G    P   S
Sbjct: 76  LRLTDAFFHLEFMVEKGQKP-DVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASS 134

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
              ++S  C+ G    A  L   M +YG   +  +YN L+ GLC+ G++ ++L+  + + 
Sbjct: 135 YTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLI 194

Query: 161 RHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVE 220
           + G+ P+A TYS L +  +       A K++ +++ KG +P++V+Y VL+ G C+ G  E
Sbjct: 195 QKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTE 254

Query: 221 EGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILI 280
           + ++L   + S+GF  NV++Y++LL S+C  GR +EA  LL EM      P  VTY+ILI
Sbjct: 255 DAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILI 314

Query: 281 RGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI 340
             L    +   A+++  EM   R  P + ++  I+  LC+   +       D ++  +C 
Sbjct: 315 GSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCN 374

Query: 341 QDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL 400
            +   YN  I    + G + EA  + + L  K+ S +   +  +I   C+ G    A +L
Sbjct: 375 PNEGTYN-AIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQL 433

Query: 401 LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           L  +  +G  P + TY++ +   C EG +   + +   ME     P    Y  +I G CK
Sbjct: 434 LYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPDTENYNSLILGCCK 492

Query: 461 QWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
             +   A+ + E M   G  P++ TY  ++      K++  A ++L ++ L ++
Sbjct: 493 SRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLRDV 546



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 206/399 (51%), Gaps = 1/399 (0%)

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           +++ A+  ++ ++ KG  PD+   T L+   C+   + + +K+ E+M+  G   +  +Y+
Sbjct: 77  RLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYT 136

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
            L+SS+C+ G +  A+ L+ +ME  G   + VTY+ L+RGLC    + +++QL + +  K
Sbjct: 137 FLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQK 196

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            + PN++ +  +L    ++    EA    D +I      ++V YN+++ G  K G   +A
Sbjct: 197 GLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDA 256

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++L+R+L  K  SP++V++N L+   C  G+  +A  LL  +      PS VTY   + +
Sbjct: 257 IRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGS 316

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
               G  +  L +L+EM      PT  +Y  +I  LCK  KL   V+ L+ M      P+
Sbjct: 317 LALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPN 376

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
           + TYN I  + C+   +++AF ++  +       T   Y I+I  LC  G+   A  LL 
Sbjct: 377 EGTYNAIA-TLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLY 435

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
            + ++  +     Y+++I+  C EG +++A+  F  M E
Sbjct: 436 EMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE 474



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 190/400 (47%), Gaps = 31/400 (7%)

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           K  R+ +A   L  M   G KPD+   + L+  LCK  K+ KAI++   M    I P++ 
Sbjct: 74  KELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDAS 133

Query: 310 AHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
           ++  ++  LC K  +  A    D +       + V YN ++ G    GN+ +++QL  +L
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRL 193

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
           I+K + P+  T++ L+    K     +A +LLD I   G EP+ V+Y   +   C+EG  
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRT 253

Query: 430 QRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTI 489
           +  + L +E+ +K   P  V+Y ++++ LC + + +EA  LL +M     +P  +TYN +
Sbjct: 254 EDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNIL 313

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I S         A ++L +M     +PT+++YN +I  LC +G L   D ++  L +   
Sbjct: 314 IGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKL---DLVVKCLDQ--- 367

Query: 550 SLTKVAYTTIIKAHCAEGD-VHKAMTFFCQ--MVEKGFEI--SIRDYTKSFFCMMLSNGF 604
                    ++  HC   +  + A+   C+  MV++ F I  S+ +   S          
Sbjct: 368 ---------MMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHS---------- 408

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
              QE  ++++ +  + G+    F+L   M K G  PD F
Sbjct: 409 -STQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSF 447



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 168/340 (49%), Gaps = 5/340 (1%)

Query: 33  TYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TY+ LL   Y  R  D    L D+I       N+ + ++++ GLC++ R +DAI   +E 
Sbjct: 204 TYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFREL 263

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             K F P+VVS N ++   C  G  E A  L   M      P   +YNILI  L + G  
Sbjct: 264 PSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRT 323

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           E ALE   +M R   +P A +Y+ +        ++    K + +++ +  +P+  TY   
Sbjct: 324 EHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA- 382

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I   C+ G V+E   + + + ++        Y ++++S+C+ G    A  LLYEM   G 
Sbjct: 383 IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGF 442

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            PD  TYS LIRGLC +  +++AI++++ M  +   P++  + +++LG C+      A  
Sbjct: 443 TPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENNKPDTENYNSLILGCCKSRRTDLALD 501

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            F+ ++    + +   Y I+++G +    +  A ++ R+L
Sbjct: 502 VFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLREL 541


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 178/688 (25%), Positives = 296/688 (43%), Gaps = 65/688 (9%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNV 63
           S  G +  A + + KM+E    ++  +YN L++ L   R      ++Y  + +     ++
Sbjct: 164 SVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSL 223

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T S ++ GL ++  +   +  L+E       P+V +    +    + G    A  +   
Sbjct: 224 QTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKR 283

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM--GRHGVEPDAITYSILAKGF--- 178
           M   G  PD  +Y +LI  LC A  ++ A E    M  GRH  +PD +TY  L   F   
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH--KPDRVTYITLLDRFSDN 341

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
             L  +   W  ++K    G  PD+VT+T+L+   C+ GN  E     +VM  QG   N+
Sbjct: 342 RDLDSVKQFWSEMEK---DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+ L+  + +  R+D+AL L   ME++G+KP   TY + I    K      A++ + +
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M +K I+PN  A  A L  L +     EA+  F  L     + D V YN+M+  Y K+G 
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           I EA++L  +++E    P ++  NSLI    K  +V +A ++   +K   L+P+ VTY T
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            +    + G IQ  + L + M  K   P  +T+  +   LCK  ++  A+++L  M  +G
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQM----------------------------- 509
             PD  TYNTII    K   +++A    +QM                             
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYK 698

Query: 510 ----WLHNL--EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA-YTTIIKA 562
               +L+N   +P +  +  LI  +     + NA      L  + I     +    II+ 
Sbjct: 699 IITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 758

Query: 563 HCAEGDVHKAMTFFCQMVEK-GFEISIRDYT---------------KSFFCMMLSNGFPP 606
            C   +V  A T F +  +  G +  +  Y                +  F  + S G  P
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVM 634
           D      +L A+ + G +  +FEL   M
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEM 846



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 154/607 (25%), Positives = 278/607 (45%), Gaps = 21/607 (3%)

Query: 1    MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVS 57
            M+   YS+ G + +A+ ++++M E   +  +   NSL   LY     D  W ++  +K  
Sbjct: 508  MMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567

Query: 58   ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            +    V T + ++ GL +  ++Q+AI   +    K   P+ ++ N +    CK     +A
Sbjct: 568  KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627

Query: 118  KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              +   M+  G  PD F+YN +I GL   G ++EA+ F + M +  V PD +T   L  G
Sbjct: 628  LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPG 686

Query: 178  FHLLSQISGAWKVIQKLLIKGSD-PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG--- 233
                S I  A+K+I   L   +D P  + +  LI        ++  +   E +++ G   
Sbjct: 687  VVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICR 746

Query: 234  ----FKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQDK 288
                  + +I YS      CK   +  A  L  +  + +G++P L TY++LI GL + D 
Sbjct: 747  DGDSILVPIIRYS------CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADM 800

Query: 289  VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
            +  A  ++ ++ S    P+   +  +L    +   I E    +  +    C  + + +NI
Sbjct: 801  IEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNI 860

Query: 349  MIDGYVKLGNIGEAVQLYRQLIEKR-ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I G VK GN+ +A+ LY  L+  R  SP+  T+  LI G  K+G++ +A++L + +  +
Sbjct: 861  VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920

Query: 408  GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
            G  P+   Y   +N + + G      AL + M  + + P   TY+V++  LC   ++ E 
Sbjct: 921  GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980

Query: 468  VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL-HNLEPTSATYNILID 526
            +   +++   G+ PD + YN II    K   L +A  L N+M     + P   TYN LI 
Sbjct: 981  LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040

Query: 527  GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
             L + G ++ A  +   +Q   +      +  +I+ +   G    A   +  MV  GF  
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1100

Query: 587  SIRDYTK 593
            +   Y +
Sbjct: 1101 NTGTYEQ 1107



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 246/482 (51%), Gaps = 6/482 (1%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +F LM K  +  D  +Y  +   L + G +++A      M   G   +A +Y+ L    H
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGL---IH 196

Query: 180 LLSQ---ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           LL +    + A +V ++++++G  P + TY+ L+ G  +  +++  + L + M + G K 
Sbjct: 197 LLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKP 256

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NV  +++ +  + ++G+I+EA  +L  M+  G  PD+VTY++LI  LC   K+  A +++
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            +M + R  P+   +  +L    +   +   + ++  +     + DVV + I++D   K 
Sbjct: 317 EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA 376

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           GN GEA      + ++ I P++ T+N+LI G  +  ++ DA  L   ++  G++P+A TY
Sbjct: 377 GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
             F++ Y + G+    L   ++M+TK I P  V     +  L K  + +EA Q+   +  
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
           IG+ PD +TYN +++ + K  ++ +A +LL++M  +  EP     N LI+ L     +  
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFF 596
           A  + + ++E  +  T V Y T++      G + +A+  F  MV+KG   +   +   F 
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616

Query: 597 CM 598
           C+
Sbjct: 617 CL 618



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 259/560 (46%), Gaps = 7/560 (1%)

Query: 25  LDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQD 81
           L+L  + +T N +L  LR     + M  ++D ++     R+  T   +   L  +  L+ 
Sbjct: 112 LNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQ 171

Query: 82  AILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNIL 139
           A   L++   +EFG   +  S N ++    K  F   A  ++  M+  G  P   +Y+ L
Sbjct: 172 APYALRKM--REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSL 229

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           + GL     ++  +    +M   G++P+  T++I  +      +I+ A+++++++  +G 
Sbjct: 230 MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 289

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            PD+VTYTVLI   C    ++   ++ E M +   K + + Y  LL     +  +D    
Sbjct: 290 GPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQ 349

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
              EME  G  PD+VT++IL+  LCK     +A    + M  + I PN   +  ++ GL 
Sbjct: 350 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
               + +A   F ++           Y + ID Y K G+   A++ + ++  K I+P+IV
Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
             N+ +Y   K G+  +A+++   +K  GL P +VTY   M  Y + G I   + LL EM
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
                 P  +    +I  L K  ++ EA ++   M  + + P  +TYNT++    K   +
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
           ++A +L   M      P + T+N L D LC N ++  A  +L  + +         Y TI
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649

Query: 560 IKAHCAEGDVHKAMTFFCQM 579
           I      G V +AM FF QM
Sbjct: 650 IFGLVKNGQVKEAMCFFHQM 669



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 163/718 (22%), Positives = 295/718 (41%), Gaps = 99/718 (13%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVY 64
            + G   +A   +  M++  +  ++ TYN+L   L  +   D   +L+ +++        Y
Sbjct: 375  KAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T  + ID   +      A+   ++   K   P++V+ NA +    K G    AK +F  +
Sbjct: 435  TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 494

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
               GL PD+ +YN+++      G ++EA++  ++M  +G EPD I  + L    +   ++
Sbjct: 495  KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
              AWK+  ++      P +VTY  L+ G  + G ++E ++L E M+ +G   N I ++ L
Sbjct: 555  DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614

Query: 245  LSSMCKSGRIDEALGLLYEMEAVG----------------------------------LK 270
               +CK+  +  AL +L++M  +G                                  + 
Sbjct: 615  FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY 674

Query: 271  PDLVTYSILIRGLCKQDKVHKAIQ-----LYNEMC------------------------- 300
            PD VT   L+ G+ K   +  A +     LYN  C                         
Sbjct: 675  PDFVTLCTLLPGVVKASLIEDAYKIITNFLYN--CADQPANLFWEDLIGSILAEAGIDNA 732

Query: 301  ---SKRISPNSFAHG--AILLGL----CEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMI 350
               S+R+  N       +IL+ +    C+   ++ AR  F+       +Q  +  YN++I
Sbjct: 733  VSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI 792

Query: 351  DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
             G ++   I  A  ++ Q+      P + T+N L+  + K+GK+ +   L   +  H  E
Sbjct: 793  GGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 852

Query: 411  PSAVTYTTFMNAYCEEGNIQRLLALLQE-METKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
             + +T+   ++   + GN+   L L  + M  +   PT  TY  +I GL K  +L EA Q
Sbjct: 853  ANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQ 912

Query: 470  LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
            L E M   G  P+   YN +I  F K  +   A  L  +M    + P   TY++L+D LC
Sbjct: 913  LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC 972

Query: 530  VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
            + G +         L+E  ++   V Y  II        + +A+  F +           
Sbjct: 973  MVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE----------- 1021

Query: 590  DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                    M  S G  PD      +++     G +    ++   + ++GL P+ F  N
Sbjct: 1022 --------MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1071



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 166/351 (47%), Gaps = 3/351 (0%)

Query: 74   CQQSRLQDA-ILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
            C+ + +  A  LF + T      P + + N ++    +    E+A+ +F  +   G  PD
Sbjct: 760  CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819

Query: 133  AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
              +YN L+     +G ++E  E   +M  H  E + IT++I+  G      +  A  +  
Sbjct: 820  VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879

Query: 193  KLLI-KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
             L+  +   P   TY  LI G  + G + E  +L E ML  G + N   Y++L++   K+
Sbjct: 880  DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939

Query: 252  GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            G  D A  L   M   G++PDL TYS+L+  LC   +V + +  + E+    ++P+   +
Sbjct: 940  GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999

Query: 312  GAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
              I+ GL +   + EA + F+ +  S  I  D+  YN +I      G + EA ++Y ++ 
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059

Query: 371  EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
               + P++ TFN+LI G+  +GK   A  +  T+   G  P+  TY    N
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 166/325 (51%), Gaps = 8/325 (2%)

Query: 65   TNSIVIDGLCQQSRL---QDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
            T +++I GL +   +   QD  L ++ T      P V + N ++  Y K G  +    L+
Sbjct: 787  TYNLLIGGLLEADMIEIAQDVFLQVKSTGCI---PDVATYNFLLDAYGKSGKIDELFELY 843

Query: 122  CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTND-MGRHGVEPDAITYSILAKGFHL 180
              M  +    +  ++NI+I GL  AG++++AL+   D M      P A TY  L  G   
Sbjct: 844  KEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK 903

Query: 181  LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              ++  A ++ + +L  G  P+   Y +LI G+ + G  +    L + M+ +G + ++  
Sbjct: 904  SGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKT 963

Query: 241  YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
            YSVL+  +C  GR+DE L    E++  GL PD+V Y+++I GL K  ++ +A+ L+NEM 
Sbjct: 964  YSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMK 1023

Query: 301  SKR-ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            + R I+P+ + + +++L L    M+ EA   ++ +  +    +V  +N +I GY   G  
Sbjct: 1024 TSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKP 1083

Query: 360  GEAVQLYRQLIEKRISPSIVTFNSL 384
              A  +Y+ ++    SP+  T+  L
Sbjct: 1084 EHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/419 (22%), Positives = 178/419 (42%), Gaps = 15/419 (3%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +L ++   G+++E   +   M+   +K D  TY  + + L  +  + +A     +M    
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
              N++++  ++  L +    TEA   +  +I+      +  Y+ ++ G  K  +I   +
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVM 243

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L +++    + P++ TF   I    + GK+ +A  +L  +   G  P  VTYT  ++A 
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C    +     + ++M+T    P  VTY  ++        L    Q   +M   G  PD 
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV 363

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +T+  ++ + CK  +  +AF  L+ M    + P   TYN LI GL     L +A  L  +
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI--------------R 589
           ++   +  T   Y   I  +   GD   A+  F +M  KG   +I              R
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483

Query: 590 DY-TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
           D   K  F  +   G  PD     +M+  + + G++    +L + M+++G  PD  ++N
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVN 542



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/353 (19%), Positives = 139/353 (39%), Gaps = 21/353 (5%)

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS-NCIQDVVLYNIM 349
           K+      M  K   P+  +   +  GL        +  YF S+  + N +      N M
Sbjct: 65  KSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYM 124

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           ++     G + E   ++  + ++ I     T+ ++       G +  A   L  ++  G 
Sbjct: 125 LEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGF 184

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQ 469
             +A +Y   ++   +       + + + M  +   P+  TY+ ++ GL K+  +   + 
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244

Query: 470 LLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           LL++M  +G+ P+  T+   IR   +   + +A+++L +M      P   TY +LID LC
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304

Query: 530 VNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
               L  A  +   ++       +V Y T++       D+                    
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL-------------------- 344

Query: 590 DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           D  K F+  M  +G  PD     +++ A  + G+ G  F+   VM   G+LP+
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/581 (24%), Positives = 279/581 (48%), Gaps = 6/581 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSE 58
           L + + + G V  A  +  +M E  +   I   NS++  L   +  D    +   +  S 
Sbjct: 54  LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 113

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +++T S++IDGLC+   +  A   L++       P+ ++ N+++  Y   G    + 
Sbjct: 114 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 173

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M   G+ P   + N  IH L   G   EA    + M   G +PD I+YS +  G+
Sbjct: 174 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 233

Query: 179 HLLSQ--ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
              +   ++    +   +L KG  P+   + +LI  Y + G +++ + + E M ++G   
Sbjct: 234 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 293

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + + ++ ++SS+C+ GR+D+AL     M  +G+ P    Y  LI+G C   ++ KA +L 
Sbjct: 294 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 353

Query: 297 NEMCSKRISPNSFAH-GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +EM +K I P    +  +I+  LC++  + E +   D ++ +    +VV +N +++GY  
Sbjct: 354 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 413

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +GN+ EA  L   +    I P+   + +L+ G+CKNG++ DA  +   +   G++P++V 
Sbjct: 414 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 473

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y+  ++   +         +  EM       +  TY VV+ GLC+     EA  LLE ++
Sbjct: 474 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 533

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            + V  D IT+N +I +  K    ++A +L + +  + L P   TY+++I  L      +
Sbjct: 534 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 593

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            AD L +S+++   +        I++    + +V KA  + 
Sbjct: 594 EADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYL 634



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 245/499 (49%), Gaps = 4/499 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P++ + N ++  Y ++   ++   +   +LK GL PD FSY+ LI+G    G +++A   
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 70

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M   GV P  +  + + K    + ++  A  ++QK++  G  PD+ TY+++I G C+
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              +++  ++ E M+  G + N I Y+ L+     SG  +E++ +  +M + G+ P +  
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG--LCEKEMITEARMYFDS 333
            +  I  L K  + ++A  +++ M  K   P+  ++  +L G        + +    F+ 
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++      +  ++NI+I+ Y + G + +A+ ++  +  K + P  VTF ++I   C+ G+
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 310

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY-T 452
           + DA    + +   G+ PS   Y   +   C  G + +   L+ EM  K I P  V Y +
Sbjct: 311 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 370

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I  LCK+ ++ E   +++ M   G  P+ +T+N+++  +C   ++ +AF LL+ M   
Sbjct: 371 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 430

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            +EP    Y  L+DG C NG + +A  +   +    +  T V Y+ I+           A
Sbjct: 431 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 490

Query: 573 MTFFCQMVEKGFEISIRDY 591
              F +M+E G  +SI  Y
Sbjct: 491 KKMFHEMIESGTTVSIHTY 509



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/576 (23%), Positives = 254/576 (44%), Gaps = 86/576 (14%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I G  +   +  A     E   +   P ++  N+I+   CK+   + A+ +   M+  G
Sbjct: 54  LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 113

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + PD F+Y+++I GLC + +M++A      M   G  P++ITY+ L  G+     ISG W
Sbjct: 114 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGY----SISGMW 169

Query: 189 K---------------------------------------VIQKLLIKGSDPDIVTYTVL 209
                                                   +   +++KG  PDI++Y+ +
Sbjct: 170 NESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTM 229

Query: 210 ICGYCQIGN--VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           + GY    +  + +   +  +ML++G   N   +++L+++  + G +D+A+ +  +M+  
Sbjct: 230 LHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 289

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G+ PD VT++ +I  LC+  ++  A+  +N M    + P+   +G ++ G C        
Sbjct: 290 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNH------ 343

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT-FNSLIY 386
                                        G + +A +L  +++ K I P  V  F+S+I 
Sbjct: 344 -----------------------------GELVKAKELISEMMNKDIPPPGVKYFSSIIN 374

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             CK G+VA+ + ++D +   G  P+ VT+ + M  YC  GN++   ALL  M +  I P
Sbjct: 375 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 434

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
               Y  ++ G CK  ++ +A+ +  DM   GV P  + Y+ I+    + +    A ++ 
Sbjct: 435 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMF 494

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           ++M       +  TY +++ GLC N     A+ LL  L   N+    + +  +I A    
Sbjct: 495 HEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKV 554

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
           G   +A   F  +   G   +I+ Y+     MM++N
Sbjct: 555 GRRQEAKELFDAISTYGLVPNIQTYS-----MMITN 585



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 220/467 (47%), Gaps = 19/467 (4%)

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           + S P I TY +LI  Y ++   + GL +   +L  G   +  +YS L+    K G +D+
Sbjct: 8   RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 66

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A  L  EM   G+ P ++  + +I+ LCK  ++ KA  +  +M    I+P+ F +  I+ 
Sbjct: 67  AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 126

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           GLC+ + + +A    + ++ +    + + YN +I GY   G   E+V++++Q+    + P
Sbjct: 127 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 186

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN--IQRLLA 434
           ++   NS I+   K+G+  +A+ + D++ L G +P  ++Y+T ++ Y    +  +  +  
Sbjct: 187 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 246

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +   M TK I P    + ++I    +   + +A+ + EDM   G+ PD +T+ T+I S C
Sbjct: 247 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 306

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           +   L  A    N M    + P+ A Y  LI G C +G+L  A  L+  +   +I    V
Sbjct: 307 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 366

Query: 555 AY-TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM------------- 598
            Y ++II   C EG V +       MV+ G   ++  +      +C+             
Sbjct: 367 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 426

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           M S G  P+  I   ++  + + G +     +   M+  G+ P   L
Sbjct: 427 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 473



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 128/548 (23%), Positives = 246/548 (44%), Gaps = 12/548 (2%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVYTNSIVIDGL 73
           V+ +M E   + +  TYNSL++    +  MW+    ++  +        V   +  I  L
Sbjct: 140 VLEQMVEAGTRPNSITYNSLIHGYSISG-MWNESVRVFKQMSSCGVIPTVDNCNSFIHAL 198

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK--GLFCLMLKYGLHP 131
            +  R  +A         K   P ++S + ++  Y     + +A    +F LML  G+ P
Sbjct: 199 FKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAP 258

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           +   +NILI+     G M++A+    DM   G+ PD +T++ +      + ++  A    
Sbjct: 259 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 318

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY-SVLLSSMCK 250
             ++  G  P    Y  LI G C  G + +  +L   M+++      + Y S +++++CK
Sbjct: 319 NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCK 378

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            GR+ E   ++  M   G +P++VT++ L+ G C    + +A  L + M S  I PN + 
Sbjct: 379 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 438

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +G ++ G C+   I +A   F  ++        VLY+I++ G  +      A +++ ++I
Sbjct: 439 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 498

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           E   + SI T+  ++ G C+N    +A  LL+ +    ++   +T+   ++A  + G  Q
Sbjct: 499 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 558

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L   + T  + P   TY+++I  L K+   +EA  L   +   G   D    N I+
Sbjct: 559 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 618

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
           R      ++ KA   L+ +  +NL   ++T ++L       G  +      + L   N++
Sbjct: 619 RMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREH----IKLLPANMT 674

Query: 551 LTKVAYTT 558
           +  VA T 
Sbjct: 675 MAVVAATA 682



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 188/407 (46%), Gaps = 8/407 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y+R GM+  A+ +   M+   +     T+ +++ +L    R  D +      + +
Sbjct: 265 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 324

Query: 57  SETPRN-VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVS-LNAIMSRYCKLGFA 114
              P   VY    +I G C    L  A   + E   K+  P  V   ++I++  CK G  
Sbjct: 325 GVPPSEAVY--GCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRV 382

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
              K +  +M++ G  P+  ++N L+ G C+ G+MEEA    + M   G+EP+   Y  L
Sbjct: 383 AEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTL 442

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G+    +I  A  V + +L KG  P  V Y++++ G  Q        K+   M+  G 
Sbjct: 443 VDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGT 502

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
            +++  Y V+L  +C++   DEA  LL ++ A+ +K D++T++I+I  + K  +  +A +
Sbjct: 503 TVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKE 562

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L++ + +  + PN   +  ++  L ++E   EA   F S+  S    D  L N ++   +
Sbjct: 563 LFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLL 622

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
               + +A      + E  ++    T + L   F + GK  +  +LL
Sbjct: 623 NKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 669


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 231/462 (50%), Gaps = 23/462 (4%)

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
            K F P++++ N I+   CKLG  + A   F  M     +PD F+Y+ L++GLC    ++
Sbjct: 191 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 250

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           EA+   ++M   G  P+ +T+++L         +S A K++  + +KG  P+ VTY  LI
Sbjct: 251 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 310

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C  G +++ L L E M+S     N + Y  +++ + K  R ++ + +L  ME  G K
Sbjct: 311 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 370

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
            +   YS LI GL K+ K   A++L+ EM  K   PN   +GA + GLC  E   EA   
Sbjct: 371 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 430

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
              ++    + +   Y+ ++ G+ K G+  +A+ ++++++ + +  ++V  + L+ G C+
Sbjct: 431 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCE 490

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG--PTH 448
           +G++ +A  +   +   GL+P  V Y++ +   C+ G++ + L L  EM+ +     P  
Sbjct: 491 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 550

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK------------- 495
           VTY ++   LC+Q  L  A+ LL  M   G  PD +T N  + +  +             
Sbjct: 551 VTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLD 610

Query: 496 ------CKDLRK--AFQLLNQMWLHNLEPTSATYNILIDGLC 529
                  K  RK  A +++ +M L  L P  +T++ +I   C
Sbjct: 611 ELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTC 652



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 228/475 (48%), Gaps = 19/475 (4%)

Query: 33  TYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN     L  L   D   D + ++ +     +V+T S +++GLC++ R+ +A+  L E 
Sbjct: 200 TYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM 259

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             +   P+ V+ N ++    K G    A  L   M   G  P+  +YN LIHGLC+ G +
Sbjct: 260 QAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 319

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           ++AL     M      P+ +TY  +  G     +      ++  +  +G   +   Y+ L
Sbjct: 320 DKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSL 379

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G  + G  E  ++L + M  +G K NV+ Y   +  +C+  + DEA  +L EM + G 
Sbjct: 380 ISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGF 439

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P+  TYS L++G  K+    KAI ++ EM S+ +  N      +L GLCE   + EA  
Sbjct: 440 LPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALT 499

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY--RQLIEKRISPSIVTFNSLIYG 387
            +  ++      DVV Y+ MI G   +G++ + ++L+   Q  E +  P +VT+N L   
Sbjct: 500 VWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNA 559

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            C+   +  A  LL+++   G +P ++T   F+    E  N  +   L  +         
Sbjct: 560 LCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLD--------- 610

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
                +V++ L ++ KL  A++++E+M +  + P+  T++ +I+  CK K +R+ 
Sbjct: 611 ----ELVVRLLKRERKLS-ALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 660



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 185/349 (53%)

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           S+GF+ N++ Y++++ ++CK G+ID A+    EM      PD+ TYS L+ GLCK+ +V 
Sbjct: 191 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 250

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A+ L +EM ++   PN      ++  L +   ++ A    D++ +  C+ + V YN +I
Sbjct: 251 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 310

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            G    G + +A+ L  +++  +  P+ VT+ ++I G  K  +  D   +L +++  G +
Sbjct: 311 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 370

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
            +   Y++ ++   +EG  +  + L +EM  K   P  V Y   I GLC+  K  EA  +
Sbjct: 371 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 430

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L++M   G  P+  TY+++++ F K  D +KA  +  +M   ++       ++L++GLC 
Sbjct: 431 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCE 490

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           +G L+ A  +   +    +    VAY+++IK  C  G V K +  F +M
Sbjct: 491 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 539



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 193/385 (50%), Gaps = 37/385 (9%)

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           KG  P+++TY ++I   C++G ++  +     M  +    +V  YS L++ +CK  R+DE
Sbjct: 192 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 251

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+ LL EM+A G  P+ VT+++LI  L K   + +A +L + M  K   PN   +  ++ 
Sbjct: 252 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 311

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL-------------------- 356
           GLC K  + +A    + ++ S C+ + V Y  +I+G VK                     
Sbjct: 312 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 371

Query: 357 ---------------GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
                          G    AV+L++++ EK   P++V + + I G C++ K  +A  +L
Sbjct: 372 NEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDIL 431

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +   G  P+A TY++ M  + ++G+ Q+ + + +EM ++ +    V  +V++ GLC+ 
Sbjct: 432 QEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCES 491

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE--PTSA 519
            +L+EA+ +   M   G+ PD + Y+++I+  C    + K  +L  +M     +  P   
Sbjct: 492 GRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVV 551

Query: 520 TYNILIDGLCVNGDLKNADCLLVSL 544
           TYNIL + LC   +L  A  LL S+
Sbjct: 552 TYNILFNALCRQDNLTRAIDLLNSM 576



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 155/342 (45%), Gaps = 20/342 (5%)

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           SK   PN   +  I+  LC+   I  A   F  + + NC  DV  Y+ +++G  K   + 
Sbjct: 191 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 250

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EAV L  ++  +   P+ VTFN LI    KNG ++ A +L+D + L G  P+ VTY T +
Sbjct: 251 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 310

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C +G + + L+LL++M +    P  VTY  +I GL KQ + ++ V +L  M   G  
Sbjct: 311 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 370

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            ++  Y+++I    K      A +L  +M     +P    Y   IDGLC +     A+ +
Sbjct: 371 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 430

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
           L  +           Y++++K    +GD  KA+  + +M+ +       D   +  C   
Sbjct: 431 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQ-------DMRHNVVC--- 480

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                     C V+L    + G L     +   M+  GL PD
Sbjct: 481 ----------CSVLLNGLCESGRLREALTVWTHMLGEGLKPD 512



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 142/308 (46%), Gaps = 26/308 (8%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
             D V ++  M+E   K +   Y+SL   L+    ++    L+ ++       NV     
Sbjct: 354 AEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGA 413

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
            IDGLC+  +  +A   LQE   K F P+  + +++M  + K G ++ A  ++  M+   
Sbjct: 414 FIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQD 473

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           +  +    ++L++GLC +G + EAL     M   G++PD + YS + KG   +  +    
Sbjct: 474 MRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGL 533

Query: 189 KVIQKLLIK--GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           K+  ++  +   S PD+VTY +L    C+  N+   + L   ML +G   + +  ++ L 
Sbjct: 534 KLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLE 593

Query: 247 SM------CKSGR--IDE-------------ALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
           ++       + GR  +DE             AL ++ EM    L P+  T+S +I+  CK
Sbjct: 594 TLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCK 653

Query: 286 QDKVHKAI 293
             ++ + I
Sbjct: 654 PKRIRETI 661


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 224/452 (49%), Gaps = 1/452 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P   S N ++ ++ +LG  +  K  F  M+  G  P  F+YNI+I  +C  G +E A   
Sbjct: 96  PKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGL 155

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M   G+ PD +TY+ +  G+  + ++       +++     +PD++TY  LI  +C+
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCK 215

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G + +GL+    M   G K NV++YS L+ + CK   + +AL    +M  +GL P+  T
Sbjct: 216 FGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHT 275

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ L+   CK   +  A +L +EM    +  N   + A++ GLC+ E I EA   F  ++
Sbjct: 276 YTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMV 335

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            +  I ++  Y  +I G+VK  N+  A++L  ++  + I P ++ + + I+  C   K+ 
Sbjct: 336 TAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIE 395

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A+ +++ ++  G++ +   YTT M+AY +  N    L LL+EM    I  T VT+ V+I
Sbjct: 396 AAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLI 455

Query: 456 KGLCKQWKLQEAVQLLEDMYV-IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
            GLCK   + +A+     +    G+  +   Y  +I   CK   +  A  L  QM    L
Sbjct: 456 DGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGL 515

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
            P    Y  LIDG    G++  A  L   + E
Sbjct: 516 VPDRTAYTSLIDGKLKQGNVVQALALRDKMAE 547



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 233/473 (49%), Gaps = 4/473 (0%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           M  +A+   +KMK   +    ++ N LL+    L  TD M   + D+  + +   V+T +
Sbjct: 78  MFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYN 137

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
           I+ID +C++  ++ A    +E   +   P  V+ N+++  Y K+G  +     F  M   
Sbjct: 138 IMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSM 197

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
              PD  +YN LI+  C  G + + LEF  +M + G++P+ ++YS L   F     +  A
Sbjct: 198 SCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQA 257

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
            K    +   G  P+  TYT L+  YC+IGN+ +  +L + M   G + NV+ Y+ L+  
Sbjct: 258 LKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDG 317

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C   RI EA  L  +M   G+ P+L +Y+ LI G  K   + +A++L +EM  + I P+
Sbjct: 318 LCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPD 377

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +G  +  LC  E I  A++  + +       +  +Y  ++D Y K  N  E + L  
Sbjct: 378 LLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLE 437

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH-GLEPSAVTYTTFMNAYCEE 426
           +++E  I  + VTF  LI G CKN  V+ A      I    GL+ +A  YT  ++  C+E
Sbjct: 438 EMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKE 497

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
             ++    L ++M  K + P    YT +I G  KQ  + +A+ L + M  IGV
Sbjct: 498 DQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGV 550



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 239/495 (48%), Gaps = 1/495 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P     +A+ S   +    E A   F  M +  + P   S N L+H     G  +    F
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             DM   G +P   TY+I+         I  A  + +++  +G  PD VTY  +I GY +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
           +G +++ +   E M S   + +VI Y+ L++  CK G++ + L    EM+  GLKP++V+
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           YS L+   CK+D + +A++ Y +M    + PN   + +++   C+   +++A    D + 
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMS 300

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 +VV Y  +IDG   +  I EA +L+ +++   + P++ ++ +LI+GF K   + 
Sbjct: 301 QVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMD 360

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  LLD +K  G++P  + Y TF+ + C    I+    ++ EM+ K I      YT ++
Sbjct: 361 RALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLM 420

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH-NL 514
               K     E + LLE+M  + +    +T+  +I   CK K + KA     ++     L
Sbjct: 421 DAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGL 480

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMT 574
           +  +A Y  +IDGLC    ++ A  L   + +  +   + AYT++I     +G+V +A+ 
Sbjct: 481 QANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALA 540

Query: 575 FFCQMVEKGFEISIR 589
              +M E G E   R
Sbjct: 541 LRDKMAEIGVESGAR 555



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 223/444 (50%), Gaps = 1/444 (0%)

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           EEAL+  + M R  V P   + + L   F  L +  G  +  + ++  GS P + TY ++
Sbjct: 80  EEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIM 139

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I   C+ G++E    L E M  +G   + + Y+ ++    K GR+D+ +    EM+++  
Sbjct: 140 IDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSC 199

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           +PD++TY+ LI   CK  K+ K ++ + EM    + PN  ++  ++   C+++M+ +A  
Sbjct: 200 EPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALK 259

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
           ++  +     + +   Y  ++D Y K+GN+ +A +L  ++ +  +  ++VT+ +LI G C
Sbjct: 260 FYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLC 319

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
              ++ +A  L   +   G+ P+  +YT  ++ + +  N+ R L LL EM+ + I P  +
Sbjct: 320 DVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLL 379

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            Y   I  LC   K++ A  ++ +M   G+  +   Y T++ ++ K ++  +   LL +M
Sbjct: 380 LYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEM 439

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNA-DCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
              ++E T+ T+ +LIDGLC N  +  A D       +  +      YT +I   C E  
Sbjct: 440 LELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQ 499

Query: 569 VHKAMTFFCQMVEKGFEISIRDYT 592
           V  A T F QM +KG       YT
Sbjct: 500 VEAATTLFEQMAQKGLVPDRTAYT 523



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 166/352 (47%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           +  L S + +    +EAL    +M+   + P   + + L+    +  K     + + +M 
Sbjct: 66  FDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMI 125

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
                P  F +  ++  +C++  I  A   F+ +     I D V YN MIDGY K+G + 
Sbjct: 126 GAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLD 185

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           + V  + ++      P ++T+N+LI  FCK GK+         +K  GL+P+ V+Y+T +
Sbjct: 186 DTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLV 245

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +A+C+E  +Q+ L    +M    + P   TYT ++   CK   L +A +L ++M  +GV 
Sbjct: 246 DAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVE 305

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            + +TY  +I   C  + +++A +L  +M    + P  A+Y  LI G     ++  A  L
Sbjct: 306 WNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALEL 365

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           L  ++   I    + Y T I + C    +  A     +M EKG + +   YT
Sbjct: 366 LDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYT 417



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 189/409 (46%), Gaps = 33/409 (8%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y + G + D V+   +MK +  +  + TYN+L                            
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNTL---------------------------- 209

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
               I+  C+  +L   + F +E       P+VVS + ++  +CK    + A   +  M 
Sbjct: 210 ----INCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMR 265

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + GL P+  +Y  L+   C  G++ +A    ++M + GVE + +TY+ L  G   + +I 
Sbjct: 266 RLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIK 325

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A ++  K++  G  P++ +YT LI G+ +  N++  L+L + M  +G K +++ Y   +
Sbjct: 326 EAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFI 385

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
            S+C   +I+ A  ++ EM+  G+K +   Y+ L+    K +   + + L  EM    I 
Sbjct: 386 WSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIE 445

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQ 364
             +     ++ GLC+ +++++A  YF  +     +Q +  +Y  MIDG  K   +  A  
Sbjct: 446 VTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATT 505

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
           L+ Q+ +K + P    + SLI G  K G V  A  L D +   G+E  A
Sbjct: 506 LFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGA 554



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 15/322 (4%)

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
           C+    +++ +    ++     EA+Q + ++   R+ P   + N L++ F + GK    +
Sbjct: 59  CVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMK 118

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           R    +   G +P+  TY   ++  C+EG+I+    L +EM+ + + P  VTY  +I G 
Sbjct: 119 RFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGY 178

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
            K  +L + V   E+M  +   PD ITYNT+I  FCK   L K  +   +M    L+P  
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNV 238

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            +Y+ L+D  C    ++ A    V ++   +   +  YT+++ A+C  G++  A     +
Sbjct: 239 VSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADE 298

Query: 579 MVEKGFEISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           M + G E ++  YT               +  F  M++ G  P+      ++  F +  +
Sbjct: 299 MSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKN 358

Query: 624 LGSVFELAAVMIKSGLLPDKFL 645
           +    EL   M   G+ PD  L
Sbjct: 359 MDRALELLDEMKGRGIKPDLLL 380


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 156/578 (26%), Positives = 273/578 (47%), Gaps = 35/578 (6%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S +I  LC   R  DA   L +TAG   G  VV+ NA+++ YC+ G    A+    L   
Sbjct: 48  SALIRSLCAAGRTADAARAL-DTAGDAAG--VVAYNAMIAGYCRAGQVAAARR---LAAA 101

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + P+A++Y  ++  LC  G + +AL   ++M   G         ++ +          
Sbjct: 102 VPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A + +Q L  KG   D     +++   C+ G V+EG++L   + S G + ++++Y+ +L 
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ---DKVHKAIQLYNEMCSKR 303
            +C + R D+   L+ EM  VG  P++ T++ LI  LC+    ++VH+A+   ++M    
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEAL---SQMPEHG 278

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +P+   +  I+ G+C+      A      +       +VV YN ++ G        EA 
Sbjct: 279 CTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAE 338

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            L  ++ ++      VTFN L+  FC+NG V     LL+ +  HG  P  +TYTT +N +
Sbjct: 339 DLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 398

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+EG +   + LL+ M      P  ++YT+V+KGLC+  +  +A +L+  M   G  P+ 
Sbjct: 399 CKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNP 458

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +T+NT+I   CK   + +A +LL QM ++   P   +Y+ +IDGL   G  + A  LL  
Sbjct: 459 VTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 518

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR-------------- 589
           +    I+   + Y+++  A   EG   K +    QM +   + ++R              
Sbjct: 519 MINKGITPNTIIYSSMASALSREGRTDKII----QMFDSIQDATVRSDAALYNAVISSLC 574

Query: 590 -----DYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
                D    FF  M+SNG  P++    +++      G
Sbjct: 575 KRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEG 612



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 128/528 (24%), Positives = 254/528 (48%), Gaps = 10/528 (1%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEVAK 118
           P N YT   ++  LC +  + DA+  L E   +    +    + I+   C+ G F    +
Sbjct: 105 PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVR 164

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            L  L  K G   D+ + N+++  +C  G ++E +E    +   G EPD ++Y+ + KG 
Sbjct: 165 ALQVLHAK-GCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 179 HLLSQISGAWKVIQKLLIK----GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
            +  +    W  +++L+++    G  P++ T+  LI   C+ G  E+  +    M   G 
Sbjct: 224 CMAKR----WDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGC 279

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             ++  Y+ ++  +CK G  + A  +L  M + GLKP++V Y+ +++GLC  ++  +A  
Sbjct: 280 TPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAED 339

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L  EM  +    +      ++   C+  ++       + ++   CI DV+ Y  +I+G+ 
Sbjct: 340 LLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFC 399

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K G + EAV L + +      P+ +++  ++ G C+  +  DA+ L+  +   G  P+ V
Sbjct: 400 KEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPV 459

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           T+ T +N  C++G +++ + LL++M      P  ++Y+ VI GL K  K +EA++LL  M
Sbjct: 460 TFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 519

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+TP+ I Y+++  +  +     K  Q+ + +    +   +A YN +I  LC   + 
Sbjct: 520 INKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWET 579

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
             A      +  +     +  YT +I+   +EG V +A     ++  +
Sbjct: 580 DRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 627



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 195/469 (41%), Gaps = 18/469 (3%)

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           + L   G    +V Y  +I GYC+ G V    +L   +       N   Y  ++ S+C  
Sbjct: 65  RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV---PVPPNAYTYFPIVRSLCAR 121

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G I +AL +L EM   G         +++   C+      A++    + +K  + +S   
Sbjct: 122 GLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNC 181

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             ++  +CE+  + E       L    C  D+V YN ++ G        +  +L  +++ 
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
               P++ TFN+LI   C+NG        L  +  HG  P    Y T ++  C++G+ + 
Sbjct: 242 VGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEV 301

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
              +L  M +  + P  V Y  V+KGLC   + +EA  LL +M+      D +T+N ++ 
Sbjct: 302 ANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD 361

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            FC+   + +  +LL QM  H   P   TY  +I+G C  G +  A  LL ++       
Sbjct: 362 FFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKP 421

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC------------ 597
             ++YT ++K  C       A      M+++G   +   +    +F C            
Sbjct: 422 NTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELL 481

Query: 598 -MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
             ML NG  PD      ++    + G      EL  VMI  G+ P+  +
Sbjct: 482 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTII 530



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 184/369 (49%), Gaps = 3/369 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVY 64
           R G+       +++M E      ++ Y +++  +    H ++  D+   +       NV 
Sbjct: 260 RNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVV 319

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
             + V+ GLC   R ++A   L E   ++     V+ N ++  +C+ G  +    L   M
Sbjct: 320 CYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 379

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L++G  PD  +Y  +I+G C  G ++EA+    +M   G +P+ I+Y+I+ KG     + 
Sbjct: 380 LEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERW 439

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A ++I  ++ +G  P+ VT+  LI   C+ G VE+ ++L + ML  G   ++I+YS +
Sbjct: 440 VDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 499

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  + K+G+ +EAL LL  M   G+ P+ + YS +   L ++ +  K IQ+++ +    +
Sbjct: 500 IDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATV 559

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             ++  + A++  LC++     A  +F  ++ + C+ +   Y I+I G    G + EA  
Sbjct: 560 RSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQD 619

Query: 365 LYRQLIEKR 373
           L  +L  +R
Sbjct: 620 LLSELCSRR 628



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 118/341 (34%), Gaps = 79/341 (23%)

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHG-----------------------------LEP 411
            ++LI   C  G+ ADA R LDT                                  + P
Sbjct: 47  LSALIRSLCAAGRTADAARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPVPP 106

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT----HV------------------ 449
           +A TY   + + C  G I   L +L EM  +    T    HV                  
Sbjct: 107 NAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRAL 166

Query: 450 -------------TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
                           +V+  +C+Q  + E V+LL  +   G  PD ++YN +++  C  
Sbjct: 167 QVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMA 226

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
           K      +L+ +M      P  AT+N LI  LC NG  +     L  + EH  +     Y
Sbjct: 227 KRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMY 286

Query: 557 TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---------------TKSFFCMMLS 601
            TII   C +G    A     +M   G + ++  Y                +     M  
Sbjct: 287 ATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQ 346

Query: 602 NGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
              P D     +++  F Q G +  V EL   M++ G +PD
Sbjct: 347 EDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPD 387


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 231/462 (50%), Gaps = 23/462 (4%)

Query: 91  GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSME 150
            K F P++++ N I+   CKLG  + A   F  M     +PD F+Y+ L++GLC    ++
Sbjct: 167 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 226

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           EA+   ++M   G  P+ +T+++L         +S A K++  + +KG  P+ VTY  LI
Sbjct: 227 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 286

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C  G +++ L L E M+S     N + Y  +++ + K  R ++ + +L  ME  G K
Sbjct: 287 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 346

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
            +   YS LI GL K+ K   A++L+ EM  K   PN   +GA + GLC  E   EA   
Sbjct: 347 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 406

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
              ++    + +   Y+ ++ G+ K G+  +A+ ++++++ + +  ++V  + L+ G C+
Sbjct: 407 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCE 466

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG--PTH 448
           +G++ +A  +   +   GL+P  V Y++ +   C+ G++ + L L  EM+ +     P  
Sbjct: 467 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 526

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK------------- 495
           VTY ++   LC+Q  L  A+ LL  M   G  PD +T N  + +  +             
Sbjct: 527 VTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLD 586

Query: 496 ------CKDLRK--AFQLLNQMWLHNLEPTSATYNILIDGLC 529
                  K  RK  A +++ +M L  L P  +T++ +I   C
Sbjct: 587 ELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTC 628



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 228/475 (48%), Gaps = 19/475 (4%)

Query: 33  TYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN     L  L   D   D + ++ +     +V+T S +++GLC++ R+ +A+  L E 
Sbjct: 176 TYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM 235

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             +   P+ V+ N ++    K G    A  L   M   G  P+  +YN LIHGLC+ G +
Sbjct: 236 QAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 295

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           ++AL     M      P+ +TY  +  G     +      ++  +  +G   +   Y+ L
Sbjct: 296 DKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSL 355

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G  + G  E  ++L + M  +G K NV+ Y   +  +C+  + DEA  +L EM + G 
Sbjct: 356 ISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGF 415

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            P+  TYS L++G  K+    KAI ++ EM S+ +  N      +L GLCE   + EA  
Sbjct: 416 LPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALT 475

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY--RQLIEKRISPSIVTFNSLIYG 387
            +  ++      DVV Y+ MI G   +G++ + ++L+   Q  E +  P +VT+N L   
Sbjct: 476 VWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNA 535

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
            C+   +  A  LL+++   G +P ++T   F+    E  N  +   L  +         
Sbjct: 536 LCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLD--------- 586

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
                +V++ L ++ KL  A++++E+M +  + P+  T++ +I+  CK K +R+ 
Sbjct: 587 ----ELVVRLLKRERKLS-ALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 636



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 185/349 (53%)

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           S+GF+ N++ Y++++ ++CK G+ID A+    EM      PD+ TYS L+ GLCK+ +V 
Sbjct: 167 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 226

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A+ L +EM ++   PN      ++  L +   ++ A    D++ +  C+ + V YN +I
Sbjct: 227 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 286

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            G    G + +A+ L  +++  +  P+ VT+ ++I G  K  +  D   +L +++  G +
Sbjct: 287 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 346

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
            +   Y++ ++   +EG  +  + L +EM  K   P  V Y   I GLC+  K  EA  +
Sbjct: 347 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 406

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCV 530
           L++M   G  P+  TY+++++ F K  D +KA  +  +M   ++       ++L++GLC 
Sbjct: 407 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCE 466

Query: 531 NGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           +G L+ A  +   +    +    VAY+++IK  C  G V K +  F +M
Sbjct: 467 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 515



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 193/385 (50%), Gaps = 37/385 (9%)

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           KG  P+++TY ++I   C++G ++  +     M  +    +V  YS L++ +CK  R+DE
Sbjct: 168 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 227

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+ LL EM+A G  P+ VT+++LI  L K   + +A +L + M  K   PN   +  ++ 
Sbjct: 228 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 287

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL-------------------- 356
           GLC K  + +A    + ++ S C+ + V Y  +I+G VK                     
Sbjct: 288 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 347

Query: 357 ---------------GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
                          G    AV+L++++ EK   P++V + + I G C++ K  +A  +L
Sbjct: 348 NEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDIL 407

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +   G  P+A TY++ M  + ++G+ Q+ + + +EM ++ +    V  +V++ GLC+ 
Sbjct: 408 QEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCES 467

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE--PTSA 519
            +L+EA+ +   M   G+ PD + Y+++I+  C    + K  +L  +M     +  P   
Sbjct: 468 GRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVV 527

Query: 520 TYNILIDGLCVNGDLKNADCLLVSL 544
           TYNIL + LC   +L  A  LL S+
Sbjct: 528 TYNILFNALCRQDNLTRAIDLLNSM 552



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 155/342 (45%), Gaps = 20/342 (5%)

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           SK   PN   +  I+  LC+   I  A   F  + + NC  DV  Y+ +++G  K   + 
Sbjct: 167 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 226

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           EAV L  ++  +   P+ VTFN LI    KNG ++ A +L+D + L G  P+ VTY T +
Sbjct: 227 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 286

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           +  C +G + + L+LL++M +    P  VTY  +I GL KQ + ++ V +L  M   G  
Sbjct: 287 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 346

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            ++  Y+++I    K      A +L  +M     +P    Y   IDGLC +     A+ +
Sbjct: 347 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 406

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMML 600
           L  +           Y++++K    +GD  KA+  + +M+ +       D   +  C   
Sbjct: 407 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQ-------DMRHNVVC--- 456

Query: 601 SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                     C V+L    + G L     +   M+  GL PD
Sbjct: 457 ----------CSVLLNGLCESGRLREALTVWTHMLGEGLKPD 488



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 142/308 (46%), Gaps = 26/308 (8%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
             D V ++  M+E   K +   Y+SL   L+    ++    L+ ++       NV     
Sbjct: 330 AEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGA 389

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
            IDGLC+  +  +A   LQE   K F P+  + +++M  + K G ++ A  ++  M+   
Sbjct: 390 FIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQD 449

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           +  +    ++L++GLC +G + EAL     M   G++PD + YS + KG   +  +    
Sbjct: 450 MRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGL 509

Query: 189 KVIQKLLIK--GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           K+  ++  +   S PD+VTY +L    C+  N+   + L   ML +G   + +  ++ L 
Sbjct: 510 KLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLE 569

Query: 247 SM------CKSGR--IDE-------------ALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
           ++       + GR  +DE             AL ++ EM    L P+  T+S +I+  CK
Sbjct: 570 TLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCK 629

Query: 286 QDKVHKAI 293
             ++ + I
Sbjct: 630 PKRIRETI 637


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/581 (24%), Positives = 279/581 (48%), Gaps = 6/581 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSE 58
           L + + + G V  A  +  +M E  +   I   NS++  L   +  D    +   +  S 
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +++T S++IDGLC+   +  A   L++       P+ ++ N+++  Y   G    + 
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M   G+ P   + N  IH L   G   EA    + M   G +PD I+YS +  G+
Sbjct: 336 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 395

Query: 179 HLLSQ--ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
              +   ++    +   +L KG  P+   + +LI  Y + G +++ + + E M ++G   
Sbjct: 396 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 455

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + + ++ ++SS+C+ GR+D+AL     M  +G+ P    Y  LI+G C   ++ KA +L 
Sbjct: 456 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 515

Query: 297 NEMCSKRISPNSFAH-GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +EM +K I P    +  +I+  LC++  + E +   D ++ +    +VV +N +++GY  
Sbjct: 516 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 575

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +GN+ EA  L   +    I P+   + +L+ G+CKNG++ DA  +   +   G++P++V 
Sbjct: 576 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 635

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y+  ++   +         +  EM       +  TY VV+ GLC+     EA  LLE ++
Sbjct: 636 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 695

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            + V  D IT+N +I +  K    ++A +L + +  + L P   TY+++I  L      +
Sbjct: 696 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 755

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            AD L +S+++   +        I++    + +V KA  + 
Sbjct: 756 EADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYL 796



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 245/499 (49%), Gaps = 4/499 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P++ + N ++  Y ++   ++   +   +LK GL PD FSY+ LI+G    G +++A   
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M   GV P  +  + + K    + ++  A  ++QK++  G  PD+ TY+++I G C+
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              +++  ++ E M+  G + N I Y+ L+     SG  +E++ +  +M + G+ P +  
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG--LCEKEMITEARMYFDS 333
            +  I  L K  + ++A  +++ M  K   P+  ++  +L G        + +    F+ 
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 412

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++      +  ++NI+I+ Y + G + +A+ ++  +  K + P  VTF ++I   C+ G+
Sbjct: 413 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 472

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY-T 452
           + DA    + +   G+ PS   Y   +   C  G + +   L+ EM  K I P  V Y +
Sbjct: 473 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 532

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I  LCK+ ++ E   +++ M   G  P+ +T+N+++  +C   ++ +AF LL+ M   
Sbjct: 533 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 592

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            +EP    Y  L+DG C NG + +A  +   +    +  T V Y+ I+           A
Sbjct: 593 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 652

Query: 573 MTFFCQMVEKGFEISIRDY 591
              F +M+E G  +SI  Y
Sbjct: 653 KKMFHEMIESGTTVSIHTY 671



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/576 (23%), Positives = 254/576 (44%), Gaps = 86/576 (14%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I G  +   +  A     E   +   P ++  N+I+   CK+   + A+ +   M+  G
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + PD F+Y+++I GLC + +M++A      M   G  P++ITY+ L  G+     ISG W
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGY----SISGMW 331

Query: 189 K---------------------------------------VIQKLLIKGSDPDIVTYTVL 209
                                                   +   +++KG  PDI++Y+ +
Sbjct: 332 NESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTM 391

Query: 210 ICGYCQIGN--VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           + GY    +  + +   +  +ML++G   N   +++L+++  + G +D+A+ +  +M+  
Sbjct: 392 LHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 451

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G+ PD VT++ +I  LC+  ++  A+  +N M    + P+   +G ++ G C        
Sbjct: 452 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNH------ 505

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT-FNSLIY 386
                                        G + +A +L  +++ K I P  V  F+S+I 
Sbjct: 506 -----------------------------GELVKAKELISEMMNKDIPPPGVKYFSSIIN 536

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             CK G+VA+ + ++D +   G  P+ VT+ + M  YC  GN++   ALL  M +  I P
Sbjct: 537 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 596

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
               Y  ++ G CK  ++ +A+ +  DM   GV P  + Y+ I+    + +    A ++ 
Sbjct: 597 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMF 656

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           ++M       +  TY +++ GLC N     A+ LL  L   N+    + +  +I A    
Sbjct: 657 HEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKV 716

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
           G   +A   F  +   G   +I+ Y+     MM++N
Sbjct: 717 GRRQEAKELFDAISTYGLVPNIQTYS-----MMITN 747



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 220/467 (47%), Gaps = 19/467 (4%)

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           + S P I TY +LI  Y ++   + GL +   +L  G   +  +YS L+    K G +D+
Sbjct: 170 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 228

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A  L  EM   G+ P ++  + +I+ LCK  ++ KA  +  +M    I+P+ F +  I+ 
Sbjct: 229 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 288

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           GLC+ + + +A    + ++ +    + + YN +I GY   G   E+V++++Q+    + P
Sbjct: 289 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 348

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN--IQRLLA 434
           ++   NS I+   K+G+  +A+ + D++ L G +P  ++Y+T ++ Y    +  +  +  
Sbjct: 349 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 408

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +   M TK I P    + ++I    +   + +A+ + EDM   G+ PD +T+ T+I S C
Sbjct: 409 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 468

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           +   L  A    N M    + P+ A Y  LI G C +G+L  A  L+  +   +I    V
Sbjct: 469 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 528

Query: 555 AY-TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM------------- 598
            Y ++II   C EG V +       MV+ G   ++  +      +C+             
Sbjct: 529 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 588

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           M S G  P+  I   ++  + + G +     +   M+  G+ P   L
Sbjct: 589 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 635



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 235/514 (45%), Gaps = 8/514 (1%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVYTNSIVIDGL 73
           V+ +M E   + +  TYNSL++    +  MW+    ++  +        V   +  I  L
Sbjct: 302 VLEQMVEAGTRPNSITYNSLIHGYSISG-MWNESVRVFKQMSSCGVIPTVDNCNSFIHAL 360

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK--GLFCLMLKYGLHP 131
            +  R  +A         K   P ++S + ++  Y     + +A    +F LML  G+ P
Sbjct: 361 FKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAP 420

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           +   +NILI+     G M++A+    DM   G+ PD +T++ +      + ++  A    
Sbjct: 421 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 480

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY-SVLLSSMCK 250
             ++  G  P    Y  LI G C  G + +  +L   M+++      + Y S +++++CK
Sbjct: 481 NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCK 540

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            GR+ E   ++  M   G +P++VT++ L+ G C    + +A  L + M S  I PN + 
Sbjct: 541 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 600

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +G ++ G C+   I +A   F  ++        VLY+I++ G  +      A +++ ++I
Sbjct: 601 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 660

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           E   + SI T+  ++ G C+N    +A  LL+ +    ++   +T+   ++A  + G  Q
Sbjct: 661 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 720

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L   + T  + P   TY+++I  L K+   +EA  L   +   G   D    N I+
Sbjct: 721 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 780

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           R      ++ KA   L+ +  +NL   ++T ++L
Sbjct: 781 RMLLNKAEVAKASNYLSIIGENNLTLEASTISLL 814



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 188/407 (46%), Gaps = 8/407 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y+R GM+  A+ +   M+   +     T+ +++ +L    R  D +      + +
Sbjct: 427 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 486

Query: 57  SETPRN-VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVS-LNAIMSRYCKLGFA 114
              P   VY    +I G C    L  A   + E   K+  P  V   ++I++  CK G  
Sbjct: 487 GVPPSEAVY--GCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRV 544

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
              K +  +M++ G  P+  ++N L+ G C+ G+MEEA    + M   G+EP+   Y  L
Sbjct: 545 AEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTL 604

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G+    +I  A  V + +L KG  P  V Y++++ G  Q        K+   M+  G 
Sbjct: 605 VDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGT 664

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
            +++  Y V+L  +C++   DEA  LL ++ A+ +K D++T++I+I  + K  +  +A +
Sbjct: 665 TVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKE 724

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L++ + +  + PN   +  ++  L ++E   EA   F S+  S    D  L N ++   +
Sbjct: 725 LFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLL 784

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLL 401
               + +A      + E  ++    T + L   F + GK  +  +LL
Sbjct: 785 NKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 831


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 230/458 (50%), Gaps = 4/458 (0%)

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           ++R CK G    A      M+K G  PD      LI GL  +   E+A+     + ++G 
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG- 142

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
           +PD+  Y+ +  GF    +   A +VI ++  +G  PD+VTY +LI   C  G ++  LK
Sbjct: 143 DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALK 202

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           + + +L       VI Y++L+ +    G ID+A+ LL EM + GL+PD+ TY++++RG+C
Sbjct: 203 VMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMC 262

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K+  V +A +  + +     +P+   +  +L GL  +            +I+  C  ++V
Sbjct: 263 KRGLVDRAFEFVSNL---NTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIV 319

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            Y+++I    + G  GEAV + R + EK ++P    ++ LI  FCK GKV  A   +D +
Sbjct: 320 TYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDM 379

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G  P  V Y T M + C++G     L + +++E     P   +Y  +   L      
Sbjct: 380 ISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDK 439

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
             A+ ++ +M   GV PD+ITYN++I S C+   + +A  LL  M     +PT  +YNI+
Sbjct: 440 IRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIV 499

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKA 562
           + GLC    + +A  +L  + ++     +  YT +++ 
Sbjct: 500 LLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEG 537



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 230/453 (50%), Gaps = 4/453 (0%)

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           ++ LC  G   EAL F   M + G +PD I  + L KG     +   A +V++ +L +  
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVME-ILEQYG 142

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
           DPD   Y  +I G+C+    +   ++   M  +GF  +V+ Y++L+ S+C  G++D AL 
Sbjct: 143 DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALK 202

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           ++ ++      P ++TY+ILI        +  A++L +EM S+ + P+ + +  I+ G+C
Sbjct: 203 VMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMC 262

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           ++ ++  A  +  +L   N    + LYN+++ G +  G      +L   +I K   P+IV
Sbjct: 263 KRGLVDRAFEFVSNL---NTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIV 319

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T++ LI   C++GK  +A  +L  +K  GL P A  Y   ++A+C+EG +   +  + +M
Sbjct: 320 TYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDM 379

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
            +    P  V Y  ++  LCK+ +  EA+ + + +  +G  P+  +YNT+  +     D 
Sbjct: 380 ISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDK 439

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
            +A  ++ +M  + ++P   TYN LI  LC +G +  A  LLV ++      T ++Y  +
Sbjct: 440 IRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIV 499

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           +   C    +  A+     MV+ G + +   YT
Sbjct: 500 LLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYT 532



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 228/454 (50%), Gaps = 33/454 (7%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
            ++ LC+  +  +A+ FL++   + + P V+    ++         E A  +  ++ +YG
Sbjct: 83  ALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG 142

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD+F+YN +I G C +   + A      M   G  PD +TY+IL        ++  A 
Sbjct: 143 -DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLAL 201

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           KV+ +LL    +P ++TYT+LI      G++++ ++L + M+S+G + ++  Y+V++  M
Sbjct: 202 KVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGM 261

Query: 249 CKSGRIDEAL--------------------------------GLLYEMEAVGLKPDLVTY 276
           CK G +D A                                  L+ +M   G +P++VTY
Sbjct: 262 CKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTY 321

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           S+LI  LC+  K  +A+ +   M  K ++P+++ +  ++   C++  +  A  + D +I 
Sbjct: 322 SVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMIS 381

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           +  + D+V YN ++    K G   EA+ ++++L E    P+  ++N++      +G    
Sbjct: 382 AGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIR 441

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A  ++  +  +G++P  +TY + +++ C +G +   + LL +ME     PT ++Y +V+ 
Sbjct: 442 ALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLL 501

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           GLCK  ++ +A+++L  M   G  P++ TY  ++
Sbjct: 502 GLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLV 535



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 221/477 (46%), Gaps = 36/477 (7%)

Query: 31  IQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA 90
           ++  N L    ++T+ ++ L   +K    P +V   + +I GL    R + A+  ++   
Sbjct: 81  MKALNRLCKTGKYTEALYFLEQMVKRGYKP-DVILCTKLIKGLFTSKRTEKAVRVMEIL- 138

Query: 91  GKEFG-PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
            +++G P   + NA++S +C+    + A  +   M   G  PD  +YNILI  LC  G +
Sbjct: 139 -EQYGDPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKL 197

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           + AL+  + +      P  ITY+IL +   +   I  A +++ +++ +G  PD+ TY V+
Sbjct: 198 DLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVI 257

Query: 210 ICGYCQIGNV--------------------------------EEGLKLREVMLSQGFKLN 237
           + G C+ G V                                E G +L   M+ +G + N
Sbjct: 258 VRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPN 317

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           ++ YSVL+SS+C+ G+  EA+ +L  M+  GL PD   Y  LI   CK+ KV  AI   +
Sbjct: 318 IVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVD 377

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M S    P+   +  I+  LC+K    EA   F  L    C  +   YN M       G
Sbjct: 378 DMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSG 437

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           +   A+ +  +++   + P  +T+NSLI   C++G V +A  LL  ++    +P+ ++Y 
Sbjct: 438 DKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYN 497

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
             +   C+   I   + +L  M      P   TYT++++G+        AV+L + +
Sbjct: 498 IVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSL 554



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 163/384 (42%), Gaps = 48/384 (12%)

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           H   L  LC+    TEA  + + ++      DV+L   +I G        +AV++  +++
Sbjct: 80  HMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVM-EIL 138

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           E+   P    +N++I GFC++ +   A R++  +K  G  P  VTY   + + C  G + 
Sbjct: 139 EQYGDPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLD 198

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
             L ++ ++      PT +TYT++I+       + +A++LL++M   G+ PD  TYN I+
Sbjct: 199 LALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIV 258

Query: 491 RSFCKCKDLRKAFQ--------------------------------LLNQMWLHNLEPTS 518
           R  CK   + +AF+                                L++ M +   EP  
Sbjct: 259 RGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNI 318

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TY++LI  LC +G    A  +L  ++E  ++     Y  +I A C EG V  A+ F   
Sbjct: 319 VTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDD 378

Query: 579 MVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGD 623
           M+  G+   I +Y                 + F  +   G PP+      M  A    GD
Sbjct: 379 MISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGD 438

Query: 624 LGSVFELAAVMIKSGLLPDKFLIN 647
                 +   M+ +G+ PD+   N
Sbjct: 439 KIRALTMILEMLSNGVDPDRITYN 462



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 165/376 (43%), Gaps = 67/376 (17%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T +I+I  LC + +L  A+  + +       P+V++   ++      G  + A  L 
Sbjct: 180 DVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLL 239

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDM-------------------GR- 161
             M+  GL PD ++YN+++ G+C  G ++ A EF +++                   GR 
Sbjct: 240 DEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRW 299

Query: 162 ------------HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
                        G EP+ +TYS+L        +   A  V++ +  KG +PD   Y  L
Sbjct: 300 EAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPL 359

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG- 268
           I  +C+ G V+  +   + M+S G+  +++ Y+ ++ S+CK GR DEAL +  ++E VG 
Sbjct: 360 ISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGC 419

Query: 269 ----------------------------------LKPDLVTYSILIRGLCKQDKVHKAIQ 294
                                             + PD +TY+ LI  LC+   V +AI 
Sbjct: 420 PPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIG 479

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L  +M      P   ++  +LLGLC+   I +A      ++ + C  +   Y ++++G  
Sbjct: 480 LLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVG 539

Query: 355 KLGNIGEAVQLYRQLI 370
             G    AV+L + L+
Sbjct: 540 YAGWRSYAVELAKSLV 555



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 155/309 (50%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIV 69
           G + DA+ ++ +M    L+  + TYN ++  +    ++   ++ +    T  ++   +++
Sbjct: 230 GSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLL 289

Query: 70  IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGL 129
           + GL  + R +     + +   K   P++V+ + ++S  C+ G A  A  +  +M + GL
Sbjct: 290 LKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGL 349

Query: 130 HPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWK 189
           +PDA+ Y+ LI   C  G ++ A+ F +DM   G  PD + Y+ +        +   A  
Sbjct: 350 NPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALN 409

Query: 190 VIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMC 249
           + +KL   G  P+  +Y  +       G+    L +   MLS G   + I Y+ L+SS+C
Sbjct: 410 IFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLC 469

Query: 250 KSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSF 309
           + G +DEA+GLL +ME    +P +++Y+I++ GLCK  ++  AI++   M      PN  
Sbjct: 470 RDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNET 529

Query: 310 AHGAILLGL 318
            +  ++ G+
Sbjct: 530 TYTLLVEGV 538


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 267/550 (48%), Gaps = 19/550 (3%)

Query: 110 KLGFAEVAKGLFCLMLKYGLH--PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           K    + A+ +  LM + G++  P+AF   ++ +    AG + +AL+    M R GVEP+
Sbjct: 222 KTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSR--AGQLRDALKVLTLMQRAGVEPN 279

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            +  +     F   +++  A + ++++ + G  P++VTY  +I GYC +  VEE ++L +
Sbjct: 280 LLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLD 339

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM-EAVGLKPDLVTYSILIRGLCKQ 286
            M S+G   + ++Y  ++  +CK  RI E   L+ +M +  GL  D VTY+ LI  L K 
Sbjct: 340 DMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKH 399

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQDVVL 345
           D   +A+    +   K    +   + AI+  LC++  ++EA+   + ++   +C  DVV 
Sbjct: 400 DHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVT 459

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y  +++G+ +LG + +A +L + +      P+ V++ +L+ G C+ GK  +AR +++  +
Sbjct: 460 YTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSE 519

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
                P+++TY+  M+   +EG +     +++EM  K   P  V   ++++ LC+  +  
Sbjct: 520 EQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTH 579

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           EA + +E+    G   + + + T+I  FC+  +L  A  +L+ M+L N      TY  L+
Sbjct: 580 EARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLV 639

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV-------------HKA 572
           D L   G +  A  L+  +    I  T V Y T+I  +C    V              K 
Sbjct: 640 DALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKC 699

Query: 573 MTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
            T + Q++EK   +   +        +L      D + C  ++  + + G     +++A 
Sbjct: 700 KTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIGVPLLAYKVAC 759

Query: 633 VMIKSGLLPD 642
            M    L+PD
Sbjct: 760 RMFNRNLIPD 769



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 154/556 (27%), Positives = 265/556 (47%), Gaps = 8/556 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNS---LLYNLRHTDIMWDLYDDIKVSETPRN 62
           YSR G + DA+ V+  M+   ++ ++   N+   +       +      + ++V     N
Sbjct: 255 YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPN 314

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           V T + +I G C   R+++AI  L +   K   P  VS   IM   CK       + L  
Sbjct: 315 VVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 374

Query: 123 LMLK-YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            M K +GL  D  +YN LIH L      +EAL F  D    G   D + YS +       
Sbjct: 375 KMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKE 434

Query: 182 SQISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
            ++S A  +I ++L KG   PD+VTYT ++ G+C++G V++  KL ++M + G+K N ++
Sbjct: 435 GRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVS 494

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ LL+ +C++G+  EA  ++   E     P+ +TYS+L+ GL K+ K+ +A  +  EM 
Sbjct: 495 YTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMV 554

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K   P       +L  LC      EAR + +  +   C  +VV +  +I G+ +   + 
Sbjct: 555 LKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELD 614

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A+ +   +        + T+ +L+    K G++A+A  L+  +   G++P+ VTY T +
Sbjct: 615 AALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 674

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + YC+   +  L+A+L++M  +    T   Y  VI+ LC   KL+EA +LL  +      
Sbjct: 675 HRYCQMEKVDDLVAILEKMILRQKCKT--IYNQVIEKLCGLGKLEEADKLLGKVLRTASR 732

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
            D  T   ++  + K      A+++  +M+  NL P       L   L V G   + + L
Sbjct: 733 SDAKTCYALMEGYLKIGVPLLAYKVACRMFNRNLIPDVKMCEKLSKRLVVEGAGNDNNML 792

Query: 541 L-VSLQEHNISLTKVA 555
           L  SL   N+ +   A
Sbjct: 793 LYFSLVSDNLQIPSEA 808


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/511 (27%), Positives = 232/511 (45%), Gaps = 41/511 (8%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P    YN LI        ++       D+   G +PD  T ++L +      ++  A +V
Sbjct: 108 PPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRV 167

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
            + + ++       ++ +L  GYC+ G   + LK+ + M S    +N++  + +++  CK
Sbjct: 168 FEAMPVRNE----FSFGILARGYCRAGRSVDALKVLDGMPS----MNLVVCNTVVAGFCK 219

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR----ISP 306
            G ++EA  L+  M   GL P++VT++  I  LCK  +V  A +++ +M          P
Sbjct: 220 EGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRP 279

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +      +L G C+   + EAR+  D +     ++ V  YN  + G V+ G +GEA +L 
Sbjct: 280 DQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELL 339

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           R++  +RI P+  T+N ++ G CK GK  DARR+ + I+   + P  VTYT+ ++AYC +
Sbjct: 340 REMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSK 399

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           GNI     +L EM  K   P   TY V+++ L +  +  EA +LLE M   G + D    
Sbjct: 400 GNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGC 459

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLE-----------------------PTSATYNI 523
           N II   C+   L  A  +++ MW                            P   TY+I
Sbjct: 460 NIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSI 519

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           LI  LC  G    A   L+ +   +IS   V Y T I  +C  G    A+     M +KG
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579

Query: 584 FEISIRDYTKSFFCMMLSNGFPPDQEICEVM 614
              S R Y       +L  GF    +  E+M
Sbjct: 580 CNPSTRTYN------LLIRGFEEKHKSDEIM 604



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 148/532 (27%), Positives = 240/532 (45%), Gaps = 40/532 (7%)

Query: 34  YNSL-LYNLRHT--DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDA-ILFLQET 89
           YN L L  LR +  D++  LY D+ ++    +V+T ++++  LC   R++ A  +F    
Sbjct: 113 YNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRVFEAMP 172

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
              EF     S   +   YC+ G +  A  +   M    L       N ++ G C  G +
Sbjct: 173 VRNEF-----SFGILARGYCRAGRSVDALKVLDGMPSMNL----VVCNTVVAGFCKEGLV 223

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV---IQKLLIKG-SDPDIVT 205
           EEA      M   G+ P+ +T++          ++  A+++   +Q+    G   PD VT
Sbjct: 224 EEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVT 283

Query: 206 YTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
           + V++ G+C  G V+E   L ++M   GF   V +Y+  LS + ++GR+ EA  LL EM 
Sbjct: 284 FDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMA 343

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
              + P+  TY+I++ GLCK+ K   A ++ N + S  +SP+   + ++L   C K  I 
Sbjct: 344 HERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIA 403

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
            A    D +    C  +   YN+++    + G   EA +L  ++ EK  S      N +I
Sbjct: 404 AANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIII 463

Query: 386 YGFCKNGKVADARRLLDTIKLHGLE-----------------------PSAVTYTTFMNA 422
            G C+N K+  A  ++D +   G                         P  +TY+  ++A
Sbjct: 464 DGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISA 523

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+EG        L EM  K I P  V Y   I G CK  K   A+++L DM   G  P 
Sbjct: 524 LCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPS 583

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
             TYN +IR F +     +  +L+++M    + P   TYN LI   C  G L
Sbjct: 584 TRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGML 635



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 225/471 (47%), Gaps = 23/471 (4%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVS 57
           +LA  Y R G   DA+ V+  M  ++L V     N+++       ++ +   L + ++V 
Sbjct: 181 ILARGYCRAGRSVDALKVLDGMPSMNLVVC----NTVVAGFCKEGLVEEAERLVERMRVQ 236

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFG---PSVVSLNAIMSRYCKLGF 113
               NV T +  I  LC+  R+ DA  +F       + G   P  V+ + ++S +C  GF
Sbjct: 237 GLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGF 296

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            + A+ L  +M   G      SYN  + GL   G + EA E   +M    + P++ TY+I
Sbjct: 297 VDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNI 356

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +  G     +   A +V   +      PD+VTYT L+  YC  GN+    ++ + M  +G
Sbjct: 357 IVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKG 416

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              N   Y+VLL S+ ++GR  EA  LL  M   G   D    +I+I GLC+  K+  A+
Sbjct: 417 CAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAM 476

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            + + M         +  G+  LG      ++   +  DS I   C+ D + Y+I+I   
Sbjct: 477 GIVDGM---------WEEGSTALGRLGNSFLS---VVSDSSISQRCLPDRITYSILISAL 524

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K G   EA +   ++I K ISP  V +++ I+G+CK+GK + A ++L  ++  G  PS 
Sbjct: 525 CKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPST 584

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
            TY   +  + E+     ++ L+ EME K + P  +TY  +IK  C+Q  L
Sbjct: 585 RTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGML 635



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 154/348 (44%), Gaps = 26/348 (7%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR---NVYT 65
            G V +A  ++  M+       +++YN  L  L     + + ++ ++     R   N YT
Sbjct: 294 AGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYT 353

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            +I++ GLC++ +  DA             P VV+  +++  YC  G    A  +   M 
Sbjct: 354 YNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMA 413

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           + G  P++F+YN+L+  L  AG   EA      M   G   D    +I+  G    S++ 
Sbjct: 414 QKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLD 473

Query: 186 GAWKVIQKLLIKGSD-----------------------PDIVTYTVLICGYCQIGNVEEG 222
            A  ++  +  +GS                        PD +TY++LI   C+ G  +E 
Sbjct: 474 VAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEA 533

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
            K    M+ +    + + Y   +   CK G+   A+ +L +ME  G  P   TY++LIRG
Sbjct: 534 KKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRG 593

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
             ++ K  + ++L +EM  K +SPN   + +++   C++ M+T   ++
Sbjct: 594 FEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGMLTRPCLF 641


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/581 (24%), Positives = 279/581 (48%), Gaps = 6/581 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSE 58
           L + + + G V  A  +  +M E  +   I   NS++  L   +  D    +   +  S 
Sbjct: 140 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 199

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +++T S++IDGLC+   +  A   L++       P+ ++ N+++  Y   G    + 
Sbjct: 200 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 259

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M   G+ P   + N  IH L   G   EA    + M   G +PD I+YS +  G+
Sbjct: 260 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 319

Query: 179 HLLSQ--ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
              +   ++    +   +L KG  P+   + +LI  Y + G +++ + + E M ++G   
Sbjct: 320 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 379

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + + ++ ++SS+C+ GR+D+AL     M  +G+ P    Y  LI+G C   ++ KA +L 
Sbjct: 380 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 439

Query: 297 NEMCSKRISPNSFAH-GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +EM +K I P    +  +I+  LC++  + E +   D ++ +    +VV +N +++GY  
Sbjct: 440 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 499

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +GN+ EA  L   +    I P+   + +L+ G+CKNG++ DA  +   +   G++P++V 
Sbjct: 500 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 559

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y+  ++   +         +  EM       +  TY VV+ GLC+     EA  LLE ++
Sbjct: 560 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 619

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            + V  D IT+N +I +  K    ++A +L + +  + L P   TY+++I  L      +
Sbjct: 620 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 679

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            AD L +S+++   +        I++    + +V KA  + 
Sbjct: 680 EADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYL 720



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 245/499 (49%), Gaps = 4/499 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P++ + N ++  Y ++   ++   +   +LK GL PD FSY+ LI+G    G +++A   
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 156

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M   GV P  +  + + K    + ++  A  ++QK++  G  PD+ TY+++I G C+
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              +++  ++ E M+  G + N I Y+ L+     SG  +E++ +  +M + G+ P +  
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG--LCEKEMITEARMYFDS 333
            +  I  L K  + ++A  +++ M  K   P+  ++  +L G        + +    F+ 
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++      +  ++NI+I+ Y + G + +A+ ++  +  K + P  VTF ++I   C+ G+
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 396

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY-T 452
           + DA    + +   G+ PS   Y   +   C  G + +   L+ EM  K I P  V Y +
Sbjct: 397 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 456

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I  LCK+ ++ E   +++ M   G  P+ +T+N+++  +C   ++ +AF LL+ M   
Sbjct: 457 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 516

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            +EP    Y  L+DG C NG + +A  +   +    +  T V Y+ I+           A
Sbjct: 517 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 576

Query: 573 MTFFCQMVEKGFEISIRDY 591
              F +M+E G  +SI  Y
Sbjct: 577 KKMFHEMIESGTTVSIHTY 595



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/576 (23%), Positives = 254/576 (44%), Gaps = 86/576 (14%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I G  +   +  A     E   +   P ++  N+I+   CK+   + A+ +   M+  G
Sbjct: 140 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 199

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + PD F+Y+++I GLC + +M++A      M   G  P++ITY+ L  G+     ISG W
Sbjct: 200 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGY----SISGMW 255

Query: 189 K---------------------------------------VIQKLLIKGSDPDIVTYTVL 209
                                                   +   +++KG  PDI++Y+ +
Sbjct: 256 NESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTM 315

Query: 210 ICGYCQIGN--VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           + GY    +  + +   +  +ML++G   N   +++L+++  + G +D+A+ +  +M+  
Sbjct: 316 LHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 375

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G+ PD VT++ +I  LC+  ++  A+  +N M    + P+   +G ++ G C        
Sbjct: 376 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNH------ 429

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT-FNSLIY 386
                                        G + +A +L  +++ K I P  V  F+S+I 
Sbjct: 430 -----------------------------GELVKAKELISEMMNKDIPPPGVKYFSSIIN 460

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             CK G+VA+ + ++D +   G  P+ VT+ + M  YC  GN++   ALL  M +  I P
Sbjct: 461 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 520

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
               Y  ++ G CK  ++ +A+ +  DM   GV P  + Y+ I+    + +    A ++ 
Sbjct: 521 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMF 580

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           ++M       +  TY +++ GLC N     A+ LL  L   N+    + +  +I A    
Sbjct: 581 HEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKV 640

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
           G   +A   F  +   G   +I+ Y+     MM++N
Sbjct: 641 GRRQEAKELFDAISTYGLVPNIQTYS-----MMITN 671



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 220/467 (47%), Gaps = 19/467 (4%)

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           + S P I TY +LI  Y ++   + GL +   +L  G   +  +YS L+    K G +D+
Sbjct: 94  RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 152

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A  L  EM   G+ P ++  + +I+ LCK  ++ KA  +  +M    I+P+ F +  I+ 
Sbjct: 153 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 212

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           GLC+ + + +A    + ++ +    + + YN +I GY   G   E+V++++Q+    + P
Sbjct: 213 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 272

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN--IQRLLA 434
           ++   NS I+   K+G+  +A+ + D++ L G +P  ++Y+T ++ Y    +  +  +  
Sbjct: 273 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 332

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +   M TK I P    + ++I    +   + +A+ + EDM   G+ PD +T+ T+I S C
Sbjct: 333 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 392

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           +   L  A    N M    + P+ A Y  LI G C +G+L  A  L+  +   +I    V
Sbjct: 393 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 452

Query: 555 AY-TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM------------- 598
            Y ++II   C EG V +       MV+ G   ++  +      +C+             
Sbjct: 453 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 512

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           M S G  P+  I   ++  + + G +     +   M+  G+ P   L
Sbjct: 513 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 559



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 124/525 (23%), Positives = 238/525 (45%), Gaps = 8/525 (1%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVYTNSIVIDGL 73
           V+ +M E   + +  TYNSL++    +  MW+    ++  +        V   +  I  L
Sbjct: 226 VLEQMVEAGTRPNSITYNSLIHGYSISG-MWNESVRVFKQMSSCGVIPTVDNCNSFIHAL 284

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK--GLFCLMLKYGLHP 131
            +  R  +A         K   P ++S + ++  Y     + +A    +F LML  G+ P
Sbjct: 285 FKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAP 344

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           +   +NILI+     G M++A+    DM   G+ PD +T++ +      + ++  A    
Sbjct: 345 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 404

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY-SVLLSSMCK 250
             ++  G  P    Y  LI G C  G + +  +L   M+++      + Y S +++++CK
Sbjct: 405 NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCK 464

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            GR+ E   ++  M   G +P++VT++ L+ G C    + +A  L + M S  I PN + 
Sbjct: 465 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 524

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +G ++ G C+   I +A   F  ++        VLY+I++ G  +      A +++ ++I
Sbjct: 525 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 584

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           E   + SI T+  ++ G C+N    +A  LL+ +    ++   +T+   ++A  + G  Q
Sbjct: 585 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 644

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L   + T  + P   TY+++I  L K+   +EA  L   +   G   D    N I+
Sbjct: 645 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 704

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
           R      ++ KA   L+ +  +NL   ++T ++L       G +K
Sbjct: 705 RMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIK 749



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 184/400 (46%), Gaps = 8/400 (2%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y+R GM+  A+ +   M+   +     T+ +++ +L    R  D +      + +
Sbjct: 351 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 410

Query: 57  SETPRN-VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVS-LNAIMSRYCKLGFA 114
              P   VY    +I G C    L  A   + E   K+  P  V   ++I++  CK G  
Sbjct: 411 GVPPSEAVY--GCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRV 468

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
              K +  +M++ G  P+  ++N L+ G C+ G+MEEA    + M   G+EP+   Y  L
Sbjct: 469 AEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTL 528

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G+    +I  A  V + +L KG  P  V Y++++ G  Q        K+   M+  G 
Sbjct: 529 VDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGT 588

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
            +++  Y V+L  +C++   DEA  LL ++ A+ +K D++T++I+I  + K  +  +A +
Sbjct: 589 TVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKE 648

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L++ + +  + PN   +  ++  L ++E   EA   F S+  S    D  L N ++   +
Sbjct: 649 LFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLL 708

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
               + +A      + E  ++    T + L   F + G +
Sbjct: 709 NKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI 748


>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
 gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
          Length = 900

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 235/497 (47%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS      ++  Y K G    A+  F  M   G+ P+AF +  L+H   +A  M  AL  
Sbjct: 261 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 320

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M   G+E   +TYSIL  GF  ++    A  + ++   K S  + + Y+ +I  +CQ
Sbjct: 321 VEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQ 380

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            GN+E   +L   M   G    +  Y  ++         ++ L +   ++  G KP +++
Sbjct: 381 SGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIIS 440

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y  L+    K  KV KA+ +  EM S  I  N+  +  ++ G         A   F+ ++
Sbjct: 441 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 500

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            S    D  +YN++I+ + K+GN+  A+ +  ++ ++R+ PS   F  +I G+   G + 
Sbjct: 501 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 560

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A   LD ++  G  P+ +TY   ++    +  +QR +++L +M    I P   TYT+++
Sbjct: 561 SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 620

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           +G      + +A +    +   G+  D   Y T++R+ CK   ++ A  +  +M    + 
Sbjct: 621 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 680

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
             +  YNILIDG    GD+  A+ L+  ++E  +      YT+ I A C  GD+ +A   
Sbjct: 681 RNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKV 740

Query: 576 FCQMVEKGFEISIRDYT 592
             +MV+ G + +++ YT
Sbjct: 741 IEEMVDVGLKPNVKTYT 757



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 139/555 (25%), Positives = 257/555 (46%), Gaps = 41/555 (7%)

Query: 3   AFVYSRTGMVH---------DAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDL 50
           AFV+  T +VH          A+  + +MK   L+++I TY+ L+     +  +    +L
Sbjct: 298 AFVF--TSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNL 355

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           + + K   +  N    S +I   CQ   ++ A   + E         +   +++M  Y  
Sbjct: 356 FKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTI 415

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           +        +F  + + G  P   SY  L++     G + +AL  + +M   G++ +  T
Sbjct: 416 IQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKT 475

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           YS+L  GF  L   + A+ + +++L  G  PD   Y +LI  +C++GN++  + + E M 
Sbjct: 476 YSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQ 535

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +  + +  A+  ++     +G +  AL  L  M   G  P ++TY+ LI GL ++ KV 
Sbjct: 536 KERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQ 595

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A+ + ++M    I+PN   +  I+ G      I +A  YF  +  S    DV +Y  ++
Sbjct: 596 RAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 655

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
               K G +  A+ + R++  ++I  +   +N LI G+ + G V +A  L+  +K  G+ 
Sbjct: 656 RACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVP 715

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+  TYT+++NA C+ G++QR   +++EM    + P   TYT +IKG  +      A++ 
Sbjct: 716 PNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKC 775

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCK----------------CK---------DLRKAFQL 505
            E+M + G+ PD+ +Y+ ++ S                   C+         DLR A   
Sbjct: 776 FEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVHW 835

Query: 506 LNQMWLHNLEPTSAT 520
               WLH +E T   
Sbjct: 836 --SRWLHKIERTGGA 848



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 139/582 (23%), Positives = 259/582 (44%), Gaps = 18/582 (3%)

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           +++++      N +  + ++        ++ A+  ++E   +    ++V+ + ++S + K
Sbjct: 286 FENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAK 345

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           +  ++ A  LF          +   Y+ +IH  C +G+ME A E   +M   G++     
Sbjct: 346 INDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDV 405

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y  +  G+ ++   +    V ++L   G  P I++Y  L+  Y +IG V + L + + M 
Sbjct: 406 YHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEME 465

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
           S G K N   YS+L++          A  +  EM   GL+PD   Y++LI   CK   + 
Sbjct: 466 SCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMD 525

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +AI +  +M  +R+ P++ A   I+ G      +  A    D +  S C+  V+ YN +I
Sbjct: 526 RAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALI 585

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
            G V+   +  AV +  ++    I+P+  T+  ++ G+  +G +  A      IK  GL+
Sbjct: 586 HGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLK 645

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
                Y T + A C+ G +Q  LA+ +EM  + I      Y ++I G  ++  + EA  L
Sbjct: 646 LDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDL 705

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC- 529
           ++ M   GV P+  TY + I + CK  D+++A +++ +M    L+P   TY  LI G   
Sbjct: 706 MKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWAR 765

Query: 530 VNGDLKNADCL----LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC-QMVEKGF 584
           V+   +   C     L  L+    S   +  + + +A   EG  +  +   C +M E   
Sbjct: 766 VSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDL 825

Query: 585 EISIR------------DYTKSFFCMMLSNGFPPDQEICEVM 614
            + +R            + T       L   FPPD    E +
Sbjct: 826 TVDLRTAVHWSRWLHKIERTGGALTEALQRIFPPDWNSLEFL 867



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/470 (22%), Positives = 207/470 (44%), Gaps = 15/470 (3%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W+ +     +   P    + ++I  Y + G+        E M ++G + N   ++ L+ +
Sbjct: 248 WQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHA 307

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
              +  +  AL  + EM++ GL+  +VTYSILI G  K +    A  L+ E  +K  S N
Sbjct: 308 YAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLN 367

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  I+   C+   +  A      +        + +Y+ M+ GY  + N  + + ++ 
Sbjct: 368 GIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFE 427

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           +L E    PSI+++  L+  + K GKVA A  +   ++  G++ +  TY+  +N +    
Sbjct: 428 RLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLH 487

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           +     A+ +EM    + P    Y ++I+  CK   +  A+ +LE M    + P    + 
Sbjct: 488 DFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFR 547

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            II  +    D++ A   L+ M      PT  TYN LI GL     ++ A  +L  +   
Sbjct: 548 PIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIA 607

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------------KSF 595
            I+  +  YT I++ + A GD+ KA  +F ++ E G ++ +  Y             +S 
Sbjct: 608 GITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSA 667

Query: 596 FCMMLSNGF---PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             +     F   P +  I  +++  + + GD+    +L   M + G+ P+
Sbjct: 668 LAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPN 717



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 133/292 (45%), Gaps = 3/292 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVS 57
           +L   + + G +  A+ ++ KM++  ++ S + +  ++        M    D  D ++ S
Sbjct: 513 LLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRS 572

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
                V T + +I GL ++ ++Q A+  L + +     P+  +   IM  Y   G    A
Sbjct: 573 GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKA 632

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              F  + + GL  D + Y  L+   C +G M+ AL  T +M    +  +   Y+IL  G
Sbjct: 633 FEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDG 692

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +     +  A  +++++   G  P+I TYT  I   C+ G+++   K+ E M+  G K N
Sbjct: 693 WARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPN 752

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           V  Y+ L+    +    D AL    EM+  GLKPD  +Y  L+  L  +  V
Sbjct: 753 VKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATV 804



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 145/304 (47%), Gaps = 40/304 (13%)

Query: 361 EAVQLYRQLIEKRI--------------SPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           EA + +R+++E R                PS   F  +I  + K G    AR   + ++ 
Sbjct: 232 EACREFRRVVESRPDNWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRA 291

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+EP+A  +T+ ++AY    +++  L+ ++EM+++ +  T VTY+++I G  K    Q 
Sbjct: 292 RGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQS 351

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A  L ++      + + I Y+ II + C+  ++ +A +L+ +M    ++     Y+ ++ 
Sbjct: 352 ADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMH 411

Query: 527 GLCVNGDLKNAD-CLLV--SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           G  +   ++N + CL+V   L+E     + ++Y  ++  +   G V KA++   +M   G
Sbjct: 412 GYTI---IQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCG 468

Query: 584 FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
            + + + Y+      ML NGF           I  H   D  + F +   M++SGL PD+
Sbjct: 469 IKHNNKTYS------MLINGF-----------IHLH---DFANAFAIFEEMLRSGLQPDR 508

Query: 644 FLIN 647
            + N
Sbjct: 509 AIYN 512


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 229/453 (50%), Gaps = 8/453 (1%)

Query: 81  DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF-AEVAKGLFCLMLKYGLHPDAFSYNIL 139
           DA L L  ++ +   P V   N ++   C+ G  A+ A+    ++   G    A +Y  L
Sbjct: 81  DAALRLVGSSPRP--PDVPLANRLVRDLCRRGRPADAAR----VVEACGPEATAATYGAL 134

Query: 140 IHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS 199
           + G C AG +E+A      M  H     A  ++ L        +++ A  V+  +L +G 
Sbjct: 135 VDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGC 194

Query: 200 DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALG 259
            PD+VTY +L+   C+     + L+L + M ++G + N + Y+V++ +MC+ G +D+A  
Sbjct: 195 APDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARE 254

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           LL  + + G KP+ V Y+ +++G C  ++   A ++ +EM  +   PN      I+  LC
Sbjct: 255 LLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLC 314

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
            K ++ +  +Y + +    C  +VV YN +I G  + GN+  A++L   +      P IV
Sbjct: 315 RKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIV 374

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T+N+++ G C   +  DA  L+  +  +   P   T+ T ++ +C++G I +   + ++M
Sbjct: 375 TYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQM 434

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
             K   P   TY+ +I GL K  K+++A++LL +M   G   D++ Y  +  S  K   +
Sbjct: 435 PEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKI 493

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            +  Q+++++    + P +  YN ++ GLC NG
Sbjct: 494 EEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNG 526



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 204/410 (49%), Gaps = 1/410 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           + Y ++ +I  LC++ R+ DA++ L     +   P VV+ N ++   CK      A  L 
Sbjct: 162 SAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELI 221

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   G  P+  +YN++I  +C  G +++A E  N +   G +P+ + Y+ + KGF  +
Sbjct: 222 DFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSI 281

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A +++ +++ +   P+  T  V+I   C+ G +++     E M   G   NV+ Y
Sbjct: 282 ERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTY 341

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + ++S MC+ G +D AL LL  M++ G KPD+VTY+ +++GLC  D+   A +L  +M  
Sbjct: 342 NAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQ 401

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               P++     I+   C+K +I +A   F  +    C  +   Y+ +I G  K G + +
Sbjct: 402 NDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQ 461

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A++L  ++  K  +   + +  L     K  K+ +  +++  ++  G+ P  V Y T + 
Sbjct: 462 ALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLL 520

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
             C  G     + +L +M +    P   TY ++I+GL  +   +EA +LL
Sbjct: 521 GLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELL 570



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/519 (24%), Positives = 226/519 (43%), Gaps = 59/519 (11%)

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LIH     G ++ AL     +G     PD    + L +      + + A +V++     G
Sbjct: 74  LIH----RGDLDAALRL---VGSSPRPPDVPLANRLVRDLCRRGRPADAARVVEAC---G 123

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
            +    TY  L+ GYC+ G +E+  ++   M +     +  A++ L+ ++C+ GR+ +AL
Sbjct: 124 PEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADAL 183

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            +L  M   G  PD+VTY+IL++  CK     +A++L                       
Sbjct: 184 VVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALEL----------------------- 220

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
                        D +    C  + V YN++ID   + G++ +A +L   L  +   P+ 
Sbjct: 221 ------------IDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNT 268

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           V +N+++ GFC   +  DA  +LD +      P+  T    +N  C +G +Q++   L++
Sbjct: 269 VNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEK 328

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M         VTY  VI G+C+Q  +  A++LL +M   G  PD +TYNT+++  C    
Sbjct: 329 MSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADR 388

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
              A +L+ +M  ++  P ++T+N +I   C  G +  A  +   + E   +     Y+T
Sbjct: 389 WEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYST 448

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEIS--IRDYTKSF------------FCMMLSNGF 604
           II      G + +A+    +M  KGF      R  T+S                +  +G 
Sbjct: 449 IIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGI 508

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
            P   +   +L+   + G      ++ A M+  G +PD+
Sbjct: 509 SPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDE 547



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 188/419 (44%), Gaps = 48/419 (11%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G V DA+ V+  M        + TYN LL      R      +L D ++      N  T 
Sbjct: 177 GRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTY 236

Query: 67  SIVIDGLCQQ-----------------------------------SRLQDAILFLQETAG 91
           +++ID +C++                                    R  DA   L E   
Sbjct: 237 NVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVR 296

Query: 92  KEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEE 151
           +   P+  +LN I++  C+ G  +        M K+G   +  +YN +I G+C  G+++ 
Sbjct: 297 ENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDS 356

Query: 152 ALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSD----PDIVTYT 207
           ALE  ++M   G +PD +TY+ + KG     +    W+  ++L+IK S     PD  T+ 
Sbjct: 357 ALELLSNMQSFGCKPDIVTYNTVLKGLCSADR----WEDAEELMIKMSQNDRLPDNSTFN 412

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            +I  +CQ G + +  ++ + M  +G   N   YS ++  + K+G++++AL LL EM   
Sbjct: 413 TIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANK 472

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G   D + Y +L   L K+DK+ + +Q+ +++    ISP +  +  +LLGLC       A
Sbjct: 473 GFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYA 531

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI-SPSIVTFNSLI 385
                 ++   C+ D   Y I+I+G    G   EA +L  +L  + + S S++   +L+
Sbjct: 532 IDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKNEALL 590



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 171/343 (49%), Gaps = 4/343 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           R G V  A  ++  +     K +   YN++L      +   D   + D++     P N  
Sbjct: 245 REGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEA 304

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +++I+ LC++  LQ   L+L++ +      +VV+ NA++S  C+ G  + A  L   M
Sbjct: 305 TLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNM 364

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
             +G  PD  +YN ++ GLC A   E+A E    M ++   PD  T++ +   +     I
Sbjct: 365 QSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLI 424

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A++V +++  KG +P+  TY+ +I G  + G +E+ L+L   M ++GF  + + Y VL
Sbjct: 425 LQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVL 483

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
             S+ K  +I+E + ++++++  G+ P  V Y+ ++ GLC+  K   AI +  +M S   
Sbjct: 484 TESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGC 543

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
            P+   +  ++ GL  +    EAR     L   + + + ++ N
Sbjct: 544 MPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKN 586


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 236/460 (51%), Gaps = 2/460 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRH-GVEP-DAITYSILAKGFHLL 181
           M + G  PD FSY IL+ GLC   + ++AL+  + M  H G  P D + Y+ +  G    
Sbjct: 161 MPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLRE 220

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            Q+  A+ +   +L +G  PD+VTY+ +I    +   +++  ++   M+  G   + I Y
Sbjct: 221 GQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMY 280

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+   C SG+  EA+G+  +M   G++PD+VTY+ L+  LCK  K  +A ++++ +  
Sbjct: 281 TSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVK 340

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +   P+S  +G +L G   +  + E     D ++         ++N+++  Y K   + E
Sbjct: 341 RGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDE 400

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+ ++  + ++ ++P IV + +++   C  G+V DA    +++K  GL P+ V +TT ++
Sbjct: 401 ALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIH 460

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C      ++  L  EM  + I    + +  ++  LCK+ ++ EA  L + M  IG+ P
Sbjct: 461 GLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEP 520

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           +  TYNT+I  +C    + +A +LL  M  + ++P+  TYN +I+G   NG +++   LL
Sbjct: 521 NTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLL 580

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
             +    ++   V Y  +++     G    A   + +M++
Sbjct: 581 REMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 242/502 (48%), Gaps = 9/502 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P++ +   ++    +LG  ++A      ++  GL      ++ L+ GLC      +A++ 
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDI 156

Query: 156 T-NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI----KGSDP-DIVTYTVL 209
               M   G +PD  +Y+IL KG   L     + + +  L I    KG  P D+V YT +
Sbjct: 157 VLRRMPELGCKPDLFSYTILLKG---LCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTV 213

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I G  + G +++   L + ML +G   +V+ YS ++S++ K+  +D+A  +   M   G+
Sbjct: 214 INGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGV 273

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            PD + Y+ L+ G C   K  +AI ++ +MC   + P+   + A++  LC+    TEAR 
Sbjct: 274 MPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARK 333

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
            FDSL+      D   Y  ++ GY   G + E   L   +++K +      FN ++  + 
Sbjct: 334 IFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYA 393

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K+ KV +A  +   ++  GL P  V Y T ++  C  G +   L+    ++++ + P  V
Sbjct: 394 KHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIV 453

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            +T +I GLC   K  +  +L  +M   G+  D I +N I+ + CK   + +A  L + M
Sbjct: 454 VFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLM 513

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               +EP + TYN LIDG C++G +  A  LL  +  + +  + V Y TII  +   G +
Sbjct: 514 VRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRI 573

Query: 570 HKAMTFFCQMVEKGFEISIRDY 591
              +T   +M  KG    I  Y
Sbjct: 574 EDGLTLLREMDGKGVNPGIVTY 595



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/509 (26%), Positives = 238/509 (46%), Gaps = 51/509 (10%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPR-- 61
           R G +  A   + ++    L++S   ++ LL  L    R +D M     DI +   P   
Sbjct: 111 RLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAM-----DIVLRRMPELG 165

Query: 62  ---NVYTNSIVIDGLCQQSRLQDAILFLQETAG-KEFGP-SVVSLNAIMSRYCKLGFAEV 116
              ++++ +I++ GLC     Q A+  L   A  K   P  VV+   +++   + G  + 
Sbjct: 166 CKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDK 225

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  ML  G  PD  +Y+ +I  L    +M++A +    M ++GV PD I Y+ L  
Sbjct: 226 AYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVH 285

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G+    +   A  + +K+   G +PD+VTYT L+   C+ G   E  K+ + ++ +G K 
Sbjct: 286 GYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKP 345

Query: 237 NVIAYSVLL-----------------------------------SSMCKSGRIDEALGLL 261
           +   Y  LL                                    +  K  ++DEAL + 
Sbjct: 346 DSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVF 405

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
             M   GL PD+V Y  ++  LC   +V  A+  +N + S+ ++PN      ++ GLC  
Sbjct: 406 SNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTC 465

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
           +   +       +I      D + +N ++    K G + EA  L+  ++   I P+  T+
Sbjct: 466 DKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTY 525

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           N+LI G+C +GK+ +A +LL  +  +G++PS VTY T +N Y + G I+  L LL+EM+ 
Sbjct: 526 NTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDG 585

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           K + P  VTY ++++GL +  +   A +L
Sbjct: 586 KGVNPGIVTYEMLLQGLFQAGRTVAAKEL 614



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/498 (21%), Positives = 205/498 (41%), Gaps = 84/498 (16%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P+I TY ++I    ++G ++        +++ G +++ I +S LL  +C   R  +A+ +
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDI 156

Query: 261 -LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
            L  M  +G KPDL +Y+IL++GLC      +A+ L + M   +                
Sbjct: 157 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHK---------------- 200

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
                              C  DVV Y  +I+G ++ G + +A  L+  ++++  SP +V
Sbjct: 201 -----------------GRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVV 243

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T++S+I    K   +  A ++   +  +G+ P  + YT+ ++ YC  G  +  + + ++M
Sbjct: 244 TYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKM 303

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY------------- 486
               + P  VTYT ++  LCK  K  EA ++ + +   G  PD  TY             
Sbjct: 304 CRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGAL 363

Query: 487 ----------------------NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
                                 N I+ ++ K   + +A  + + M    L P    Y  +
Sbjct: 364 VEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTV 423

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           +D LC  G + +A     SL+   ++   V +TT+I   C      K      +M+++G 
Sbjct: 424 LDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGI 483

Query: 585 EISIRDYT---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
            +    +                K+ F +M+  G  P+      ++  +   G +    +
Sbjct: 484 CLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMK 543

Query: 630 LAAVMIKSGLLPDKFLIN 647
           L  VM+ +G+ P     N
Sbjct: 544 LLGVMVFNGVKPSDVTYN 561



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 117/233 (50%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           ++++    + +++ +A+L       +   P +V+   ++   C  G  + A   F  +  
Sbjct: 386 NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKS 445

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            GL P+   +  LIHGLC     ++  E   +M   G+  D I ++ +        ++  
Sbjct: 446 EGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIE 505

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  +   ++  G +P+  TY  LI GYC  G ++E +KL  VM+  G K + + Y+ +++
Sbjct: 506 AKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIIN 565

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
              ++GRI++ L LL EM+  G+ P +VTY +L++GL +  +   A +LY  M
Sbjct: 566 GYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 618



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 136/306 (44%), Gaps = 23/306 (7%)

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           ++   ++  Y I+I    +LG +  A     ++I   +  S + F+ L+ G C   + +D
Sbjct: 93  TSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSD 152

Query: 397 ARRL-LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM-ETKAIGPTHV-TYTV 453
           A  + L  +   G +P   +YT  +   C++   Q+ L LL  M + K   P  V  YT 
Sbjct: 153 AMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTT 212

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           VI GL ++ +L +A  L + M   G +PD +TY++II +  K + + KA Q+  +M  + 
Sbjct: 213 VINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNG 272

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
           + P    Y  L+ G C +G  K A  +   +  H +    V YT ++   C  G   +A 
Sbjct: 273 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEAR 332

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             F  +V++G +                    PD      +L  +   G L  + +L  +
Sbjct: 333 KIFDSLVKRGHK--------------------PDSTTYGTLLHGYATEGALVEMHDLLDL 372

Query: 634 MIKSGL 639
           M+K G+
Sbjct: 373 MMKKGM 378


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/534 (26%), Positives = 256/534 (47%), Gaps = 12/534 (2%)

Query: 22  MKELDLKVSIQTYNSLLYNLRHTDIMW-----DLYDDIKVSETPRNVYTNSIVIDGLCQQ 76
           MK      ++ +Y+ L+    H D ++     +L  ++++     N  T    + GL + 
Sbjct: 200 MKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRT 259

Query: 77  SRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSY 136
            ++  A  FLQ    +    +    NA++  +C+ G  + A  +F  M K GL PD  SY
Sbjct: 260 RQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSY 319

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           +IL+ GLC  G +    +   +M R+G+ P  ++YS L  G     ++  A+++ ++L  
Sbjct: 320 SILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEE 379

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           +G   D + Y++++ G CQ  N+E    L   M+   F  +   Y+ L+ + C+   + +
Sbjct: 380 QGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTD 439

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           ALG+   M   G+ P++VT +IL+ G  K+  + +A    +++    I PN   +  I+ 
Sbjct: 440 ALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIIN 499

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           GLC+          F  +I    + D V+Y+I+ID +VK   + EA +L+ +++++   P
Sbjct: 500 GLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKP 559

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
           ++ T+ SLI G C + ++ +   L   +   GL P  + YT+ +  YC+  N++  L + 
Sbjct: 560 NVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIF 619

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKC 496
           + M    +      YT +I G  K   +  A  L+E+M   G+TP  +TY  +I  + K 
Sbjct: 620 RGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKI 679

Query: 497 KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
            D RKA    N M    + P +          C+ G   +AD    S +E ++S
Sbjct: 680 GDERKANMTYNSMLQAGITPDAKLS-------CILGFGNDADGFEDSREEKDVS 726



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 155/603 (25%), Positives = 261/603 (43%), Gaps = 56/603 (9%)

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           S T   VY   I I    + S  +DA+L    T  K+ G  +   N ++    +      
Sbjct: 137 SMTLLQVYATIIRI--FVELSMFEDALL--TYTEAKKVGVELQLCNFLLKCLVERNQIIY 192

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM--EEALEFTNDMGRHGVEPDAITYSIL 174
           A+ LF  M   G  P+ +SY++L+        +   EA E  ++M   GV+P+A TY   
Sbjct: 193 ARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTY 252

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G     Q++ AW  +Q L  +G+  +   +  +I G+C+ G V+E +++ + M   G 
Sbjct: 253 LYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGL 312

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
             +  +YS+L+  +CK G +     LL EM   G+ P LV+YS L+ GLC+  KV  A +
Sbjct: 313 VPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFE 372

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L+     +R+    F H                              D ++Y+I+++G  
Sbjct: 373 LF-----RRLEEQGFKH------------------------------DHIVYSIILNGCC 397

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           +  NI     L+  ++     P    + SLIY FC++  + DA  + + +   G+ P+ V
Sbjct: 398 QHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVV 457

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           T T  ++ + +E  I      L ++    I P    Y V+I GLCK  K      +  DM
Sbjct: 458 TCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADM 517

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G  PD + Y+ II SF K   L +AF+L ++M     +P   TY  LI+GLC +  L
Sbjct: 518 IKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRL 577

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-- 592
                L   +    ++  ++ YT++I  +C   ++  A+  F  M + G       YT  
Sbjct: 578 PEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCL 637

Query: 593 -------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
                        +     M + G  P       ++I + + GD          M+++G+
Sbjct: 638 IGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGI 697

Query: 640 LPD 642
            PD
Sbjct: 698 TPD 700



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 189/454 (41%), Gaps = 57/454 (12%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRI--DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQ 286
           M S G   NV +YSVL+S+     R+   EA  LL EME  G+KP+  TY   + GL + 
Sbjct: 200 MKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRT 259

Query: 287 DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLY 346
            +V  A      +C +    N++   A++ G C +  + EA   FD++     + D   Y
Sbjct: 260 RQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSY 319

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           +I++DG  K G++     L  ++    I+P++V+++SL++G C+ GKV  A  L   ++ 
Sbjct: 320 SILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEE 379

Query: 407 HGLE-----------------------------------PSAVTYTTFMNAYCEEGNIQR 431
            G +                                   P A  YT+ + A+C   N+  
Sbjct: 380 QGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTD 439

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            L + + M    + P  VT T+++ G  K+  + EA   L  +   G+ P+   Y  II 
Sbjct: 440 ALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIIN 499

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
             CK       + +   M      P +  Y+I+ID       L  A  L   + +     
Sbjct: 500 GLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKP 559

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEIC 611
               YT++I   C +  + + +T F  M+ +G                      PD+ + 
Sbjct: 560 NVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLT--------------------PDRILY 599

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
             +++ + +  ++ +  E+   M K GL  D FL
Sbjct: 600 TSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFL 633


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 231/490 (47%), Gaps = 18/490 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P++ + NA++    K      A  LF  ML+ GL P   +YN LI+     G++ +A E 
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + M    ++P+ +TY+ +         I  A ++   +   G  P+  TY VL+ G+CQ
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
             +V   + L + +L  G   N + ++ L+   CK+ R  EA G+  EM   G+ P +  
Sbjct: 269 RDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPV 328

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ L+ G  +     +A+ LY EM    + P+ F    ++ GLC+   +  A  +   + 
Sbjct: 329 YNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQ 388

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                 +   YN +ID Y ++GN+ EA+    ++ E  I P++V+++SLI G  K GK+ 
Sbjct: 389 EDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQ 448

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  +   +   G+EP+ VTYT  ++ + + G I     L +EM    I P  +T +V++
Sbjct: 449 IAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLV 508

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLC++ ++QEAV+ + +                  S  KC D+   F     +    L 
Sbjct: 509 DGLCRENRVQEAVRFVMEY-----------------SGLKCSDIHSVFSNFT-IEEECLI 550

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P S  Y  LI GL ++G    A  L   +++  +      YT +I+  C  G V  AM  
Sbjct: 551 PNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMML 610

Query: 576 FCQMVEKGFE 585
           +  M++ G +
Sbjct: 611 YADMMKIGVK 620



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 210/444 (47%), Gaps = 25/444 (5%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTN 66
           G V  A  V  +M    +  ++ TY +++  L     + D   L+D +K +    N YT 
Sbjct: 200 GTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTY 259

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           ++++ G CQ+  +  A++  QE       P+ V    ++  +CK      AKG+F  M +
Sbjct: 260 NVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPR 319

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           +G+ P    YN L+ G   +G+ +EAL    +M R G+ PD  T SI+ +G     Q+  
Sbjct: 320 FGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHV 379

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A + +Q +   G + +   Y  LI  YC+IGN+EE L     M   G + NV++YS L+ 
Sbjct: 380 ADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLID 439

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
              K G++  A+ +  EM A G++P++VTY+ LI G  K   +  A +L+ EM    ISP
Sbjct: 440 GHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISP 499

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV--VLYNIMIDGYVKLGNIGEAVQ 364
           N+     ++ GLC +  + EA  +        C  D+  V  N  I+             
Sbjct: 500 NAITVSVLVDGLCRENRVQEAVRFVMEYSGLKC-SDIHSVFSNFTIE------------- 545

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
                 E+ + P+ V + +LIYG   +G+  +A +L   ++  G+ P + TYT  +   C
Sbjct: 546 ------EECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQC 599

Query: 425 EEGNIQRLLALLQEMETKAIGPTH 448
             G +   + L  +M    + PT 
Sbjct: 600 MLGYVLNAMMLYADMMKIGVKPTR 623



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 190/380 (50%), Gaps = 11/380 (2%)

Query: 208 VLICGYCQIGNVEEGL----KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           VL+    Q+G ++E L    +LR +         + A + +L  + K+ R   A  L  E
Sbjct: 124 VLVIALSQMGLLDEALYVFRRLRTLPA-------LPACNAVLDGLVKARRPGCAWELFDE 176

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M   GL P +VTY+ LI     Q  V KA +++++M +++I PN   +  ++  LCE+  
Sbjct: 177 MLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGC 236

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           I +A   FD++  +    +   YN+++ G+ +  ++  AV LY++L++  ++P+ V F +
Sbjct: 237 IGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTT 296

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI GFCK  + ++A+ +   +   G+ P+   Y + M+     GN Q  LAL QEM    
Sbjct: 297 LIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLG 356

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           + P   T ++V++GLC   ++  A + L+ +   GV  +   YN +I  +C+  +L +A 
Sbjct: 357 LCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEAL 416

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
               +M    +EP   +Y+ LIDG    G ++ A  +   +    I    V YT +I  H
Sbjct: 417 ATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGH 476

Query: 564 CAEGDVHKAMTFFCQMVEKG 583
              G +  A     +M+E G
Sbjct: 477 AKNGGIDAAFRLHKEMIENG 496



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 229/541 (42%), Gaps = 99/541 (18%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           +L    S+ G++ +A++V  +++ L    +       L   R     W+L+D++      
Sbjct: 124 VLVIALSQMGLLDEALYVFRRLRTLPALPACNAVLDGLVKARRPGCAWELFDEMLRRGLV 183

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            +V T + +I+    Q  +  A     +   ++  P+VV+   ++   C+ G    A+ L
Sbjct: 184 PSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERL 243

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M + G+ P+ ++YN+L+ G C    +  A+    ++ + G+ P+A+ ++ L  GF  
Sbjct: 244 FDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCK 303

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML---------- 230
             + S A  +  ++   G  P +  Y  L+ G  + GN +E L L + M           
Sbjct: 304 AKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFT 363

Query: 231 -------------------------SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEME 265
                                      G  LN  AY+ L+   C+ G ++EAL     M 
Sbjct: 364 CSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMT 423

Query: 266 AVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
            VG++P++V+YS LI G  K+ K+  A+ +Y EM +K I PN                  
Sbjct: 424 EVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPN------------------ 465

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
                            VV Y  +I G+ K G I  A +L++++IE  ISP+ +T + L+
Sbjct: 466 -----------------VVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLV 508

Query: 386 YGFCKNGKVADARRLLD-----------------TIKLHGLEPSAVTYTTFM------NA 422
            G C+  +V +A R +                  TI+   L P++V Y T +        
Sbjct: 509 DGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQ 568

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           +CE G       L   M    + P   TYT++I+G C    +  A+ L  DM  IGV P 
Sbjct: 569 HCEAGK------LFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPT 622

Query: 483 Q 483
           +
Sbjct: 623 R 623


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 194/384 (50%)

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           P  F +N ++  L         +        +G+ PD  T SIL   F  L+ I+ A+ V
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
              +L +G  P+ +T   LI G C  G ++  L   + +++QGF+L+ ++Y  L++ +CK
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
           +G       LL ++E   +KPDLV Y+ +I  LCK   +  A  LY+EM  K ISPN F 
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +  ++ G C    + EA    + + + N   DV  +NI+ID   K G I EA+ L+ ++ 
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMK 298

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
            K + P+IVT+ SLI G CKN  +  A  L   +K  G++P+  +YT  ++A C+ G ++
Sbjct: 299 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLE 358

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
                 Q +  K       TY V+I GLCK     + + L   M   G  P+ IT+ TII
Sbjct: 359 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTII 418

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNL 514
            +  +  +  KA + L +M    L
Sbjct: 419 CALLEKDENDKAEKFLREMIARGL 442



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 188/394 (47%)

Query: 51  YDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCK 110
           ++ + +   P   +  + ++  L +  R    I   ++       P + +L+ +++ +C 
Sbjct: 49  FNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 108

Query: 111 LGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           L     A  +F  +LK G HP+A + N LI GLC  G ++ AL F + +   G + D ++
Sbjct: 109 LTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVS 168

Query: 171 YSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML 230
           Y  L  G     +     ++++KL      PD+V YT +I   C+   + +   L   M+
Sbjct: 169 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMI 228

Query: 231 SQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVH 290
            +G   NV  Y+ L+   C  G + EA  LL EM+   + PD+ T++ILI  L K+ K+ 
Sbjct: 229 VKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKID 288

Query: 291 KAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
           +A+ L+ EM  K + PN   + +++ GLC+   +  A      +       +V  Y I++
Sbjct: 289 EAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILL 348

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           D   K G +  A Q ++ L+ K    ++ T+N +I G CK G   D   L   ++  G  
Sbjct: 349 DALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCM 408

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           P+A+T+ T + A  E+    +    L+EM  + +
Sbjct: 409 PNAITFKTIICALLEKDENDKAEKFLREMIARGL 442



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 164/343 (47%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++ +LSS+ K+ R    + L  + E  G+ PDL T SILI   C    +  A  ++  + 
Sbjct: 64  FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANIL 123

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            +   PN+     ++ GLC    I  A  + D ++      D V Y  +I+G  K G   
Sbjct: 124 KRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETK 183

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
              +L R+L    + P +V + ++I+  CKN  + DA  L   + + G+ P+  TYTT +
Sbjct: 184 AVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLI 243

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + +C  GN++   +LL EM+ K I P   T+ ++I  L K+ K+ EA+ L E+M    + 
Sbjct: 244 HGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMF 303

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ +TY ++I   CK   L +A  L  +M    ++P   +Y IL+D LC  G L+NA   
Sbjct: 304 PNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQF 363

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
              L      L    Y  +I   C  G     M    +M  KG
Sbjct: 364 FQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKG 406



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 189/375 (50%), Gaps = 1/375 (0%)

Query: 35  NSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEF 94
           +SL+ N R+  ++  L+   + +    ++ T SI+I+  C  + +  A         + +
Sbjct: 69  SSLVKNKRYPTVI-SLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANILKRGY 127

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
            P+ ++LN ++   C  G  + A      ++  G   D  SY  LI+GLC AG  +    
Sbjct: 128 HPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVAR 187

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
               +  H V+PD + Y+ +         +  A  +  ++++KG  P++ TYT LI G+C
Sbjct: 188 LLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFC 247

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
            +GN++E   L   M  +    +V  +++L+ ++ K G+IDEA+ L  EM+   + P++V
Sbjct: 248 IMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIV 307

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+ LI GLCK   + +AI L  +M  + I PN +++  +L  LC+   +  A+ +F  L
Sbjct: 308 TYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHL 367

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           ++     +V  YN+MI+G  K G  G+ + L  ++  K   P+ +TF ++I    +  + 
Sbjct: 368 LVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDEN 427

Query: 395 ADARRLLDTIKLHGL 409
             A + L  +   GL
Sbjct: 428 DKAEKFLREMIARGL 442



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 174/366 (47%), Gaps = 15/366 (4%)

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A+  +N M   R  P +F    IL  L + +        F     +    D+   +I+I+
Sbjct: 45  AVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILIN 104

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
            +  L +I  A  ++  ++++   P+ +T N+LI G C  G++  A    D +   G + 
Sbjct: 105 CFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQL 164

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
             V+Y T +N  C+ G  + +  LL+++E  ++ P  V YT +I  LCK   L +A  L 
Sbjct: 165 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLY 224

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVN 531
            +M V G++P+  TY T+I  FC   +L++AF LLN+M L N+ P   T+NILID L   
Sbjct: 225 SEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKE 284

Query: 532 GDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           G +  A  L   ++  N+    V YT++I   C    + +A+    +M E+G + ++  Y
Sbjct: 285 GKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSY 344

Query: 592 T---------------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIK 636
           T               K FF  +L  G+  +     VM+    + G  G V +L + M  
Sbjct: 345 TILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEG 404

Query: 637 SGLLPD 642
            G +P+
Sbjct: 405 KGCMPN 410



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 168/331 (50%)

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  PD+ T ++LI  +C + ++     +   +L +G+  N I  + L+  +C  G I  A
Sbjct: 91  GITPDLCTLSILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRA 150

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
           L    ++ A G + D V+Y  LI GLCK  +     +L  ++    + P+   +  I+  
Sbjct: 151 LHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHC 210

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
           LC+ +++ +A   +  +I+     +V  Y  +I G+  +GN+ EA  L  ++  K I+P 
Sbjct: 211 LCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPD 270

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
           + TFN LI    K GK+ +A  L + +K   + P+ VTYT+ ++  C+  +++R +AL +
Sbjct: 271 VYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCK 330

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCK 497
           +M+ + I P   +YT+++  LCK  +L+ A Q  + + V G   +  TYN +I   CK  
Sbjct: 331 KMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAG 390

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
                  L ++M      P + T+  +I  L
Sbjct: 391 LFGDVMDLKSKMEGKGCMPNAITFKTIICAL 421



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 3/265 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           + G       ++ K++   +K  +  Y ++++ L    ++ D   LY ++ V     NV+
Sbjct: 178 KAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVF 237

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I G C    L++A   L E   K   P V + N ++    K G  + A  LF  M
Sbjct: 238 TYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
               + P+  +Y  LI GLC    +E A+     M   G++P+  +Y+IL        ++
Sbjct: 298 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRL 357

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +  Q LL+KG   ++ TY V+I G C+ G   + + L+  M  +G   N I +  +
Sbjct: 358 ENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTI 417

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGL 269
           + ++ +    D+A   L EM A GL
Sbjct: 418 ICALLEKDENDKAEKFLREMIARGL 442



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 32/192 (16%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           ++ G + +A+ +  +MK  ++  +I TY SL                             
Sbjct: 282 AKEGKIDEAMSLFEEMKHKNMFPNIVTYTSL----------------------------- 312

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
              IDGLC+   L+ AI   ++   +   P+V S   ++   CK G  E AK  F  +L 
Sbjct: 313 ---IDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLV 369

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G H +  +YN++I+GLC AG   + ++  + M   G  P+AIT+  +        +   
Sbjct: 370 KGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDK 429

Query: 187 AWKVIQKLLIKG 198
           A K +++++ +G
Sbjct: 430 AEKFLREMIARG 441


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 247/517 (47%), Gaps = 1/517 (0%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +ID  C +  + +A             P+V +   ++   C+ G    AK     +L   
Sbjct: 454 IIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIP 513

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
              D  ++N L+ G+C  G+++EAL+    M ++   PD  TY+IL  GF    +I  A 
Sbjct: 514 SAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPAL 573

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG-LKLREVMLSQGFKLNVIAYSVLLSS 247
            ++Q +L KG  PD V YT L+ G    G V+      +E++  +G   + IAY+ L++ 
Sbjct: 574 IMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNG 633

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
             K G I+    ++ +M    + P+  +Y+IL+ G  K  +  K++ LY  M  K I P+
Sbjct: 634 YLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPD 693

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           +  +  ++LGL E  +I  A  + + +++     D ++++I+I  + +   +  A+QL+ 
Sbjct: 694 NVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFN 753

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            +   R+SPS  T++++I G  +   +  +  +L  +   GL+P+   Y   +NA C  G
Sbjct: 754 CMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVG 813

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
            I R   L +EM+   I P  V  + +I+GLCK  KL+EAV +   M   G+ P   T+ 
Sbjct: 814 KIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFT 873

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           T++   CK   +  A  L   M    L+    +YN+LI GLC +  + +A  L   ++  
Sbjct: 874 TLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSK 933

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            +      Y T+  A  + G +         + E+G 
Sbjct: 934 GLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGL 970



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 163/661 (24%), Positives = 288/661 (43%), Gaps = 88/661 (13%)

Query: 9   TGMVHDAVFVIAKMKELDLKVSIQTYNSLLY----NLRHTDIMWDLYDDIKVSETPRNVY 64
            G    A  ++ KMK   L  S+ TYN++L+      R    +  L +D++    P ++Y
Sbjct: 236 NGEFRKAEDMLQKMKTCRLSNSV-TYNTILHWYVKKGRFKAALCVL-EDMERDSIPADIY 293

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I+ID LC+  R   A L L+     +  P   + N +++ +   G    A  +F  M
Sbjct: 294 TYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHM 353

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L+    P   +Y  +I G C    +++AL   ++M   GV P               S+I
Sbjct: 354 LRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMP---------------SEI 398

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLI----------------------------C---GY 213
           S A ++++ +L  G DPDIVTY+ LI                            C    Y
Sbjct: 399 SKAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFRQYMSRMKISFDSVSFNCIIDSY 458

Query: 214 CQIGNVEEGLKLREVMLSQGFKLNVIAY-------------------------------- 241
           C  GN+ E   + + M+  G   NV  Y                                
Sbjct: 459 CHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDE 518

Query: 242 ---SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
              + LL  +CK G +DEAL L  +M      PD+ TY+IL+ G C++ K+  A+ +   
Sbjct: 519 KTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQM 578

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-QDVVLYNIMIDGYVKLG 357
           M  K + P++ A+  +L GL  +  +  A   F  +I    +  D + YN +++GY+K G
Sbjct: 579 MLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGG 638

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           NI    ++   + +  + P+  ++N L++G+ K G+ + +  L   +   G+ P  VTY 
Sbjct: 639 NINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYR 698

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +    E G I   +  L++M  + I P  + + ++I    ++ K+  A+QL   M  +
Sbjct: 699 LLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWL 758

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
            ++P   TY+ +I    +   L ++ ++L +M    L+P    Y  L++  C  G +  A
Sbjct: 759 RMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRA 818

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             L   ++   I    VA ++II+  C  G + +A+  F  M+  G   ++  +T    C
Sbjct: 819 FRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHC 878

Query: 598 M 598
           +
Sbjct: 879 L 879



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 154/639 (24%), Positives = 286/639 (44%), Gaps = 69/639 (10%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLY------NLRHTDIMWDLYDDIKVSETPRNVYTNSI 68
           A  ++ +M++ DL     TYN+L+        + H   +++    ++ +  P +V T + 
Sbjct: 311 AFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHM--LRQTFVP-SVATYTT 367

Query: 69  VIDGLCQQSRLQDAILFLQE-----------TAGKEF---------GPSVVSLNAIMSRY 108
           +IDG C+  R+  A+  L E           +  K+           P +V+ +A+++  
Sbjct: 368 MIDGYCRNRRIDKALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALINE- 426

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
              G    A+     M +  +  D+ S+N +I   C  G++ EA    + M R+G  P+ 
Sbjct: 427 ---GMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNV 483

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
            TY  L +G      +  A + +  LL   S  D  T+  L+ G C+ G ++E L L E 
Sbjct: 484 CTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEK 543

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M+      ++  Y++LLS  C+ G+I  AL +L  M   G+ PD V Y+ L+ GL  + +
Sbjct: 544 MVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQ 603

Query: 289 VHKAIQLYNEM-CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           V  A  ++ E+ C + +  +  A+ +++ G  +   I   +     +  S    +   YN
Sbjct: 604 VKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYN 663

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG-------------------- 387
           I++ GYVK G   +++ LY+ ++ K I P  VT+  LI G                    
Sbjct: 664 ILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLE 723

Query: 388 ---------------FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
                          F +  K+ +A +L + +K   + PS+ TY+  +N    +  + + 
Sbjct: 724 GIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQS 783

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
             +L+EM    + P H  Y  ++   C+  K+  A +L E+M  +G+ P  +  ++IIR 
Sbjct: 784 HEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRG 843

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            CKC  L +A  + + M    + PT AT+  L+  LC    + +A  L   ++   + + 
Sbjct: 844 LCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVD 903

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
            V+Y  +I   C +  +  A+  + +M  KG   ++  Y
Sbjct: 904 VVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTY 942



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 142/547 (25%), Positives = 251/547 (45%), Gaps = 41/547 (7%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDD-IKVSETPRNVYT 65
           GM+ +A      M  + +     ++N ++ +  H   +   + +YD  ++   +P NV T
Sbjct: 427 GMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSP-NVCT 485

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
              ++ GLCQ   L  A  F+             + NA++   CK G  + A  L   M+
Sbjct: 486 YQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMV 545

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           K    PD  +Y IL+ G C  G +  AL     M   GV PD + Y+ L  G     Q+ 
Sbjct: 546 KNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVK 605

Query: 186 GAWKVIQKLL-------------------IKGSD-----------------PDIVTYTVL 209
            A  V Q+++                   +KG +                 P+  +Y +L
Sbjct: 606 AASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNIL 665

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + GY + G   + L L + M+ +G + + + Y +L+  + + G ID A+  L +M   G+
Sbjct: 666 MHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGI 725

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            PD + + ILI    ++ K+H A+QL+N M   R+SP+S  + A++ GL  K  + ++  
Sbjct: 726 FPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHE 785

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
               ++      +   Y  +++   ++G I  A +L  ++    I P+ V  +S+I G C
Sbjct: 786 VLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLC 845

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K GK+ +A  +  T+   G+ P+  T+TT M+  C+E  I   L L + ME+  +    V
Sbjct: 846 KCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVV 905

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           +Y V+I GLCK  ++ +A+ L E+M   G+ P+  TY T+  +      ++   +LL  +
Sbjct: 906 SYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDI 965

Query: 510 WLHNLEP 516
               L P
Sbjct: 966 EERGLIP 972



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 142/606 (23%), Positives = 263/606 (43%), Gaps = 53/606 (8%)

Query: 52  DDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKL 111
           DD     +P  +  N+I +  L +Q   +   LFL+E+    F   V + N +++  C  
Sbjct: 180 DDCGFKASP--IACNTI-LRALVEQGESKYVWLFLRESLAHNFPLDVTTCNILLNSLCTN 236

Query: 112 GFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY 171
           G    A+ +   M    L  ++ +YN ++H     G  + AL    DM R  +  D  TY
Sbjct: 237 GEFRKAEDMLQKMKTCRL-SNSVTYNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTY 295

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           +I+      + + + A+ +++++      PD  TY  LI G+   G +     +   ML 
Sbjct: 296 NIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLR 355

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           Q F  +V  Y+ ++   C++ RID+AL +L EM+  G+ P                ++ K
Sbjct: 356 QTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMP---------------SEISK 400

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A Q+   M    I P+   + A++     + MITEA  +   +       D V +N +ID
Sbjct: 401 AKQILKSMLEDGIDPDIVTYSALI----NEGMITEAEHFRQYMSRMKISFDSVSFNCIID 456

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARR----LLDTIKLH 407
            Y   GNI EA  +Y  ++    SP++ T+ +L+ G C+ G +  A++    LLD     
Sbjct: 457 SYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDI---- 512

Query: 408 GLEPSAV---TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              PSA+   T+   +   C+ G +   L L ++M      P   TYT+++ G C++ K+
Sbjct: 513 ---PSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKI 569

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL-HNLEPTSATYNI 523
             A+ +L+ M   GV PD + Y  ++        ++ A  +  ++     L      YN 
Sbjct: 570 LPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNS 629

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           L++G    G++     ++  + +  +     +Y  ++  +   G   K++  +  MV KG
Sbjct: 630 LMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKG 689

Query: 584 F---------------EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
                           E  + D    F   M+  G  PD+ + ++++ AF +   + +  
Sbjct: 690 IRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNAL 749

Query: 629 ELAAVM 634
           +L   M
Sbjct: 750 QLFNCM 755



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 180/454 (39%), Gaps = 70/454 (15%)

Query: 204 VTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYE 263
           V + +L+  Y +   V +       M   GFK + IA + +L ++ + G        L E
Sbjct: 154 VVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRE 213

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
             A     D+ T +IL+  LC   +  KA  +  +M + R+S                  
Sbjct: 214 SLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRLS------------------ 255

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
                             + V YN ++  YVK G    A+ +   +    I   I T+N 
Sbjct: 256 ------------------NSVTYNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNI 297

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           +I   C+  + A A  LL  ++   L P   TY T +N +  EG I     +   M  + 
Sbjct: 298 MIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQT 357

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
             P+  TYT +I G C+  ++ +A+ +L +M + GV P +I+               KA 
Sbjct: 358 FVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEIS---------------KAK 402

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           Q+L  M    ++P   TY+ LI+     G +  A+     +    IS   V++  II ++
Sbjct: 403 QILKSMLEDGIDPDIVTYSALIN----EGMITEAEHFRQYMSRMKISFDSVSFNCIIDSY 458

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDY---------------TKSFFCMMLSNGFPPDQ 608
           C  G++ +A T +  MV  G   ++  Y                K F   +L      D+
Sbjct: 459 CHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDE 518

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +    +L+   + G L    +L   M+K+  LPD
Sbjct: 519 KTFNALLLGICKYGTLDEALDLCEKMVKNNCLPD 552



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 113/238 (47%), Gaps = 5/238 (2%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKV 56
           +L   +S    +H+A+ +   MK L +  S +TY++++  L   + +      L + ++V
Sbjct: 734 ILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQV 793

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
              P + +  ++V +  C+  ++  A    +E       P+ V+ ++I+   CK G  E 
Sbjct: 794 GLQPNHTHYIALV-NAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEE 852

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  +F  M++ G+ P   ++  L+H LC    + +AL     M    ++ D ++Y++L  
Sbjct: 853 AVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLIT 912

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
           G     +IS A  + +++  KG  P++ TY  L       G ++ G +L E +  +G 
Sbjct: 913 GLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGL 970


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/581 (24%), Positives = 279/581 (48%), Gaps = 6/581 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSE 58
           L + + + G V  A  +  +M E  +   I   NS++  L   +  D    +   +  S 
Sbjct: 196 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 255

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              +++T S++IDGLC+   +  A   L++       P+ ++ N+++  Y   G    + 
Sbjct: 256 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 315

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
            +F  M   G+ P   + N  IH L   G   EA    + M   G +PD I+YS +  G+
Sbjct: 316 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 375

Query: 179 HLLSQ--ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
              +   ++    +   +L KG  P+   + +LI  Y + G +++ + + E M ++G   
Sbjct: 376 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 435

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + + ++ ++SS+C+ GR+D+AL     M  +G+ P    Y  LI+G C   ++ KA +L 
Sbjct: 436 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 495

Query: 297 NEMCSKRISPNSFAH-GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
           +EM +K I P    +  +I+  LC++  + E +   D ++ +    +VV +N +++GY  
Sbjct: 496 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 555

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +GN+ EA  L   +    I P+   + +L+ G+CKNG++ DA  +   +   G++P++V 
Sbjct: 556 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 615

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y+  ++   +         +  EM       +  TY VV+ GLC+     EA  LLE ++
Sbjct: 616 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 675

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLK 535
            + V  D IT+N +I +  K    ++A +L + +  + L P   TY+++I  L      +
Sbjct: 676 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 735

Query: 536 NADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
            AD L +S+++   +        I++    + +V KA  + 
Sbjct: 736 EADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYL 776



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 245/499 (49%), Gaps = 4/499 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P++ + N ++  Y ++   ++   +   +LK GL PD FSY+ LI+G    G +++A   
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 212

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M   GV P  +  + + K    + ++  A  ++QK++  G  PD+ TY+++I G C+
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
              +++  ++ E M+  G + N I Y+ L+     SG  +E++ +  +M + G+ P +  
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG--LCEKEMITEARMYFDS 333
            +  I  L K  + ++A  +++ M  K   P+  ++  +L G        + +    F+ 
Sbjct: 333 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 392

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           ++      +  ++NI+I+ Y + G + +A+ ++  +  K + P  VTF ++I   C+ G+
Sbjct: 393 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 452

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY-T 452
           + DA    + +   G+ PS   Y   +   C  G + +   L+ EM  K I P  V Y +
Sbjct: 453 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 512

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            +I  LCK+ ++ E   +++ M   G  P+ +T+N+++  +C   ++ +AF LL+ M   
Sbjct: 513 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 572

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
            +EP    Y  L+DG C NG + +A  +   +    +  T V Y+ I+           A
Sbjct: 573 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 632

Query: 573 MTFFCQMVEKGFEISIRDY 591
              F +M+E G  +SI  Y
Sbjct: 633 KKMFHEMIESGTTVSIHTY 651



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/576 (23%), Positives = 254/576 (44%), Gaps = 86/576 (14%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I G  +   +  A     E   +   P ++  N+I+   CK+   + A+ +   M+  G
Sbjct: 196 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 255

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + PD F+Y+++I GLC + +M++A      M   G  P++ITY+ L  G+     ISG W
Sbjct: 256 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGY----SISGMW 311

Query: 189 K---------------------------------------VIQKLLIKGSDPDIVTYTVL 209
                                                   +   +++KG  PDI++Y+ +
Sbjct: 312 NESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTM 371

Query: 210 ICGYCQIGN--VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           + GY    +  + +   +  +ML++G   N   +++L+++  + G +D+A+ +  +M+  
Sbjct: 372 LHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 431

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G+ PD VT++ +I  LC+  ++  A+  +N M    + P+   +G ++ G C        
Sbjct: 432 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNH------ 485

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT-FNSLIY 386
                                        G + +A +L  +++ K I P  V  F+S+I 
Sbjct: 486 -----------------------------GELVKAKELISEMMNKDIPPPGVKYFSSIIN 516

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             CK G+VA+ + ++D +   G  P+ VT+ + M  YC  GN++   ALL  M +  I P
Sbjct: 517 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 576

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
               Y  ++ G CK  ++ +A+ +  DM   GV P  + Y+ I+    + +    A ++ 
Sbjct: 577 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMF 636

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           ++M       +  TY +++ GLC N     A+ LL  L   N+    + +  +I A    
Sbjct: 637 HEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKV 696

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN 602
           G   +A   F  +   G   +I+ Y+     MM++N
Sbjct: 697 GRRQEAKELFDAISTYGLVPNIQTYS-----MMITN 727



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 220/467 (47%), Gaps = 19/467 (4%)

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
           + S P I TY +LI  Y ++   + GL +   +L  G   +  +YS L+    K G +D+
Sbjct: 150 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDK 208

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A  L  EM   G+ P ++  + +I+ LCK  ++ KA  +  +M    I+P+ F +  I+ 
Sbjct: 209 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 268

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISP 376
           GLC+ + + +A    + ++ +    + + YN +I GY   G   E+V++++Q+    + P
Sbjct: 269 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 328

Query: 377 SIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN--IQRLLA 434
           ++   NS I+   K+G+  +A+ + D++ L G +P  ++Y+T ++ Y    +  +  +  
Sbjct: 329 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 388

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +   M TK I P    + ++I    +   + +A+ + EDM   G+ PD +T+ T+I S C
Sbjct: 389 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 448

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           +   L  A    N M    + P+ A Y  LI G C +G+L  A  L+  +   +I    V
Sbjct: 449 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 508

Query: 555 AY-TTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFCM------------- 598
            Y ++II   C EG V +       MV+ G   ++  +      +C+             
Sbjct: 509 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 568

Query: 599 MLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           M S G  P+  I   ++  + + G +     +   M+  G+ P   L
Sbjct: 569 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 615



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 235/514 (45%), Gaps = 8/514 (1%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD----LYDDIKVSETPRNVYTNSIVIDGL 73
           V+ +M E   + +  TYNSL++    +  MW+    ++  +        V   +  I  L
Sbjct: 282 VLEQMVEAGTRPNSITYNSLIHGYSISG-MWNESVRVFKQMSSCGVIPTVDNCNSFIHAL 340

Query: 74  CQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK--GLFCLMLKYGLHP 131
            +  R  +A         K   P ++S + ++  Y     + +A    +F LML  G+ P
Sbjct: 341 FKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAP 400

Query: 132 DAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVI 191
           +   +NILI+     G M++A+    DM   G+ PD +T++ +      + ++  A    
Sbjct: 401 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 460

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY-SVLLSSMCK 250
             ++  G  P    Y  LI G C  G + +  +L   M+++      + Y S +++++CK
Sbjct: 461 NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCK 520

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFA 310
            GR+ E   ++  M   G +P++VT++ L+ G C    + +A  L + M S  I PN + 
Sbjct: 521 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 580

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
           +G ++ G C+   I +A   F  ++        VLY+I++ G  +      A +++ ++I
Sbjct: 581 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 640

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ 430
           E   + SI T+  ++ G C+N    +A  LL+ +    ++   +T+   ++A  + G  Q
Sbjct: 641 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 700

Query: 431 RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L   + T  + P   TY+++I  L K+   +EA  L   +   G   D    N I+
Sbjct: 701 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 760

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           R      ++ KA   L+ +  +NL   ++T ++L
Sbjct: 761 RMLLNKAEVAKASNYLSIIGENNLTLEASTISLL 794



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 184/400 (46%), Gaps = 8/400 (2%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKV 56
           +L   Y+R GM+  A+ +   M+   +     T+ +++ +L    R  D +      + +
Sbjct: 407 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 466

Query: 57  SETPRN-VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVS-LNAIMSRYCKLGFA 114
              P   VY    +I G C    L  A   + E   K+  P  V   ++I++  CK G  
Sbjct: 467 GVPPSEAVY--GCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRV 524

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
              K +  +M++ G  P+  ++N L+ G C+ G+MEEA    + M   G+EP+   Y  L
Sbjct: 525 AEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTL 584

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
             G+    +I  A  V + +L KG  P  V Y++++ G  Q        K+   M+  G 
Sbjct: 585 VDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGT 644

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
            +++  Y V+L  +C++   DEA  LL ++ A+ +K D++T++I+I  + K  +  +A +
Sbjct: 645 TVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKE 704

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L++ + +  + PN   +  ++  L ++E   EA   F S+  S    D  L N ++   +
Sbjct: 705 LFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLL 764

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
               + +A      + E  ++    T + L   F + G +
Sbjct: 765 NKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI 804


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 226/460 (49%), Gaps = 16/460 (3%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           + S N ++  +C       A   F  + K G HP   ++N L+HGLC+   + EAL+  +
Sbjct: 15  IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            M     +P+ +T++ L  G     ++  A  ++ +++  G  P+ +TY  ++ G C++G
Sbjct: 75  QM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 218 NVEEGLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           +    L L R++      K +V+ YS ++  + K GR  +A  L  EM+  G+ PD+VTY
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           S +I G C   K  +A +L  EM  ++ISP+      ++  L ++  +  A+     +I 
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR-----------ISPSIVTFNSLI 385
           S    +VV  N ++DG    G + +A+++++ + +             + P + T+N LI
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G    GK  +A  L + +   G+ P  VTY++ +N  C++  +     +   M +K+  
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  VT+  +I G CK   + + ++L  +M   G+  + ITY T+IR F K  ++  +  +
Sbjct: 371 PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDI 430

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
             +M    + P + T   ++ GL    +LK A  +L  LQ
Sbjct: 431 FQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 231/466 (49%), Gaps = 16/466 (3%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           + P ++Y+ +I+I   C  S+L  A+    +     F P++V+ N ++   C       A
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             LF  M K    P+  ++  L++GLC  G + EA+   + M   G++P+ ITY  +  G
Sbjct: 70  LDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 178 FHLLSQISGAWKVIQKLL-IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
              +     A  +++K+  +    PD+V Y+ +I G  + G   +   L   M  +G   
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +++ YS +++  C SG+  EA  LL EM    + PD+VT+S LI  L K+  ++ A  L 
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS----------NCIQ-DVVL 345
            EM S  + PN      +L GLC+   + +A   F ++  S          N ++ DV  
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQT 305

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YNI+I G +  G   EA +LY ++  + I P  VT++S+I G CK  ++ +A ++ D++ 
Sbjct: 306 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMG 365

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
                P+ VT+ T +  YC+ G +   L L  EM  + I    +TY  +I+G  K   + 
Sbjct: 366 SKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNIN 425

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            ++ + ++M   GV PD IT   ++      ++L+KA  +L ++ +
Sbjct: 426 GSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQM 471



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 224/447 (50%), Gaps = 21/447 (4%)

Query: 161 RHGVE-P-DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           +HG++ P D  +++IL K F   S++  A     KL   G  P +VT+  L+ G C    
Sbjct: 6   KHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDR 65

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           V E L L      Q  K NV+ ++ L++ +C+ GR+ EA+ LL  M   GL+P+ +TY  
Sbjct: 66  VSEALDL----FHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 121

Query: 279 LIRGLCKQDKVHKAIQLYNEMCS-KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           ++ G+CK      A+ L  +M     I P+   + AI+ GL +    T+A+  F  +   
Sbjct: 122 IVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK 181

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
               D+V Y+ MI+G+   G   EA +L ++++ ++ISP +VTF+ LI    K G +  A
Sbjct: 182 GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSA 241

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET-----------KAIGP 446
           + LL  +   G+ P+ VT  T ++  C+ G ++  L + + M+              + P
Sbjct: 242 QDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEP 301

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              TY ++I GL  + K  EA +L E+M   G+ PD +TY+++I   CK   L +A Q+ 
Sbjct: 302 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMF 361

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           + M   +  P   T+N LI G C  G + +   L   +    I    + Y T+I+     
Sbjct: 362 DSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKV 421

Query: 567 GDVHKAMTFFCQMVEKGF---EISIRD 590
           G+++ ++  F +M+  G     I+IR+
Sbjct: 422 GNINGSLDIFQEMISSGVYPDTITIRN 448



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 224/457 (49%), Gaps = 36/457 (7%)

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           DI ++ +LI  +C    +   L     +   GF   ++ ++ LL  +C   R+ EAL L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE- 320
           ++M     KP++VT++ L+ GLC++ +V +A+ L + M    + PN   +G I+ G+C+ 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
            + ++   +      +S+   DVV+Y+ +IDG  K G   +A  L+ ++ +K I P IVT
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           ++ +I GFC +GK ++A+RLL  + +  + P  VT++  +NA  +EG++     LLQEM 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY-----------VIGVTPDQITYNTI 489
           +  + P  VT   ++ GLC   KL++A+++ + M              GV PD  TYN +
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I          +A +L  +M    + P + TY+ +I+GLC    L  A  +  S+   + 
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
           S   V + T+I  +C  G V   +  FC+M  +G   +   Y                  
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYI----------------- 412

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
               ++  F + G++    ++   MI SG+ PD   I
Sbjct: 413 ---TLIRGFRKVGNINGSLDIFQEMISSGVYPDTITI 446



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 226/438 (51%), Gaps = 13/438 (2%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           A+    K+ +L    ++ T+N+LL+ L   D + +  D       P NV T + +++GLC
Sbjct: 34  ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKP-NVVTFTTLMNGLC 92

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LHPDA 133
           ++ R+ +A+  L         P+ ++   I+   CK+G    A  L   M +   + PD 
Sbjct: 93  REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDV 152

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
             Y+ +I GL   G   +A     +M   G+ PD +TYS +  GF    + S A +++Q+
Sbjct: 153 VIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQE 212

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +L++   PD+VT++ LI    + G++     L + M+S G   NV+  + LL  +C SG+
Sbjct: 213 MLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGK 272

Query: 254 IDEALGLLYEMEAV-----------GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           + +AL +   M+             G++PD+ TY+ILI GL  + K  +A +LY EM  +
Sbjct: 273 LKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 332

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I P++  + +++ GLC++  + EA   FDS+   +   ++V +N +I GY K G + + 
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDG 392

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++L+ ++  + I  + +T+ +LI GF K G +  +  +   +   G+ P  +T    +  
Sbjct: 393 LELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTG 452

Query: 423 YCEEGNIQRLLALLQEME 440
              +  +++ LA+L+E++
Sbjct: 453 LWSKEELKKALAMLEELQ 470



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 181/346 (52%), Gaps = 17/346 (4%)

Query: 8   RTGMVHDAVFVIAKMKELD-LKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRN 62
           + G    A+ ++ KM+EL  +K  +  Y++++  L    RHTD   +L+ +++      +
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQ-NLFIEMQDKGIFPD 186

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T S +I+G C   +  +A   LQE   ++  P VV+ + +++   K G    A+ L  
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR-----------HGVEPDAITY 171
            M+  G+ P+  + N L+ GLC +G +++ALE    M +           +GVEPD  TY
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           +IL  G     +   A ++ +++  +G  PD VTY+ +I G C+   ++E  ++ + M S
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           + F  N++ ++ L++  CK+G +D+ L L  EM   G+  + +TY  LIRG  K   ++ 
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           ++ ++ EM S  + P++     +L GL  KE + +A    + L MS
Sbjct: 427 SLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMS 472



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 124/271 (45%), Gaps = 25/271 (9%)

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
           +I   I +FN LI  FC   K+  A      +   G  P+ VT+ T ++  C E  +   
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L L  +M      P  VT+T ++ GLC++ ++ EAV LL+ M   G+ P+QITY TI+  
Sbjct: 70  LDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 493 FCKCKDLRKAFQLLNQMW-LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            CK  D   A  LL +M  L +++P    Y+ +IDGL  +G   +A  L + +Q+  I  
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEIC 611
             V Y+ +I   C+ G   +A     +M                    L     PD    
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEM--------------------LVRKISPDVVTF 225

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             ++ A  + GDL S  +L   MI SG+ P+
Sbjct: 226 SGLINALVKEGDLNSAQDLLQEMISSGVCPN 256


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 226/460 (49%), Gaps = 16/460 (3%)

Query: 98  VVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTN 157
           + S N ++  +C       A   F  + K G HP   ++N L+HGLC+   + EAL+  +
Sbjct: 15  IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74

Query: 158 DMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIG 217
            M     +P+ +T++ L  G     ++  A  ++ +++  G  P+ +TY  ++ G C++G
Sbjct: 75  QM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 218 NVEEGLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           +    L L R++      K +V+ YS ++  + K GR  +A  L  EM+  G+ PD+VTY
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           S +I G C   K  +A +L  EM  ++ISP+      ++  L ++  +  A+     +I 
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR-----------ISPSIVTFNSLI 385
           S    +VV  N ++DG    G + +A+++++ + +             + P + T+N LI
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
            G    GK  +A  L + +   G+ P  VTY++ +N  C++  +     +   M +K+  
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370

Query: 446 PTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
           P  VT+  +I G CK   + + ++L  +M   G+  + ITY T+IR F K  ++  +  +
Sbjct: 371 PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDI 430

Query: 506 LNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
             +M    + P + T   ++ GL    +LK A  +L  LQ
Sbjct: 431 FQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 224/447 (50%), Gaps = 21/447 (4%)

Query: 161 RHGVE-P-DAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           +HG++ P D  +++IL K F   S++  A     KL   G  P +VT+  L+ G C    
Sbjct: 6   KHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDR 65

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           V E L L      Q  K NV+ ++ L++ +C+ GR+ EA+ LL  M   GL+P+ +TY  
Sbjct: 66  VSEALDL----FHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 121

Query: 279 LIRGLCKQDKVHKAIQLYNEMCS-KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           ++ G+CK      A+ L  +M     I P+   + AI+ GL +    T+A+  F  +   
Sbjct: 122 IVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK 181

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
               D+V Y+ MI+G+   G   EA +L ++++ ++ISP +VTF+ LI    K G +  A
Sbjct: 182 GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSA 241

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET-----------KAIGP 446
           + LL  +   G+ P+ VT  T ++  C+ G ++  L + + M+              + P
Sbjct: 242 QDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEP 301

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
              TY ++I GL  + K  EA +L E+M   G+ PD +TY+++I   CK   L +A Q+ 
Sbjct: 302 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMF 361

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           + M   +  P   T+N LI G C  G + +   L   +    I    + Y T+I+     
Sbjct: 362 DSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKV 421

Query: 567 GDVHKAMTFFCQMVEKGF---EISIRD 590
           G+++ ++  F +M+  G     I+IR+
Sbjct: 422 GNINGSLDIFQEMISSGVYPDTITIRN 448



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 231/466 (49%), Gaps = 16/466 (3%)

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
           + P ++Y+ +I+I   C  S+L  A+    +     F P++V+ N ++   C       A
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             LF  M K    P+  ++  L++GLC  G + EA+   + M   G++P+ ITY  +  G
Sbjct: 70  LDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 178 FHLLSQISGAWKVIQKLL-IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
              +     A  +++K+  +    PD+V Y+ +I G  + G   +   L   M  +G   
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +++ YS +++  C SG+  EA  LL EM    + PD+VT+S LI  L K+  ++ A  L 
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS----------NCIQ-DVVL 345
            EM S  + PN      +L GLC+   + +A   F ++  S          N ++ DV  
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQT 305

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YNI+I G +  G   EA +LY ++  + I P  VT++S+I G CK  ++ +A ++ D++ 
Sbjct: 306 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMG 365

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
                P+ VT+ T +  YC+ G +   L L  EM  + I    +TY  +I+G  K   + 
Sbjct: 366 SKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNIN 425

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            ++ + ++M   GV PD IT   ++      ++L++A  +L ++ +
Sbjct: 426 GSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQM 471



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 224/457 (49%), Gaps = 36/457 (7%)

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           DI ++ +LI  +C    +   L     +   GF   ++ ++ LL  +C   R+ EAL L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE- 320
           ++M     KP++VT++ L+ GLC++ +V +A+ L + M    + PN   +G I+ G+C+ 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVT 380
            + ++   +      +S+   DVV+Y+ +IDG  K G   +A  L+ ++ +K I P IVT
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 381 FNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEME 440
           ++ +I GFC +GK ++A+RLL  + +  + P  VT++  +NA  +EG++     LLQEM 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 441 TKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY-----------VIGVTPDQITYNTI 489
           +  + P  VT   ++ GLC   KL++A+++ + M              GV PD  TYN +
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 490 IRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           I          +A +L  +M    + P + TY+ +I+GLC    L  A  +  S+   + 
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 550 SLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQE 609
           S   V + T+I  +C  G V   +  FC+M  +G   +   Y                  
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYI----------------- 412

Query: 610 ICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLI 646
               ++  F + G++    ++   MI SG+ PD   I
Sbjct: 413 ---TLIRGFRKVGNINGSLDIFQEMISSGVYPDTITI 446



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 226/438 (51%), Gaps = 13/438 (2%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           A+    K+ +L    ++ T+N+LL+ L   D + +  D       P NV T + +++GLC
Sbjct: 34  ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKP-NVVTFTTLMNGLC 92

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG-LHPDA 133
           ++ R+ +A+  L         P+ ++   I+   CK+G    A  L   M +   + PD 
Sbjct: 93  REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDV 152

Query: 134 FSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
             Y+ +I GL   G   +A     +M   G+ PD +TYS +  GF    + S A +++Q+
Sbjct: 153 VIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQE 212

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +L++   PD+VT++ LI    + G++     L + M+S G   NV+  + LL  +C SG+
Sbjct: 213 MLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGK 272

Query: 254 IDEALGLLYEMEAV-----------GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           + +AL +   M+             G++PD+ TY+ILI GL  + K  +A +LY EM  +
Sbjct: 273 LKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 332

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
            I P++  + +++ GLC++  + EA   FDS+   +   ++V +N +I GY K G + + 
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDG 392

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++L+ ++  + I  + +T+ +LI GF K G +  +  +   +   G+ P  +T    +  
Sbjct: 393 LELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTG 452

Query: 423 YCEEGNIQRLLALLQEME 440
              +  ++R LA+L+E++
Sbjct: 453 LWSKEELKRALAMLEELQ 470



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 180/346 (52%), Gaps = 17/346 (4%)

Query: 8   RTGMVHDAVFVIAKMKELD-LKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRN 62
           + G    A+ ++ KM+EL  +K  +  Y++++  L    RHTD   +L+ +++      +
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQ-NLFIEMQDKGIFPD 186

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T S +I+G C   +  +A   LQE   ++  P VV+ + +++   K G    A+ L  
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR-----------HGVEPDAITY 171
            M+  G+ P+  + N L+ GLC +G +++ALE    M +           +GVEPD  TY
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
           +IL  G     +   A ++ +++  +G  PD VTY+ +I G C+   ++E  ++ + M S
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
           + F  N++ ++ L++  CK+G +D+ L L  EM   G+  + +TY  LIRG  K   ++ 
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           ++ ++ EM S  + P++     +L GL  KE +  A    + L MS
Sbjct: 427 SLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMS 472



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 124/271 (45%), Gaps = 25/271 (9%)

Query: 373 RISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRL 432
           +I   I +FN LI  FC   K+  A      +   G  P+ VT+ T ++  C E  +   
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L L  +M      P  VT+T ++ GLC++ ++ EAV LL+ M   G+ P+QITY TI+  
Sbjct: 70  LDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 493 FCKCKDLRKAFQLLNQMW-LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISL 551
            CK  D   A  LL +M  L +++P    Y+ +IDGL  +G   +A  L + +Q+  I  
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 552 TKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEIC 611
             V Y+ +I   C+ G   +A     +M                    L     PD    
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEM--------------------LVRKISPDVVTF 225

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             ++ A  + GDL S  +L   MI SG+ P+
Sbjct: 226 SGLINALVKEGDLNSAQDLLQEMISSGVCPN 256


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
          Length = 1080

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 160/659 (24%), Positives = 289/659 (43%), Gaps = 20/659 (3%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
            + G V +A+ +  +MK+  +     +YNSL+      D   D   L+  + +     N Y
Sbjct: 347  QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 406

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T+ + I+   +      AI   +    K   P VV+ NA++    K G   +AK +F  +
Sbjct: 407  THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 466

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
               G+ PD  +Y ++I     A   +EA++   DM  +   PD +  + L    +   + 
Sbjct: 467  KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG 526

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
              AW++  +L     +P   TY  L+ G  + G V+E + L E M    +  N+I Y+ +
Sbjct: 527  DEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTI 586

Query: 245  LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
            L  +CK+G +++AL +LY M   G  PDL +Y+ +I GL K+++ ++A  ++ +M  K +
Sbjct: 587  LDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVL 645

Query: 305  SPNSFAHGAILLGLCEKEMITEA-RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+      IL    +  ++ EA  +  D  +      D    + +++G +K   I +++
Sbjct: 646  IPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSI 705

Query: 364  QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +    +    I+        LI   CK  K  +A  L+   K  G+      Y + +   
Sbjct: 706  EFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGL 765

Query: 424  CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
             +E  I     L  EM+    GP   TY +++  + K  +++E +++ E+M+  G     
Sbjct: 766  VDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTY 825

Query: 484  ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            +TYNTII    K + L +A  L   +      PT  TY  L+DGL   G +++A+ L   
Sbjct: 826  VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 885

Query: 544  LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT----------- 592
            + E+        Y  ++  H   G+  K    F  MV++G    I+ YT           
Sbjct: 886  MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQ 945

Query: 593  ----KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                 ++F  +L  G  PD     +++    +   L     L   M K G++P+ +  N
Sbjct: 946  LNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1004



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 231/503 (45%), Gaps = 3/503 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDIKVSETPRNVYTN 66
           G +  A   +  MKE  + ++  TYN L+Y L  +       ++Y  + V     +V T 
Sbjct: 139 GGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTY 198

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S+++    ++  ++  +  L+E       P+V S    +    +    + A  +   M  
Sbjct: 199 SVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMEN 258

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD  ++ +LI  LC AG + +A +    M +   +PD +TY  L   F        
Sbjct: 259 EGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQS 318

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
             ++   +   G + ++V YT +I   CQ+G V E L++ + M  +G      +Y+ L+S
Sbjct: 319 VMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLIS 378

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
              K+ R  +AL L   M+  G KP+  T+ + I    K  +  KAIQ Y  M SK I P
Sbjct: 379 GFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVP 438

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +  A  A+L GL +   +  A+  F  L       D + Y +MI    K     EAV+++
Sbjct: 439 DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 498

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             +IE    P ++  NSLI    K G+  +A R+   +K   LEP+  TY T +     E
Sbjct: 499 YDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGRE 558

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G ++ ++ LL+EM      P  +TY  ++  LCK   + +A+ +L  M   G  PD  +Y
Sbjct: 559 GKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSY 618

Query: 487 NTIIRSFCKCKDLRKAFQLLNQM 509
           NT+I    K +   +AF +  QM
Sbjct: 619 NTVIYGLVKEERYNEAFSIFCQM 641



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 221/461 (47%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +M + G+  +A++YN L++ L  +G   EALE    M   GV P   TYS+L   F    
Sbjct: 150 VMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRR 209

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +     +++++   G  P++ +YT+ I    Q    +E  ++   M ++G K +VI ++
Sbjct: 210 DVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHT 269

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           VL+  +C +GRI +A  + ++M+    KPD VTY  L+            ++++N M + 
Sbjct: 270 VLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKAD 329

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             + N  A+ A++  LC+   + EA   FD +     + +   YN +I G++K    G+A
Sbjct: 330 GYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDA 389

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++L++ +      P+  T    I  + K+G+   A +  + +K  G+ P  V     +  
Sbjct: 390 LELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFG 449

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
             + G +     +  E++   + P  +TYT++IK   K  K  EAV++  DM      PD
Sbjct: 450 LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 509

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +  N++I +  K     +A+++  Q+   NLEPT  TYN L+ GL   G +K    LL 
Sbjct: 510 VLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE 569

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +   N     + Y TI+   C  G V+ A+     M  KG
Sbjct: 570 EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 610



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 248/554 (44%), Gaps = 42/554 (7%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVY 64
            + G   +A  +  ++KE++L+ +  TYN+LL  L R   +  +  L +++  S  P N+ 
Sbjct: 522  KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLI 581

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T + ++D LC+   + DA+  L     K   P + S N ++    K      A  +FC M
Sbjct: 582  TYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 641

Query: 125  LK-------------------------------YGLHP----DAFSYNILIHGLCIAGSM 149
             K                               Y L P    D  S + L+ G+     +
Sbjct: 642  KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGI 701

Query: 150  EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG--AWKVIQKLLIKGSDPDIVTYT 207
            E+++EF   +   G+  D      L K  HL  Q     A ++++K    G       Y 
Sbjct: 702  EKSIEFAEIIASSGITLDDFFLCPLIK--HLCKQKKALEAHELVKKFKSFGVSLKTGLYN 759

Query: 208  VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
             LICG      ++    L   M   G   +   Y++LL +M KS RI+E L +  EM   
Sbjct: 760  SLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRK 819

Query: 268  GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
            G +   VTY+ +I GL K  ++ +AI LY  + S+  SP    +G +L GL +   I +A
Sbjct: 820  GYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDA 879

Query: 328  RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
               F+ ++   C  +  +YNI+++G+   GN  +   L++ ++++ I+P I ++  +I  
Sbjct: 880  ENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDT 939

Query: 388  FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
             CK G++ D       +   GLEP  +TY   ++   +   ++  ++L  EM+ K I P 
Sbjct: 940  LCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPN 999

Query: 448  HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
              TY  +I  L K  K  EA ++ E++   G  P+  TYN +IR +        A+    
Sbjct: 1000 LYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYG 1059

Query: 508  QMWLHNLEPTSATY 521
            +M +    P S+TY
Sbjct: 1060 RMIVGGCLPNSSTY 1073



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/570 (23%), Positives = 244/570 (42%), Gaps = 40/570 (7%)

Query: 7    SRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNV 63
            S+     +AV +   M E +    +   NSL   LY     D  W ++  +K        
Sbjct: 486  SKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTD 545

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             T + ++ GL ++ ++++ +  L+E     + P++++ N I+   CK G    A  +   
Sbjct: 546  GTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS 605

Query: 124  MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
            M   G  PD  SYN +I+GL       EA      M +  + PD  T   +   F  +  
Sbjct: 606  MTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGL 664

Query: 184  ISGAWKVIQKLLIK-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A  +I+   ++ GS  D  +   L+ G  +   +E+ ++  E++ S G  L+     
Sbjct: 665  MKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLC 724

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             L+  +CK  +  EA  L+ + ++ G+      Y+ LI GL  ++ +  A  L+ EM   
Sbjct: 725  PLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL 784

Query: 303  RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
               P+ F +  +L  + +   I E     + +         V YN +I G VK   + +A
Sbjct: 785  GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 844

Query: 363  VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            + LY  L+ +  SP+  T+  L+ G  K G++ DA  L + +  +G + +   Y   +N 
Sbjct: 845  IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 904

Query: 423  YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW-------------------- 462
            +   GN +++  L Q+M  + I P   +YT++I  LCK                      
Sbjct: 905  HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 964

Query: 463  ---------------KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
                           +L+EAV L  +M   G+ P+  TYN++I    K     +A ++  
Sbjct: 965  LITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYE 1024

Query: 508  QMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
            ++     +P   TYN LI G  V+G   +A
Sbjct: 1025 ELLTKGWKPNVFTYNALIRGYSVSGSTDSA 1054



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 175/353 (49%), Gaps = 39/353 (11%)

Query: 69   VIDGLCQQSRLQDAILFLQETAGKEFGPSVVS--LNAIMSRYCKLGFAEVAKGLFCLMLK 126
            +I  LC+Q +  +A   +++   K FG S+ +   N+++         ++A+GLF  M +
Sbjct: 726  LIKHLCKQKKALEAHELVKKF--KSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKE 783

Query: 127  YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG--------- 177
             G  PD F+YN+L+  +  +  +EE L+   +M R G E   +TY+ +  G         
Sbjct: 784  LGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQ 843

Query: 178  -----FHLLSQ---------------------ISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
                 ++L+SQ                     I  A  +  ++L  G   +   Y +L+ 
Sbjct: 844  AIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLN 903

Query: 212  GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
            G+   GN E+   L + M+ QG   ++ +Y++++ ++CK+G++++ L    ++  +GL+P
Sbjct: 904  GHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEP 963

Query: 272  DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
            DL+TY++LI GL K  ++ +A+ L+NEM  K I PN + + +++L L +     EA   +
Sbjct: 964  DLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMY 1023

Query: 332  DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            + L+      +V  YN +I GY   G+   A   Y ++I     P+  T+  L
Sbjct: 1024 EELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 192/447 (42%), Gaps = 7/447 (1%)

Query: 139 LIHGLCIAGSMEEALEFTNDMGRH---GVEPDAITYSI-LAKGFHLLSQISGAWKVIQKL 194
           +IH L  A    EALE      R         +  Y + L +G   +  ++  + V+Q+ 
Sbjct: 60  VIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ 119

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           ++K    ++ T+  +  G    G +        VM   G  LN   Y+ L+  + KSG  
Sbjct: 120 IVKA---NVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFD 176

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            EAL +   M   G+ P + TYS+L+    K+  V   + L  EM +  + PN +++   
Sbjct: 177 REALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTIC 236

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           +  L + +   EA      +    C  DV+ + ++I      G I +A  ++ ++ +   
Sbjct: 237 IRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 296

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P  VT+ +L+  F  NG       + + +K  G   + V YT  ++A C+ G +   L 
Sbjct: 297 KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE 356

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +  EM+ K I P   +Y  +I G  K  +  +A++L + M + G  P+  T+   I  + 
Sbjct: 357 MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYG 416

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K  +  KA Q    M    + P     N ++ GL  +G L  A  +   L+   +S   +
Sbjct: 417 KSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 476

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVE 581
            YT +IK         +A+  F  M+E
Sbjct: 477 TYTMMIKCCSKASKFDEAVKIFYDMIE 503



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/313 (21%), Positives = 130/313 (41%), Gaps = 15/313 (4%)

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N M++     G +G+  +++  +  + +  ++ TF ++  G    G +  A   L  +K 
Sbjct: 94  NYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKE 153

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+  +A TY   +    + G  +  L + + M    + P+  TY+V++    K+  ++ 
Sbjct: 154 AGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVET 213

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
            + LL +M   GV P+  +Y   IR   + K   +A+++L +M     +P   T+ +LI 
Sbjct: 214 VLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQ 273

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
            LC  G + +A  +   +++ +    +V Y T++      GD    M  +  M   G+  
Sbjct: 274 VLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYND 333

Query: 587 SIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           ++  YT                  F  M   G  P+Q     ++  F +    G   EL 
Sbjct: 334 NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 393

Query: 632 AVMIKSGLLPDKF 644
             M   G  P+ +
Sbjct: 394 KHMDIHGPKPNGY 406


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 220/435 (50%), Gaps = 36/435 (8%)

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           ++P  IT+SIL   F  L Q+  A+ ++  +L  G   D+   T L+ G C  G V E +
Sbjct: 101 IKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAV 160

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
            L    + +GF+ + + Y  +++ +CK G+  +A+ +  +M+ + + P+L+ Y+ +I GL
Sbjct: 161 SLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGL 220

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCI-QD 342
           CKQ  V +A  L  EM    I  + +++ +++ G C       A    D +++   +  D
Sbjct: 221 CKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPD 280

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           V  +NI+IDG  KLG + EA  +   +I++   P IV++N+L+ G+C +G V +A+++ D
Sbjct: 281 VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD 340

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK-- 460
            +      P+ ++Y T +N YC+   +   + LL EM  K + P  VTY  ++ GL K  
Sbjct: 341 KMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSG 400

Query: 461 ----QWKLQEAVQ-------------LLEDMYV----------------IGVTPDQITYN 487
               +W L EA++             LL+D +                 IG++P+  TYN
Sbjct: 401 RSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYN 460

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            ++   CK   L+ A ++   +     +P   TYNI+I GLC  G L  A+ LL  +  +
Sbjct: 461 ILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNN 520

Query: 548 NISLTKVAYTTIIKA 562
           N     + + TI++A
Sbjct: 521 NYLPNYITFDTIVRA 535



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 213/393 (54%), Gaps = 1/393 (0%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + ++ GLC + R+ +A+  L E   + F    V    I++  CK+G    A  +F  M K
Sbjct: 144 TTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKK 203

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             ++P+   YN +I GLC  G ++EA     +M  +G+E D  +Y+ +  GF  + +   
Sbjct: 204 IRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQA 263

Query: 187 AWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
           A K++ +++++G   PD+ T+ +LI G C++G V E   +  VM+ +G+K ++++Y+ L+
Sbjct: 264 AVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALM 323

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           +  C SG + EA  +  +M      P++++Y  LI G CK   V +A+ L  EM +K + 
Sbjct: 324 NGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLV 383

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P++  +  +L GL +           +++  S    D++ YN+++D Y K     +A+ L
Sbjct: 384 PDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALAL 443

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           ++ +IE  ISP+I T+N L+ G CK+G++  A+ +   +   G +P+  TY   ++  C+
Sbjct: 444 FQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCK 503

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           EG +    ALL +M      P ++T+  +++ +
Sbjct: 504 EGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 219/436 (50%), Gaps = 1/436 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+++ + +++ + +LG    A  L   +LK G   D      L+ GLC+ G + EA+  
Sbjct: 103 PSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSL 162

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            ++    G   D + Y  +  G   + +   A ++  K+      P+++ Y  +I G C+
Sbjct: 163 LHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCK 222

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG-LKPDLV 274
            G V+E   L   M+  G +L+V +Y+ ++   C  GR   A+ LL EM   G + PD+ 
Sbjct: 223 QGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY 282

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           T++ILI GLCK  +V +A  +   M  +   P+  ++ A++ G C    + EA+  FD +
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           +    + +V+ Y  +I+GY K+  + EA+ L  ++  K + P  VT+N L+ G  K+G+ 
Sbjct: 343 VERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRS 402

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
                L++ ++  G     +TY   ++ Y +     + LAL Q +    I P   TY ++
Sbjct: 403 LYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNIL 462

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           + GLCK  +L+ A ++ + +   G  P+  TYN +I   CK   L +A  LL +M  +N 
Sbjct: 463 LDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNY 522

Query: 515 EPTSATYNILIDGLCV 530
            P   T++ ++  + V
Sbjct: 523 LPNYITFDTIVRAILV 538



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 194/392 (49%), Gaps = 1/392 (0%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
           P ++T+++LI  + Q+G +     L   +L  GF+++V   + L+  +C  GR+ EA+ L
Sbjct: 103 PSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSL 162

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
           L+E    G + D V Y  +I GLCK  K   AIQ++ +M   R+ PN   +  ++ GLC+
Sbjct: 163 LHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCK 222

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEK-RISPSIV 379
           + ++ EA      ++ +    DV  YN MI G+  +G    AV+L  +++ + ++ P + 
Sbjct: 223 QGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY 282

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           TFN LI G CK G+V++A  ++  +   G +P  V+Y   MN YC  G++     +  +M
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
             +   P  ++Y  +I G CK   + EA+ LL +M+   + PD +TYN ++    K    
Sbjct: 343 VERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRS 402

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
              + L+  M          TYN+L+D    +     A  L   + E  IS     Y  +
Sbjct: 403 LYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNIL 462

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           +   C  G +  A   F  +  KG + +IR Y
Sbjct: 463 LDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTY 494



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 171/328 (52%), Gaps = 5/328 (1%)

Query: 63  VYTNSI----VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           VY N I    VIDGLC+Q  + +A     E         V S N+++  +C +G  + A 
Sbjct: 206 VYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAV 265

Query: 119 GLFCLMLKYG-LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
            L   M+  G ++PD +++NILI GLC  G + EA      M + G +PD ++Y+ L  G
Sbjct: 266 KLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNG 325

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           + L   +  A +V  K++ + + P++++Y  LI GYC++  V+E + L   M ++    +
Sbjct: 326 YCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPD 385

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
            + Y+ LL  + KSGR      L+  M A G   DL+TY++L+    K +K  KA+ L+ 
Sbjct: 386 TVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQ 445

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            +    ISPN   +  +L GLC+   +  A+  F  L    C  ++  YNIMI G  K G
Sbjct: 446 HIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEG 505

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLI 385
            + EA  L  +++     P+ +TF++++
Sbjct: 506 FLDEAEALLYKMVNNNYLPNYITFDTIV 533



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 165/318 (51%), Gaps = 4/318 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKV-SETPRNV 63
           + G+V +A  +  +M E  +++ + +YNS+++   ++        L D++ V  +   +V
Sbjct: 222 KQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDV 281

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
           YT +I+IDGLC+  R+ +A   +     + + P +VS NA+M+ YC  G    AK +F  
Sbjct: 282 YTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDK 341

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M++    P+  SY  LI+G C    ++EA+    +M    + PD +TY+ L  G     +
Sbjct: 342 MVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR 401

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
               W +++ +   G   D++TY VL+  Y +    ++ L L + ++  G   N+  Y++
Sbjct: 402 SLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNI 461

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           LL  +CKSGR+  A  +   + A G +P++ TY+I+I GLCK+  + +A  L  +M +  
Sbjct: 462 LLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNN 521

Query: 304 ISPNSFAHGAILLGLCEK 321
             PN      I+  +  K
Sbjct: 522 YLPNYITFDTIVRAILVK 539



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 177/419 (42%), Gaps = 52/419 (12%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEA-VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           ++ LLS++ K  R +  + L   +++   +KP L+T+SILI    +  ++  A  L    
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLL--- 128

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
                       G IL            +M F          DV +   ++ G    G +
Sbjct: 129 ------------GNIL------------KMGFQI--------DVRILTTLMKGLCLKGRV 156

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EAV L  + +++      V + ++I G CK GK  DA ++   +K   + P+ + Y T 
Sbjct: 157 LEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTV 216

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG- 478
           ++  C++G +     L  EM    I     +Y  +I G C   + Q AV+LL++M V G 
Sbjct: 217 IDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGK 276

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           V PD  T+N +I   CK   + +A+ ++  M     +P   +YN L++G C++G +  A 
Sbjct: 277 VYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAK 336

Query: 539 CLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK--------------GF 584
            +   + E       ++Y T+I  +C    V +AM    +M  K              G 
Sbjct: 337 QVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGL 396

Query: 585 EISIRD-YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             S R  Y       M ++G P D     V+L  + +         L   +I+ G+ P+
Sbjct: 397 SKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPN 455


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 230/474 (48%), Gaps = 5/474 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P   S  A++   C+ G  E    L   M +YG   D  +  +++  LC  G  ++  EF
Sbjct: 179 PDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEF 238

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M   G  P+ + Y+    G      +  A+ V+++++ +G  P++ T+T LI G C+
Sbjct: 239 FRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCK 298

Query: 216 IGNVEEGLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           IG  E   +L  +++ S  +K NV  Y+V++   C+ G++  A  LL  M   GLKP+  
Sbjct: 299 IGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTN 358

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+ LI G CK     +A +L N+M  +   PN + + A++ G C+K  I EA       
Sbjct: 359 TYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMA 418

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                  D + Y I+I  + K G+I  A+ L+ +++E    P I  + SLI  +C+  ++
Sbjct: 419 TSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQM 478

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            ++++  D   + GL P+  TYT+ +  YC+ G     L + + M         +TY  +
Sbjct: 479 EESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGAL 538

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I GLCK+ +L+EA  L E M    + P ++T  T+   +C+ +    A  +L+++   + 
Sbjct: 539 ISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRL---DK 595

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
                T ++++  L   GD+  A   L  + + + ++    YT  I + C E +
Sbjct: 596 RQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINS-CYENN 648



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 209/429 (48%), Gaps = 4/429 (0%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T ++V+  LC++ R +D   F +        P+VV+  A +   CK  + + A  +   M
Sbjct: 218 TCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEM 277

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +  GL P+ +++  LI GLC  G  E A   F   +     +P+  TY+++  G+    +
Sbjct: 278 VGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGK 337

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           ++ A  ++ +++ +G  P+  TYT LI G+C+ G+ +   +L   M  +GF  N+  Y+ 
Sbjct: 338 LARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNA 397

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++   CK G+I EA  +L    + GLK D +TY+ILI   CKQ  +  A+ L++ M    
Sbjct: 398 VIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENG 457

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+  A+ +++   C++  + E++ +FD  +M   +     Y  MI GY K+G    A+
Sbjct: 458 CCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLAL 517

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +++ ++++       +T+ +LI G CK  ++ +A+ L + +    L P  VT  T    Y
Sbjct: 518 RVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEY 577

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C        +++L  ++ +     H T  VV++ L     +  A   L+ +       D 
Sbjct: 578 CRREKTSIAVSVLDRLDKRQ--QVH-TVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDH 634

Query: 484 ITYNTIIRS 492
            TY   I S
Sbjct: 635 ATYTGFINS 643



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 200/408 (49%), Gaps = 6/408 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKE----LDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVS 57
           L  V  R G V +   ++A M      LD         SL    R  D+  + +  +  +
Sbjct: 187 LVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS-EFFRRMLET 245

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            TP NV   +  IDGLC++  ++ A   L+E  G+   P+V +   ++   CK+G+ E A
Sbjct: 246 GTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERA 305

Query: 118 KGLFCLMLKYGLH-PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
             LF  ++K   + P+  +Y ++I G C  G +  A      M   G++P+  TY+ L  
Sbjct: 306 FRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIG 365

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G         A++++ K+  +G  P+I TY  +I G+C+ G ++E  K+  +  SQG K 
Sbjct: 366 GHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKF 425

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + I Y++L++  CK G I  AL L   M   G  PD+  Y+ LI   C+Q ++ ++ + +
Sbjct: 426 DKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFF 485

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           ++     + P    + +++ G C+    T A   F+ ++ + C  D + Y  +I G  K 
Sbjct: 486 DKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKE 545

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
             + EA  LY  +++KR+ P  VT  +L + +C+  K + A  +LD +
Sbjct: 546 SRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRL 593



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 219/491 (44%), Gaps = 36/491 (7%)

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           +  RL +A   + E         V + N ++    + G    A+ +F  M + G+ PD  
Sbjct: 123 EAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDER 182

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           S+  L+   C  G +EE               DA+  ++   GF L              
Sbjct: 183 SFRALVVVCCREGKVEEV--------------DALLAAMWRYGFSL-------------- 214

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
                  D  T TV++   C+ G  ++  +    ML  G   NV+ Y+  +  +CK   +
Sbjct: 215 -------DNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYV 267

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC-SKRISPNSFAHGA 313
            +A  +L EM   GLKP++ T++ LI GLCK     +A +L+ ++  S    PN   +  
Sbjct: 268 KQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTV 327

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++ G C +  +  A M    ++      +   Y  +I G+ K G+   A +L  ++ ++ 
Sbjct: 328 MIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEG 387

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLL 433
             P+I T+N++I GFCK GK+ +A ++L      GL+   +TYT  +  +C++G+I   L
Sbjct: 388 FLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYAL 447

Query: 434 ALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
            L   M      P    YT +I   C+Q +++E+ +  +   +IG+ P + TY ++I  +
Sbjct: 448 DLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGY 507

Query: 494 CKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK 553
           CK      A ++  +M  +     S TY  LI GLC    L+ A  L   + +  +   +
Sbjct: 508 CKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCE 567

Query: 554 VAYTTIIKAHC 564
           V   T+   +C
Sbjct: 568 VTRVTLTFEYC 578



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 193/415 (46%), Gaps = 16/415 (3%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++++  ++GR+ EA  ++ EM + GL   + T + ++R   +      A ++++ M    
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           + P+  +  A+++  C +  + E      ++       D     +++    + G   +  
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           + +R+++E    P++V + + I G CK   V  A  +L+ +   GL+P+  T+TT ++  
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296

Query: 424 CEEGNIQRLLAL-LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           C+ G  +R   L L+ +++ +  P   TYTV+I G C++ KL  A  LL  M   G+ P+
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             TY T+I   CK     +AF+L+N+M      P   TYN +IDG C  G ++ A  +L 
Sbjct: 357 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 416

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------- 592
                 +   K+ YT +I  HC +G +  A+  F +MVE G    I  YT          
Sbjct: 417 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQR 476

Query: 593 -----KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                + FF   L  G  P ++    M+  + + G       +   M+++G   D
Sbjct: 477 QMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFAD 531



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 174/385 (45%), Gaps = 1/385 (0%)

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           ++  + + G + E   +   M S G  L V   + +L    ++G    A  +   M   G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           + PD  ++  L+   C++ KV +   L   M     S ++     ++  LCEK    +  
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
            +F  ++ +    +VV Y   IDG  K   + +A  +  +++ + + P++ T  +LI G 
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296

Query: 389 CKNGKVADARRL-LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           CK G    A RL L  IK    +P+  TYT  +  YC EG + R   LL  M  + + P 
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TYT +I G CK      A +L+  M   G  P+  TYN +I  FCK   +++A+++L 
Sbjct: 357 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 416

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
                 L+    TY ILI   C  G +  A  L   + E+       AYT++I  +C + 
Sbjct: 417 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQR 476

Query: 568 DVHKAMTFFCQMVEKGFEISIRDYT 592
            + ++  FF + +  G   + + YT
Sbjct: 477 QMEESQKFFDKCLMIGLLPTKQTYT 501



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 170/370 (45%), Gaps = 39/370 (10%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           NVYT++ +IDGLC+    + A  LFL+      + P+V +   ++  YC+ G    A+ L
Sbjct: 285 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 344

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M++ GL P+  +Y  LI G C  GS + A E  N M + G  P+  TY+ +  GF  
Sbjct: 345 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 404

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +I  A+KV++    +G   D +TYT+LI  +C+ G++   L L + M+  G   ++ A
Sbjct: 405 KGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEA 464

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKP----------------------------- 271
           Y+ L+S+ C+  +++E+     +   +GL P                             
Sbjct: 465 YTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMV 524

Query: 272 ------DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
                 D +TY  LI GLCK+ ++ +A  LY  M  KR+ P       +    C +E  +
Sbjct: 525 QNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTS 584

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
            A    D L   +  Q V   ++++     LG++  A    ++++++  +    T+   I
Sbjct: 585 IAVSVLDRL---DKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFI 641

Query: 386 YGFCKNGKVA 395
               +N + A
Sbjct: 642 NSCYENNRYA 651



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 133/301 (44%), Gaps = 23/301 (7%)

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           M+  + + G + EA  +  ++    +   + T N ++    + G    AR++ D +   G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P   ++   +   C EG ++ + ALL  M        + T TVV++ LC++ + ++  
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +    M   G  P+ + Y   I   CK + +++AF +L +M    L+P   T+  LIDGL
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKV-AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           C  G  + A  L + L + +     V  YT +I  +C EG + +A     +MVE+G + +
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH-QGGDLGSVFELAAVMIKSGLLPDKFLI 646
              YT                      LI  H +GG     FEL   M + G LP+ +  
Sbjct: 357 TNTYT---------------------TLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTY 395

Query: 647 N 647
           N
Sbjct: 396 N 396


>gi|242036455|ref|XP_002465622.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
 gi|241919476|gb|EER92620.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
          Length = 817

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 252/518 (48%), Gaps = 30/518 (5%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLR---HTDIMWDLYDDIKVS 57
           MLA  +S+ G V DAV +I +M+ L ++ S +T   L++        D+  D++D +   
Sbjct: 247 MLAVAFSKWGKVEDAVELIGRMEALGMQPSEKTLTVLVHGFARQGRVDVAMDMFDKMASY 306

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG-FAEV 116
               ++   S++I+GLC  + +  A+   ++       P V  L  ++  +C+ G F+ V
Sbjct: 307 GFSVDLAMYSVLIEGLCDGNEMGKAVKLYEDMKRDRVTPDVRLLKKMIEAFCRQGDFSTV 366

Query: 117 AKGLFCLMLKYGLHPDA--FSYNILIHGLCIAGSMEEALEFTNDM---GRHGVEPDAITY 171
             G F       L P +    YN+++ GL   G +E A +  + M   G+ G + D +  
Sbjct: 367 --GPFINENAVHLKPGSAVLLYNVILEGLTNHGEVEAASQLLSSMVRGGQRGSDDDTV-- 422

Query: 172 SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLS 231
                G H++        VI + +   SD    ++ +++CG C++  ++  L L + M+ 
Sbjct: 423 -----GVHIV--------VISEDVKPNSD----SFNIVVCGLCKVKKLDLALALTKDMVG 465

Query: 232 QGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHK 291
            G K  ++ ++ L+  +C S R+DEA  +  +M+ + LKP   TY+ L  G+C++     
Sbjct: 466 LGCKGKLLMFNDLILELCNSDRLDEAYEIFNQMKDLDLKPSEFTYNSLFYGICRRKDTSA 525

Query: 292 AIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMID 351
           A  L  EM +    P       ++  LC    ITEA  + D ++    + D+V Y+  ++
Sbjct: 526 AADLLREMRTSSHKPWIKNCTEMVQQLCFSGRITEALQFLDEMLKLGFLPDIVTYSAAMN 585

Query: 352 GYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           G  K+G    A+ L+R +  K   P +V  N LI GF K GK  +A+ +++ +   GL P
Sbjct: 586 GMCKIGETENALGLFRDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGLFP 645

Query: 412 SAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLL 471
           S VTY   ++ +C+ G I + ++ + +M  +   PT VTYT ++ GLC   +  EA+ L 
Sbjct: 646 SVVTYNLMIDIWCKSGKIDKAISCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIILW 705

Query: 472 EDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
             M   G +P++I Y   I   CKC     A     +M
Sbjct: 706 CKMSEKGCSPNEIAYTAFINGLCKCGRTETAVNYYEEM 743



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/585 (25%), Positives = 253/585 (43%), Gaps = 60/585 (10%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSV--VSLNAIMSRYCKLGFAEVAKG 119
           N YT + ++D L +  R +DA   LQE        SV   +L ++++ YC  G  E A  
Sbjct: 170 NSYTYNCLLDALAKAGRAEDAEARLQEMVASCGEESVDRYTLTSLLNCYCNAGRPEDASA 229

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           +   M +     D     +L       G +E+A+E    M   G++P   T ++L  GF 
Sbjct: 230 VLQRMSERAW-VDEHVLTMLAVAFSKWGKVEDAVELIGRMEALGMQPSEKTLTVLVHGFA 288

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
              ++  A  +  K+   G   D+  Y+VLI G C    + + +KL E M       +V 
Sbjct: 289 RQGRVDVAMDMFDKMASYGFSVDLAMYSVLIEGLCDGNEMGKAVKLYEDMKRDRVTPDVR 348

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD--LVTYSILIRGLCKQDKVHKAIQLYN 297
               ++ + C+ G     +G      AV LKP   ++ Y++++ GL    +V  A QL +
Sbjct: 349 LLKKMIEAFCRQGDF-STVGPFINENAVHLKPGSAVLLYNVILEGLTNHGEVEAASQLLS 407

Query: 298 EMC-------------------SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
            M                    S+ + PNS +   ++ GLC+ + +  A      ++   
Sbjct: 408 SMVRGGQRGSDDDTVGVHIVVISEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLG 467

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK-------- 390
           C   ++++N +I        + EA +++ Q+ +  + PS  T+NSL YG C+        
Sbjct: 468 CKGKLLMFNDLILELCNSDRLDEAYEIFNQMKDLDLKPSEFTYNSLFYGICRRKDTSAAA 527

Query: 391 ---------------------------NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
                                      +G++ +A + LD +   G  P  VTY+  MN  
Sbjct: 528 DLLREMRTSSHKPWIKNCTEMVQQLCFSGRITEALQFLDEMLKLGFLPDIVTYSAAMNGM 587

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ G  +  L L +++ +K   P  V + ++I G  K  K  EA +++E+M   G+ P  
Sbjct: 588 CKIGETENALGLFRDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGLFPSV 647

Query: 484 ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
           +TYN +I  +CK   + KA   + +M      PT  TY  L+DGLC  G    A  L   
Sbjct: 648 VTYNLMIDIWCKSGKIDKAISCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIILWCK 707

Query: 544 LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
           + E   S  ++AYT  I   C  G    A+ ++ +M  K F++ I
Sbjct: 708 MSEKGCSPNEIAYTAFINGLCKCGRTETAVNYYEEMKTKCFDLDI 752



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 132/566 (23%), Positives = 237/566 (41%), Gaps = 71/566 (12%)

Query: 86  LQETAGKEF---------GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHP--DAF 134
           L +TA + F          P+  + N ++    K G AE A+     M+        D +
Sbjct: 150 LPDTAARVFDAARTTLSCAPNSYTYNCLLDALAKAGRAEDAEARLQEMVASCGEESVDRY 209

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMG-RHGVEPDAITYSILAKGFHLLSQISGAWKVIQK 193
           +   L++  C AG  E+A      M  R  V+   +T  +LA  F    ++  A ++I +
Sbjct: 210 TLTSLLNCYCNAGRPEDASAVLQRMSERAWVDEHVLT--MLAVAFSKWGKVEDAVELIGR 267

Query: 194 LLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGR 253
           +   G  P   T TVL+ G+ + G V+  + + + M S GF +++  YSVL+  +C    
Sbjct: 268 MEALGMQPSEKTLTVLVHGFARQGRVDVAMDMFDKMASYGFSVDLAMYSVLIEGLCDGNE 327

Query: 254 IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS--FAH 311
           + +A+ L  +M+   + PD+     +I   C+Q          NE  +  + P S    +
Sbjct: 328 MGKAVKLYEDMKRDRVTPDVRLLKKMIEAFCRQGDFSTVGPFINEN-AVHLKPGSAVLLY 386

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSN---------CIQDVVL----------YNIMIDG 352
             IL GL     +  A     S++             +  VV+          +NI++ G
Sbjct: 387 NVILEGLTNHGEVEAASQLLSSMVRGGQRGSDDDTVGVHIVVISEDVKPNSDSFNIVVCG 446

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
             K+  +  A+ L + ++       ++ FN LI   C + ++ +A  + + +K   L+PS
Sbjct: 447 LCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAYEIFNQMKDLDLKPS 506

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             TY +     C   +      LL+EM T +  P     T +++ LC   ++ EA+Q L+
Sbjct: 507 EFTYNSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQLCFSGRITEALQFLD 566

Query: 473 DMYVIGVTPDQITY-----------------------------------NTIIRSFCKCK 497
           +M  +G  PD +TY                                   N +I  F K  
Sbjct: 567 EMLKLGFLPDIVTYSAAMNGMCKIGETENALGLFRDISSKCYLPDVVAHNILINGFRKAG 626

Query: 498 DLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYT 557
              +A +++ +M    L P+  TYN++ID  C +G +  A   +  + +     T V YT
Sbjct: 627 KFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKAISCVYKMIDEEKPPTVVTYT 686

Query: 558 TIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +++   C  G   +A+  +C+M EKG
Sbjct: 687 SLLDGLCNAGRPDEAIILWCKMSEKG 712



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/513 (21%), Positives = 217/513 (42%), Gaps = 73/513 (14%)

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV--LICGYCQIGNVEEGL 223
           P++ TY+ L        +   A   +Q+++    +  +  YT+  L+  YC  G  E+  
Sbjct: 169 PNSYTYNCLLDALAKAGRAEDAEARLQEMVASCGEESVDRYTLTSLLNCYCNAGRPEDAS 228

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
            + + M  + + ++    ++L  +  K G++++A+ L+  MEA+G++P   T ++L+ G 
Sbjct: 229 AVLQRMSERAW-VDEHVLTMLAVAFSKWGKVEDAVELIGRMEALGMQPSEKTLTVLVHGF 287

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
            +Q +V  A+ ++++M S   S                                    D+
Sbjct: 288 ARQGRVDVAMDMFDKMASYGFS-----------------------------------VDL 312

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
            +Y+++I+G      +G+AV+LY  +   R++P +     +I  FC+ G  +     ++ 
Sbjct: 313 AMYSVLIEGLCDGNEMGKAVKLYEDMKRDRVTPDVRLLKKMIEAFCRQGDFSTVGPFINE 372

Query: 404 IKLHGLEPSAVT-YTTFMNAYCEEGNIQRLLALLQEME-------------------TKA 443
             +H    SAV  Y   +      G ++    LL  M                    ++ 
Sbjct: 373 NAVHLKPGSAVLLYNVILEGLTNHGEVEAASQLLSSMVRGGQRGSDDDTVGVHIVVISED 432

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
           + P   ++ +V+ GLCK  KL  A+ L +DM  +G     + +N +I   C    L +A+
Sbjct: 433 VKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAY 492

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           ++ NQM   +L+P+  TYN L  G+C   D   A  LL  ++  +        T +++  
Sbjct: 493 EIFNQMKDLDLKPSEFTYNSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQL 552

Query: 564 CAEGDVHKAMTFFCQMVEKGFEISIRDYTKS---------------FFCMMLSNGFPPDQ 608
           C  G + +A+ F  +M++ GF   I  Y+ +                F  + S  + PD 
Sbjct: 553 CFSGRITEALQFLDEMLKLGFLPDIVTYSAAMNGMCKIGETENALGLFRDISSKCYLPDV 612

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
               +++  F + G      E+   M+  GL P
Sbjct: 613 VAHNILINGFRKAGKFDEAQEIMEEMLSKGLFP 645



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 143/287 (49%), Gaps = 3/287 (1%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTNSI 68
           + +A  +  +MK+LDLK S  TYNSL Y +   + T    DL  +++ S     +   + 
Sbjct: 488 LDEAYEIFNQMKDLDLKPSEFTYNSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTE 547

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           ++  LC   R+ +A+ FL E     F P +V+ +A M+  CK+G  E A GLF  +    
Sbjct: 548 MVQQLCFSGRITEALQFLDEMLKLGFLPDIVTYSAAMNGMCKIGETENALGLFRDISSKC 607

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             PD  ++NILI+G   AG  +EA E   +M   G+ P  +TY+++   +    +I  A 
Sbjct: 608 YLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKAI 667

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
             + K++ +   P +VTYT L+ G C  G  +E + L   M  +G   N IAY+  ++ +
Sbjct: 668 SCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIILWCKMSEKGCSPNEIAYTAFINGL 727

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
           CK GR + A+    EM+      D+ +   L   L  Q +  K  +L
Sbjct: 728 CKCGRTETAVNYYEEMKTKCFDLDIFSLLNLTNSLIAQGQASKGCEL 774



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 159/343 (46%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N  + +IV+ GLC+  +L  A+   ++  G      ++  N ++   C     + A  +F
Sbjct: 436 NSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAYEIF 495

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M    L P  F+YN L +G+C       A +   +M     +P     + + +     
Sbjct: 496 NQMKDLDLKPSEFTYNSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQLCFS 555

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I+ A + + ++L  G  PDIVTY+  + G C+IG  E  L L   + S+ +  +V+A+
Sbjct: 556 GRITEALQFLDEMLKLGFLPDIVTYSAAMNGMCKIGETENALGLFRDISSKCYLPDVVAH 615

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           ++L++   K+G+ DEA  ++ EM + GL P +VTY+++I   CK  K+ KAI    +M  
Sbjct: 616 NILINGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKAISCVYKMID 675

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +   P    + ++L GLC      EA + +  +    C  + + Y   I+G  K G    
Sbjct: 676 EEKPPTVVTYTSLLDGLCNAGRPDEAIILWCKMSEKGCSPNEIAYTAFINGLCKCGRTET 735

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
           AV  Y ++  K     I +  +L       G+ +    LL  +
Sbjct: 736 AVNYYEEMKTKCFDLDIFSLLNLTNSLIAQGQASKGCELLKVV 778


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 204/436 (46%), Gaps = 20/436 (4%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           +     +L  G  P+  TY  L+   CQ    EE   +   M +QG   NV +YS+L++ 
Sbjct: 37  YGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAG 96

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C+  ++DEA  LL EM   G +P++VTY  L+ GLCK  K+ +A+ L++ M  +   P+
Sbjct: 97  LCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPD 156

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  ++ G  +K  + EA   F+ ++   CI  V  YN ++ G+ + G  G    L++
Sbjct: 157 GVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFK 216

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            ++ +   P+I TFN+L+ GFCK G + +A RL   ++  G  P  V+Y T M   C +G
Sbjct: 217 DMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKG 276

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
                  LL+EM    +GP  V+Y ++I G  K   L  A++L  ++   G+ PD  +Y+
Sbjct: 277 KPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYS 336

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           TII   C+   +  AF +   M  +   P +A    L+ GLC    L  +  L  ++ + 
Sbjct: 337 TIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKF 396

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
                   Y  ++   C           F ++ E+GF                     PD
Sbjct: 397 ECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFS--------------------PD 436

Query: 608 QEICEVMLIAFHQGGD 623
            EI +V+L    +  D
Sbjct: 437 VEISKVILETLRRSDD 452



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 196/395 (49%)

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           SYN L+  L  +G  +      NDM   G  P+  TY  L +      +   A  V + +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             +G  P++ +Y++LI G C+   V+E  +L   M+  G + NV+ Y  LLS +CK G++
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            EA+ L   M   G  PD V Y++LI G  K+  + +A +L+ EM  K   P  F + ++
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           L G   K      +  F  ++   C+ ++  +N ++DG+ K+G++ EA +L+ ++     
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P +V++N+L+ G C  GK  +A+RLL  +   G+ P  V+Y   ++ Y + G +   + 
Sbjct: 259 PPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L  E+    + P   +Y+ +I  LC+  K+  A  + +DM   G  PD      ++   C
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC 378

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           + + L ++ +L   M      P    YN+L+  LC
Sbjct: 379 RGERLTESCELFQAMVKFECVPLIPEYNLLMYKLC 413



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 208/442 (47%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
             +S N ++    K G  +   G +  ML  G  P+ ++Y  L+  LC A   EEA    
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
             M   G  P+  +YSIL  G     ++  A +++ +++  G  P++VTY  L+ G C++
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G ++E + L   M+ +G   + + Y+VL+    K G + EA  L  EM   G  P + TY
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + L+ G  ++ +  +   L+ +M  +   PN F    +L G C+   + EA   F  +  
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
             C  DVV YN ++ G    G   EA +L R++I   + P IV++N LI G+ K+G +  
Sbjct: 256 LGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A +L   I   GLEP A +Y+T ++  C  G +     + ++M      P       ++ 
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVI 375

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLC+  +L E+ +L + M      P    YN ++   CK K      ++ +++      P
Sbjct: 376 GLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP 435

Query: 517 TSATYNILIDGLCVNGDLKNAD 538
                 ++++ L  + D + A+
Sbjct: 436 DVEISKVILETLRRSDDKEAAE 457



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 197/408 (48%), Gaps = 20/408 (4%)

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
           +    ++Y+ LL  + KSGR D   G   +M   G  P+  TY  L+R LC+  +  +A 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            ++  M ++  SPN F++  ++ GLC  + + EA    + +I      +VV Y  ++ G 
Sbjct: 73  SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K+G + EAV L+ +++ +   P  V +N LI GF K G + +A RL + +   G  P+ 
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            TY + ++ +  +G   R+ +L ++M  +   P   T+  ++ G CK   + EA +L  +
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M  +G  PD ++YNT++R  C      +A +LL +M    + P   +YNILIDG   +G 
Sbjct: 253 MRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           L +A  L   + +  +     +Y+TII   C  G V  A   F            +D   
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF------------KD--- 357

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                M++NG  PD  +   ++I   +G  L    EL   M+K   +P
Sbjct: 358 -----MIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 215/473 (45%), Gaps = 38/473 (8%)

Query: 33  TYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           +YN LL  L  +   D ++  Y+D+  +    N YT   ++  LCQ  R ++A    +  
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
           A +   P+V S + +++  C+    + A  L   M+  G  P+  +Y  L+ GLC  G +
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +EA++  + M   G  PD + Y++L  GF     +  A+++ +++L KG  P + TY  L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + G+ + G       L + ML QG   N+  ++ LL   CK G + EA  L  EM ++G 
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            PD+V+Y+ L+RG+C + K H+A +L  EM    + P                       
Sbjct: 259 PPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGP----------------------- 295

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
                       D+V YNI+IDGY K G +  A++L+ ++ +  + P   +++++I   C
Sbjct: 296 ------------DIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLC 343

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           + GKV  A  +   +  +G  P A      +   C    +     L Q M      P   
Sbjct: 344 RAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIP 403

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            Y +++  LCK  +  +  ++  ++   G +PD      I+ +  +  D   A
Sbjct: 404 EYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAA 456



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 168/373 (45%), Gaps = 20/373 (5%)

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           ++Y+ L+  L K  +       YN+M      PN++ +G +L  LC+ +   EAR  F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +    C  +V  Y+I+I G  +   + EA +L  ++I+    P++VT+ SL+ G CK GK
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + +A  L   +   G  P  V Y   ++ + ++G++     L +EM  K   PT  TY  
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           ++ G  ++ +      L +DM   G  P+  T+N ++  FCK  D+ +A +L  +M    
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
             P   +YN L+ G+C  G    A  LL  +    +    V+Y  +I  +   G +  A+
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             F ++ + G E     Y+    C+                     + G +G+ F +   
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLC--------------------RAGKVGAAFVVFKD 357

Query: 634 MIKSGLLPDKFLI 646
           MI +G  PD  ++
Sbjct: 358 MIANGSAPDAAVV 370



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 138/290 (47%), Gaps = 3/290 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           +S+ G + +A  +  +M E     ++ TYNSLL           +  L+ D+       N
Sbjct: 167 FSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           ++T + ++DG C+   + +A     E       P VVS N +M   C  G    A+ L  
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLR 286

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M++ G+ PD  SYNILI G   +G+++ A++   ++ + G+EPDA +YS +        
Sbjct: 287 EMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A+ V + ++  GS PD      L+ G C+   + E  +L + M+       +  Y+
Sbjct: 347 KVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYN 406

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           +L+  +CK+ R D+   + +E+   G  PD+    +++  L + D    A
Sbjct: 407 LLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAA 456



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 20/199 (10%)

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           ++Y  +++ L K  +         DM   G  P+  TY  ++RS C+ +   +A  +   
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M      P   +Y+ILI GLC    +  A  LL  + +       V Y +++   C  G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
           + +A+  F +MV +G             C       PPD  +  V++  F + GD+G  +
Sbjct: 138 LKEAVDLFSRMVYRG-------------C-------PPDGVVYNVLIDGFSKKGDMGEAY 177

Query: 629 ELAAVMIKSGLLPDKFLIN 647
            L   M++ G +P  F  N
Sbjct: 178 RLFEEMLEKGCIPTVFTYN 196


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 250/532 (46%), Gaps = 27/532 (5%)

Query: 24  ELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR--NVYTNSIVIDGLCQQSRLQD 81
           E    V  + Y       +  D+   + D+ +   + +  N   N I+ +GL  +  L+ 
Sbjct: 112 ERSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRG-LEF 170

Query: 82  AILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIH 141
               +         P+ +S N ++   CKLGF + A  +F  M +    PD ++Y  L+ 
Sbjct: 171 YDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMD 230

Query: 142 GLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDP 201
           GLC    ++EA+   ++M   G  P  + Y++L  G      +S   K++  + +KG  P
Sbjct: 231 GLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFP 290

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           + VTY  LI G C  G +++ + L E M+S     N + Y  L++ + K  R  +   LL
Sbjct: 291 NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLL 350

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
             ME  G + +   YS+LI GL K+ K  +A+ L+ +M  K   PN   + A++ GLC +
Sbjct: 351 ISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCRE 410

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
               EA+   + +I S C+ +V  Y+ ++ G+ K G   EA+Q++R++ E   S +   +
Sbjct: 411 GKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCY 470

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM-- 439
           + LI G C  G+V +A  +   +   G++P  V Y++ +   C  G++   L L  EM  
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLC 530

Query: 440 -ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK--- 495
            E     P  VTY +++ GLC Q  +  AV LL  M   G  PD IT NT + +  +   
Sbjct: 531 QEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSD 590

Query: 496 -CKDLRK-----------------AFQLLNQMWLHNLEPTSATYNILIDGLC 529
            C++ R                  A +++  M    L P ++T+ +++  +C
Sbjct: 591 SCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEIC 642



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 226/454 (49%), Gaps = 12/454 (2%)

Query: 100 SLNAIMSRYCKLGFAEVAKGLFCLML-KYGLHPDAFSYNILIHGLCIAGSMEEALEF--- 155
           S   +   Y K    E A  LF  M+ ++       S+N +++ +   G     LEF   
Sbjct: 114 SFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173

Query: 156 -TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
             N      + P+ ++++++ K    L  +  A +V + +  K   PD  TY  L+ G C
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLC 233

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           +   ++E + L + M S+G   + + Y+VL+  +CK G +     L+  M   G  P+ V
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEV 293

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+ LI GLC + K+ KA+ L   M S +  PN   +G ++ GL ++    +      S+
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISM 353

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                  +  +Y+++I G  K G   EA+ L++++ EK   P+IV ++++I G C+ GK 
Sbjct: 354 EERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKP 413

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            +A+ +L+ +   G  P+  TY++ M  + + G  +  + + +EM+          Y+V+
Sbjct: 414 NEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVL 473

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH-- 512
           I GLC   +++EA+ +   M  IG+ PD + Y+++I+  C    +  A +L ++M     
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEE 533

Query: 513 -NLEPTSATYNILIDGLCVNGDLKNA----DCLL 541
              +P   TYNIL+DGLC+  D+  A    +C+L
Sbjct: 534 PKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCML 567



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 195/412 (47%), Gaps = 3/412 (0%)

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +   + P+  S+N++I  LC  G ++ A+E    M      PD  TY  L  G     +I
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERI 238

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  ++ ++  +G  P  V Y VLI G C+ G++    KL + M  +G   N + Y+ L
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTL 298

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +C  G++D+A+ LL  M +    P+ VTY  LI GL KQ +     +L   M  +  
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGY 358

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             N   +  ++ GL ++    EA   +  +    C  ++V+Y+ +IDG  + G   EA +
Sbjct: 359 RLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKE 418

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +   +I     P++ T++SL+ GF K G   +A ++   +   G   +   Y+  ++  C
Sbjct: 419 ILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLC 478

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV---IGVTP 481
             G ++  + +  +M T  I P  V Y+ +IKGLC    +  A++L  +M         P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           D +TYN ++   C  KD+ +A  LLN M     +P   T N  ++ L    D
Sbjct: 539 DVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSD 590



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 209/435 (48%), Gaps = 21/435 (4%)

Query: 217 GNVEEGLKLREVMLSQGFKLNV----IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           G    GL+  + +++    +N+    +++++++ ++CK G +D A+ +   M      PD
Sbjct: 162 GLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPD 221

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
             TY  L+ GLCK++++ +A+ L +EM S+  SP+   +  ++ GLC+K  ++      D
Sbjct: 222 GYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVD 281

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
           ++ +  C  + V YN +I G    G + +AV L  +++  +  P+ VT+ +LI G  K  
Sbjct: 282 NMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQR 341

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           +  D  RLL +++  G   +   Y+  ++   +EG  +  + L ++M  K   P  V Y+
Sbjct: 342 RAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYS 401

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
            VI GLC++ K  EA ++L  M   G  P+  TY+++++ F K     +A Q+  +M   
Sbjct: 402 AVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDET 461

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
                   Y++LIDGLC  G +K A  +   +    I    VAY+++IK  C  G +  A
Sbjct: 462 GCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAA 521

Query: 573 MTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
           +  + +M+        ++  KS           PD     ++L       D+    +L  
Sbjct: 522 LKLYHEML-------CQEEPKS----------QPDVVTYNILLDGLCMQKDVSRAVDLLN 564

Query: 633 VMIKSGLLPDKFLIN 647
            M+  G  PD    N
Sbjct: 565 CMLDRGCDPDVITCN 579



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 130/318 (40%), Gaps = 64/318 (20%)

Query: 3   AFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSET 59
             V  R  M  D   ++  M+E   +++   Y+ L   L+     +    L+  +     
Sbjct: 336 GLVKQRRAM--DGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGC 393

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
             N+   S VIDGLC++ +  +A   L         P+V + +++M  + K G +E A  
Sbjct: 394 RPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQ 453

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           ++  M + G   + F Y++LI GLC  G ++EA+   + M   G++PD + YS + KG  
Sbjct: 454 VWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLC 513

Query: 180 LLSQISGAWKVIQKLLIK---GSDPDIVTYTVLICGYCQIGNV----------------- 219
            +  +  A K+  ++L +    S PD+VTY +L+ G C   +V                 
Sbjct: 514 GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDP 573

Query: 220 -------------------EEG--------------------LKLREVMLSQGFKLNVIA 240
                              EEG                     K+ EVML +        
Sbjct: 574 DVITCNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTST 633

Query: 241 YSVLLSSMCKSGRIDEAL 258
           +++++  +CK  +I+ A+
Sbjct: 634 WAMIVPEICKPKKINAAI 651


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 230/450 (51%), Gaps = 20/450 (4%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           LC   + + A   + E  G  F P   + + ++   C     E A  LF  M   G+ PD
Sbjct: 464 LCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPD 523

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
            ++Y ILI     AG +++A  + ++M R G EP  +TY+ L   +    ++S A ++ +
Sbjct: 524 VYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 583

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG--------FKL-------- 236
            ++ KG  P+++TYT LI GYC+ GN+E+  ++   M            FK+        
Sbjct: 584 LMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKP 643

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           NV+ Y  L+  +CK+ ++ +A  LL  M   G +P+ + Y  LI G CK  K+ +A +++
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           ++M  +  +PN + + +++  L + + +         ++ ++C  ++V+Y  MIDG  K+
Sbjct: 704 HKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKV 763

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
               EA +L   + EK   P++VT+ ++I GF K GKV     L   +   G  P+ VTY
Sbjct: 764 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 823

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV-TYTVVIKGLCKQWKLQEAVQLLEDMY 475
           T  +N  C  G++    ALL+EM+ +   P HV +Y  VI+G  +++ L  ++ LLE++ 
Sbjct: 824 TVLINHCCATGHLDEAYALLEEMK-QTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVE 880

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
             G  P  + Y  +I +F K   L  A +L
Sbjct: 881 KNGSAPTILLYKVLIDNFVKAGRLEVALEL 910



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 157/708 (22%), Positives = 300/708 (42%), Gaps = 82/708 (11%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
           R G+ + A+  + ++K+   K +  TYN+L+      D +     ++ ++       + +
Sbjct: 218 RNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEF 277

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA------- 117
           T       LC+  + ++A+  +++   ++F P+ +  N ++S  C+  F E A       
Sbjct: 278 TLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFLNRM 334

Query: 118 ----------------------------KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
                                       K +  +M+  G +P    +N L+H  C +   
Sbjct: 335 RSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF 394

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG------AWKVIQKLLIKGS---D 200
             A +    M +   +P  + Y+IL        ++ G      A K   ++L  G+    
Sbjct: 395 SYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNK 454

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGL 260
            ++V++   +CG+   G  E+  K+   M+  GF  +   YS ++  +C + R++ A  L
Sbjct: 455 VNVVSFARCLCGF---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFL 511

Query: 261 LYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE 320
             EM+  G+ PD+ TY+ILI    K   + +A    +EM      P    +  ++    +
Sbjct: 512 FKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLK 571

Query: 321 KEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQL----------- 369
            + ++ A   F+ +I   C  +V+ Y  +IDGY K GNI +A Q+Y ++           
Sbjct: 572 AKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDM 631

Query: 370 ---IEKRIS--PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
              I+  ++  P++VT+ +L+ G CK  KV DAR LL+T+ + G EP+ + Y   ++ +C
Sbjct: 632 YFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFC 691

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +   +     +  +M  +   P   TY+ +I  L K  +L   +++L  M      P+ +
Sbjct: 692 KAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIV 751

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            Y  +I    K     +A++L+  M     +P   TY  +IDG    G +     L   +
Sbjct: 752 IYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM 811

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSF------FCM 598
                +   V YT +I   CA G + +A     +M +  +   +  Y K        F +
Sbjct: 812 GSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL 871

Query: 599 ML-------SNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
            L        NG  P   + +V++  F + G L    EL   +I + +
Sbjct: 872 SLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASM 919



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 239/556 (42%), Gaps = 45/556 (8%)

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           CK+G    A     L+ K    P+   YN +I GLC A   EEA++F N M      P+ 
Sbjct: 287 CKVGKWREA---LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNV 343

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
            TY IL  G     Q+    +++  ++ +G  P    +  L+  YC+  +     KL + 
Sbjct: 344 QTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKK 403

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRI------DEALGLLYEMEAVGLKPDLVTYSILIRG 282
           M     K   + Y++L+ S+C  G +      + A     EM + G   + V      R 
Sbjct: 404 MEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARC 463

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           LC   K  KA ++ +EM      P++  +  ++  LC    +  A   F  +  +  + D
Sbjct: 464 LCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPD 523

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           V  Y I+ID + K G I +A     +++     P++VT+ +LI+ + K  KV+ A  L +
Sbjct: 524 VYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 583

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI----------------GP 446
            +   G  P+ +TYT  ++ YC+ GNI++   +   M   A                  P
Sbjct: 584 LMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKP 643

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             VTY  ++ GLCK  K+++A  LLE M+V G  P+ I Y+ +I  FCK   L +A ++ 
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           ++M      P   TY+ LID L  +  L     +L  + E++ +   V YT +I      
Sbjct: 704 HKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKV 763

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
               +A      M EKG + ++  YT                     M+  F + G +  
Sbjct: 764 AKTDEAYKLMLMMEEKGCKPNVVTYT--------------------AMIDGFGKAGKVDK 803

Query: 627 VFELAAVMIKSGLLPD 642
             EL   M   G  P+
Sbjct: 804 CLELFREMGSKGCAPN 819



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/588 (24%), Positives = 259/588 (44%), Gaps = 72/588 (12%)

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG------F 113
           P     NS+V    C+      A   L++    E  P  V  N ++   C  G       
Sbjct: 376 PSYTIFNSLV-HAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVT 434

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            E+A+  +  ML  G   +  +       LC  G  E+A +  ++M  +G  PD  TYS 
Sbjct: 435 FELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSE 494

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           +       S++  A+ + +++   G  PD+ TYT+LI  + + G +++     + M+  G
Sbjct: 495 VIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDG 554

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            +  V+ Y+ L+ +  K+ ++  A  L   M A G  P+++TY+ LI G CK   + KA 
Sbjct: 555 CEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKAC 614

Query: 294 QLYNEMCSKRI----------------SPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           Q+Y  M                      PN   +GA++ GLC+   + +AR   +++ + 
Sbjct: 615 QIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVD 674

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL------------- 384
            C  + ++Y+ +IDG+ K   + EA +++ +++E+  +P++ T++SL             
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLV 734

Query: 385 ----------------------IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
                                 I G  K  K  +A +L+  ++  G +P+ VTYT  ++ 
Sbjct: 735 LKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDG 794

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           + + G + + L L +EM +K   P  VTYTV+I   C    L EA  LLE+M        
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM-------K 847

Query: 483 QITYNTIIRSFCKC-----KDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           Q  +   + S+CK      ++   +  LL ++  +   PT   Y +LID     G L+ A
Sbjct: 848 QTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVA 907

Query: 538 DCLLVSLQEHNISLT--KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
             L   +   ++S+T  K  YT++I +      +  A   F  M+  G
Sbjct: 908 LELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDG 955



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 129/578 (22%), Positives = 229/578 (39%), Gaps = 75/578 (12%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N+LI   C  G    ALE    +   G +P  +TY+ L + F    ++  A  V +++  
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
            G   D  T        C++G   E L L E    + F  N I Y+ ++S +C++   +E
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEE 326

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+  L  M +    P++ TY IL+ G   + ++ +  ++ + M ++   P+     +++ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 317 GLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK--------------------- 355
             C+ +  + A      +    C    V+YNI+I                          
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEML 446

Query: 356 --------------------LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                                G   +A ++  +++     P   T++ +I   C   +V 
Sbjct: 447 SAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVE 506

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A  L   +K  G+ P   TYT  ++ + + G I++    L EM      PT VTYT +I
Sbjct: 507 NAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLI 566

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW----- 510
               K  K+  A +L E M   G  P+ ITY  +I  +CK  ++ KA Q+  +M      
Sbjct: 567 HAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADI 626

Query: 511 ---------LHNL--EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTI 559
                     +N+  +P   TY  L+DGLC    +K+A  LL ++         + Y  +
Sbjct: 627 PDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDAL 686

Query: 560 IKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGF 604
           I   C    + +A   F +MVE+G+  ++  Y+                     ML N  
Sbjct: 687 IDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSC 746

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            P+  I   M+    +       ++L  +M + G  P+
Sbjct: 747 APNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPN 784



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 216/504 (42%), Gaps = 28/504 (5%)

Query: 101 LNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMG 160
           L+AI  R C  GF E    +     +  L+PD     +++  L    S E  ++F    G
Sbjct: 111 LDAI--RNCDDGFGEKTH-IVLRQFRQKLNPD-----LVVEILSFLKSPELCVKFFLWAG 162

Query: 161 RH-GVEPDAITYSILAKGFHLLSQISGAW-KVIQKLL--IKGSDPDIVT--YTVLICGYC 214
           R  G +     Y  L   F       G++ +V ++ L  I+G D +++     VLI   C
Sbjct: 163 RQIGYDHTPAVYIALLDVFE-----RGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCC 217

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           + G     L+    +   G+K   + Y+ L+    ++ ++D A  +  EM  +GL  D  
Sbjct: 218 RNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEF 277

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           T     + LCK  K  +A+ L  +   +   PN+  +  ++ GLCE     EA  + + +
Sbjct: 278 TLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFLNRM 334

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
             ++CI +V  Y I++ G +    +G   ++   +I +   PS   FNSL++ +CK+   
Sbjct: 335 RSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF 394

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL------LQEMETKAIGPTH 448
           + A +LL  ++    +P  V Y   + + C  G +   +          EM +       
Sbjct: 395 SYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNK 454

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           V      + LC   K ++A +++ +M   G  PD  TY+ +I   C    +  AF L  +
Sbjct: 455 VNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKE 514

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    + P   TY ILID     G +K A   L  +       T V YTT+I A+     
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574

Query: 569 VHKAMTFFCQMVEKGFEISIRDYT 592
           V  A   F  M+ KG   ++  YT
Sbjct: 575 VSVANELFELMIAKGCFPNVITYT 598



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 35/279 (12%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NVYT S +ID L +  RL   +  L +       P++V    ++    K+   + A  L 
Sbjct: 714 NVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLM 773

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL------- 174
            +M + G  P+  +Y  +I G   AG +++ LE   +MG  G  P+ +TY++L       
Sbjct: 774 LMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCAT 833

Query: 175 ---AKGFHLLSQ---------ISGAWKVIQ--------------KLLIKGSDPDIVTYTV 208
               + + LL +         +S   KVI+              ++   GS P I+ Y V
Sbjct: 834 GHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKV 893

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIA--YSVLLSSMCKSGRIDEALGLLYEMEA 266
           LI  + + G +E  L+L + ++S    +      Y+ L+ S   + +ID A  L Y+M  
Sbjct: 894 LIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIR 953

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
            G+ PDL T+  L+ GL +  +  +A+QL + +C   I+
Sbjct: 954 DGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDIN 992


>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
          Length = 784

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 269/554 (48%), Gaps = 6/554 (1%)

Query: 5   VYSRTGMV-HDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSE-T 59
           VYS+  +   + V ++A MKE  +     TYN+L+   R   +  +   ++D++K S   
Sbjct: 216 VYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFE 275

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P  V  NS+ +D   +  R  +AI  +QE       PSVV+ N+++S Y K G  E A  
Sbjct: 276 PDKVTFNSL-LDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVA 334

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M   G+ PD  +Y  LI GL  AG ++ A+   ++M R+G +P+  TY+ L K   
Sbjct: 335 LKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHG 394

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           +  +      V  +L   G  PDIVT+  L+  + Q G   E   + + M   G+     
Sbjct: 395 VRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERD 454

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y  L+SS  + G  D A+ +   M   G+ PD+ TY+ ++  L +  +  +A +L+ EM
Sbjct: 455 TYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEM 514

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             +   P+ +++ ++L      + + + +   D +          L   ++    K+ N+
Sbjct: 515 EERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNL 574

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA + + +L +KR S  I   N+++  + KN  V    ++L  +K   +  SA TY + 
Sbjct: 575 AEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSL 634

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           M+ Y   G+ ++   +L E+++  + P   +Y  VI    ++ +++EA +L  +M   G+
Sbjct: 635 MHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGL 694

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD +TYN  ++S+       +A +L+  M     +P   TYN +++G C NG L +A  
Sbjct: 695 KPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKI 754

Query: 540 LLVSLQEHNISLTK 553
            + +L + +   +K
Sbjct: 755 FVSNLPQLHPGYSK 768



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/562 (23%), Positives = 254/562 (45%), Gaps = 40/562 (7%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +  I  + +  RL +A   L    G + G    +  A++S + + G    A  +F  M+ 
Sbjct: 145 ATAIRVMARAGRLAEASALLDAAPGPDAG----AYTALVSAFSRAGRFRDAVAVFRRMVD 200

Query: 127 YGLHPDAFSYNILIHGLC-IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
            G+ P   +YN+++H    +A   +E +E    M  HGV PD  TY+ L       +   
Sbjct: 201 SGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYK 260

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A +V  ++   G +PD VT+  L+  Y +    +E +++ + M   G   +V+ Y+ L+
Sbjct: 261 EAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLI 320

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           SS  K G +++A+ L  EME  G+KPD+VTY+ LI GL +  K+  AI  Y+EM      
Sbjct: 321 SSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCK 380

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI----------------- 348
           PN   + A++     +    E    FD L  +  + D+V +N                  
Sbjct: 381 PNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGV 440

Query: 349 ------------------MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
                             +I  Y + G    A+Q+Y++++E  I P + T+N+++    +
Sbjct: 441 FKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALAR 500

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G+   A +L   ++    +P   +Y++ ++AY     + ++ AL  ++ ++ I P +  
Sbjct: 501 GGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWL 560

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
              ++    K   L EA +   ++     + D    N ++  + K + +RK  ++L+ M 
Sbjct: 561 VKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMK 620

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              +  ++ATYN L+      GD +  + +L  ++   +   + +Y T+I A+  +G + 
Sbjct: 621 ESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMK 680

Query: 571 KAMTFFCQMVEKGFEISIRDYT 592
           +A   F +M   G +  +  Y 
Sbjct: 681 EASRLFSEMKCSGLKPDVVTYN 702



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 132/594 (22%), Positives = 264/594 (44%), Gaps = 43/594 (7%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG--FAEVAKGLFCLM 124
           + ++    +  R +DA+   +        P++V+ N ++  Y K+   + EV + L   M
Sbjct: 176 TALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE-LVASM 234

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            ++G+ PD ++YN LI         +EA +  ++M   G EPD +T++ L   +    + 
Sbjct: 235 KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRH 294

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +VIQ++   G  P +VTY  LI  Y + G +E+ + L++ M  +G K +V+ Y+ L
Sbjct: 295 DEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTL 354

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +S + ++G+ID A+    EM   G KP+L TY+ LI+    + K  + + +++E+ S   
Sbjct: 355 ISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGF 414

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+      +L    +  + +E    F  +  +  I +   Y  +I  Y + G    A+Q
Sbjct: 415 VPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQ 474

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +Y++++E  I P + T+N+++    + G+   A +L   ++    +P   +Y++ ++AY 
Sbjct: 475 IYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYA 534

Query: 425 EEGNIQRLLALLQEMETKAIGP------THVTYTVVIKGLCKQWK--------------- 463
               + ++ AL  ++ ++ I P      T V     +  L +  K               
Sbjct: 535 NAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDIN 594

Query: 464 --------------LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
                         +++  ++L  M    +     TYN+++  + +  D  K   +L ++
Sbjct: 595 VLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEI 654

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               + P   +YN +I      G +K A  L   ++   +    V Y   +K++ +    
Sbjct: 655 KSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMF 714

Query: 570 HKAMTFFCQMVEKGFEISIRDYTK--SFFCMMLSNGFPPDQEICEVMLIAFHQG 621
            +A+     MV +G + + R Y      +C    NG   D +I    L   H G
Sbjct: 715 EEAIELVRYMVTQGCKPNERTYNSIVEGYC---RNGKLTDAKIFVSNLPQLHPG 765


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 196/395 (49%)

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           SYN L+  L  +G  +      NDM   G  P+  TY  L +      +   A  V + +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
             +G  P++ +Y++LI G C+   V+E  +L   M+  G + NV+ Y  LLS +CK G++
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            EA+ L   M   G  PD V Y++LI G  K+  + +A +L+ EM  K   P  F + ++
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           L G   K      +  F  ++   C+ ++  +N ++DG+ K+G++ EA +L+ ++     
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P +V++N+LI G C  GK  +A+RLL  +   G+ P  V+Y   ++ Y + G +   + 
Sbjct: 259 PPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           L  E+    + P   +Y+ +I  LC+  K+  A  + +DM   G  PD      ++   C
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC 378

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLC 529
           + + L ++ +L   M      P    YN+L+  LC
Sbjct: 379 RGERLTESCELFQAMVKFECVPLIPEYNLLMYKLC 413



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 204/436 (46%), Gaps = 20/436 (4%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           +     +L  G  P+  TY  L+   CQ    EE   +   M +QG   NV +YS+L++ 
Sbjct: 37  YGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAG 96

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C+  ++DEA  LL EM   G +P++VTY  L+ GLCK  K+ +A+ L++ M  +   P+
Sbjct: 97  LCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPD 156

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  ++ G  +K  + EA   F+ ++   CI  V  YN ++ G+ + G  G    L++
Sbjct: 157 GVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFK 216

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            ++ +   P+I TFN+L+ GFCK G + +A RL   ++  G  P  V+Y T +   C +G
Sbjct: 217 DMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKG 276

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
                  LL+EM    +GP  V+Y ++I G  K   L  A++L  ++   G+ PD  +Y+
Sbjct: 277 KPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYS 336

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           TII   C+   +  AF +   M  +   P +A    L+ GLC    L  +  L  ++ + 
Sbjct: 337 TIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKF 396

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
                   Y  ++   C           F ++ E+GF                     PD
Sbjct: 397 ECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFS--------------------PD 436

Query: 608 QEICEVMLIAFHQGGD 623
            EI +V+L    +  D
Sbjct: 437 VEISKVILETLRRSDD 452



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 207/442 (46%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
             +S N ++    K G  +   G +  ML  G  P+ ++Y  L+  LC A   EEA    
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
             M   G  P+  +YSIL  G     ++  A +++ +++  G  P++VTY  L+ G C++
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G ++E + L   M+ +G   + + Y+VL+    K G + EA  L  EM   G  P + TY
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + L+ G  ++ +  +   L+ +M  +   PN F    +L G C+   + EA   F  +  
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
             C  DVV YN +I G    G   EA +L R++I   + P IV++N LI G+ K+G +  
Sbjct: 256 LGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A +L   I   GLEP A +Y+T ++  C  G +     + ++M      P       ++ 
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVI 375

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           GLC+  +L E+ +L + M      P    YN ++   CK K      ++ +++      P
Sbjct: 376 GLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP 435

Query: 517 TSATYNILIDGLCVNGDLKNAD 538
                 ++++ L  + D   A+
Sbjct: 436 DVEISKVILETLRRSDDKDAAE 457



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 198/408 (48%), Gaps = 20/408 (4%)

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
           +    ++Y+ LL  + KSGR D   G   +M A G  P+  TY  L+R LC+  +  +A 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            ++  M ++  SPN F++  ++ GLC  + + EA    + +I      +VV Y  ++ G 
Sbjct: 73  SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K+G + EAV L+ +++ +   P  V +N LI GF K G + +A RL + +   G  P+ 
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
            TY + ++ +  +G   R+ +L ++M  +   P   T+  ++ G CK   + EA +L  +
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M  +G  PD ++YNT+IR  C      +A +LL +M    + P   +YNILIDG   +G 
Sbjct: 253 MRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           L +A  L   + +  +     +Y+TII   C  G V  A   F            +D   
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF------------KD--- 357

Query: 594 SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLP 641
                M++NG  PD  +   ++I   +G  L    EL   M+K   +P
Sbjct: 358 -----MIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 214/469 (45%), Gaps = 38/469 (8%)

Query: 33  TYNSLLYNLRHT---DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           +YN LL  L  +   D ++  Y+D+  +    N YT   ++  LCQ  R ++A    +  
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
           A +   P+V S + +++  C+    + A  L   M+  G  P+  +Y  L+ GLC  G +
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +EA++  + M   G  PD + Y++L  GF     +  A+++ +++L KG  P + TY  L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + G+ + G       L + ML QG   N+  ++ LL   CK G + EA  L  EM ++G 
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            PD+V+Y+ LIRG+C + K H+A +L  EM    + P                       
Sbjct: 259 PPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGP----------------------- 295

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
                       D+V YNI+IDGY K G +  A++L+ ++ +  + P   +++++I   C
Sbjct: 296 ------------DIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLC 343

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           + GKV  A  +   +  +G  P A      +   C    +     L Q M      P   
Sbjct: 344 RAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIP 403

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
            Y +++  LCK  +  +  ++  ++   G +PD      I+ +  +  D
Sbjct: 404 EYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDD 452



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 169/373 (45%), Gaps = 20/373 (5%)

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDS 333
           ++Y+ L+  L K  +       YN+M +    PN++ +G +L  LC+ +   EAR  F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 334 LIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGK 393
           +    C  +V  Y+I+I G  +   + EA +L  ++I+    P++VT+ SL+ G CK GK
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 394 VADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTV 453
           + +A  L   +   G  P  V Y   ++ + ++G++     L +EM  K   PT  TY  
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 454 VIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHN 513
           ++ G  ++ +      L +DM   G  P+  T+N ++  FCK  D+ +A +L  +M    
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 514 LEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAM 573
             P   +YN LI G+C  G    A  LL  +    +    V+Y  +I  +   G +  A+
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 574 TFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAV 633
             F ++ + G E     Y+    C+                     + G +G+ F +   
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLC--------------------RAGKVGAAFVVFKD 357

Query: 634 MIKSGLLPDKFLI 646
           MI +G  PD  ++
Sbjct: 358 MIANGSAPDAAVV 370



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 138/290 (47%), Gaps = 3/290 (1%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVSETPRN 62
           +S+ G + +A  +  +M E     ++ TYNSLL           +  L+ D+       N
Sbjct: 167 FSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           ++T + ++DG C+   + +A     E       P VVS N ++   C  G    A+ L  
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLR 286

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            M++ G+ PD  SYNILI G   +G+++ A++   ++ + G+EPDA +YS +        
Sbjct: 287 EMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
           ++  A+ V + ++  GS PD      L+ G C+   + E  +L + M+       +  Y+
Sbjct: 347 KVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYN 406

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           +L+  +CK+ R D+   + +E+   G  PD+    +++  L + D    A
Sbjct: 407 LLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAA 456



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 20/199 (10%)

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           ++Y  +++ L K  +         DM   G  P+  TY  ++RS C+ +   +A  +   
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M      P   +Y+ILI GLC    +  A  LL  + +       V Y +++   C  G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 569 VHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
           + +A+  F +MV +G             C       PPD  +  V++  F + GD+G  +
Sbjct: 138 LKEAVDLFSRMVYRG-------------C-------PPDGVVYNVLIDGFSKKGDMGEAY 177

Query: 629 ELAAVMIKSGLLPDKFLIN 647
            L   M++ G +P  F  N
Sbjct: 178 RLFEEMLEKGCIPTVFTYN 196


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 225/483 (46%), Gaps = 43/483 (8%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P    L  ++ + C      VA  +   +++ G   DA S N L+  L     ++   E 
Sbjct: 244 PDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNEL 303

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGS------DPDIVTYTVL 209
             +M +  + P  +T+ IL        +I  A +V  +L  KG       +PD+V +  L
Sbjct: 304 LAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTL 363

Query: 210 ICGYCQIGNVEEGLKLREVM-LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           I G C++G  E+GL L E M +    + N + Y+ L+    K+G  D A  L  +M   G
Sbjct: 364 IDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEG 423

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           ++P+++T + L+ GLCK  +VH+A++ +NEM  K +  N+  + A++   C    I  A 
Sbjct: 424 VQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAM 483

Query: 329 MYFDSLIMSNCIQDVVL-----------------------------------YNIMIDGY 353
             F+ ++ S C  D V+                                   YN++I G+
Sbjct: 484 QCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGF 543

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K   +    +L  ++ E  + P  +T+N+LI    K G  A A ++++ +   GL PS 
Sbjct: 544 CKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSV 603

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
           VTY   ++AYC + N+   + +  EM  T  + P  V Y ++I  LC+   +  A+ L+E
Sbjct: 604 VTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLME 663

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           DM V  V P+  TYN I++     K L KAF+L+++M      P   T  +L + L   G
Sbjct: 664 DMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVG 723

Query: 533 DLK 535
           +++
Sbjct: 724 EIE 726



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 243/523 (46%), Gaps = 14/523 (2%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA----EVAKGLFCLMLKYG 128
           L +  R  DA+  L E      G SV     +     + G +    EV  GL   + + G
Sbjct: 184 LLKSGRAGDALHVLDEMPQANSGFSVTG-EIVFGELVRSGRSFPDGEVV-GLVAKLGERG 241

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + PD F    L+  LC       A E  + + R G   DA + + L         I    
Sbjct: 242 VFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMN 301

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG------FKLNVIAYS 242
           +++ ++  +   P +VT+ +L+   C+   ++E L++ + +  +G       + +V+ ++
Sbjct: 302 ELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFN 361

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGL-KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            L+  +CK G+ ++ L LL EM+   + +P+ VTY+ LI G  K     +A +L+ +M  
Sbjct: 362 TLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNE 421

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + + PN      ++ GLC+   +  A  +F+ +       +   Y  +I  +  + NI  
Sbjct: 422 EGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINR 481

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+Q + +++    SP  V + SLI G C  G++ DA  ++  +KL G       Y   ++
Sbjct: 482 AMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLIS 541

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
            +C++  ++R+  LL EME   + P  +TY  +I  L K      A +++E M   G+ P
Sbjct: 542 GFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRP 601

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQM-WLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
             +TY  II ++C  K++ +  ++  +M     + P +  YNILID LC N D+  A  L
Sbjct: 602 SVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISL 661

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +  ++   +      Y  I+K    +  +HKA     +MVE+ 
Sbjct: 662 MEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEA 704



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 211/427 (49%), Gaps = 13/427 (3%)

Query: 18  VIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIK-------VSETPRNVYTNS 67
           ++A+M++  ++ S+ T+  L+ +L   R  D    ++D ++       V   P  V  N+
Sbjct: 303 LLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNT 362

Query: 68  IVIDGLCQQSRLQDAILFLQETA-GKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + IDGLC+  + +D +  L+E   G    P+ V+ N ++  + K G  + A  LF  M +
Sbjct: 363 L-IDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNE 421

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G+ P+  + N L+ GLC  G +  A+EF N+M   G++ +A TY+ L   F  ++ I+ 
Sbjct: 422 EGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINR 481

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A +  +++L  G  PD V Y  LI G C  G + +   +   +   GF L+   Y+VL+S
Sbjct: 482 AMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLIS 541

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             CK  +++    LL EME  G+KPD +TY+ LI  L K      A ++  +M  + + P
Sbjct: 542 GFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRP 601

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLI-MSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           +   +GAI+   C K+ + E    F  +   S    + V+YNI+ID   +  ++  A+ L
Sbjct: 602 SVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISL 661

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
              +  KR+ P+  T+N+++ G      +  A  L+D +      P  +T          
Sbjct: 662 MEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSA 721

Query: 426 EGNIQRL 432
            G I++L
Sbjct: 722 VGEIEKL 728



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 215/455 (47%), Gaps = 11/455 (2%)

Query: 29  VSIQTYNSLLYNL-RHTDI--MWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILF 85
           V   + N+LL  L R  DI  M +L  +++  +   +V T  I+++ LC+  R+ +A+  
Sbjct: 279 VDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQV 338

Query: 86  LQETAGKEFG------PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH-PDAFSYNI 138
                GK         P VV  N ++   CK+G  E    L   M    ++ P+  +YN 
Sbjct: 339 FDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNC 398

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           LI G   AG+ + A E    M   GV+P+ IT + L  G     ++  A +   ++  KG
Sbjct: 399 LIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKG 458

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
              +  TYT LI  +C + N+   ++  E MLS G   + + Y  L+S +C +GR+++A 
Sbjct: 459 LKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDAS 518

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            ++ +++  G   D   Y++LI G CK+ K+ +  +L  EM    + P++  +  ++  L
Sbjct: 519 VVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYL 578

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE-KRISPS 377
            +      A    + +I       VV Y  +I  Y    N+ E ++++ ++    ++ P+
Sbjct: 579 GKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPN 638

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ 437
            V +N LI   C+N  V  A  L++ +K+  + P+  TY   +    ++  + +   L+ 
Sbjct: 639 TVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMD 698

Query: 438 EMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
            M  +A  P ++T  V+ + L    ++++    +E
Sbjct: 699 RMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVE 733



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 193/442 (43%), Gaps = 28/442 (6%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           +   GFKL     + L+  +C   +   A  +L+ +  +G   D  + + L+  L +   
Sbjct: 242 VFPDGFKL-----TQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRD 296

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM---SNCI---QD 342
           + +  +L  EM  ++I P+    G ++  LC+   I EA   FD L     SN +    D
Sbjct: 297 IKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPD 356

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS-PSIVTFNSLIYGFCKNGKVADARRLL 401
           VVL+N +IDG  K+G   + + L  ++    I+ P+ VT+N LI GF K G    A  L 
Sbjct: 357 VVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELF 416

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQ 461
             +   G++P+ +T  T ++  C+ G + R +    EM+ K +     TYT +I   C  
Sbjct: 417 RQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGV 476

Query: 462 WKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
             +  A+Q  E+M   G +PD + Y ++I   C    +  A  +++++ L       + Y
Sbjct: 477 NNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCY 536

Query: 522 NILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVE 581
           N+LI G C    L+    LL  ++E  +    + Y T+I      GD   A     +M++
Sbjct: 537 NVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIK 596

Query: 582 KGFEISIRDY----------------TKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
           +G   S+  Y                 K F  M  ++  PP+  I  +++ A  +  D+ 
Sbjct: 597 EGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVD 656

Query: 626 SVFELAAVMIKSGLLPDKFLIN 647
               L   M    + P+    N
Sbjct: 657 RAISLMEDMKVKRVRPNTTTYN 678



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 134/301 (44%), Gaps = 33/301 (10%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           + G VH AV    +MK   LK +  TY +L                              
Sbjct: 440 KHGRVHRAVEFFNEMKGKGLKGNAATYTAL------------------------------ 469

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
             I   C  + +  A+   +E       P  V   +++S  C  G    A  +   +   
Sbjct: 470 --ISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLA 527

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G   D   YN+LI G C    +E   E   +M   GV+PD ITY+ L          + A
Sbjct: 528 GFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATA 587

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG-FKLNVIAYSVLLS 246
            KV++K++ +G  P +VTY  +I  YC   NV+EG+K+   M S      N + Y++L+ 
Sbjct: 588 SKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILID 647

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
           ++C++  +D A+ L+ +M+   ++P+  TY+ +++G+  +  +HKA +L + M  +   P
Sbjct: 648 ALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRP 707

Query: 307 N 307
           +
Sbjct: 708 D 708



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 158/358 (44%), Gaps = 28/358 (7%)

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           + S+L++ L     V+ ++ L+N++     SP    HG +L  L +     +A    D +
Sbjct: 143 SASLLLQCLENARLVNDSLLLFNQLDPSSKSPQ-LCHG-LLRVLLKSGRAGDALHVLDEM 200

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNI---GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKN 391
             +N    V    I+    V+ G     GE V L  +L E+ + P       L+   C +
Sbjct: 201 PQANSGFSVT-GEIVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGD 259

Query: 392 GKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
            K   A  +L  +   G    A +    +       +I+R+  LL EME + I P+ VT+
Sbjct: 260 QKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTF 319

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMY------VIGVTPDQITYNTIIRSFCKCKDLRKAFQL 505
            +++  LCK  ++ EA+Q+ + +        +GV PD + +NT+I   CK         L
Sbjct: 320 GILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSL 379

Query: 506 LNQMWLHNL-EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           L +M + N+  P + TYN LIDG    G+   A  L   + E  +    +   T++   C
Sbjct: 380 LEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLC 439

Query: 565 AEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC-------------MMLSNGFPPD 607
             G VH+A+ FF +M  KG + +   YT   S FC              MLS+G  PD
Sbjct: 440 KHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPD 497



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 4/152 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDI-KVSETPRNV 63
           +TG    A  V+ KM +  L+ S+ TY ++++   + ++ D    ++ ++   S+ P N 
Sbjct: 580 KTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNT 639

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
              +I+ID LC+ + +  AI  +++   K   P+  + NAI+           A  L   
Sbjct: 640 VIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDR 699

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           M++    PD  +  +L   L   G +E+   F
Sbjct: 700 MVEEACRPDYITMEVLTEWLSAVGEIEKLKHF 731


>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
 gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
          Length = 784

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 268/554 (48%), Gaps = 6/554 (1%)

Query: 5   VYSRTGMV-HDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSE-T 59
           VYS+  +   + V ++A MKE  +     TYN+L+   R   +  +   ++D++K S   
Sbjct: 216 VYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFE 275

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P  V  NS+ +D   +  R  +AI  +QE       PSVV+ N+++S Y K G  E A  
Sbjct: 276 PDKVTFNSL-LDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVA 334

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M   G+ PD  +Y  LI GL  AG ++ A+   ++M R+G +P+  TY+ L K   
Sbjct: 335 LKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHG 394

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           +  +      V  +    G  PDIVT+  L+  + Q G   E   + + M   G+     
Sbjct: 395 VRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERD 454

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y  L+SS  + G  D A+ +   M   G+ PD+ TY+ ++  L +  +  +A +L+ EM
Sbjct: 455 TYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEM 514

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             +   P+ +++ ++L      + + + +   D +          L   ++    K+ N+
Sbjct: 515 EERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNL 574

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA + + +L +KR S  I   N+++  + KN  V    ++L  +K   +  SA TY + 
Sbjct: 575 AEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSL 634

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           M+ Y   G+ ++   +L E+++  + P   +Y  VI    ++ +++EA +L  +M   G+
Sbjct: 635 MHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGL 694

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD +TYN  ++S+       +A +L+  M     +P   TYN +++G C NG L +A  
Sbjct: 695 KPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKI 754

Query: 540 LLVSLQEHNISLTK 553
            + +L + +   +K
Sbjct: 755 FVSNLPQLHPGYSK 768



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/562 (23%), Positives = 253/562 (45%), Gaps = 40/562 (7%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +  I  + +  RL +A   L    G + G    +  A++S + + G    A  +F  M+ 
Sbjct: 145 ATAIRVMARAGRLAEASALLDAAPGPDAG----AYTALVSAFSRAGRFRDAVAVFRRMVD 200

Query: 127 YGLHPDAFSYNILIHGLC-IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
            G+ P   +YN+++H    +A   +E +E    M  HGV PD  TY+ L       +   
Sbjct: 201 SGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYK 260

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A +V  ++   G +PD VT+  L+  Y +    +E +++ + M   G   +V+ Y+ L+
Sbjct: 261 EAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLI 320

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           SS  K G +++A+ L  EME  G+KPD+VTY+ LI GL +  K+  AI  Y+EM      
Sbjct: 321 SSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCK 380

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI----------------- 348
           PN   + A++     +    E    FD    +  + D+V +N                  
Sbjct: 381 PNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGV 440

Query: 349 ------------------MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
                             +I  Y + G    A+Q+Y++++E  I P + T+N+++    +
Sbjct: 441 FKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALAR 500

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G+   A +L   ++    +P   +Y++ ++AY     + ++ AL  ++ ++ I P +  
Sbjct: 501 GGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWL 560

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
              ++    K   L EA +   ++     + D    N ++  + K + +RK  ++L+ M 
Sbjct: 561 VKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMK 620

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              +  ++ATYN L+      GD +  + +L  ++   +   + +Y T+I A+  +G + 
Sbjct: 621 ESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMK 680

Query: 571 KAMTFFCQMVEKGFEISIRDYT 592
           +A   F +M   G +  +  Y 
Sbjct: 681 EASRLFSEMKCSGLKPDVVTYN 702



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 132/594 (22%), Positives = 263/594 (44%), Gaps = 43/594 (7%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG--FAEVAKGLFCLM 124
           + ++    +  R +DA+   +        P++V+ N ++  Y K+   + EV + L   M
Sbjct: 176 TALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE-LVASM 234

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            ++G+ PD ++YN LI         +EA +  ++M   G EPD +T++ L   +    + 
Sbjct: 235 KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRH 294

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +VIQ++   G  P +VTY  LI  Y + G +E+ + L++ M  +G K +V+ Y+ L
Sbjct: 295 DEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTL 354

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +S + ++G+ID A+    EM   G KP+L TY+ LI+    + K  + + +++E  S   
Sbjct: 355 ISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGF 414

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+      +L    +  + +E    F  +  +  I +   Y  +I  Y + G    A+Q
Sbjct: 415 VPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQ 474

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +Y++++E  I P + T+N+++    + G+   A +L   ++    +P   +Y++ ++AY 
Sbjct: 475 IYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYA 534

Query: 425 EEGNIQRLLALLQEMETKAIGP------THVTYTVVIKGLCKQWK--------------- 463
               + ++ AL  ++ ++ I P      T V     +  L +  K               
Sbjct: 535 NAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDIN 594

Query: 464 --------------LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
                         +++  ++L  M    +     TYN+++  + +  D  K   +L ++
Sbjct: 595 VLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEI 654

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               + P   +YN +I      G +K A  L   ++   +    V Y   +K++ +    
Sbjct: 655 KSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMF 714

Query: 570 HKAMTFFCQMVEKGFEISIRDYTK--SFFCMMLSNGFPPDQEICEVMLIAFHQG 621
            +A+     MV +G + + R Y      +C    NG   D +I    L   H G
Sbjct: 715 EEAIELVRYMVTQGCKPNERTYNSIVEGYC---RNGKLTDAKIFVSNLPQLHPG 765


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 200/402 (49%), Gaps = 7/402 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEV---AKGLFCLMLKYGLHPDAFSYNILIH--GLCIAGSME 150
           PSV    AI +   K G       A GL   M  +   PD  SYN ++    LC +G  +
Sbjct: 187 PSVCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTD 246

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           ++++  N++   G+ P  ITY+ +  G+    Q+  A++   K++ K   PD+ T  +L+
Sbjct: 247 QSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILL 306

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G C  G ++  LKL    +S+G  ++ + Y+ ++S +CK GR +EA  LL EME   L 
Sbjct: 307 RGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLG 366

Query: 271 PDLVTYSILIRGLCKQD-KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           PD  TY+ ++  L   + +V KA Q  N+M  K   P+ F    +L GLC + M+  A  
Sbjct: 367 PDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALK 426

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR-ISPSIVTFNSLIYGF 388
            F++ I      D V YN +I G  K G   EA  L  ++ EK  + P   T+N++I G+
Sbjct: 427 LFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGY 486

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C+ G+V  A +  + +     +P   T    +   C EG + + L L     +K      
Sbjct: 487 CREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDA 546

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
           VTY  +I GLCK+ + +EA  LL +M    + PD  TYN I+
Sbjct: 547 VTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAIL 588



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 197/397 (49%), Gaps = 21/397 (5%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMW------------DLYDDIKVSET 59
           + +A+ +I KMK+        +YN++L      D++W             L + ++    
Sbjct: 208 LSEAIGLIGKMKDFSCFPDNASYNTIL------DVLWLCRSGKTDQSIDKLNELLESGLV 261

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P  +  N+I I G C++ +++ A  F  +   K F P + + N ++   C  G  + A  
Sbjct: 262 PHQITYNTI-IHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALK 320

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITY-SILAKGF 178
           LF   +  G   DA +YN +I GLC  G  EEA +   +M    + PD  TY +IL    
Sbjct: 321 LFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALA 380

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               Q+  A++   K++ K   PD+ T  +L+ G C  G ++  LKL    +S+G  ++ 
Sbjct: 381 DAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDA 440

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAV-GLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           + Y+ ++S +CK GR +EA  LL EME   GL PD  TY+ +I G C++ +V KA Q  N
Sbjct: 441 VTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRN 500

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           +M  K   P+ F    +L GLC + M+ +A   F++ I      D V YN +I G  K G
Sbjct: 501 KMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEG 560

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
              EA  L  ++ EK++ P   T+N+++      G++
Sbjct: 561 RFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRM 597



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 225/468 (48%), Gaps = 20/468 (4%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
            Y      H A  +  +MK L LK ++ T N+L+  L    + +     + +S+    ++
Sbjct: 144 AYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINAL----VRYPSKPSVCLSKA---IF 196

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMS--RYCKLGFAEVAKGLFC 122
           TN I   G+  +++L +AI  + +       P   S N I+     C+ G  + +     
Sbjct: 197 TNVIKF-GV--KNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLN 253

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            +L+ GL P   +YN +IHG C  G +E+A +F N M     +PD  T +IL +G     
Sbjct: 254 ELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEG 313

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A K+    + KG   D VTY  +I G C+ G  EE   L   M  +    +   Y+
Sbjct: 314 MLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYN 373

Query: 243 VLLSSMCKS-GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
            +L ++  + G++++A     +M     KPDL T +IL+RGLC +  +  A++L+N   S
Sbjct: 374 AILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWIS 433

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLI----MSNCIQDVVLYNIMIDGYVKLG 357
           K  + ++  +  I+ GLC++    EA   FD L      +  + D   YN +I GY + G
Sbjct: 434 KGKAIDAVTYNTIISGLCKEGRFEEA---FDLLAEMEEKNGLVPDQTTYNTIILGYCREG 490

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + +A Q   +++EK   P + T N L+ G C+ G +  A +L +T    G    AVTY 
Sbjct: 491 QVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYN 550

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
           T ++  C+EG  +    LL EM+ K +GP   TY  ++  L    +++
Sbjct: 551 TIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRME 598



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 167/337 (49%), Gaps = 2/337 (0%)

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +C+SG+ D+++  L E+   GL P  +TY+ +I G C++ +V KA Q  N+M  K   P+
Sbjct: 239 LCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPD 298

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
            F    +L GLC + M+  A   F++ I      D V YN +I G  K G   EA  L  
Sbjct: 299 LFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLA 358

Query: 368 QLIEKRISPSIVTFNSLIYGFCK-NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           ++ EK++ P   T+N+++       G+V  A +  + +     +P   T    +   C E
Sbjct: 359 EMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTE 418

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI-GVTPDQIT 485
           G +   L L     +K      VTY  +I GLCK+ + +EA  LL +M    G+ PDQ T
Sbjct: 419 GMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTT 478

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           YNTII  +C+   + KAFQ  N+M   + +P   T NIL+ GLC  G L  A  L  +  
Sbjct: 479 YNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWI 538

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
               ++  V Y TII   C EG   +A     +M EK
Sbjct: 539 SKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEK 575



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 193/438 (44%), Gaps = 43/438 (9%)

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK----------------------QDKV 289
            R   A  +   M+ + LKP+L+T + LI  L +                      ++K+
Sbjct: 149 NRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKL 208

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAIL--LGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
            +AI L  +M      P++ ++  IL  L LC      ++    + L+ S  +   + YN
Sbjct: 209 SEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYN 268

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I GY + G + +A Q   +++EK   P + T N L+ G C  G + +A +L +T    
Sbjct: 269 TIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISK 328

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK-QWKLQE 466
           G    AVTY T ++  C+EG  +    LL EME K +GP   TY  ++  L   + ++++
Sbjct: 329 GKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEK 388

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSA-TYNILI 525
           A Q    M      PD  T N ++R  C    L  A +L N  W+   +   A TYN +I
Sbjct: 389 AFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFN-TWISKGKAIDAVTYNTII 447

Query: 526 DGLCVNGDLKNADCLLVSLQEHN-ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
            GLC  G  + A  LL  ++E N +   +  Y TII  +C EG V KA  F  +MVEK F
Sbjct: 448 SGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSF 507

Query: 585 E-------ISIRDYTK--------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
           +       I +R   +          F   +S G   D      ++    + G     F+
Sbjct: 508 KPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFD 567

Query: 630 LAAVMIKSGLLPDKFLIN 647
           L A M +  L PD +  N
Sbjct: 568 LLAEMKEKKLGPDCYTYN 585



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 132/325 (40%), Gaps = 37/325 (11%)

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V+ +  I  YV       A Q++ ++    + P+++T N+LI    +             
Sbjct: 136 VILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVR------------- 182

Query: 404 IKLHGLEPSA-VTYTTFMNA--YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK--GL 458
              +  +PS  ++   F N   +  +  +   + L+ +M+  +  P + +Y  ++    L
Sbjct: 183 ---YPSKPSVCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWL 239

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
           C+  K  +++  L ++   G+ P QITYNTII  +C+   + KAFQ  N+M   + +P  
Sbjct: 240 CRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDL 299

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            T NIL+ GLC  G L NA  L  +      ++  V Y TII   C EG   +A     +
Sbjct: 300 FTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAE 359

Query: 579 MVEKGFEISIRDYTK----------------SFFCMMLSNGFPPDQEICEVMLIAFHQGG 622
           M EK        Y                   F   M+   F PD   C ++L      G
Sbjct: 360 MEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEG 419

Query: 623 DLGSVFELAAVMIKSGLLPDKFLIN 647
            L +  +L    I  G   D    N
Sbjct: 420 MLDNALKLFNTWISKGKAIDAVTYN 444


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/531 (26%), Positives = 262/531 (49%), Gaps = 12/531 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL-----RHTDIMWDLYDDIKVSETP 60
           Y  +G+   A+ +  ++KE   K +++ YN LL  L         ++  +Y++++     
Sbjct: 118 YKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGME 177

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            NV+T ++++  LC+  +L  A   L E + +   P  VS   +++  C+ G  E A+ +
Sbjct: 178 PNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREV 237

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
                ++G        N LI GLC  G + E     ++M  +GV+P+ ++YS +      
Sbjct: 238 ---ARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSD 294

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           + ++  A  V+ K++ +G  P++ T++ L+ GY   G V EG+ L  VM+ +G + NV+ 
Sbjct: 295 VGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVV 354

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGL-KPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           Y+ LL+ +C SG + EA+ +   ME     +P++ TYS L+ G  K   +  A +++N+M
Sbjct: 355 YNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKM 414

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            +  + PN   + +++  LC+  M  +A    D++    C   VV +N  I G    G +
Sbjct: 415 VNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRV 474

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A+++  Q+      P   T+N L+ G     ++ +A  L+  ++   +E + VTY T 
Sbjct: 475 LWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTV 534

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG- 478
           M  +   G  + +L +L  M    + P  +T  VVI    K  K++ A+Q L D    G 
Sbjct: 535 MYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFL-DRITAGK 593

Query: 479 -VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
            + PD I + +++   C    + +A   LN+M    + P  AT+++L+ G 
Sbjct: 594 ELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGF 644



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 240/482 (49%), Gaps = 16/482 (3%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G+ P+ F+YN+L+  LC  G ++ A +   +M + G  PD ++Y+ +        +
Sbjct: 171 MRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGR 230

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A +V ++    G++  +     LICG C+ G V E   L + M+  G   NV++YS 
Sbjct: 231 VEEAREVARRF---GAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSS 287

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++S +   G ++ AL +L +M   G +P++ T+S L++G     +V + + L+  M  + 
Sbjct: 288 VISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEG 347

Query: 304 ISPNSFAHGAILLGLCEKEMITEA-----RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           + PN   +  +L GLC    + EA     RM  D      C  +V  Y+ ++ G+VK G+
Sbjct: 348 VRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCF----CRPNVTTYSTLVHGFVKAGD 403

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
           +  A +++ +++   + P++V + S++   CKN     A RL+D +   G  P+ VT+ T
Sbjct: 404 LQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNT 463

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
           F+   C  G +   + ++ +M+     P   TY  ++ GL    +L+EA +L+ ++    
Sbjct: 464 FIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERK 523

Query: 479 VTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNAD 538
           V  + +TYNT++  F          Q+L +M ++ ++P + T N++I      G ++ A 
Sbjct: 524 VELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAI 583

Query: 539 CLLVSLQE-HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY---TKS 594
             L  +     +    +A+T+++   C    + +A+ +  +M+ KG   +I  +    + 
Sbjct: 584 QFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRG 643

Query: 595 FF 596
           FF
Sbjct: 644 FF 645



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 150/617 (24%), Positives = 275/617 (44%), Gaps = 68/617 (11%)

Query: 30  SIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           +++   ++LY L+H      L + +    TP    T  ++I+ L + S L      L + 
Sbjct: 46  ALRREPNVLYALQHFQY---LTNTLAFKHTP---LTYHVMIEKLGRNSELDALHYILHQM 99

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             +    S  S   +++ Y   G  + A  +F  + ++G  P    YN L+  L      
Sbjct: 100 KIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGN 159

Query: 150 EEAL--EFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
           +  +      +M   G+EP+  TY++L K      ++ GA K++ ++  +G  PD V+YT
Sbjct: 160 KFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYT 219

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
            ++   C+ G VEE    REV    G +  V   + L+  +C+ GR+ E  GL+ EM   
Sbjct: 220 TVVAAMCEDGRVEEA---REVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGN 276

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G+ P++V+YS +I  L    +V  A+ +  +M  +   PN                    
Sbjct: 277 GVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPN-------------------- 316

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
                          V  ++ ++ GY   G +GE V L+R ++ + + P++V +N+L+ G
Sbjct: 317 ---------------VHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNG 361

Query: 388 FCKNGKVADARRLLDTIKLHGL-EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
            C +G +A+A  +   ++      P+  TY+T ++ + + G++Q    +  +M    + P
Sbjct: 362 LCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRP 421

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             V YT ++  LCK     +A +L+++M   G  P  +T+NT I+  C    +  A +++
Sbjct: 422 NVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVV 481

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
           +QM  +   P + TYN L+DGL    +LK A  L+  L+E  + L  V Y T++    + 
Sbjct: 482 DQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSH 541

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
           G                      ++       ML NG  PD     V++ A+ + G + +
Sbjct: 542 GK--------------------EEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRT 581

Query: 627 VFE-LAAVMIKSGLLPD 642
             + L  +     L PD
Sbjct: 582 AIQFLDRITAGKELCPD 598



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 149/302 (49%), Gaps = 11/302 (3%)

Query: 9   TGMVHDAVFVIAKM-KELDLKVSIQTYNSLLY------NLRHTDIMWDLYDDIKVSETPR 61
           +G + +AV V  +M K+   + ++ TY++L++      +L+    +W+   +  V     
Sbjct: 365 SGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRP--- 421

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           NV   + ++D LC+ S    A   +   A     P+VV+ N  +   C  G    A  + 
Sbjct: 422 NVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVV 481

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M +YG  PD  +YN L+ GL     ++EA E   ++    VE + +TY+ +  GF   
Sbjct: 482 DQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSH 541

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK-LREVMLSQGFKLNVIA 240
            +     +V+ ++L+ G  PD +T  V+I  Y ++G V   ++ L  +   +    ++IA
Sbjct: 542 GKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIA 601

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           ++ LL  +C S  I+EA+  L +M   G+ P++ T+ +L+RG  K+      I++ +++ 
Sbjct: 602 HTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKKLGHMGPIRILDDIL 661

Query: 301 SK 302
            K
Sbjct: 662 GK 663



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 4/193 (2%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVYTN 66
           G V  A+ V+ +M+        +TYN LL   +++       +L  +++  +   N+ T 
Sbjct: 472 GRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTY 531

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA-KGLFCLML 125
           + V+ G     + +  +  L         P  +++N ++  Y KLG    A + L  +  
Sbjct: 532 NTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITA 591

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
              L PD  ++  L+ G+C +  +EEA+ + N M   G+ P+  T+ +L +GF       
Sbjct: 592 GKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKKLGHM 651

Query: 186 GAWKVIQKLLIKG 198
           G  +++  +L KG
Sbjct: 652 GPIRILDDILGKG 664


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 217/427 (50%), Gaps = 1/427 (0%)

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
           ++M   GV PD+ TY  +  G+     +  A + I +++ +G   D  T T++I  +C+ 
Sbjct: 233 DEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEK 292

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
             V   +     +   G   N+I YS ++S +CK G + +A  LL EM   G KP++ T+
Sbjct: 293 SLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTH 352

Query: 277 SILIRGLCKQDKVHKAIQLYNEMC-SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           + LI GLCK+    +A +L+ ++  S    PN   + A++ G C++E ++ A M F+ + 
Sbjct: 353 TSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMK 412

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
               + +   Y  +IDG+ K GN  +A +L   +  +   P+  T+NS++ G CK G+  
Sbjct: 413 EQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAE 472

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +A +LL+T   + +E   VTYT  ++  C+  ++ + L  L +M      P    YT +I
Sbjct: 473 EAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLI 532

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
              C+Q  ++++ +L +++  +G+ P + TY ++I  +C+ K +  A +   +M  H   
Sbjct: 533 AAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCA 592

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P S +Y  LI GLC    L  A  L  ++ +  +S  +V   T+   +C   D   AM  
Sbjct: 593 PDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVI 652

Query: 576 FCQMVEK 582
             ++ +K
Sbjct: 653 LERLNKK 659



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 236/499 (47%), Gaps = 5/499 (1%)

Query: 86  LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
             E + +   P   +   I+  YC+ G    A    C M++ G   D  +  ++I   C 
Sbjct: 232 FDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCE 291

Query: 146 AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
              +  A+ F + + + G+ P+ I YS +  G      +  A++++++++  G  P++ T
Sbjct: 292 KSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYT 351

Query: 206 YTVLICGYCQIGNVEEGLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           +T LI G C+ G  E   +L  +++ S  +K NV  Y+ ++S  CK  ++  A  L   M
Sbjct: 352 HTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERM 411

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           +  GL P+  TY+ LI G CK     KA +L   M ++   PN+  + +I+ GLC++   
Sbjct: 412 KEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRA 471

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            EA    ++   +    D V Y I+I    K  ++ +A+    ++ +    P I  + +L
Sbjct: 472 EEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTL 531

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I  FC+   + D+ +L D +   GL P+  TYT+ +  YC E  +   +   Q+M     
Sbjct: 532 IAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGC 591

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P  ++Y  +I GLCK+ +L EA QL + M   G++P ++T  T+   +CK +D   A  
Sbjct: 592 APDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMV 651

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           +L ++   N +    T + LI  LC    +  A      L +  +++ +V       A C
Sbjct: 652 ILERL---NKKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTA-C 707

Query: 565 AEGDVHKAMTFFCQMVEKG 583
            E + +  ++   + + KG
Sbjct: 708 IESNKYALVSDLSERISKG 726



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 232/478 (48%), Gaps = 12/478 (2%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPR 61
           V++  G + +AV +I  M+   L ++ +  N ++     +R  +   +++D++    + R
Sbjct: 183 VFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEM----SAR 238

Query: 62  NVYTNSI----VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            VY +S     +I G C+   + +A  ++ E   + F     +L  I++ +C+      A
Sbjct: 239 GVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRA 298

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              F  + K GL P+  +Y+ +I GLC  GS+++A E   +M ++G +P+  T++ L  G
Sbjct: 299 VWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHG 358

Query: 178 FHLLSQISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
                    A+++  KL+   +  P++ TYT +I GYC+   +     L E M  QG   
Sbjct: 359 LCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVP 418

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N   Y+ L+   CK+G   +A  L+  M   G  P+  TY+ ++ GLCK+ +  +A +L 
Sbjct: 419 NTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLL 478

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           N     +I  +   +  ++   C++  + +A ++ + +       D+ LY  +I  + + 
Sbjct: 479 NTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQ 538

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
             + ++ +L+ ++I+  ++P+  T+ S+I G+C+  KV+ A +    +  HG  P +++Y
Sbjct: 539 NMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISY 598

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
              ++  C+E  +     L   M  K + P  VT   +    CK      A+ +LE +
Sbjct: 599 GALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL 656



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 201/445 (45%), Gaps = 16/445 (3%)

Query: 213 YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           + +IG ++E + +   M +QG  L     + ++    +   ++ A  +  EM A G+ PD
Sbjct: 184 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 243

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
             TY  +I G C+   V +A +   EM  +    ++     I+   CEK ++  A  +F 
Sbjct: 244 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 303

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +       +++ Y+ MI G  K G++ +A +L  ++++    P++ T  SLI+G CK G
Sbjct: 304 KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 363

Query: 393 KVADARRL-LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
               A RL L  I+    +P+  TYT  ++ YC+E  + R   L + M+ + + P   TY
Sbjct: 364 WTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTY 423

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
           T +I G CK     +A +L+E M   G  P+  TYN+I+   CK     +AF+LLN  + 
Sbjct: 424 TTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQ 483

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
           + +E    TY ILI   C   D+  A   L  + +         YTT+I A C +  +  
Sbjct: 484 NQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKD 543

Query: 572 AMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLI 616
           +   F ++++ G   +   YT                 FF  M  +G  PD      ++ 
Sbjct: 544 SEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALIS 603

Query: 617 AFHQGGDLGSVFELAAVMIKSGLLP 641
              +   L    +L   MI  GL P
Sbjct: 604 GLCKESRLDEARQLYDTMIDKGLSP 628



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 216/445 (48%), Gaps = 8/445 (1%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
            +    +V+ AV+   K+ ++ L  ++  Y+S++  L         ++L +++  +    
Sbjct: 288 AFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKP 347

Query: 62  NVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           NVYT++ +I GLC++   + A  LFL+      + P+V +  A++S YCK      A+ L
Sbjct: 348 NVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEML 407

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M + GL P+  +Y  LI G C AG+  +A E    M   G  P+  TY+ +  G   
Sbjct: 408 FERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCK 467

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +   A+K++        + D VTYT+LI   C+  ++ + L     M   GF+ ++  
Sbjct: 468 RGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHL 527

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+++ C+   + ++  L  E+  +GL P   TY+ +I G C++ KV  A++ + +M 
Sbjct: 528 YTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMS 587

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
               +P+S ++GA++ GLC++  + EAR  +D++I        V    +   Y K  +  
Sbjct: 588 DHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFA 647

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A+ +  +L +K     I T ++LI   C   KVA A      +    +    VT   F 
Sbjct: 648 SAMVILERLNKKLW---IRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAF- 703

Query: 421 NAYCEEGNIQRLLALLQEMETKAIG 445
           N  C E N   L++ L E  +K IG
Sbjct: 704 NTACIESNKYALVSDLSERISKGIG 728



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 190/393 (48%), Gaps = 21/393 (5%)

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           G++ EA+ ++ +M   GL       + +I    +   V  A  +++EM ++ + P+S  +
Sbjct: 188 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 247

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
             I++G C    + EA  +   ++    + D     ++I  + +   +  AV  + ++ +
Sbjct: 248 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 307

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
             +SP+++ ++S+I G CK G V  A  LL+ +  +G +P+  T+T+ ++  C++G  +R
Sbjct: 308 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTER 367

Query: 432 LLAL-LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
              L L+ + +    P   TYT +I G CK+ KL  A  L E M   G+ P+  TY T+I
Sbjct: 368 AFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLI 427

Query: 491 RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
              CK  +  KA++L+  M      P + TYN ++DGLC  G  + A  LL +  ++ I 
Sbjct: 428 DGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE 487

Query: 551 LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEI 610
              V YT +I   C   D+++A+ F  +M + GF+                    PD  +
Sbjct: 488 ADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQ--------------------PDIHL 527

Query: 611 CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
              ++ AF +   +    +L   +IK GL P K
Sbjct: 528 YTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTK 560



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 128/296 (43%), Gaps = 23/296 (7%)

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           M+  + ++G + EAV +   +  + +  +    N +I    +   V  A  + D +   G
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 239

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P + TY   +  YC  GN+      + EM  +     + T T++I   C++  +  AV
Sbjct: 240 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 299

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
                +  +G++P+ I Y+++I   CK   +++AF+LL +M  +  +P   T+  LI GL
Sbjct: 300 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 359

Query: 529 CVNGDLKNADCLLVSL-QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           C  G  + A  L + L +  N       YT +I  +C E  + +A   F +M E+G   +
Sbjct: 360 CKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPN 419

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH-QGGDLGSVFELAAVMIKSGLLPD 642
              YT                      LI  H + G+    +EL  +M   G  P+
Sbjct: 420 TNTYT---------------------TLIDGHCKAGNFSKAYELMELMSNEGFFPN 454


>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
          Length = 766

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 268/554 (48%), Gaps = 6/554 (1%)

Query: 5   VYSRTGMV-HDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSE-T 59
           VYS+  +   + V ++A MKE  +     TYN+L+   R   +  +   ++D++K S   
Sbjct: 198 VYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFE 257

Query: 60  PRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKG 119
           P  V  NS+ +D   +  R  +AI  +QE       PSVV+ N+++S Y K G  E A  
Sbjct: 258 PDKVTFNSL-LDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVA 316

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M   G+ PD  +Y  LI GL  AG ++ A+   ++M R+G +P+  TY+ L K   
Sbjct: 317 LKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHG 376

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
           +  +      V  +    G  PDIVT+  L+  + Q G   E   + + M   G+     
Sbjct: 377 VRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERD 436

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y  L+SS  + G  D A+ +   M   G+ PD+ TY+ ++  L +  +  +A +L+ EM
Sbjct: 437 TYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEM 496

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             +   P+ +++ ++L      + + + +   D +          L   ++    K+ N+
Sbjct: 497 EERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNL 556

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA + + +L +KR S  I   N+++  + KN  V    ++L  +K   +  SA TY + 
Sbjct: 557 AEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSL 616

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           M+ Y   G+ ++   +L E+++  + P   +Y  VI    ++ +++EA +L  +M   G+
Sbjct: 617 MHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGL 676

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            PD +TYN  ++S+       +A +L+  M     +P   TYN +++G C NG L +A  
Sbjct: 677 KPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKI 736

Query: 540 LLVSLQEHNISLTK 553
            + +L + +   +K
Sbjct: 737 FVSNLPQLHPGYSK 750



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 131/562 (23%), Positives = 253/562 (45%), Gaps = 40/562 (7%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +  I  + +  RL +A   L    G + G    +  A++S + + G    A  +F  M+ 
Sbjct: 127 ATAIRVMARAGRLAEASALLDAAPGPDAG----AYTALVSAFSRAGRFRDAVAVFRRMVD 182

Query: 127 YGLHPDAFSYNILIHGLC-IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
            G+ P   +YN+++H    +A   +E +E    M  HGV PD  TY+ L       +   
Sbjct: 183 SGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYK 242

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A +V  ++   G +PD VT+  L+  Y +    +E +++ + M   G   +V+ Y+ L+
Sbjct: 243 EAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLI 302

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           SS  K G +++A+ L  EME  G+KPD+VTY+ LI GL +  K+  AI  Y+EM      
Sbjct: 303 SSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCK 362

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI----------------- 348
           PN   + A++     +    E    FD    +  + D+V +N                  
Sbjct: 363 PNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGV 422

Query: 349 ------------------MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
                             +I  Y + G    A+Q+Y++++E  I P + T+N+++    +
Sbjct: 423 FKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALAR 482

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            G+   A +L   ++    +P   +Y++ ++AY     + ++ AL  ++ ++ I P +  
Sbjct: 483 GGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWL 542

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
              ++    K   L EA +   ++     + D    N ++  + K + +RK  ++L+ M 
Sbjct: 543 VKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMK 602

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
              +  ++ATYN L+      GD +  + +L  ++   +   + +Y T+I A+  +G + 
Sbjct: 603 ESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMK 662

Query: 571 KAMTFFCQMVEKGFEISIRDYT 592
           +A   F +M   G +  +  Y 
Sbjct: 663 EASRLFSEMKCSGLKPDVVTYN 684



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 132/594 (22%), Positives = 263/594 (44%), Gaps = 43/594 (7%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLG--FAEVAKGLFCLM 124
           + ++    +  R +DA+   +        P++V+ N ++  Y K+   + EV + L   M
Sbjct: 158 TALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE-LVASM 216

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            ++G+ PD ++YN LI         +EA +  ++M   G EPD +T++ L   +    + 
Sbjct: 217 KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRH 276

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A +VIQ++   G  P +VTY  LI  Y + G +E+ + L++ M  +G K +V+ Y+ L
Sbjct: 277 DEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTL 336

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +S + ++G+ID A+    EM   G KP+L TY+ LI+    + K  + + +++E  S   
Sbjct: 337 ISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGF 396

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+      +L    +  + +E    F  +  +  I +   Y  +I  Y + G    A+Q
Sbjct: 397 VPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQ 456

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           +Y++++E  I P + T+N+++    + G+   A +L   ++    +P   +Y++ ++AY 
Sbjct: 457 IYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYA 516

Query: 425 EEGNIQRLLALLQEMETKAIGP------THVTYTVVIKGLCKQWK--------------- 463
               + ++ AL  ++ ++ I P      T V     +  L +  K               
Sbjct: 517 NAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDIN 576

Query: 464 --------------LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
                         +++  ++L  M    +     TYN+++  + +  D  K   +L ++
Sbjct: 577 VLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEI 636

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               + P   +YN +I      G +K A  L   ++   +    V Y   +K++ +    
Sbjct: 637 KSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMF 696

Query: 570 HKAMTFFCQMVEKGFEISIRDYTK--SFFCMMLSNGFPPDQEICEVMLIAFHQG 621
            +A+     MV +G + + R Y      +C    NG   D +I    L   H G
Sbjct: 697 EEAIELVRYMVTQGCKPNERTYNSIVEGYC---RNGKLTDAKIFVSNLPQLHPG 747


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 235/490 (47%), Gaps = 13/490 (2%)

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           Y K   AE     F  M++ G  P   + NI++  L  +  M +A      M  HG+ P 
Sbjct: 215 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 274

Query: 168 AITY-SILAKGFHL--LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            IT+ ++L   F    L ++   W  +++  I+ S+   VTY +LI G+ + G +EE  +
Sbjct: 275 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSE---VTYNILINGFSKNGKMEEARR 331

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
               M   GF +   +++ L+   CK G  D+A G+  EM   G+ P   TY+I I  LC
Sbjct: 332 FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC 391

Query: 285 KQDKVHKAIQLYNEMCSKRI-SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
              ++  A +L + M +  + S N+  HG I +G        EA + FD L   +    +
Sbjct: 392 DFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMG-----KFVEASLLFDDLRAGDIHPSI 446

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V YN +IDG  + GN+  A +L  ++  + I P ++T+ +L+ GF KNG ++ A  + D 
Sbjct: 447 VTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDE 506

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQW 462
           +   G++P    YTT        G+  +   L +EM  T    P    Y V I GLCK  
Sbjct: 507 MLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVG 566

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            L +A++    ++ +G+ PD +TY T+IR + +    + A  L ++M    L P+  TY 
Sbjct: 567 NLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYF 626

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           +LI G    G L+ A      +++  +    + +  ++   C  G++ +A  + C+M E+
Sbjct: 627 VLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE 686

Query: 583 GFEISIRDYT 592
           G   +   YT
Sbjct: 687 GIPPNKYSYT 696



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 258/535 (48%), Gaps = 20/535 (3%)

Query: 4   FVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETP 60
           +VY++  M    +    KM       S++  N +L  LR + +M     +Y+ +      
Sbjct: 213 WVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIM 272

Query: 61  RNVYTNSIVIDGLCQQSRLQ--DAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
             V T + ++D   +   L+  D I    +    EF  S V+ N +++ + K G  E A+
Sbjct: 273 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEF--SEVTYNILINGFSKNGKMEEAR 330

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
                M + G     +S+N LI G C  G  ++A   T++M   G+ P   TY+I     
Sbjct: 331 RFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICAL 390

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
               +I  A    ++LL   + PD+V+Y  L+ GY ++G   E   L + + +     ++
Sbjct: 391 CDFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSI 446

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           + Y+ L+  +C+SG ++ A  L  EM    + PD++TY+ L++G  K   +  A ++Y+E
Sbjct: 447 VTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDE 506

Query: 299 MCSKRISPNSFAH-----GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           M  K I P+ +A+     G + LG  +K      R++ + +   +   D+ +YN+ IDG 
Sbjct: 507 MLRKGIKPDGYAYTTRAVGELRLGDSDKAF----RLHEEMVATDHHAPDLTIYNVRIDGL 562

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K+GN+ +A++  R++    + P  VT+ ++I G+ +NG+   AR L D +    L PS 
Sbjct: 563 CKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSV 622

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           +TY   +  + + G +++      EM+ + + P  +T+  ++ G+CK   + EA + L  
Sbjct: 623 ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCK 682

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           M   G+ P++ +Y  +I   C  +   +  +L  +M    +EP   T+  L   L
Sbjct: 683 MEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 737



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 210/435 (48%), Gaps = 5/435 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+V++ N ++    K G  E    ++  M +  +     +YNILI+G    G MEEA  F
Sbjct: 273 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 332

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             DM R G      +++ L +G+        AW V  ++L  G  P   TY + IC  C 
Sbjct: 333 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 392

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G +++  +L   M +     +V++Y+ L+    K G+  EA  L  ++ A  + P +VT
Sbjct: 393 FGRIDDARELLSSMAAP----DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 448

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI GLC+   +  A +L  EM ++ I P+   +  ++ G  +   ++ A   +D ++
Sbjct: 449 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 508

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE-KRISPSIVTFNSLIYGFCKNGKV 394
                 D   Y     G ++LG+  +A +L+ +++     +P +  +N  I G CK G +
Sbjct: 509 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 568

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
             A      I   GL P  VTYTT +  Y E G  +    L  EM  K + P+ +TY V+
Sbjct: 569 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 628

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I G  K  +L++A Q   +M   GV P+ +T+N ++   CK  ++ +A++ L +M    +
Sbjct: 629 IYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 688

Query: 515 EPTSATYNILIDGLC 529
            P   +Y +LI   C
Sbjct: 689 PPNKYSYTMLISKNC 703



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 228/492 (46%), Gaps = 49/492 (9%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYNSLLY------NLRHTDIMWDLYDDIKVSETPRNVY 64
           M++ A  V   M E  +  ++ T+N++L       +L   D +W    ++K      +  
Sbjct: 255 MMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWL---EMKRRNIEFSEV 311

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I+I+G  +  ++++A  F  +     F  +  S N ++  YCK G  + A G+   M
Sbjct: 312 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 371

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L  G++P   +YNI I  LC  G +++A E  + M      PD ++Y+ L  G+  + + 
Sbjct: 372 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKF 427

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +   L      P IVTY  LI G C+ GN+E   +L+E M +Q    +VI Y+ L
Sbjct: 428 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 487

Query: 245 LSSMCKSGRI-------DEAL-------GLLYEMEAVG---------------------- 268
           +    K+G +       DE L       G  Y   AVG                      
Sbjct: 488 VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDH 547

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
             PDL  Y++ I GLCK   + KAI+   ++    + P+   +  ++ G  E      AR
Sbjct: 548 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 607

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
             +D ++       V+ Y ++I G+ K G + +A Q   ++ ++ + P+++T N+L+YG 
Sbjct: 608 NLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGM 667

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           CK G + +A R L  ++  G+ P+  +YT  ++  C+    + ++ L +EM  K I P  
Sbjct: 668 CKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDG 727

Query: 449 VTYTVVIKGLCK 460
            T+  + K L K
Sbjct: 728 YTHRALFKHLEK 739



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 209/466 (44%), Gaps = 20/466 (4%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M R G  P     +I+ K       ++ A  V + ++  G  P ++T+  ++    + G+
Sbjct: 231 MIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD 290

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           +E   K+   M  +  + + + Y++L++   K+G+++EA     +M   G      +++ 
Sbjct: 291 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNP 350

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           LI G CKQ     A  + +EM +  I P +  +   +  LC+   I +AR     L+ S 
Sbjct: 351 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR----ELLSSM 406

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              DVV YN ++ GY+K+G   EA  L+  L    I PSIVT+N+LI G C++G +  A+
Sbjct: 407 AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ 466

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           RL + +    + P  +TYTT +  + + GN+     +  EM  K I P    YT    G 
Sbjct: 467 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGE 526

Query: 459 CKQWKLQEAVQLLEDMYVIGV-TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
            +     +A +L E+M       PD   YN  I   CK  +L KA +   +++   L P 
Sbjct: 527 LRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPD 586

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             TY  +I G   NG  K A  L   +    +  + + Y  +I  H   G + +A  +  
Sbjct: 587 HVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYST 646

Query: 578 QMVEKGFEISIR---------------DYTKSFFCMMLSNGFPPDQ 608
           +M ++G   ++                D    + C M   G PP++
Sbjct: 647 EMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNK 692



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 175/375 (46%), Gaps = 20/375 (5%)

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
            K+    K +  + +M  K   P+      +L  L +  M+ +A   ++++I    +  V
Sbjct: 216 TKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTV 275

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           + +N M+D   K G++    +++ ++  + I  S VT+N LI GF KNGK+ +ARR    
Sbjct: 276 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGD 335

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           ++  G   +  ++   +  YC++G       +  EM    I PT  TY + I  LC   +
Sbjct: 336 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 395

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           + +A +LL  M      PD ++YNT++  + K     +A  L + +   ++ P+  TYN 
Sbjct: 396 IDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 451

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           LIDGLC +G+L+ A  L   +    I    + YTT++K     G++  A   + +M+ KG
Sbjct: 452 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 511

Query: 584 F-------------EISIRDYTKSFFC---MMLSNGFPPDQEICEVMLIAFHQGGDLGSV 627
                         E+ + D  K+F     M+ ++   PD  I  V +    + G+L   
Sbjct: 512 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 571

Query: 628 FELAAVMIKSGLLPD 642
            E    + + GL+PD
Sbjct: 572 IEFQRKIFRVGLVPD 586



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 138/294 (46%), Gaps = 19/294 (6%)

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           + ++I K   PS+   N ++     +  +  A  + +T+  HG+ P+ +T+ T +++  +
Sbjct: 228 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 287

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G+++R+  +  EM+ + I  + VTY ++I G  K  K++EA +   DM   G      +
Sbjct: 288 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 347

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           +N +I  +CK      A+ + ++M    + PT++TYNI I  LC  G + +A  LL S+ 
Sbjct: 348 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 407

Query: 546 EHNISLTKVAYTTIIKAHCA---------------EGDVHKAMTFFCQMVEKGFEISIRD 590
             ++    V+Y T++  +                  GD+H ++  +  +++   E    +
Sbjct: 408 APDV----VSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 463

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
             +     M +    PD      ++  F + G+L    E+   M++ G+ PD +
Sbjct: 464 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 517


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 246/500 (49%), Gaps = 24/500 (4%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
           V +  G++ DAV  +A+++EL +  + +T N +L  L   R   ++  L++ +       
Sbjct: 131 VLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAP---- 186

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKG 119
           NV+T +IVID LC++  L +A         KE G  P VV+ N+++  Y K G  +  + 
Sbjct: 187 NVFTFNIVIDFLCKEGELAEARSLFSRM--KEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           L   M + G   D  +YN LI+  C  G ME A  +   M R GV  + +T+S     F 
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
               +  A K+  ++ ++G   +  TYT LI G C+ G +++ + L + M+ QG  LNV+
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            Y+VL+  +CK  ++ EA  +L  ME  G++ + + Y+ LI G        KA+ L +EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
            +K +  +   +GA++ GLC    + EA+     +  S    + ++Y  M+D   K G +
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            EA+ + +++++    P+             NG + +A +L + +   G+    V YT  
Sbjct: 485 PEAIAMLQKILDSGFQPN-------------NGCLNEAVQLFNEMVHKGMSLDKVVYTAL 531

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++ Y ++GN+    AL  +M    +      YT  I G C    + EA ++  +M   G+
Sbjct: 532 LDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGI 591

Query: 480 TPDQITYNTIIRSFCKCKDL 499
            PD+  YN +I    + ++L
Sbjct: 592 APDRAVYNCLITQIPEIREL 611



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 227/504 (45%), Gaps = 29/504 (5%)

Query: 47  MWDLYDDIKVSETPRNVYTNSIV---IDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNA 103
           + DL     ++  PR     S+V   +  L  +  L DA+  +         P+  + N 
Sbjct: 103 LVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNH 162

Query: 104 IMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHG 163
           I+ R  +     + + LF  +      P+ F++NI+I  LC  G + EA    + M   G
Sbjct: 163 ILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMG 218

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
             PD +T++ L  G+    ++    ++++++   G   D+VTY  LI  +C+ G +E   
Sbjct: 219 CLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAY 278

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
                M  +G   NV+ +S  + + CK G + EA+ L  +M   G+  +  TY+ LI G 
Sbjct: 279 GYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGT 338

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CK  ++  AI L +EM  + +  N   +  ++ GLC++  + EA      +  +    + 
Sbjct: 339 CKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANE 398

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           +LY  +I G+    N  +A+ L  ++  K +   I  + +LI G C   K+ +A+ LL  
Sbjct: 399 LLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTK 458

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQ----------------------EMET 441
           +   GLEP+ + YTT M+A  + G +   +A+LQ                      EM  
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVH 518

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           K +    V YT ++ G  KQ  L +A  L   M   G+  D   Y   I  FC    + +
Sbjct: 519 KGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPE 578

Query: 502 AFQLLNQMWLHNLEPTSATYNILI 525
           A ++ ++M  H + P  A YN LI
Sbjct: 579 AREVFSEMIGHGIAPDRAVYNCLI 602



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 211/454 (46%), Gaps = 28/454 (6%)

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           + +++++L  +   P++ T+ ++I   C+ G + E   L   M   G   +V+ ++ L+ 
Sbjct: 172 SGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLID 231

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
              K G +DE   L+ EM   G K D+VTY+ LI   CK  ++  A   +  M  + +  
Sbjct: 232 GYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMA 291

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           N       +   C++ ++ EA   F  + +     +   Y  +IDG  K G + +A+ L 
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
            +++ + +  ++VT+  L+ G CK  KVA+A  +L  ++  G+  + + YTT ++ +   
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN 411

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
            N ++ L LL EM+ K +      Y  +I+GLC   KL EA  LL  M   G+ P+ I Y
Sbjct: 412 KNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIY 471

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
            T++ +  K   + +A  +L ++     +P              NG L  A  L   +  
Sbjct: 472 TTMMDACFKSGKVPEAIAMLQKILDSGFQPN-------------NGCLNEAVQLFNEMVH 518

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------------- 592
             +SL KV YT ++  +  +G++H A     +M++ G ++ +  YT              
Sbjct: 519 KGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPE 578

Query: 593 -KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLG 625
            +  F  M+ +G  PD+ +   ++    +  +LG
Sbjct: 579 AREVFSEMIGHGIAPDRAVYNCLITQIPEIRELG 612



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 214/459 (46%), Gaps = 43/459 (9%)

Query: 225 LREVMLSQGFKLNVIAYSV--LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
           L    L+ G + + +A  V  LLS +   G +D+A+  +  +  + + P+  T + ++  
Sbjct: 107 LHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLR 166

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           L +        +L+ ++     +PN F    ++  LC++  + EAR  F  +    C+ D
Sbjct: 167 LARDRSGRLVRRLFEQL----PAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPD 222

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
           VV +N +IDGY K G + E  QL  ++        +VT+N+LI  FCK G++  A     
Sbjct: 223 VVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFA 282

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG----------------- 445
            +K  G+  + VT++TF++A+C+EG ++  + L  +M  + +                  
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342

Query: 446 -----------------PTHV-TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
                            P +V TYTV++ GLCK+ K+ EA  +L  M   GV  +++ Y 
Sbjct: 343 RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYT 402

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
           T+I      K+  KA  LL++M    LE   + Y  LI GLC    L  A  LL  + E 
Sbjct: 403 TLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDES 462

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS--IRDYTKSFFCMMLSNGFP 605
            +    + YTT++ A    G V +A+    ++++ GF+ +    +     F  M+  G  
Sbjct: 463 GLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMS 522

Query: 606 PDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
            D+ +   +L  + + G+L   F L A MI SGL  D F
Sbjct: 523 LDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLF 561



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 183/413 (44%), Gaps = 60/413 (14%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLL---YNLRHTDIMWDLYDDIKVSETPRNVY 64
           + G + +A  + ++MKE+     + T+NSL+         D +  L ++++ S    +V 
Sbjct: 200 KEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVV 259

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + +I+  C+  R++ A  +      +    +VV+ +  +  +CK G    A  LF  M
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
              G+  + F+Y  LI G C AG +++A+   ++M R GV  + +TY++L  G     ++
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
           + A  V++ +   G   + + YT LI G+    N E+ L L   M ++G +L++  Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV--------------- 289
           +  +C   ++DEA  LL +M+  GL+P+ + Y+ ++    K  KV               
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 290 -------HKAIQLYNEMCSKRISPNSFAHGAIL--------------------------- 315
                  ++A+QL+NEM  K +S +   + A+L                           
Sbjct: 500 QPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 559

Query: 316 --------LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
                    G C   M+ EAR  F  +I      D  +YN +I    ++  +G
Sbjct: 560 LFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQIPEIRELG 612



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 79/200 (39%), Gaps = 25/200 (12%)

Query: 15  AVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVID 71
           A+ ++++MK   L++ I  Y +L   L N+   D    L   +  S    N    + ++D
Sbjct: 417 ALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMD 476

Query: 72  GLCQQSRLQDAILFLQETAGKEFGPSVVSLN----------------------AIMSRYC 109
              +  ++ +AI  LQ+     F P+   LN                      A++  Y 
Sbjct: 477 ACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYL 536

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           K G    A  L   M+  GL  D F Y   I G C    M EA E  ++M  HG+ PD  
Sbjct: 537 KQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRA 596

Query: 170 TYSILAKGFHLLSQISGAWK 189
            Y+ L      + ++ G  K
Sbjct: 597 VYNCLITQIPEIRELGGGNK 616


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 262/533 (49%), Gaps = 14/533 (2%)

Query: 6   YSRTG-MVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
           Y R G  + DA  ++A +  L     + TYN+L+        + D    +       N Y
Sbjct: 146 YCRAGGRLADAERMLASLA-LSGSADVVTYNTLVAGYCREGRLNDARRLVADMPFAPNSY 204

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           TNS ++ GLC      DA   L E       P+ ++   I+   C+ G A+ A G+   M
Sbjct: 205 TNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQM 264

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            K         YN +I  L   G +EEAL   + M     +PD  +Y+ + KG     + 
Sbjct: 265 SKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRW 321

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +I  ++ K   PD VT+  +I   C  G V+  +++ E M   G K +   YS L
Sbjct: 322 EDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSAL 381

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           ++++ + G +D+AL LL     +  KP+ V Y  +++GLC+ D+     +L  EM   ++
Sbjct: 382 VNALSERGCVDDALELL---RTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQL 438

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
           + +    G I+  LC+K ++         +    C  D+++YN +I+G+ + G++ +A++
Sbjct: 439 NLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALE 498

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           L++ +  KR   ++VT+N ++ G C+  +  DA +L+  +      P+ VT++T ++  C
Sbjct: 499 LFKNMSCKR---NVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLC 555

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           ++G ++  + + ++M      P  + Y+ +I GL  Q  + +A++LL DM      PD I
Sbjct: 556 QKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDM---PCKPDTI 612

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
            Y+  ++  C+ +    A +L+ +M   N  P   T++ILI+ LC  G L++A
Sbjct: 613 CYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESA 665



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 140/583 (24%), Positives = 280/583 (48%), Gaps = 20/583 (3%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYN---SLLYNLRHTDIMWDLYDDIKVS 57
           M+     + G+   A+ V+ +M +      +  YN   S L  L   +    L+D +   
Sbjct: 243 MIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMPCK 302

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
               ++++ + V+ GLC+  R +DA   +     K+  P  V+ N ++S  C  G  + A
Sbjct: 303 P---DIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCA 359

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             +   M KYG  PD F+Y+ L++ L   G +++ALE    +     +P+ + Y  + KG
Sbjct: 360 MEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIP---WKPNTVCYRSVLKG 416

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                +     K++ +++    + D VT+ ++I   CQ G V+ G ++   M   G   +
Sbjct: 417 LCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPD 476

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +I Y+ L++   ++G +D+AL L   M     K ++VTY+ +++GLC+ ++   A +L  
Sbjct: 477 IIIYNSLINGFSENGSVDDALELFKNMSC---KRNVVTYNYMLKGLCRAEQWEDAGKLVA 533

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM      PN      ++  LC+K  +  A   F+ +   NC+ +V++Y+ +I+G     
Sbjct: 534 EMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQE 593

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL-LDTIKLHGLEPSAVTY 416
            + +A++L   +  K   P  + +++ + G C+  +  DA  L L+ I+ + L P  VT+
Sbjct: 594 CVDDALKLLNDMPCK---PDTICYSAALKGLCRAERWEDAGELILEMIRKNCL-PDEVTF 649

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           +  +N  C +G ++    + + M      P    Y+ +I G  +Q++ ++A+QLL +M  
Sbjct: 650 SILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNM-- 707

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
               PD I Y+  ++  C+ K    A +L+ +M+        AT+++LI  LC NG +  
Sbjct: 708 -PCEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDM 766

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQM 579
           A  +   +  +  S  +  +++++  +  +  V + +     M
Sbjct: 767 ATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 149/582 (25%), Positives = 268/582 (46%), Gaps = 25/582 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTY-NSLLYNLRHTDIMWD----LYDDIKVSETP 60
           Y R G ++DA  ++A     D+  +  +Y NS L     ++  WD    L  ++  S  P
Sbjct: 181 YCREGRLNDARRLVA-----DMPFAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCP 235

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            N  T  ++I  LCQ      A+  L + +       V+  N I+S   +LG  E A  L
Sbjct: 236 PNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHL 295

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F  M      PD FSYN ++ GLC  G  E+A      M R    PD +T++ +      
Sbjct: 296 FDQM---PCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCH 352

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +  A +V++++   G  PD  TY+ L+    + G V++ L   E++ +  +K N + 
Sbjct: 353 RGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDAL---ELLRTIPWKPNTVC 409

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y  +L  +C++ R D+   L+ EM    L  D VT+ ++I  LC++  V    ++  EM 
Sbjct: 410 YRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMT 469

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
               SP+   + +++ G  E   + +A   F ++   +C ++VV YN M+ G  +     
Sbjct: 470 KFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVVTYNYMLKGLCRAEQWE 526

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
           +A +L  ++++    P+ VTF++LI   C+ G V  A  + + +  +   P+ + Y+T +
Sbjct: 527 DAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLI 586

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           N   ++  +   L LL +M  K   P  + Y+  +KGLC+  + ++A +L+ +M      
Sbjct: 587 NGLSDQECVDDALKLLNDMPCK---PDTICYSAALKGLCRAERWEDAGELILEMIRKNCL 643

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           PD++T++ +I + C    L  A ++   M  +   P    Y+ LI+G     +   A+  
Sbjct: 644 PDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGF---AEQYRAEDA 700

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           L  L+        + Y+  +K  C       A     +M  K
Sbjct: 701 LQLLRNMPCEPDTICYSAALKGLCRAKRWEDARELIAEMFRK 742



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 146/633 (23%), Positives = 273/633 (43%), Gaps = 80/633 (12%)

Query: 52  DDIKVSETPRNVYTNSIVIDGLCQQSRLQDA--ILFLQETAGKEFGPSVVSLNAIMSRYC 109
           + ++  E P  V   +++I  LC   RL DA  +L   E AG       V+ N +++ YC
Sbjct: 92  ESMRDPERPAAVPC-TLLIKKLCAAGRLDDAERVLGASERAGTA---DAVTRNTLVAGYC 147

Query: 110 KLG--FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           + G   A+  + L  L L      D  +YN L+ G C  G + +A     DM      P+
Sbjct: 148 RAGGRLADAERMLASLALSGSA--DVVTYNTLVAGYCREGRLNDARRLVADMP---FAPN 202

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
           + T S L KG     +   A +++ +++  G  P+ +T+ ++I   CQ G  +  + + +
Sbjct: 203 SYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLD 262

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M        VI Y+ ++S + + GR++EAL L  +M     KPD+ +Y+ +++GLC+  
Sbjct: 263 QMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMPC---KPDIFSYNTVMKGLCRDG 319

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           +   A  L   M  K   P+      ++  LC + ++  A    + +    C  D   Y+
Sbjct: 320 RWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYS 379

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRL------- 400
            +++   + G + +A++L R +  K   P+ V + S++ G C+  +  D  +L       
Sbjct: 380 ALVNALSERGCVDDALELLRTIPWK---PNTVCYRSVLKGLCRADRWDDVGKLVAEMIRN 436

Query: 401 ---LDTIKL-------------------------HGLEPSAVTYTTFMNAYCEEGNIQRL 432
              LD +                            G  P  + Y + +N + E G++   
Sbjct: 437 QLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDA 496

Query: 433 LALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS 492
           L L + M  K      VTY  ++KGLC+  + ++A +L+ +M      P+++T++T+I  
Sbjct: 497 LELFKNMSCKR---NVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISY 553

Query: 493 FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLT 552
            C+   +  A ++  +M  +N  P    Y+ LI+GL    D +  D  L  L +      
Sbjct: 554 LCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGL---SDQECVDDALKLLNDMPCKPD 610

Query: 553 KVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICE 612
            + Y+  +K  C       A     +M+ K              C+       PD+    
Sbjct: 611 TICYSAALKGLCRAERWEDAGELILEMIRKN-------------CL-------PDEVTFS 650

Query: 613 VMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           +++      G L S  E++ +M+K   +P+ F+
Sbjct: 651 ILINNLCHKGFLESATEVSELMLKYECMPNVFI 683


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 174/751 (23%), Positives = 317/751 (42%), Gaps = 115/751 (15%)

Query: 6   YSRTGMVHDAV-FVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
           ++  G+VHD V  V +KM    +   +   N L+++L     +      ++      +  
Sbjct: 103 FNVNGLVHDQVSLVYSKMIACGVSPDVFALNVLIHSLCKVGQLSFAISLLRNRVISVDTV 162

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL---- 120
           T + VI GLC+     +A  FL E       P  VS N ++  +CK+G    AK L    
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEI 222

Query: 121 ------------------------FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
                                   +  M+  G  PD  +++ +I+ LC  G + E     
Sbjct: 223 SELNLITHTILISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLL 282

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
            +M   GV P+ +TY+ L            A  +  +++++G   D+V YTVL+ G  + 
Sbjct: 283 REMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKA 342

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G++ E  K  +++L      NV+ Y+ L+  +CK+G +  A  ++ +M    + P++VTY
Sbjct: 343 GDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTY 402

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE-----------KEM-- 323
           S +I G  K+  + +A+ L  +M  + + PN F +G ++ GL +           KEM  
Sbjct: 403 SSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRL 462

Query: 324 --ITEARMYFDSLI-----------MSNCIQDVVL---------YNIMIDGYVKLGNIGE 361
             + E     D+L+           +   ++D+V          Y  +ID + K G+   
Sbjct: 463 IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEA 522

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A+    ++ EK +   +V++N LI G  K GKV  A      ++  G+EP   T+   MN
Sbjct: 523 ALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMN 581

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           +  ++G+ + +L L  +M++  I P+ +   +V+  LC++ K++EA+ +L+ M  + + P
Sbjct: 582 SQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHP 641

Query: 482 DQIT-----------------------------------YNTIIRSFCKCKDLRKAFQLL 506
           +  T                                   YNT+I + CK    RKA  ++
Sbjct: 642 NLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVM 701

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
             M      P + T+N L+ G  V   +  A      + E  IS     Y TII+     
Sbjct: 702 EDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDA 761

Query: 567 GDVHKAMTFFCQMVEKGF---------------EISIRDYTKSFFCMMLSNGFPPDQEIC 611
           G + +   +  +M  +G                +I  +  + + +C M+++G  P     
Sbjct: 762 GLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTY 821

Query: 612 EVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            V++  F + G +    EL   M K  + P+
Sbjct: 822 NVLISEFAKVGKMLQATELMKEMGKRRVSPN 852



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 236/508 (46%), Gaps = 2/508 (0%)

Query: 57  SETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           +E P NV T + ++DGLC+   L  A   + +   K   P+VV+ +++++ Y K G  E 
Sbjct: 359 NEVP-NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEE 417

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  L   M    + P+ F+Y  +I GL  AG  E A E + +M   GVE +      L  
Sbjct: 418 AVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVN 477

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
               + +I     +++ ++ KG   D + YT LI  + + G+ E  L   E M  +    
Sbjct: 478 HLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPW 537

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           +V++Y+VL+S + K G++  A      M   G++PD+ T++I++    KQ      ++L+
Sbjct: 538 DVVSYNVLISGLLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLW 596

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           ++M S  I P+      ++  LCEK  + EA    D ++      ++  Y I +D   K 
Sbjct: 597 DKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKH 656

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
                  + +  L+   I  S   +N+LI   CK G    A  +++ ++  G  P  VT+
Sbjct: 657 KRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTF 716

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              M+ Y    ++ + L+    M    I P   TY  +I+GL     ++E  + L +M  
Sbjct: 717 NALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKS 776

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
            G+ PD  TYN +I    K  + +++  +  +M    L P ++TYN+LI      G +  
Sbjct: 777 RGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQ 836

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHC 564
           A  L+  + +  +S     Y T+I   C
Sbjct: 837 ATELMKEMGKRRVSPNTSTYCTMISGLC 864



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 237/491 (48%), Gaps = 4/491 (0%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPR---NVY 64
           + G +  A F+I +M E  +  ++ TY+S++       ++ +    ++  E      N +
Sbjct: 376 KAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGF 435

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T   VIDGL +  + + A    +E        +   L+A+++   ++G  +  KGL   M
Sbjct: 436 TYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDM 495

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +  G+  D  +Y  LI      G  E AL +  +M    +  D ++Y++L  G     ++
Sbjct: 496 VSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKV 555

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
              W   + +  KG +PDI T+ +++    + G+ E  LKL + M S G K +++  +++
Sbjct: 556 GADW-AYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIV 614

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +  +C+ G++ EA+ +L +M  + + P+L TY I +    K  +     + +  + S  I
Sbjct: 615 VGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGI 674

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
             +   +  ++  LC+  M  +A M  + +     + D V +N ++ GY    ++G+A+ 
Sbjct: 675 KLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALS 734

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
            Y  ++E  ISP++ T+N++I G    G + +  + L  +K  G+ P   TY   ++   
Sbjct: 735 TYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQA 794

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           + GN +  + +  EM    + P   TY V+I    K  K+ +A +L+++M    V+P+  
Sbjct: 795 KIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPNTS 854

Query: 485 TYNTIIRSFCK 495
           TY T+I   CK
Sbjct: 855 TYCTMISGLCK 865



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/542 (24%), Positives = 234/542 (43%), Gaps = 59/542 (10%)

Query: 120 LFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFH 179
           ++  M+  G+ PD F+ N+LIH LC  G +  A+    +     +  D +TY+ +  G  
Sbjct: 116 VYSKMIACGVSPDVFALNVLIHSLCKVGQLSFAISLLRN---RVISVDTVTYNTVISGLC 172

Query: 180 LLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
                  A++ + +++  G  PD V++  LI G+C++GN        + ++ +  +LN+I
Sbjct: 173 EHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARA----KALVDEISELNLI 228

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            +++L+SS      I+EA     +M   G  PD+VT+S +I  LCK  KV +   L  EM
Sbjct: 229 THTILISSYYNLHAIEEAY---RDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREM 285

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
               + PN                                    V Y  ++D   K  + 
Sbjct: 286 EEMGVYPNH-----------------------------------VTYTTLVDSLFKAKDY 310

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A+ LY Q++ + I   +V +  L+ G  K G + +A +    +      P+ VTYT  
Sbjct: 311 RHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTAL 370

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           ++  C+ G++     ++ +M  K++ P  VTY+ +I G  K+  L+EAV L+  M    V
Sbjct: 371 VDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNV 430

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
            P+  TY T+I    K      A ++  +M L  +E  +   + L++ L   G +K    
Sbjct: 431 VPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG 490

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT------- 592
           L+  +    ++L  + YT++I      GD   A+++  +M EK     +  Y        
Sbjct: 491 LVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLL 550

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                     +  M   G  PD     +M+ +  + GD   + +L   M   G+ P   +
Sbjct: 551 KFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMI 610

Query: 646 IN 647
            N
Sbjct: 611 CN 612



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 166/722 (22%), Positives = 283/722 (39%), Gaps = 144/722 (19%)

Query: 17  FVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLY----DDIKVSETPRNVYTNSIVIDG 72
           F I+ ++   + V   TYN+++  L    +  + Y    + +K+   P  V  N++ IDG
Sbjct: 147 FAISLLRNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTL-IDG 205

Query: 73  LCQQSRLQDAILFLQETAG----------------------------KEFGPSVVSLNAI 104
            C+      A   + E +                               F P VV+ ++I
Sbjct: 206 FCKVGNFARAKALVDEISELNLITHTILISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSI 265

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           ++R CK G       L   M + G++P+  +Y  L+  L  A     AL   + M   G+
Sbjct: 266 INRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGI 325

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
             D + Y++L  G      +  A K  + LL     P++VTYT L+ G C+ G++     
Sbjct: 326 PVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEF 385

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           +   ML +    NV+ YS +++   K G ++EA+ L+ +ME   + P+  TY  +I GL 
Sbjct: 386 IITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLF 445

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCE-----------KEMITEA----RM 329
           K  K   A ++  EM    +  N++   A++  L             K+M+++      +
Sbjct: 446 KAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHI 505

Query: 330 YFDSLI--------------MSNCIQ------DVVLYNIMIDGYVKLGNIGEAVQLYRQL 369
            + SLI               +  +Q      DVV YN++I G +K G +G A   Y+ +
Sbjct: 506 NYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVG-ADWAYKGM 564

Query: 370 IEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNI 429
            EK I P I TFN ++    K G      +L D +K  G++PS +     +   CE+G +
Sbjct: 565 REKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKM 624

Query: 430 QRLLALLQEM-----------------------ETKAIGPTHVT------------YTVV 454
           +  + +L +M                          AI  TH T            Y  +
Sbjct: 625 KEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTL 684

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT----------------------------- 485
           I  LCK    ++A  ++EDM   G  PD +T                             
Sbjct: 685 IATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGI 744

Query: 486 ------YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADC 539
                 YNTIIR       +++  + L++M    + P   TYN LI G    G+ K +  
Sbjct: 745 SPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMT 804

Query: 540 LLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMM 599
           +   +    +      Y  +I      G + +A     +M ++    +      S +C M
Sbjct: 805 IYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPNT-----STYCTM 859

Query: 600 LS 601
           +S
Sbjct: 860 IS 861



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 174/360 (48%), Gaps = 32/360 (8%)

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL-YNEMCSKRISPNSFA 310
           GR+  A   L  M   G+ PDL  ++ LI        VH  + L Y++M +  +SP+ FA
Sbjct: 72  GRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKMIACGVSPDVFA 131

Query: 311 HGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
              ++  LC+   ++ A     + ++S    D V YN +I G  + G   EA Q   +++
Sbjct: 132 LNVLIHSLCKVGQLSFAISLLRNRVIS---VDTVTYNTVISGLCEHGLADEAYQFLSEMV 188

Query: 371 EKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI----------------KLH------- 407
           +  I P  V+FN+LI GFCK G  A A+ L+D I                 LH       
Sbjct: 189 KIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTILISSYYNLHAIEEAYR 248

Query: 408 -----GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
                G +P  VT+++ +N  C++G +     LL+EME   + P HVTYT ++  L K  
Sbjct: 249 DMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAK 308

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
             + A+ L   M V G+  D + Y  ++    K  DLR+A +    +   N  P   TY 
Sbjct: 309 DYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYT 368

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            L+DGLC  GDL +A+ ++  + E ++    V Y+++I  +  +G + +A++   +M ++
Sbjct: 369 ALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQ 428



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 3/193 (1%)

Query: 27  LKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAI 83
           +K+S Q YN+L   L  L  T     + +D++      +  T + ++ G    S +  A+
Sbjct: 674 IKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKAL 733

Query: 84  LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGL 143
                       P+V + N I+      G  +  +     M   G+ PD F+YN LI G 
Sbjct: 734 STYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQ 793

Query: 144 CIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDI 203
              G+ +E++    +M   G+ P   TY++L   F  + ++  A ++++++  +   P+ 
Sbjct: 794 AKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPNT 853

Query: 204 VTYTVLICGYCQI 216
            TY  +I G C++
Sbjct: 854 STYCTMISGLCKL 866


>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
 gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 235/485 (48%), Gaps = 1/485 (0%)

Query: 45  DIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           D    ++D++ +SE        +  I  L + SR   A  +  + A   F  S  + +  
Sbjct: 26  DYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSRF 85

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +S  C+         L   M K    PD +++NI ++ L      E ALE    M   G 
Sbjct: 86  ISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGR 145

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
           EPD +T++I+  G   + +   A +    +L KG  PD      L  G C  G V+   +
Sbjct: 146 EPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYE 205

Query: 225 LREVMLSQGF-KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           L   ++S G  +++ + Y+ L+S  C++GRID+AL ++  M   G KPDLVTY++L+   
Sbjct: 206 LIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYC 265

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           C +    +A++L  +M    I P+ +++  +L   C+     +A ++  + ++     DV
Sbjct: 266 CNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCDV 325

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V YN +I  +  + N   A +L+ ++  K I+P +VTF  LI  F + G    A++LLD 
Sbjct: 326 VSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDL 385

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +   GL P  + YTT ++ +C+ G ++   ++  +M  K I P  V+Y  +I G CK  +
Sbjct: 386 MAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLR 445

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           + E + L E M   G  PD++TY  II +  +   L  A ++ +QM    L        +
Sbjct: 446 VGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEM 505

Query: 524 LIDGL 528
           LI+ +
Sbjct: 506 LINAI 510



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 190/416 (45%), Gaps = 21/416 (5%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M   GF L+   YS  +S +C++        LL +ME +   PD+  ++I +  L ++++
Sbjct: 70  MAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENR 129

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNI 348
              A++++  M  +   P+      I+ GLC+ +    A  ++ +++      D      
Sbjct: 130 EESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVA 189

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISP-SIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
           +  G    G +  A +L   +I   +S  S + +N+LI GFC+ G++  A  ++  +   
Sbjct: 190 LAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRT 249

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G +P  VTY   +N  C E   +  + LL++ME  AI P   +Y  ++K  CK     +A
Sbjct: 250 GCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKA 309

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
              +    V     D ++YNTII++FC   + R+A++L  +M    + P   T+ ILI  
Sbjct: 310 YLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKA 369

Query: 528 LCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
               G+   A  LL  +    +   ++ YTTII  HC  G V  A + FC MVEKG    
Sbjct: 370 FLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPD 429

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
           +  Y        L NGF      C+ + +        G V  L   M++ G  PD+
Sbjct: 430 VVSYNA------LINGF------CKSLRV--------GEVMHLYEQMLQRGSFPDE 465



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 184/418 (44%), Gaps = 36/418 (8%)

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TY+  I G CQ         L + M       ++ A+++ L+ + +  R + AL +   M
Sbjct: 81  TYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRM 140

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
              G +PD+VT++I+I GLCK  K   A+Q +  M  K I P++ A  A+ +GLC+   +
Sbjct: 141 VERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQV 200

Query: 325 TEARMYFDSLIMSNCIQ-DVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
             A      +I     +   ++YN +I G+ + G I +A+ +   +      P +VT+N 
Sbjct: 201 DLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNV 260

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSA------------------------------ 413
           L+   C      +A +LL  ++   +EP                                
Sbjct: 261 LLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPK 320

Query: 414 -----VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
                V+Y T + A+C   N +R   L +EM  K I P  VT+T++IK   ++     A 
Sbjct: 321 GFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAK 380

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +LL+ M  +G+ PD+I Y TII   CK   +  A  +   M    + P   +YN LI+G 
Sbjct: 381 KLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGF 440

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
           C +  +     L   + +      +V Y  II A   E  +  A   + QM+E+G  +
Sbjct: 441 CKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTL 498



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 205/444 (46%), Gaps = 9/444 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTD---IMWDLYDDIKVSETPRN 62
           +SR  + H      +KM  L   +S  TY+  +  L  T     + +L  D++      +
Sbjct: 57  HSRFDLAHH---YYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPD 113

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           ++  +I ++ L +++R + A+        +   P VV+   I+   CK+   + A   + 
Sbjct: 114 IWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWL 173

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV-EPDAITYSILAKGFHLL 181
            ML  G+ PD  +   L  GLC  G ++ A E    +   G+ E   + Y+ L  GF   
Sbjct: 174 NMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRA 233

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +I  A  ++  +   G  PD+VTY VL+   C     EE +KL + M     + +V +Y
Sbjct: 234 GRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSY 293

Query: 242 SVLLSSMCKSGRIDEA-LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           + LL + CK+   D+A L ++ +M   G   D+V+Y+ +I+  C      +A +L+ EM 
Sbjct: 294 NQLLKAHCKANHPDKAYLFMVTKMVPKGF-CDVVSYNTIIKAFCSISNNRRAYKLFEEMG 352

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
            K I+P+      ++     +     A+   D +     + D + Y  +ID + K G + 
Sbjct: 353 RKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVE 412

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A  ++  ++EK I+P +V++N+LI GFCK+ +V +   L + +   G  P  VTY   +
Sbjct: 413 MAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLII 472

Query: 421 NAYCEEGNIQRLLALLQEMETKAI 444
            A   E  +     +  +M  + +
Sbjct: 473 GALVRENKLSDACRVWDQMMERGL 496



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/386 (22%), Positives = 143/386 (37%), Gaps = 86/386 (22%)

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           ++Y   I  YVK G I  AV+++ ++         + +N  I    ++ +   A      
Sbjct: 10  LIYRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSK 69

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET---------------------- 441
           +   G   S+ TY+ F++  C+      +  LL++ME                       
Sbjct: 70  MAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENR 129

Query: 442 -------------KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ----- 483
                        +   P  VT+T++I GLCK  K   AVQ   +M   G+ PD      
Sbjct: 130 EESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVA 189

Query: 484 -------------------------------ITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
                                          + YN +I  FC+   + KA  +++ M   
Sbjct: 190 LAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRT 249

Query: 513 NLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKA 572
             +P   TYN+L++  C     + A  LL  ++   I     +Y  ++KAHC      KA
Sbjct: 250 GCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKA 309

Query: 573 MTFF-CQMVEKGF--EISIRDYTKSF------------FCMMLSNGFPPDQEICEVMLIA 617
             F   +MV KGF   +S     K+F            F  M   G  PD     +++ A
Sbjct: 310 YLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKA 369

Query: 618 FHQGGDLGSVFELAAVMIKSGLLPDK 643
           F + G+     +L  +M   GLLPD+
Sbjct: 370 FLREGNSDMAKKLLDLMAGMGLLPDR 395


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 213/421 (50%), Gaps = 3/421 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS+V  + ++S   K    ++   LF  M   G+  D ++YNI+I+ LC       AL  
Sbjct: 67  PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSV 126

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M + G EPD +T S L  GF   +++ GA  ++ K+       D+V Y  +I G+C+
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCK 186

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G V   L L   M   G + + + Y+ L++ +C SGR  +A  L+ +M    + P+++T
Sbjct: 187 TGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVIT 246

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           ++ LI    ++ K  +A + Y EM  + I P+ F + +++ GLC    + EA+   D ++
Sbjct: 247 FTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMV 306

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              C  DVV YN +I+G+ K   + E  +L R++ ++ +    VTFN++I G+ + G+  
Sbjct: 307 TKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPD 366

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A+ +   +   G  P+  TY+  +   C    +++ L L + M+   +     TY +VI
Sbjct: 367 AAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVI 423

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G+C    +++A  L   +   G+ PD +TY T+I  FC+ +   KA  L  +M    L 
Sbjct: 424 HGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLL 483

Query: 516 P 516
           P
Sbjct: 484 P 484



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 219/465 (47%), Gaps = 14/465 (3%)

Query: 85  FLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
           F+    G+ F    +S+N            + A  LFC M++    P    ++ L+  + 
Sbjct: 32  FISRFWGRAFTTKRLSMNL-----------DEAIDLFCNMIQSRPLPSIVEFSKLLSNIA 80

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
            + + +  +   ++M   G+  D  TY+I+       S+   A  V+ K++  G +PD+V
Sbjct: 81  KSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV 140

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           T + LI G+CQ   V   + L   M     KL+V+ Y+ ++   CK+G ++ AL L   M
Sbjct: 141 TVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRM 200

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
           E  G++ D VTY+ L+ GLC   +   A +L  +M  + I PN     A++     +   
Sbjct: 201 ERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKF 260

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
            EA+ +++ +I      DV  YN MI G    G + EA Q+   ++ K   P +VT+N+L
Sbjct: 261 LEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTL 320

Query: 385 IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
           I GFCK  +V +  +L+  +   GL    VT+ T +  Y + G       +   M ++  
Sbjct: 321 INGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR-- 378

Query: 445 GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
            P   TY++++ GLC  W++++A+ L E M    +  D  TYN +I   C   ++  A+ 
Sbjct: 379 -PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWD 437

Query: 505 LLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNI 549
           L   +    LEP   TY  +I G C       AD L   +QE  +
Sbjct: 438 LFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGL 482



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 196/414 (47%), Gaps = 34/414 (8%)

Query: 218 NVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYS 277
           N++E + L   M+      +++ +S LLS++ KS   D  + L + ME  G+  DL TY+
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
           I+I  LC+  +   A+ +  +M      P+     +++ G C+   +  A      +   
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
            C  DVV+YN +IDG+ K G +  A+ L+ ++    +    VT+NSL+ G C +G+ +DA
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDA 228

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
            RL+  + +  + P+ +T+T  +NA+  EG         +EM  + I P   TY  +I G
Sbjct: 229 ARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHG 288

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL--- 514
           LC   ++ EA Q+L+ M   G  PD +TYNT+I  FCK K + +  +L+ +M    L   
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVD 348

Query: 515 -----------------------------EPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
                                         P   TY+IL+ GLC N  ++ A  L  S+Q
Sbjct: 349 TVTFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQ 408

Query: 546 EHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK--SFFC 597
           +  + L    Y  +I   C  G+V  A   FC +  KG E  +  YT   S FC
Sbjct: 409 KSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFC 462



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 183/350 (52%), Gaps = 3/350 (0%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T S +I+G CQ +R+  A+  + +         VV  N I+  +CK G    A  LF
Sbjct: 138 DVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLF 197

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + G+  D  +YN L+ GLC +G   +A     DM    + P+ IT++ L   F   
Sbjct: 198 GRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVRE 257

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A K  ++++ +  DPD+ TY  +I G C  G V+E  ++ ++M+++G   +V+ Y
Sbjct: 258 GKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTY 317

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L++  CK+ R+DE   L+ EM   GL  D VT++ +I+G  +  +   A ++++ M S
Sbjct: 318 NTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGS 377

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           +   PN   +  +L GLC    + +A + F+S+  S    D+  YNI+I G   +GN+ +
Sbjct: 378 R---PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVED 434

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEP 411
           A  L+  L  K + P +VT+ ++I GFC+      A  L   ++  GL P
Sbjct: 435 AWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 221/483 (45%), Gaps = 42/483 (8%)

Query: 3   AFVYSRTGM-VHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSE 58
           AF   R  M + +A+ +   M +     SI  ++ LL N+   ++ D++  L+ ++++  
Sbjct: 40  AFTTKRLSMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICG 99

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
              ++YT +IVI+ LC+ SR                   V++L+ +              
Sbjct: 100 IGHDLYTYNIVINCLCRCSRF------------------VIALSVVGK------------ 129

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
                M+K+G  PD  + + LI+G C    +  A++  + M     + D + Y+ +  GF
Sbjct: 130 -----MMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGF 184

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
                ++ A  +  ++   G   D VTY  L+ G C  G   +  +L   M+ +    NV
Sbjct: 185 CKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNV 244

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
           I ++ L+++  + G+  EA     EM    + PD+ TY+ +I GLC   +V +A Q+ + 
Sbjct: 245 ITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDL 304

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M +K   P+   +  ++ G C+ + + E       +     + D V +N +I GY + G 
Sbjct: 305 MVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGR 364

Query: 359 IGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTT 418
              A +++ ++  +   P+I T++ L+YG C N +V  A  L ++++   +E    TY  
Sbjct: 365 PDAAQEIFSRMGSR---PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNI 421

Query: 419 FMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG 478
            ++  C  GN++    L   +  K + P  VTYT +I G C++    +A  L   M   G
Sbjct: 422 VIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDG 481

Query: 479 VTP 481
           + P
Sbjct: 482 LLP 484



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 20/285 (7%)

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           N+ EA+ L+  +I+ R  PSIV F+ L+    K+        L   +++ G+     TY 
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             +N  C        L+++ +M      P  VT + +I G C+  ++  AV L+  M  +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
               D + YNTII  FCK   +  A  L  +M    +   + TYN L+ GLC +G   +A
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDA 228

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFC 597
             L+  +   +I    + +T +I A   EG   +A  F+ +M+ +  +            
Sbjct: 229 ARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCID------------ 276

Query: 598 MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                   PD      M+      G +    ++  +M+  G  PD
Sbjct: 277 --------PDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPD 313


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 239/492 (48%), Gaps = 14/492 (2%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG--LHPDAFSYNILIHGLCIAGSMEEAL 153
           P++V+ N ++  + K G  + A  L   M   G     +  ++N++I  L   G +E A+
Sbjct: 235 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAV 294

Query: 154 EFTNDMGRHGVEPDAITY-----SILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTV 208
           +  + M R   +  + TY     ++L +GF     +  A  +  ++  +G  P +VTY  
Sbjct: 295 KLVDSM-RLSKKASSFTYNPLITALLERGF-----VRKAEALQMEMENEGIMPTVVTYNA 348

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           +I G  +    E        M + G   +VI Y+ LL+  CK+G + EAL LL ++   G
Sbjct: 349 IIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAG 408

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           L P ++TY+ LI G C+   + +A +L  EM  +   P+   +  ++ G  +   +  AR
Sbjct: 409 LAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAR 468

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
            +FD ++      D   YN  I   + L +   A QL   ++ K I P  VT+N +I G 
Sbjct: 469 EFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGL 528

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           CK G + DA+RL   +   GL+P  +TYT  ++A+CE G ++    LL  M +  + P+ 
Sbjct: 529 CKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSV 588

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VTYT+++   C++  L  A      M  +G+ P++ITYN +I + C       AF+  ++
Sbjct: 589 VTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHE 648

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M    L P   TY +LIDG C  G+  +A  L   + ++ I      +  + K    EG 
Sbjct: 649 MLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF-DEGH 707

Query: 569 VHKAMTFFCQMV 580
           ++ A+ +   +V
Sbjct: 708 MYHAIEYMENIV 719



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 246/519 (47%), Gaps = 20/519 (3%)

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
           F L+  +G+ PD    N ++  L  A   ++      +M +  VEP  +TY+ L   F  
Sbjct: 190 FRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLK 249

Query: 181 LSQISGAWKVIQKLLIKGSDPDI--VTYTVLICGYCQIGNVEEGLKLREVM-LSQGFKLN 237
             +   A  +++++  +G    +  VT+ V+I    + G++E  +KL + M LS+  K +
Sbjct: 250 EGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK--KAS 307

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
              Y+ L++++ + G + +A  L  EME  G+ P +VTY+ +I GL K ++   A   + 
Sbjct: 308 SFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFA 367

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
           EM +  + P+   + ++L   C+   + EA      L  +     V+ YN +IDGY +LG
Sbjct: 368 EMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 427

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
           ++ EA +L  +++E+   P + T+  L+ G  K   +A AR   D +   GL+P    Y 
Sbjct: 428 DLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYN 487

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
           T + A     +      L + M  K I P  VTY V+I GLCK   L++A +L   M   
Sbjct: 488 TRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSD 547

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
           G+ PD ITY  +I + C+   LR+A +LLN M    L+P+  TY IL+   C  G+L +A
Sbjct: 548 GLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSA 607

Query: 538 DCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK---- 593
                 + +  I   ++ Y  +I A C  G    A   F +M+E+G   +   YT     
Sbjct: 608 YGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDG 667

Query: 594 -----------SFFCMMLSNGFPPDQEICEVMLIAFHQG 621
                        +  M  NG PPD      +   F +G
Sbjct: 668 NCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDEG 706



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 225/445 (50%), Gaps = 5/445 (1%)

Query: 33  TYN---SLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           T+N   S L    H +    L D +++S+   + +T + +I  L ++  ++ A     E 
Sbjct: 276 TFNVVISFLAREGHLENAVKLVDSMRLSKKASS-FTYNPLITALLERGFVRKAEALQMEM 334

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             +   P+VV+ NAI+    K   AE A+  F  M   GL PD  +YN L++  C AG++
Sbjct: 335 ENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNL 394

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +EAL    D+ R G+ P  +TY+ L  G+  L  ++ A ++ ++++ +G  PD+ TYT+L
Sbjct: 395 KEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTIL 454

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           + G  ++ N+    +  + MLS+G + +  AY+  + +         A  L   M   G+
Sbjct: 455 MNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGI 514

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
            PD VTY+++I GLCK   +  A +L  +M S  + P+   +  ++   CE+ ++ EAR 
Sbjct: 515 YPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARK 574

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             + ++       VV Y I++    + GN+  A   +R++++  I P+ +T+N LI+  C
Sbjct: 575 LLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALC 634

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
             G+   A R    +   GL P+  TYT  ++  C EGN    + L  EM    I P + 
Sbjct: 635 MTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYC 694

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDM 474
           T+  + KG   +  +  A++ +E++
Sbjct: 695 THNALFKGF-DEGHMYHAIEYMENI 718



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 198/422 (46%), Gaps = 25/422 (5%)

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG--LKPDLVTYSILIRGLCKQ 286
           ML    +  ++ Y+ LL S  K GR DEA  LL EME  G     + VT++++I  L ++
Sbjct: 228 MLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLARE 287

Query: 287 DKVHKAIQLYNEM-CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
             +  A++L + M  SK+ S  SF +  ++  L E+  + +A      +     +  VV 
Sbjct: 288 GHLENAVKLVDSMRLSKKAS--SFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVT 345

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           YN +I G +K      A   + ++    + P ++T+NSL+  +CK G + +A  LL  ++
Sbjct: 346 YNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLR 405

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
             GL P+ +TY T ++ YC  G++     L +EM  +   P   TYT+++ G  K   L 
Sbjct: 406 RAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLA 465

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
            A +  ++M   G+ PD   YNT I +         AFQL   M L  + P + TYN++I
Sbjct: 466 MAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVII 525

Query: 526 DGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFE 585
           DGLC  G+LK+A  L   +    +    + YT +I AHC  G + +A      MV     
Sbjct: 526 DGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMV----- 580

Query: 586 ISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
                          S+G  P      +++    + G+L S +     M+  G+ P++  
Sbjct: 581 ---------------SDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEIT 625

Query: 646 IN 647
            N
Sbjct: 626 YN 627



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 182/370 (49%), Gaps = 32/370 (8%)

Query: 19  IAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSR 78
            A+M+ + L   + TYNSLL                       N Y         C+   
Sbjct: 366 FAEMRAMGLLPDVITYNSLL-----------------------NRY---------CKAGN 393

Query: 79  LQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNI 138
           L++A+  L +       P+V++ N ++  YC+LG    A+ L   M++ G  PD  +Y I
Sbjct: 394 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTI 453

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           L++G     ++  A EF ++M   G++PD   Y+        LS    A+++ + +++KG
Sbjct: 454 LMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKG 513

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             PD VTY V+I G C+ GN+++  +L+  M+S G + + I Y+ L+ + C+ G + EA 
Sbjct: 514 IYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREAR 573

Query: 259 GLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGL 318
            LL  M + GL+P +VTY+IL+   C++  ++ A   + +M    I PN   +  ++  L
Sbjct: 574 KLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHAL 633

Query: 319 CEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
           C       A  +F  ++      +   Y ++IDG  + GN  +A++LY ++ +  I P  
Sbjct: 634 CMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDY 693

Query: 379 VTFNSLIYGF 388
            T N+L  GF
Sbjct: 694 CTHNALFKGF 703



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 167/356 (46%), Gaps = 18/356 (5%)

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           ++P+      +L  L +     + R  +  ++       +V YN ++D ++K G   EA 
Sbjct: 198 VAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEAS 257

Query: 364 QLYRQLIEKR--ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
            L +++  +    S + VTFN +I    + G + +A +L+D+++L   + S+ TY   + 
Sbjct: 258 MLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-KASSFTYNPLIT 316

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
           A  E G +++  AL  EME + I PT VTY  +I GL K  + + A     +M  +G+ P
Sbjct: 317 ALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLP 376

Query: 482 DQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
           D ITYN+++  +CK  +L++A  LL  +    L PT  TYN LIDG C  GDL  A  L 
Sbjct: 377 DVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLK 436

Query: 542 VSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF-------------EISI 588
             + E         YT ++       ++  A  FF +M+ KG              E+++
Sbjct: 437 EEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTL 496

Query: 589 RDYTKSFFC--MMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                +F    +M+  G  PD     V++    + G+L     L   M+  GL PD
Sbjct: 497 SSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPD 552



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 138/300 (46%), Gaps = 18/300 (6%)

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG--LEPSAVTYTTFMNA 422
           +Y ++++ R+ P+IVT+N+L+  F K G+  +A  LL  ++  G     + VT+   ++ 
Sbjct: 224 VYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISF 283

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
              EG+++  + L+  M       +  TY  +I  L ++  +++A  L  +M   G+ P 
Sbjct: 284 LAREGHLENAVKLVDSMRLSKKA-SSFTYNPLITALLERGFVRKAEALQMEMENEGIMPT 342

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +TYN II    KC+    A     +M    L P   TYN L++  C  G+LK A  LL 
Sbjct: 343 VVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLG 402

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------- 592
            L+   ++ T + Y T+I  +C  GD+ +A     +MVE+G    +  YT          
Sbjct: 403 DLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVR 462

Query: 593 -----KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                + FF  MLS G  PD       + A          F+L  VM+  G+ PD    N
Sbjct: 463 NLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYN 522


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 206/396 (52%), Gaps = 3/396 (0%)

Query: 85  FLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLC 144
            L E       P++V+  +++ + C+L F   A  +F  M+   + PDAF Y ++I  LC
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 145 IAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIV 204
               ++ A  +   M + G  PD +TY++L        +     ++ +++L KG  P++V
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 205 TYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
           TY  ++ GYC+ G +++ L L   +   G   +   YS L+  +CK  R +EA   L+EM
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARE-LFEM 179

Query: 265 EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
            A G   D++ Y+  I GLCK  K+ +A  ++ +M     +P+  ++  I+  LC+   +
Sbjct: 180 -AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 325 TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA-VQLYRQLIEKRISPSIVTFNS 383
           +EA+   D  +   C+  V +  +++DG  K   + EA V L R L     +PS+VT+++
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSA 298

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           +I G CK  ++ DA  +L  ++  G  P  VTYT  ++A+C+ G +     L Q M  + 
Sbjct: 299 VIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERG 358

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
                V Y ++I+G C+  K+ EA+ ++E+M   G+
Sbjct: 359 CASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 201/387 (51%), Gaps = 3/387 (0%)

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           M   G+ P   ++  LI  LC      +AL+  + M    V+PDA  Y+++      +++
Sbjct: 5   MKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINK 64

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           +  A    ++++  G  PD VTYTVL+    +    E+G ++ E MLS+G    ++ Y+ 
Sbjct: 65  LDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYAT 124

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           +++  CK+GRID+AL L+  ++  G  P    YS LI GLCK D+  +A +L+ EM +  
Sbjct: 125 VVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF-EMAAGD 183

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           +  +   + + + GLC+   + EA+     +I + C  D V YN++I    K   + EA 
Sbjct: 184 VQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAK 242

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG-LEPSAVTYTTFMNA 422
           +L  Q +E++  P +     L+ G CK+ +V +A  +L+ +   G   PS VTY+  ++ 
Sbjct: 243 ELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDG 302

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
            C+   +     +LQ+M      P  VTYT +I   CK  +L EA +L + M+  G   D
Sbjct: 303 LCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASD 362

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQM 509
            + YN +IR +C+   + +A  ++ +M
Sbjct: 363 VVAYNILIRGYCRAAKVDEAIAMIEEM 389



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 193/382 (50%), Gaps = 3/382 (0%)

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
            +M   G+ P  +T+  L +    L+  + A ++  +++     PD   YTV+I   C+I
Sbjct: 3   GEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKI 62

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
             ++      E M+  G   + + Y+VL+ S+ K+ + ++   +  EM + G  P+LVTY
Sbjct: 63  NKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTY 122

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           + ++ G CK  ++ +A+ L   +     SP+   +  ++ GLC+ +   EAR  F+  + 
Sbjct: 123 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE--MA 180

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           +  +QDV++Y   I G  K G + EA  ++ ++IE   +P  V++N +IY  CK+ +V++
Sbjct: 181 AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 240

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVI 455
           A+ L+D        P     T  ++  C+   ++    +L+ M E     P+ VTY+ VI
Sbjct: 241 AKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVI 300

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            GLCK  +L +A  +L+ M   G  PD +TY  II +FCK   L +A +L  +M      
Sbjct: 301 DGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCA 360

Query: 516 PTSATYNILIDGLCVNGDLKNA 537
                YNILI G C    +  A
Sbjct: 361 SDVVAYNILIRGYCRAAKVDEA 382



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 192/396 (48%), Gaps = 3/396 (0%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
           L  ++K +     + T   +I  LC+ +    A+    +    +  P       ++   C
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           K+   ++A   F  M++ G  PD  +Y +L+H L  A   E+  +   +M   G  P+ +
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           TY+ +  G+    +I  A  ++++L   G  P    Y+ LI G C+    EE  +L E  
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE-- 178

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           ++ G   +VI Y+  +S +CK+G++DEA  +  +M   G  PD V+Y+++I  LCK ++V
Sbjct: 179 MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS-NCIQDVVLYNI 348
            +A +L ++   ++  P       ++ GLC+   + EA +  + ++ + +    VV Y+ 
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSA 298

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           +IDG  K   + +A  + +++      P +VT+ ++I  FCK G++ +AR L   +   G
Sbjct: 299 VIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERG 358

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
                V Y   +  YC    +   +A+++EM  + I
Sbjct: 359 CASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 181/378 (47%), Gaps = 45/378 (11%)

Query: 260 LLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLC 319
           LL EM+A G+ P +VT+  LIR LC+ +  +KA+Q++++M   ++ P++F +  ++  LC
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 320 EKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV 379
           +   +  A  YF+ ++ S C+ D V Y +++    K     +  Q++ +++ K  SP +V
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 380 TFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM 439
           T+ +++ G+CK G++  A  L+  +K  G  PS   Y+T ++  C+    +    L  EM
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF-EM 179

Query: 440 ETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDL 499
               +    + YT  I GLCK  KL EA  +   M   G  PD ++YN II S CK   +
Sbjct: 180 AAGDVQDV-IVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 500 RKAFQLLNQ------------------------------------MWLHNLEPTSATYNI 523
            +A +L++Q                                    +   +  P+  TY+ 
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSA 298

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           +IDGLC    L +A  +L  ++        V YT II A C  G + +A   F +M E+G
Sbjct: 299 VIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERG 358

Query: 584 -------FEISIRDYTKS 594
                  + I IR Y ++
Sbjct: 359 CASDVVAYNILIRGYCRA 376



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 179/389 (46%), Gaps = 5/389 (1%)

Query: 198 GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEA 257
           G  P IVT+  LI   C++    + L++   M+    K +   Y+V++  +CK  ++D A
Sbjct: 9   GITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLA 68

Query: 258 LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLG 317
                +M   G  PD VTY++L+  L K  K  +  Q++ EM SK  SP    +  ++ G
Sbjct: 69  ASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNG 128

Query: 318 LCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPS 377
            C+   I +A      L  +       LY+ +IDG  K     EA +L+           
Sbjct: 129 YCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAGD--VQD 186

Query: 378 IVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL- 436
           ++ + S I G CK GK+ +A+ +   +   G  P  V+Y   + + C++  +     L+ 
Sbjct: 187 VIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMD 246

Query: 437 QEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIG-VTPDQITYNTIIRSFCK 495
           Q ME K + P     TV++ GLCK  +++EA  +LE M   G   P  +TY+ +I   CK
Sbjct: 247 QAMERKCM-PGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCK 305

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              L  A+ +L +M      P   TY  +ID  C  G L  A  L   + E   +   VA
Sbjct: 306 ADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVA 365

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           Y  +I+ +C    V +A+    +M  +G 
Sbjct: 366 YNILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 194/396 (48%), Gaps = 6/396 (1%)

Query: 18  VIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLC 74
           ++ +MK   +  +I T+ SL   L  L  T+    ++  +   +   + +  ++VI  LC
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 75  QQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAF 134
           + ++L  A  + ++       P  V+   ++    K    E    +F  ML  G  P+  
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 135 SYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKL 194
           +Y  +++G C AG +++AL     +   G  P    YS L  G     +   A ++ +  
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE-- 178

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           +  G   D++ YT  I G C+ G ++E   +   M+  G   + ++Y+V++ S+CK  R+
Sbjct: 179 MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC-SKRISPNSFAHGA 313
            EA  L+ +       P +   ++L+ GLCK  +V +A  +   M  +   +P+   + A
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSA 298

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKR 373
           ++ GLC+ + + +A +    +  + C+ DVV Y  +ID + K+G + EA +L++++ E+ 
Sbjct: 299 VIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERG 358

Query: 374 ISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
            +  +V +N LI G+C+  KV +A  +++ +   G+
Sbjct: 359 CASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 160/659 (24%), Positives = 289/659 (43%), Gaps = 20/659 (3%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVY 64
            + G V +A+ +  +MK+  +     +YNSL+      D   D   L+  + +     N Y
Sbjct: 472  QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 531

Query: 65   TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
            T+ + I+   +      AI   +    K   P VV+ NA++    K G   +AK +F  +
Sbjct: 532  THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 591

Query: 125  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
               G+ PD  +Y ++I     A   +EA++   DM  +   PD +  + L    +   + 
Sbjct: 592  KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG 651

Query: 185  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
              AW++  +L     +P   TY  L+ G  + G V+E + L E M    +  N+I Y+ +
Sbjct: 652  DEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTI 711

Query: 245  LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
            L  +CK+G +++AL +LY M   G  PDL +Y+ +I GL K+++ ++A  ++ +M  K +
Sbjct: 712  LDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVL 770

Query: 305  SPNSFAHGAILLGLCEKEMITEA-RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+      IL    +  ++ EA  +  D  +      D    + +++G +K   I +++
Sbjct: 771  IPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSI 830

Query: 364  QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            +    +    I+        LI   CK  K  +A  L+   K  G+      Y + +   
Sbjct: 831  EFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGL 890

Query: 424  CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
             +E  I     L  EM+    GP   TY +++  + K  +++E +++ E+M+  G     
Sbjct: 891  VDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTY 950

Query: 484  ITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVS 543
            +TYNTII    K + L +A  L   +      PT  TY  L+DGL   G +++A+ L   
Sbjct: 951  VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 1010

Query: 544  LQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT----------- 592
            + E+        Y  ++  H   G+  K    F  MV++G    I+ YT           
Sbjct: 1011 MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQ 1070

Query: 593  ----KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
                 ++F  +L  G  PD     +++    +   L     L   M K G++P+ +  N
Sbjct: 1071 LNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1129



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 231/503 (45%), Gaps = 3/503 (0%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDI---MWDLYDDIKVSETPRNVYTN 66
           G +  A   +  MKE  + ++  TYN L+Y L  +       ++Y  + V     +V T 
Sbjct: 264 GGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTY 323

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S+++    ++  ++  +  L+E       P+V S    +    +    + A  +   M  
Sbjct: 324 SVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMEN 383

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD  ++ +LI  LC AG + +A +    M +   +PD +TY  L   F        
Sbjct: 384 EGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQS 443

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
             ++   +   G + ++V YT +I   CQ+G V E L++ + M  +G      +Y+ L+S
Sbjct: 444 VMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLIS 503

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
              K+ R  +AL L   M+  G KP+  T+ + I    K  +  KAIQ Y  M SK I P
Sbjct: 504 GFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVP 563

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +  A  A+L GL +   +  A+  F  L       D + Y +MI    K     EAV+++
Sbjct: 564 DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 623

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
             +IE    P ++  NSLI    K G+  +A R+   +K   LEP+  TY T +     E
Sbjct: 624 YDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGRE 683

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G ++ ++ LL+EM      P  +TY  ++  LCK   + +A+ +L  M   G  PD  +Y
Sbjct: 684 GKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSY 743

Query: 487 NTIIRSFCKCKDLRKAFQLLNQM 509
           NT+I    K +   +AF +  QM
Sbjct: 744 NTVIYGLVKEERYNEAFSIFCQM 766



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 221/461 (47%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
           +M + G+  +A++YN L++ L  +G   EALE    M   GV P   TYS+L   F    
Sbjct: 275 VMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRR 334

Query: 183 QISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +     +++++   G  P++ +YT+ I    Q    +E  ++   M ++G K +VI ++
Sbjct: 335 DVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHT 394

Query: 243 VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
           VL+  +C +GRI +A  + ++M+    KPD VTY  L+            ++++N M + 
Sbjct: 395 VLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKAD 454

Query: 303 RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
             + N  A+ A++  LC+   + EA   FD +     + +   YN +I G++K    G+A
Sbjct: 455 GYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDA 514

Query: 363 VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
           ++L++ +      P+  T    I  + K+G+   A +  + +K  G+ P  V     +  
Sbjct: 515 LELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFG 574

Query: 423 YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
             + G +     +  E++   + P  +TYT++IK   K  K  EAV++  DM      PD
Sbjct: 575 LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 634

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
            +  N++I +  K     +A+++  Q+   NLEPT  TYN L+ GL   G +K    LL 
Sbjct: 635 VLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE 694

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
            +   N     + Y TI+   C  G V+ A+     M  KG
Sbjct: 695 EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 735



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 141/543 (25%), Positives = 243/543 (44%), Gaps = 44/543 (8%)

Query: 8    RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL----RHTDIMWDLYDDIKVSETPRNV 63
            + G   +A  +  ++KE++L+ +  TYN+LL  L    +  ++M  L +++  S  P N+
Sbjct: 647  KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVM-HLLEEMYHSNYPPNL 705

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             T + ++D LC+   + DA+  L     K   P + S N ++    K      A  +FC 
Sbjct: 706  ITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ 765

Query: 124  MLK-------------------------------YGLHP----DAFSYNILIHGLCIAGS 148
            M K                               Y L P    D  S + L+ G+     
Sbjct: 766  MKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAG 825

Query: 149  MEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG--AWKVIQKLLIKGSDPDIVTY 206
            +E+++EF   +   G+  D      L K  HL  Q     A ++++K    G       Y
Sbjct: 826  IEKSIEFAEIIASSGITLDDFFLCPLIK--HLCKQKKALEAHELVKKFKSFGVSLKTGLY 883

Query: 207  TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
              LICG      ++    L   M   G   +   Y++LL +M KS RI+E L +  EM  
Sbjct: 884  NSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 943

Query: 267  VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
             G +   VTY+ +I GL K  ++ +AI LY  + S+  SP    +G +L GL +   I +
Sbjct: 944  KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIED 1003

Query: 327  ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIY 386
            A   F+ ++   C  +  +YNI+++G+   GN  +   L++ ++++ I+P I ++  +I 
Sbjct: 1004 AENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 1063

Query: 387  GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
              CK G++ D       +   GLEP  +TY   ++   +   ++  ++L  EM+ K I P
Sbjct: 1064 TLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVP 1123

Query: 447  THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
               TY  +I  L K  K  EA ++ E++   G  P+  TYN +IR +        A+   
Sbjct: 1124 NLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAY 1183

Query: 507  NQM 509
             +M
Sbjct: 1184 GRM 1186



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 136/570 (23%), Positives = 244/570 (42%), Gaps = 40/570 (7%)

Query: 7    SRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNV 63
            S+     +AV +   M E +    +   NSL   LY     D  W ++  +K        
Sbjct: 611  SKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTD 670

Query: 64   YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
             T + ++ GL ++ ++++ +  L+E     + P++++ N I+   CK G    A  +   
Sbjct: 671  GTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS 730

Query: 124  MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
            M   G  PD  SYN +I+GL       EA      M +  + PD  T   +   F  +  
Sbjct: 731  MTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGL 789

Query: 184  ISGAWKVIQKLLIK-GSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYS 242
            +  A  +I+   ++ GS  D  +   L+ G  +   +E+ ++  E++ S G  L+     
Sbjct: 790  MKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLC 849

Query: 243  VLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSK 302
             L+  +CK  +  EA  L+ + ++ G+      Y+ LI GL  ++ +  A  L+ EM   
Sbjct: 850  PLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL 909

Query: 303  RISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEA 362
               P+ F +  +L  + +   I E     + +         V YN +I G VK   + +A
Sbjct: 910  GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 969

Query: 363  VQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNA 422
            + LY  L+ +  SP+  T+  L+ G  K G++ DA  L + +  +G + +   Y   +N 
Sbjct: 970  IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 1029

Query: 423  YCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW-------------------- 462
            +   GN +++  L Q+M  + I P   +YT++I  LCK                      
Sbjct: 1030 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 1089

Query: 463  ---------------KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
                           +L+EAV L  +M   G+ P+  TYN++I    K     +A ++  
Sbjct: 1090 LITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYE 1149

Query: 508  QMWLHNLEPTSATYNILIDGLCVNGDLKNA 537
            ++     +P   TYN LI G  V+G   +A
Sbjct: 1150 ELLTKGWKPNVFTYNALIRGYSVSGSTDSA 1179



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 192/447 (42%), Gaps = 7/447 (1%)

Query: 139 LIHGLCIAGSMEEALEFTNDMGRH---GVEPDAITYSI-LAKGFHLLSQISGAWKVIQKL 194
           +IH L  A    EALE      R         +  Y + L +G   +  ++  + V+Q+ 
Sbjct: 185 VIHALRSADGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ 244

Query: 195 LIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRI 254
           ++K    ++ T+  +  G    G +        VM   G  LN   Y+ L+  + KSG  
Sbjct: 245 IVKA---NVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFD 301

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            EAL +   M   G+ P + TYS+L+    K+  V   + L  EM +  + PN +++   
Sbjct: 302 REALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTIC 361

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           +  L + +   EA      +    C  DV+ + ++I      G I +A  ++ ++ +   
Sbjct: 362 IRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 421

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P  VT+ +L+  F  NG       + + +K  G   + V YT  ++A C+ G +   L 
Sbjct: 422 KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE 481

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +  EM+ K I P   +Y  +I G  K  +  +A++L + M + G  P+  T+   I  + 
Sbjct: 482 MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYG 541

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K  +  KA Q    M    + P     N ++ GL  +G L  A  +   L+   +S   +
Sbjct: 542 KSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 601

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVE 581
            YT +IK         +A+  F  M+E
Sbjct: 602 TYTMMIKCCSKASKFDEAVKIFYDMIE 628



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 170/339 (50%), Gaps = 39/339 (11%)

Query: 69   VIDGLCQQSRLQDAILFLQETAGKEFGPSVVS--LNAIMSRYCKLGFAEVAKGLFCLMLK 126
            +I  LC+Q +  +A   +++   K FG S+ +   N+++         ++A+GLF  M +
Sbjct: 851  LIKHLCKQKKALEAHELVKKF--KSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKE 908

Query: 127  YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG--------- 177
             G  PD F+YN+L+  +  +  +EE L+   +M R G E   +TY+ +  G         
Sbjct: 909  LGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQ 968

Query: 178  -----FHLLSQ---------------------ISGAWKVIQKLLIKGSDPDIVTYTVLIC 211
                 ++L+SQ                     I  A  +  ++L  G   +   Y +L+ 
Sbjct: 969  AIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLN 1028

Query: 212  GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
            G+   GN E+   L + M+ QG   ++ +Y++++ ++CK+G++++ L    ++  +GL+P
Sbjct: 1029 GHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEP 1088

Query: 272  DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYF 331
            DL+TY++LI GL K  ++ +A+ L+NEM  K I PN + + +++L L +     EA   +
Sbjct: 1089 DLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMY 1148

Query: 332  DSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLI 370
            + L+      +V  YN +I GY   G+   A   Y ++I
Sbjct: 1149 EELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMI 1187



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/313 (21%), Positives = 130/313 (41%), Gaps = 15/313 (4%)

Query: 347 NIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           N M++     G +G+  +++  +  + +  ++ TF ++  G    G +  A   L  +K 
Sbjct: 219 NYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKE 278

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+  +A TY   +    + G  +  L + + M    + P+  TY+V++    K+  ++ 
Sbjct: 279 AGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVET 338

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
            + LL +M   GV P+  +Y   IR   + K   +A+++L +M     +P   T+ +LI 
Sbjct: 339 VLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQ 398

Query: 527 GLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI 586
            LC  G + +A  +   +++ +    +V Y T++      GD    M  +  M   G+  
Sbjct: 399 VLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYND 458

Query: 587 SIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           ++  YT                  F  M   G  P+Q     ++  F +    G   EL 
Sbjct: 459 NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 518

Query: 632 AVMIKSGLLPDKF 644
             M   G  P+ +
Sbjct: 519 KHMDIHGPKPNGY 531


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 235/490 (47%), Gaps = 13/490 (2%)

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           Y K   AE     F  M++ G  P   + NI++  L  +  M +A      M  HG+ P 
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237

Query: 168 AITY-SILAKGFHL--LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            IT+ ++L   F    L ++   W  +++  I+ S+   VTY +LI G+ + G +EE  +
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSE---VTYNILINGFSKNGKMEEARR 294

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
               M   GF +   +++ L+   CK G  D+A G+  EM   G+ P   TY+I I  LC
Sbjct: 295 FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC 354

Query: 285 KQDKVHKAIQLYNEMCSKRI-SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
              ++  A +L + M +  + S N+  HG I +G        EA + FD L   +    +
Sbjct: 355 DFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMG-----KFVEASLLFDDLRAGDIHPSI 409

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V YN +IDG  + GN+  A +L  ++  + I P ++T+ +L+ GF KNG ++ A  + D 
Sbjct: 410 VTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDE 469

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEM-ETKAIGPTHVTYTVVIKGLCKQW 462
           +   G++P    YTT        G+  +   L +EM  T    P    Y V I GLCK  
Sbjct: 470 MLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVG 529

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
            L +A++    ++ +G+ PD +TY T+IR + +    + A  L ++M    L P+  TY 
Sbjct: 530 NLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYF 589

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           +LI G    G L+ A      +++  +    + +  ++   C  G++ +A  + C+M E+
Sbjct: 590 VLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE 649

Query: 583 GFEISIRDYT 592
           G   +   YT
Sbjct: 650 GIPPNKYSYT 659



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 241/498 (48%), Gaps = 14/498 (2%)

Query: 11  MVHDAVFVIAKMKELDLKVSIQTYNSLLY------NLRHTDIMWDLYDDIKVSETPRNVY 64
           M++ A  V   M E  +  ++ T+N++L       +L   D +W    ++K      +  
Sbjct: 218 MMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWL---EMKRRNIEFSEV 274

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T +I+I+G  +  ++++A  F  +     F  +  S N ++  YCK G  + A G+   M
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 334

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           L  G++P   +YNI I  LC  G +++A E  + M      PD ++Y+ L  G+  + + 
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKF 390

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +   L      P IVTY  LI G C+ GN+E   +L+E M +Q    +VI Y+ L
Sbjct: 391 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 450

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM-CSKR 303
           +    K+G +  A  +  EM   G+KPD   Y+    G  +     KA +L+ EM  +  
Sbjct: 451 VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDH 510

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
            +P+   +   + GLC+   + +A  +   +     + D V Y  +I GY++ G    A 
Sbjct: 511 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 570

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
            LY +++ KR+ PS++T+  LIYG  K G++  A +    +K  G+ P+ +T+   +   
Sbjct: 571 NLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGM 630

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C+ GNI      L +ME + I P   +YT++I   C   K +E V+L ++M    + PD 
Sbjct: 631 CKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDG 690

Query: 484 ITYNTIIRSFCKCKDLRK 501
            T+  + +   K  + R+
Sbjct: 691 YTHRALFKHLEKDHESRE 708



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 255/533 (47%), Gaps = 16/533 (3%)

Query: 4   FVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETP 60
           +VY++  M    +    KM       S++  N +L  LR + +M     +Y+ +      
Sbjct: 176 WVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIM 235

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
             V T + ++D   +   L+       E   +    S V+ N +++ + K G  E A+  
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M + G     +S+N LI G C  G  ++A   T++M   G+ P   TY+I       
Sbjct: 296 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +I  A    ++LL   + PD+V+Y  L+ GY ++G   E   L + + +     +++ 
Sbjct: 356 FGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y+ L+  +C+SG ++ A  L  EM    + PD++TY+ L++G  K   +  A ++Y+EM 
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471

Query: 301 SKRISPNSFAH-----GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
            K I P+ +A+     G + LG  +K      R++ + +   +   D+ +YN+ IDG  K
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAF----RLHEEMVATDHHAPDLTIYNVRIDGLCK 527

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +GN+ +A++  R++    + P  VT+ ++I G+ +NG+   AR L D +    L PS +T
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMY 475
           Y   +  + + G +++      EM+ + + P  +T+  ++ G+CK   + EA + L  M 
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKME 647

Query: 476 VIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
             G+ P++ +Y  +I   C  +   +  +L  +M    +EP   T+  L   L
Sbjct: 648 EEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 210/435 (48%), Gaps = 5/435 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+V++ N ++    K G  E    ++  M +  +     +YNILI+G    G MEEA  F
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             DM R G      +++ L +G+        AW V  ++L  G  P   TY + IC  C 
Sbjct: 296 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            G +++  +L   M +     +V++Y+ L+    K G+  EA  L  ++ A  + P +VT
Sbjct: 356 FGRIDDARELLSSMAAP----DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ LI GLC+   +  A +L  EM ++ I P+   +  ++ G  +   ++ A   +D ++
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE-KRISPSIVTFNSLIYGFCKNGKV 394
                 D   Y     G ++LG+  +A +L+ +++     +P +  +N  I G CK G +
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
             A      I   GL P  VTYTT +  Y E G  +    L  EM  K + P+ +TY V+
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 591

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I G  K  +L++A Q   +M   GV P+ +T+N ++   CK  ++ +A++ L +M    +
Sbjct: 592 IYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 651

Query: 515 EPTSATYNILIDGLC 529
            P   +Y +LI   C
Sbjct: 652 PPNKYSYTMLISKNC 666



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 209/466 (44%), Gaps = 20/466 (4%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M R G  P     +I+ K       ++ A  V + ++  G  P ++T+  ++    + G+
Sbjct: 194 MIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD 253

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           +E   K+   M  +  + + + Y++L++   K+G+++EA     +M   G      +++ 
Sbjct: 254 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNP 313

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           LI G CKQ     A  + +EM +  I P +  +   +  LC+   I +AR     L+ S 
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR----ELLSSM 369

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              DVV YN ++ GY+K+G   EA  L+  L    I PSIVT+N+LI G C++G +  A+
Sbjct: 370 AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ 429

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
           RL + +    + P  +TYTT +  + + GN+     +  EM  K I P    YT    G 
Sbjct: 430 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGE 489

Query: 459 CKQWKLQEAVQLLEDMYVIGV-TPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
            +     +A +L E+M       PD   YN  I   CK  +L KA +   +++   L P 
Sbjct: 490 LRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPD 549

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
             TY  +I G   NG  K A  L   +    +  + + Y  +I  H   G + +A  +  
Sbjct: 550 HVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYST 609

Query: 578 QMVEKGFEISIR---------------DYTKSFFCMMLSNGFPPDQ 608
           +M ++G   ++                D    + C M   G PP++
Sbjct: 610 EMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNK 655



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 179/367 (48%), Gaps = 44/367 (11%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTN 66
           G + DA  +++ M   D    + +YN+L++         +   L+DD++  +   ++ T 
Sbjct: 357 GRIDDARELLSSMAAPD----VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           + +IDGLC+   L+ A    +E   +   P V++   ++  + K G   +A  ++  ML+
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472

Query: 127 YGLHPDAFSY------------------------------------NILIHGLCIAGSME 150
            G+ PD ++Y                                    N+ I GLC  G++ 
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
           +A+EF   + R G+ PD +TY+ + +G+    Q   A  +  ++L K   P ++TY VLI
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G+ + G +E+  +    M  +G + NV+ ++ LL  MCK+G IDEA   L +ME  G+ 
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP 652

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P+  +Y++LI   C  +K  + ++LY EM  K I P+ + H A+   L EK+  +    +
Sbjct: 653 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL-EKDHESREVEF 711

Query: 331 FDSLIMS 337
            + L++S
Sbjct: 712 LERLLLS 718



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 175/374 (46%), Gaps = 20/374 (5%)

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K+    K +  + +M  K   P+      +L  L +  M+ +A   ++++I    +  V+
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            +N M+D   K G++    +++ ++  + I  S VT+N LI GF KNGK+ +ARR    +
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           +  G   +  ++   +  YC++G       +  EM    I PT  TY + I  LC   ++
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            +A +LL  M      PD ++YNT++  + K     +A  L + +   ++ P+  TYN L
Sbjct: 360 DDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           IDGLC +G+L+ A  L   +    I    + YTT++K     G++  A   + +M+ KG 
Sbjct: 416 IDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475

Query: 585 -------------EISIRDYTKSFFC---MMLSNGFPPDQEICEVMLIAFHQGGDLGSVF 628
                        E+ + D  K+F     M+ ++   PD  I  V +    + G+L    
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535

Query: 629 ELAAVMIKSGLLPD 642
           E    + + GL+PD
Sbjct: 536 EFQRKIFRVGLVPD 549



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 138/294 (46%), Gaps = 19/294 (6%)

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           + ++I K   PS+   N ++     +  +  A  + +T+  HG+ P+ +T+ T +++  +
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
            G+++R+  +  EM+ + I  + VTY ++I G  K  K++EA +   DM   G      +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQ 545
           +N +I  +CK      A+ + ++M    + PT++TYNI I  LC  G + +A  LL S+ 
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370

Query: 546 EHNISLTKVAYTTIIKAHCA---------------EGDVHKAMTFFCQMVEKGFEISIRD 590
             ++    V+Y T++  +                  GD+H ++  +  +++   E    +
Sbjct: 371 APDV----VSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426

Query: 591 YTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
             +     M +    PD      ++  F + G+L    E+   M++ G+ PD +
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 480


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 214/435 (49%), Gaps = 15/435 (3%)

Query: 220 EEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG--LKPDLVTYS 277
           E+   + + +L +G   +V +Y++LL+ +C   R  EAL LL+ M   G    PD+V+YS
Sbjct: 34  EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 278 ILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMS 337
            +I G  K+  + K       M  +RISPN   + +I+  LC+ + + +A     +++ S
Sbjct: 93  TVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 338 NCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADA 397
             + D + YN ++ G+   G   EA+   +++    + P +VT+NSL+   CKNG+  +A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 398 RRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKG 457
           R++ D++   GL+P   TY T +  Y  +G +  +  LL  M    I P H  +++++  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 458 LCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPT 517
             KQ K++EA+ +   M   G+ P+ +TY T+I   CK   +  A     QM    L P 
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325

Query: 518 SATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFC 577
           S  YN LI  LC+    + A+ L + + +  I L+ + + +II +HC EG V ++   F 
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFD 385

Query: 578 QMVEKGFEISI-----RDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAA 632
            MV  G +  I      D  K  F    SNG  P+     +M       G L  + +L  
Sbjct: 386 LMVRIGVKPDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFL 445

Query: 633 VMIKSGLLPDKFLIN 647
            M  +G   D  ++N
Sbjct: 446 SMEDNGCTVDSGMLN 460



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 253/491 (51%), Gaps = 22/491 (4%)

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE--PDAITYS 172
           E A+ +F  +L+ G+ PD FSYNIL++GLC     +EALE  + M   G +  PD ++YS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            +  GF            + K+L +   P++VTY  +I   C+   V++ +++   M+  
Sbjct: 93  TVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   + + Y+ ++   C SG+  EA+  L +M + G++PD+VTY+ L+  LCK  +  +A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            ++++ M  + + P+   +G +L G   K  + E     D ++ +    +  +++I++  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           Y K   + EA+ ++ ++ ++ ++P+ VT+ ++I   CK+G+V DA    + +   GL P 
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
           ++ Y + +++ C     ++   L  EM  + I  + + +  +I   CK+ ++ E+ +L +
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFD 385

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
            M  IGV PD IT    +    + KDL  AF        + L P   TY ++ + +   G
Sbjct: 386 LMVRIGVKPDIIT----LGRNDEAKDLFVAFS------SNGLVPNYWTYRLMAENIIGQG 435

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
            L+  D L +S++++  ++       I++     G++ +A T+   + EK F  S+   T
Sbjct: 436 LLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF--SLEAST 493

Query: 593 KSFFCMMLSNG 603
            S F  +LS G
Sbjct: 494 ASLFIDLLSGG 504



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 241/479 (50%), Gaps = 20/479 (4%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETA--GKEFGPSVVSLNAIMSR 107
           ++D++     P +V++ +I+++GLC ++R Q+A+  L   A  G +  P VVS + +++ 
Sbjct: 39  VFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           + K       +G    ML   + P+  +YN +I  LC A ++++A+E    M + GV PD
Sbjct: 98  FFK-------EGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 150

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            +TY+ +  GF    Q   A   ++K+   G +PD+VTY  L+   C+ G   E  K+ +
Sbjct: 151 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 210

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M  +G K ++  Y  LL      G + E  GLL  M   G+ P+   +SIL+    KQ+
Sbjct: 211 SMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 270

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           KV +A+ ++++M  + ++PN+  +G ++  LC+   + +A +YF+ +I      D ++YN
Sbjct: 271 KVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYN 330

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            +I          +A +L+ +++++ I  S + FNS+I   CK G+V ++ +L D +   
Sbjct: 331 SLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRI 390

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
           G++P  +T           G       L     +  + P + TY ++ + +  Q  L+E 
Sbjct: 391 GVKPDIITL----------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 440

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
            QL   M   G T D    N I+R   +  ++ +A   L+ +   +    ++T ++ ID
Sbjct: 441 DQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 499



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 146/330 (44%), Gaps = 15/330 (4%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLL----YNLRHTDIMWDLYDDIKVSETPR 61
           +  +G   +A+  + KM+   ++  + TYNSL+     N R T+    ++D +       
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE-ARKIFDSMTKRGLKP 219

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           ++ T   ++ G   +  L +    L         P+    + ++  Y K    E A  +F
Sbjct: 220 DITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVF 279

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M + GL+P+A +Y  +I  LC +G +E+A+ +   M   G+ PD+I Y+ L     + 
Sbjct: 280 SKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIF 339

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A ++  ++L +G     + +  +I  +C+ G V E  KL ++M+  G K ++I  
Sbjct: 340 DKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITL 399

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
                     GR DEA  L     + GL P+  TY ++   +  Q  + +  QL+  M  
Sbjct: 400 ----------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 449

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYF 331
              + +S     I+  L ++  IT A  Y 
Sbjct: 450 NGCTVDSGMLNFIVRELLQRGEITRAGTYL 479



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 32/170 (18%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETP 60
           +L   Y++   V +A+ V +KM++  L  +  TY +                        
Sbjct: 261 ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT------------------------ 296

Query: 61  RNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
                   VID LC+  R++DA+L+ ++   +   P  +  N+++   C     E A+ L
Sbjct: 297 --------VIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEEL 348

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAIT 170
           F  ML  G+      +N +I   C  G + E+ +  + M R GV+PD IT
Sbjct: 349 FLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398



 Score = 40.0 bits (92), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 15/168 (8%)

Query: 5   VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 64
           V  ++G V DA+    +M +  L+     YNSL+++L   D  W+  +++ +    R + 
Sbjct: 300 VLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFD-KWEKAEELFLEMLDRGIC 358

Query: 65  TNSI----VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            ++I    +ID  C++ R+ ++             P +++          LG  + AK L
Sbjct: 359 LSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT----------LGRNDEAKDL 408

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDA 168
           F      GL P+ ++Y ++   +   G +EE  +    M  +G   D+
Sbjct: 409 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDS 456


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 208/424 (49%), Gaps = 35/424 (8%)

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S++++         DAI   +            S   +  R  KL     A   +  +L 
Sbjct: 159 SVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILD 218

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G  PD   +N+L+H LC    + EA     ++G+ G+ P                    
Sbjct: 219 CGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPT------------------- 259

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
                           +V++  LI GYC+ GN+++G +L+  M+      +V  YSVL++
Sbjct: 260 ----------------VVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLIN 303

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
            +CK G++D+A  L  EM   GL P+ VT++ LI G C   +    +++Y +M  K + P
Sbjct: 304 GLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKP 363

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           +   +  ++ GLC+   + EA+     +       D   Y ++IDG  K G++  A+++ 
Sbjct: 364 DVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIR 423

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           ++++++ I    V F +LI GFC+ G+V +A R L  +   G++P   TYT  ++ +C++
Sbjct: 424 KEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKK 483

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G+++    LL+EM+     P  VTY V++ GLCKQ +++ A  LL+ M  +GV PD ITY
Sbjct: 484 GDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITY 543

Query: 487 NTII 490
           N ++
Sbjct: 544 NILL 547



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 225/449 (50%), Gaps = 27/449 (6%)

Query: 135 SYNILIHGLCIAGSMEEALE-----------------FTNDMGRHGVEPDAITYSILAKG 177
           SY  + H LC    + EA                   FT+ +   G     + +S+L   
Sbjct: 105 SYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNA 164

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC-----QIGNVEEGLKLREVMLSQ 232
           +      S A +  +  L++  +  I  ++   CGY      ++          E +L  
Sbjct: 165 YTDSGYFSDAIQCFR--LVRKHNLQIPFHS---CGYLFDRLMKLNLTSPAWAFYEEILDC 219

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G+  +V  ++VL+  +CK  +I+EA  L  E+   GL+P +V+++ LI G CK   + + 
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
            +L   M   R+ P+ F +  ++ GLC++  + +A   F  +     + + V +  +I+G
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
           +   G     +++Y+Q++ K + P ++T+N+LI G CK G + +A++L+  +   GL+P 
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399

Query: 413 AVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLE 472
             TYT  ++  C+EG+++  L + +EM  + I   +V +T +I G C++ ++ EA + L 
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459

Query: 473 DMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNG 532
           +M   G+ PD  TY  +I  FCK  D++  F+LL +M      P   TYN+L++GLC  G
Sbjct: 460 EMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519

Query: 533 DLKNADCLLVSLQEHNISLTKVAYTTIIK 561
            +KNA+ LL ++    +    + Y  +++
Sbjct: 520 QMKNANMLLDAMLNLGVVPDDITYNILLE 548



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 195/389 (50%), Gaps = 38/389 (9%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVS 57
           +L   Y+ +G   DA+     +++ +L++   +   L   L  L  T   W  Y++I   
Sbjct: 160 VLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDC 219

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
             P +V   ++++  LC++ ++ +A L   E   +   P+VVS N +++ YCK G  +  
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEA------------------------- 152
             L   M++  + PD F+Y++LI+GLC  G +++A                         
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339

Query: 153 ----------LEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
                     +E    M R GV+PD ITY+ L  G   +  +  A K++ ++  +G  PD
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
             TYT+LI G C+ G++E  L++R+ M+ +G +L+ +A++ L+S  C+ G++ EA   L 
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           EM   G+KPD  TY+++I G CK+  V    +L  EM      P    +  +L GLC++ 
Sbjct: 460 EMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMID 351
            +  A M  D+++    + D + YNI+++
Sbjct: 520 QMKNANMLLDAMLNLGVVPDDITYNILLE 548



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 202/446 (45%), Gaps = 32/446 (7%)

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLY-----------------EMEAVGLKPDLVTY 276
           F+L++ +Y  +   +C    + EA  LL                   +EA G     + +
Sbjct: 99  FRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVF 158

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           S+L+           AIQ +  +    +     + G +   L +  + + A  +++ ++ 
Sbjct: 159 SVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILD 218

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
                DV  +N+++    K   I EA  L+ ++ ++ + P++V+FN+LI G+CK+G +  
Sbjct: 219 CGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQ 278

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
             RL   +  + + P   TY+  +N  C+EG +     L  EM  + + P  VT+T +I 
Sbjct: 279 GFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLIN 338

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           G C   +    +++ + M   GV PD ITYNT+I   CK  DLR+A +L+ +M    L+P
Sbjct: 339 GHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFF 576
              TY +LIDG C  GDL++A  +   + +  I L  VA+T +I   C EG V +A    
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTL 458

Query: 577 CQMVEKGFEISIRDYTKSF--FCM-------------MLSNGFPPDQEICEVMLIAFHQG 621
            +M+E G +     YT     FC              M  +G  P      V+L    + 
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518

Query: 622 GDLGSVFELAAVMIKSGLLPDKFLIN 647
           G + +   L   M+  G++PD    N
Sbjct: 519 GQMKNANMLLDAMLNLGVVPDDITYN 544


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 217/427 (50%), Gaps = 1/427 (0%)

Query: 157  NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
            ++M   GV PD+ TY  +  G+     +  A + I +++ +G   D  T T++I  +C+ 
Sbjct: 820  DEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEK 879

Query: 217  GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
              V   +     +   G   N+I YS ++S +CK G + +A  LL EM   G KP++ T+
Sbjct: 880  SLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTH 939

Query: 277  SILIRGLCKQDKVHKAIQLYNEMC-SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
            + LI GLCK+    +A +L+ ++  S    PN   + A++ G C++E ++ A M F+ + 
Sbjct: 940  TSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMK 999

Query: 336  MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
                + +   Y  +IDG+ K GN  +A +L   +  +   P+  T+NS++ G CK G+  
Sbjct: 1000 EQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAE 1059

Query: 396  DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            +A +LL+T   + +E   VTYT  ++  C+  ++ + L  L +M      P    YT +I
Sbjct: 1060 EAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLI 1119

Query: 456  KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
               C+Q  ++++ +L +++  +G+ P + TY ++I  +C+ K +  A +   +M  H   
Sbjct: 1120 AAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCA 1179

Query: 516  PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
            P S +Y  LI GLC    L  A  L  ++ +  +S  +V   T+   +C   D   AM  
Sbjct: 1180 PDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVI 1239

Query: 576  FCQMVEK 582
              ++ +K
Sbjct: 1240 LERLNKK 1246



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 236/503 (46%), Gaps = 13/503 (2%)

Query: 86   LQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCI 145
              E + +   P   +   I+  YC+ G    A    C M++ G   D  +  ++I   C 
Sbjct: 819  FDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCE 878

Query: 146  AGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVT 205
               +  A+ F + + + G+ P+ I YS +  G      +  A++++++++  G  P++ T
Sbjct: 879  KSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYT 938

Query: 206  YTVLICGYCQIGNVEEGLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEM 264
            +T LI G C+ G  E   +L  +++ S  +K NV  Y+ ++S  CK  ++  A  L   M
Sbjct: 939  HTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERM 998

Query: 265  EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMI 324
            +  GL P+  TY+ LI G CK     KA +L   M ++   PN+  + +I+ GLC++   
Sbjct: 999  KEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRA 1058

Query: 325  TEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSL 384
             EA    ++   +    D V Y I+I    K  ++ +A+    ++ +    P I  + +L
Sbjct: 1059 EEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTL 1118

Query: 385  IYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
            I  FC+   + D+ +L D +   GL P+  TYT+ +  YC E  +   +   Q+M     
Sbjct: 1119 IAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGC 1178

Query: 445  GPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQ 504
             P  ++Y  +I GLCK+ +L EA QL + M   G++P ++T  T+   +CK +D   A  
Sbjct: 1179 APDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMV 1238

Query: 505  LL----NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTII 560
            +L     ++W+        T + LI  LC    +  A      L +  +++ +V      
Sbjct: 1239 ILERLNKKLWIR-------TVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFN 1291

Query: 561  KAHCAEGDVHKAMTFFCQMVEKG 583
             A C E + +  ++   + + KG
Sbjct: 1292 TA-CIESNKYALVSDLSERISKG 1313



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 232/478 (48%), Gaps = 12/478 (2%)

Query: 5    VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPR 61
            V++  G + +AV +I  M+   L ++ +  N ++     +R  +   +++D++    + R
Sbjct: 770  VFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEM----SAR 825

Query: 62   NVYTNSI----VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
             VY +S     +I G C+   + +A  ++ E   + F     +L  I++ +C+      A
Sbjct: 826  GVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRA 885

Query: 118  KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
               F  + K GL P+  +Y+ +I GLC  GS+++A E   +M ++G +P+  T++ L  G
Sbjct: 886  VWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHG 945

Query: 178  FHLLSQISGAWKVIQKLLIKGS-DPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
                     A+++  KL+   +  P++ TYT +I GYC+   +     L E M  QG   
Sbjct: 946  LCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVP 1005

Query: 237  NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
            N   Y+ L+   CK+G   +A  L+  M   G  P+  TY+ ++ GLCK+ +  +A +L 
Sbjct: 1006 NTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLL 1065

Query: 297  NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
            N     +I  +   +  ++   C++  + +A ++ + +       D+ LY  +I  + + 
Sbjct: 1066 NTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQ 1125

Query: 357  GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
              + ++ +L+ ++I+  ++P+  T+ S+I G+C+  KV+ A +    +  HG  P +++Y
Sbjct: 1126 NMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISY 1185

Query: 417  TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
               ++  C+E  +     L   M  K + P  VT   +    CK      A+ +LE +
Sbjct: 1186 GALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL 1243



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 201/445 (45%), Gaps = 16/445 (3%)

Query: 213  YCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
            + +IG ++E + +   M +QG  L     + ++    +   ++ A  +  EM A G+ PD
Sbjct: 771  FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 830

Query: 273  LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
              TY  +I G C+   V +A +   EM  +    ++     I+   CEK ++  A  +F 
Sbjct: 831  SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 890

Query: 333  SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
             +       +++ Y+ MI G  K G++ +A +L  ++++    P++ T  SLI+G CK G
Sbjct: 891  KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 950

Query: 393  KVADARRL-LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
                A RL L  I+    +P+  TYT  ++ YC+E  + R   L + M+ + + P   TY
Sbjct: 951  WTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTY 1010

Query: 452  TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
            T +I G CK     +A +L+E M   G  P+  TYN+I+   CK     +AF+LLN  + 
Sbjct: 1011 TTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQ 1070

Query: 512  HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
            + +E    TY ILI   C   D+  A   L  + +         YTT+I A C +  +  
Sbjct: 1071 NQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKD 1130

Query: 572  AMTFFCQMVEKGFEISIRDYTK---------------SFFCMMLSNGFPPDQEICEVMLI 616
            +   F ++++ G   +   YT                 FF  M  +G  PD      ++ 
Sbjct: 1131 SEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALIS 1190

Query: 617  AFHQGGDLGSVFELAAVMIKSGLLP 641
               +   L    +L   MI  GL P
Sbjct: 1191 GLCKESRLDEARQLYDTMIDKGLSP 1215



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 216/445 (48%), Gaps = 8/445 (1%)

Query: 5    VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPR 61
             +    +V+ AV+   K+ ++ L  ++  Y+S++  L         ++L +++  +    
Sbjct: 875  AFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKP 934

Query: 62   NVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
            NVYT++ +I GLC++   + A  LFL+      + P+V +  A++S YCK      A+ L
Sbjct: 935  NVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEML 994

Query: 121  FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
            F  M + GL P+  +Y  LI G C AG+  +A E    M   G  P+  TY+ +  G   
Sbjct: 995  FERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCK 1054

Query: 181  LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
              +   A+K++        + D VTYT+LI   C+  ++ + L     M   GF+ ++  
Sbjct: 1055 RGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHL 1114

Query: 241  YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
            Y+ L+++ C+   + ++  L  E+  +GL P   TY+ +I G C++ KV  A++ + +M 
Sbjct: 1115 YTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMS 1174

Query: 301  SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
                +P+S ++GA++ GLC++  + EAR  +D++I        V    +   Y K  +  
Sbjct: 1175 DHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFA 1234

Query: 361  EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
             A+ +  +L +K     I T ++LI   C   KVA A      +    +    VT   F 
Sbjct: 1235 SAMVILERLNKKLW---IRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAF- 1290

Query: 421  NAYCEEGNIQRLLALLQEMETKAIG 445
            N  C E N   L++ L E  +K IG
Sbjct: 1291 NTACIESNKYALVSDLSERISKGIG 1315



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 190/393 (48%), Gaps = 21/393 (5%)

Query: 252  GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
            G++ EA+ ++ +M   GL       + +I    +   V  A  +++EM ++ + P+S  +
Sbjct: 775  GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 834

Query: 312  GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
              I++G C    + EA  +   ++    + D     ++I  + +   +  AV  + ++ +
Sbjct: 835  KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 894

Query: 372  KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
              +SP+++ ++S+I G CK G V  A  LL+ +  +G +P+  T+T+ ++  C++G  +R
Sbjct: 895  MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTER 954

Query: 432  LLAL-LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTII 490
               L L+ + +    P   TYT +I G CK+ KL  A  L E M   G+ P+  TY T+I
Sbjct: 955  AFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLI 1014

Query: 491  RSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNIS 550
               CK  +  KA++L+  M      P + TYN ++DGLC  G  + A  LL +  ++ I 
Sbjct: 1015 DGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE 1074

Query: 551  LTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEI 610
               V YT +I   C   D+++A+ F  +M + GF+  I  YT                  
Sbjct: 1075 ADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYT------------------ 1116

Query: 611  CEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDK 643
               ++ AF +   +    +L   +IK GL P K
Sbjct: 1117 --TLIAAFCRQNMMKDSEKLFDEVIKLGLAPTK 1147



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 129/301 (42%), Gaps = 23/301 (7%)

Query: 349  MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
            M+  + ++G + EAV +   +  + +  +    N +I    +   V  A  + D +   G
Sbjct: 767  MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 826

Query: 409  LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
            + P + TY   +  YC  GN+      + EM  +     + T T++I   C++  +  AV
Sbjct: 827  VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 886

Query: 469  QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
                 +  +G++P+ I Y+++I   CK   +++AF+LL +M  +  +P   T+  LI GL
Sbjct: 887  WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 946

Query: 529  CVNGDLKNADCLLVSL-QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
            C  G  + A  L + L +  N       YT +I  +C E  + +A   F +M E+G   +
Sbjct: 947  CKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPN 1006

Query: 588  IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH-QGGDLGSVFELAAVMIKSGLLPDKFLI 646
               YT                      LI  H + G+    +EL  +M   G  P+    
Sbjct: 1007 TNTYT---------------------TLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTY 1045

Query: 647  N 647
            N
Sbjct: 1046 N 1046


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/595 (24%), Positives = 271/595 (45%), Gaps = 14/595 (2%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSL-------------LYNLRHTDIMWDLYDDI 54
           ++  + +A  +I  M++   + +   Y  L             L      D   +L++ +
Sbjct: 22  KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQL 81

Query: 55  KVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFA 114
           + +      Y  + +I G     +  +A   L+    K   PSV++ N I++   K    
Sbjct: 82  EQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRV 141

Query: 115 EVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSIL 174
           E A  +F  M +  + P+  +YNILI  LC  G +  ALE  +DM R G+ P+ +T +I+
Sbjct: 142 EEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIM 200

Query: 175 AKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGF 234
                   ++  A  + + +  K   P+ VT++ LI G  + G V++   L E ML  G 
Sbjct: 201 IDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGH 260

Query: 235 KLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQ 294
               I Y+ L+ S  K GR ++   +  EM   G  PDL   +  +  + K  +  K   
Sbjct: 261 VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRA 320

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           L+ E+ +    P++ ++  ++ GL +  +  E    F ++    C+ D   YN +IDG+ 
Sbjct: 321 LFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFC 380

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K G + +A QL  ++  K   P++VT+ S+I G  K  ++ +A  L +  K +G++ + V
Sbjct: 381 KSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVV 440

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            Y++ ++ + + G I     +++E+  K + P   T+  ++  L K  ++ EA+   + M
Sbjct: 441 VYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSM 500

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
             +   P+QITY+ +I   C+ +   KAF    +M    L+P + TY  +I GL   G++
Sbjct: 501 KDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNI 560

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIR 589
             A  L    + +       +Y  +I+   +      A   F +   KG  I  +
Sbjct: 561 LEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTK 615



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 259/531 (48%), Gaps = 4/531 (0%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHT---DIMWDLYDDIKVS 57
           +  +V  +   + +AV +  ++++         YN+++         D  + L +  K  
Sbjct: 60  LFPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAK 119

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            +  +V   + ++  L ++ R+++A+   +E   ++  P+V + N ++   C+ G    A
Sbjct: 120 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAA 178

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
             +   M + GL P+  + NI+I  LC A  +EEA      M      P+A+T+S L  G
Sbjct: 179 LEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 238

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
                ++  A+ + +K+L  G  P  + YT LI  + + G  E+G K+ + M+  G   +
Sbjct: 239 LGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 298

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYN 297
           +   +  +  + K+G  ++   L  E+ A G  PD  +YSILI GL K    ++  +L+ 
Sbjct: 299 LTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFY 358

Query: 298 EMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLG 357
            M  +    ++ A+ A++ G C+   + +A    + + +      VV Y  +IDG  K+ 
Sbjct: 359 AMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKID 418

Query: 358 NIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYT 417
            + EA  L+ +     I  ++V ++SLI GF K G++ +A  +++ +   GL P+  T+ 
Sbjct: 419 RLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 478

Query: 418 TFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVI 477
             ++A  +   I   L   Q M+     P  +TY+++I GLC+  K  +A    ++M  +
Sbjct: 479 CLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKL 538

Query: 478 GVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           G+ P+ ITY T+I    K  ++ +A  L ++   +   P SA+YN +I+GL
Sbjct: 539 GLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGL 589



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 140/308 (45%), Gaps = 16/308 (5%)

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K   + EAV+L+ QL + R  P    +N++I G+   GK  +A  LL+  K  G  PS +
Sbjct: 67  KANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVI 126

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
            Y   +    ++  ++  L + +EM+  A+ P   TY ++I  LC++ KL  A+++ +DM
Sbjct: 127 AYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDM 185

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G+ P+ +T N +I   CK + L +A  +   M      P + T++ LIDGL   G +
Sbjct: 186 ERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRV 245

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG----------- 583
            +A  L   + +       + YT++I++    G        + +MV  G           
Sbjct: 246 DDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTY 305

Query: 584 ----FEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGL 639
               F+    +  ++ F  + ++GF PD     +++    + G     +EL   M + G 
Sbjct: 306 MDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGC 365

Query: 640 LPDKFLIN 647
           + D    N
Sbjct: 366 VLDTHAYN 373



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 45/219 (20%), Positives = 78/219 (35%), Gaps = 31/219 (14%)

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRS------ 492
           M     GP+      ++    K  KL+EA  +++ M      P    Y  +I        
Sbjct: 1   MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLL 60

Query: 493 ----FCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
                CK   L +A +L  Q+  +   P +  YN +I G    G    A  LL   +   
Sbjct: 61  FPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 120

Query: 549 ISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQ 608
              + +AY  I+     +  V +A+  F +M         RD               P+ 
Sbjct: 121 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMK--------RDAV-------------PNV 159

Query: 609 EICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
               +++    + G L +  E+   M ++GL P+   +N
Sbjct: 160 PTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVN 198


>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 232/446 (52%), Gaps = 4/446 (0%)

Query: 64  YTNSI-VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           YT  + +I  LC + +L+ A+    +   K   P V++ N +++  CK G  E A  L  
Sbjct: 131 YTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVR 190

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLS 182
            ML+ G  P+  ++N  I G C+  ++++AL   + M   G+ P+ +TY+IL        
Sbjct: 191 EMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKG 250

Query: 183 QISGAWKVIQKLL---IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVI 239
            +  A K+++K+L         DI+T T+ + G  + G++ + L   + ML +G +++V+
Sbjct: 251 LLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVV 310

Query: 240 AYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
           AY+VL+   C    ++ A     EM   GL PD+ TY+ LI G CK   + +A  ++  M
Sbjct: 311 AYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVM 370

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
                +P+  ++  I+ GLC    +  A  +   ++ +  + + +++N++IDG+ + G++
Sbjct: 371 SKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDL 430

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
             A+ +  Q++   I P++ T+N+LI+   K G + DA  +   + L+G+ P  VTY   
Sbjct: 431 SNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLL 490

Query: 420 MNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
           + A C  G I   L L  EM  +   P  +TYT +I+G C +  + EA +LL  +   G+
Sbjct: 491 IGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGL 550

Query: 480 TPDQITYNTIIRSFCKCKDLRKAFQL 505
           + D   +  +I+ +C+ +   +A+ L
Sbjct: 551 SIDHAPFQILIQKYCRTRVPGRAYDL 576



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 214/429 (49%), Gaps = 3/429 (0%)

Query: 139 LIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKG 198
           +I  LC+ G +  AL   N M + GV PD +T++ L  G      +  A  +++++L  G
Sbjct: 137 MIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIG 196

Query: 199 SDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEAL 258
             P+  T+   I GYC   NV++ L L   M + G   N + Y++L+ ++CK G + +A 
Sbjct: 197 PSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDAR 256

Query: 259 GLLYEM---EAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
            LL ++   +      D++T +I + G  K+  + +A+  ++EM  +    +  A+  ++
Sbjct: 257 KLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLI 316

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            G C  + +  A  YF  +     + D+  YN +I G+ K+GN+ EA  ++  + +   +
Sbjct: 317 HGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAA 376

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P ++++  +I G C +G V  A + L  +  + + P  + +   ++ +   G++   L++
Sbjct: 377 PDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSI 436

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
             +M +  I P   TY  +I    K   + +A  + ++M + G+ PD +TYN +I + C 
Sbjct: 437 RDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACN 496

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
              +  A +L ++M     EP   TY  LI G C+ G +  A+ LL  LQ   +S+    
Sbjct: 497 FGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAP 556

Query: 556 YTTIIKAHC 564
           +  +I+ +C
Sbjct: 557 FQILIQKYC 565



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 197/395 (49%), Gaps = 3/395 (0%)

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           D      +I   C  G +   L LR  M+ +G   +V+ ++ L++ +CK+G +++A  L+
Sbjct: 130 DYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLV 189

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            EM  +G  P+  T++  I+G C  + V KA+ L++ M +  I PN   +  ++  LC+K
Sbjct: 190 REMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKK 249

Query: 322 EMITEARMYFDSLIMSNC---IQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSI 378
            ++ +AR   + ++  +C     D++   I +DG +K G++ +A+  + +++++     +
Sbjct: 250 GLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDV 309

Query: 379 VTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQE 438
           V +N LI+GFC    +  A R    +   GL P   TY T ++ +C+ GN+     +   
Sbjct: 310 VAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGV 369

Query: 439 METKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
           M      P  ++Y ++I+GLC    +  A Q L  M    + P+ + +N +I    +  D
Sbjct: 370 MSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGD 429

Query: 499 LRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
           L  A  + +QM    + P   TYN LI      G++ +A  +   +  + I    V Y  
Sbjct: 430 LSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNL 489

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK 593
           +I A C  G +H A+  + +M+ +G+E  I  YT+
Sbjct: 490 LIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTE 524



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 194/404 (48%), Gaps = 7/404 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +V T++ +++GLC+   L+ A   ++E       P+  + N  +  YC     + A  LF
Sbjct: 165 DVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLF 224

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE-----FTNDMGRHGVEPDAITYSILAK 176
             M   G+ P+  +YNILIH LC  G +++A +       +D G+     D IT +I   
Sbjct: 225 STMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKE--TSDIITSTIFMD 282

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G      +  A     ++L +G+  D+V Y VLI G+C I ++    +    M  +G   
Sbjct: 283 GCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLP 342

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           ++  Y+ L+S  CK G +DEA  +   M  +G  PDL++Y ++I+GLC    V +A Q  
Sbjct: 343 DIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFL 402

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
             M    + P       ++ G      ++ A    D ++      +V  YN +I   +K 
Sbjct: 403 VCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKG 462

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           GNI +A  + ++++   I P +VT+N LI   C  G++  A RL D +   G EP  +TY
Sbjct: 463 GNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITY 522

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK 460
           T  +  +C  G++     LL +++   +   H  + ++I+  C+
Sbjct: 523 TELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQILIQKYCR 566



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 176/367 (47%), Gaps = 23/367 (6%)

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           +IR LC + K+  A+ L N+M  K + P+   H  ++ GLC+   + +A      ++   
Sbjct: 137 MIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIG 196

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
              +   +N  I GY    N+ +A+ L+  +    I P+ VT+N LI+  CK G + DAR
Sbjct: 197 PSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDAR 256

Query: 399 RLLDTIKLH--GLEPSAV-TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +LL+ I     G E S + T T FM+   ++G++ + L    EM  +      V Y V+I
Sbjct: 257 KLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLI 316

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
            G C    +  A +   +M+  G+ PD  TYNT+I  FCK  +L +A  +   M      
Sbjct: 317 HGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAA 376

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
           P   +Y ++I GLC++GD+  A+  LV + E+ +    + +  +I  H   GD+  A+  
Sbjct: 377 PDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNAL-- 434

Query: 576 FCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMI 635
                      SIRD        M+S G PP+      ++ A  +GG++     +   M+
Sbjct: 435 -----------SIRD-------QMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEML 476

Query: 636 KSGLLPD 642
            +G+ PD
Sbjct: 477 LNGIYPD 483



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 178/369 (48%), Gaps = 8/369 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD-------LYDDIKVSE 58
           Y     V  A+++ + M    +  +  TYN L++ L    ++ D       + DD    E
Sbjct: 211 YCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKE 270

Query: 59  TPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAK 118
           T  ++ T++I +DG  ++  +  A++   E   +     VV+ N ++  +C +     A 
Sbjct: 271 T-SDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAY 329

Query: 119 GLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
             FC M K GL PD F+YN LI G C  G+++EA      M + G  PD I+Y ++ +G 
Sbjct: 330 RYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGL 389

Query: 179 HLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNV 238
            +   +  A + +  +L     P+ + + V+I G+ + G++   L +R+ M+S G   NV
Sbjct: 390 CIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNV 449

Query: 239 IAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             Y+ L+ +  K G I +A  +  EM   G+ PD+VTY++LI   C   ++H A++LY+E
Sbjct: 450 FTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDE 509

Query: 299 MCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           M  +   P+   +  ++ G C +  + EA      L  S    D   + I+I  Y +   
Sbjct: 510 MLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQILIQKYCRTRV 569

Query: 359 IGEAVQLYR 367
            G A  L +
Sbjct: 570 PGRAYDLTK 578


>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Brachypodium distachyon]
          Length = 904

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 243/529 (45%), Gaps = 17/529 (3%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           PS      ++  Y K G    A+  F  M   G+ P+AF +  L+H   +A  M   L  
Sbjct: 267 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSC 326

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
             +M   G+E   +TYSI+  GF  ++    A  + ++   K  D + + Y+ +I  +CQ
Sbjct: 327 VEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQ 386

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
            GN++   +L   M   G    + AY  ++          + L +   ++     P +++
Sbjct: 387 SGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIIS 446

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y  LI    K  KV KAI +  EM S  I  N+  +  ++ G         A   F+ ++
Sbjct: 447 YGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEML 506

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            S    D  +YN++I+ + K+GN+  A+++  ++ ++R+ PS   F  +I GF   G + 
Sbjct: 507 KSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMK 566

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  +LD ++  G  P+ +TY   ++   ++  ++R +++L +M    I P   TYT+++
Sbjct: 567 RALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIM 626

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
           +G      + +A +    +   G+  D   Y T++R+ CK   ++ A  +  +M    + 
Sbjct: 627 RGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIA 686

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTF 575
             +  YNILIDG    GD+  A  L+  ++E  +      YT+ I A C  GD+ +A   
Sbjct: 687 RNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKV 746

Query: 576 FCQMVEKGFEISIRDYT----------------KSFFCMMLSNGFPPDQ 608
             +M + G + +++ YT                KSF  M L+ G  PD+
Sbjct: 747 IEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLA-GLKPDE 794



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/539 (26%), Positives = 242/539 (44%), Gaps = 24/539 (4%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
           ++V+ + I++ + K+  A+ A  LF          +   Y+ +IH  C +G+M+ A E  
Sbjct: 338 TIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELV 397

Query: 157 NDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQI 216
            +M   G++     Y  +  G+ ++        V ++L      P I++Y  LI  Y +I
Sbjct: 398 REMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKI 457

Query: 217 GNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTY 276
           G V + + + + M S G K N   YS+L+S          A  +  EM   GL+PD   Y
Sbjct: 458 GKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIY 517

Query: 277 SILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM 336
           ++LI   CK   + +AI++  +M  +R+ P++ A   I+ G      +  A    D +  
Sbjct: 518 NLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRR 577

Query: 337 SNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVAD 396
           S C   V+ YN +I G +K   +  AV +  ++    I+P+  T+  ++ G+  NG +  
Sbjct: 578 SGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGK 637

Query: 397 ARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIK 456
           A      IK  GL+     Y T + A C+ G +Q  LA+ +EM T+ I      Y ++I 
Sbjct: 638 AFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILID 697

Query: 457 GLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEP 516
           G  ++  + EA  L++ M   GV P+  TY + I + CK  D+++A +++ +M    L+P
Sbjct: 698 GWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKP 757

Query: 517 TSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTK---VAYTTII-----KAHCAEGD 568
              TY  LI G          D  L S +E  ++  K    AY  ++     +A   EG 
Sbjct: 758 NLKTYTTLIKGWA---KASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGS 814

Query: 569 VHKAMTFFC-QMVEKGFEISIR------------DYTKSFFCMMLSNGFPPDQEICEVM 614
            +  +   C +M E    + +R            + T       L   FPPD    EV+
Sbjct: 815 TYTGILSICREMFENDLTVDMRTAVHWSRWLHKIERTGGALTEALQRIFPPDWNSLEVL 873



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 127/526 (24%), Positives = 248/526 (47%), Gaps = 38/526 (7%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN---LRHTDIMWDLYDDIKVSETPRN 62
           Y++ G  H A      M+   ++ +   + SL++     R    +    +++K       
Sbjct: 279 YAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELT 338

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFC 122
           + T SI+I G  + +  Q A    +E   K    + +  + I+  +C+ G  + A+ L  
Sbjct: 339 IVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVR 398

Query: 123 LMLKYGLHPDAFSYNILIHGLCIA-----------------------------------G 147
            M + G+     +Y+ ++HG  I                                    G
Sbjct: 399 EMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIG 458

Query: 148 SMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYT 207
            + +A+  + +M  +G++ +  TYS+L  GF  L   + A+ + +++L  G  PD   Y 
Sbjct: 459 KVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYN 518

Query: 208 VLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAV 267
           +LI  +C++GN++  +++ E M  +  + +  A+  ++     +G +  AL +L  M   
Sbjct: 519 LLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRS 578

Query: 268 GLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEA 327
           G  P ++TY+ LI GL K+++V +A+ + N+M    I+PN   +  I+ G      I +A
Sbjct: 579 GCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKA 638

Query: 328 RMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYG 387
             YF  +       DV +Y  ++    K G +  A+ + R++  ++I+ +   +N LI G
Sbjct: 639 FEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDG 698

Query: 388 FCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           + + G V +A  L+  +K  G+ P+  TYT+++NA C+ G++QR   +++EM    + P 
Sbjct: 699 WARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPN 758

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSF 493
             TYT +IKG  K      A++  E+M + G+ PD+  Y+ ++ S 
Sbjct: 759 LKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSL 804



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 184/401 (45%)

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           W+ +     +   P    + ++I  Y + G+        E M ++G + N   ++ L+ +
Sbjct: 254 WQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHA 313

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
              +  +   L  + EM+A G++  +VTYSI+I G  K +    A  L+ E  +K    N
Sbjct: 314 YAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLN 373

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
              +  I+   C+   +  A      +        +  Y+ M+ GY  + +  + + ++ 
Sbjct: 374 GIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFE 433

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
           +L E   +PSI+++  LI  + K GKV  A  +   ++ +G++ +  TY+  ++ +    
Sbjct: 434 RLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLH 493

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
           +     ++ +EM    + P    Y ++I+  CK   +  A+++LE M    + P    + 
Sbjct: 494 DFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFR 553

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            II  F    D+++A  +L+ M      PT  TYN LI GL     ++ A  +L  +   
Sbjct: 554 PIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIA 613

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
            I+  +  YT I++ + A GD+ KA  +F ++ E G ++ +
Sbjct: 614 GITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDV 654



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/391 (19%), Positives = 171/391 (43%), Gaps = 15/391 (3%)

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           KP    + ++I    K+   H A   +  M ++ I PN+F   +++        +     
Sbjct: 266 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLS 325

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
             + +        +V Y+I+I G+ K+ +   A  L+++   K    + + ++++I+  C
Sbjct: 326 CVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHC 385

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           ++G +  A  L+  ++  G++     Y + M+ Y    + ++ L + + ++     P+ +
Sbjct: 386 QSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSII 445

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
           +Y  +I    K  K+ +A+ + ++M   G+  +  TY+ +I  F    D   AF +  +M
Sbjct: 446 SYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEM 505

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
               L+P  A YN+LI+  C  G++  A  +L  +Q+  +  +  A+  II+     GD+
Sbjct: 506 LKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDM 565

Query: 570 HKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSN---------------GFPPDQEICEVM 614
            +A+     M   G   ++  Y      ++  N               G  P++    ++
Sbjct: 566 KRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTII 625

Query: 615 LIAFHQGGDLGSVFELAAVMIKSGLLPDKFL 645
           +  +   GD+G  FE    + + GL  D ++
Sbjct: 626 MRGYAANGDIGKAFEYFTKIKEGGLKLDVYI 656



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 134/292 (45%), Gaps = 3/292 (1%)

Query: 1   MLAFVYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVS 57
           +L   + + G +  A+ ++ KM++  ++ S + +  ++        M    ++ D ++ S
Sbjct: 519 LLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRS 578

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
                V T + +I GL ++++++ A+  L + +     P+  +   IM  Y   G    A
Sbjct: 579 GCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKA 638

Query: 118 KGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG 177
              F  + + GL  D + Y  L+   C +G M+ AL  T +M    +  +   Y+IL  G
Sbjct: 639 FEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDG 698

Query: 178 FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN 237
           +     +  A  +++++   G  P+I TYT  I   C+ G+++   K+ E M   G K N
Sbjct: 699 WARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPN 758

Query: 238 VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
           +  Y+ L+    K+   D AL    EM+  GLKPD   Y  L+  L  +  V
Sbjct: 759 LKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLLSRATV 810



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 145/312 (46%), Gaps = 33/312 (10%)

Query: 361 EAVQLYRQLIEKRIS--------------PSIVTFNSLIYGFCKNGKVADARRLLDTIKL 406
           EA + +R+++E R                PS   F  +I  + K G    AR   + ++ 
Sbjct: 238 EACREFRRVVESRPEDWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRA 297

Query: 407 HGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQE 466
            G+EP+A  +T+ ++AY    +++ +L+ ++EM+ + I  T VTY+++I G  K    Q 
Sbjct: 298 RGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQS 357

Query: 467 AVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILID 526
           A  L ++        + I Y+ II + C+  ++ +A +L+ +M    ++     Y+ ++ 
Sbjct: 358 ADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMH 417

Query: 527 GLCVNGDLKNADCLLV--SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           G  +  D K   CL+V   L+E   + + ++Y  +I  +   G V KA+    +M   G 
Sbjct: 418 GYTIIQDEKK--CLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGI 475

Query: 585 E-------------ISIRDYTKSF--FCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFE 629
           +             I + D+  +F  F  ML +G  PD+ I  +++ AF + G++     
Sbjct: 476 KHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIR 535

Query: 630 LAAVMIKSGLLP 641
           +   M K  + P
Sbjct: 536 ILEKMQKERMQP 547



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 3/218 (1%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN-LRHTDI--MWDLYDDIKVSETPRNVY 64
           +   V  AV V+ KM    +  +  TY  ++     + DI   ++ +  IK      +VY
Sbjct: 596 KKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVY 655

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
               ++   C+  R+Q A+   +E + ++   +    N ++  + + G    A  L   M
Sbjct: 656 IYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQM 715

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G+ P+  +Y   I+  C AG M+ A +   +M   G++P+  TY+ L KG+   S  
Sbjct: 716 KEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLP 775

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
             A K  +++ + G  PD   Y  L+        V EG
Sbjct: 776 DRALKSFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEG 813


>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 218/431 (50%), Gaps = 16/431 (3%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M   G++ D I  SIL   F+ L Q++ A+ V+ K+L  G  PD VT T L+ G C    
Sbjct: 1   MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60

Query: 219 VEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSI 278
           V++ L   + ++++GF+L+ ++Y  L++ +CKSG          E +A    PD   YS+
Sbjct: 61  VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSG----------ETKA----PDQFMYSM 106

Query: 279 LIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSN 338
           +I  LCK   V  A  LY EM  KRI P+   +  ++ G C    + +A   F+ + + N
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADAR 398
            + +V  +NI+IDG  K G++     +   +I++ + P +VT +SLI G+    K   AR
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKAR 226

Query: 399 RLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGL 458
            + + +  +G+     +Y   +N   +   +   + L +EM+ K++ P  +TY+ +I GL
Sbjct: 227 YIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGL 286

Query: 459 CKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTS 518
            K  ++     L+++M   G + + ITY++++   CK      A ++  ++     EP  
Sbjct: 287 GKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNM 346

Query: 519 ATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQ 578
            TYNIL+DGLC NG LK+A  +   L      L    YT +I   C E    +A  + C 
Sbjct: 347 VTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEA--YGCT 404

Query: 579 MVEKGFEISIR 589
                +EI IR
Sbjct: 405 PNAVTYEIIIR 415



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 203/420 (48%), Gaps = 30/420 (7%)

Query: 97  SVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFT 156
            +++L+ +++ +  L     A  +   +LK G  PD  +   L+ GLCI   +++AL F 
Sbjct: 9   DIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKALHFH 68

Query: 157 NDMGRHGVEPDAITYSILAKGF-----------HLLSQISG----------AWKVIQKLL 195
           +D+   G   D ++Y  L  G             + S I            A+ +  +++
Sbjct: 69  DDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDLYCEMV 128

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
           +K   PD+VTY  LI G+C +G +E+ ++L   M  +    NV ++++L+  +CK G + 
Sbjct: 129 VKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVK 188

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
               +L  M    +KPD+VT S LI G     K +KA  ++N M    ++ +  ++  ++
Sbjct: 189 GGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMI 248

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
            GL + +M+ EA + F  +   +   D + Y+ +IDG  KLG I     L  ++     S
Sbjct: 249 NGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRS 308

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
            +++T++SL+   CK+G    A R+   IK  G EP+ VTY   ++  C+ G ++    +
Sbjct: 309 ANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEI 368

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
             ++  K        YTV+I GLC++    EA          G TP+ +TY  IIR+  K
Sbjct: 369 FHDLLIKGYRLDVRLYTVMINGLCREALFDEAY---------GCTPNAVTYEIIIRALFK 419



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 205/439 (46%), Gaps = 58/439 (13%)

Query: 128 GLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
           G+  D  + +ILI+       +  A      + + G +PD +T + L KG  + +++  A
Sbjct: 5   GIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKA 64

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
                 ++ KG   D V+Y  LI G C+ G  +                +   YS++++ 
Sbjct: 65  LHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAP--------------DQFMYSMIINR 110

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           +CK   + +A  L  EM    + PD+VTY+ LI G C   ++  AI+L+NEM  K I PN
Sbjct: 111 LCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPN 170

Query: 308 SFAHGAILLGLCEK--------------------EMIT---------------EARMYFD 332
             +   ++ GLC++                    +++T               +AR  F+
Sbjct: 171 VCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFN 230

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
           ++  +    D+  YNIMI+G  K   + EAV L++++  K ++P  +T+++LI G  K G
Sbjct: 231 AMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLG 290

Query: 393 KVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYT 452
           +++    L+D ++  G   + +TY++ +N  C+ G+    + +  +++ K   P  VTY 
Sbjct: 291 RISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYN 350

Query: 453 VVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLH 512
           +++ GLCK  +L++A ++  D+ + G   D   Y  +I   C+     +A+         
Sbjct: 351 ILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEAY--------- 401

Query: 513 NLEPTSATYNILIDGLCVN 531
              P + TY I+I  L  N
Sbjct: 402 GCTPNAVTYEIIIRALFKN 420



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 203/410 (49%), Gaps = 24/410 (5%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K+   P  V T + ++ GLC  + ++ A+ F  +   K F    VS   +++  CK G 
Sbjct: 37  LKIGYQPDTV-TLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGE 95

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
            +               PD F Y+++I+ LC    + +A +   +M    + PD +TY+ 
Sbjct: 96  TKA--------------PDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNT 141

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L  GF ++ Q+  A ++  ++ +K   P++ ++ +LI G C+ G+V+ G  +  VM+ Q 
Sbjct: 142 LIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQS 201

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            K +V+  S L+       + ++A  +   M   G+  DL +Y+I+I GL K   V +A+
Sbjct: 202 VKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAV 261

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            L+ EM  K ++P++  +  ++ GL +   I+      D +  +    +V+ Y+ +++  
Sbjct: 262 ILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVL 321

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K G+   A++++ ++ +K   P++VT+N L+ G CKNG++ DA+ +   + + G     
Sbjct: 322 CKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDV 381

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
             YT  +N  C E       AL    E     P  VTY ++I+ L K  K
Sbjct: 382 RLYTVMINGLCRE-------ALFD--EAYGCTPNAVTYEIIIRALFKNDK 422



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 154/308 (50%), Gaps = 9/308 (2%)

Query: 48  WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           +DLY ++ V     +V T + +I G C   +L+DAI    E   K   P+V S N ++  
Sbjct: 121 YDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDG 180

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
            CK G  +  K +  +M+K  + PD  + + LI G  +     +A    N M ++GV  D
Sbjct: 181 LCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTID 240

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
             +Y+I+  G      +  A  + +++  K   PD +TY+ LI G  ++G +     L +
Sbjct: 241 LRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLID 300

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M + G   NVI YS LL+ +CKSG  D A+ +  +++  G +P++VTY+IL+ GLCK  
Sbjct: 301 EMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNG 360

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           ++  A ++++++  K    +   +  ++ GLC + +  EA           C  + V Y 
Sbjct: 361 RLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEA---------YGCTPNAVTYE 411

Query: 348 IMIDGYVK 355
           I+I    K
Sbjct: 412 IIIRALFK 419



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 148/364 (40%), Gaps = 49/364 (13%)

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           ME  G++ D++  SILI       +++ A  +  ++      P++     +L GLC    
Sbjct: 1   MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           + +A  + D +I      D V Y  +I+G  K G      Q    +I  R+         
Sbjct: 61  VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRL--------- 111

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
                CK+  V DA  L   + +  + P  VTY T +  +C  G ++  + L  EM  K 
Sbjct: 112 -----CKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT------------------ 485
           I P   ++ ++I GLCK+  ++    +L  M    V PD +T                  
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKAR 226

Query: 486 -----------------YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
                            YN +I    K K + +A  L  +M   ++ P + TY+ LIDGL
Sbjct: 227 YIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGL 286

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISI 588
              G +     L+  ++    S   + Y++++   C  G    A+  F ++ +KGFE ++
Sbjct: 287 GKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNM 346

Query: 589 RDYT 592
             Y 
Sbjct: 347 VTYN 350



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 12/175 (6%)

Query: 7   SRTGMVHDAVFVIAKMKELDLKVSIQTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNV 63
           S+  MV +AV +  +M+   +     TY++L   L  L     +WDL D+++ +    NV
Sbjct: 252 SKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANV 311

Query: 64  YTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCL 123
            T S +++ LC+      AI    +   K F P++V+ N ++   CK G  + A+ +F  
Sbjct: 312 ITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHD 371

Query: 124 MLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGF 178
           +L  G   D   Y ++I+GLC     +EA         +G  P+A+TY I+ +  
Sbjct: 372 LLIKGYRLDVRLYTVMINGLCREALFDEA---------YGCTPNAVTYEIIIRAL 417


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 210/419 (50%), Gaps = 1/419 (0%)

Query: 164 VEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGL 223
           V+P+A TY+ L        Q+  A  V+  +L +G  PD+VTY +L+   C+     + +
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 224 KLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGL 283
           +L ++M ++G   N + Y+VL+  MC  G +D+AL LL  + + G KP  V Y+ +++GL
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           C  ++   A +L  EM  +   PN      ++  LC K ++ +A    + +    C  ++
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
           V YN +I+G  +  N+  A+ L  ++      P IVT+N+L+ G C   +  DA  L+D 
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           +  +G  P  VT+ T +   C++G +   + + ++M  K   P  +TY+ +I GL K  K
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302

Query: 464 LQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNI 523
           L +A++L  +M   G  PD+I Y  +         + +A Q + ++    + P +  YN 
Sbjct: 303 LDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 361

Query: 524 LIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           ++ GLC NG  + A  ++  +         + Y  +I+    EG +++A     ++  +
Sbjct: 362 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSR 420



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 208/421 (49%), Gaps = 1/421 (0%)

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           + P+A++YN LIH LC  G + +AL   +DM   G  PD +TY+IL +          A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
           ++I  +  +G  P+ VTY VL+ G C  G+V++ L+L   + S G K + + Y+ +L  +
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 249 CKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNS 308
           C + R  +A  L+ EM      P+  T++++I  LC++  + +AIQL  +M     + N 
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 309 FAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQ 368
             + AI+ GLCE+  +  A      +    C  D+V YN ++ G        +A +L   
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 369 LIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
           + +    P  VTFN+LI   C+ G + DA  +   +   G  P+++TY+T ++   +   
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302

Query: 429 IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNT 488
           + + L L  EM  K   P  + Y ++ + L     ++EA+Q +  +   G++P  + YN 
Sbjct: 303 LDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 361

Query: 489 IIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHN 548
           I+   C+      A  ++  M      P   TY ILI+GL   G L  A  LL+ L   +
Sbjct: 362 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRD 421

Query: 549 I 549
           +
Sbjct: 422 V 422



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 221/431 (51%), Gaps = 6/431 (1%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           N YT + +I  LC++ +++DA+  L +   +   P VV+ N ++   CK      A  L 
Sbjct: 6   NAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELI 65

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
            LM   G  P+  +YN+L+ G+C  G +++ALE   ++  HG +P  + Y+ + KG    
Sbjct: 66  DLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSA 125

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
            +   A +++ ++L +   P+  T+ V+I   C+ G +++ ++L E M   G   N++ Y
Sbjct: 126 ERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTY 185

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + +++ +C+   +D A+GLL +M++ G KPD+VTY+ L++GLC   +   A +L + M  
Sbjct: 186 NAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQ 245

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
               P++     ++  LC+K ++ +A   F  +    C  + + Y+ +I G  K   + +
Sbjct: 246 NGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQ 305

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMN 421
           A++L+ ++  K  +P  + +  L      +  + +A + +  ++  G+ P  V Y   + 
Sbjct: 306 ALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILL 364

Query: 422 AYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTP 481
             C  G  +  + ++  M +    P  +TY ++I+GL  +  L EA +LL     I +  
Sbjct: 365 GLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL-----IKLCS 419

Query: 482 DQITYNTIIRS 492
             +  N++I+S
Sbjct: 420 RDVLVNSLIKS 430



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 200/411 (48%), Gaps = 1/411 (0%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P+  + N ++   C+ G    A  +   ML  G  PD  +YNIL+   C      +A+E 
Sbjct: 5   PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
            + M   G  P+ +TY++L  G      +  A ++++ L   G  P  V Y  ++ G C 
Sbjct: 65  IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124

Query: 216 IGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVT 275
                +  +L   ML +    N   ++V++ S+C+ G + +A+ LL +M   G   ++VT
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 184

Query: 276 YSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLI 335
           Y+ +I GLC+Q  V  A+ L ++M S    P+   +  +L GLC      +A    D++ 
Sbjct: 185 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMT 244

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
            + C+ D V +N +I    + G + +A+++++Q+ +K  +P+ +T++++I G  K  K+ 
Sbjct: 245 QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 304

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L + +   G  P  + Y        ++  I+  +  +++++   I P  V Y  ++
Sbjct: 305 QALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAIL 363

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
            GLC+  K + A+ ++  M   G  PD +TY  +I        L +A +LL
Sbjct: 364 LGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 414



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 182/391 (46%), Gaps = 16/391 (4%)

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           ++P+  TY+ LI  LC++ +V  A+ + ++M  +  +P+   +  +L   C+     +A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
              D +    C  + V YN+++DG    G++ +A++L R L      PS V +N+++ G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTH 448
           C   +  DA  L+  +      P+  T+   + + C +G +Q+ + LL++M         
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 449 VTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQ 508
           VTY  +I GLC+Q  +  A+ LL  M   G  PD +TYNT+++  C       A +L++ 
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 509 MWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           M  +   P + T+N LI  LC  G + +A  +   + +   +   + Y+TII        
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302

Query: 569 VHKAMTFFCQMVEKGF---------------EISIRDYTKSFFCMMLSNGFPPDQEICEV 613
           + +A+  F +M  KGF               + +I +  ++    +  +G  P   +   
Sbjct: 303 LDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVR-KLQDSGISPHTVLYNA 361

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
           +L+   + G      ++ A M+ SG +PD  
Sbjct: 362 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDL 392



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 200/439 (45%), Gaps = 41/439 (9%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSE-TPRNVYT 65
           G V DA+ V+  M        + TYN LL      R      +L D ++    TP NV T
Sbjct: 21  GQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNV-T 79

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            ++++DG+C +  + DA+  L+        PS V+ N ++   C       A  L   ML
Sbjct: 80  YNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEML 139

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           +    P+  ++N++I+ LC  G +++A++    M +HG   + +TY+ +  G      + 
Sbjct: 140 RENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVD 199

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
           GA  ++ K+   G  PDIVTY  L+ G C      +  +L + M   G   + + ++ L+
Sbjct: 200 GAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLI 259

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
             +C+ G + +A+ +  +M   G  P+ +TYS +I GL K  K+ +A++L+NEM  K  +
Sbjct: 260 GFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFN 319

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
           P+                           +++ C+ D                I EA+Q 
Sbjct: 320 PDKIYQ-----------------------LLAECLNDD-------------DTIEEAIQT 343

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
            R+L +  ISP  V +N+++ G C+NGK   A  ++  +   G  P  +TY   +     
Sbjct: 344 VRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAY 403

Query: 426 EGNIQRLLALLQEMETKAI 444
           EG +     LL ++ ++ +
Sbjct: 404 EGYLNEARELLIKLCSRDV 422



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 161/344 (46%), Gaps = 37/344 (10%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTN 66
           G V DA+ ++  +     K S   YN++L  L   +   D   L  ++     P N  T 
Sbjct: 91  GDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATF 150

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           ++VI  LC++  LQ AI  L++ +      ++V+ NAI++  C+    + A GL   M  
Sbjct: 151 NVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKS 210

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
           YG  PD  +YN L+ GLC A    +A E  ++M ++G  PD +T++ L         +  
Sbjct: 211 YGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVD 270

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLN--------- 237
           A +V +++  KG  P+ +TY+ +I G  +   +++ L+L   M  +GF  +         
Sbjct: 271 AIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAEC 330

Query: 238 -------------------------VIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
                                     + Y+ +L  +C++G+ + A+ ++  M + G  PD
Sbjct: 331 LNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPD 390

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
            +TY ILI GL  +  +++A +L  ++CS+ +  NS      LL
Sbjct: 391 DLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIKSEALL 434


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 195/379 (51%)

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  LF  +L+    P A  +N ++  L  +      L  +  M   G++P+ +  +IL  
Sbjct: 71  AVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILIN 130

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
            F  L  I  A+ V  K+L  G +P+ +T+T LI G C  G + + L   + +++ GF+ 
Sbjct: 131 CFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQF 190

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N I+Y  L+  +CK G    AL LL  ++   ++P++V YS +I G+CK   V+ A  LY
Sbjct: 191 NQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLY 250

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           +EM SK ISPN   + A++ G      + +A   F+ +I  N   DV  +NI++D + K 
Sbjct: 251 SEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKS 310

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G I  A++L  ++ ++   P+IVT++S++   CK  +V  A  LL  +K  G+ P+  TY
Sbjct: 311 GKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTY 370

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           T  ++  C  G ++    + +++  K    T VTY V+  G CK+    EA  LL  M  
Sbjct: 371 TILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEE 430

Query: 477 IGVTPDQITYNTIIRSFCK 495
            G  PD  TY  I  S  K
Sbjct: 431 NGCIPDAKTYELIKLSLFK 449



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 206/382 (53%), Gaps = 12/382 (3%)

Query: 149 MEEALEFTNDMGRHGVEPDAITYS------ILAKGFHLLSQISGAWKVIQKLLIKGSDPD 202
           +++A+   N + R    P AI ++      + +K +H +  +S      +K+  +G  P+
Sbjct: 68  VDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS------KKMEFRGIKPN 121

Query: 203 IVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLY 262
           +V   +LI  +CQ+G +     +   +L  G+  N I ++ L+  +C  G+I +AL    
Sbjct: 122 LVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHD 181

Query: 263 EMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKE 322
           ++ A+G + + ++Y  LI GLCK  +   A+ L   +  K + PN   +  I+ G+C+ +
Sbjct: 182 KLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDK 241

Query: 323 MITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFN 382
            + +A   +  ++      +VV Y+ +I G+  +G + +AV L+ ++I + I P + TFN
Sbjct: 242 HVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFN 301

Query: 383 SLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETK 442
            L+  FCK+GK++ A +L+D +   G  P+ VTY++ ++A C+   + + +ALL +++ +
Sbjct: 302 ILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQ 361

Query: 443 AIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKA 502
            I P   TYT++I GLC   KL++A  + ED+ V G     +TY  +   FCK     +A
Sbjct: 362 GIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEA 421

Query: 503 FQLLNQMWLHNLEPTSATYNIL 524
             LL++M  +   P + TY ++
Sbjct: 422 SALLSKMEENGCIPDAKTYELI 443



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 196/382 (51%), Gaps = 6/382 (1%)

Query: 169 ITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREV 228
           I YS  +  FH  + +  A  +   LL +   P  + +  ++    +  +    L L + 
Sbjct: 53  IPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKK 112

Query: 229 MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDK 288
           M  +G K N++  ++L++  C+ G I  A  +  ++  +G  P+ +T++ LI+GLC + +
Sbjct: 113 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQ 172

Query: 289 VHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL--IMSNCIQ-DVVL 345
           +H+A+  ++++ +     N  ++G ++ GLC+   + E R   D L  +    +Q +VV+
Sbjct: 173 IHQALNFHDKLVALGFQFNQISYGTLIDGLCK---VGETRAALDLLRRVDGKLVQPNVVM 229

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIK 405
           Y+ +IDG  K  ++ +A  LY +++ K ISP++VT+++LI GF   GK+ DA  L + + 
Sbjct: 230 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMI 289

Query: 406 LHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQ 465
              ++P   T+   ++ +C+ G I   L L+ EM  +   P  VTY+ ++  LCK  ++ 
Sbjct: 290 SENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVD 349

Query: 466 EAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILI 525
           +AV LL  +   G+ P+  TY  +I   C    L  A  +   + +   + T  TY ++ 
Sbjct: 350 KAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMF 409

Query: 526 DGLCVNGDLKNADCLLVSLQEH 547
            G C  G    A  LL  ++E+
Sbjct: 410 YGFCKKGLFDEASALLSKMEEN 431



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 194/382 (50%)

Query: 202 DIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLL 261
           +++ Y+     +    +V++ + L   +L Q      I ++ +L S+ KS      L L 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 262 YEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEK 321
            +ME  G+KP+LV  +ILI   C+   +  A  ++ ++     +PN+     ++ GLC K
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 322 EMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTF 381
             I +A  + D L+      + + Y  +IDG  K+G    A+ L R++  K + P++V +
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 382 NSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMET 441
           +++I G CK+  V DA  L   +   G+ P+ VTY+  ++ +   G ++  + L  +M +
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 442 KAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRK 501
           + I P   T+ +++   CK  K+  A++L+++M+  G  P+ +TY++I+ + CK   + K
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDK 350

Query: 502 AFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIK 561
           A  LL ++    + P   TY ILIDGLC +G L++A  +   L      +T V Y  +  
Sbjct: 351 AVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFY 410

Query: 562 AHCAEGDVHKAMTFFCQMVEKG 583
             C +G   +A     +M E G
Sbjct: 411 GFCKKGLFDEASALLSKMEENG 432



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 192/364 (52%), Gaps = 3/364 (0%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL-QETAGKEFGPSVVSLNAIMSRYCKLG 112
           ++ + TP  +  N I+  G   +S+    +L+L ++   +   P++V+ N +++ +C+LG
Sbjct: 79  LRQNPTPPAIEFNKIL--GSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLG 136

Query: 113 FAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYS 172
               A  +F  +LK G +P+  ++  LI GLC+ G + +AL F + +   G + + I+Y 
Sbjct: 137 LIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYG 196

Query: 173 ILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQ 232
            L  G   + +   A  +++++  K   P++V Y+ +I G C+  +V +   L   M+S+
Sbjct: 197 TLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSK 256

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           G   NV+ YS L+S     G++ +A+ L  +M +  +KPD+ T++IL+   CK  K+  A
Sbjct: 257 GISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYA 316

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
           ++L +EM  +   PN   + +IL  LC+   + +A      L       ++  Y I+IDG
Sbjct: 317 LKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDG 376

Query: 353 YVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPS 412
               G + +A  ++  L+ K    ++VT+  + YGFCK G   +A  LL  ++ +G  P 
Sbjct: 377 LCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPD 436

Query: 413 AVTY 416
           A TY
Sbjct: 437 AKTY 440



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 160/315 (50%), Gaps = 1/315 (0%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K+   P N  T + +I GLC + ++  A+ F  +     F  + +S   ++   CK+G 
Sbjct: 149 LKMGYNP-NTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGE 207

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
              A  L   +    + P+   Y+ +I G+C    + +A +  ++M   G+ P+ +TYS 
Sbjct: 208 TRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSA 267

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
           L  GF  + ++  A  +  K++ +   PD+ T+ +L+  +C+ G +   LKL + M  +G
Sbjct: 268 LISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRG 327

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
              N++ YS +L ++CK+ R+D+A+ LL +++  G++P++ TY+ILI GLC   K+  A 
Sbjct: 328 QPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDAR 387

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
            ++ ++  K        +  +  G C+K +  EA      +  + CI D   Y ++    
Sbjct: 388 NIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSL 447

Query: 354 VKLGNIGEAVQLYRQ 368
            K G    A +L+R+
Sbjct: 448 FKKGENDMAEKLHRE 462



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 146/292 (50%), Gaps = 3/292 (1%)

Query: 10  GMVHDAVFVIAKMKELDLKVSIQTYNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           G +H A+    K+  L  + +  +Y +L+  L     T    DL   +       NV   
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           S +IDG+C+   + DA     E   K   P+VV+ +A++S +  +G  + A  LF  M+ 
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
             + PD +++NIL+   C +G +  AL+  ++M   G  P+ +TYS +        ++  
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDK 350

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
           A  ++ KL  +G  P++ TYT+LI G C  G +E+   + E +L +G+ + V+ Y V+  
Sbjct: 351 AVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFY 410

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNE 298
             CK G  DEA  LL +ME  G  PD  TY ++   L K+ +   A +L+ E
Sbjct: 411 GFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRE 462



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 113/236 (47%)

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
            ++ +AV L+  L+ +  +P  + FN ++    K+        L   ++  G++P+ V  
Sbjct: 66  NDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNC 125

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
              +N +C+ G I    ++  ++      P  +T+T +IKGLC + ++ +A+   + +  
Sbjct: 126 NILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVA 185

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
           +G   +QI+Y T+I   CK  + R A  LL ++    ++P    Y+ +IDG+C +  + +
Sbjct: 186 LGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVND 245

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT 592
           A  L   +    IS   V Y+ +I      G +  A+  F +M+ +  +  +  + 
Sbjct: 246 AFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFN 301


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 248/522 (47%), Gaps = 54/522 (10%)

Query: 73  LCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPD 132
           LC   + + A   ++E  G+ F P   + + ++   C     E+A  LF  M + GL  D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 133 AFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQ 192
            ++Y I++   C AG +E+A ++ N+M   G  P+ +TY+ L   +    ++S A ++ +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 193 KLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVML-----------------SQGFK 235
            +L +G  P+IVTY+ LI G+C+ G +E+  ++ E M                      +
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSER 637

Query: 236 LNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQL 295
            NV+ Y  LL   CK  R++EA  LL  M   G +P+ + Y  LI GLCK  K+ +A ++
Sbjct: 638 PNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 697

Query: 296 YNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVK 355
             EM         + + +++    + +    A      ++ ++C  +VV+Y  MIDG  K
Sbjct: 698 KAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 757

Query: 356 LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVT 415
           +G   EA +L + + EK   P++VT+ ++I GF + GK+     LL+ +   G+ P+ VT
Sbjct: 758 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVT 817

Query: 416 YTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT-YTVVIKGLCKQW------------ 462
           Y   ++  C+ G +     LL+EM+ +   PTH   Y  VI+G  K++            
Sbjct: 818 YRVLIDHCCKNGALDVAHNLLEEMK-QTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQ 876

Query: 463 ---------------------KLQEAVQLLEDMYVIGVT--PDQITYNTIIRSFCKCKDL 499
                                +L+ A++LLE++     T      TYN++I S C    +
Sbjct: 877 DDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKV 936

Query: 500 RKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLL 541
            KAF+L ++M    + P   T+  LI GL  N  +  A  LL
Sbjct: 937 DKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 162/660 (24%), Positives = 276/660 (41%), Gaps = 78/660 (11%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y R+G    A+  + ++K+   + S  TYN L+      D +         S   R +  
Sbjct: 210 YCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCL------DSASLVHREMSL 263

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            ++ +DG                           +L       CK+G    A     LM 
Sbjct: 264 ANLRMDGF--------------------------TLRCYAYSLCKVGKWREA---LTLME 294

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
                PD   Y  LI GLC A   EEA++F N M      P+ +TYS L  G     Q+ 
Sbjct: 295 TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLG 354

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
              +V+  ++++G  P    +  L+  YC  G+     KL + M+  G     + Y++L+
Sbjct: 355 RCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILI 414

Query: 246 SSMCKSGR------IDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEM 299
            S+C          ++ A     EM A G+  + +  S   R LC   K  KA  +  EM
Sbjct: 415 GSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREM 474

Query: 300 CSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNI 359
             +   P++  +  +L  LC    +  A + F+ +     + DV  Y IM+D + K G I
Sbjct: 475 IGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLI 534

Query: 360 GEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTF 419
            +A + + ++ E   +P++VT+ +LI+ + K  KV+ A  L +T+   G  P+ VTY+  
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSAL 594

Query: 420 MNAYCEEGNIQRLLALLQEM-----------------ETKAIGPTHVTYTVVIKGLCKQW 462
           ++ +C+ G +++   + + M                 +  +  P  V Y  ++ G CK  
Sbjct: 595 IDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLH 654

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           +++EA +LL+ M + G  P+QI Y+ +I   CK   L +A ++  +M  H    T  TY+
Sbjct: 655 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYS 714

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
            LID          A  +L  + E++ +   V YT +I   C  G   +A      M EK
Sbjct: 715 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 774

Query: 583 GFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           G + ++  YT                     M+  F + G + +  EL   M   G+ P+
Sbjct: 775 GCQPNVVTYT--------------------AMIDGFGRIGKIETCLELLERMGSKGVAPN 814



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 163/628 (25%), Positives = 266/628 (42%), Gaps = 93/628 (14%)

Query: 49  DLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRY 108
           D  + ++ +    NV T S ++ G   + +L      L     +   PS    N+++  Y
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382

Query: 109 CKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHG-------------------------- 142
           C  G    A  L   M+K G  P    YNILI                            
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLAT 442

Query: 143 ---------------LCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGA 187
                          LC AG  E+A     +M   G  PD  TYS +       S++  A
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELA 502

Query: 188 WKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSS 247
           + + +++   G   D+ TYT+++  +C+ G +E+  K    M   G   NV+ Y+ L+ +
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562

Query: 248 MCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC-SKRIS- 305
             K+ ++  A  L   M + G  P++VTYS LI G CK  ++ KA Q++  MC SK +  
Sbjct: 563 YLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPD 622

Query: 306 ---------------PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMI 350
                          PN   +GA+L G C+   + EAR   D++ M  C  + ++Y+ +I
Sbjct: 623 VDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALI 682

Query: 351 DGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLE 410
           DG  K+G + EA ++  ++ E     ++ T++SLI  + K  +   A ++L  +  +   
Sbjct: 683 DGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 742

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQL 470
           P+ V YT  ++  C+ G       L+Q ME K   P  VTYT +I G  +  K++  ++L
Sbjct: 743 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLEL 802

Query: 471 LEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM----W---------------- 510
           LE M   GV P+ +TY  +I   CK   L  A  LL +M    W                
Sbjct: 803 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNK 862

Query: 511 -------------LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA-- 555
                          +  P  + Y +L+D L     L+ A  LL  +   + +L   +  
Sbjct: 863 EFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSST 922

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKG 583
           Y ++I++ C    V KA   F +M +KG
Sbjct: 923 YNSLIESLCLANKVDKAFRLFSEMSKKG 950



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 212/455 (46%), Gaps = 28/455 (6%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYN-LRHTDIMW--DLYDDIKVSETPRN 62
           + + G++  A     +M+E+    ++ TY +L++  L+   + +  +L++ +       N
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 63  VYTNSIVIDGLCQQSRLQDAILFLQETAG-----------KEFG------PSVVSLNAIM 105
           + T S +IDG C+  +++ A    +   G           K++       P+VV   A++
Sbjct: 588 IVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALL 647

Query: 106 SRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVE 165
             +CKL   E A+ L   M   G  P+   Y+ LI GLC  G ++EA E   +M  HG  
Sbjct: 648 DGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFP 707

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKL 225
               TYS L   +  + +   A KV+ K+L     P++V YT +I G C++G  +E  KL
Sbjct: 708 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 767

Query: 226 REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCK 285
            ++M  +G + NV+ Y+ ++    + G+I+  L LL  M + G+ P+ VTY +LI   CK
Sbjct: 768 MQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 827

Query: 286 QDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVL 345
              +  A  L  EM       ++  +  ++ G   KE I E+    D +   +    + L
Sbjct: 828 NGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF-NKEFI-ESLGLLDEIGQDDTAPFLSL 885

Query: 346 YNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIV----TFNSLIYGFCKNGKVADARRLL 401
           Y +++D  +K   +  A++L  ++     S ++V    T+NSLI   C   KV  A RL 
Sbjct: 886 YRLLVDNLIKAQRLEMALRLLEEV--ATFSATLVDYSSTYNSLIESLCLANKVDKAFRLF 943

Query: 402 DTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALL 436
             +   G+ P   T+ + +        I   L LL
Sbjct: 944 SEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 129/579 (22%), Positives = 228/579 (39%), Gaps = 76/579 (13%)

Query: 137 NILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLI 196
           N+L+   C +GS   ALE    +      P   TY+ L + F     +  A  V +++ +
Sbjct: 204 NVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL 263

Query: 197 KGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDE 256
                D  T        C++G   E L L E   ++ F  + + Y+ L+S +C++   +E
Sbjct: 264 ANLRMDGFTLRCYAYSLCKVGKWREALTLME---TENFVPDTVFYTKLISGLCEASLFEE 320

Query: 257 ALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILL 316
           A+  L  M A    P++VTYS L+ G   + ++ +  ++ N M  +   P+     +++ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 317 GLCE-----------KEMI----TEARMYFDSLIMSNC---------------------- 339
             C            K+M+    T   + ++ LI S C                      
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEML 440

Query: 340 IQDVVLYNIMIDGYVK----LGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
              VVL  I +  + +     G   +A  + R++I +   P   T++ ++   C   K+ 
Sbjct: 441 ATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKME 500

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
            A  L + +K  GL     TYT  ++++C+ G I++      EM      P  VTYT +I
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW----- 510
               K  K+  A +L E M   G  P+ +TY+ +I   CK   + KA Q+  +M      
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDV 620

Query: 511 ------------LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTT 558
                        ++  P    Y  L+DG C    ++ A  LL ++        ++ Y  
Sbjct: 621 PDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDA 680

Query: 559 IIKAHCAEGDVHKAMTFFCQMVEKGFEISI---------------RDYTKSFFCMMLSNG 603
           +I   C  G + +A     +M E GF  ++               +D        ML N 
Sbjct: 681 LIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 740

Query: 604 FPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
             P+  I   M+    + G     ++L  +M + G  P+
Sbjct: 741 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 779



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 140/299 (46%), Gaps = 35/299 (11%)

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +IDGLC+  +L +A     E +   F  ++ + ++++ RY K+   ++A  +   ML+  
Sbjct: 681 LIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 740

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
             P+   Y  +I GLC  G  +EA +    M   G +P+ +TY+ +  GF  + +I    
Sbjct: 741 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCL 800

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM--------------LSQGF 234
           ++++++  KG  P+ VTY VLI   C+ G ++    L E M              + +GF
Sbjct: 801 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF 860

Query: 235 KLNVIA-------------------YSVLLSSMCKSGRIDEALGLLYEME--AVGLKPDL 273
               I                    Y +L+ ++ K+ R++ AL LL E+   +  L    
Sbjct: 861 NKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYS 920

Query: 274 VTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
            TY+ LI  LC  +KV KA +L++EM  K + P      +++ GL     I+EA +  D
Sbjct: 921 STYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLD 979



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 104/281 (37%), Gaps = 26/281 (9%)

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           RQ+  K  SP    +N+L+    ++        LL  I+    E         +  YC  
Sbjct: 157 RQIGYKHTSP---VYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRS 213

Query: 427 GNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITY 486
           G+    L  L  ++     P+  TY  +I+   K   L  A  +  +M +  +  D  T 
Sbjct: 214 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTL 273

Query: 487 NTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQE 546
                S CK    R+A  L   M   N  P +  Y  LI GLC     + A   L  ++ 
Sbjct: 274 RCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA 330

Query: 547 HNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPP 606
            +     V Y+T++   C  G ++K     C+ V                 MM+  G  P
Sbjct: 331 TSCLPNVVTYSTLL---C--GCLNKKQLGRCKRV---------------LNMMMMEGCYP 370

Query: 607 DQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 647
             +I   ++ A+   GD    ++L   M+K G  P   + N
Sbjct: 371 SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYN 411


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 228/432 (52%), Gaps = 30/432 (6%)

Query: 174 LAKGFHLLSQISGAWKVI---QKLLIKGSDPDIVTYTVLICGYCQIGNV------EEGLK 224
             K F  L +I+    VI    ++ ++G   D+V   +L+  +C +G V      +E L 
Sbjct: 11  FGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKVKETLH 70

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
             + ++++GF+LN ++Y  L+  +CK+G    A+ +L  ++ + ++P++V YS +I  LC
Sbjct: 71  FHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLC 130

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K   V  A  LY++M  KRISP+   +  ++ G      + EA   F+ +++ N   D+ 
Sbjct: 131 KDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIY 190

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            +NI++DG  K G + +A  +   +I++ + P ++T+NSL+ G+    +   A  + +T+
Sbjct: 191 TFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTM 250

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G+ P   +Y+  +N  C+   +   + LL+EM +K++ P  VTY+ +I GL K  ++
Sbjct: 251 ARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRI 310

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
            +A  L+ +M+  G   D ITYN+++ + CK   + KA  LL ++    ++P   TY IL
Sbjct: 311 FDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTIL 370

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKG- 583
           +DGLC NG LK+A       QE       V    +IK +  +    KA++   +M + G 
Sbjct: 371 VDGLCKNGRLKDA-------QE-------VYQILLIKGYHLDSLFDKALSLLSKMEDNGC 416

Query: 584 ------FEISIR 589
                 FEI IR
Sbjct: 417 TPNPVTFEILIR 428



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 215/447 (48%), Gaps = 7/447 (1%)

Query: 201 PDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSG------RI 254
           P I  +  +     +I +    + L   M  +G + +++  ++L++  C  G      ++
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65

Query: 255 DEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAI 314
            E L    ++ A G + + V+Y  LI GLCK  +   A+Q+   +    + PN   +  I
Sbjct: 66  KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125

Query: 315 LLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRI 374
           +  LC+ +++ +A   +  +++     DV+ YN ++ G + +G + EAV L+ Q++ K I
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185

Query: 375 SPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLA 434
            P I TFN L+ G CK G++  AR +L  +    ++P  +TY + M+ Y       +   
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATF 245

Query: 435 LLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFC 494
           +   M  + + P   +Y+V+I GLCK   + EAV LL++M+   + P+ +TY+++I    
Sbjct: 246 VFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLH 305

Query: 495 KCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKV 554
           K   +  A+ L+N+M          TYN L+D LC N  +  A  LL  +++  I     
Sbjct: 306 KSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIY 365

Query: 555 AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEI-SIRDYTKSFFCMMLSNGFPPDQEICEV 613
            YT ++   C  G +  A   +  ++ KG+ + S+ D   S    M  NG  P+    E+
Sbjct: 366 TYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEI 425

Query: 614 MLIAFHQGGDLGSVFELAAVMIKSGLL 640
           ++ A  +        EL   MI  GLL
Sbjct: 426 LIRALFENDMNDKAVELLREMIARGLL 452



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 215/441 (48%), Gaps = 27/441 (6%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM------ 149
           P++     I +   K+        L   M   G+  D  + NIL++  C  G +      
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +E L F +D+   G + + ++Y  L  G     +   A +V++ +      P++V Y+ +
Sbjct: 66  KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125

Query: 210 ICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGL 269
           I   C+   V +   L   ML +    +VI Y+ L+      GR+ EA+GL  +M    +
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185

Query: 270 KPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARM 329
           KPD+ T++IL+ GLCK+ ++ KA  +   M  + + P+   + +++ G    +   +A  
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATF 245

Query: 330 YFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFC 389
            F+++       DV  Y++MI+G  K   + EAV L +++  K ++P+ VT++SLI G  
Sbjct: 246 VFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLH 305

Query: 390 KNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
           K+G++ DA  L++ +   G     +TY + ++A C+   + + + LL +++ + I P   
Sbjct: 306 KSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIY 365

Query: 450 TYTVVIKGLCKQWKLQEA---------------------VQLLEDMYVIGVTPDQITYNT 488
           TYT+++ GLCK  +L++A                     + LL  M   G TP+ +T+  
Sbjct: 366 TYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEI 425

Query: 489 IIRSFCKCKDLRKAFQLLNQM 509
           +IR+  +     KA +LL +M
Sbjct: 426 LIRALFENDMNDKAVELLREM 446



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 205/412 (49%), Gaps = 31/412 (7%)

Query: 97  SVVSLNAIMSRYCKLG---FAEVAKGLFCL---MLKYGLHPDAFSYNILIHGLCIAGSME 150
            +V+LN +++ +C LG     +  K        ++  G   +  SY  LI GLC AG   
Sbjct: 42  DLVNLNILVNCFCHLGQVCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETR 101

Query: 151 EALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLI 210
            A++   ++    V+P+ + YS +         +  A+ +  ++L+K   PD++TY  L+
Sbjct: 102 AAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLM 161

Query: 211 CGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLK 270
            G   +G ++E + L   ML +  K ++  +++L+  +CK G + +A  +L  M    + 
Sbjct: 162 YGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVD 221

Query: 271 PDLVTYSILIRG--LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           PD++TY+ L+ G  L KQ+  +KA  ++N M  + ++P+  ++  ++ GLC+ +M+ EA 
Sbjct: 222 PDVITYNSLMDGYFLVKQE--NKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAV 279

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
                +   +   + V Y+ +IDG  K G I +A  L  ++  +     ++T+NSL+   
Sbjct: 280 NLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDAL 339

Query: 389 CKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQ------------------ 430
           CKN +V  A  LL  IK  G++P   TYT  ++  C+ G ++                  
Sbjct: 340 CKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDS 399

Query: 431 ---RLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGV 479
              + L+LL +ME     P  VT+ ++I+ L +     +AV+LL +M   G+
Sbjct: 400 LFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARGL 451



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 190/395 (48%), Gaps = 14/395 (3%)

Query: 50  LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYC 109
            +DD+       N  +   +IDGLC+    + A+  L+   G    P+VV  + I+   C
Sbjct: 71  FHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLC 130

Query: 110 KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAI 169
           K      A  L+  ML   + PD  +YN L++G  I G ++EA+   N M    ++PD  
Sbjct: 131 KDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIY 190

Query: 170 TYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVM 229
           T++IL  G     ++  A  V+  ++ +  DPD++TY  L+ GY  +    +   +   M
Sbjct: 191 TFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTM 250

Query: 230 LSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKV 289
             +G   +V +YSV+++ +CK+  +DEA+ LL EM +  + P+ VTYS LI GL K  ++
Sbjct: 251 ARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRI 310

Query: 290 HKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIM 349
             A  L NEM ++    +   + ++L  LC+   + +A      +       D+  Y I+
Sbjct: 311 FDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTIL 370

Query: 350 IDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGL 409
           +DG  K G + +A ++Y+ L              LI G+  +     A  LL  ++ +G 
Sbjct: 371 VDGLCKNGRLKDAQEVYQIL--------------LIKGYHLDSLFDKALSLLSKMEDNGC 416

Query: 410 EPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAI 444
            P+ VT+   + A  E     + + LL+EM  + +
Sbjct: 417 TPNPVTFEILIRALFENDMNDKAVELLREMIARGL 451



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 186/368 (50%), Gaps = 17/368 (4%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVY 64
           + G    A+ V+  +  L ++ ++  Y++++Y+L    ++   +DLY  + +     +V 
Sbjct: 96  KAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVI 155

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T + ++ G     RL++A+    +   K   P + + N ++   CK G  + A+ +  +M
Sbjct: 156 TYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVM 215

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +K  + PD  +YN L+ G  +     +A    N M R GV PD  +YS++  G      +
Sbjct: 216 IKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMV 275

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  +++++  K   P+ VTY+ LI G  + G + +   L   M ++G   +VI Y+ L
Sbjct: 276 DEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSL 335

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           L ++CK+ ++D+A+ LL +++  G++PD+ TY+IL+ GLCK  ++  A ++Y  +  K  
Sbjct: 336 LDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIK-- 393

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
                  G  L  L +K +   ++M  +      C  + V + I+I    +     +AV+
Sbjct: 394 -------GYHLDSLFDKALSLLSKMEDNG-----CTPNPVTFEILIRALFENDMNDKAVE 441

Query: 365 LYRQLIEK 372
           L R++I +
Sbjct: 442 LLREMIAR 449



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 128/263 (48%), Gaps = 6/263 (2%)

Query: 336 MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVA 395
           M+N    +  +  +    VK+ +    + L  Q+  + I   +V  N L+  FC  G+V 
Sbjct: 1   MNNPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVC 60

Query: 396 DARRLLDTIKLH------GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHV 449
              ++ +T+  H      G + + V+Y T ++  C+ G  +  + +L+ ++   + P  V
Sbjct: 61  LNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVV 120

Query: 450 TYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQM 509
            Y+ +I  LCK   + +A  L   M +  ++PD ITYNT++        L++A  L NQM
Sbjct: 121 MYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQM 180

Query: 510 WLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
            L N++P   T+NIL+DGLC  G++K A  +L  + + ++    + Y +++  +      
Sbjct: 181 LLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQE 240

Query: 570 HKAMTFFCQMVEKGFEISIRDYT 592
           +KA   F  M  +G    +  Y+
Sbjct: 241 NKATFVFNTMARRGVTPDVHSYS 263



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/238 (20%), Positives = 97/238 (40%), Gaps = 26/238 (10%)

Query: 411 PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCK------QWKL 464
           P+   +     +  +  +   +++L  +ME + I    V   +++   C         K+
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           +E +   +D+   G   +Q++Y T+I   CK  + R A Q+L  +    ++P    Y+ +
Sbjct: 66  KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
           I  LC +  + +A  L   +    IS   + Y T++      G + +A+  F QM+ K  
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185

Query: 585 EISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
           +                    PD     +++    + G++     + AVMIK  + PD
Sbjct: 186 K--------------------PDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPD 223


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 229/474 (48%), Gaps = 5/474 (1%)

Query: 96  PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEF 155
           P      A++   C+ G  E    L   M +YG   D  +  +++  LC  G  ++  EF
Sbjct: 71  PMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEF 130

Query: 156 TNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQ 215
              M   G  P+ + Y+    G      +  A+ V+++++ +G  P++ T+T LI G C+
Sbjct: 131 FRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCK 190

Query: 216 IGNVEEGLKL-REVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           IG  E   +L  +++ S  +K NV  Y+V++   C+ G++  A  LL  M   GLKP+  
Sbjct: 191 IGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTN 250

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+ LI G CK     +A +L N+M  +   PN + + A++ G C+K  I EA       
Sbjct: 251 TYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMA 310

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
                  D + Y I+I  + K G+I  A+ L+ +++E    P I  + SLI  +C+  ++
Sbjct: 311 TSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQM 370

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            ++++  D   + GL P+  TYT+ +  YC+ G     L + + M         +TY  +
Sbjct: 371 EESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGAL 430

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I GLCK+ +L+EA  L E M    + P ++T  T+   +C+ +    A  +L+++   + 
Sbjct: 431 ISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRL---DK 487

Query: 515 EPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
                T ++++  L   GD+  A   L  + + + ++    YT  I + C E +
Sbjct: 488 RQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINS-CYENN 540



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 209/429 (48%), Gaps = 4/429 (0%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T ++V+  LC++ R +D   F +        P+VV+  A +   CK  + + A  +   M
Sbjct: 110 TCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEM 169

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALE-FTNDMGRHGVEPDAITYSILAKGFHLLSQ 183
           +  GL P+ +++  LI GLC  G  E A   F   +     +P+  TY+++  G+    +
Sbjct: 170 VGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGK 229

Query: 184 ISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSV 243
           ++ A  ++ +++ +G  P+  TYT LI G+C+ G+ +   +L   M  +GF  N+  Y+ 
Sbjct: 230 LARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNA 289

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++   CK G+I EA  +L    + GLK D +TY+ILI   CKQ  +  A+ L++ M    
Sbjct: 290 VIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENG 349

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
             P+  A+ +++   C++  + E++ +FD  +M   +     Y  MI GY K+G    A+
Sbjct: 350 CCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLAL 409

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           +++ ++++       +T+ +LI G CK  ++ +A+ L + +    L P  VT  T    Y
Sbjct: 410 RVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEY 469

Query: 424 CEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQ 483
           C        +++L  ++ +     H T  VV++ L     +  A   L+ +       D 
Sbjct: 470 CRREKTSIAVSVLDRLDKRQ--QVH-TVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDH 526

Query: 484 ITYNTIIRS 492
            TY   I S
Sbjct: 527 ATYTGFINS 535



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 200/408 (49%), Gaps = 6/408 (1%)

Query: 2   LAFVYSRTGMVHDAVFVIAKMKE----LDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVS 57
           L  V  R G V +   ++A M      LD         SL    R  D+  + +  +  +
Sbjct: 79  LVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS-EFFRRMLET 137

Query: 58  ETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVA 117
            TP NV   +  IDGLC++  ++ A   L+E  G+   P+V +   ++   CK+G+ E A
Sbjct: 138 GTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERA 197

Query: 118 KGLFCLMLKYGLH-PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
             LF  ++K   + P+  +Y ++I G C  G +  A      M   G++P+  TY+ L  
Sbjct: 198 FRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIG 257

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G         A++++ K+  +G  P+I TY  +I G+C+ G ++E  K+  +  SQG K 
Sbjct: 258 GHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKF 317

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           + I Y++L++  CK G I  AL L   M   G  PD+  Y+ LI   C+Q ++ ++ + +
Sbjct: 318 DKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFF 377

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           ++     + P    + +++ G C+    T A   F+ ++ + C  D + Y  +I G  K 
Sbjct: 378 DKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKE 437

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
             + EA  LY  +++KR+ P  VT  +L + +C+  K + A  +LD +
Sbjct: 438 SRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRL 485



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 216/474 (45%), Gaps = 31/474 (6%)

Query: 115 EVAKGLFCLMLKYGLHPDAFSY--NILIHGL--CI------------AGSMEEALEFTND 158
           EV +G+     + G  P+A      +  HGL  C+             GS   A +  + 
Sbjct: 4   EVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDG 63

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQI---SGAWKVIQKLLIK----GSDPDIVTYTVLIC 211
           M R GV P       + +GF  L  +    G  + +  LL      G   D  T TV++ 
Sbjct: 64  MTRAGVSP-------MNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 116

Query: 212 GYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKP 271
             C+ G  ++  +    ML  G   NV+ Y+  +  +CK   + +A  +L EM   GLKP
Sbjct: 117 SLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 176

Query: 272 DLVTYSILIRGLCKQDKVHKAIQLYNEMC-SKRISPNSFAHGAILLGLCEKEMITEARMY 330
           ++ T++ LI GLCK     +A +L+ ++  S    PN   +  ++ G C +  +  A M 
Sbjct: 177 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 236

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
              ++      +   Y  +I G+ K G+   A +L  ++ ++   P+I T+N++I GFCK
Sbjct: 237 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 296

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
            GK+ +A ++L      GL+   +TYT  +  +C++G+I   L L   M      P    
Sbjct: 297 KGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEA 356

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           YT +I   C+Q +++E+ +  +   +IG+ P + TY ++I  +CK      A ++  +M 
Sbjct: 357 YTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMV 416

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHC 564
            +     S TY  LI GLC    L+ A  L   + +  +   +V   T+   +C
Sbjct: 417 QNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYC 470



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 194/415 (46%), Gaps = 16/415 (3%)

Query: 244 LLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKR 303
           ++++  ++GR+ EA  ++ EM + GL   + T + ++R   +      A ++++ M    
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 304 ISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAV 363
           +SP +   GA+++  C +  + E      ++       D     +++    + G   +  
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 364 QLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAY 423
           + +R+++E    P++V + + I G CK   V  A  +L+ +   GL+P+  T+TT ++  
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 424 CEEGNIQRLLAL-LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPD 482
           C+ G  +R   L L+ +++ +  P   TYTV+I G C++ KL  A  LL  M   G+ P+
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248

Query: 483 QITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLV 542
             TY T+I   CK     +AF+L+N+M      P   TYN +IDG C  G ++ A  +L 
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 308

Query: 543 SLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT---------- 592
                 +   K+ YT +I  HC +G +  A+  F +MVE G    I  YT          
Sbjct: 309 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQR 368

Query: 593 -----KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                + FF   L  G  P ++    M+  + + G       +   M+++G   D
Sbjct: 369 QMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFAD 423



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 168/375 (44%), Gaps = 3/375 (0%)

Query: 209 LICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVG 268
           ++  + + G + E   +   M S G  L V   + +L    ++G    A  +   M   G
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 269 LKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEAR 328
           + P    +  L+   C++ KV +   L   M     S ++     ++  LCEK    +  
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 329 MYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGF 388
            +F  ++ +    +VV Y   IDG  K   + +A  +  +++ + + P++ T  +LI G 
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 389 CKNGKVADARRL-LDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPT 447
           CK G    A RL L  IK    +P+  TYT  +  YC EG + R   LL  M  + + P 
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248

Query: 448 HVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLN 507
             TYT +I G CK      A +L+  M   G  P+  TYN +I  FCK   +++A+++L 
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 308

Query: 508 QMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG 567
                 L+    TY ILI   C  G +  A  L   + E+       AYT++I  +C + 
Sbjct: 309 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQR 368

Query: 568 DVHKAMTFF--CQMV 580
            + ++  FF  C M+
Sbjct: 369 QMEESQKFFDKCLMI 383



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 172/375 (45%), Gaps = 39/375 (10%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAI-LFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGL 120
           NVYT++ +IDGLC+    + A  LFL+      + P+V +   ++  YC+ G    A+ L
Sbjct: 177 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 236

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M++ GL P+  +Y  LI G C  GS + A E  N M + G  P+  TY+ +  GF  
Sbjct: 237 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 296

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
             +I  A+KV++    +G   D +TYT+LI  +C+ G++   L L + M+  G   ++ A
Sbjct: 297 KGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEA 356

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKP----------------------------- 271
           Y+ L+S+ C+  +++E+     +   +GL P                             
Sbjct: 357 YTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMV 416

Query: 272 ------DLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMIT 325
                 D +TY  LI GLCK+ ++ +A  LY  M  KR+ P       +    C +E  +
Sbjct: 417 QNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTS 476

Query: 326 EARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
            A    D L   +  Q V   ++++     LG++  A    ++++++  +    T+   I
Sbjct: 477 IAVSVLDRL---DKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFI 533

Query: 386 YGFCKNGKVADARRL 400
               +N + A A  +
Sbjct: 534 NSCYENNRYALASEM 548



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 132/301 (43%), Gaps = 23/301 (7%)

Query: 349 MIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHG 408
           M+  + + G + EA  +  ++    +   + T N ++    + G    AR++ D +   G
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 409 LEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAV 468
           + P    +   +   C EG ++ + ALL  M        + T TVV++ LC++ + ++  
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 469 QLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGL 528
           +    M   G  P+ + Y   I   CK + +++AF +L +M    L+P   T+  LIDGL
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 529 CVNGDLKNADCLLVSLQEHNISLTKV-AYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEIS 587
           C  G  + A  L + L + +     V  YT +I  +C EG + +A     +MVE+G + +
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248

Query: 588 IRDYTKSFFCMMLSNGFPPDQEICEVMLIAFH-QGGDLGSVFELAAVMIKSGLLPDKFLI 646
              YT                      LI  H +GG     FEL   M + G LP+ +  
Sbjct: 249 TNTYT---------------------TLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTY 287

Query: 647 N 647
           N
Sbjct: 288 N 288


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 226/456 (49%), Gaps = 1/456 (0%)

Query: 136 YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 195
           Y+ +++    + S ++AL F + M   G  P + T++ L       +    AW +  +L 
Sbjct: 92  YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK 151

Query: 196 IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 255
            K    D  ++ ++I G C+ G   +G +L  ++   G   NV+ Y+ L+   CK G + 
Sbjct: 152 SK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210

Query: 256 EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 315
            A  L  +M+ +GL P+  TYS+L+ G  KQ    +  Q+Y  M    I PN++A+  ++
Sbjct: 211 LAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270

Query: 316 LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
              C   M+ +A   F  +        V+ YNI+I G  +    GEAV+L  ++ +  +S
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 376 PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 435
           P+IVT+N LI GFC  GK+  A RL + +K  GL P+ VTY T +  Y +  N+   L L
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390

Query: 436 LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 495
           ++EME + I P+ VTYT++I    +    ++A ++   M   G+ PD  TY+ +I   C 
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCV 450

Query: 496 CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 555
             ++++A +L   +   +L+P S  YN +I G C  G    A  LL  +    +     +
Sbjct: 451 HGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVAS 510

Query: 556 YTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDY 591
           + + I   C +    +A     QM+  G + S+  Y
Sbjct: 511 FCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 239/513 (46%), Gaps = 41/513 (7%)

Query: 59  TPRNVYTN--SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEV 116
           TP   YT     +++          A+ FL     +   P   + N +M    +  + + 
Sbjct: 83  TPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDK 142

Query: 117 AKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAK 176
           A  +F   LK  +  DA+S+ I+I G C AG   +       +   G+ P+ + Y+ L  
Sbjct: 143 AWWIFN-ELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLID 201

Query: 177 GFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKL 236
           G      +  A  +  K+   G  P+  TY+VL+ G+ + G   EG ++ E M   G   
Sbjct: 202 GCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVP 261

Query: 237 NVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLY 296
           N  AY+ L+S  C  G +D+A  +  EM   G+   ++TY+ILI GLC+  K  +A++L 
Sbjct: 262 NAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV 321

Query: 297 NEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKL 356
           +++    +SPN                                   +V YNI+I+G+  +
Sbjct: 322 HKVNKVGLSPN-----------------------------------IVTYNILINGFCDV 346

Query: 357 GNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTY 416
           G +  AV+L+ QL    +SP++VT+N+LI G+ K   +A A  L+  ++   + PS VTY
Sbjct: 347 GKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTY 406

Query: 417 TTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYV 476
           T  ++A+      ++   +   ME   + P   TY+V+I GLC    ++EA +L + +  
Sbjct: 407 TILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGE 466

Query: 477 IGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKN 536
           + + P+ + YNT+I  +CK     +A +LLN+M    + P  A++   I  LC +   K 
Sbjct: 467 MHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKE 526

Query: 537 ADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDV 569
           A+ LL  +    +  +   Y  +   H  +GDV
Sbjct: 527 AELLLGQMINSGLKPSVSLYKMV---HKVKGDV 556



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 219/431 (50%), Gaps = 10/431 (2%)

Query: 32  QTYNSL---LYNLRHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQE 88
            T+N+L   L    + D  W +++++K S+   + Y+  I+I G C+          L  
Sbjct: 125 NTFNNLMCLLIRSNYFDKAWWIFNELK-SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAM 183

Query: 89  TAGKEFG--PSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
              +EFG  P+VV    ++   CK G   +AK LFC M + GL P+  +Y++L++G    
Sbjct: 184 L--EEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQ 241

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
           G   E  +   +M R G+ P+A  Y+ L   +     +  A+KV  ++  KG    ++TY
Sbjct: 242 GLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTY 301

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
            +LI G C+     E +KL   +   G   N++ Y++L++  C  G++D A+ L  ++++
Sbjct: 302 NILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKS 361

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            GL P LVTY+ LI G  K + +  A+ L  EM  + I+P+   +  IL+    +   TE
Sbjct: 362 SGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTY-TILIDAFARLNYTE 420

Query: 327 ARMYFDSLI-MSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLI 385
                 SL+  S  + DV  Y+++I G    GN+ EA +L++ L E  + P+ V +N++I
Sbjct: 421 KACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMI 480

Query: 386 YGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIG 445
           +G+CK G    A RLL+ +   G+ P+  ++ + +   C +   +    LL +M    + 
Sbjct: 481 HGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLK 540

Query: 446 PTHVTYTVVIK 456
           P+   Y +V K
Sbjct: 541 PSVSLYKMVHK 551



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 192/417 (46%), Gaps = 16/417 (3%)

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMC 300
           Y  ++++   S   D+AL  L+ M   G  P   T++ L+  L + +   KA  ++NE+ 
Sbjct: 92  YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK 151

Query: 301 SKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIG 360
           SK +  ++++ G ++ G CE     +       L       +VV+Y  +IDG  K GN+ 
Sbjct: 152 SK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210

Query: 361 EAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFM 420
            A  L+ ++    + P+  T++ L+ GF K G   +  ++ + +K  G+ P+A  Y   +
Sbjct: 211 LAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270

Query: 421 NAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVT 480
           + YC  G + +   +  EM  K I    +TY ++I GLC+  K  EAV+L+  +  +G++
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 481 PDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCL 540
           P+ +TYN +I  FC    +  A +L NQ+    L PT  TYN LI G     +L  A  L
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390

Query: 541 LVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYT-------- 592
           +  ++E  I+ +KV YT +I A        KA      M + G    +  Y+        
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCV 450

Query: 593 -------KSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
                     F  +      P+  I   M+  + + G       L   M+ SG++P+
Sbjct: 451 HGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPN 507



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 170/397 (42%), Gaps = 26/397 (6%)

Query: 251 SGRIDEALGLLYEMEAVGLKPDLV---TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPN 307
           SGRI  +L L  ++      P L     Y  ++          +A+   + M  +   P 
Sbjct: 66  SGRIPSSLML--QLTQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPL 123

Query: 308 SFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYR 367
           S     ++  L       +A   F+ L  S  + D   + IMI G  + G   +  +L  
Sbjct: 124 SNTFNNLMCLLIRSNYFDKAWWIFNEL-KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLA 182

Query: 368 QLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEG 427
            L E  +SP++V + +LI G CK G V  A+ L   +   GL P+  TY+  MN + ++G
Sbjct: 183 MLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQG 242

Query: 428 NIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYN 487
             +    + + M+   I P    Y  +I   C    + +A ++  +M   G+    +TYN
Sbjct: 243 LQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYN 302

Query: 488 TIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEH 547
            +I   C+ K   +A +L++++    L P   TYNILI+G C  G +  A  L   L+  
Sbjct: 303 ILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSS 362

Query: 548 NISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPD 607
            +S T V Y T+I  +    ++  A+    +M E+    S   YT               
Sbjct: 363 GLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYT--------------- 407

Query: 608 QEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKF 644
                +++ AF +        E+ ++M KSGL+PD +
Sbjct: 408 -----ILIDAFARLNYTEKACEMHSLMEKSGLVPDVY 439



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 136/302 (45%), Gaps = 32/302 (10%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y   GMV  A  V A+M+E  +   + TYN L                            
Sbjct: 273 YCNGGMVDKAFKVFAEMREKGIACGVMTYNIL---------------------------- 304

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
               I GLC+  +  +A+  + +       P++V+ N +++ +C +G  + A  LF  + 
Sbjct: 305 ----IGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLK 360

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
             GL P   +YN LI G     ++  AL+   +M    + P  +TY+IL   F  L+   
Sbjct: 361 SSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTE 420

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
            A ++   +   G  PD+ TY+VLI G C  GN++E  KL + +     + N + Y+ ++
Sbjct: 421 KACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMI 480

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
              CK G    AL LL EM   G+ P++ ++   I  LC+ +K  +A  L  +M +  + 
Sbjct: 481 HGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLK 540

Query: 306 PN 307
           P+
Sbjct: 541 PS 542



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 38/269 (14%)

Query: 14  DAVFVIAKMKELDLKVSIQTYNSLLY---NLRHTDIMWDLYDDIKVSETPRNVYTNSIVI 70
           +AV ++ K+ ++ L  +I TYN L+    ++   D    L++ +K S     + T + +I
Sbjct: 316 EAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLI 375

Query: 71  DGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLH 130
            G  +   L  A+  ++E   +   PS V+   ++  + +L + E A  +  LM K GL 
Sbjct: 376 AGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLV 435

Query: 131 PDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKV 190
           PD ++Y++LIHGLC+ G+M+EA +    +G   ++P+++ Y+                  
Sbjct: 436 PDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYN------------------ 477

Query: 191 IQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCK 250
                             +I GYC+ G+    L+L   M+  G   NV ++   +  +C+
Sbjct: 478 -----------------TMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCR 520

Query: 251 SGRIDEALGLLYEMEAVGLKPDLVTYSIL 279
             +  EA  LL +M   GLKP +  Y ++
Sbjct: 521 DEKWKEAELLLGQMINSGLKPSVSLYKMV 549


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 228/460 (49%), Gaps = 53/460 (11%)

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
           +++GL  D   YN L++ L     ++      + M   G++PD  T++IL K      QI
Sbjct: 150 VEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQI 209

Query: 185 SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 244
             A  V++++   G  PD  T+T L+ G+ + GN++   +++E ML  G  +  +  +VL
Sbjct: 210 RPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVL 269

Query: 245 LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 304
           +   CK GRI+EAL  + EM   G                   K   AI+LYNEM +K  
Sbjct: 270 VHGFCKEGRIEEALSFIDEMSNEG-------------------KHTMAIELYNEMKNKGC 310

Query: 305 SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 364
            P+ F +  ++  LC +  + EA      + +S C ++V+ YN +IDG+ K   I EA +
Sbjct: 311 QPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEE 370

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           ++ Q+  + +S + VT+N+LI G CK+ +V +A +L+D + + GL+P   TY + +  +C
Sbjct: 371 IFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFC 430

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
            EG+IQ+   ++Q M +    P  VTY  +I GLCK  +++ A +LL  + + G+     
Sbjct: 431 REGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPH 490

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
            YN +I++  K K  ++A +L  +M      P + TY I+  GL  +G            
Sbjct: 491 AYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSG------------ 538

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGF 584
                                 G + +A+ F  +M+EKGF
Sbjct: 539 ----------------------GPIGEAVDFVIEMIEKGF 556



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 235/496 (47%), Gaps = 40/496 (8%)

Query: 166 PDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLIC--GYCQIGNVEEGL 223
           P++  Y  + +    +   +    ++Q++  KG D  I    +LI    Y +    EE L
Sbjct: 85  PNSSIYEEILRKLGKVGSFNSMKDILQEM--KGLDCQIDRGVLLIFIDSYAKFELYEEIL 142

Query: 224 KLREVMLSQ-GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
            + EVM  + G  L+ + Y+ LL+ +    ++     +   M + G+KPD+ T++ILI+ 
Sbjct: 143 CIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKA 202

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           LCK  ++  AI +  EM S  + P+      ++ G  E+  +  A    + ++ + C   
Sbjct: 203 LCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVT 262

Query: 343 VVLYNIMIDGYVKLGNIGEA----------------VQLYRQLIEKRISPSIVTFNSLIY 386
            V  N+++ G+ K G I EA                ++LY ++  K   P   T+N LI 
Sbjct: 263 NVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLID 322

Query: 387 GFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGP 446
             C  GK+ +A  LL  +++ G   + +TY T ++ +C+   I+    +  +ME + +  
Sbjct: 323 SLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSR 382

Query: 447 THVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLL 506
             VTY  +I GLCK  ++QEA QL++ M + G+ PD+ TYN+++  FC+  D++KA  ++
Sbjct: 383 NSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIV 442

Query: 507 NQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAE 566
             M  +  EP   TY  LI GLC  G ++ A  LL S+Q   + LT  AY  +I+A    
Sbjct: 443 QTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKR 502

Query: 567 GDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGS 626
               +AM  F +M EKG       Y   F    LSN                  GG +G 
Sbjct: 503 KRTKEAMRLFREMEEKGNTPDAFTYKIVF--RGLSNS-----------------GGPIGE 543

Query: 627 VFELAAVMIKSGLLPD 642
             +    MI+ G LP+
Sbjct: 544 AVDFVIEMIEKGFLPE 559



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 229/501 (45%), Gaps = 27/501 (5%)

Query: 12  VHDAVFVIAKMKELDLKVSIQT--YNSLLYNL---RHTDIMWDLYDDIKVSETPRNVYTN 66
           +++ +  I ++ E++  +++ T  YN LL  L       ++ +++  +       +V T 
Sbjct: 137 LYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTF 196

Query: 67  SIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLK 126
           +I+I  LC+  +++ AIL ++E +     P   +   +M  + + G  + A  +   ML 
Sbjct: 197 NILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLD 256

Query: 127 YGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISG 186
            G      + N+L+HG C  G +EEAL F ++M   G    AI                 
Sbjct: 257 AGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAI----------------- 299

Query: 187 AWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLS 246
             ++  ++  KG  PD  TY +LI   C  G ++E L L   M   G   NVI Y+ L+ 
Sbjct: 300 --ELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLID 357

Query: 247 SMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISP 306
             CK+ +I+EA  +  +ME  GL  + VTY+ LI GLCK  +V +A QL ++M  + + P
Sbjct: 358 GFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKP 417

Query: 307 NSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLY 366
           + F + ++L   C +  I +A     ++  + C  D+V Y  +I G  K G +  A +L 
Sbjct: 418 DKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLL 477

Query: 367 RQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEE 426
           R +  K +  +   +N +I    K  +  +A RL   ++  G  P A TY          
Sbjct: 478 RSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNS 537

Query: 427 GN-IQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           G  I   +  + EM  K   P   ++ ++ +GLC    +++ +  L D+ +      Q  
Sbjct: 538 GGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLC-SLSMEDTLIKLVDLVMEKANFSQ-N 595

Query: 486 YNTIIRSFCKCKDLRKAFQLL 506
              +IR F K +  + A   L
Sbjct: 596 EVVMIRGFLKIRKFQDALATL 616



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 171/337 (50%), Gaps = 8/337 (2%)

Query: 42  RHTDIMWDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSL 101
           +HT +  +LY+++K      + +T +++ID LC + +LQ+A+  L+E        +V++ 
Sbjct: 294 KHT-MAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITY 352

Query: 102 NAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGR 161
           N ++  +CK    E A+ +F  M   GL  ++ +YN LI GLC +  ++EA +  + M  
Sbjct: 353 NTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIM 412

Query: 162 HGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEE 221
            G++PD  TY+ +   F     I  A  ++Q +   G +PDIVTY  LI G C+ G VE 
Sbjct: 413 EGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEV 472

Query: 222 GLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIR 281
             +L   +  +G  L   AY+ ++ ++ K  R  EA+ L  EME  G  PD  TY I+ R
Sbjct: 473 ASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFR 532

Query: 282 GLCKQ-DKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIM--SN 338
           GL      + +A+    EM  K   P   +   +  GLC   M  +  +    L+M  +N
Sbjct: 533 GLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSM-EDTLIKLVDLVMEKAN 591

Query: 339 CIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 375
             Q+ V   +MI G++K+    +A+     L++ R S
Sbjct: 592 FSQNEV---VMIRGFLKIRKFQDALATLGGLLDSRKS 625


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/545 (28%), Positives = 255/545 (46%), Gaps = 34/545 (6%)

Query: 67  SIVIDGLCQQSRLQD-AILFLQETAGKEFGPSVVSLNAI----MSR-YCKLGFAEVAKGL 120
           +I+I G+C    L    ++ L E A  E     V LN +     +R  C +G  E A  +
Sbjct: 50  NILIGGICSTEDLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNV 109

Query: 121 FCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHL 180
              M+  G  PD+ +Y+ +I  LC A  +E+A +   +M R+G+ PD  TY+ L   F  
Sbjct: 110 IREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCK 169

Query: 181 LSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIA 240
           +  I  A     ++   G  P++VTYT LI  Y +   +    ++ E+MLS G   N++ 
Sbjct: 170 VGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVT 229

Query: 241 YSVLLSSMCKSGRIDEALGLLYEMEAVGL-----------------KPDLVTYSILIRGL 283
           Y+ L+   CK+G  ++A  +   M+   +                 +P++VTY  L+ GL
Sbjct: 230 YTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGL 289

Query: 284 CKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDV 343
           CK  KV +A  L   M  +   PN   + A++ G C+   + EA+  F  ++   C  +V
Sbjct: 290 CKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNV 349

Query: 344 VLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDT 403
             Y+ +ID   K   +  A+++  +++E   +P++V +  ++ G CK GK  +A RL+  
Sbjct: 350 YTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLM 409

Query: 404 IKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWK 463
           ++  G  P+ VTYT  ++ + + G + R L LLQ M +K   P  +TY V+I   C    
Sbjct: 410 MEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGL 469

Query: 464 LQEAVQLLEDMYVIGVTPDQI-TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYN 522
           L +A +LLE+M      P  I  Y  +I  F    +   +  LL ++      P    Y 
Sbjct: 470 LDDAHKLLEEMKQT-YWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGSVPILPVYK 526

Query: 523 ILIDGLCVNGDLKNADCLLVSLQEHNISLTKV---AYTTIIKAHCAEGDVHKAMTFFCQM 579
           +LID     G L+ A    + L E   S +      Y ++I++      V KA   +  M
Sbjct: 527 LLIDNFIKAGRLEMA----LELHEELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDM 582

Query: 580 VEKGF 584
             +GF
Sbjct: 583 TRRGF 587



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 226/500 (45%), Gaps = 50/500 (10%)

Query: 159 MGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGN 218
           M   G  P  + ++ L   +        A+K+++K++I G  P  V Y +LI G C   +
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 219 VEE----GLKLREV--MLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPD 272
           +      GL  R    ML  G  LN +        +C  G+ ++A  ++ EM + G  PD
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 273 LVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFD 332
             TYS +I  LC   KV KA QL+ EM    I+P+ + +  +L   C+  +I +AR +FD
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 333 SLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
            +    C  +VV Y  +I  Y+K   +  A +++  ++     P+IVT+ +LI G CK G
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 393 KVADARRLLDTIKLHGLE-PSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTY 451
           +   A ++   +K   ++ P    Y   +++  +E N+                   VTY
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNV-------------------VTY 282

Query: 452 TVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWL 511
             ++ GLCK  K++EA  LLE M + G  P+QI Y+ +I  FCK   L +A ++  +M  
Sbjct: 283 GALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLG 342

Query: 512 HNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
           H   P   TY+ LID L  +  L  A  +L  + E++ +   V YT ++   C  G   +
Sbjct: 343 HGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDE 402

Query: 572 AMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGFPPDQEICEVMLIAFHQGGDLGSVFELA 631
           A      M EKG   ++  YT                     M+  F + G +    EL 
Sbjct: 403 AYRLMLMMEEKGCYPNVVTYT--------------------AMIDGFGKAGRVDRCLELL 442

Query: 632 AVMIKSGLLPD----KFLIN 647
            +M   G  P+    + LIN
Sbjct: 443 QLMTSKGCAPNFITYRVLIN 462



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 219/479 (45%), Gaps = 34/479 (7%)

Query: 123 LMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKG----- 177
           +M+  G +P    +N L+H  C +G    A +    M   G +P  + Y+IL  G     
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 178 -FHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGY----CQIGNVEEGLKLREVMLSQ 232
               +  I  A +   ++L  G    +V   V +C +    C IG  E+   +   M+S+
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMG----VVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSK 116

Query: 233 GFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKA 292
           GF  +   YS ++  +C + ++++A  L  EM+  G+ PD+ TY+ L+   CK   + +A
Sbjct: 117 GFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQA 176

Query: 293 IQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDG 352
              ++EM     +PN   + A++    +   ++ A   F+ ++ + C+ ++V Y  +IDG
Sbjct: 177 RNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDG 236

Query: 353 YVKLGNIGEAVQLYRQLIEKRI-----------------SPSIVTFNSLIYGFCKNGKVA 395
           + K G   +A Q+Y ++   ++                  P++VT+ +L+ G CK  KV 
Sbjct: 237 HCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVK 296

Query: 396 DARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVI 455
           +AR LL+T+ L G EP+ + Y   ++ +C+ G +     +  +M      P   TY+ +I
Sbjct: 297 EARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLI 356

Query: 456 KGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLE 515
             L K  +L  A+++L  M      P+ + Y  ++   CK     +A++L+  M      
Sbjct: 357 DKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCY 416

Query: 516 PTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEG---DVHK 571
           P   TY  +IDG    G +     LL  +     +   + Y  +I   CA G   D HK
Sbjct: 417 PNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHK 475



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 214/490 (43%), Gaps = 20/490 (4%)

Query: 65  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 124
           T S VI  LC  S+++ A    QE       P V +   ++ R+CK+G  E A+  F  M
Sbjct: 124 TYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEM 183

Query: 125 LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 184
            + G  P+  +Y  LIH       +  A E    M  +G  P+ +TY+ L  G     + 
Sbjct: 184 QQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGET 243

Query: 185 SGAWKVIQKLLIKGSD-----------------PDIVTYTVLICGYCQIGNVEEGLKLRE 227
             A ++  ++     D                 P++VTY  L+ G C+   V+E   L E
Sbjct: 244 EKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLE 303

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQD 287
            M  +G + N I Y  L+   CK G++DEA  +  +M   G  P++ TYS LI  L K  
Sbjct: 304 TMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDK 363

Query: 288 KVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYN 347
           ++  A+++  +M     +PN   +  ++ GLC+     EA      +    C  +VV Y 
Sbjct: 364 RLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYT 423

Query: 348 IMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLH 407
            MIDG+ K G +   ++L + +  K  +P+ +T+  LI   C  G + DA +LL+ +K  
Sbjct: 424 AMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQT 483

Query: 408 GLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEA 467
                   Y   +  +  E      L LL E+      P    Y ++I    K  +L+ A
Sbjct: 484 YWPKHIGMYRKVIEGFSHE--FVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMA 541

Query: 468 VQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDG 527
           ++L E++        Q TY ++I S      + KAF+L + M      P  +    LI G
Sbjct: 542 LELHEELSSFSAAY-QNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKG 600

Query: 528 LCVNGDLKNA 537
           L   G  + A
Sbjct: 601 LLRVGKWEEA 610



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 169/352 (48%), Gaps = 37/352 (10%)

Query: 49  DLYDDIKVSETPR-NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSR 107
           D+Y  I  SE    NV T   ++DGLC+  ++++A   L+  + +   P+ +  +A++  
Sbjct: 264 DIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDG 323

Query: 108 YCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPD 167
           +CK+G  + A+ +F  ML +G  P+ ++Y+ LI  L     ++ AL+    M  +   P+
Sbjct: 324 FCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPN 383

Query: 168 AITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLRE 227
            + Y+ +  G   + +   A++++  +  KG  P++VTYT +I G+ + G V+  L+L +
Sbjct: 384 VVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQ 443

Query: 228 VMLSQGFKLNVIAYSVLLSSMCKSGRIDEA------------------------------ 257
           +M S+G   N I Y VL++  C +G +D+A                              
Sbjct: 444 LMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEF 503

Query: 258 ---LGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS-PNSFAHGA 313
              LGLL E+   G  P L  Y +LI    K  ++  A++L+ E+ S   +  N++    
Sbjct: 504 VASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLI 563

Query: 314 ILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
             L L  K  + +A   +  +     + ++ +   +I G +++G   EA+QL
Sbjct: 564 ESLTLACK--VDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 244/512 (47%), Gaps = 20/512 (3%)

Query: 50  LYDDIKVSETPR-----NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAI 104
           L D  +V E  R     NV T + +IDG C+  RL DA+  +   A     P   + N +
Sbjct: 166 LGDAERVVEAARASGTANVVTYTALIDGYCRSGRLADALRLI---ASMPVAPDTYTYNTV 222

Query: 105 MSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGV 164
           +   C     E A+ L   M++   HP+  ++   I   C  G ++ A+E    M ++G 
Sbjct: 223 LKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGC 282

Query: 165 EPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLK 224
            PD I YS L  GF    ++  A K++  +L +   P+ V Y   + G C  G  EE  +
Sbjct: 283 TPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGLCIAGRWEEVGE 339

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           L   M+ +    N   +S L++S+C++  ++ A+ +L +M+  G  PD+V+Y+ +I    
Sbjct: 340 LIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFS 399

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
            Q +   A++L   M  K   P++ +  A+L  LC+ +   +A      ++  +C  + +
Sbjct: 400 DQARADDALKLLKSMLCK---PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEM 456

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            +NI+ID   + G + +A++++  + + R  P IVT++SLI GF + G    A    D  
Sbjct: 457 TFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMA---FDLF 513

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
           +         +Y   +   C          L+ +M T+   P  VT+ ++I  LC++  +
Sbjct: 514 RSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLV 573

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
             A+ + E M   G+TPD  TYN +I  + +   L  A + L+ M     EP + +YN +
Sbjct: 574 NRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSI 630

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAY 556
           + GLC     K+A+ L+  +   N +  +V +
Sbjct: 631 LKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 255/529 (48%), Gaps = 17/529 (3%)

Query: 54  IKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGF 113
           +K S     V  N++V  G C+   L DA   + E A      +VV+  A++  YC+ G 
Sbjct: 142 LKASGAADAVSHNTLVA-GYCRDGSLGDAERVV-EAARASGTANVVTYTALIDGYCRSG- 198

Query: 114 AEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSI 173
             +A  L  L+    + PD ++YN ++ GLC A   E+A E   +M R+   P+ +T++ 
Sbjct: 199 -RLADALR-LIASMPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFAT 256

Query: 174 LAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQG 233
             + F     +  A ++++++   G  PD++ Y+ L+ G+ + G V+E LKL   ML   
Sbjct: 257 QIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLC-- 314

Query: 234 FKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAI 293
            + N + Y+  L  +C +GR +E   L+ EM      P+  T+S LI  LC+   V  A+
Sbjct: 315 -RPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAV 373

Query: 294 QLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGY 353
           ++  +M      P+  ++  I+    ++    +A     S++   C  D + +N ++   
Sbjct: 374 EVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCL 430

Query: 354 VKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSA 413
            K     +AV+L  ++++K    + +TFN LI   C+NG+V DA  + + +  +   P  
Sbjct: 431 CKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDI 490

Query: 414 VTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLED 473
           VTY++ +N + E+G  +    L + M  +A      +Y   +KGLC   +  +A +L+ D
Sbjct: 491 VTYSSLINGFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIAD 547

Query: 474 MYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
           M      P+++T+N +I S C+   + +A  +  QM  + + P   TYN LI+G    G 
Sbjct: 548 MVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGR 607

Query: 534 LKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEK 582
           L +A   L  L         ++Y +I+K  C       A     +M+ K
Sbjct: 608 LDDA---LKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRK 653



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 247/516 (47%), Gaps = 13/516 (2%)

Query: 6   YSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYT 65
           Y R G + DA  V+   +      ++ TY +L+     +  + D    I       + YT
Sbjct: 160 YCRDGSLGDAERVVEAARASG-TANVVTYTALIDGYCRSGRLADALRLIASMPVAPDTYT 218

Query: 66  NSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLML 125
            + V+ GLC   + + A   ++E       P+ V+    +  +C+ G  + A  L   M 
Sbjct: 219 YNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMP 278

Query: 126 KYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQIS 185
           KYG  PD   Y+ L++G    G ++EAL+  N M      P+ + Y+   KG  +  +  
Sbjct: 279 KYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTM---LCRPNTVCYNAALKGLCIAGRWE 335

Query: 186 GAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLL 245
              ++I +++ K   P+  T++ LI   CQ   VE  +++ E M   G+  +V++Y+ ++
Sbjct: 336 EVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTII 395

Query: 246 SSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRIS 305
           S      R D+AL LL  M     KPD ++++ +++ LCK  + + A++L  +M  K   
Sbjct: 396 SCFSDQARADDALKLLKSMLC---KPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCR 452

Query: 306 PNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQL 365
            N      ++  LC+   + +A   F+ +    C+ D+V Y+ +I+G+ + G    A  L
Sbjct: 453 INEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDL 512

Query: 366 YRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCE 425
           +R +  +     I ++N+ + G C   +  DA  L+  +      P+ VT+   +++ C+
Sbjct: 513 FRSMPCR---ADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQ 569

Query: 426 EGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQIT 485
           +G + R + + ++M    I P   TY  +I G  +Q +L +A++ L  M      PD I+
Sbjct: 570 KGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTIS 626

Query: 486 YNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATY 521
           YN+I++  C+ +  + A +L+ +M   N  P   T+
Sbjct: 627 YNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/501 (23%), Positives = 236/501 (47%), Gaps = 22/501 (4%)

Query: 96  PSVVSLNAIMSRYC-KLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
           P+V+S N ++ + C +   A+  + L    LK     DA S+N L+ G C  GS+ +A E
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLE--ALKASGAADAVSHNTLVAGYCRDGSLGDA-E 170

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
              +  R     + +TY+ L  G+    +++ A ++I  + +    PD  TY  ++ G C
Sbjct: 171 RVVEAARASGTANVVTYTALIDGYCRSGRLADALRLIASMPVA---PDTYTYNTVLKGLC 227

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
                E+  +L   M+      N + ++  + + C++G +D A+ LL +M   G  PD++
Sbjct: 228 CAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVI 287

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
            YS L+ G  +  +V +A++L N M  +   PN+  + A L GLC      E       +
Sbjct: 288 IYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGLCIAGRWEEVGELIAEM 344

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           +  +C  +   ++ +I+   +   +  AV++  Q+ +    P +V++N++I  F    + 
Sbjct: 345 VRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARA 404

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVV 454
            DA +LL ++     +P  +++   +   C+       + L+ +M  K      +T+ ++
Sbjct: 405 DDALKLLKSMLC---KPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNIL 461

Query: 455 IKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNL 514
           I  LC+  ++++A+++ E M      PD +TY+++I  F +      AF L   M     
Sbjct: 462 IDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM----- 516

Query: 515 EPTSA---TYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHK 571
            P  A   +YN  + GLC+     +A  L+  +   +    +V +  +I + C +G V++
Sbjct: 517 -PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNR 575

Query: 572 AMTFFCQMVEKGFEISIRDYT 592
           A+  + QM + G    I  Y 
Sbjct: 576 AIDVYEQMPKYGITPDIFTYN 596



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/384 (22%), Positives = 174/384 (45%), Gaps = 20/384 (5%)

Query: 271 PDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMY 330
           P +++ +ILI+ LC + ++  A ++  E      + ++ +H  ++ G C    + +A   
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVL-EALKASGAADAVSHNTLVAGYCRDGSLGDAERV 172

Query: 331 FDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCK 390
            ++   S    +VV Y  +IDGY + G + +A++L   +    ++P   T+N+++ G C 
Sbjct: 173 VEAARASG-TANVVTYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLKGLCC 228

Query: 391 NGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVT 450
             +   A  L+  +  +   P+ VT+ T + A+C+ G + R + LL++M      P  + 
Sbjct: 229 AKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVII 288

Query: 451 YTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMW 510
           Y+ ++ G  +  ++ EA++LL  M      P+ + YN  ++  C      +  +L+ +M 
Sbjct: 289 YSTLVNGFSEHGRVDEALKLLNTMLC---RPNTVCYNAALKGLCIAGRWEEVGELIAEMV 345

Query: 511 LHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVH 570
             +  P  AT++ LI+ LC N  ++ A  +L  +Q++      V+Y TII     +    
Sbjct: 346 RKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARAD 405

Query: 571 KAMTFFCQMVEKGFEISIRDYTK------------SFFCMMLSNGFPPDQEICEVMLIAF 618
            A+     M+ K   IS     K                 ML      ++    +++ + 
Sbjct: 406 DALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSL 465

Query: 619 HQGGDLGSVFELAAVMIKSGLLPD 642
            Q G +    E+  +M K   +PD
Sbjct: 466 CQNGQVKDAIEVFELMPKYRCMPD 489


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 178/342 (52%)

Query: 192 QKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKS 251
           + +L  G  PDI TY  LI G C+ G +    +L   M  +G + NVI Y++L+   CK 
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62

Query: 252 GRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAH 311
           GR++EA  +L EM   GL  + V Y+ LI  LCK +KV  A+ ++ +M SK   P+ F  
Sbjct: 63  GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122

Query: 312 GAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIE 371
            +++ GLC+     EA   +  +++   I + + YN +I  +++ G + EA++L   ++ 
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182

Query: 372 KRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQR 431
           +      +T+N LI   C+ G +     L + +   GL P+ ++    +N  C  GNIQ 
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 242

Query: 432 LLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIR 491
            L  L++M  + + P  VTY  +I GLCK  + QEA+ L + + V G+ PD ITYNT+I 
Sbjct: 243 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 302

Query: 492 SFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGD 533
             CK      A  LL++       P   T+ IL+      GD
Sbjct: 303 WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 188/344 (54%)

Query: 225 LREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLC 284
           + E MLS G   ++  Y+ L+  +CK G +  A  L+ EM+  G +P+++TY+ILI   C
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 285 KQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVV 344
           K+ ++ +A  + +EM  K ++ N+  +  ++  LC+ E + +A   F  +    C  D+ 
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 345 LYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTI 404
            +N +I G  K+    EA+ LY+ ++ + +  + +T+N+LI+ F + G + +A +L++ +
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180

Query: 405 KLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKL 464
              G     +TY   + A C  GNI++ LAL ++M +K + P +++  ++I GLC+   +
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240

Query: 465 QEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNIL 524
           Q A++ L DM   G+TPD +TYN++I   CK    ++A  L +++ +  + P + TYN L
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 300

Query: 525 IDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGD 568
           I   C  G   +A  LL    +      +V +  ++     EGD
Sbjct: 301 ISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 180/336 (53%)

Query: 163 GVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEG 222
           G  PD  TY+ L  G      +  A +++ ++ IKG +P+++TYT+LI  +C+ G +EE 
Sbjct: 9   GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 68

Query: 223 LKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRG 282
             + + M  +G  LN + Y+ L+S++CK  ++ +AL +  +M + G KPD+ T++ LI G
Sbjct: 69  RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 128

Query: 283 LCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQD 342
           LCK +K  +A+ LY +M  + +  N+  +  ++     +  + EA    + ++   C  D
Sbjct: 129 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLD 188

Query: 343 VVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLD 402
            + YN +I    + GNI + + L+  ++ K ++P+ ++ N LI G C+ G +  A   L 
Sbjct: 189 DITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR 248

Query: 403 TIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQW 462
            +   GL P  VTY + +N  C+ G  Q  L L  +++ + I P  +TY  +I   CK+ 
Sbjct: 249 DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG 308

Query: 463 KLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKD 498
              +A  LL      G  P+++T+  ++ +F K  D
Sbjct: 309 MFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 180/332 (54%), Gaps = 3/332 (0%)

Query: 30  SIQTYNSLLYNLRHTDIM---WDLYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFL 86
            I TYN+L+  L     +    +L +++++     NV T +I+ID  C++ RL++A   L
Sbjct: 13  DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 72

Query: 87  QETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIA 146
            E +GK    + V  N ++S  CK    + A  +F  M   G  PD F++N LI GLC  
Sbjct: 73  DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 132

Query: 147 GSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTY 206
              EEAL    DM   GV  + ITY+ L   F     +  A K++  +L +G   D +TY
Sbjct: 133 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 192

Query: 207 TVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEA 266
             LI   C+ GN+E+GL L E M+S+G   N I+ ++L++ +C++G I  AL  L +M  
Sbjct: 193 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 252

Query: 267 VGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITE 326
            GL PD+VTY+ LI GLCK  +  +A+ L++++  + I P++  +  ++   C++ M  +
Sbjct: 253 RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDD 312

Query: 327 ARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGN 358
           A +     + S  I + V + I++  ++K G+
Sbjct: 313 AHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 160/321 (49%)

Query: 264 MEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEM 323
           M +VG  PD+ TY+ LI GLCK+  +  A +L NEM  K   PN   +  ++   C++  
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 324 ITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNS 383
           + EAR   D +       + V YN +I    K   + +A+ ++  +  K   P I TFNS
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 384 LIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLALLQEMETKA 443
           LI+G CK  K  +A  L   + L G+  + +TY T ++A+   G +Q  L L+ +M  + 
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 444 IGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCKCKDLRKAF 503
                +TY  +IK LC+   +++ + L EDM   G+ P+ I+ N +I   C+  +++ A 
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244

Query: 504 QLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVAYTTIIKAH 563
           + L  M    L P   TYN LI+GLC  G  + A  L   LQ   I    + Y T+I  H
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304

Query: 564 CAEGDVHKAMTFFCQMVEKGF 584
           C EG    A     + V+ GF
Sbjct: 305 CKEGMFDDAHLLLSRGVDSGF 325



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 169/334 (50%)

Query: 95  GPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSMEEALE 154
           GP + + N ++   CK G+   A+ L   M   G  P+  +Y ILI   C  G +EEA  
Sbjct: 11  GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 70

Query: 155 FTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVLICGYC 214
             ++M   G+  +A+ Y+ L        ++  A  +   +  KG  PDI T+  LI G C
Sbjct: 71  VLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLC 130

Query: 215 QIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLV 274
           ++   EE L L + ML +G   N I Y+ L+ +  + G + EAL L+ +M   G   D +
Sbjct: 131 KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDI 190

Query: 275 TYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSL 334
           TY+ LI+ LC+   + K + L+ +M SK ++PN+ +   ++ GLC    I  A  +   +
Sbjct: 191 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 250

Query: 335 IMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKV 394
           I      D+V YN +I+G  K G   EA+ L+ +L  + I P  +T+N+LI   CK G  
Sbjct: 251 IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMF 310

Query: 395 ADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGN 428
            DA  LL      G  P+ VT+   ++ + +EG+
Sbjct: 311 DDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 175/331 (52%)

Query: 62  NVYTNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLF 121
           +++T + +I GLC++  L  A   + E   K   P+V++   ++ R+CK G  E A+ + 
Sbjct: 13  DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 72

Query: 122 CLMLKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLL 181
             M   GL  +A  YN LI  LC    +++AL    DM   G +PD  T++ L  G   +
Sbjct: 73  DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 132

Query: 182 SQISGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAY 241
           ++   A  + Q +L++G   + +TY  LI  + + G ++E LKL   ML +G  L+ I Y
Sbjct: 133 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 192

Query: 242 SVLLSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCS 301
           + L+ ++C++G I++ L L  +M + GL P+ ++ +ILI GLC+   +  A++   +M  
Sbjct: 193 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 252

Query: 302 KRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGE 361
           + ++P+   + +++ GLC+     EA   FD L +     D + YN +I  + K G   +
Sbjct: 253 RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDD 312

Query: 362 AVQLYRQLIEKRISPSIVTFNSLIYGFCKNG 392
           A  L  + ++    P+ VT+  L+  F K G
Sbjct: 313 AHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 167/344 (48%), Gaps = 15/344 (4%)

Query: 295 LYNEMCSKRISPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYV 354
           ++  M S    P+ F +  ++LGLC+K  +  AR   + + +  C  +V+ Y I+ID + 
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 355 KLGNIGEAVQLYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAV 414
           K G + EA  +  ++  K ++ + V +N LI   CK+ KV DA  +   +   G +P   
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 415 TYTTFMNAYCEEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDM 474
           T+ + +   C+    +  L L Q+M  + +    +TY  +I    ++  +QEA++L+ DM
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180

Query: 475 YVIGVTPDQITYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDL 534
              G   D ITYN +I++ C+  ++ K   L   M    L P + + NILI+GLC  G++
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240

Query: 535 KNADCLLVSLQEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTK- 593
           ++A   L  +    ++   V Y ++I   C  G   +A+  F ++  +G       Y   
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 300

Query: 594 -SFFC---------MMLS----NGFPPDQEICEVMLIAFHQGGD 623
            S+ C         ++LS    +GF P++    +++  F + GD
Sbjct: 301 ISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 129/278 (46%), Gaps = 20/278 (7%)

Query: 365 LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 424
           ++  ++     P I T+N+LI G CK G +  AR L++ +++ G EP+ +TYT  ++ +C
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 425 EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 484
           +EG ++    +L EM  K +    V Y  +I  LCK  K+Q+A+ +  DM   G  PD  
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 485 TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 544
           T+N++I   CK     +A  L   M L  +   + TYN LI      G ++ A  L+  +
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180

Query: 545 QEHNISLTKVAYTTIIKAHCAEGDVHKAMTFFCQMVEKGFEISIRDYTKSFFCMMLSNGF 604
                 L  + Y  +IKA C  G++ K +  F  M+ KG                     
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLN------------------- 221

Query: 605 PPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPD 642
            P+   C +++    + G++    E    MI  GL PD
Sbjct: 222 -PNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPD 258



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 3/244 (1%)

Query: 12  VHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSI 68
           V DA+ +   M     K  I T+NSL++ L   +   +   LY D+ +     N  T + 
Sbjct: 100 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 159

Query: 69  VIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYG 128
           +I    ++  +Q+A+  + +   +      ++ N ++   C+ G  E    LF  M+  G
Sbjct: 160 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 219

Query: 129 LHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAW 188
           L+P+  S NILI+GLC  G+++ ALEF  DM   G+ PD +TY+ L  G     +   A 
Sbjct: 220 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 279

Query: 189 KVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSM 248
            +  KL ++G  PD +TY  LI  +C+ G  ++   L    +  GF  N + + +L+S+ 
Sbjct: 280 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 339

Query: 249 CKSG 252
            K G
Sbjct: 340 IKEG 343



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 3/191 (1%)

Query: 33  TYNSLLYNLRHTDIMWD---LYDDIKVSETPRNVYTNSIVIDGLCQQSRLQDAILFLQET 89
           TYN+L++       M +   L +D+     P +  T + +I  LC+   ++  +   ++ 
Sbjct: 156 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 215

Query: 90  AGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKYGLHPDAFSYNILIHGLCIAGSM 149
             K   P+ +S N +++  C+ G  + A      M+  GL PD  +YN LI+GLC  G  
Sbjct: 216 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 275

Query: 150 EEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLLIKGSDPDIVTYTVL 209
           +EAL   + +   G+ PDAITY+ L            A  ++ + +  G  P+ VT+ +L
Sbjct: 276 QEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 335

Query: 210 ICGYCQIGNVE 220
           +  + + G+ E
Sbjct: 336 VSNFIKEGDQE 346



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 53/143 (37%), Gaps = 32/143 (22%)

Query: 8   RTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVYTNS 67
           RTG +  A+  +  M    L   I TYNSL                              
Sbjct: 236 RTGNIQHALEFLRDMIHRGLTPDIVTYNSL------------------------------ 265

Query: 68  IVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLMLKY 127
             I+GLC+  R Q+A+    +   +   P  ++ N ++S +CK G  + A  L    +  
Sbjct: 266 --INGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDS 323

Query: 128 GLHPDAFSYNILIHGLCIAGSME 150
           G  P+  ++ IL+      G  E
Sbjct: 324 GFIPNEVTWYILVSNFIKEGDQE 346


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.139    0.414 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,603,122,555
Number of Sequences: 23463169
Number of extensions: 384663488
Number of successful extensions: 1406309
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8162
Number of HSP's successfully gapped in prelim test: 4732
Number of HSP's that attempted gapping in prelim test: 1082305
Number of HSP's gapped (non-prelim): 99944
length of query: 647
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 498
effective length of database: 8,863,183,186
effective search space: 4413865226628
effective search space used: 4413865226628
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 80 (35.4 bits)